-- dump date 20140619_065523 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003002374.1 251787653 8120193 35..1429 1 NC_012912.1 KEGG: eca:ECA4441 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 1429 8120193 Dd1591_0001 Dickeya zeae Ech1591 chromosomal replication initiator protein DnaA YP_003002374.1 35 D 561229 CDS YP_003002375.1 251787654 8118947 1434..2534 1 NC_012912.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2534 8118947 Dd1591_0002 Dickeya zeae Ech1591 DNA polymerase III subunit beta YP_003002375.1 1434 D 561229 CDS YP_003002376.1 251787655 8118948 2675..3760 1 NC_012912.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3760 recF 8118948 recF Dickeya zeae Ech1591 recombination protein F YP_003002376.1 2675 D 561229 CDS YP_003002377.1 251787656 8118949 3778..6189 1 NC_012912.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 6189 gyrB 8118949 gyrB Dickeya zeae Ech1591 DNA gyrase subunit B YP_003002377.1 3778 D 561229 CDS YP_003002378.1 251787657 8118950 complement(6266..7450) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4437 MFS efflux transporter; major facilitator superfamily protein 7450 8118950 Dd1591_0005 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003002378.1 6266 R 561229 CDS YP_003002379.1 251787658 8118951 complement(7640..8392) 1 NC_012912.1 predicted SAM-dependent methyltransferase; putative methyltransferase 8392 8118951 Dd1591_0006 Dickeya zeae Ech1591 putative methyltransferase YP_003002379.1 7640 R 561229 CDS YP_003002380.1 251787659 8118952 complement(8389..10431) 1 NC_012912.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: eca:ECA0055 oligopeptidase A; oligopeptidase A 10431 8118952 Dd1591_0007 Dickeya zeae Ech1591 oligopeptidase A YP_003002380.1 8389 R 561229 CDS YP_003002381.1 251787660 8118953 complement(10557..10841) 1 NC_012912.1 KEGG: eca:ECA0060 hypothetical protein; hypothetical protein 10841 8118953 Dd1591_0008 Dickeya zeae Ech1591 hypothetical protein YP_003002381.1 10557 R 561229 CDS YP_003002382.1 251787661 8118954 11228..12070 1 NC_012912.1 PFAM: protein of unknown function DUF519; KEGG: eca:ECA0061 hypothetical protein; hypothetical protein 12070 8118954 Dd1591_0009 Dickeya zeae Ech1591 hypothetical protein YP_003002382.1 11228 D 561229 CDS YP_003002383.1 251787662 8118955 complement(12106..13020) 1 NC_012912.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 13020 8118955 Dd1591_0010 Dickeya zeae Ech1591 ribonuclease Z YP_003002383.1 12106 R 561229 CDS YP_003002384.1 251787663 8118956 complement(13031..14620) 1 NC_012912.1 PFAM: regulator of RNA terminal phosphate cyclase; sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: esa:ESA_00062 hypothetical protein; Sigma 54 interacting domain-containing protein 14620 8118956 Dd1591_0011 Dickeya zeae Ech1591 Sigma 54 interacting domain-containing protein YP_003002384.1 13031 R 561229 CDS YP_003002385.1 251787664 8118957 14875..15768 1 NC_012912.1 PFAM: band 7 protein; KEGG: ect:ECIAI39_4422 hypothetical protein; hypothetical protein 15768 8118957 Dd1591_0012 Dickeya zeae Ech1591 hypothetical protein YP_003002385.1 14875 D 561229 CDS YP_003002386.1 251787665 8118958 15836..17059 1 NC_012912.1 PFAM: protein of unknown function UPF0027; KEGG: plu:plu4307 protein RtcB; hypothetical protein 17059 8118958 Dd1591_0013 Dickeya zeae Ech1591 hypothetical protein YP_003002386.1 15836 D 561229 CDS YP_003002387.1 251787666 8118959 17448..18800 1 NC_012912.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 18800 8118959 Dd1591_0014 Dickeya zeae Ech1591 glutathione reductase YP_003002387.1 17448 D 561229 CDS YP_003002388.1 251787667 8118960 19275..20690 1 NC_012912.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: esa:ESA_00303 hypothetical protein; membrane bound O-acyl transferase MBOAT family protein 20690 8118960 Dd1591_0015 Dickeya zeae Ech1591 membrane bound O-acyl transferase MBOAT family protein YP_003002388.1 19275 D 561229 CDS YP_003002389.1 251787668 8118961 20677..21735 1 NC_012912.1 KEGG: esa:ESA_00304 hypothetical protein; hypothetical protein 21735 8118961 Dd1591_0016 Dickeya zeae Ech1591 hypothetical protein YP_003002389.1 20677 D 561229 CDS YP_003002390.1 251787669 8118962 21773..22951 1 NC_012912.1 KEGG: esa:ESA_00305 hypothetical protein; hypothetical protein 22951 8118962 Dd1591_0017 Dickeya zeae Ech1591 hypothetical protein YP_003002390.1 21773 D 561229 CDS YP_003002391.1 251787670 8118963 complement(22994..23641) 1 NC_012912.1 PFAM: protein of unknown function DUF161; KEGG: ppu:PP_0642 hypothetical protein; hypothetical protein 23641 8118963 Dd1591_0018 Dickeya zeae Ech1591 hypothetical protein YP_003002391.1 22994 R 561229 CDS YP_003002392.1 251787671 8118964 23842..24312 1 NC_012912.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: reu:Reut_C6217 AsnC family transcriptional regulator; AsnC family transcriptional regulator 24312 8118964 Dd1591_0019 Dickeya zeae Ech1591 AsnC family transcriptional regulator YP_003002392.1 23842 D 561229 CDS YP_003002393.1 251787672 8118965 complement(24315..25436) 1 NC_012912.1 PFAM: aminotransferase class V; KEGG: pzu:PHZ_c3273 phosphoserine aminotransferase; aminotransferase class V 25436 8118965 Dd1591_0020 Dickeya zeae Ech1591 aminotransferase class V YP_003002393.1 24315 R 561229 CDS YP_003002394.1 251787673 8118966 25671..26108 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_2129 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 26108 8118966 Dd1591_0021 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003002394.1 25671 D 561229 CDS YP_003002395.1 251787674 8118967 complement(26161..26601) 1 NC_012912.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dac:Daci_0312 MarR family transcriptional regulator; MarR family transcriptional regulator 26601 8118967 Dd1591_0022 Dickeya zeae Ech1591 MarR family transcriptional regulator YP_003002395.1 26161 R 561229 CDS YP_003002396.1 251787675 8118968 26710..27000 1 NC_012912.1 KEGG: ypg:YpAngola_A3875 hypothetical protein; hypothetical protein 27000 8118968 Dd1591_0023 Dickeya zeae Ech1591 hypothetical protein YP_003002396.1 26710 D 561229 CDS YP_003002397.1 251787676 8118969 27141..28109 1 NC_012912.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 28109 glk 8118969 glk Dickeya zeae Ech1591 glucokinase YP_003002397.1 27141 D 561229 CDS YP_003002398.1 251787677 8118970 complement(28518..29405) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_0574 LysR family transcriptional regulator; LysR family transcriptional regulator 29405 8118970 Dd1591_0025 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003002398.1 28518 R 561229 CDS YP_003002399.1 251787678 8118971 29507..30526 1 NC_012912.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nar:Saro_1864 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 30526 8118971 Dd1591_0026 Dickeya zeae Ech1591 alcohol dehydrogenase zinc-binding domain-containing protein YP_003002399.1 29507 D 561229 CDS YP_003002400.1 251787679 8118973 complement(31185..32303) 1 NC_012912.1 TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: eca:ECA0070 hypothetical protein; hypothetical protein 32303 8118973 Dd1591_0028 Dickeya zeae Ech1591 hypothetical protein YP_003002400.1 31185 R 561229 CDS YP_003002401.1 251787680 8118974 complement(32300..33340) 1 NC_012912.1 PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA0071 putative monooxygenase; Luciferase-like monooxygenase 33340 8118974 Dd1591_0029 Dickeya zeae Ech1591 Luciferase-like monooxygenase YP_003002401.1 32300 R 561229 CDS YP_003002402.1 251787681 8118975 complement(33343..35019) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0072 ABC transporter ATP-binding protein; ABC transporter 35019 8118975 Dd1591_0030 Dickeya zeae Ech1591 ABC transporter YP_003002402.1 33343 R 561229 CDS YP_003002403.1 251787682 8118976 complement(35016..35876) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0073 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 35876 8118976 Dd1591_0031 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003002403.1 35016 R 561229 CDS YP_003002404.1 251787683 8118977 complement(35878..36819) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0074 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 36819 8118977 Dd1591_0032 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003002404.1 35878 R 561229 CDS YP_003002405.1 251787684 8118978 complement(36844..38487) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0075 ABC-type transporter, substrate binding protein; extracellular solute-binding protein family 5 38487 8118978 Dd1591_0033 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003002405.1 36844 R 561229 CDS YP_003002406.1 251787685 8118979 38815..39066 1 NC_012912.1 PFAM: protein of unknown function DUF1471; KEGG: plu:plu4502 hypothetical protein; hypothetical protein 39066 8118979 Dd1591_0034 Dickeya zeae Ech1591 hypothetical protein YP_003002406.1 38815 D 561229 CDS YP_003002407.1 251787686 8118980 complement(39224..40480) 1 NC_012912.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 40480 avtA 8118980 avtA Dickeya zeae Ech1591 valine--pyruvate transaminase YP_003002407.1 39224 R 561229 CDS YP_003002408.1 251787687 8118981 40873..42081 1 NC_012912.1 KEGG: eca:ECA4385 hypothetical protein; hypothetical protein 42081 8118981 Dd1591_0036 Dickeya zeae Ech1591 hypothetical protein YP_003002408.1 40873 D 561229 CDS YP_003002409.1 251787688 8118982 42201..42482 1 NC_012912.1 PFAM: virulence-associated protein D (VapD) conserved region; KEGG: hsm:HSM_1448 virulence-associated protein D (VapD) region; virulence-associated protein D (VapD) conserved region 42482 8118982 Dd1591_0037 Dickeya zeae Ech1591 virulence-associated protein D (VapD) conserved region YP_003002409.1 42201 D 561229 CDS YP_003002410.1 251787689 8118983 complement(42542..43504) 1 NC_012912.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: eca:ECA0078 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 43504 8118983 Dd1591_0038 Dickeya zeae Ech1591 D-isomer specific 2-hydroxyacid dehydrogenase YP_003002410.1 42542 R 561229 CDS YP_003002411.1 251787690 8118984 complement(44061..44516) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0081 hypothetical protein; GCN5-related N-acetyltransferase 44516 8118984 Dd1591_0039 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003002411.1 44061 R 561229 CDS YP_003002412.1 251787691 8118985 complement(44513..45073) 1 NC_012912.1 KEGG: eca:ECA0082 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 45073 8118985 Dd1591_0040 Dickeya zeae Ech1591 DNA-3-methyladenine glycosylase I YP_003002412.1 44513 R 561229 CDS YP_003002413.1 251787692 8118986 45311..46117 1 NC_012912.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA0083 hypothetical protein; hypothetical protein 46117 8118986 Dd1591_0041 Dickeya zeae Ech1591 hypothetical protein YP_003002413.1 45311 D 561229 CDS YP_003002414.1 251787693 8118987 46262..47176 1 NC_012912.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 47176 glyQ 8118987 glyQ Dickeya zeae Ech1591 glycyl-tRNA synthetase subunit alpha YP_003002414.1 46262 D 561229 CDS YP_003002415.1 251787694 8118988 47186..49270 1 NC_012912.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 49270 glyS 8118988 glyS Dickeya zeae Ech1591 glycyl-tRNA synthetase subunit beta YP_003002415.1 47186 D 561229 CDS YP_003002416.1 251787695 8118989 complement(49378..50379) 1 NC_012912.1 KEGG: par:Psyc_1209 hypothetical protein; hypothetical protein 50379 8118989 Dd1591_0044 Dickeya zeae Ech1591 hypothetical protein YP_003002416.1 49378 R 561229 CDS YP_003002417.1 251787696 8118990 complement(50811..54404) 1 NC_012912.1 KEGG: cja:CJA_2723 UreA amidolyase homolog; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase 54404 8118990 Dd1591_0045 Dickeya zeae Ech1591 urea carboxylase YP_003002417.1 50811 R 561229 CDS YP_003002418.1 251787697 8118991 complement(54504..55139) 1 NC_012912.1 TIGRFAM: urea carboxylase-associated protein 1; KEGG: abo:ABO_1891 hypothetical protein; urea carboxylase-associated protein 1 55139 8118991 Dd1591_0046 Dickeya zeae Ech1591 urea carboxylase-associated protein 1 YP_003002418.1 54504 R 561229 CDS YP_003002419.1 251787698 8118992 complement(55142..55861) 1 NC_012912.1 TIGRFAM: urea carboxylase-associated protein 2; KEGG: sde:Sde_1125 5'-3' exonuclease; urea carboxylase-associated protein 2 55861 8118992 Dd1591_0047 Dickeya zeae Ech1591 urea carboxylase-associated protein 2 YP_003002419.1 55142 R 561229 CDS YP_003002420.1 251787699 8118993 complement(55879..56658) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_3976 ABC transporter related; ABC transporter 56658 8118993 Dd1591_0048 Dickeya zeae Ech1591 ABC transporter YP_003002420.1 55879 R 561229 CDS YP_003002421.1 251787700 8118994 complement(56686..57498) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cja:CJA_2719 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 57498 8118994 Dd1591_0049 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003002421.1 56686 R 561229 CDS YP_003002422.1 251787701 8118995 complement(57515..58570) 1 NC_012912.1 TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; KEGG: cja:CJA_2718 ABC transporter, periplasmic substrate-binding protein; ABC transporter substrate-binding protein 58570 8118995 Dd1591_0050 Dickeya zeae Ech1591 ABC transporter substrate-binding protein YP_003002422.1 57515 R 561229 CDS YP_003002423.1 251787702 8118996 59268..59978 1 NC_012912.1 KEGG: eca:ECA0086 hypothetical protein; hypothetical protein 59978 8118996 Dd1591_0051 Dickeya zeae Ech1591 hypothetical protein YP_003002423.1 59268 D 561229 CDS YP_003002424.1 251787703 8118997 60459..62366 1 NC_012912.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA0087 PTS system, mannitol-specific IIABC component; PTS system mannitol-specific transporter subunit IIC 62366 8118997 Dd1591_0052 Dickeya zeae Ech1591 PTS system mannitol-specific transporter subunit IIC YP_003002424.1 60459 D 561229 CDS YP_003002425.1 251787704 8118998 62439..63590 1 NC_012912.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0088 mannitol-1-phosphate 5-dehydrogenase; mannitol-1-phosphate 5-dehydrogenase 63590 8118998 Dd1591_0053 Dickeya zeae Ech1591 mannitol-1-phosphate 5-dehydrogenase YP_003002425.1 62439 D 561229 CDS YP_003002426.1 251787705 8118999 63676..64281 1 NC_012912.1 Acts as a repressor of the mtlAD operon; mannitol repressor protein 64281 mtlR 8118999 mtlR Dickeya zeae Ech1591 mannitol repressor protein YP_003002426.1 63676 D 561229 CDS YP_003002427.1 251787706 8119000 complement(64373..66259) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0091 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 66259 8119000 Dd1591_0055 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003002427.1 64373 R 561229 CDS YP_003002428.1 251787707 8119001 complement(66717..67343) 1 NC_012912.1 PFAM: manganese and iron superoxide dismutase; KEGG: eca:ECA0092 superoxide dismutase; Superoxide dismutase 67343 8119001 Dd1591_0056 Dickeya zeae Ech1591 Superoxide dismutase YP_003002428.1 66717 R 561229 CDS YP_003002429.1 251787708 8119002 complement(67614..68432) 1 NC_012912.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 68432 8119002 Dd1591_0057 Dickeya zeae Ech1591 formate dehydrogenase accessory protein YP_003002429.1 67614 R 561229 CDS YP_003002430.1 251787709 8119003 68798..70333 1 NC_012912.1 PFAM: Aldehyde Dehydrogenase; KEGG: eca:ECA0094 aldehyde dehydrogenase B; aldehyde dehydrogenase (NAD(+)) 70333 8119003 Dd1591_0058 Dickeya zeae Ech1591 aldehyde dehydrogenase (NAD(+)) YP_003002430.1 68798 D 561229 CDS YP_003002431.1 251787710 8119004 complement(70585..72045) 1 NC_012912.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: eca:ECA0096 xylulose kinase; xylulokinase 72045 8119004 Dd1591_0059 Dickeya zeae Ech1591 xylulokinase YP_003002431.1 70585 R 561229 CDS YP_003002432.1 251787711 8119005 complement(72167..73486) 1 NC_012912.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 73486 8119005 Dd1591_0060 Dickeya zeae Ech1591 xylose isomerase YP_003002432.1 72167 R 561229 CDS YP_003002433.1 251787712 8119006 73978..74973 1 NC_012912.1 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF 74973 xylF 8119006 xylF Dickeya zeae Ech1591 D-xylose transporter subunit XylF YP_003002433.1 73978 D 561229 CDS YP_003002434.1 251787713 8119007 75057..76598 1 NC_012912.1 with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 76598 8119007 Dd1591_0062 Dickeya zeae Ech1591 xylose transporter ATP-binding subunit YP_003002434.1 75057 D 561229 CDS YP_003002435.1 251787714 8119008 76576..77760 1 NC_012912.1 PFAM: inner-membrane translocator; KEGG: eca:ECA0100 xylose transport system permease; inner-membrane translocator 77760 8119008 Dd1591_0063 Dickeya zeae Ech1591 inner-membrane translocator YP_003002435.1 76576 D 561229 CDS YP_003002436.1 251787715 8119009 77949..79178 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA0101 xylose operon regulatory protein; AraC family transcriptional regulator 79178 8119009 Dd1591_0064 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003002436.1 77949 D 561229 CDS YP_003002437.1 251787716 8119010 complement(79299..79874) 1 NC_012912.1 PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA0102 hypothetical protein; ThiJ/PfpI domain-containing protein 79874 8119010 Dd1591_0065 Dickeya zeae Ech1591 ThiJ/PfpI domain-containing protein YP_003002437.1 79299 R 561229 CDS YP_003002438.1 251787717 8119011 complement(80132..80410) 1 NC_012912.1 PFAM: protein of unknown function DUF156; KEGG: asa:ASA_0625 hypothetical protein; hypothetical protein 80410 8119011 Dd1591_0066 Dickeya zeae Ech1591 hypothetical protein YP_003002438.1 80132 R 561229 CDS YP_003002439.1 251787718 8119012 80510..81412 1 NC_012912.1 membrane protein conferring nickel and cobalt resistance; nickel/cobalt efflux protein RcnA 81412 8119012 Dd1591_0067 Dickeya zeae Ech1591 nickel/cobalt efflux protein RcnA YP_003002439.1 80510 D 561229 CDS YP_003002440.1 251787719 8119013 81706..83055 1 NC_012912.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 83055 8119013 Dd1591_0068 Dickeya zeae Ech1591 argininosuccinate synthase YP_003002440.1 81706 D 561229 CDS YP_003002441.1 251787720 8119014 complement(83151..83651) 1 NC_012912.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmn:BMA10247_0906 MarR family transcriptional regulator; MarR family transcriptional regulator 83651 8119014 Dd1591_0069 Dickeya zeae Ech1591 MarR family transcriptional regulator YP_003002441.1 83151 R 561229 CDS YP_003002442.1 251787721 8119015 84008..84874 1 NC_012912.1 TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: ecm:EcSMS35_A0154 drug/metabolite transporter; carboxylate/amino acid/amine transporter 84874 8119015 Dd1591_0070 Dickeya zeae Ech1591 carboxylate/amino acid/amine transporter YP_003002442.1 84008 D 561229 CDS YP_003002443.1 251787722 8119016 85294..86244 1 NC_012912.1 PFAM: Indigoidine synthase A family protein; KEGG: plu:plu2187 hypothetical protein; Indigoidine synthase A family protein 86244 8119016 Dd1591_0071 Dickeya zeae Ech1591 Indigoidine synthase A family protein YP_003002443.1 85294 D 561229 CDS YP_003002444.1 251787723 8119017 86256..86948 1 NC_012912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: plu:plu2182 hypothetical protein; HAD-superfamily hydrolase 86948 8119017 Dd1591_0072 Dickeya zeae Ech1591 HAD-superfamily hydrolase YP_003002444.1 86256 D 561229 CDS YP_003002445.1 251787724 8119018 87246..91565 1 NC_012912.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: plu:plu2186 hypothetical protein; amino acid adenylation domain-containing protein 91565 8119018 Dd1591_0073 Dickeya zeae Ech1591 amino acid adenylation domain-containing protein YP_003002445.1 87246 D 561229 CDS YP_003002446.1 251787725 8119019 91841..92845 1 NC_012912.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0753 hypothetical protein; 3-oxoacyl-ACP synthase III 92845 8119019 Dd1591_0074 Dickeya zeae Ech1591 3-oxoacyl-ACP synthase III YP_003002446.1 91841 D 561229 CDS YP_003002447.1 251787726 8119020 92859..93125 1 NC_012912.1 hypothetical protein 93125 8119020 Dd1591_0075 Dickeya zeae Ech1591 hypothetical protein YP_003002447.1 92859 D 561229 CDS YP_003002448.1 251787727 8117027 93115..93768 1 NC_012912.1 hypothetical protein 93768 8117027 Dd1591_0076 Dickeya zeae Ech1591 hypothetical protein YP_003002448.1 93115 D 561229 CDS YP_003002449.1 251787728 8117028 93787..95145 1 NC_012912.1 KEGG: pfo:Pfl01_3541 multi anti extrusion protein MatE; Na+-driven multidrug efflux pump-like protein 95145 8117028 Dd1591_0077 Dickeya zeae Ech1591 Na+-driven multidrug efflux pump-like protein YP_003002449.1 93787 D 561229 CDS YP_003002450.1 251787729 8117029 95132..96223 1 NC_012912.1 KEGG: pfl:PFL_0267 hypothetical protein; hypothetical protein 96223 8117029 Dd1591_0078 Dickeya zeae Ech1591 hypothetical protein YP_003002450.1 95132 D 561229 CDS YP_003002451.1 251787730 8117030 complement(96288..96851) 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dvl:Dvul_2703 transcription activator, effector binding; AraC family transcriptional regulator 96851 8117030 Dd1591_0079 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003002451.1 96288 R 561229 CDS YP_003002452.1 251787731 8117031 97467..98174 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_2119 ABC transporter, ATP-binding protein; ABC transporter 98174 8117031 Dd1591_0080 Dickeya zeae Ech1591 ABC transporter YP_003002452.1 97467 D 561229 CDS YP_003002453.1 251787732 8117032 98179..100611 1 NC_012912.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_2120 putative ABC transporter, permease protein; hypothetical protein 100611 8117032 Dd1591_0081 Dickeya zeae Ech1591 hypothetical protein YP_003002453.1 98179 D 561229 CDS YP_003002454.1 251787733 8117033 100793..102193 1 NC_012912.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: cps:CPS_2121 sigma-54 dependent DNA-binding response regulator; two component, sigma54 specific, transcriptional regulator, Fis family 102193 8117033 Dd1591_0082 Dickeya zeae Ech1591 two component, sigma54 specific, transcriptional regulator, Fis family YP_003002454.1 100793 D 561229 CDS YP_003002455.1 251787734 8117034 102225..103505 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: cps:CPS_2122 sensor histidine kinase; PAS/PAC sensor signal transduction histidine kinase 103505 8117034 Dd1591_0083 Dickeya zeae Ech1591 PAS/PAC sensor signal transduction histidine kinase YP_003002455.1 102225 D 561229 CDS YP_003002456.1 251787735 8117035 103624..104211 1 NC_012912.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: cbc:CbuK_0411 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 104211 8117035 Dd1591_0084 Dickeya zeae Ech1591 4'-phosphopantetheinyl transferase YP_003002456.1 103624 D 561229 CDS YP_003002457.1 251787736 8117036 complement(104222..104869) 1 NC_012912.1 hypothetical protein 104869 8117036 Dd1591_0085 Dickeya zeae Ech1591 hypothetical protein YP_003002457.1 104222 R 561229 CDS YP_003002458.1 251787737 8117037 complement(105152..106102) 1 NC_012912.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0753 hypothetical protein; 3-oxoacyl-ACP synthase III 106102 8117037 Dd1591_0086 Dickeya zeae Ech1591 3-oxoacyl-ACP synthase III YP_003002458.1 105152 R 561229 CDS YP_003002459.1 251787738 8117038 complement(106102..106959) 1 NC_012912.1 hypothetical protein 106959 8117038 Dd1591_0087 Dickeya zeae Ech1591 hypothetical protein YP_003002459.1 106102 R 561229 CDS YP_003002460.1 251787739 8117039 complement(106943..108079) 1 NC_012912.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: plu:plu0762 hypothetical protein; acyl-CoA dehydrogenase domain-containing protein 108079 8117039 Dd1591_0088 Dickeya zeae Ech1591 acyl-CoA dehydrogenase domain-containing protein YP_003002460.1 106943 R 561229 CDS YP_003002461.1 251787740 8117040 complement(108180..109103) 1 NC_012912.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0753 hypothetical protein; 3-oxoacyl-ACP synthase III 109103 8117040 Dd1591_0089 Dickeya zeae Ech1591 3-oxoacyl-ACP synthase III YP_003002461.1 108180 R 561229 CDS YP_003002462.1 251787741 8117041 complement(109174..109704) 1 NC_012912.1 hypothetical protein 109704 8117041 Dd1591_0090 Dickeya zeae Ech1591 hypothetical protein YP_003002462.1 109174 R 561229 CDS YP_003002463.1 251787742 8117042 complement(109706..110839) 1 NC_012912.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: plu:plu0762 hypothetical protein; acyl-CoA dehydrogenase domain-containing protein 110839 8117042 Dd1591_0091 Dickeya zeae Ech1591 acyl-CoA dehydrogenase domain-containing protein YP_003002463.1 109706 R 561229 CDS YP_003002464.1 251787743 8117043 complement(110836..111267) 1 NC_012912.1 KEGG: pst:PSPTO_4711 coronamic acid synthetase CmaC; hypothetical protein 111267 8117043 Dd1591_0092 Dickeya zeae Ech1591 hypothetical protein YP_003002464.1 110836 R 561229 CDS YP_003002465.1 251787744 8117044 complement(111349..112881) 1 NC_012912.1 PFAM: AMP-dependent synthetase and ligase; KEGG: baa:BA_1915 AMP-binding enzyme; AMP-dependent synthetase and ligase 112881 8117044 Dd1591_0093 Dickeya zeae Ech1591 AMP-dependent synthetase and ligase YP_003002465.1 111349 R 561229 CDS YP_003002466.1 251787745 8117045 complement(112862..114421) 1 NC_012912.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bsu:BSU38500 D-alanine--D-alanyl carrier protein ligase; AMP-dependent synthetase and ligase 114421 8117045 Dd1591_0094 Dickeya zeae Ech1591 AMP-dependent synthetase and ligase YP_003002466.1 112862 R 561229 CDS YP_003002467.1 251787746 8117046 complement(114418..114726) 1 NC_012912.1 hypothetical protein 114726 8117046 Dd1591_0095 Dickeya zeae Ech1591 hypothetical protein YP_003002467.1 114418 R 561229 CDS YP_003002468.1 251787747 8117047 complement(114732..116315) 1 NC_012912.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mll6742 long chain acyl-CoA synthetase; AMP-dependent synthetase and ligase 116315 8117047 Dd1591_0096 Dickeya zeae Ech1591 AMP-dependent synthetase and ligase YP_003002468.1 114732 R 561229 CDS YP_003002469.1 251787748 8117048 complement(116327..117247) 1 NC_012912.1 hypothetical protein 117247 8117048 Dd1591_0097 Dickeya zeae Ech1591 hypothetical protein YP_003002469.1 116327 R 561229 CDS YP_003002470.1 251787749 8117049 complement(117244..118566) 1 NC_012912.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mpo:Mpop_3620 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 118566 8117049 Dd1591_0098 Dickeya zeae Ech1591 Orn/DAP/Arg decarboxylase 2 YP_003002470.1 117244 R 561229 CDS YP_003002471.1 251787750 8117050 complement(118559..118870) 1 NC_012912.1 hypothetical protein 118870 8117050 Dd1591_0099 Dickeya zeae Ech1591 hypothetical protein YP_003002471.1 118559 R 561229 CDS YP_003002472.1 251787751 8117051 119648..120400 1 NC_012912.1 PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: eca:ECA1561 quorum-sensing transcriptional regulator; LuxR family transcriptional regulator 120400 8117051 Dd1591_0100 Dickeya zeae Ech1591 LuxR family transcriptional regulator YP_003002472.1 119648 D 561229 CDS YP_003002473.1 251787752 8117052 complement(120366..121004) 1 NC_012912.1 PFAM: autoinducer synthesis protein; KEGG: eca:ECA0105 N-acylhomoserine lactone synthesis protein; Acyl-homoserine-lactone synthase 121004 8117052 Dd1591_0101 Dickeya zeae Ech1591 Acyl-homoserine-lactone synthase YP_003002473.1 120366 R 561229 CDS YP_003002474.1 251787753 8117053 121713..121958 1 NC_012912.1 PFAM: protein of unknown function DUF1471; KEGG: elf:LF82_0232 UPF0379 protein YcfR; hypothetical protein 121958 8117053 Dd1591_0102 Dickeya zeae Ech1591 hypothetical protein YP_003002474.1 121713 D 561229 CDS YP_003002475.1 251787754 8117054 complement(122258..123028) 1 NC_012912.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: eca:ECA4272 triosephosphate isomerase; triosephosphate isomerase 123028 8117054 Dd1591_0103 Dickeya zeae Ech1591 triosephosphate isomerase YP_003002475.1 122258 R 561229 CDS YP_003002476.1 251787755 8117055 complement(123170..123796) 1 NC_012912.1 PFAM: protein of unknown function DUF1454; KEGG: eca:ECA4271 hypothetical protein; hypothetical protein 123796 8117055 Dd1591_0104 Dickeya zeae Ech1591 hypothetical protein YP_003002476.1 123170 R 561229 CDS YP_003002477.1 251787756 8117056 123909..124334 1 NC_012912.1 PFAM: protein of unknown function DUF805; KEGG: eca:ECA4270 hypothetical protein; hypothetical protein 124334 8117056 Dd1591_0105 Dickeya zeae Ech1591 hypothetical protein YP_003002477.1 123909 D 561229 CDS YP_003002478.1 251787757 8117057 complement(124348..125094) 1 NC_012912.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: esa:ESA_03881 ferredoxin-NADP reductase; ferredoxin-NADP reductase 125094 8117057 Dd1591_0106 Dickeya zeae Ech1591 ferredoxin-NADP reductase YP_003002478.1 124348 R 561229 CDS YP_003002479.1 251787758 8117058 complement(125203..126213) 1 NC_012912.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 126213 glpX 8117058 glpX Dickeya zeae Ech1591 fructose 1,6-bisphosphatase II YP_003002479.1 125203 R 561229 CDS YP_003002480.1 251787759 8117059 complement(126345..127856) 1 NC_012912.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: eca:ECA4267 glycerol kinase; glycerol kinase 127856 8117059 Dd1591_0108 Dickeya zeae Ech1591 glycerol kinase YP_003002480.1 126345 R 561229 CDS YP_003002481.1 251787760 8117060 complement(127884..128735) 1 NC_012912.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: eca:ECA4266 glycerol uptake facilitator protein; MIP family channel protein 128735 8117060 Dd1591_0109 Dickeya zeae Ech1591 MIP family channel protein YP_003002481.1 127884 R 561229 CDS YP_003002482.1 251787761 8117061 129345..129587 1 NC_012912.1 PFAM: protein of unknown function DUF904; KEGG: eca:ECA4265 hypothetical protein; hypothetical protein 129587 8117061 Dd1591_0110 Dickeya zeae Ech1591 hypothetical protein YP_003002482.1 129345 D 561229 CDS YP_003002483.1 251787762 8117062 complement(129652..130137) 1 NC_012912.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 130137 8117062 Dd1591_0111 Dickeya zeae Ech1591 ribonuclease activity regulator protein RraA YP_003002483.1 129652 R 561229 CDS YP_003002484.1 251787763 8117063 complement(130286..131203) 1 NC_012912.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 131203 8117063 Dd1591_0112 Dickeya zeae Ech1591 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003002484.1 130286 R 561229 CDS YP_003002485.1 251787764 8117064 complement(131359..132690) 1 NC_012912.1 KEGG: eca:ECA4262 ATP-dependent protease ATP-binding subunit; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 132690 8117064 Dd1591_0113 Dickeya zeae Ech1591 heat shock protein HslVU, ATPase subunit HslU YP_003002485.1 131359 R 561229 CDS YP_003002486.1 251787765 8117065 complement(132701..133231) 1 NC_012912.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 133231 8117065 Dd1591_0114 Dickeya zeae Ech1591 ATP-dependent protease peptidase subunit YP_003002486.1 132701 R 561229 CDS YP_003002487.1 251787766 8117066 complement(133317..134156) 1 NC_012912.1 TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain protein; KEGG: eca:ECA4260 cell division protein FtsN; cell division protein FtsN 134156 8117066 Dd1591_0115 Dickeya zeae Ech1591 cell division protein FtsN YP_003002487.1 133317 R 561229 CDS YP_003002488.1 251787767 8117067 complement(134307..135377) 1 NC_012912.1 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR 135377 8117067 Dd1591_0116 Dickeya zeae Ech1591 DNA-binding transcriptional regulator CytR YP_003002488.1 134307 R 561229 CDS YP_003002489.1 251787768 8117068 complement(135682..137880) 1 NC_012912.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 137880 8117068 Dd1591_0117 Dickeya zeae Ech1591 primosome assembly protein PriA YP_003002489.1 135682 R 561229 CDS YP_003002490.1 251787769 8117069 138156..138371 1 NC_012912.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: stm:STM4096 50S ribosomal protein L31; 50S ribosomal protein L31 138371 8117069 Dd1591_0118 Dickeya zeae Ech1591 50S ribosomal protein L31 YP_003002490.1 138156 D 561229 CDS YP_003002491.1 251787770 8117070 complement(138486..138803) 1 NC_012912.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 138803 8117070 Dd1591_0119 Dickeya zeae Ech1591 transcriptional repressor protein MetJ YP_003002491.1 138486 R 561229 CDS YP_003002492.1 251787771 8117071 138992..140152 1 NC_012912.1 KEGG: eca:ECA4252 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase 140152 8117071 Dd1591_0120 Dickeya zeae Ech1591 O-succinylhomoserine (thiol)-lyase YP_003002492.1 138992 D 561229 CDS YP_003002493.1 251787772 8117072 140155..142590 1 NC_012912.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 142590 metL 8117072 metL Dickeya zeae Ech1591 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_003002493.1 140155 D 561229 CDS YP_003002494.1 251787773 8117073 complement(142761..143684) 1 NC_012912.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B0832 putative oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 143684 8117073 Dd1591_0122 Dickeya zeae Ech1591 alcohol dehydrogenase zinc-binding domain-containing protein YP_003002494.1 142761 R 561229 CDS YP_003002495.1 251787774 8117074 complement(143894..144568) 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: ara:Arad_2384 transcriptional regulator protein; TetR family transcriptional regulator 144568 8117074 Dd1591_0123 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003002495.1 143894 R 561229 CDS YP_003002496.1 251787775 8117075 144635..144739 1 NC_012912.1 hypothetical protein 144739 8117075 Dd1591_0124 Dickeya zeae Ech1591 hypothetical protein YP_003002496.1 144635 D 561229 CDS YP_003002497.1 251787776 8117076 144961..145857 1 NC_012912.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 145857 metF 8117076 metF Dickeya zeae Ech1591 5,10-methylenetetrahydrofolate reductase YP_003002497.1 144961 D 561229 CDS YP_003002498.1 251787777 8117077 complement(145981..146712) 1 NC_012912.1 TIGRFAM: glutaredoxin-family domain protein; PFAM: Redoxin domain protein; glutaredoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: yen:YE0132 putative peroxiredoxin/glutaredoxin family protein; glutaredoxin-family domain-containing protein 146712 8117077 Dd1591_0126 Dickeya zeae Ech1591 glutaredoxin-family domain-containing protein YP_003002498.1 145981 R 561229 CDS YP_003002499.1 251787778 8117078 146874..147791 1 NC_012912.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 147791 8117078 Dd1591_0127 Dickeya zeae Ech1591 DNA-binding transcriptional regulator OxyR YP_003002499.1 146874 D 561229 CDS YP_003002500.1 251787779 8117079 complement(147876..149282) 1 NC_012912.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 149282 8117079 Dd1591_0128 Dickeya zeae Ech1591 soluble pyridine nucleotide transhydrogenase YP_003002500.1 147876 R 561229 CDS YP_003002501.1 251787780 8117080 149465..150121 1 NC_012912.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 150121 8117080 Dd1591_0129 Dickeya zeae Ech1591 DNA-binding transcriptional repressor FabR YP_003002501.1 149465 D 561229 CDS YP_003002502.1 251787781 8117081 150136..150510 1 NC_012912.1 PFAM: protein of unknown function DUF1422; KEGG: eca:ECA4240 hypothetical protein; hypothetical protein 150510 8117081 Dd1591_0130 Dickeya zeae Ech1591 hypothetical protein YP_003002502.1 150136 D 561229 CDS YP_003002503.1 251787782 8117082 complement(150523..151626) 1 NC_012912.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 151626 8117082 Dd1591_0131 Dickeya zeae Ech1591 tRNA (uracil-5-)-methyltransferase YP_003002503.1 150523 R 561229 CDS YP_003002504.1 251787783 8117083 152049..153944 1 NC_012912.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 153944 btuB 8117083 btuB Dickeya zeae Ech1591 vitamin B12/cobalamin outer membrane transporter YP_003002504.1 152049 D 561229 CDS YP_003002505.1 251787784 8117084 153889..154761 1 NC_012912.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 154761 8117084 Dd1591_0133 Dickeya zeae Ech1591 glutamate racemase YP_003002505.1 153889 D 561229 CDS YP_003002506.1 251787785 8117092 complement(160792..161619) 1 NC_012912.1 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 161619 8117092 Dd1591_0134 Dickeya zeae Ech1591 transcriptional regulator HdfR YP_003002506.1 160792 R 561229 CDS YP_003002507.1 251787786 8117093 161740..162078 1 NC_012912.1 PFAM: protein of unknown function DUF413; KEGG: eca:ECA4231 hypothetical protein; hypothetical protein 162078 8117093 Dd1591_0135 Dickeya zeae Ech1591 hypothetical protein YP_003002507.1 161740 D 561229 CDS YP_003002508.1 251787787 8117094 complement(162141..163667) 1 NC_012912.1 KEGG: eca:ECA4230 magnesium-chelatase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 163667 8117094 Dd1591_0136 Dickeya zeae Ech1591 Mg chelatase subunit ChlI YP_003002508.1 162141 R 561229 CDS YP_003002509.1 251787788 8117095 164014..165225 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: spe:Spro_4761 major facilitator transporter; major facilitator superfamily protein 165225 8117095 Dd1591_0137 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003002509.1 164014 D 561229 CDS YP_003002510.1 251787789 8117096 165607..167253 1 NC_012912.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 167253 8117096 Dd1591_0138 Dickeya zeae Ech1591 acetolactate synthase 2 catalytic subunit YP_003002510.1 165607 D 561229 CDS YP_003002511.1 251787790 8117097 167307..167564 1 NC_012912.1 KEGG: eca:ECA4228 acetolactate synthase 2 regulatory subunit; acetolactate synthase 2 regulatory subunit 167564 ilvM 8117097 ilvM Dickeya zeae Ech1591 acetolactate synthase 2 regulatory subunit YP_003002511.1 167307 D 561229 CDS YP_003002512.1 251787791 8117098 167588..168514 1 NC_012912.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 168514 8117098 Dd1591_0140 Dickeya zeae Ech1591 branched-chain amino acid aminotransferase YP_003002512.1 167588 D 561229 CDS YP_003002513.1 251787792 8117099 168588..170438 1 NC_012912.1 KEGG: ect:ECIAI39_3015 dihydroxyacid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 170438 8117099 Dd1591_0141 Dickeya zeae Ech1591 dihydroxy-acid dehydratase YP_003002513.1 168588 D 561229 CDS YP_003002514.1 251787793 8117100 170444..171988 1 NC_012912.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 171988 8117100 Dd1591_0142 Dickeya zeae Ech1591 threonine dehydratase YP_003002514.1 170444 D 561229 CDS YP_003002515.1 251787794 8117101 172097..172837 1 NC_012912.1 KEGG: eca:ECA4224 hypothetical protein; hypothetical protein 172837 8117101 Dd1591_0143 Dickeya zeae Ech1591 hypothetical protein YP_003002515.1 172097 D 561229 CDS YP_003002516.1 251787795 8117102 complement(172841..173605) 1 NC_012912.1 KEGG: eca:ECA4223 hypothetical protein; hypothetical protein 173605 8117102 Dd1591_0144 Dickeya zeae Ech1591 hypothetical protein YP_003002516.1 172841 R 561229 CDS YP_003002517.1 251787796 8117103 complement(173605..174492) 1 NC_012912.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 174492 8117103 Dd1591_0145 Dickeya zeae Ech1591 DNA-binding transcriptional regulator IlvY YP_003002517.1 173605 R 561229 CDS YP_003002518.1 251787797 8117104 174662..176140 1 NC_012912.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 176140 8117104 Dd1591_0146 Dickeya zeae Ech1591 ketol-acid reductoisomerase YP_003002518.1 174662 D 561229 CDS YP_003002519.1 251787798 8117105 176232..176330 1 NC_012912.1 hypothetical protein 176330 8117105 Dd1591_0147 Dickeya zeae Ech1591 hypothetical protein YP_003002519.1 176232 D 561229 CDS YP_003002520.1 251787799 8117106 complement(176368..177867) 1 NC_012912.1 TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: eca:ECA4218 sodium/proline symporter; sodium/proline symporter 177867 8117106 Dd1591_0148 Dickeya zeae Ech1591 sodium/proline symporter YP_003002520.1 176368 R 561229 CDS YP_003002521.1 251787800 8117107 178228..182205 1 NC_012912.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; KEGG: spe:Spro_2931 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 182205 8117107 Dd1591_0149 Dickeya zeae Ech1591 delta-1-pyrroline-5-carboxylate dehydrogenase YP_003002521.1 178228 D 561229 CDS YP_003002522.1 251787801 8117108 complement(182640..182921) 1 NC_012912.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eca:ECA4216 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 182921 8117108 Dd1591_0150 Dickeya zeae Ech1591 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003002522.1 182640 R 561229 CDS YP_003002523.1 251787802 8117109 183106..185130 1 NC_012912.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 185130 8117109 Dd1591_0151 Dickeya zeae Ech1591 ATP-dependent DNA helicase Rep YP_003002523.1 183106 D 561229 CDS YP_003002524.1 251787803 8117110 complement(185183..186991) 1 NC_012912.1 PFAM: glycoside hydrolase family 28; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: yen:YE0164 exo-poly-alpha-D-galacturonosidase precursor; glycoside hydrolase family 28 186991 8117110 Dd1591_0152 Dickeya zeae Ech1591 glycoside hydrolase family 28 YP_003002524.1 185183 R 561229 CDS YP_003002525.1 251787804 8117111 complement(187322..189136) 1 NC_012912.1 PFAM: glycoside hydrolase family 28; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; Parallel beta-helix repeat; KEGG: yen:YE0164 exo-poly-alpha-D-galacturonosidase precursor; glycoside hydrolase family 28 189136 8117111 Dd1591_0153 Dickeya zeae Ech1591 glycoside hydrolase family 28 YP_003002525.1 187322 R 561229 CDS YP_003002526.1 251787805 8117112 complement(189461..190963) 1 NC_012912.1 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase 190963 8117112 Dd1591_0154 Dickeya zeae Ech1591 guanosine pentaphosphate phosphohydrolase YP_003002526.1 189461 R 561229 CDS YP_003002527.1 251787806 8117113 complement(190971..192257) 1 NC_012912.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 192257 8117113 Dd1591_0155 Dickeya zeae Ech1591 ATP-dependent RNA helicase RhlB YP_003002527.1 190971 R 561229 CDS YP_003002528.1 251787807 8117114 192377..192703 1 NC_012912.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: eta:ETA_01950 thioredoxin 1; thioredoxin 192703 8117114 Dd1591_0156 Dickeya zeae Ech1591 thioredoxin YP_003002528.1 192377 D 561229 CDS YP_003002529.1 251787808 8117115 193133..194392 1 NC_012912.1 KEGG: cko:CKO_00124 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Ribonuclease B OB region domain; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 194392 8117115 Dd1591_0157 Dickeya zeae Ech1591 transcription termination factor Rho YP_003002529.1 193133 D 561229 CDS YP_003002530.1 251787809 8117116 194631..195692 1 NC_012912.1 TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: eca:ECA4210 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 195692 8117116 Dd1591_0158 Dickeya zeae Ech1591 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_003002530.1 194631 D 561229 CDS YP_003002531.1 251787810 8117117 195714..196739 1 NC_012912.1 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 196739 8117117 Dd1591_0159 Dickeya zeae Ech1591 lipopolysaccharide biosynthesis protein WzzE YP_003002531.1 195714 D 561229 CDS YP_003002532.1 251787811 8117118 196820..197950 1 NC_012912.1 KEGG: spe:Spro_0163 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 197950 8117118 Dd1591_0160 Dickeya zeae Ech1591 UDP-N-acetylglucosamine 2-epimerase YP_003002532.1 196820 D 561229 CDS YP_003002533.1 251787812 8117119 197947..199209 1 NC_012912.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: yps:YPTB0171 UDP-N-acetyl-D-mannosamine dehydrogenase; nucleotide sugar dehydrogenase 199209 8117119 Dd1591_0161 Dickeya zeae Ech1591 nucleotide sugar dehydrogenase YP_003002533.1 197947 D 561229 CDS YP_003002534.1 251787813 8117120 199257..199973 1 NC_012912.1 TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA4205 TDP-fucosamine acetyltransferase; TDP-fucosamine acetyltransferase 199973 8117120 Dd1591_0162 Dickeya zeae Ech1591 TDP-fucosamine acetyltransferase YP_003002534.1 199257 D 561229 CDS YP_003002535.1 251787814 8117121 200008..201138 1 NC_012912.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 201138 8117121 Dd1591_0163 Dickeya zeae Ech1591 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_003002535.1 200008 D 561229 CDS YP_003002536.1 251787815 8117122 201138..202388 1 NC_012912.1 PFAM: polysaccharide biosynthesis protein; KEGG: eca:ECA4203 entero common antigen biosynthesis protein; polysaccharide biosynthesis protein 202388 8117122 Dd1591_0164 Dickeya zeae Ech1591 polysaccharide biosynthesis protein YP_003002536.1 201138 D 561229 CDS YP_003002537.1 251787816 8117123 202385..203470 1 NC_012912.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 203470 8117123 Dd1591_0165 Dickeya zeae Ech1591 4-alpha-L-fucosyltransferase YP_003002537.1 202385 D 561229 CDS YP_003002538.1 251787817 8117124 203463..204791 1 NC_012912.1 enterobacterial common antigen polymerase; putative common antigen polymerase 204791 8117124 Dd1591_0166 Dickeya zeae Ech1591 putative common antigen polymerase YP_003002538.1 203463 D 561229 CDS YP_003002539.1 251787818 8117125 204788..205522 1 NC_012912.1 KEGG: eca:ECA4200 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; putative UDP-N-acetyl-D-mannosaminuronic acid transferase 205522 8117125 Dd1591_0167 Dickeya zeae Ech1591 putative UDP-N-acetyl-D-mannosaminuronic acid transferase YP_003002539.1 204788 D 561229 CDS YP_003002540.1 251787819 8117126 205810..207204 1 NC_012912.1 uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; putative transport protein YifK 207204 8117126 Dd1591_0168 Dickeya zeae Ech1591 putative transport protein YifK YP_003002540.1 205810 D 561229 CDS YP_003002541.1 251787820 8117131 207977..208315 1 NC_012912.1 KEGG: aha:AHA_0731 steroid delta-isomerase domain-containing protein; steroid delta-isomerase domain-containing protein 208315 8117131 Dd1591_0169 Dickeya zeae Ech1591 steroid delta-isomerase domain-containing protein YP_003002541.1 207977 D 561229 CDS YP_003002542.1 251787821 8117132 208574..209938 1 NC_012912.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 209938 8117132 Dd1591_0170 Dickeya zeae Ech1591 adenylosuccinate lyase YP_003002542.1 208574 D 561229 CDS YP_003002543.1 251787822 8117133 209950..210474 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA4196 putative acetyltransferase; GCN5-related N-acetyltransferase 210474 8117133 Dd1591_0171 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003002543.1 209950 D 561229 CDS YP_003002544.1 251787823 8117134 210488..211267 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4195 putative amino-acid ABC transporter binding protein; extracellular solute-binding protein family 3 211267 8117134 Dd1591_0172 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003002544.1 210488 D 561229 CDS YP_003002545.1 251787824 8117135 211328..212011 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4194 amino-acid ABC transporter permease protein; polar amino acid ABC transporter permease 212011 8117135 Dd1591_0173 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003002545.1 211328 D 561229 CDS YP_003002546.1 251787825 8117136 212021..212782 1 NC_012912.1 PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: eca:ECA4193 putative amino-acid ABC transporter ATP-binding protein; ABC transporter 212782 8117136 Dd1591_0174 Dickeya zeae Ech1591 ABC transporter YP_003002546.1 212021 D 561229 CDS YP_003002547.1 251787826 8117137 212862..214022 1 NC_012912.1 KEGG: eca:ECA4192 putative peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 214022 8117137 Dd1591_0175 Dickeya zeae Ech1591 amidohydrolase YP_003002547.1 212862 D 561229 CDS YP_003002548.1 251787827 8117138 complement(214646..215842) 1 NC_012912.1 KEGG: eca:ECA4191 putative protoheme IX biogenesis protein; TIGRFAM: HemY protein; PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; putative protoheme IX biogenesis protein 215842 8117138 Dd1591_0176 Dickeya zeae Ech1591 putative protoheme IX biogenesis protein YP_003002548.1 214646 R 561229 CDS YP_003002549.1 251787828 8117139 complement(215845..216978) 1 NC_012912.1 PFAM: protein of unknown function DUF513 hemX; KEGG: eca:ECA4190 putative uroporphyrinogen III C-methyltransferase; putative uroporphyrinogen III C-methyltransferase 216978 8117139 Dd1591_0177 Dickeya zeae Ech1591 putative uroporphyrinogen III C-methyltransferase YP_003002549.1 215845 R 561229 CDS YP_003002550.1 251787829 8117140 complement(217067..217807) 1 NC_012912.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 217807 hemD 8117140 hemD Dickeya zeae Ech1591 uroporphyrinogen-III synthase YP_003002550.1 217067 R 561229 CDS YP_003002551.1 251787830 8117141 complement(217804..218772) 1 NC_012912.1 KEGG: ent:Ent638_3987 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 218772 8117141 Dd1591_0179 Dickeya zeae Ech1591 porphobilinogen deaminase YP_003002551.1 217804 R 561229 CDS YP_003002552.1 251787831 8117142 219070..221628 1 NC_012912.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 221628 cyaA 8117142 cyaA Dickeya zeae Ech1591 adenylate cyclase YP_003002552.1 219070 D 561229 CDS YP_003002553.1 251787832 8117143 complement(221686..222006) 1 NC_012912.1 TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: eca:ECA4185 frataxin-like protein; iron donor protein CyaY 222006 8117143 Dd1591_0181 Dickeya zeae Ech1591 iron donor protein CyaY YP_003002553.1 221686 R 561229 CDS YP_003002554.1 251787833 8117144 222066..222248 1 NC_012912.1 KEGG: eca:ECA4184 putative lipoprotein; putative lipoprotein 222248 8117144 Dd1591_0182 Dickeya zeae Ech1591 putative lipoprotein YP_003002554.1 222066 D 561229 CDS YP_003002555.1 251787834 8117145 222337..223161 1 NC_012912.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 223161 dapF 8117145 dapF Dickeya zeae Ech1591 diaminopimelate epimerase YP_003002555.1 222337 D 561229 CDS YP_003002556.1 251787835 8117146 223158..223859 1 NC_012912.1 PFAM: protein of unknown function DUF484; KEGG: eca:ECA4182 hypothetical protein; hypothetical protein 223859 8117146 Dd1591_0184 Dickeya zeae Ech1591 hypothetical protein YP_003002556.1 223158 D 561229 CDS YP_003002557.1 251787836 8117147 223856..224764 1 NC_012912.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 224764 xerC 8117147 xerC Dickeya zeae Ech1591 site-specific tyrosine recombinase XerC YP_003002557.1 223856 D 561229 CDS YP_003002558.1 251787837 8117148 224764..225480 1 NC_012912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ecg:E2348C_4112 predicted hydrolase; HAD-superfamily hydrolase 225480 8117148 Dd1591_0186 Dickeya zeae Ech1591 HAD-superfamily hydrolase YP_003002558.1 224764 D 561229 CDS YP_003002559.1 251787838 8117149 225567..227729 1 NC_012912.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 227729 uvrD 8117149 uvrD Dickeya zeae Ech1591 DNA-dependent helicase II YP_003002559.1 225567 D 561229 CDS YP_003002560.1 251787839 8117150 228113..229063 1 NC_012912.1 responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 229063 8117150 Dd1591_0188 Dickeya zeae Ech1591 magnesium/nickel/cobalt transporter CorA YP_003002560.1 228113 D 561229 CDS YP_003002561.1 251787840 8117151 229239..230297 1 NC_012912.1 TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: eca:ECA4176 hypothetical protein; membrane protein AbrB duplication 230297 8117151 Dd1591_0189 Dickeya zeae Ech1591 membrane protein AbrB duplication YP_003002561.1 229239 D 561229 CDS YP_003002562.1 251787841 8117152 complement(230256..231176) 1 NC_012912.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA4175 hypothetical protein; RarD protein, DMT superfamily transporter 231176 8117152 Dd1591_0190 Dickeya zeae Ech1591 RarD protein, DMT superfamily transporter YP_003002562.1 230256 R 561229 CDS YP_003002563.1 251787842 8117153 complement(231278..231748) 1 NC_012912.1 PFAM: thioesterase superfamily protein; KEGG: eca:ECA4174 hypothetical protein; hypothetical protein 231748 8117153 Dd1591_0191 Dickeya zeae Ech1591 hypothetical protein YP_003002563.1 231278 R 561229 CDS YP_003002564.1 251787843 8117154 231993..232862 1 NC_012912.1 catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 232862 8117154 Dd1591_0192 Dickeya zeae Ech1591 phospholipase A YP_003002564.1 231993 D 561229 CDS YP_003002565.1 251787844 8117155 233061..234860 1 NC_012912.1 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ 234860 8117155 Dd1591_0193 Dickeya zeae Ech1591 ATP-dependent DNA helicase RecQ YP_003002565.1 233061 D 561229 CDS YP_003002566.1 251787845 8117156 234922..235545 1 NC_012912.1 TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4171 threonine efflux system; threonine efflux system 235545 8117156 Dd1591_0194 Dickeya zeae Ech1591 threonine efflux system YP_003002566.1 234922 D 561229 CDS YP_003002567.1 251787846 8117157 complement(235635..236255) 1 NC_012912.1 TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4170 homoserine/homoserine lactone efflux protein; homoserine/homoserine lactone efflux protein 236255 rhtB 8117157 rhtB Dickeya zeae Ech1591 homoserine/homoserine lactone efflux protein YP_003002567.1 235635 R 561229 CDS YP_003002568.1 251787847 8117158 236367..237359 1 NC_012912.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 237359 8117158 Dd1591_0196 Dickeya zeae Ech1591 lysophospholipase L2 YP_003002568.1 236367 D 561229 CDS YP_003002569.1 251787848 8117159 237412..238209 1 NC_012912.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: eca:ECA4168 putative sugar phosphatase; Cof-like hydrolase 238209 8117159 Dd1591_0197 Dickeya zeae Ech1591 Cof-like hydrolase YP_003002569.1 237412 D 561229 CDS YP_003002570.1 251787849 8117160 complement(238200..239282) 1 NC_012912.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase 239282 glpQ 8117160 glpQ Dickeya zeae Ech1591 glycerophosphodiester phosphodiesterase YP_003002570.1 238200 R 561229 CDS YP_003002571.1 251787850 8117161 complement(239427..240776) 1 NC_012912.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter 240776 glpT 8117161 glpT Dickeya zeae Ech1591 sn-glycerol-3-phosphate transporter YP_003002571.1 239427 R 561229 CDS YP_003002572.1 251787851 8117162 241076..242719 1 NC_012912.1 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A 242719 glpA 8117162 glpA Dickeya zeae Ech1591 sn-glycerol-3-phosphate dehydrogenase subunit A YP_003002572.1 241076 D 561229 CDS YP_003002573.1 251787852 8117163 242709..243959 1 NC_012912.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 243959 8117163 Dd1591_0201 Dickeya zeae Ech1591 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_003002573.1 242709 D 561229 CDS YP_003002574.1 251787853 8117164 243956..245158 1 NC_012912.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 245158 glpC 8117164 glpC Dickeya zeae Ech1591 sn-glycerol-3-phosphate dehydrogenase subunit C YP_003002574.1 243956 D 561229 CDS YP_003002575.1 251787854 8117165 245863..246561 1 NC_012912.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: eca:ECA4162 hypothetical protein; Pirin domain-containing protein 246561 8117165 Dd1591_0203 Dickeya zeae Ech1591 Pirin domain-containing protein YP_003002575.1 245863 D 561229 CDS YP_003002576.1 251787855 8117166 246846..248171 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 248171 8117166 Dd1591_0204 Dickeya zeae Ech1591 transposase IS4 family protein YP_003002576.1 246846 D 561229 CDS YP_003002577.1 251787856 8117167 complement(248278..249768) 1 NC_012912.1 KEGG: eca:ECA3946 hypothetical protein; hypothetical protein 249768 8117167 Dd1591_0205 Dickeya zeae Ech1591 hypothetical protein YP_003002577.1 248278 R 561229 CDS YP_003002578.1 251787857 8117168 complement(250617..251480) 1 NC_012912.1 PFAM: protein of unknown function DUF323; KEGG: plu:plu0187 CpmF protein involved in carbapenem resistance; hypothetical protein 251480 8117168 Dd1591_0206 Dickeya zeae Ech1591 hypothetical protein YP_003002578.1 250617 R 561229 CDS YP_003002579.1 251787858 8117169 complement(251489..252064) 1 NC_012912.1 KEGG: pmr:PMI1554 hypothetical protein; hypothetical protein 252064 8117169 Dd1591_0207 Dickeya zeae Ech1591 hypothetical protein YP_003002579.1 251489 R 561229 CDS YP_003002580.1 251787859 8117170 complement(252021..252608) 1 NC_012912.1 KEGG: plu:plu0880 CpmJ protein; CpmJ protein 252608 8117170 Dd1591_0208 Dickeya zeae Ech1591 CpmJ protein YP_003002580.1 252021 R 561229 CDS YP_003002581.1 251787860 8117171 complement(252644..252916) 1 NC_012912.1 PFAM: ferredoxin; KEGG: plu:plu0186 CpmE protein involved in carbapenem biosynthesis; ferredoxin 252916 8117171 Dd1591_0209 Dickeya zeae Ech1591 ferredoxin YP_003002581.1 252644 R 561229 CDS YP_003002582.1 251787861 8117172 complement(252913..254043) 1 NC_012912.1 PFAM: Proline dehydrogenase; KEGG: plu:plu0185 CpmD protein involved in carbapenem biosynthesis; Proline dehydrogenase 254043 8117172 Dd1591_0210 Dickeya zeae Ech1591 Proline dehydrogenase YP_003002582.1 252913 R 561229 CDS YP_003002583.1 251787862 8117173 complement(254154..254966) 1 NC_012912.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: plu:plu0184 CpmC protein involved in carbapenem biosynthesis; Taurine catabolism dioxygenase TauD/TfdA 254966 8117173 Dd1591_0211 Dickeya zeae Ech1591 Taurine catabolism dioxygenase TauD/TfdA YP_003002583.1 254154 R 561229 CDS YP_003002584.1 251787863 8117174 complement(254986..255738) 1 NC_012912.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: plu:plu0183 CpmB protein involved in carbapenem biosynthesis; Enoyl-CoA hydratase/isomerase 255738 8117174 Dd1591_0212 Dickeya zeae Ech1591 Enoyl-CoA hydratase/isomerase YP_003002584.1 254986 R 561229 CDS YP_003002585.1 251787864 8117175 complement(255742..257253) 1 NC_012912.1 PFAM: asparagine synthase; KEGG: plu:plu0182 CpmA protein involved in carbapenem biosynthesis; asparagine synthase 257253 8117175 Dd1591_0213 Dickeya zeae Ech1591 asparagine synthase YP_003002585.1 255742 R 561229 CDS YP_003002586.1 251787865 8117176 join(257629..257979,257979..258473) 1 NC_012912.1 KEGG: plu:plu4519 IS427 family transposase; transposase and inactivated derivatives-like protein 258473 8117176 Dd1591_0214 Dickeya zeae Ech1591 transposase and inactivated derivatives-like protein YP_003002586.1 257629 D 561229 CDS YP_003002587.1 251787866 8117177 258624..259622 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: esa:ESA_04301 hypothetical protein; LacI family transcriptional regulator 259622 8117177 Dd1591_0215 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003002587.1 258624 D 561229 CDS YP_003002588.1 251787867 8117178 complement(259633..260151) 1 NC_012912.1 KEGG: eca:ECA1839 gluconokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; carbohydrate kinase, thermoresistant glucokinase family 260151 8117178 Dd1591_0216 Dickeya zeae Ech1591 carbohydrate kinase, thermoresistant glucokinase family YP_003002588.1 259633 R 561229 CDS YP_003002589.1 251787868 8117179 260399..261715 1 NC_012912.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: spe:Spro_4651 gluconate transporter; gluconate transporter 261715 8117179 Dd1591_0217 Dickeya zeae Ech1591 gluconate transporter YP_003002589.1 260399 D 561229 CDS YP_003002590.1 251787869 8117180 complement(261811..262404) 1 NC_012912.1 YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); putative dITP- and XTP- hydrolase 262404 8117180 Dd1591_0218 Dickeya zeae Ech1591 putative dITP- and XTP- hydrolase YP_003002590.1 261811 R 561229 CDS YP_003002591.1 251787870 8117181 262604..263704 1 NC_012912.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 263704 8117181 Dd1591_0219 Dickeya zeae Ech1591 aspartate-semialdehyde dehydrogenase YP_003002591.1 262604 D 561229 CDS YP_003002592.1 251787871 8117182 263936..264355 1 NC_012912.1 PFAM: NikR nickel binding; CopG domain protein DNA-binding domain protein; KEGG: azo:azo3128 nickel responsive regulator; transcriptional regulator NikR, CopG family 264355 8117182 Dd1591_0220 Dickeya zeae Ech1591 transcriptional regulator NikR, CopG family YP_003002592.1 263936 D 561229 CDS YP_003002593.1 251787872 8117183 264877..265089 1 NC_012912.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: yen:YE3823 major cold shock protein; cold-shock DNA-binding domain-containing protein 265089 8117183 Dd1591_0221 Dickeya zeae Ech1591 cold-shock DNA-binding domain-containing protein YP_003002593.1 264877 D 561229 CDS YP_003002594.1 251787873 8117184 complement(265269..266954) 1 NC_012912.1 PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; KEGG: eca:ECA4152 putative two-component system sensor kinase; signal transduction histidine kinase, LytS 266954 8117184 Dd1591_0222 Dickeya zeae Ech1591 signal transduction histidine kinase, LytS YP_003002594.1 265269 R 561229 CDS YP_003002595.1 251787874 8117185 267334..269517 1 NC_012912.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 269517 8117185 Dd1591_0223 Dickeya zeae Ech1591 glycogen branching enzyme YP_003002595.1 267334 D 561229 CDS YP_003002596.1 251787875 8117186 269517..271487 1 NC_012912.1 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching enzyme 271487 8117186 Dd1591_0224 Dickeya zeae Ech1591 glycogen debranching enzyme YP_003002596.1 269517 D 561229 CDS YP_003002597.1 251787876 8118547 271504..272790 1 NC_012912.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 272790 glgC 8118547 glgC Dickeya zeae Ech1591 glucose-1-phosphate adenylyltransferase YP_003002597.1 271504 D 561229 CDS YP_003002598.1 251787877 8118548 272870..274303 1 NC_012912.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 274303 glgA 8118548 glgA Dickeya zeae Ech1591 glycogen synthase YP_003002598.1 272870 D 561229 CDS YP_003002599.1 251787878 8118549 274327..276774 1 NC_012912.1 KEGG: eca:ECA4147 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 276774 8118549 Dd1591_0227 Dickeya zeae Ech1591 glycogen/starch/alpha-glucan phosphorylase YP_003002599.1 274327 D 561229 CDS YP_003002600.1 251787879 8118550 complement(277248..278747) 1 NC_012912.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 278747 glpD 8118550 glpD Dickeya zeae Ech1591 glycerol-3-phosphate dehydrogenase YP_003002600.1 277248 R 561229 CDS YP_003002601.1 251787880 8118551 279088..279408 1 NC_012912.1 KEGG: eca:ECA4139 thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Thiosulfate sulfurtransferase 279408 8118551 Dd1591_0229 Dickeya zeae Ech1591 Thiosulfate sulfurtransferase YP_003002601.1 279088 D 561229 CDS YP_003002602.1 251787881 8118552 279584..280426 1 NC_012912.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 280426 8118552 Dd1591_0230 Dickeya zeae Ech1591 intramembrane serine protease GlpG YP_003002602.1 279584 D 561229 CDS YP_003002603.1 251787882 8118553 280552..281310 1 NC_012912.1 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR 281310 8118553 Dd1591_0231 Dickeya zeae Ech1591 DNA-binding transcriptional repressor GlpR YP_003002603.1 280552 D 561229 CDS YP_003002604.1 251787883 8118554 281355..283772 1 NC_012912.1 KEGG: eca:ECA4136 maltodextrin phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 283772 8118554 Dd1591_0232 Dickeya zeae Ech1591 glycogen/starch/alpha-glucan phosphorylase YP_003002604.1 281355 D 561229 CDS YP_003002605.1 251787884 8118555 283785..285938 1 NC_012912.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 285938 malQ 8118555 malQ Dickeya zeae Ech1591 4-alpha-glucanotransferase YP_003002605.1 283785 D 561229 CDS YP_003002606.1 251787885 8118556 complement(286062..286637) 1 NC_012912.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein 286637 8118556 Dd1591_0234 Dickeya zeae Ech1591 putative DNA uptake protein YP_003002606.1 286062 R 561229 CDS YP_003002607.1 251787886 8118557 complement(286694..287413) 1 NC_012912.1 KEGG: spe:Spro_4633 gluconate periplasmic binding protein; gluconate periplasmic binding protein 287413 8118557 Dd1591_0235 Dickeya zeae Ech1591 gluconate periplasmic binding protein YP_003002607.1 286694 R 561229 CDS YP_003002608.1 251787887 8118558 287492..288277 1 NC_012912.1 KEGG: eca:ECA4132 putative biotin biosynthesis protein; TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; bioH protein 288277 8118558 Dd1591_0236 Dickeya zeae Ech1591 bioH protein YP_003002608.1 287492 D 561229 CDS YP_003002609.1 251787888 8118560 288612..289820 1 NC_012912.1 PFAM: transposase mutator type; KEGG: yps:YPTB3311 putative transposase; transposase mutator type 289820 8118560 Dd1591_0238 Dickeya zeae Ech1591 transposase mutator type YP_003002609.1 288612 D 561229 CDS YP_003002610.1 251787889 8118561 complement(289854..290069) 1 NC_012912.1 PFAM: protein of unknown function DUF1493; KEGG: yps:YPTB1663 putative acyl carrier protein; hypothetical protein 290069 8118561 Dd1591_0239 Dickeya zeae Ech1591 hypothetical protein YP_003002610.1 289854 R 561229 CDS YP_003002611.1 251787890 8118562 complement(290310..292652) 1 NC_012912.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: eca:ECA4122 putative RNA binding protein; RNA binding S1 domain-containing protein 292652 8118562 Dd1591_0240 Dickeya zeae Ech1591 RNA binding S1 domain-containing protein YP_003002611.1 290310 R 561229 CDS YP_003002612.1 251787891 8118563 complement(292821..294530) 1 NC_012912.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: eca:ECA4119 putative acyltransferase; phospholipid/glycerol acyltransferase 294530 8118563 Dd1591_0241 Dickeya zeae Ech1591 phospholipid/glycerol acyltransferase YP_003002612.1 292821 R 561229 CDS YP_003002613.1 251787892 8118564 complement(294685..296685) 1 NC_012912.1 PFAM: sulfatase; KEGG: asu:Asuc_0556 sulfatase; sulfatase 296685 8118564 Dd1591_0242 Dickeya zeae Ech1591 sulfatase YP_003002613.1 294685 R 561229 CDS YP_003002614.1 251787893 8118565 complement(296816..297298) 1 NC_012912.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: shm:Shewmr7_3890 transcription elongation factor GreB; transcription elongation factor GreB 297298 8118565 Dd1591_0243 Dickeya zeae Ech1591 transcription elongation factor GreB YP_003002614.1 296816 R 561229 CDS YP_003002615.1 251787894 8118566 297569..298288 1 NC_012912.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 298288 ompR 8118566 ompR Dickeya zeae Ech1591 osmolarity response regulator YP_003002615.1 297569 D 561229 CDS YP_003002616.1 251787895 8118567 298285..299697 1 NC_012912.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 299697 envZ 8118567 envZ Dickeya zeae Ech1591 osmolarity sensor protein YP_003002616.1 298285 D 561229 CDS YP_003002617.1 251787896 8118568 complement(299812..301431) 1 NC_012912.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 301431 8118568 Dd1591_0246 Dickeya zeae Ech1591 phosphoenolpyruvate carboxykinase YP_003002617.1 299812 R 561229 CDS YP_003002618.1 251787897 8118569 301501..301746 1 NC_012912.1 hypothetical protein 301746 8118569 Dd1591_0247 Dickeya zeae Ech1591 hypothetical protein YP_003002618.1 301501 D 561229 CDS YP_003002619.1 251787898 8118570 complement(301703..302575) 1 NC_012912.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 302575 hslO 8118570 hslO Dickeya zeae Ech1591 Hsp33-like chaperonin YP_003002619.1 301703 R 561229 CDS YP_003002620.1 251787899 8118571 complement(302601..303014) 1 NC_012912.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: ses:SARI_04118 ribosome-associated heat shock protein HSP15; RNA-binding S4 domain-containing protein 303014 8118571 Dd1591_0249 Dickeya zeae Ech1591 RNA-binding S4 domain-containing protein YP_003002620.1 302601 R 561229 CDS YP_003002621.1 251787900 8118572 complement(303011..303715) 1 NC_012912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA4103 putative hydrolase; HAD-superfamily hydrolase 303715 8118572 Dd1591_0250 Dickeya zeae Ech1591 HAD-superfamily hydrolase YP_003002621.1 303011 R 561229 CDS YP_003002622.1 251787901 8118573 complement(303835..305970) 1 NC_012912.1 PFAM: Intracellular growth attenuator IgaA; KEGG: eca:ECA4102 intracellular growth attenuator protein; Intracellular growth attenuator IgaA 305970 8118573 Dd1591_0251 Dickeya zeae Ech1591 Intracellular growth attenuator IgaA YP_003002622.1 303835 R 561229 CDS YP_003002623.1 251787902 8118574 306393..306965 1 NC_012912.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 306965 nudE 8118574 nudE Dickeya zeae Ech1591 ADP-ribose diphosphatase NudE YP_003002623.1 306393 D 561229 CDS YP_003002624.1 251787903 8118575 complement(307119..309677) 1 NC_012912.1 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 309677 mrcA 8118575 mrcA Dickeya zeae Ech1591 peptidoglycan synthetase YP_003002624.1 307119 R 561229 CDS YP_003002625.1 251787904 8118576 complement(309772..309924) 1 NC_012912.1 hypothetical protein 309924 8118576 Dd1591_0254 Dickeya zeae Ech1591 hypothetical protein YP_003002625.1 309772 R 561229 CDS YP_003002626.1 251787905 8118577 309927..310805 1 NC_012912.1 KEGG: eca:ECA4098 hypothetical protein; hypothetical protein 310805 8118577 Dd1591_0255 Dickeya zeae Ech1591 hypothetical protein YP_003002626.1 309927 D 561229 CDS YP_003002627.1 251787906 8118578 310799..311359 1 NC_012912.1 PFAM: Fimbrial assembly family protein; KEGG: eca:ECA4097 hypothetical protein; Fimbrial assembly family protein 311359 8118578 Dd1591_0256 Dickeya zeae Ech1591 Fimbrial assembly family protein YP_003002627.1 310799 D 561229 CDS YP_003002628.1 251787907 8118579 311359..311910 1 NC_012912.1 KEGG: eca:ECA4096 hypothetical protein; hypothetical protein 311910 8118579 Dd1591_0257 Dickeya zeae Ech1591 hypothetical protein YP_003002628.1 311359 D 561229 CDS YP_003002629.1 251787908 8118580 311907..312266 1 NC_012912.1 KEGG: eca:ECA4095 hypothetical protein; hypothetical protein 312266 8118580 Dd1591_0258 Dickeya zeae Ech1591 hypothetical protein YP_003002629.1 311907 D 561229 CDS YP_003002630.1 251787909 8118581 312270..313571 1 NC_012912.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; putative outer membrane porin HofQ 313571 hofQ 8118581 hofQ Dickeya zeae Ech1591 putative outer membrane porin HofQ YP_003002630.1 312270 D 561229 CDS YP_003002631.1 251787910 8118582 314007..314576 1 NC_012912.1 PFAM: shikimate kinase; KEGG: esa:ESA_04351 shikimate kinase I; Shikimate kinase 314576 8118582 Dd1591_0260 Dickeya zeae Ech1591 Shikimate kinase YP_003002631.1 314007 D 561229 CDS YP_003002632.1 251787911 8118583 314630..315715 1 NC_012912.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 315715 aroB 8118583 aroB Dickeya zeae Ech1591 3-dehydroquinate synthase YP_003002632.1 314630 D 561229 CDS YP_003002633.1 251787912 8118584 315850..316902 1 NC_012912.1 PFAM: Sporulation domain protein; KEGG: eca:ECA4091 hypothetical protein; hypothetical protein 316902 8118584 Dd1591_0262 Dickeya zeae Ech1591 hypothetical protein YP_003002633.1 315850 D 561229 CDS YP_003002634.1 251787913 8118585 316979..317806 1 NC_012912.1 KEGG: eca:ECA4090 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 317806 8118585 Dd1591_0263 Dickeya zeae Ech1591 DNA adenine methylase YP_003002634.1 316979 D 561229 CDS YP_003002635.1 251787914 8118586 318031..318708 1 NC_012912.1 KEGG: eca:ECA4089 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 318708 8118586 Dd1591_0264 Dickeya zeae Ech1591 ribulose-phosphate 3-epimerase YP_003002635.1 318031 D 561229 CDS YP_003002636.1 251787915 8118587 318701..319399 1 NC_012912.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 319399 8118587 Dd1591_0265 Dickeya zeae Ech1591 phosphoglycolate phosphatase YP_003002636.1 318701 D 561229 CDS YP_003002637.1 251787916 8118588 319401..320405 1 NC_012912.1 KEGG: eca:ECA4087 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 320405 8118588 Dd1591_0266 Dickeya zeae Ech1591 tryptophanyl-tRNA synthetase YP_003002637.1 319401 D 561229 CDS YP_003002638.1 251787917 8118589 320703..321857 1 NC_012912.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA4077 putative mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 321857 8118589 Dd1591_0267 Dickeya zeae Ech1591 mandelate racemase/muconate lactonizing protein YP_003002638.1 320703 D 561229 CDS YP_003002639.1 251787918 8118590 322101..322676 1 NC_012912.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: eca:ECA4071 peptidyl-prolyl cis-trans isomerase A (rotamase A); peptidyl-prolyl cis-trans isomerase A (rotamase A) 322676 8118590 Dd1591_0268 Dickeya zeae Ech1591 peptidyl-prolyl cis-trans isomerase A (rotamase A) YP_003002639.1 322101 D 561229 CDS YP_003002640.1 251787919 8118591 complement(322884..324149) 1 NC_012912.1 KEGG: eca:ECA4070 pectate lyase; pectate lyase 324149 8118591 Dd1591_0269 Dickeya zeae Ech1591 pectate lyase YP_003002640.1 322884 R 561229 CDS YP_003002641.1 251787920 8118592 complement(324317..325444) 1 NC_012912.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA4069 pectate lyase III; pectate lyase/Amb allergen 325444 8118592 Dd1591_0270 Dickeya zeae Ech1591 pectate lyase/Amb allergen YP_003002641.1 324317 R 561229 CDS YP_003002642.1 251787921 8118593 complement(325913..327040) 1 NC_012912.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA4069 pectate lyase III; pectate lyase/Amb allergen 327040 8118593 Dd1591_0271 Dickeya zeae Ech1591 pectate lyase/Amb allergen YP_003002642.1 325913 R 561229 CDS YP_003002643.1 251787922 8118594 327498..328868 1 NC_012912.1 KEGG: vvu:VV2_1425 glutamate decarboxylase; glutamate decarboxylase 328868 8118594 Dd1591_0272 Dickeya zeae Ech1591 glutamate decarboxylase YP_003002643.1 327498 D 561229 CDS YP_003002644.1 251787923 8118595 328870..329901 1 NC_012912.1 KEGG: fph:Fphi_0374 hypothetical protein; hypothetical protein 329901 8118595 Dd1591_0273 Dickeya zeae Ech1591 hypothetical protein YP_003002644.1 328870 D 561229 CDS YP_003002645.1 251787924 8118596 329898..331184 1 NC_012912.1 KEGG: dal:Dalk_2018 PAS/PAC sensor hybrid histidine kinase; signal transduction histidine kinase regulating citrate/malate metabolism 331184 8118596 Dd1591_0274 Dickeya zeae Ech1591 signal transduction histidine kinase regulating citrate/malate metabolism YP_003002645.1 329898 D 561229 CDS YP_003002646.1 251787925 8118597 331181..332323 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_1856 putative cyanate permease; major facilitator superfamily protein 332323 8118597 Dd1591_0275 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003002646.1 331181 D 561229 CDS YP_003002647.1 251787926 8118598 332536..333162 1 NC_012912.1 PFAM: glycoside hydrolase family 19; KEGG: pfl:PFL_3798 chitinase domain-containing protein; glycoside hydrolase family 19 333162 8118598 Dd1591_0276 Dickeya zeae Ech1591 glycoside hydrolase family 19 YP_003002647.1 332536 D 561229 CDS YP_003002648.1 251787927 8118599 333771..335735 1 NC_012912.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: yen:YE2922 putative protease; peptidase S8/S53 subtilisin kexin sedolisin 335735 8118599 Dd1591_0277 Dickeya zeae Ech1591 peptidase S8/S53 subtilisin kexin sedolisin YP_003002648.1 333771 D 561229 CDS YP_003002649.1 251787928 8118600 335842..335991 1 NC_012912.1 hypothetical protein 335991 8118600 Dd1591_0278 Dickeya zeae Ech1591 hypothetical protein YP_003002649.1 335842 D 561229 CDS YP_003002650.1 251787929 8118601 337294..338499 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: smt:Smal_2105 putative sigma54 specific transcriptional regulator; AraC family transcriptional regulator 338499 8118601 Dd1591_0279 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003002650.1 337294 D 561229 CDS YP_003002651.1 251787930 8118603 338942..339262 1 NC_012912.1 PFAM: protein of unknown function DUF891; KEGG: esa:ESA_03838 hypothetical protein; hypothetical protein 339262 8118603 Dd1591_0281 Dickeya zeae Ech1591 hypothetical protein YP_003002651.1 338942 D 561229 CDS YP_003002652.1 251787931 8118604 339252..339536 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu0900 hypothetical protein; XRE family transcriptional regulator 339536 8118604 Dd1591_0282 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003002652.1 339252 D 561229 CDS YP_003002653.1 251787932 8118606 339859..340434 1 NC_012912.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: yen:YE3958 para-aminobenzoate synthase component II; glutamine amidotransferase of anthranilate synthase 340434 8118606 Dd1591_0284 Dickeya zeae Ech1591 glutamine amidotransferase of anthranilate synthase YP_003002653.1 339859 D 561229 CDS YP_003002654.1 251787933 8118607 340537..341778 1 NC_012912.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 341778 argD 8118607 argD Dickeya zeae Ech1591 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_003002654.1 340537 D 561229 CDS YP_003002655.1 251787934 8118608 complement(341890..342663) 1 NC_012912.1 negative regulator of ulaG and ulaABCDEF; transcriptional repressor UlaR 342663 8118608 Dd1591_0286 Dickeya zeae Ech1591 transcriptional repressor UlaR YP_003002655.1 341890 R 561229 CDS YP_003002656.1 251787935 8118609 complement(342761..343633) 1 NC_012912.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; putative L-xylulose 5-phosphate 3-epimerase 343633 8118609 Dd1591_0287 Dickeya zeae Ech1591 putative L-xylulose 5-phosphate 3-epimerase YP_003002656.1 342761 R 561229 CDS YP_003002657.1 251787936 8118610 complement(343716..344783) 1 NC_012912.1 KEGG: ppr:PBPRB0271 putative L-ascorbate 6-phosphate lactonase; putative L-ascorbate 6-phosphate lactonase 344783 8118610 Dd1591_0288 Dickeya zeae Ech1591 putative L-ascorbate 6-phosphate lactonase YP_003002657.1 343716 R 561229 CDS YP_003002658.1 251787937 8118611 345326..347071 1 NC_012912.1 PFAM: putative sugar-specific permease SgaT/UlaA; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ppr:PBPRB0273 ascorbate-specific PTS system enzyme IIC/IIB; PTS system ascorbate-specific transporter subunits IICB 347071 8118611 Dd1591_0289 Dickeya zeae Ech1591 PTS system ascorbate-specific transporter subunits IICB YP_003002658.1 345326 D 561229 CDS YP_003002659.1 251787938 8118612 347120..347596 1 NC_012912.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vvy:VVA1605 PTS system, IIA component; putative PTS IIA-like nitrogen-regulatory protein PtsN 347596 8118612 Dd1591_0290 Dickeya zeae Ech1591 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_003002659.1 347120 D 561229 CDS YP_003002660.1 251787939 8118613 347639..348331 1 NC_012912.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 348331 araD 8118613 araD Dickeya zeae Ech1591 L-ribulose-5-phosphate 4-epimerase YP_003002660.1 347639 D 561229 CDS YP_003002661.1 251787940 8118614 348479..349123 1 NC_012912.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase 349123 ulaD 8118614 ulaD Dickeya zeae Ech1591 3-keto-L-gulonate-6-phosphate decarboxylase YP_003002661.1 348479 D 561229 CDS YP_003002662.1 251787941 8118615 complement(349223..349855) 1 NC_012912.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 349855 8118615 Dd1591_0293 Dickeya zeae Ech1591 cAMP-regulatory protein YP_003002662.1 349223 R 561229 CDS YP_003002663.1 251787942 8118616 350233..350640 1 NC_012912.1 PFAM: OsmC family protein; KEGG: efe:EFER_3329 hypothetical protein; hypothetical protein 350640 8118616 Dd1591_0294 Dickeya zeae Ech1591 hypothetical protein YP_003002663.1 350233 D 561229 CDS YP_003002664.1 251787943 8118617 complement(350695..351564) 1 NC_012912.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: eca:ECA4062 phosphoribulokinase; Phosphoribulokinase 351564 8118617 Dd1591_0295 Dickeya zeae Ech1591 Phosphoribulokinase YP_003002664.1 350695 R 561229 CDS YP_003002665.1 251787944 8118618 complement(351722..351952) 1 NC_012912.1 PFAM: protein of unknown function UPF0270; KEGG: efe:EFER_3326 hypothetical protein; hypothetical protein 351952 8118618 Dd1591_0296 Dickeya zeae Ech1591 hypothetical protein YP_003002665.1 351722 R 561229 CDS YP_003002666.1 251787945 8118619 complement(351949..352944) 1 NC_012912.1 PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA4060 putative hydrolase; putative hydrolase 352944 8118619 Dd1591_0297 Dickeya zeae Ech1591 putative hydrolase YP_003002666.1 351949 R 561229 CDS YP_003002667.1 251787946 8118620 353063..353668 1 NC_012912.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4059 hypothetical protein; lysine exporter protein LysE/YggA 353668 8118620 Dd1591_0298 Dickeya zeae Ech1591 lysine exporter protein LysE/YggA YP_003002667.1 353063 D 561229 CDS YP_003002668.1 251787947 8118621 complement(353740..355659) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4058 putative ABC transporter ATP-binding protein; putative ABC transporter ATP-binding protein 355659 8118621 Dd1591_0299 Dickeya zeae Ech1591 putative ABC transporter ATP-binding protein YP_003002668.1 353740 R 561229 CDS YP_003002669.1 251787948 8118622 355783..356334 1 NC_012912.1 required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG 356334 8118622 Dd1591_0300 Dickeya zeae Ech1591 glutathione-regulated potassium-efflux system ancillary protein KefG YP_003002669.1 355783 D 561229 CDS YP_003002670.1 251787949 8118623 356337..358151 1 NC_012912.1 involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB 358151 8118623 Dd1591_0301 Dickeya zeae Ech1591 glutathione-regulated potassium-efflux system protein KefB YP_003002670.1 356337 D 561229 CDS YP_003002671.1 251787950 8118624 358210..358404 1 NC_012912.1 KEGG: eca:ECA4055 hypothetical protein; hypothetical protein 358404 8118624 Dd1591_0302 Dickeya zeae Ech1591 hypothetical protein YP_003002671.1 358210 D 561229 CDS YP_003002672.1 251787951 8118625 358554..359132 1 NC_012912.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ent:Ent638_3766 FKBP-type peptidyl-prolyl cis-trans isomerase; peptidylprolyl isomerase FKBP-type 359132 8118625 Dd1591_0303 Dickeya zeae Ech1591 peptidylprolyl isomerase FKBP-type YP_003002672.1 358554 D 561229 CDS YP_003002673.1 251787952 8118626 complement(359224..360591) 1 NC_012912.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: eta:ETA_25540 putative ethanolamin permease; ethanolamine transporter 360591 8118626 Dd1591_0304 Dickeya zeae Ech1591 ethanolamine transporter YP_003002673.1 359224 R 561229 CDS YP_003002674.1 251787953 8116867 361020..362036 1 NC_012912.1 PFAM: aminoglycoside phosphotransferase; KEGG: eta:ETA_25530 hypothetical protein; aminoglycoside phosphotransferase 362036 8116867 Dd1591_0305 Dickeya zeae Ech1591 aminoglycoside phosphotransferase YP_003002674.1 361020 D 561229 CDS YP_003002675.1 251787954 8116868 362187..363230 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eta:ETA_25520 AraC family transcriptional regulator; AraC family transcriptional regulator 363230 8116868 Dd1591_0306 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003002675.1 362187 D 561229 CDS YP_003002676.1 251787955 8116869 complement(363240..363458) 1 NC_012912.1 PFAM: SlyX family protein; KEGG: eta:ETA_31750 host factor for lysis of phiX174 infection SlyX; SlyX family protein 363458 8116869 Dd1591_0307 Dickeya zeae Ech1591 SlyX family protein YP_003002676.1 363240 R 561229 CDS YP_003002677.1 251787956 8116870 363671..364522 1 NC_012912.1 rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase 364522 8116870 Dd1591_0308 Dickeya zeae Ech1591 FKBP-type peptidyl-prolyl cis-trans isomerase YP_003002677.1 363671 D 561229 CDS YP_003002678.1 251787957 8116871 complement(364648..365805) 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA4045 sensor protein BasS/PmrB; sensor protein BasS/PmrB 365805 8116871 Dd1591_0309 Dickeya zeae Ech1591 sensor protein BasS/PmrB YP_003002678.1 364648 R 561229 CDS YP_003002679.1 251787958 8116872 complement(365802..366500) 1 NC_012912.1 response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR 366500 8116872 Dd1591_0310 Dickeya zeae Ech1591 DNA-binding transcriptional regulator BasR YP_003002679.1 365802 R 561229 CDS YP_003002680.1 251787959 8116873 complement(366497..368140) 1 NC_012912.1 with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; putative cell division protein 368140 8116873 Dd1591_0311 Dickeya zeae Ech1591 putative cell division protein YP_003002680.1 366497 R 561229 CDS YP_003002681.1 251787960 8116874 368324..369046 1 NC_012912.1 PFAM: YheO domain protein; KEGG: eca:ECA4042 putative DNA-binding protein; YheO domain-containing protein 369046 8116874 Dd1591_0312 Dickeya zeae Ech1591 YheO domain-containing protein YP_003002681.1 368324 D 561229 CDS YP_003002682.1 251787961 8116875 369046..369435 1 NC_012912.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 369435 8116875 Dd1591_0313 Dickeya zeae Ech1591 sulfur transfer complex subunit TusD YP_003002682.1 369046 D 561229 CDS YP_003002683.1 251787962 8116876 369452..369811 1 NC_012912.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC 369811 8116876 Dd1591_0314 Dickeya zeae Ech1591 sulfur relay protein TusC YP_003002683.1 369452 D 561229 CDS YP_003002684.1 251787963 8116877 369823..370110 1 NC_012912.1 TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: eca:ECA4039 putative intracellular sulfur oxidation protein; sulfur relay protein TusB/DsrH 370110 8116877 Dd1591_0315 Dickeya zeae Ech1591 sulfur relay protein TusB/DsrH YP_003002684.1 369823 D 561229 CDS YP_003002685.1 251787964 8116878 370243..370617 1 NC_012912.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 370617 rpsL 8116878 rpsL Dickeya zeae Ech1591 30S ribosomal protein S12 YP_003002685.1 370243 D 561229 CDS YP_003002686.1 251787965 8116879 370714..371184 1 NC_012912.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 371184 8116879 Dd1591_0317 Dickeya zeae Ech1591 30S ribosomal protein S7 YP_003002686.1 370714 D 561229 CDS YP_003002687.1 251787966 8116880 371276..373390 1 NC_012912.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 373390 8116880 Dd1591_0318 Dickeya zeae Ech1591 elongation factor G YP_003002687.1 371276 D 561229 CDS YP_003002688.1 251787967 8116881 373480..374664 1 NC_012912.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 374664 8116881 Dd1591_0319 Dickeya zeae Ech1591 elongation factor Tu YP_003002688.1 373480 D 561229 CDS YP_003002689.1 251787968 8116882 374794..374988 1 NC_012912.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA4034 bacterioferritin-associated ferredoxin; BFD domain-containing protein (2Fe-2S)-binding domain-containing protein 374988 8116882 Dd1591_0320 Dickeya zeae Ech1591 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein YP_003002689.1 374794 D 561229 CDS YP_003002690.1 251787969 8116883 375064..375537 1 NC_012912.1 iron storage protein; bacterioferritin 375537 8116883 Dd1591_0321 Dickeya zeae Ech1591 bacterioferritin YP_003002690.1 375064 D 561229 CDS YP_003002691.1 251787970 8116884 375831..376142 1 NC_012912.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 376142 rpsJ 8116884 rpsJ Dickeya zeae Ech1591 30S ribosomal protein S10 YP_003002691.1 375831 D 561229 CDS YP_003002692.1 251787971 8116885 376175..376804 1 NC_012912.1 PFAM: ribosomal protein L3; KEGG: eca:ECA4031 50S ribosomal protein L3; 50S ribosomal protein L3 376804 8116885 Dd1591_0323 Dickeya zeae Ech1591 50S ribosomal protein L3 YP_003002692.1 376175 D 561229 CDS YP_003002693.1 251787972 8116886 376815..377420 1 NC_012912.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 377420 rplD 8116886 rplD Dickeya zeae Ech1591 50S ribosomal protein L4 YP_003002693.1 376815 D 561229 CDS YP_003002694.1 251787973 8116887 377417..377719 1 NC_012912.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 377719 rplW 8116887 rplW Dickeya zeae Ech1591 50S ribosomal protein L23 YP_003002694.1 377417 D 561229 CDS YP_003002695.1 251787974 8116888 377737..378558 1 NC_012912.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 378558 rplB 8116888 rplB Dickeya zeae Ech1591 50S ribosomal protein L2 YP_003002695.1 377737 D 561229 CDS YP_003002696.1 251787975 8116889 378575..378853 1 NC_012912.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 378853 rpsS 8116889 rpsS Dickeya zeae Ech1591 30S ribosomal protein S19 YP_003002696.1 378575 D 561229 CDS YP_003002697.1 251787976 8116890 378868..379200 1 NC_012912.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 379200 rplV 8116890 rplV Dickeya zeae Ech1591 50S ribosomal protein L22 YP_003002697.1 378868 D 561229 CDS YP_003002698.1 251787977 8116891 379218..379919 1 NC_012912.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 379919 rpsC 8116891 rpsC Dickeya zeae Ech1591 30S ribosomal protein S3 YP_003002698.1 379218 D 561229 CDS YP_003002699.1 251787978 8116892 379933..380343 1 NC_012912.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: eca:ECA4024 50S ribosomal protein L16; 50S ribosomal protein L16 380343 8116892 Dd1591_0330 Dickeya zeae Ech1591 50S ribosomal protein L16 YP_003002699.1 379933 D 561229 CDS YP_003002700.1 251787979 8116893 380343..380534 1 NC_012912.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: ypb:YPTS_3882 ribosomal protein L29; 50S ribosomal protein L29 380534 8116893 Dd1591_0331 Dickeya zeae Ech1591 50S ribosomal protein L29 YP_003002700.1 380343 D 561229 CDS YP_003002701.1 251787980 8116894 380534..380788 1 NC_012912.1 PFAM: ribosomal protein S17; KEGG: eum:ECUMN_3784 30S ribosomal subunit protein S17; 30S ribosomal protein S17 380788 8116894 Dd1591_0332 Dickeya zeae Ech1591 30S ribosomal protein S17 YP_003002701.1 380534 D 561229 CDS YP_003002702.1 251787981 8116895 380954..381325 1 NC_012912.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 381325 rplN 8116895 rplN Dickeya zeae Ech1591 50S ribosomal protein L14 YP_003002702.1 380954 D 561229 CDS YP_003002703.1 251787982 8116896 381336..381650 1 NC_012912.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 381650 rplX 8116896 rplX Dickeya zeae Ech1591 50S ribosomal protein L24 YP_003002703.1 381336 D 561229 CDS YP_003002704.1 251787983 8116897 381665..382204 1 NC_012912.1 PFAM: ribosomal protein L5; KEGG: set:SEN3256 50S ribosomal subunit protein L5; 50S ribosomal protein L5 382204 8116897 Dd1591_0335 Dickeya zeae Ech1591 50S ribosomal protein L5 YP_003002704.1 381665 D 561229 CDS YP_003002705.1 251787984 8116898 382218..382523 1 NC_012912.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 382523 rpsN 8116898 rpsN Dickeya zeae Ech1591 30S ribosomal protein S14 YP_003002705.1 382218 D 561229 CDS YP_003002706.1 251787985 8116899 382557..382949 1 NC_012912.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 382949 rpsH 8116899 rpsH Dickeya zeae Ech1591 30S ribosomal protein S8 YP_003002706.1 382557 D 561229 CDS YP_003002707.1 251787986 8116900 382963..383496 1 NC_012912.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 383496 rplF 8116900 rplF Dickeya zeae Ech1591 50S ribosomal protein L6 YP_003002707.1 382963 D 561229 CDS YP_003002708.1 251787987 8116901 383506..383859 1 NC_012912.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 383859 rplR 8116901 rplR Dickeya zeae Ech1591 50S ribosomal protein L18 YP_003002708.1 383506 D 561229 CDS YP_003002709.1 251787988 8116902 383874..384374 1 NC_012912.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 384374 rpsE 8116902 rpsE Dickeya zeae Ech1591 30S ribosomal protein S5 YP_003002709.1 383874 D 561229 CDS YP_003002710.1 251787989 8116903 384381..384560 1 NC_012912.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 384560 rpmD 8116903 rpmD Dickeya zeae Ech1591 50S ribosomal protein L30 YP_003002710.1 384381 D 561229 CDS YP_003002711.1 251787990 8116904 384564..384998 1 NC_012912.1 late assembly protein; 50S ribosomal protein L15 384998 rplO 8116904 rplO Dickeya zeae Ech1591 50S ribosomal protein L15 YP_003002711.1 384564 D 561229 CDS YP_003002712.1 251787991 8116905 385006..386337 1 NC_012912.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 386337 secY 8116905 secY Dickeya zeae Ech1591 preprotein translocase subunit SecY YP_003002712.1 385006 D 561229 CDS YP_003002713.1 251787992 8116906 386371..386487 1 NC_012912.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 386487 rpmJ 8116906 rpmJ Dickeya zeae Ech1591 50S ribosomal protein L36 YP_003002713.1 386371 D 561229 CDS YP_003002714.1 251787993 8116907 386634..386990 1 NC_012912.1 PFAM: ribosomal protein S13; KEGG: pmr:PMI3277 30S ribosomal protein S13; 30S ribosomal protein S13 386990 8116907 Dd1591_0345 Dickeya zeae Ech1591 30S ribosomal protein S13 YP_003002714.1 386634 D 561229 CDS YP_004778103.1 342837485 11033610 387007..387396 1 NC_012912.1 ribosomal protein S11 387396 11033610 Dd1591_0345a Dickeya zeae Ech1591 ribosomal protein S11 YP_004778103.1 387007 D 561229 CDS YP_003002716.1 251787995 8116909 387427..388047 1 NC_012912.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 388047 rpsD 8116909 rpsD Dickeya zeae Ech1591 30S ribosomal protein S4 YP_003002716.1 387427 D 561229 CDS YP_003002717.1 251787996 8116910 388073..389062 1 NC_012912.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 389062 8116910 Dd1591_0348 Dickeya zeae Ech1591 DNA-directed RNA polymerase subunit alpha YP_003002717.1 388073 D 561229 CDS YP_003002718.1 251787997 8116911 389103..389495 1 NC_012912.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 389495 rplQ 8116911 rplQ Dickeya zeae Ech1591 50S ribosomal protein L17 YP_003002718.1 389103 D 561229 CDS YP_003002719.1 251787998 8116912 389624..390013 1 NC_012912.1 KEGG: kpn:KPN_03693 hypothetical protein; hypothetical protein 390013 8116912 Dd1591_0350 Dickeya zeae Ech1591 hypothetical protein YP_003002719.1 389624 D 561229 CDS YP_003002720.1 251787999 8116913 390071..390295 1 NC_012912.1 PFAM: protein of unknown function DUF331; KEGG: eum:ECUMN_3765 hypothetical protein; hypothetical protein 390295 8116913 Dd1591_0351 Dickeya zeae Ech1591 hypothetical protein YP_003002720.1 390071 D 561229 CDS YP_003002721.1 251788000 8116914 complement(390302..390727) 1 NC_012912.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: spe:Spro_4515 large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 390727 8116914 Dd1591_0352 Dickeya zeae Ech1591 large conductance mechanosensitive channel protein YP_003002721.1 390302 R 561229 CDS YP_003002722.1 251788001 8116915 complement(390834..392210) 1 NC_012912.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 392210 trkA 8116915 trkA Dickeya zeae Ech1591 potassium transporter peripheral membrane component YP_003002722.1 390834 R 561229 CDS YP_003002723.1 251788002 8116916 complement(392253..393548) 1 NC_012912.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B 393548 8116916 Dd1591_0354 Dickeya zeae Ech1591 16S rRNA methyltransferase B YP_003002723.1 392253 R 561229 CDS YP_003002724.1 251788003 8116917 complement(393609..394550) 1 NC_012912.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: eca:ECA4000 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 394550 8116917 Dd1591_0355 Dickeya zeae Ech1591 methionyl-tRNA formyltransferase YP_003002724.1 393609 R 561229 CDS YP_003002725.1 251788004 8116918 complement(394589..395098) 1 NC_012912.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 395098 def 8116918 def Dickeya zeae Ech1591 peptide deformylase YP_003002725.1 394589 R 561229 CDS YP_003002726.1 251788005 8116919 395212..396345 1 NC_012912.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: eca:ECA3998 hypothetical protein; DNA protecting protein DprA 396345 8116919 Dd1591_0357 Dickeya zeae Ech1591 DNA protecting protein DprA YP_003002726.1 395212 D 561229 CDS YP_003002727.1 251788006 8116920 396317..396790 1 NC_012912.1 PFAM: protein of unknown function DUF494; KEGG: eca:ECA3997 hypothetical protein; hypothetical protein 396790 8116920 Dd1591_0358 Dickeya zeae Ech1591 hypothetical protein YP_003002727.1 396317 D 561229 CDS YP_003002728.1 251788007 8116921 396810..397367 1 NC_012912.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: eca:ECA3996 putative DNA topoisomerase; DNA topoisomerase type IA zn finger domain-containing protein 397367 8116921 Dd1591_0359 Dickeya zeae Ech1591 DNA topoisomerase type IA zn finger domain-containing protein YP_003002728.1 396810 D 561229 CDS YP_003002729.1 251788008 8116922 397357..397929 1 NC_012912.1 PFAM: SUA5/yciO/yrdC domain; KEGG: eca:ECA3996 putative DNA topoisomerase; SUA5/yciO/yrdC domain-containing protein 397929 8116922 Dd1591_0360 Dickeya zeae Ech1591 SUA5/yciO/yrdC domain-containing protein YP_003002729.1 397357 D 561229 CDS YP_003002730.1 251788009 8116923 397949..398776 1 NC_012912.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: eca:ECA3995 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 398776 8116923 Dd1591_0361 Dickeya zeae Ech1591 shikimate 5-dehydrogenase YP_003002730.1 397949 D 561229 CDS YP_003002731.1 251788010 8116924 398773..399042 1 NC_012912.1 PFAM: protein of unknown function DUF1488; KEGG: eca:ECA3994 hypothetical protein; hypothetical protein 399042 8116924 Dd1591_0362 Dickeya zeae Ech1591 hypothetical protein YP_003002731.1 398773 D 561229 CDS YP_003002732.1 251788011 8116925 complement(399061..399597) 1 NC_012912.1 KEGG: eca:ECA3993 putative transferase; putative transferase 399597 8116925 Dd1591_0363 Dickeya zeae Ech1591 putative transferase YP_003002732.1 399061 R 561229 CDS YP_003002733.1 251788012 8116931 405764..406693 1 NC_012912.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 406693 8116931 Dd1591_0364 Dickeya zeae Ech1591 homoserine O-succinyltransferase YP_003002733.1 405764 D 561229 CDS YP_003002734.1 251788013 8116932 407010..408608 1 NC_012912.1 KEGG: esa:ESA_00053 malate synthase; TIGRFAM: malate synthase A; PFAM: malate synthase; malate synthase A 408608 8116932 Dd1591_0365 Dickeya zeae Ech1591 malate synthase A YP_003002734.1 407010 D 561229 CDS YP_003002735.1 251788014 8116933 408632..409939 1 NC_012912.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: eca:ECA3990 isocitrate lyase; isocitrate lyase 409939 8116933 Dd1591_0366 Dickeya zeae Ech1591 isocitrate lyase YP_003002735.1 408632 D 561229 CDS YP_003002736.1 251788015 8116934 410018..411775 1 NC_012912.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 411775 aceK 8116934 aceK Dickeya zeae Ech1591 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_003002736.1 410018 D 561229 CDS YP_003002737.1 251788016 8116935 complement(411782..412615) 1 NC_012912.1 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; transcriptional repressor IclR 412615 8116935 Dd1591_0368 Dickeya zeae Ech1591 transcriptional repressor IclR YP_003002737.1 411782 R 561229 CDS YP_003002738.1 251788017 8116936 412774..416460 1 NC_012912.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 416460 metH 8116936 metH Dickeya zeae Ech1591 B12-dependent methionine synthase YP_003002738.1 412774 D 561229 CDS YP_003002739.1 251788018 8116937 complement(416537..417991) 1 NC_012912.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: eca:ECA3984 putative sodium:sulfate symporter; anion transporter 417991 8116937 Dd1591_0370 Dickeya zeae Ech1591 anion transporter YP_003002739.1 416537 R 561229 CDS YP_003002740.1 251788019 8116938 418309..419955 1 NC_012912.1 TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: eca:ECA3983 putative sodium/phosphate cotransporter; sodium-dependent inorganic phosphate (Pi) transporter 419955 8116938 Dd1591_0371 Dickeya zeae Ech1591 sodium-dependent inorganic phosphate (Pi) transporter YP_003002740.1 418309 D 561229 CDS YP_003002741.1 251788020 8116939 complement(420034..421398) 1 NC_012912.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 421398 8116939 Dd1591_0372 Dickeya zeae Ech1591 aspartate kinase III YP_003002741.1 420034 R 561229 CDS YP_003002742.1 251788021 8116940 421905..423554 1 NC_012912.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 423554 pgi 8116940 pgi Dickeya zeae Ech1591 glucose-6-phosphate isomerase YP_003002742.1 421905 D 561229 CDS YP_003002743.1 251788022 8116941 423823..424167 1 NC_012912.1 KEGG: spe:Spro_0410 hypothetical protein; hypothetical protein 424167 8116941 Dd1591_0374 Dickeya zeae Ech1591 hypothetical protein YP_003002743.1 423823 D 561229 CDS YP_003002744.1 251788023 8116942 complement(424219..425256) 1 NC_012912.1 KEGG: eca:ECA3977 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 425256 8116942 Dd1591_0375 Dickeya zeae Ech1591 lysine 2,3-aminomutase YodO family protein YP_003002744.1 424219 R 561229 CDS YP_003002745.1 251788024 8116943 425296..425862 1 NC_012912.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 425862 8116943 Dd1591_0376 Dickeya zeae Ech1591 elongation factor P YP_003002745.1 425296 D 561229 CDS YP_003002746.1 251788025 8116944 426018..426371 1 NC_012912.1 PFAM: protein of unknown function DUF486; KEGG: eca:ECA3974 hypothetical protein; hypothetical protein 426371 8116944 Dd1591_0377 Dickeya zeae Ech1591 hypothetical protein YP_003002746.1 426018 D 561229 CDS YP_003002747.1 251788026 8116945 complement(426512..427051) 1 NC_012912.1 PFAM: Lipocalin family protein; KEGG: eca:ECA3973 outer membrane lipoprotein Blc; Lipocalin family protein 427051 8116945 Dd1591_0378 Dickeya zeae Ech1591 Lipocalin family protein YP_003002747.1 426512 R 561229 CDS YP_003002748.1 251788027 8116946 complement(427163..427519) 1 NC_012912.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 427519 8116946 Dd1591_0379 Dickeya zeae Ech1591 fumarate reductase subunit D YP_003002748.1 427163 R 561229 CDS YP_003002749.1 251788028 8118467 complement(427534..427929) 1 NC_012912.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 427929 8118467 Dd1591_0380 Dickeya zeae Ech1591 fumarate reductase subunit C YP_003002749.1 427534 R 561229 CDS YP_003002750.1 251788029 8118468 complement(427942..428676) 1 NC_012912.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 428676 8118468 Dd1591_0381 Dickeya zeae Ech1591 fumarate reductase iron-sulfur subunit YP_003002750.1 427942 R 561229 CDS YP_003002751.1 251788030 8118469 complement(428669..430465) 1 NC_012912.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 430465 8118469 Dd1591_0382 Dickeya zeae Ech1591 fumarate reductase flavoprotein subunit YP_003002751.1 428669 R 561229 CDS YP_003002752.1 251788031 8118470 430873..431850 1 NC_012912.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 431850 8118470 Dd1591_0383 Dickeya zeae Ech1591 lysyl-tRNA synthetase YP_003002752.1 430873 D 561229 CDS YP_003002753.1 251788032 8118471 complement(431986..435309) 1 NC_012912.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eca:ECA3967 hypothetical protein; hypothetical protein 435309 8118471 Dd1591_0384 Dickeya zeae Ech1591 hypothetical protein YP_003002753.1 431986 R 561229 CDS YP_003002754.1 251788033 8118472 complement(435339..436253) 1 NC_012912.1 KEGG: eca:ECA3966 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 436253 8118472 Dd1591_0385 Dickeya zeae Ech1591 phosphatidylserine decarboxylase YP_003002754.1 435339 R 561229 CDS YP_003002755.1 251788034 8118473 complement(436324..437373) 1 NC_012912.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 437373 8118473 Dd1591_0386 Dickeya zeae Ech1591 ribosome-associated GTPase YP_003002755.1 436324 R 561229 CDS YP_003002756.1 251788035 8118474 437521..438063 1 NC_012912.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: spe:Spro_0424 oligoribonuclease; Exonuclease RNase T and DNA polymerase III 438063 8118474 Dd1591_0387 Dickeya zeae Ech1591 Exonuclease RNase T and DNA polymerase III YP_003002756.1 437521 D 561229 CDS YP_003002757.1 251788036 8118476 438643..439494 1 NC_012912.1 KEGG: pen:PSEEN0738 hypothetical protein; hypothetical protein 439494 8118476 Dd1591_0388 Dickeya zeae Ech1591 hypothetical protein YP_003002757.1 438643 D 561229 CDS YP_003002758.1 251788037 8118477 439491..440810 1 NC_012912.1 KEGG: pfo:Pfl01_0146 hypothetical protein; hypothetical protein 440810 8118477 Dd1591_0389 Dickeya zeae Ech1591 hypothetical protein YP_003002758.1 439491 D 561229 CDS YP_003002759.1 251788038 8118478 440807..442930 1 NC_012912.1 PFAM: peptidase M50; KEGG: pfo:Pfl01_0147 peptidase M50; peptidase M50 442930 8118478 Dd1591_0390 Dickeya zeae Ech1591 peptidase M50 YP_003002759.1 440807 D 561229 CDS YP_003002760.1 251788039 8118479 443204..444118 1 NC_012912.1 PFAM: Tail Collar domain protein; KEGG: avi:Avi_5259 hypothetical protein; Tail Collar domain-containing protein 444118 8118479 Dd1591_0391 Dickeya zeae Ech1591 Tail Collar domain-containing protein YP_003002760.1 443204 D 561229 CDS YP_003002761.1 251788040 8118480 444285..450290 1 NC_012912.1 PFAM: Ig family protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: hch:HCH_03194 outer membrane protein domain-containing protein; Ig family protein 450290 8118480 Dd1591_0392 Dickeya zeae Ech1591 Ig family protein YP_003002761.1 444285 D 561229 CDS YP_003002762.1 251788041 8118481 450348..451856 1 NC_012912.1 KEGG: ppw:PputW619_0676 outer membrane efflux protein; outer membrane efflux protein 451856 8118481 Dd1591_0393 Dickeya zeae Ech1591 outer membrane efflux protein YP_003002762.1 450348 D 561229 CDS YP_003002763.1 251788042 8118482 complement(451977..453569) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: yen:YE0409 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 453569 8118482 Dd1591_0394 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003002763.1 451977 R 561229 CDS YP_003002764.1 251788043 8118483 454364..456034 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: yen:YE3615 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 456034 8118483 Dd1591_0395 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003002764.1 454364 D 561229 CDS YP_003002765.1 251788044 8118484 complement(456248..457144) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4199 putative DNA-binding transcriptional regulator; putative DNA-binding transcriptional regulator 457144 8118484 Dd1591_0396 Dickeya zeae Ech1591 putative DNA-binding transcriptional regulator YP_003002765.1 456248 R 561229 CDS YP_003002766.1 251788045 8118485 457304..458635 1 NC_012912.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: spe:Spro_4200 amidohydrolase; amidohydrolase 458635 8118485 Dd1591_0397 Dickeya zeae Ech1591 amidohydrolase YP_003002766.1 457304 D 561229 CDS YP_003002767.1 251788046 8118486 458632..460083 1 NC_012912.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: spe:Spro_4201 amidohydrolase; amidohydrolase 460083 8118486 Dd1591_0398 Dickeya zeae Ech1591 amidohydrolase YP_003002767.1 458632 D 561229 CDS YP_003002768.1 251788047 8118487 complement(460446..461435) 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 461435 8118487 Dd1591_0399 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003002768.1 460446 R 561229 CDS YP_003002769.1 251788048 8118488 461843..463360 1 NC_012912.1 TIGRFAM: AbgT transporter family; PFAM: AbgT putative transporter; KEGG: plu:plu3724 putative aminobenzoyl-glutamate transporter; putative aminobenzoyl-glutamate transporter 463360 abgT 8118488 abgT Dickeya zeae Ech1591 putative aminobenzoyl-glutamate transporter YP_003002769.1 461843 D 561229 CDS YP_003002770.1 251788049 8118489 463512..463982 1 NC_012912.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: eca:ECA3168 transcriptional regulator of organic hydroperoxide resistance gene ohr; MarR family transcriptional regulator 463982 8118489 Dd1591_0401 Dickeya zeae Ech1591 MarR family transcriptional regulator YP_003002770.1 463512 D 561229 CDS YP_003002771.1 251788050 8118490 464103..464528 1 NC_012912.1 PFAM: OsmC family protein; KEGG: eca:ECA3167 organic hydroperoxide resistance protein; OsmC family protein 464528 8118490 Dd1591_0402 Dickeya zeae Ech1591 OsmC family protein YP_003002771.1 464103 D 561229 CDS YP_003002772.1 251788051 8118491 464598..465608 1 NC_012912.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: psp:PSPPH_3647 lipase; alpha/beta hydrolase fold-3 domain-containing protein 465608 8118491 Dd1591_0403 Dickeya zeae Ech1591 alpha/beta hydrolase fold-3 domain-containing protein YP_003002772.1 464598 D 561229 CDS YP_003002773.1 251788052 8118492 complement(465669..466487) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2153 ABC transporter, ATP-binding protein; ABC transporter 466487 8118492 Dd1591_0404 Dickeya zeae Ech1591 ABC transporter YP_003002773.1 465669 R 561229 CDS YP_003002774.1 251788053 8118493 complement(466506..467441) 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2154 putative ABC transporter, permease; polar amino acid ABC transporter permease 467441 8118493 Dd1591_0405 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003002774.1 466506 R 561229 CDS YP_003002775.1 251788054 8118494 complement(467455..467985) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2155 putative acetyltransferase; GCN5-related N-acetyltransferase 467985 8118494 Dd1591_0406 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003002775.1 467455 R 561229 CDS YP_003002776.1 251788055 8118495 complement(468015..468962) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA2156 ABC transporter, substrate binding protein; extracellular solute-binding protein family 3 468962 8118495 Dd1591_0407 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003002776.1 468015 R 561229 CDS YP_003002777.1 251788056 8118496 complement(469037..470413) 1 NC_012912.1 KEGG: eca:ECA2158 hypothetical protein; hypothetical protein 470413 8118496 Dd1591_0408 Dickeya zeae Ech1591 hypothetical protein YP_003002777.1 469037 R 561229 CDS YP_003002778.1 251788057 8118497 470837..471826 1 NC_012912.1 PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA2161 putative luciferase-like monooxygenase; Luciferase-like monooxygenase 471826 8118497 Dd1591_0409 Dickeya zeae Ech1591 Luciferase-like monooxygenase YP_003002778.1 470837 D 561229 CDS YP_003002779.1 251788058 8118498 complement(471816..472406) 1 NC_012912.1 KEGG: ent:Ent638_0389 hypothetical protein; hypothetical protein 472406 8118498 Dd1591_0410 Dickeya zeae Ech1591 hypothetical protein YP_003002779.1 471816 R 561229 CDS YP_003002780.1 251788059 8118501 complement(475648..475902) 1 NC_012912.1 KEGG: pmr:PMI3401 sugar fermentation stimulation protein; putative transcriptional regulator Nlp 475902 8118501 Dd1591_0412 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003002780.1 475648 R 561229 CDS YP_003002781.1 251788060 8118502 complement(476340..477638) 1 NC_012912.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: eca:ECA0932 permease; cytosine/purines uracil thiamine allantoin permease 477638 8118502 Dd1591_0413 Dickeya zeae Ech1591 cytosine/purines uracil thiamine allantoin permease YP_003002781.1 476340 R 561229 CDS YP_003002782.1 251788061 8118503 complement(477663..478331) 1 NC_012912.1 PFAM: PAS fold-4 domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: yen:YE0514 putative transcriptional regulator; LuxR family transcriptional regulator 478331 8118503 Dd1591_0414 Dickeya zeae Ech1591 LuxR family transcriptional regulator YP_003002782.1 477663 R 561229 CDS YP_003002783.1 251788062 8118504 478529..478816 1 NC_012912.1 KEGG: spe:Spro_0470 putative transcriptional regulator, Nlp; putative transcriptional regulator Nlp 478816 8118504 Dd1591_0415 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003002783.1 478529 D 561229 CDS YP_003002784.1 251788063 8118506 480420..480938 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein; Hcp1 family type VI secretion system effector 480938 8118506 Dd1591_0417 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003002784.1 480420 D 561229 CDS YP_003002785.1 251788064 8118507 481104..482957 1 NC_012912.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 putative rhs accessory genetic element; type VI secretion system Vgr family protein 482957 8118507 Dd1591_0418 Dickeya zeae Ech1591 type VI secretion system Vgr family protein YP_003002785.1 481104 D 561229 CDS YP_003002786.1 251788065 8118508 482971..483378 1 NC_012912.1 PFAM: Domain of unknown function DUF1795; KEGG: eca:ECA2868 hypothetical protein; hypothetical protein 483378 8118508 Dd1591_0419 Dickeya zeae Ech1591 hypothetical protein YP_003002786.1 482971 D 561229 CDS YP_003002787.1 251788066 8118509 483390..487817 1 NC_012912.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; PAAR repeat-containing protein; KEGG: eca:ECA4278 rhs-family protein; YD repeat protein 487817 8118509 Dd1591_0420 Dickeya zeae Ech1591 YD repeat protein YP_003002787.1 483390 D 561229 CDS YP_003002788.1 251788067 8118510 487820..488224 1 NC_012912.1 KEGG: esa:ESA_03890 hypothetical protein; hypothetical protein 488224 8118510 Dd1591_0421 Dickeya zeae Ech1591 hypothetical protein YP_003002788.1 487820 D 561229 CDS YP_003002789.1 251788068 8118511 488695..488955 1 NC_012912.1 hypothetical protein 488955 8118511 Dd1591_0422 Dickeya zeae Ech1591 hypothetical protein YP_003002789.1 488695 D 561229 CDS YP_003002790.1 251788069 8118513 489756..491357 1 NC_012912.1 PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: eca:ECA3435 putative sigma-54 dependent transcriptional regulator; Sigma 54 interacting domain-containing protein 491357 8118513 Dd1591_0424 Dickeya zeae Ech1591 Sigma 54 interacting domain-containing protein YP_003002790.1 489756 D 561229 CDS YP_003002791.1 251788070 8118514 complement(491443..493242) 1 NC_012912.1 PFAM: Relaxase; protein of unknown function DUF1528; KEGG: bpt:Bpet1092 putative helicase; Relaxase 493242 8118514 Dd1591_0425 Dickeya zeae Ech1591 Relaxase YP_003002791.1 491443 R 561229 CDS YP_003002792.1 251788071 8118515 493556..494524 1 NC_012912.1 hypothetical protein 494524 8118515 Dd1591_0426 Dickeya zeae Ech1591 hypothetical protein YP_003002792.1 493556 D 561229 CDS YP_003002793.1 251788072 8118516 494726..495091 1 NC_012912.1 KEGG: pla:Plav_3432 hypothetical protein; hypothetical protein 495091 8118516 Dd1591_0427 Dickeya zeae Ech1591 hypothetical protein YP_003002793.1 494726 D 561229 CDS YP_003002794.1 251788073 8118517 complement(495098..496621) 1 NC_012912.1 KEGG: pla:Plav_3431 hypothetical protein; hypothetical protein 496621 8118517 Dd1591_0428 Dickeya zeae Ech1591 hypothetical protein YP_003002794.1 495098 R 561229 CDS YP_003002795.1 251788074 8118518 complement(496633..496983) 1 NC_012912.1 KEGG: bpt:Bpet1504 hypothetical protein; hypothetical protein 496983 8118518 Dd1591_0429 Dickeya zeae Ech1591 hypothetical protein YP_003002795.1 496633 R 561229 CDS YP_003002796.1 251788075 8118519 complement(496980..498380) 1 NC_012912.1 KEGG: net:Neut_0075 hypothetical protein; hypothetical protein 498380 8118519 Dd1591_0430 Dickeya zeae Ech1591 hypothetical protein YP_003002796.1 496980 R 561229 CDS YP_003002797.1 251788076 8118520 complement(498388..499314) 1 NC_012912.1 PFAM: protein of unknown function DUF1527; KEGG: eba:ebA2511 hypothetical protein; hypothetical protein 499314 8118520 Dd1591_0431 Dickeya zeae Ech1591 hypothetical protein YP_003002797.1 498388 R 561229 CDS YP_003002798.1 251788077 8118521 complement(499311..499769) 1 NC_012912.1 PFAM: protein of unknown function DUF1525; KEGG: ajs:Ajs_2183 hypothetical protein; hypothetical protein 499769 8118521 Dd1591_0432 Dickeya zeae Ech1591 hypothetical protein YP_003002798.1 499311 R 561229 CDS YP_003002799.1 251788078 8118522 499921..500532 1 NC_012912.1 KEGG: maq:Maqu_0393 hypothetical protein; hypothetical protein 500532 8118522 Dd1591_0433 Dickeya zeae Ech1591 hypothetical protein YP_003002799.1 499921 D 561229 CDS YP_003002800.1 251788079 8118523 500525..501544 1 NC_012912.1 PFAM: Domain of unknown function DUF1814; KEGG: maq:Maqu_0394 hypothetical protein; hypothetical protein 501544 8118523 Dd1591_0434 Dickeya zeae Ech1591 hypothetical protein YP_003002800.1 500525 D 561229 CDS YP_003002801.1 251788080 8118524 complement(501545..504394) 1 NC_012912.1 KEGG: net:Neut_0086 hypothetical protein; hypothetical protein 504394 8118524 Dd1591_0435 Dickeya zeae Ech1591 hypothetical protein YP_003002801.1 501545 R 561229 CDS YP_003002802.1 251788081 8118525 complement(504394..504831) 1 NC_012912.1 KEGG: net:Neut_0087 putative secreted protein; putative secreted protein 504831 8118525 Dd1591_0436 Dickeya zeae Ech1591 putative secreted protein YP_003002802.1 504394 R 561229 CDS YP_003002803.1 251788082 8118526 complement(504812..506212) 1 NC_012912.1 KEGG: xcv:XCV2369 putative secreted protein; putative secreted protein 506212 8118526 Dd1591_0437 Dickeya zeae Ech1591 putative secreted protein YP_003002803.1 504812 R 561229 CDS YP_003002804.1 251788083 8118527 complement(506202..507095) 1 NC_012912.1 KEGG: har:HEAR2017 putative signal peptide; putative signal peptide 507095 8118527 Dd1591_0438 Dickeya zeae Ech1591 putative signal peptide YP_003002804.1 506202 R 561229 CDS YP_003002805.1 251788084 8118528 complement(507092..507772) 1 NC_012912.1 KEGG: net:Neut_0090 putative secreted protein; putative secreted protein 507772 8118528 Dd1591_0439 Dickeya zeae Ech1591 putative secreted protein YP_003002805.1 507092 R 561229 CDS YP_003002806.1 251788085 8118529 complement(507769..508167) 1 NC_012912.1 KEGG: ajs:Ajs_1403 hypothetical protein; hypothetical protein 508167 8118529 Dd1591_0440 Dickeya zeae Ech1591 hypothetical protein YP_003002806.1 507769 R 561229 CDS YP_003002807.1 251788086 8118530 complement(508180..508539) 1 NC_012912.1 KEGG: bxe:Bxe_A1190 hypothetical protein; hypothetical protein 508539 8118530 Dd1591_0441 Dickeya zeae Ech1591 hypothetical protein YP_003002807.1 508180 R 561229 CDS YP_003002808.1 251788087 8118531 complement(508558..508791) 1 NC_012912.1 KEGG: net:Neut_0093 hypothetical protein; hypothetical protein 508791 8118531 Dd1591_0442 Dickeya zeae Ech1591 hypothetical protein YP_003002808.1 508558 R 561229 CDS YP_003002809.1 251788088 8118532 complement(508788..509165) 1 NC_012912.1 KEGG: net:Neut_0094 hypothetical protein; hypothetical protein 509165 8118532 Dd1591_0443 Dickeya zeae Ech1591 hypothetical protein YP_003002809.1 508788 R 561229 CDS YP_003002810.1 251788089 8118533 509418..509831 1 NC_012912.1 PFAM: Domain of unknown function DUF1863; KEGG: mgm:Mmc1_3118 hypothetical protein; hypothetical protein 509831 8118533 Dd1591_0444 Dickeya zeae Ech1591 hypothetical protein YP_003002810.1 509418 D 561229 CDS YP_003002811.1 251788090 8118534 509859..511130 1 NC_012912.1 KEGG: azo:azo3763 hypothetical protein; hypothetical protein 511130 8118534 Dd1591_0445 Dickeya zeae Ech1591 hypothetical protein YP_003002811.1 509859 D 561229 CDS YP_003002812.1 251788091 8118535 511335..512450 1 NC_012912.1 KEGG: sse:Ssed_3748 hypothetical protein; hypothetical protein 512450 8118535 Dd1591_0446 Dickeya zeae Ech1591 hypothetical protein YP_003002812.1 511335 D 561229 CDS YP_003002813.1 251788092 8118536 complement(512527..513276) 1 NC_012912.1 KEGG: xcv:XCV2376 hypothetical protein; hypothetical protein 513276 8118536 Dd1591_0447 Dickeya zeae Ech1591 hypothetical protein YP_003002813.1 512527 R 561229 CDS YP_003002814.1 251788093 8118537 complement(513273..515432) 1 NC_012912.1 KEGG: net:Neut_0098 hypothetical protein; hypothetical protein 515432 8118537 Dd1591_0448 Dickeya zeae Ech1591 hypothetical protein YP_003002814.1 513273 R 561229 CDS YP_003002815.1 251788094 8118538 complement(515437..515979) 1 NC_012912.1 KEGG: pla:Plav_3413 hypothetical protein; hypothetical protein 515979 8118538 Dd1591_0449 Dickeya zeae Ech1591 hypothetical protein YP_003002815.1 515437 R 561229 CDS YP_003002816.1 251788095 8118539 complement(515976..516566) 1 NC_012912.1 KEGG: har:HEAR2003 putative signal peptide; putative signal peptide 516566 8118539 Dd1591_0450 Dickeya zeae Ech1591 putative signal peptide YP_003002816.1 515976 R 561229 CDS YP_003002817.1 251788096 8118540 complement(516548..517255) 1 NC_012912.1 KEGG: ajs:Ajs_1277 putative secreted protein; putative secreted protein 517255 8118540 Dd1591_0451 Dickeya zeae Ech1591 putative secreted protein YP_003002817.1 516548 R 561229 CDS YP_003002818.1 251788097 8118541 complement(517267..517917) 1 NC_012912.1 KEGG: net:Neut_0102 hypothetical protein; hypothetical protein 517917 8118541 Dd1591_0452 Dickeya zeae Ech1591 hypothetical protein YP_003002818.1 517267 R 561229 CDS YP_003002819.1 251788098 8118542 complement(517914..518483) 1 NC_012912.1 KEGG: ajs:Ajs_1279 putative secreted protein; putative secreted protein 518483 8118542 Dd1591_0453 Dickeya zeae Ech1591 putative secreted protein YP_003002819.1 517914 R 561229 CDS YP_003002820.1 251788099 8118543 519035..520168 1 NC_012912.1 KEGG: mms:mma_3162 integrase; integrase 520168 8118543 Dd1591_0454 Dickeya zeae Ech1591 integrase YP_003002820.1 519035 D 561229 CDS YP_003002821.1 251788100 8118544 complement(520325..521326) 1 NC_012912.1 KEGG: eca:ECA1658 hypothetical protein; hypothetical protein 521326 8118544 Dd1591_0455 Dickeya zeae Ech1591 hypothetical protein YP_003002821.1 520325 R 561229 CDS YP_003002822.1 251788101 8118545 521692..522492 1 NC_012912.1 hypothetical protein 522492 8118545 Dd1591_0456 Dickeya zeae Ech1591 hypothetical protein YP_003002822.1 521692 D 561229 CDS YP_003002823.1 251788102 8118546 complement(523485..525764) 1 NC_012912.1 SMART: DEAD-like helicase; KEGG: net:Neut_0104 helicase domain-containing protein; DEAD-like helicase 525764 8118546 Dd1591_0457 Dickeya zeae Ech1591 DEAD-like helicase YP_003002823.1 523485 R 561229 CDS YP_003002824.1 251788103 8120061 complement(525900..527009) 1 NC_012912.1 KEGG: net:Neut_0106 hypothetical protein; hypothetical protein 527009 8120061 Dd1591_0458 Dickeya zeae Ech1591 hypothetical protein YP_003002824.1 525900 R 561229 CDS YP_003002825.1 251788104 8120194 complement(527079..527723) 1 NC_012912.1 KEGG: net:Neut_0107 hypothetical protein; hypothetical protein 527723 8120194 Dd1591_0459 Dickeya zeae Ech1591 hypothetical protein YP_003002825.1 527079 R 561229 CDS YP_003002826.1 251788105 8120195 complement(527842..528186) 1 NC_012912.1 KEGG: net:Neut_0109 plasmid-related protein; hypothetical protein 528186 8120195 Dd1591_0460 Dickeya zeae Ech1591 hypothetical protein YP_003002826.1 527842 R 561229 CDS YP_003002827.1 251788106 8120196 complement(528277..528939) 1 NC_012912.1 KEGG: rme:Rmet_2322 hypothetical protein; hypothetical protein 528939 8120196 Dd1591_0461 Dickeya zeae Ech1591 hypothetical protein YP_003002827.1 528277 R 561229 CDS YP_003002828.1 251788107 8120197 complement(529022..529915) 1 NC_012912.1 KEGG: pla:Plav_3399 hypothetical protein; hypothetical protein 529915 8120197 Dd1591_0462 Dickeya zeae Ech1591 hypothetical protein YP_003002828.1 529022 R 561229 CDS YP_003002829.1 251788108 8120198 complement(530420..530785) 1 NC_012912.1 KEGG: eba:ebB76 hypothetical protein; hypothetical protein 530785 8120198 Dd1591_0463 Dickeya zeae Ech1591 hypothetical protein YP_003002829.1 530420 R 561229 CDS YP_003002830.1 251788109 8120199 complement(530934..531731) 1 NC_012912.1 KEGG: eba:ebA2454 hypothetical protein; hypothetical protein 531731 8120199 Dd1591_0464 Dickeya zeae Ech1591 hypothetical protein YP_003002830.1 530934 R 561229 CDS YP_003002831.1 251788110 8120200 complement(532114..533586) 1 NC_012912.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: bxe:Bxe_A1222 C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 533586 8120200 Dd1591_0465 Dickeya zeae Ech1591 DNA-cytosine methyltransferase YP_003002831.1 532114 R 561229 CDS YP_003002832.1 251788111 8120201 complement(534110..536122) 1 NC_012912.1 KEGG: xcv:XCV2287 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase III 536122 8120201 Dd1591_0466 Dickeya zeae Ech1591 DNA topoisomerase III YP_003002832.1 534110 R 561229 CDS YP_003002833.1 251788112 8120203 536742..536996 1 NC_012912.1 hypothetical protein 536996 8120203 Dd1591_0468 Dickeya zeae Ech1591 hypothetical protein YP_003002833.1 536742 D 561229 CDS YP_003002834.1 251788113 8120205 537627..538796 1 NC_012912.1 KEGG: xac:XAC2263 hypothetical protein; hypothetical protein 538796 8120205 Dd1591_0470 Dickeya zeae Ech1591 hypothetical protein YP_003002834.1 537627 D 561229 CDS YP_003002835.1 251788114 8120206 538793..539254 1 NC_012912.1 KEGG: xac:XAC2262 hypothetical protein; hypothetical protein 539254 8120206 Dd1591_0471 Dickeya zeae Ech1591 hypothetical protein YP_003002835.1 538793 D 561229 CDS YP_003002836.1 251788115 8120207 539251..541245 1 NC_012912.1 KEGG: ppu:PP_4535 hypothetical protein; hypothetical protein 541245 8120207 Dd1591_0472 Dickeya zeae Ech1591 hypothetical protein YP_003002836.1 539251 D 561229 CDS YP_003002837.1 251788116 8120208 complement(541353..541754) 1 NC_012912.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 541754 8120208 Dd1591_0473 Dickeya zeae Ech1591 single-stranded DNA-binding protein YP_003002837.1 541353 R 561229 CDS YP_003002838.1 251788117 8120209 complement(541845..542375) 1 NC_012912.1 KEGG: tmz:Tmz1t_0992 hypothetical protein; hypothetical protein 542375 8120209 Dd1591_0474 Dickeya zeae Ech1591 hypothetical protein YP_003002838.1 541845 R 561229 CDS YP_003002839.1 251788118 8120210 complement(542372..543190) 1 NC_012912.1 PFAM: Domain of unknown function DUF1845; KEGG: bpt:Bpet1294 hypothetical protein; hypothetical protein 543190 8120210 Dd1591_0475 Dickeya zeae Ech1591 hypothetical protein YP_003002839.1 542372 R 561229 CDS YP_003002840.1 251788119 8120211 complement(543374..544588) 1 NC_012912.1 KEGG: bpt:Bpet1293 hypothetical protein; hypothetical protein 544588 8120211 Dd1591_0476 Dickeya zeae Ech1591 hypothetical protein YP_003002840.1 543374 R 561229 CDS YP_003002841.1 251788120 8120212 complement(544588..545148) 1 NC_012912.1 KEGG: bpt:Bpet1292 hypothetical protein; hypothetical protein 545148 8120212 Dd1591_0477 Dickeya zeae Ech1591 hypothetical protein YP_003002841.1 544588 R 561229 CDS YP_003002842.1 251788121 8120213 complement(545160..546884) 1 NC_012912.1 KEGG: bpt:Bpet1291 hypothetical protein; hypothetical protein 546884 8120213 Dd1591_0478 Dickeya zeae Ech1591 hypothetical protein YP_003002842.1 545160 R 561229 CDS YP_003002843.1 251788122 8120214 complement(546892..547137) 1 NC_012912.1 KEGG: bpt:ig_0609 hypothetical protein; hypothetical protein 547137 8120214 Dd1591_0479 Dickeya zeae Ech1591 hypothetical protein YP_003002843.1 546892 R 561229 CDS YP_003002844.1 251788123 8120215 complement(547121..547828) 1 NC_012912.1 KEGG: bpt:Bpet1290 hypothetical protein; hypothetical protein 547828 8120215 Dd1591_0480 Dickeya zeae Ech1591 hypothetical protein YP_003002844.1 547121 R 561229 CDS YP_003002845.1 251788124 8120216 complement(547862..548074) 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: bpt:Bpet1289 putative transcriptional regulator (phage-related); phage transcriptional regulator AlpA 548074 8120216 Dd1591_0481 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003002845.1 547862 R 561229 CDS YP_003002846.1 251788125 8120220 549326..550252 1 NC_012912.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: eca:ECA3947 putative D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 550252 8120220 Dd1591_0485 Dickeya zeae Ech1591 D-isomer specific 2-hydroxyacid dehydrogenase YP_003002846.1 549326 D 561229 CDS YP_003002847.1 251788126 8120222 complement(550826..551965) 1 NC_012912.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA3940 putative 4Fe-4S binding protein; iron-sulfur cluster binding protein 551965 8120222 Dd1591_0486 Dickeya zeae Ech1591 iron-sulfur cluster binding protein YP_003002847.1 550826 R 561229 CDS YP_003002848.1 251788127 8120223 552176..553717 1 NC_012912.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: eca:ECA3939 hypothetical protein; hypothetical protein 553717 8120223 Dd1591_0487 Dickeya zeae Ech1591 hypothetical protein YP_003002848.1 552176 D 561229 CDS YP_003002849.1 251788128 8120224 553714..554196 1 NC_012912.1 PFAM: protein of unknown function UPF0079; KEGG: spe:Spro_0427 putative ATPase; hypothetical protein 554196 8120224 Dd1591_0488 Dickeya zeae Ech1591 hypothetical protein YP_003002849.1 553714 D 561229 CDS YP_003002850.1 251788129 8120225 554193..555875 1 NC_012912.1 PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM; KEGG: eca:ECA3937 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 555875 8120225 Dd1591_0489 Dickeya zeae Ech1591 cell wall hydrolase/autolysin YP_003002850.1 554193 D 561229 CDS YP_003002851.1 251788130 8120226 555899..557848 1 NC_012912.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 557848 mutL 8120226 mutL Dickeya zeae Ech1591 DNA mismatch repair protein YP_003002851.1 555899 D 561229 CDS YP_003002852.1 251788131 8120227 557841..558782 1 NC_012912.1 KEGG: eca:ECA3935 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 558782 8120227 Dd1591_0491 Dickeya zeae Ech1591 tRNA delta(2)-isopentenylpyrophosphate transferase YP_003002852.1 557841 D 561229 CDS YP_003002853.1 251788132 8120228 558909..559208 1 NC_012912.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 559208 hfq 8120228 hfq Dickeya zeae Ech1591 RNA-binding protein Hfq YP_003002853.1 558909 D 561229 CDS YP_003002854.1 251788133 8120229 559298..560599 1 NC_012912.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; putative GTPase HflX 560599 8120229 Dd1591_0493 Dickeya zeae Ech1591 putative GTPase HflX YP_003002854.1 559298 D 561229 CDS YP_003002855.1 251788134 8120230 560651..561913 1 NC_012912.1 KEGG: eca:ECA3932 FtsH protease regulator HflK; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein 561913 8120230 Dd1591_0494 Dickeya zeae Ech1591 HflK protein YP_003002855.1 560651 D 561229 CDS YP_003002856.1 251788135 8120231 561917..562912 1 NC_012912.1 with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 562912 8120231 Dd1591_0495 Dickeya zeae Ech1591 FtsH protease regulator HflC YP_003002856.1 561917 D 561229 CDS YP_003002857.1 251788136 8120232 562976..563176 1 NC_012912.1 KEGG: eca:ECA3930 hypothetical protein; hypothetical protein 563176 8120232 Dd1591_0496 Dickeya zeae Ech1591 hypothetical protein YP_003002857.1 562976 D 561229 CDS YP_003002858.1 251788137 8120233 563276..564574 1 NC_012912.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 564574 8120233 Dd1591_0497 Dickeya zeae Ech1591 adenylosuccinate synthetase YP_003002858.1 563276 D 561229 CDS YP_003002859.1 251788138 8120234 complement(564685..566067) 1 NC_012912.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: eca:ECA3928 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 566067 8120234 Dd1591_0498 Dickeya zeae Ech1591 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_003002859.1 564685 R 561229 CDS YP_003002860.1 251788139 8120235 566238..567242 1 NC_012912.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 567242 8120235 Dd1591_0499 Dickeya zeae Ech1591 fructose-1,6-bisphosphatase YP_003002860.1 566238 D 561229 CDS YP_003002861.1 251788140 8120236 complement(567322..567753) 1 NC_012912.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 567753 8120236 Dd1591_0500 Dickeya zeae Ech1591 Holliday junction resolvase-like protein YP_003002861.1 567322 R 561229 CDS YP_003002862.1 251788141 8120237 complement(567753..568316) 1 NC_012912.1 PFAM: protein of unknown function DUF179; KEGG: eca:ECA3925 hypothetical protein; hypothetical protein 568316 8120237 Dd1591_0501 Dickeya zeae Ech1591 hypothetical protein YP_003002862.1 567753 R 561229 CDS YP_003002863.1 251788142 8120238 complement(568444..569397) 1 NC_012912.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 569397 8120238 Dd1591_0502 Dickeya zeae Ech1591 glutathione synthetase YP_003002863.1 568444 R 561229 CDS YP_003002864.1 251788143 8120239 complement(569409..570143) 1 NC_012912.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 570143 8120239 Dd1591_0503 Dickeya zeae Ech1591 16S ribosomal RNA methyltransferase RsmE YP_003002864.1 569409 R 561229 CDS YP_003002865.1 251788144 8120240 complement(570275..570976) 1 NC_012912.1 PFAM: Endonuclease I; KEGG: eca:ECA3922 endonuclease; Deoxyribonuclease I 570976 8120240 Dd1591_0504 Dickeya zeae Ech1591 Deoxyribonuclease I YP_003002865.1 570275 R 561229 CDS YP_003002866.1 251788145 8120241 complement(571075..571587) 1 NC_012912.1 PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: eca:ECA3921 hypothetical protein; hypothetical protein 571587 8120241 Dd1591_0505 Dickeya zeae Ech1591 hypothetical protein YP_003002866.1 571075 R 561229 CDS YP_003002867.1 251788146 8120242 complement(571700..572854) 1 NC_012912.1 KEGG: eca:ECA3920 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 572854 8120242 Dd1591_0506 Dickeya zeae Ech1591 S-adenosylmethionine synthetase YP_003002867.1 571700 R 561229 CDS YP_003002868.1 251788147 8120243 573631..573789 1 NC_012912.1 hypothetical protein 573789 8120243 Dd1591_0507 Dickeya zeae Ech1591 hypothetical protein YP_003002868.1 573631 D 561229 CDS YP_003002869.1 251788148 8120244 573782..575758 1 NC_012912.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 575758 8120244 Dd1591_0508 Dickeya zeae Ech1591 arginine decarboxylase YP_003002869.1 573782 D 561229 CDS YP_003002870.1 251788149 8120245 575985..577178 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4593 hypothetical protein; hypothetical protein 577178 8120245 Dd1591_0509 Dickeya zeae Ech1591 hypothetical protein YP_003002870.1 575985 D 561229 CDS YP_003002871.1 251788150 8120246 577557..579551 1 NC_012912.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: eca:ECA0861 transketolase; transketolase 579551 8120246 Dd1591_0510 Dickeya zeae Ech1591 transketolase YP_003002871.1 577557 D 561229 CDS YP_003002872.1 251788151 8120247 complement(579611..580936) 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 580936 8120247 Dd1591_0511 Dickeya zeae Ech1591 transposase IS4 family protein YP_003002872.1 579611 R 561229 CDS YP_003002873.1 251788152 8120248 581313..582329 1 NC_012912.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 582329 8120248 Dd1591_0512 Dickeya zeae Ech1591 erythrose 4-phosphate dehydrogenase YP_003002873.1 581313 D 561229 CDS YP_003002874.1 251788153 8120249 582396..583559 1 NC_012912.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 583559 pgk 8120249 pgk Dickeya zeae Ech1591 phosphoglycerate kinase YP_003002874.1 582396 D 561229 CDS YP_003002875.1 251788154 8120250 583746..584822 1 NC_012912.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 584822 8120250 Dd1591_0514 Dickeya zeae Ech1591 fructose-bisphosphate aldolase YP_003002875.1 583746 D 561229 CDS YP_003002876.1 251788155 8120251 584949..585827 1 NC_012912.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: eca:ECA3910 putative mechanosensitive ion channel; MscS Mechanosensitive ion channel 585827 8120251 Dd1591_0515 Dickeya zeae Ech1591 MscS Mechanosensitive ion channel YP_003002876.1 584949 D 561229 CDS YP_003002877.1 251788156 8120252 585959..586777 1 NC_012912.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: spe:Spro_3928 IclR family transcriptional regulator; IclR family transcriptional regulator 586777 8120252 Dd1591_0516 Dickeya zeae Ech1591 IclR family transcriptional regulator YP_003002877.1 585959 D 561229 CDS YP_003002878.1 251788157 8120253 586863..587618 1 NC_012912.1 PFAM: protein of unknown function DUF541; KEGG: eca:ECA3908 hypothetical protein; hypothetical protein 587618 8120253 Dd1591_0517 Dickeya zeae Ech1591 hypothetical protein YP_003002878.1 586863 D 561229 CDS YP_003002879.1 251788158 8120254 complement(587642..588535) 1 NC_012912.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 588535 8120254 Dd1591_0518 Dickeya zeae Ech1591 chromosome replication initiation inhibitor protein YP_003002879.1 587642 R 561229 CDS YP_003002880.1 251788159 8120255 588732..589394 1 NC_012912.1 KEGG: eca:ECA3906 ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 589394 8120255 Dd1591_0519 Dickeya zeae Ech1591 ribose 5-phosphate isomerase YP_003002880.1 588732 D 561229 CDS YP_003002881.1 251788160 8120256 589747..590979 1 NC_012912.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 590979 8120256 Dd1591_0520 Dickeya zeae Ech1591 D-3-phosphoglycerate dehydrogenase YP_003002881.1 589747 D 561229 CDS YP_003002882.1 251788161 8120257 complement(591072..592073) 1 NC_012912.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eca:ECA3904 putative zinc-binding dehydrogenase; zinc-binding alcohol dehydrogenase family protein 592073 8120257 Dd1591_0521 Dickeya zeae Ech1591 zinc-binding alcohol dehydrogenase family protein YP_003002882.1 591072 R 561229 CDS YP_003002883.1 251788162 8120258 592184..593080 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3903 LysR family transcriptional activator; LysR family transcriptional regulator 593080 8120258 Dd1591_0522 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003002883.1 592184 D 561229 CDS YP_003002884.1 251788163 8120259 593514..595220 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3902 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 595220 8120259 Dd1591_0523 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003002884.1 593514 D 561229 CDS YP_003002885.1 251788164 8120260 complement(595350..597014) 1 NC_012912.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 597014 8120260 Dd1591_0524 Dickeya zeae Ech1591 putative ABC transporter ATP-binding protein YP_003002885.1 595350 R 561229 CDS YP_003002886.1 251788165 8120261 597474..599405 1 NC_012912.1 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 599405 8120261 Dd1591_0525 Dickeya zeae Ech1591 lytic murein transglycosylase YP_003002886.1 597474 D 561229 CDS YP_003002887.1 251788166 8120262 599586..599918 1 NC_012912.1 TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: eca:ECA3899 Trp operon repressor; Trp operon repressor 599918 8120262 Dd1591_0526 Dickeya zeae Ech1591 Trp operon repressor YP_003002887.1 599586 D 561229 CDS YP_003002888.1 251788167 8120263 complement(599933..600472) 1 NC_012912.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 600472 8120263 Dd1591_0527 Dickeya zeae Ech1591 NTPase YP_003002888.1 599933 R 561229 CDS YP_003002889.1 251788168 8120264 600524..601174 1 NC_012912.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 601174 8120264 Dd1591_0528 Dickeya zeae Ech1591 phosphoglycerate mutase YP_003002889.1 600524 D 561229 CDS YP_003002890.1 251788169 8120265 complement(601171..602037) 1 NC_012912.1 PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA3896 right origin-binding protein; AraC family transcriptional regulator 602037 8120265 Dd1591_0529 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003002890.1 601171 R 561229 CDS YP_003002891.1 251788170 8120266 602237..602713 1 NC_012912.1 PFAM: CreA family protein; KEGG: eca:ECA3894 hypothetical protein; hypothetical protein 602713 8120266 Dd1591_0530 Dickeya zeae Ech1591 hypothetical protein YP_003002891.1 602237 D 561229 CDS YP_003002892.1 251788171 8120267 complement(602787..603503) 1 NC_012912.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA3893 two-component response regulator; two-component response regulator 603503 8120267 Dd1591_0531 Dickeya zeae Ech1591 two-component response regulator YP_003002892.1 602787 R 561229 CDS YP_003002893.1 251788172 8120268 604071..604772 1 NC_012912.1 member of the SPOUT superfamily of methyltransferases; putative RNA methyltransferase 604772 8120268 Dd1591_0532 Dickeya zeae Ech1591 putative RNA methyltransferase YP_003002893.1 604071 D 561229 CDS YP_003002894.1 251788173 8120269 605210..607666 1 NC_012912.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 607666 thrA 8120269 thrA Dickeya zeae Ech1591 bifunctional aspartokinase I/homoserine dehydrogenase I YP_003002894.1 605210 D 561229 CDS YP_003002895.1 251788174 8120270 607669..608598 1 NC_012912.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 608598 8120270 Dd1591_0534 Dickeya zeae Ech1591 homoserine kinase YP_003002895.1 607669 D 561229 CDS YP_003002896.1 251788175 8120271 608602..609891 1 NC_012912.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 609891 8120271 Dd1591_0535 Dickeya zeae Ech1591 threonine synthase YP_003002896.1 608602 D 561229 CDS YP_003002897.1 251788176 8120272 complement(609984..610766) 1 NC_012912.1 PFAM: protein of unknown function DUF328; KEGG: eca:ECA3888 hypothetical protein; hypothetical protein 610766 8120272 Dd1591_0536 Dickeya zeae Ech1591 hypothetical protein YP_003002897.1 609984 R 561229 CDS YP_003002898.1 251788177 8120273 611069..612022 1 NC_012912.1 KEGG: eca:ECA3887 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 612022 8120273 Dd1591_0537 Dickeya zeae Ech1591 transaldolase B YP_003002898.1 611069 D 561229 CDS YP_003002899.1 251788178 8119821 complement(612049..613194) 1 NC_012912.1 KEGG: eca:ECA3886 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 613194 8119821 Dd1591_0538 Dickeya zeae Ech1591 diguanylate cyclase YP_003002899.1 612049 R 561229 CDS YP_003002900.1 251788179 8119822 613589..614176 1 NC_012912.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 614176 mogA 8119822 mogA Dickeya zeae Ech1591 molybdenum cofactor biosynthesis protein MogA YP_003002900.1 613589 D 561229 CDS YP_003002901.1 251788180 8119823 614306..615643 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA3884 putative transport protein; major facilitator superfamily protein 615643 8119823 Dd1591_0540 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003002901.1 614306 D 561229 CDS YP_003002902.1 251788181 8119824 complement(615732..616304) 1 NC_012912.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: eca:ECA3883 hypothetical protein; hypothetical protein 616304 8119824 Dd1591_0541 Dickeya zeae Ech1591 hypothetical protein YP_003002902.1 615732 R 561229 CDS YP_003002903.1 251788182 8119825 616690..618600 1 NC_012912.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 618600 dnaK 8119825 dnaK Dickeya zeae Ech1591 molecular chaperone DnaK YP_003002903.1 616690 D 561229 CDS YP_003002904.1 251788183 8119826 618711..619844 1 NC_012912.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 619844 8119826 Dd1591_0543 Dickeya zeae Ech1591 chaperone protein DnaJ YP_003002904.1 618711 D 561229 CDS YP_003002905.1 251788184 8119827 620009..621214 1 NC_012912.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 621214 nhaA 8119827 nhaA Dickeya zeae Ech1591 pH-dependent sodium/proton antiporter YP_003002905.1 620009 D 561229 CDS YP_003002906.1 251788185 8119828 621237..622127 1 NC_012912.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 622127 nhaR 8119828 nhaR Dickeya zeae Ech1591 transcriptional activator NhaR YP_003002906.1 621237 D 561229 CDS YP_003002907.1 251788186 8119829 complement(622204..622467) 1 NC_012912.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 622467 rpsT 8119829 rpsT Dickeya zeae Ech1591 30S ribosomal protein S20 YP_003002907.1 622204 R 561229 CDS YP_003002908.1 251788187 8119830 622865..623806 1 NC_012912.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 623806 8119830 Dd1591_0547 Dickeya zeae Ech1591 bifunctional riboflavin kinase/FMN adenylyltransferase YP_003002908.1 622865 D 561229 CDS YP_003002909.1 251788188 8119831 623841..626666 1 NC_012912.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 626666 ileS 8119831 ileS Dickeya zeae Ech1591 isoleucyl-tRNA synthetase YP_003002909.1 623841 D 561229 CDS YP_003002910.1 251788189 8119832 626666..627178 1 NC_012912.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 627178 lspA 8119832 lspA Dickeya zeae Ech1591 lipoprotein signal peptidase YP_003002910.1 626666 D 561229 CDS YP_003002911.1 251788190 8119833 627182..627640 1 NC_012912.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: eca:ECA3874 FkbP-type 16 kDa peptidyl-prolyl cis-trans isomerase; peptidylprolyl isomerase FKBP-type 627640 8119833 Dd1591_0550 Dickeya zeae Ech1591 peptidylprolyl isomerase FKBP-type YP_003002911.1 627182 D 561229 CDS YP_003002912.1 251788191 8119834 627637..628587 1 NC_012912.1 KEGG: eca:ECA3873 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 628587 8119834 Dd1591_0551 Dickeya zeae Ech1591 hydroxymethylbutenyl pyrophosphate reductase YP_003002912.1 627637 D 561229 CDS YP_003002913.1 251788192 8119835 628659..629576 1 NC_012912.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; ribonucleoside hydrolase RihC 629576 8119835 Dd1591_0552 Dickeya zeae Ech1591 ribonucleoside hydrolase RihC YP_003002913.1 628659 D 561229 CDS YP_003002914.1 251788193 8119836 629781..630602 1 NC_012912.1 KEGG: kpn:KPN_00039 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 630602 8119836 Dd1591_0553 Dickeya zeae Ech1591 dihydrodipicolinate reductase YP_003002914.1 629781 D 561229 CDS YP_003002915.1 251788194 8119837 631057..632202 1 NC_012912.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: eca:ECA3871 carbamoyl phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit 632202 8119837 Dd1591_0554 Dickeya zeae Ech1591 carbamoyl-phosphate synthase small subunit YP_003002915.1 631057 D 561229 CDS YP_003002916.1 251788195 8119838 632290..635514 1 NC_012912.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 635514 carB 8119838 carB Dickeya zeae Ech1591 carbamoyl phosphate synthase large subunit YP_003002916.1 632290 D 561229 CDS YP_003002917.1 251788196 8119839 complement(635619..636233) 1 NC_012912.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0717 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 636233 8119839 Dd1591_0556 Dickeya zeae Ech1591 lysine exporter protein LysE/YggA YP_003002917.1 635619 R 561229 CDS YP_003002918.1 251788197 8119840 636395..637177 1 NC_012912.1 PFAM: protein of unknown function DUF1212; KEGG: eca:ECA3866 hypothetical protein; hypothetical protein 637177 8119840 Dd1591_0557 Dickeya zeae Ech1591 hypothetical protein YP_003002918.1 636395 D 561229 CDS YP_003002919.1 251788198 8119841 637162..637632 1 NC_012912.1 KEGG: eca:ECA3865 hypothetical protein; hypothetical protein 637632 8119841 Dd1591_0558 Dickeya zeae Ech1591 hypothetical protein YP_003002919.1 637162 D 561229 CDS YP_003002920.1 251788199 8119842 637741..638223 1 NC_012912.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 638223 folA 8119842 folA Dickeya zeae Ech1591 dihydrofolate reductase YP_003002920.1 637741 D 561229 CDS YP_003002921.1 251788200 8119843 638399..640303 1 NC_012912.1 PFAM: protein of unknown function DUF839; KEGG: spe:Spro_0721 hypothetical protein; hypothetical protein 640303 8119843 Dd1591_0560 Dickeya zeae Ech1591 hypothetical protein YP_003002921.1 638399 D 561229 CDS YP_003002922.1 251788201 8119844 complement(640347..641192) 1 NC_012912.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 641192 apaH 8119844 apaH Dickeya zeae Ech1591 diadenosine tetraphosphatase YP_003002922.1 640347 R 561229 CDS YP_003002923.1 251788202 8119845 complement(641199..641576) 1 NC_012912.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 641576 apaG 8119845 apaG Dickeya zeae Ech1591 ApaG protein YP_003002923.1 641199 R 561229 CDS YP_003002924.1 251788203 8119846 complement(641592..642410) 1 NC_012912.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 642410 ksgA 8119846 ksgA Dickeya zeae Ech1591 dimethyladenosine transferase YP_003002924.1 641592 R 561229 CDS YP_003002925.1 251788204 8119847 complement(642403..643404) 1 NC_012912.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 643404 pdxA 8119847 pdxA Dickeya zeae Ech1591 4-hydroxythreonine-4-phosphate dehydrogenase YP_003002925.1 642403 R 561229 CDS YP_003002926.1 251788205 8119848 complement(643404..644696) 1 NC_012912.1 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA 644696 8119848 Dd1591_0565 Dickeya zeae Ech1591 peptidyl-prolyl cis-trans isomerase SurA YP_003002926.1 643404 R 561229 CDS YP_003002927.1 251788206 8119849 complement(644795..647218) 1 NC_012912.1 determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 647218 8119849 Dd1591_0566 Dickeya zeae Ech1591 organic solvent tolerance protein YP_003002927.1 644795 R 561229 CDS YP_003002928.1 251788207 8119850 647369..648325 1 NC_012912.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 648325 djlA 8119850 djlA Dickeya zeae Ech1591 Dna-J like membrane chaperone protein YP_003002928.1 647369 D 561229 CDS YP_003002929.1 251788208 8119851 complement(648463..649116) 1 NC_012912.1 PFAM: pseudouridine synthase; KEGG: eca:ECA3854 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase 649116 8119851 Dd1591_0568 Dickeya zeae Ech1591 pseudouridine synthase YP_003002929.1 648463 R 561229 CDS YP_003002930.1 251788209 8119852 complement(649181..652084) 1 NC_012912.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 652084 8119852 Dd1591_0569 Dickeya zeae Ech1591 ATP-dependent helicase HepA YP_003002930.1 649181 R 561229 CDS YP_003002931.1 251788210 8119853 complement(652343..654715) 1 NC_012912.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 654715 8119853 Dd1591_0570 Dickeya zeae Ech1591 DNA polymerase II YP_003002931.1 652343 R 561229 CDS YP_003002932.1 251788211 8119854 654937..655305 1 NC_012912.1 KEGG: eca:ECA4323 hypothetical protein; hypothetical protein 655305 8119854 Dd1591_0571 Dickeya zeae Ech1591 hypothetical protein YP_003002932.1 654937 D 561229 CDS YP_003002933.1 251788212 8119855 complement(655349..655906) 1 NC_012912.1 hypothetical protein 655906 8119855 Dd1591_0572 Dickeya zeae Ech1591 hypothetical protein YP_003002933.1 655349 R 561229 CDS YP_003002934.1 251788213 8119856 complement(655909..656475) 1 NC_012912.1 hypothetical protein 656475 8119856 Dd1591_0573 Dickeya zeae Ech1591 hypothetical protein YP_003002934.1 655909 R 561229 CDS YP_003002935.1 251788214 8119857 656620..657168 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA1069 hypothetical protein; Hcp1 family type VI secretion system effector 657168 8119857 Dd1591_0574 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003002935.1 656620 D 561229 CDS YP_003002936.1 251788215 8119858 complement(657235..657801) 1 NC_012912.1 hypothetical protein 657801 8119858 Dd1591_0575 Dickeya zeae Ech1591 hypothetical protein YP_003002936.1 657235 R 561229 CDS YP_003002937.1 251788216 8119859 complement(657798..658364) 1 NC_012912.1 hypothetical protein 658364 8119859 Dd1591_0576 Dickeya zeae Ech1591 hypothetical protein YP_003002937.1 657798 R 561229 CDS YP_003002938.1 251788217 8119860 complement(658361..658924) 1 NC_012912.1 hypothetical protein 658924 8119860 Dd1591_0577 Dickeya zeae Ech1591 hypothetical protein YP_003002938.1 658361 R 561229 CDS YP_003002939.1 251788218 8119861 complement(658934..659785) 1 NC_012912.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: eli:ELI_07940 putative bacteriophage-acquired protein; peptidoglycan-binding domain 1 protein 659785 8119861 Dd1591_0578 Dickeya zeae Ech1591 peptidoglycan-binding domain 1 protein YP_003002939.1 658934 R 561229 CDS YP_003002940.1 251788219 8119862 659976..660743 1 NC_012912.1 PFAM: SNARE associated Golgi protein; KEGG: eca:ECA3850 hypothetical protein; hypothetical protein 660743 8119862 Dd1591_0579 Dickeya zeae Ech1591 hypothetical protein YP_003002940.1 659976 D 561229 CDS YP_003002941.1 251788220 8119863 complement(660787..661080) 1 NC_012912.1 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit 661080 8119863 Dd1591_0580 Dickeya zeae Ech1591 acetolactate synthase 1 regulatory subunit YP_003002941.1 660787 R 561229 CDS YP_003002942.1 251788221 8119864 complement(661084..662748) 1 NC_012912.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: eca:ECA3848 acetolactate synthase catalytic subunit; acetolactate synthase catalytic subunit 662748 8119864 Dd1591_0581 Dickeya zeae Ech1591 acetolactate synthase catalytic subunit YP_003002942.1 661084 R 561229 CDS YP_003002943.1 251788222 8119865 complement(663118..663810) 1 NC_012912.1 with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit 663810 thiQ 8119865 thiQ Dickeya zeae Ech1591 thiamine transporter ATP-binding subunit YP_003002943.1 663118 R 561229 CDS YP_003002944.1 251788223 8119866 complement(663794..665407) 1 NC_012912.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 665407 thiP 8119866 thiP Dickeya zeae Ech1591 thiamine transporter membrane protein YP_003002944.1 663794 R 561229 CDS YP_003002945.1 251788224 8119867 complement(665383..666366) 1 NC_012912.1 part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 666366 tbpA 8119867 tbpA Dickeya zeae Ech1591 thiamine transporter substrate binding subunit YP_003002945.1 665383 R 561229 CDS YP_003002946.1 251788225 8119868 complement(666604..668271) 1 NC_012912.1 activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR 668271 8119868 Dd1591_0585 Dickeya zeae Ech1591 transcriptional regulator SgrR YP_003002946.1 666604 R 561229 CDS YP_003002947.1 251788226 8119869 668386..668544 1 NC_012912.1 hypothetical protein 668544 8119869 Dd1591_0586 Dickeya zeae Ech1591 hypothetical protein YP_003002947.1 668386 D 561229 CDS YP_003002948.1 251788227 8119870 complement(668675..670075) 1 NC_012912.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 670075 tnaA 8119870 tnaA Dickeya zeae Ech1591 tryptophanase YP_003002948.1 668675 R 561229 CDS YP_003002949.1 251788228 8119871 complement(670176..670286) 1 NC_012912.1 TIGRFAM: tryptophanase leader peptide; tryptophanase leader peptide 670286 8119871 Dd1591_0588 Dickeya zeae Ech1591 tryptophanase leader peptide YP_003002949.1 670176 R 561229 CDS YP_003002950.1 251788229 8119872 670534..671436 1 NC_012912.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: cko:CKO_00978 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein 671436 8119872 Dd1591_0589 Dickeya zeae Ech1591 FAD-binding 9 siderophore-interacting domain-containing protein YP_003002950.1 670534 D 561229 CDS YP_003002951.1 251788230 8119873 complement(671793..672782) 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 672782 8119873 Dd1591_0590 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003002951.1 671793 R 561229 CDS YP_003002952.1 251788231 8119874 complement(673170..673772) 1 NC_012912.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 673772 leuD 8119874 leuD Dickeya zeae Ech1591 isopropylmalate isomerase small subunit YP_003002952.1 673170 R 561229 CDS YP_003002953.1 251788232 8119875 complement(673785..675185) 1 NC_012912.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: yps:YPTB0670 isopropylmalate isomerase large subunit; 3-isopropylmalate dehydratase, large subunit 675185 8119875 Dd1591_0592 Dickeya zeae Ech1591 3-isopropylmalate dehydratase, large subunit YP_003002953.1 673785 R 561229 CDS YP_003002954.1 251788233 8119876 complement(675188..676279) 1 NC_012912.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 676279 8119876 Dd1591_0593 Dickeya zeae Ech1591 3-isopropylmalate dehydrogenase YP_003002954.1 675188 R 561229 CDS YP_003002955.1 251788234 8119877 complement(676279..677853) 1 NC_012912.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 677853 8119877 Dd1591_0594 Dickeya zeae Ech1591 2-isopropylmalate synthase YP_003002955.1 676279 R 561229 CDS YP_003002956.1 251788235 8119878 678260..680065 1 NC_012912.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA3830 putative AMP-binding protein; AMP-dependent synthetase and ligase 680065 8119878 Dd1591_0595 Dickeya zeae Ech1591 AMP-dependent synthetase and ligase YP_003002956.1 678260 D 561229 CDS YP_003002957.1 251788236 8119879 680463..682184 1 NC_012912.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 682184 8119879 Dd1591_0596 Dickeya zeae Ech1591 acetolactate synthase 3 catalytic subunit YP_003002957.1 680463 D 561229 CDS YP_003002958.1 251788237 8119880 682187..682678 1 NC_012912.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 682678 ilvH 8119880 ilvH Dickeya zeae Ech1591 acetolactate synthase 3 regulatory subunit YP_003002958.1 682187 D 561229 CDS YP_003002959.1 251788238 8119881 682922..683926 1 NC_012912.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 683926 8119881 Dd1591_0598 Dickeya zeae Ech1591 DNA-binding transcriptional regulator FruR YP_003002959.1 682922 D 561229 CDS YP_003002960.1 251788239 8119882 complement(684042..684503) 1 NC_012912.1 PFAM: protein of unknown function DUF1144; KEGG: eca:ECA3826 hypothetical protein; hypothetical protein 684503 8119882 Dd1591_0599 Dickeya zeae Ech1591 hypothetical protein YP_003002960.1 684042 R 561229 CDS YP_003002961.1 251788240 8119883 complement(684945..685160) 1 NC_012912.1 hypothetical protein 685160 8119883 Dd1591_0600 Dickeya zeae Ech1591 hypothetical protein YP_003002961.1 684945 R 561229 CDS YP_003002962.1 251788241 8119884 685371..685829 1 NC_012912.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 685829 8119884 Dd1591_0601 Dickeya zeae Ech1591 cell division protein MraZ YP_003002962.1 685371 D 561229 CDS YP_003002963.1 251788242 8119885 685832..686773 1 NC_012912.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: eca:ECA3823 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 686773 mraW 8119885 mraW Dickeya zeae Ech1591 S-adenosyl-methyltransferase MraW YP_003002963.1 685832 D 561229 CDS YP_003002964.1 251788243 8119886 686770..687093 1 NC_012912.1 membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 687093 8119886 Dd1591_0603 Dickeya zeae Ech1591 cell division protein FtsL YP_003002964.1 686770 D 561229 CDS YP_003002965.1 251788244 8119887 687116..688879 1 NC_012912.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: eca:ECA3821 peptidoglycan synthetase; peptidoglycan glycosyltransferase 688879 8119887 Dd1591_0604 Dickeya zeae Ech1591 peptidoglycan glycosyltransferase YP_003002965.1 687116 D 561229 CDS YP_003002966.1 251788245 8119888 688866..690350 1 NC_012912.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 690350 murE 8119888 murE Dickeya zeae Ech1591 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_003002966.1 688866 D 561229 CDS YP_003002967.1 251788246 8119889 690347..691708 1 NC_012912.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: eca:ECA3819 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 691708 murF 8119889 murF Dickeya zeae Ech1591 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_003002967.1 690347 D 561229 CDS YP_003002968.1 251788247 8119890 691702..692784 1 NC_012912.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 692784 mraY 8119890 mraY Dickeya zeae Ech1591 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003002968.1 691702 D 561229 CDS YP_003002969.1 251788248 8119891 692787..694100 1 NC_012912.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 694100 murD 8119891 murD Dickeya zeae Ech1591 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_003002969.1 692787 D 561229 CDS YP_003002970.1 251788249 8119892 694100..695302 1 NC_012912.1 integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 695302 8119892 Dd1591_0609 Dickeya zeae Ech1591 cell division protein FtsW YP_003002970.1 694100 D 561229 CDS YP_003002971.1 251788250 8119893 695299..696390 1 NC_012912.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 696390 murG 8119893 murG Dickeya zeae Ech1591 UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase YP_003002971.1 695299 D 561229 CDS YP_003002972.1 251788251 8119894 696442..697902 1 NC_012912.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 697902 murC 8119894 murC Dickeya zeae Ech1591 UDP-N-acetylmuramate--L-alanine ligase YP_003002972.1 696442 D 561229 CDS YP_003002973.1 251788252 8119895 697910..698062 1 NC_012912.1 hypothetical protein 698062 8119895 Dd1591_0612 Dickeya zeae Ech1591 hypothetical protein YP_003002973.1 697910 D 561229 CDS YP_003002974.1 251788253 8119896 698064..698918 1 NC_012912.1 involved in septum formation; cell division protein FtsQ 698918 8119896 Dd1591_0613 Dickeya zeae Ech1591 cell division protein FtsQ YP_003002974.1 698064 D 561229 CDS YP_003002975.1 251788254 8119897 698915..700171 1 NC_012912.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 700171 ftsA 8119897 ftsA Dickeya zeae Ech1591 cell division protein FtsA YP_003002975.1 698915 D 561229 CDS YP_003002976.1 251788255 8119898 700245..701396 1 NC_012912.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 701396 8119898 Dd1591_0615 Dickeya zeae Ech1591 cell division protein FtsZ YP_003002976.1 700245 D 561229 CDS YP_003002977.1 251788256 8119899 701492..702409 1 NC_012912.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 702409 lpxC 8119899 lpxC Dickeya zeae Ech1591 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_003002977.1 701492 D 561229 CDS YP_003002978.1 251788257 8119900 complement(702428..702952) 1 NC_012912.1 PFAM: protein of unknown function DUF721; KEGG: eca:ECA3808 hypothetical protein; hypothetical protein 702952 8119900 Dd1591_0617 Dickeya zeae Ech1591 hypothetical protein YP_003002978.1 702428 R 561229 CDS YP_003002979.1 251788258 8119661 702980..703483 1 NC_012912.1 secM translational pause allows for the initiation of secA translation; SecA regulator SecM 703483 8119661 Dd1591_0618 Dickeya zeae Ech1591 SecA regulator SecM YP_003002979.1 702980 D 561229 CDS YP_003002980.1 251788259 8119662 703581..706274 1 NC_012912.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 706274 8119662 Dd1591_0619 Dickeya zeae Ech1591 preprotein translocase subunit SecA YP_003002980.1 703581 D 561229 CDS YP_003002981.1 251788260 8119663 706344..706742 1 NC_012912.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: eca:ECA3805 nucleoside triphosphate pyrophosphohydrolase; nucleoside triphosphate pyrophosphohydrolase 706742 8119663 Dd1591_0620 Dickeya zeae Ech1591 nucleoside triphosphate pyrophosphohydrolase YP_003002981.1 706344 D 561229 CDS YP_003002982.1 251788261 8119664 complement(706841..707062) 1 NC_012912.1 PFAM: protein of unknown function DUF329; KEGG: spe:Spro_0772 hypothetical protein; hypothetical protein 707062 8119664 Dd1591_0621 Dickeya zeae Ech1591 hypothetical protein YP_003002982.1 706841 R 561229 CDS YP_003002983.1 251788262 8119665 complement(707071..707820) 1 NC_012912.1 PFAM: protein of unknown function DUF1342; KEGG: eca:ECA3803 hypothetical protein; hypothetical protein 707820 8119665 Dd1591_0622 Dickeya zeae Ech1591 hypothetical protein YP_003002983.1 707071 R 561229 CDS YP_003002984.1 251788263 8119666 complement(707813..708439) 1 NC_012912.1 KEGG: eca:ECA3802 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 708439 8119666 Dd1591_0623 Dickeya zeae Ech1591 dephospho-CoA kinase YP_003002984.1 707813 R 561229 CDS YP_003002985.1 251788264 8119667 708605..709645 1 NC_012912.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 709645 8119667 Dd1591_0624 Dickeya zeae Ech1591 guanosine 5'-monophosphate oxidoreductase YP_003002985.1 708605 D 561229 CDS YP_003002986.1 251788265 8119668 complement(709671..710876) 1 NC_012912.1 PFAM: type II secretion system protein; KEGG: eca:ECA3800 type IV pilin biogenesis protein; type IV pilin biogenesis protein 710876 8119668 Dd1591_0625 Dickeya zeae Ech1591 type IV pilin biogenesis protein YP_003002986.1 709671 R 561229 CDS YP_003002987.1 251788266 8119669 complement(710885..712306) 1 NC_012912.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: eca:ECA3799 hypothetical protein; hypothetical protein 712306 8119669 Dd1591_0626 Dickeya zeae Ech1591 hypothetical protein YP_003002987.1 710885 R 561229 CDS YP_003002988.1 251788267 8119670 complement(712312..712755) 1 NC_012912.1 KEGG: eca:ECA3798 putative major pilin subunit; putative major pilin subunit 712755 8119670 Dd1591_0627 Dickeya zeae Ech1591 putative major pilin subunit YP_003002988.1 712312 R 561229 CDS YP_003002989.1 251788268 8119671 complement(713019..713909) 1 NC_012912.1 KEGG: eca:ECA3797 quinolinate phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 713909 8119671 Dd1591_0628 Dickeya zeae Ech1591 nicotinate-nucleotide pyrophosphorylase YP_003002989.1 713019 R 561229 CDS YP_003002990.1 251788269 8119672 complement(714184..715047) 1 NC_012912.1 PFAM: nucleoside-specific channel-forming protein Tsx; KEGG: eca:ECA3796 nucleoside-specific channel-forming protein; nucleoside-specific channel-forming protein Tsx 715047 8119672 Dd1591_0629 Dickeya zeae Ech1591 nucleoside-specific channel-forming protein Tsx YP_003002990.1 714184 R 561229 CDS YP_003002991.1 251788270 8119673 715451..716011 1 NC_012912.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: eca:ECA3795 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase 716011 8119673 Dd1591_0630 Dickeya zeae Ech1591 N-acetyl-anhydromuranmyl-L-alanine amidase YP_003002991.1 715451 D 561229 CDS YP_003002992.1 251788271 8119674 716018..716872 1 NC_012912.1 involved in regulation of beta-lactamase; putative signaling protein; regulatory protein AmpE 716872 8119674 Dd1591_0631 Dickeya zeae Ech1591 regulatory protein AmpE YP_003002992.1 716018 D 561229 CDS YP_003002993.1 251788272 8119675 complement(716921..718267) 1 NC_012912.1 PFAM: amino acid permease-associated region; KEGG: eca:ECA3791 aromatic amino acid transport protein; amino acid permease-like protein 718267 8119675 Dd1591_0632 Dickeya zeae Ech1591 amino acid permease-like protein YP_003002993.1 716921 R 561229 CDS YP_003002994.1 251788273 8119676 718916..719680 1 NC_012912.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 719680 pdhR 8119676 pdhR Dickeya zeae Ech1591 transcriptional regulator PdhR YP_003002994.1 718916 D 561229 CDS YP_003002995.1 251788274 8119677 719813..722476 1 NC_012912.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 722476 aceE 8119677 aceE Dickeya zeae Ech1591 pyruvate dehydrogenase subunit E1 YP_003002995.1 719813 D 561229 CDS YP_003002996.1 251788275 8119678 722490..724370 1 NC_012912.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase 724370 aceF 8119678 aceF Dickeya zeae Ech1591 dihydrolipoamide acetyltransferase YP_003002996.1 722490 D 561229 CDS YP_003002997.1 251788276 8119679 724585..726009 1 NC_012912.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: esa:ESA_03220 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 726009 8119679 Dd1591_0636 Dickeya zeae Ech1591 dihydrolipoamide dehydrogenase YP_003002997.1 724585 D 561229 CDS YP_003002998.1 251788277 8119680 726198..727376 1 NC_012912.1 PFAM: dienelactone hydrolase; KEGG: eca:ECA3785 hypothetical protein; dienelactone hydrolase 727376 8119680 Dd1591_0637 Dickeya zeae Ech1591 dienelactone hydrolase YP_003002998.1 726198 D 561229 CDS YP_003002999.1 251788278 8119681 complement(727438..728769) 1 NC_012912.1 PFAM: MmgE/PrpD family protein; KEGG: eca:ECA3784 hypothetical protein; MmgE/PrpD family protein 728769 8119681 Dd1591_0638 Dickeya zeae Ech1591 MmgE/PrpD family protein YP_003002999.1 727438 R 561229 CDS YP_003003000.1 251788279 8119682 729213..731810 1 NC_012912.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 731810 8119682 Dd1591_0639 Dickeya zeae Ech1591 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_003003000.1 729213 D 561229 CDS YP_003003001.1 251788280 8119683 731928..732290 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA3777 hypothetical protein; hypothetical protein 732290 8119683 Dd1591_0640 Dickeya zeae Ech1591 hypothetical protein YP_003003001.1 731928 D 561229 CDS YP_003003002.1 251788281 8119684 732511..734124 1 NC_012912.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: dia:Dtpsy_2395 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 734124 8119684 Dd1591_0641 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003002.1 732511 D 561229 CDS YP_003003003.1 251788282 8119685 complement(734147..734830) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA3767 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 734830 8119685 Dd1591_0642 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003003003.1 734147 R 561229 CDS YP_003003004.1 251788283 8119686 complement(734836..735309) 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA3766 hypothetical protein; hypothetical protein 735309 8119686 Dd1591_0643 Dickeya zeae Ech1591 hypothetical protein YP_003003004.1 734836 R 561229 CDS YP_003003005.1 251788284 8119687 complement(735477..736652) 1 NC_012912.1 KEGG: eca:ECA3765 hypothetical protein; hypothetical protein 736652 8119687 Dd1591_0644 Dickeya zeae Ech1591 hypothetical protein YP_003003005.1 735477 R 561229 CDS YP_003003006.1 251788285 8119688 complement(736659..738077) 1 NC_012912.1 PFAM: Na+/solute symporter; KEGG: eca:ECA3764 sodium:solute symporter; Na+/solute symporter 738077 8119688 Dd1591_0645 Dickeya zeae Ech1591 Na+/solute symporter YP_003003006.1 736659 R 561229 CDS YP_003003007.1 251788286 8119689 complement(738115..738999) 1 NC_012912.1 PFAM: dihydrodipicolinate synthetase; KEGG: eca:ECA3763 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase 738999 8119689 Dd1591_0646 Dickeya zeae Ech1591 dihydrodipicolinate synthetase YP_003003007.1 738115 R 561229 CDS YP_003003008.1 251788287 8119690 complement(739082..740218) 1 NC_012912.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: eca:ECA3762 putative alcohol dehydrogenase; iron-containing alcohol dehydrogenase 740218 8119690 Dd1591_0647 Dickeya zeae Ech1591 iron-containing alcohol dehydrogenase YP_003003008.1 739082 R 561229 CDS YP_003003009.1 251788288 8119691 740435..741721 1 NC_012912.1 PFAM: type III effector Hrp-dependent outers; KEGG: eca:ECA3761 hypothetical protein; Hrp-dependent type III effector protein 741721 8119691 Dd1591_0648 Dickeya zeae Ech1591 Hrp-dependent type III effector protein YP_003003009.1 740435 D 561229 CDS YP_003003010.1 251788289 8119692 741714..742694 1 NC_012912.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 2 742694 pdxA 8119692 pdxA Dickeya zeae Ech1591 4-hydroxythreonine-4-phosphate dehydrogenase 2 YP_003003010.1 741714 D 561229 CDS YP_003003011.1 251788290 8119693 742719..743549 1 NC_012912.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eca:ECA3759 DeoR family transcriptional regulator; DeoR family transcriptional regulator 743549 8119693 Dd1591_0650 Dickeya zeae Ech1591 DeoR family transcriptional regulator YP_003003011.1 742719 D 561229 CDS YP_003003012.1 251788291 8119694 complement(743824..744024) 1 NC_012912.1 hypothetical protein 744024 8119694 Dd1591_0651 Dickeya zeae Ech1591 hypothetical protein YP_003003012.1 743824 R 561229 CDS YP_003003013.1 251788292 8119695 complement(744021..745538) 1 NC_012912.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: bha:BH3836 4-hydroxyphenylacetate-3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase 745538 8119695 Dd1591_0652 Dickeya zeae Ech1591 4-hydroxyphenylacetate 3-hydroxylase YP_003003013.1 744021 R 561229 CDS YP_003003014.1 251788293 8119696 complement(745902..746780) 1 NC_012912.1 PFAM: periplasmic solute binding protein; KEGG: ecp:ECP_3824 putative periplasmic binding protein; periplasmic solute binding protein 746780 8119696 Dd1591_0653 Dickeya zeae Ech1591 periplasmic solute binding protein YP_003003014.1 745902 R 561229 CDS YP_003003015.1 251788294 8119697 complement(746822..747676) 1 NC_012912.1 PFAM: ABC-3 protein; KEGG: ecp:ECP_3823 putative ABC-transporter membrane protein; ABC transporter 747676 8119697 Dd1591_0654 Dickeya zeae Ech1591 ABC transporter YP_003003015.1 746822 R 561229 CDS YP_003003016.1 251788295 8119698 complement(747673..748392) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ecp:ECP_3822 putative ABC-transporter ATP-binding protein; ABC transporter 748392 8119698 Dd1591_0655 Dickeya zeae Ech1591 ABC transporter YP_003003016.1 747673 R 561229 CDS YP_003003017.1 251788296 8119699 complement(748389..748493) 1 NC_012912.1 hypothetical protein 748493 8119699 Dd1591_0656 Dickeya zeae Ech1591 hypothetical protein YP_003003017.1 748389 R 561229 CDS YP_003003018.1 251788297 8119700 complement(748737..749648) 1 NC_012912.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: eca:ECA3753 hypothetical protein; ATPase BadF/BadG/BcrA/BcrD type 749648 8119700 Dd1591_0657 Dickeya zeae Ech1591 ATPase BadF/BadG/BcrA/BcrD type YP_003003018.1 748737 R 561229 CDS YP_003003019.1 251788298 8119702 complement(750236..751543) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3751 extracellular solute-binding protein; extracellular solute-binding protein family 1 751543 8119702 Dd1591_0659 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003003019.1 750236 R 561229 CDS YP_003003020.1 251788299 8119703 752381..754861 1 NC_012912.1 KEGG: eca:ECA3750 hypothetical protein; hypothetical protein 754861 8119703 Dd1591_0660 Dickeya zeae Ech1591 hypothetical protein YP_003003020.1 752381 D 561229 CDS YP_003003021.1 251788300 8119704 754863..755972 1 NC_012912.1 PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3749 plant-inducible protein; glycosyl hydrolase family 88 755972 8119704 Dd1591_0661 Dickeya zeae Ech1591 glycosyl hydrolase family 88 YP_003003021.1 754863 D 561229 CDS YP_003003022.1 251788301 8119705 756020..757120 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA3748 ABC transporter, ATP-binding protein; ABC transporter 757120 8119705 Dd1591_0662 Dickeya zeae Ech1591 ABC transporter YP_003003022.1 756020 D 561229 CDS YP_003003023.1 251788302 8119706 757234..758235 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3747 ABC transporter, membrane spanning protein; binding-protein-dependent transport systems inner membrane component 758235 8119706 Dd1591_0663 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003023.1 757234 D 561229 CDS YP_003003024.1 251788303 8119707 758248..759300 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3746 ABC transporter, membrane spanning protein; binding-protein-dependent transport systems inner membrane component 759300 8119707 Dd1591_0664 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003024.1 758248 D 561229 CDS YP_003003025.1 251788304 8119708 759301..760332 1 NC_012912.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA3745 LacI family transcriptional regulator; LacI family transcriptional regulator 760332 8119708 Dd1591_0665 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003003025.1 759301 D 561229 CDS YP_003003026.1 251788305 8119709 760512..761513 1 NC_012912.1 KEGG: mgm:Mmc1_0568 DNA replication and repair protein RecF; DNA replication and repair protein RecF 761513 8119709 Dd1591_0666 Dickeya zeae Ech1591 DNA replication and repair protein RecF YP_003003026.1 760512 D 561229 CDS YP_003003027.1 251788306 8119710 761596..762633 1 NC_012912.1 KEGG: stm:PSLT042 putative integrase protein; putative integrase protein 762633 8119710 Dd1591_0667 Dickeya zeae Ech1591 putative integrase protein YP_003003027.1 761596 D 561229 CDS YP_003003028.1 251788307 8119711 762661..763209 1 NC_012912.1 KEGG: mgm:Mmc1_0567 hypothetical protein; hypothetical protein 763209 8119711 Dd1591_0668 Dickeya zeae Ech1591 hypothetical protein YP_003003028.1 762661 D 561229 CDS YP_003003029.1 251788308 8119712 complement(763373..765481) 1 NC_012912.1 KEGG: sdn:Sden_2995 hypothetical protein; hypothetical protein 765481 8119712 Dd1591_0669 Dickeya zeae Ech1591 hypothetical protein YP_003003029.1 763373 R 561229 CDS YP_003003030.1 251788309 8119713 complement(765534..769280) 1 NC_012912.1 KEGG: ppd:Ppro_0363 hypothetical protein; hypothetical protein 769280 8119713 Dd1591_0670 Dickeya zeae Ech1591 hypothetical protein YP_003003030.1 765534 R 561229 CDS YP_003003031.1 251788310 8119714 complement(769277..771772) 1 NC_012912.1 KEGG: sdn:Sden_2998 hypothetical protein; hypothetical protein 771772 8119714 Dd1591_0671 Dickeya zeae Ech1591 hypothetical protein YP_003003031.1 769277 R 561229 CDS YP_003003032.1 251788311 8119715 complement(771775..772602) 1 NC_012912.1 KEGG: sdn:Sden_2999 hypothetical protein; hypothetical protein 772602 8119715 Dd1591_0672 Dickeya zeae Ech1591 hypothetical protein YP_003003032.1 771775 R 561229 CDS YP_003003033.1 251788312 8119716 complement(772664..776740) 1 NC_012912.1 KEGG: sdn:Sden_3000 hypothetical protein; hypothetical protein 776740 8119716 Dd1591_0673 Dickeya zeae Ech1591 hypothetical protein YP_003003033.1 772664 R 561229 CDS YP_003003034.1 251788313 8119717 complement(776800..777219) 1 NC_012912.1 PFAM: GPW/gp25 family protein; KEGG: sdn:Sden_3001 gpW/GP25; GPW/gp25 family protein 777219 8119717 Dd1591_0674 Dickeya zeae Ech1591 GPW/gp25 family protein YP_003003034.1 776800 R 561229 CDS YP_003003035.1 251788314 8119718 complement(777222..777521) 1 NC_012912.1 PFAM: PAAR repeat-containing protein; KEGG: sdn:Sden_3002 PaaR; PAAR repeat-containing protein 777521 8119718 Dd1591_0675 Dickeya zeae Ech1591 PAAR repeat-containing protein YP_003003035.1 777222 R 561229 CDS YP_003003036.1 251788315 8119719 complement(777592..779382) 1 NC_012912.1 TIGRFAM: Rhs element Vgr protein; KEGG: sdn:Sden_3003 rhs element Vgr protein; Rhs element Vgr protein 779382 8119719 Dd1591_0676 Dickeya zeae Ech1591 Rhs element Vgr protein YP_003003036.1 777592 R 561229 CDS YP_003003037.1 251788316 8119720 complement(779395..780042) 1 NC_012912.1 PFAM: Peptidoglycan-binding LysM; KEGG: sdn:Sden_3004 hypothetical protein; peptidoglycan-binding LysM 780042 8119720 Dd1591_0677 Dickeya zeae Ech1591 peptidoglycan-binding LysM YP_003003037.1 779395 R 561229 CDS YP_003003038.1 251788317 8119721 complement(780058..780237) 1 NC_012912.1 hypothetical protein 780237 8119721 Dd1591_0678 Dickeya zeae Ech1591 hypothetical protein YP_003003038.1 780058 R 561229 CDS YP_003003039.1 251788318 8119722 complement(780265..780723) 1 NC_012912.1 TIGRFAM: conserved hypothetical protein; KEGG: sdn:Sden_3005 hypothetical protein; hypothetical protein 780723 8119722 Dd1591_0679 Dickeya zeae Ech1591 hypothetical protein YP_003003039.1 780265 R 561229 CDS YP_003003040.1 251788319 8119723 complement(780830..781300) 1 NC_012912.1 TIGRFAM: conserved hypothetical protein; KEGG: sdn:Sden_3006 hypothetical protein; hypothetical protein 781300 8119723 Dd1591_0680 Dickeya zeae Ech1591 hypothetical protein YP_003003040.1 780830 R 561229 CDS YP_003003041.1 251788320 8119724 complement(781396..782949) 1 NC_012912.1 KEGG: sdn:Sden_3007 hypothetical protein; hypothetical protein 782949 8119724 Dd1591_0681 Dickeya zeae Ech1591 hypothetical protein YP_003003041.1 781396 R 561229 CDS YP_003003042.1 251788321 8119725 complement(783061..783873) 1 NC_012912.1 KEGG: ppd:Ppro_0374 hypothetical protein; hypothetical protein 783873 8119725 Dd1591_0682 Dickeya zeae Ech1591 hypothetical protein YP_003003042.1 783061 R 561229 CDS YP_003003043.1 251788322 8119726 complement(783879..784451) 1 NC_012912.1 KEGG: cja:CJA_3668 hypothetical protein; hypothetical protein 784451 8119726 Dd1591_0683 Dickeya zeae Ech1591 hypothetical protein YP_003003043.1 783879 R 561229 CDS YP_003003044.1 251788323 8119727 784666..785157 1 NC_012912.1 KEGG: yps:YPTB2203 hypothetical protein; hypothetical protein 785157 8119727 Dd1591_0684 Dickeya zeae Ech1591 hypothetical protein YP_003003044.1 784666 D 561229 CDS YP_003003045.1 251788324 8119728 complement(785296..785883) 1 NC_012912.1 KEGG: efe:EFER_2439 hypothetical protein; hypothetical protein 785883 8119728 Dd1591_0685 Dickeya zeae Ech1591 hypothetical protein YP_003003045.1 785296 R 561229 CDS YP_003003046.1 251788325 8119729 786058..786687 1 NC_012912.1 KEGG: dac:Daci_3890 hypothetical protein; hypothetical protein 786687 8119729 Dd1591_0686 Dickeya zeae Ech1591 hypothetical protein YP_003003046.1 786058 D 561229 CDS YP_003003047.1 251788326 8119730 786722..787300 1 NC_012912.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pmy:Pmen_4577 flavin reductase domain-containing protein; flavin reductase domain-containing protein FMN-binding 787300 8119730 Dd1591_0687 Dickeya zeae Ech1591 flavin reductase domain-containing protein FMN-binding YP_003003047.1 786722 D 561229 CDS YP_003003048.1 251788327 8119731 complement(787361..788050) 1 NC_012912.1 KEGG: GH16670 gene product from transcript GH16670-RA; hypothetical protein 788050 8119731 Dd1591_0688 Dickeya zeae Ech1591 hypothetical protein YP_003003048.1 787361 R 561229 CDS YP_003003049.1 251788328 8119732 complement(788107..788319) 1 NC_012912.1 hypothetical protein 788319 8119732 Dd1591_0689 Dickeya zeae Ech1591 hypothetical protein YP_003003049.1 788107 R 561229 CDS YP_003003050.1 251788329 8119733 complement(788504..790384) 1 NC_012912.1 KEGG: bpt:Bpet4285 mobile mitochondrial group II intron of COX1 which IS involved in pre-mRNA splicing and in deletion of introns from mitochondrial DNA; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); intron maturase type II; SMART: HNH nuclease; RNA-directed DNA polymerase 790384 8119733 Dd1591_0690 Dickeya zeae Ech1591 RNA-directed DNA polymerase YP_003003050.1 788504 R 561229 CDS YP_003003051.1 251788330 8119734 complement(790998..791546) 1 NC_012912.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: efe:EFER_4161 single-stranded DNA-binding protein; single-strand binding protein 791546 8119734 Dd1591_0691 Dickeya zeae Ech1591 single-strand binding protein YP_003003051.1 790998 R 561229 CDS YP_003003052.1 251788331 8119735 791789..794620 1 NC_012912.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 794620 uvrA 8119735 uvrA Dickeya zeae Ech1591 excinuclease ABC subunit A YP_003003052.1 791789 D 561229 CDS YP_003003053.1 251788332 8119736 794703..795122 1 NC_012912.1 PFAM: protein of unknown function UPF0047; KEGG: eca:ECA3688 hypothetical protein; hypothetical protein 795122 8119736 Dd1591_0693 Dickeya zeae Ech1591 hypothetical protein YP_003003053.1 794703 D 561229 CDS YP_003003054.1 251788333 8119737 complement(795167..796777) 1 NC_012912.1 KEGG: eca:ECA3374 putative signaling membrane protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 796777 8119737 Dd1591_0694 Dickeya zeae Ech1591 diguanylate cyclase YP_003003054.1 795167 R 561229 CDS YP_003003055.1 251788334 8119738 797748..799433 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0183 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 799433 8119738 Dd1591_0695 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003055.1 797748 D 561229 CDS YP_003003056.1 251788335 8119739 801338..802339 1 NC_012912.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: eca:ECA3679 hypothetical protein; CRISPR-associated protein Cas1 802339 8119739 Dd1591_0696 Dickeya zeae Ech1591 CRISPR-associated protein Cas1 YP_003003056.1 801338 D 561229 CDS YP_003003057.1 251788336 8119740 802336..805617 1 NC_012912.1 TIGRFAM: CRISPR-associated helicase Cas3 family; KEGG: eca:ECA3680 hypothetical protein; Cas3 family CRISPR-associated helicase 805617 8119740 Dd1591_0697 Dickeya zeae Ech1591 Cas3 family CRISPR-associated helicase YP_003003057.1 802336 D 561229 CDS YP_003003058.1 251788337 8119421 806344..807681 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Csy1 family; KEGG: eca:ECA3681 hypothetical protein; Csy1 family CRISPR-associated protein 807681 8119421 Dd1591_0698 Dickeya zeae Ech1591 Csy1 family CRISPR-associated protein YP_003003058.1 806344 D 561229 CDS YP_003003059.1 251788338 8119422 807678..808619 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Csy2 family; KEGG: eca:ECA3682 hypothetical protein; Csy2 family CRISPR-associated protein 808619 8119422 Dd1591_0699 Dickeya zeae Ech1591 Csy2 family CRISPR-associated protein YP_003003059.1 807678 D 561229 CDS YP_003003060.1 251788339 8119423 808636..809643 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Csy3 family; KEGG: eca:ECA3683 hypothetical protein; Csy3 family CRISPR-associated protein 809643 8119423 Dd1591_0700 Dickeya zeae Ech1591 Csy3 family CRISPR-associated protein YP_003003060.1 808636 D 561229 CDS YP_003003061.1 251788340 8119424 809648..810202 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Csy4 family; KEGG: eca:ECA3684 hypothetical protein; Csy4 family CRISPR-associated protein 810202 8119424 Dd1591_0701 Dickeya zeae Ech1591 Csy4 family CRISPR-associated protein YP_003003061.1 809648 D 561229 CDS YP_003003062.1 251788341 8119425 complement(813343..814536) 1 NC_012912.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 814536 8119425 Dd1591_0702 Dickeya zeae Ech1591 aromatic amino acid aminotransferase YP_003003062.1 813343 R 561229 CDS YP_003003063.1 251788342 8119426 complement(814577..815191) 1 NC_012912.1 PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein; hypothetical protein 815191 8119426 Dd1591_0703 Dickeya zeae Ech1591 hypothetical protein YP_003003063.1 814577 R 561229 CDS YP_003003064.1 251788343 8119427 complement(815442..815918) 1 NC_012912.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA3668 transcription regulator AsnC; AsnC family transcriptional regulator 815918 8119427 Dd1591_0704 Dickeya zeae Ech1591 AsnC family transcriptional regulator YP_003003064.1 815442 R 561229 CDS YP_003003065.1 251788344 8119428 816292..817665 1 NC_012912.1 PFAM: amino acid permease-associated region; KEGG: kpe:KPK_3038 putative aromatic amino acid transport protein AroP; amino acid permease-like protein 817665 8119428 Dd1591_0705 Dickeya zeae Ech1591 amino acid permease-like protein YP_003003065.1 816292 D 561229 CDS YP_003003066.1 251788345 8119429 819371..820138 1 NC_012912.1 KEGG: spe:Spro_4447 arogenate dehydratase; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; Prephenate dehydratase 820138 8119429 Dd1591_0706 Dickeya zeae Ech1591 Prephenate dehydratase YP_003003066.1 819371 D 561229 CDS YP_003003067.1 251788346 8119430 820382..820630 1 NC_012912.1 PFAM: protein of unknown function DUF1471; KEGG: plu:plu4502 hypothetical protein; hypothetical protein 820630 8119430 Dd1591_0707 Dickeya zeae Ech1591 hypothetical protein YP_003003067.1 820382 D 561229 CDS YP_003003068.1 251788347 8119431 complement(820789..821865) 1 NC_012912.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 821865 alr 8119431 alr Dickeya zeae Ech1591 alanine racemase YP_003003068.1 820789 R 561229 CDS YP_003003069.1 251788348 8119432 complement(821956..823359) 1 NC_012912.1 KEGG: eca:ECA3664 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 823359 8119432 Dd1591_0709 Dickeya zeae Ech1591 replicative DNA helicase YP_003003069.1 821956 R 561229 CDS YP_003003070.1 251788349 8119433 823482..824477 1 NC_012912.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA3663 quinone oxidoreductase, NADPH-dependent; quinone oxidoreductase, NADPH-dependent 824477 8119433 Dd1591_0710 Dickeya zeae Ech1591 quinone oxidoreductase, NADPH-dependent YP_003003070.1 823482 D 561229 CDS YP_003003071.1 251788350 8119434 825030..826409 1 NC_012912.1 PFAM: cytochrome P450; KEGG: eca:ECA3662 putative cytochrome; cytochrome P450 826409 8119434 Dd1591_0711 Dickeya zeae Ech1591 cytochrome P450 YP_003003071.1 825030 D 561229 CDS YP_003003072.1 251788351 8119435 complement(827031..827306) 1 NC_012912.1 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 827306 pspG 8119435 pspG Dickeya zeae Ech1591 phage shock protein G YP_003003072.1 827031 R 561229 CDS YP_003003073.1 251788352 8119436 complement(827497..828531) 1 NC_012912.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: eca:ECA3660 tRNA-dihydrouridine synthase A; TIM-barrel protein, yjbN family 828531 8119436 Dd1591_0713 Dickeya zeae Ech1591 TIM-barrel protein, yjbN family YP_003003073.1 827497 R 561229 CDS YP_003003074.1 251788353 8119437 828959..829531 1 NC_012912.1 KEGG: cja:CJA_3633 hypothetical protein; hypothetical protein 829531 8119437 Dd1591_0714 Dickeya zeae Ech1591 hypothetical protein YP_003003074.1 828959 D 561229 CDS YP_003003075.1 251788354 8119439 complement(829960..830844) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_3090 transcriptional regulator, LysR family; LysR family transcriptional regulator 830844 8119439 Dd1591_0716 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003075.1 829960 R 561229 CDS YP_003003076.1 251788355 8119440 831056..832192 1 NC_012912.1 KEGG: ent:Ent638_2117 hypothetical protein; hypothetical protein 832192 8119440 Dd1591_0717 Dickeya zeae Ech1591 hypothetical protein YP_003003076.1 831056 D 561229 CDS YP_003003077.1 251788356 8119441 832289..832798 1 NC_012912.1 KEGG: ank:AnaeK_3353 hypothetical protein; hypothetical protein 832798 8119441 Dd1591_0718 Dickeya zeae Ech1591 hypothetical protein YP_003003077.1 832289 D 561229 CDS YP_003003078.1 251788357 8119442 832835..834037 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: gbm:Gbem_0782 major facilitator superfamily MFS_1; major facilitator superfamily protein 834037 8119442 Dd1591_0719 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003003078.1 832835 D 561229 CDS YP_003003079.1 251788358 8119443 complement(834091..835050) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B2748 LysR family transcriptional regulator; LysR family transcriptional regulator 835050 8119443 Dd1591_0720 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003079.1 834091 R 561229 CDS YP_003003080.1 251788359 8119444 835115..835225 1 NC_012912.1 hypothetical protein 835225 8119444 Dd1591_0721 Dickeya zeae Ech1591 hypothetical protein YP_003003080.1 835115 D 561229 CDS YP_003003081.1 251788360 8119445 835289..835597 1 NC_012912.1 PFAM: protein of unknown function DUF1330; KEGG: msu:MS1420 hypothetical protein; hypothetical protein 835597 8119445 Dd1591_0722 Dickeya zeae Ech1591 hypothetical protein YP_003003081.1 835289 D 561229 CDS YP_003003082.1 251788361 8119446 835630..836166 1 NC_012912.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: msu:MS2162 MdaB protein; NAD(P)H dehydrogenase (quinone) 836166 8119446 Dd1591_0723 Dickeya zeae Ech1591 NAD(P)H dehydrogenase (quinone) YP_003003082.1 835630 D 561229 CDS YP_003003083.1 251788362 8119447 complement(836280..836987) 1 NC_012912.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: spe:Spro_4489 GntR family transcriptional regulator; GntR family transcriptional regulator 836987 8119447 Dd1591_0724 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003003083.1 836280 R 561229 CDS YP_003003084.1 251788363 8119448 837193..838245 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_4488 extracellular solute-binding protein; extracellular solute-binding protein family 1 838245 8119448 Dd1591_0725 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003003084.1 837193 D 561229 CDS YP_003003085.1 251788364 8119449 838265..839089 1 NC_012912.1 KEGG: eta:ETA_31180 hypothetical protein; hypothetical protein 839089 8119449 Dd1591_0726 Dickeya zeae Ech1591 hypothetical protein YP_003003085.1 838265 D 561229 CDS YP_003003086.1 251788365 8119450 839086..839928 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 839928 8119450 Dd1591_0727 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003086.1 839086 D 561229 CDS YP_003003087.1 251788366 8119451 839915..840007 1 NC_012912.1 hypothetical protein 840007 8119451 Dd1591_0728 Dickeya zeae Ech1591 hypothetical protein YP_003003087.1 839915 D 561229 CDS YP_003003088.1 251788367 8119452 839994..840779 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_31160 ABC transporter, permease component, putative fragment; binding-protein-dependent transport systems inner membrane component 840779 8119452 Dd1591_0729 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003088.1 839994 D 561229 CDS YP_003003089.1 251788368 8119453 840781..841773 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: spe:Spro_4484 ABC transporter-related protein; ABC transporter 841773 8119453 Dd1591_0730 Dickeya zeae Ech1591 ABC transporter YP_003003089.1 840781 D 561229 CDS YP_003003090.1 251788369 8119454 complement(841880..843220) 1 NC_012912.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: plu:plu2421 hypothetical protein; filamentation induced by cAMP protein Fic 843220 8119454 Dd1591_0731 Dickeya zeae Ech1591 filamentation induced by cAMP protein Fic YP_003003090.1 841880 R 561229 CDS YP_003003091.1 251788370 8119455 complement(843297..844226) 1 NC_012912.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; LysR family transcriptional regulator 844226 8119455 Dd1591_0732 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003091.1 843297 R 561229 CDS YP_003003092.1 251788371 8119456 844339..845601 1 NC_012912.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 845601 8119456 Dd1591_0733 Dickeya zeae Ech1591 diaminopimelate decarboxylase YP_003003092.1 844339 D 561229 CDS YP_003003093.1 251788372 8119457 complement(845617..846627) 1 NC_012912.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: spe:Spro_3834 LacI family transcription regulator; LacI family transcriptional regulator 846627 8119457 Dd1591_0734 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003003093.1 845617 R 561229 CDS YP_003003094.1 251788373 8119458 complement(846754..847080) 1 NC_012912.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: eca:ECA3648 PTS system, cellobiose-specific IIA component; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 847080 8119458 Dd1591_0735 Dickeya zeae Ech1591 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_003003094.1 846754 R 561229 CDS YP_003003095.1 251788374 8119459 847314..848660 1 NC_012912.1 KEGG: eca:ECA3647 PTS system, lichenan-specific IIC component; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 848660 8119459 Dd1591_0736 Dickeya zeae Ech1591 PTS system lactose/cellobiose family transporter subunit IIC YP_003003095.1 847314 D 561229 CDS YP_003003096.1 251788375 8119460 848699..850135 1 NC_012912.1 PFAM: glycoside hydrolase family 1; KEGG: eca:ECA3646 putative 6-phospho-beta-glucosidase; glycoside hydrolase family 1 850135 8119460 Dd1591_0737 Dickeya zeae Ech1591 glycoside hydrolase family 1 YP_003003096.1 848699 D 561229 CDS YP_003003097.1 251788376 8119461 850144..850461 1 NC_012912.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA3645 PTS system, lichenan-specific IIB component; phosphotransferase system lactose/cellobiose-specific IIB subunit 850461 8119461 Dd1591_0738 Dickeya zeae Ech1591 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_003003097.1 850144 D 561229 CDS YP_003003098.1 251788377 8119462 850632..851399 1 NC_012912.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA3644 GntR family transcriptional regulator; GntR family transcriptional regulator 851399 8119462 Dd1591_0739 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003003098.1 850632 D 561229 CDS YP_003003099.1 251788378 8119463 851411..851905 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3643 GnaT-family acetyltransferase; GCN5-related N-acetyltransferase 851905 8119463 Dd1591_0740 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003003099.1 851411 D 561229 CDS YP_003003100.1 251788379 8119464 852670..853137 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: plu:plu0404 hypothetical protein; Hcp1 family type VI secretion system effector 853137 8119464 Dd1591_0741 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003003100.1 852670 D 561229 CDS YP_003003101.1 251788380 8119465 853487..854014 1 NC_012912.1 KEGG: ypy:YPK_2298 hypothetical protein; hypothetical protein 854014 8119465 Dd1591_0742 Dickeya zeae Ech1591 hypothetical protein YP_003003101.1 853487 D 561229 CDS YP_003003102.1 251788381 8119466 854885..855553 1 NC_012912.1 KEGG: rpt:Rpal_4354 hypothetical protein; hypothetical protein 855553 8119466 Dd1591_0743 Dickeya zeae Ech1591 hypothetical protein YP_003003102.1 854885 D 561229 CDS YP_003003103.1 251788382 8119467 855546..856262 1 NC_012912.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rpb:RPB_3724 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic 856262 8119467 Dd1591_0744 Dickeya zeae Ech1591 filamentation induced by cAMP protein Fic YP_003003103.1 855546 D 561229 CDS YP_003003104.1 251788383 8119468 complement(856514..857527) 1 NC_012912.1 controls transcription of galETKM; DNA-binding transcriptional regulator GalR 857527 8119468 Dd1591_0745 Dickeya zeae Ech1591 DNA-binding transcriptional regulator GalR YP_003003104.1 856514 R 561229 CDS YP_003003105.1 251788384 8119469 858343..859212 1 NC_012912.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: esa:ESA_02544 hypothetical protein; transcriptional antiterminator BglG 859212 8119469 Dd1591_0746 Dickeya zeae Ech1591 transcriptional antiterminator BglG YP_003003105.1 858343 D 561229 CDS YP_003003106.1 251788385 8119470 859387..861303 1 NC_012912.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: esa:ESA_02545 hypothetical protein; PTS system beta-glucoside-specific transporter subunit IIABC 861303 8119470 Dd1591_0747 Dickeya zeae Ech1591 PTS system beta-glucoside-specific transporter subunit IIABC YP_003003106.1 859387 D 561229 CDS YP_003003107.1 251788386 8119471 861320..862810 1 NC_012912.1 PFAM: glycoside hydrolase family 1; KEGG: esa:ESA_02546 hypothetical protein; glycoside hydrolase family 1 862810 8119471 Dd1591_0748 Dickeya zeae Ech1591 glycoside hydrolase family 1 YP_003003107.1 861320 D 561229 CDS YP_003003108.1 251788387 8119472 862866..864263 1 NC_012912.1 PFAM: glycoside hydrolase family 1; KEGG: esa:ESA_02547 hypothetical protein; glycoside hydrolase family 1 864263 8119472 Dd1591_0749 Dickeya zeae Ech1591 glycoside hydrolase family 1 YP_003003108.1 862866 D 561229 CDS YP_003003109.1 251788388 8119473 864563..866761 1 NC_012912.1 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 866761 8119473 Dd1591_0750 Dickeya zeae Ech1591 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase YP_003003109.1 864563 D 561229 CDS YP_003003110.1 251788389 8119474 866758..868005 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3640 hypothetical protein; lysophospholipid transporter LplT 868005 8119474 Dd1591_0751 Dickeya zeae Ech1591 lysophospholipid transporter LplT YP_003003110.1 866758 D 561229 CDS YP_003003111.1 251788390 8119475 868017..868472 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3639 putative acyltransferase; GCN5-related N-acetyltransferase 868472 8119475 Dd1591_0752 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003003111.1 868017 D 561229 CDS YP_003003112.1 251788391 8119477 868943..870334 1 NC_012912.1 KEGG: yen:YE1746 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor diguanylate cyclase 870334 8119477 Dd1591_0754 Dickeya zeae Ech1591 PAS/PAC sensor diguanylate cyclase YP_003003112.1 868943 D 561229 CDS YP_003003113.1 251788392 8119478 complement(870363..871502) 1 NC_012912.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 871502 8119478 Dd1591_0755 Dickeya zeae Ech1591 coproporphyrinogen III oxidase YP_003003113.1 870363 R 561229 CDS YP_003003114.1 251788393 8119479 complement(871495..872088) 1 NC_012912.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 872088 8119479 Dd1591_0756 Dickeya zeae Ech1591 putative deoxyribonucleotide triphosphate pyrophosphatase YP_003003114.1 871495 R 561229 CDS YP_003003115.1 251788394 8119480 complement(872135..872437) 1 NC_012912.1 PFAM: protein of unknown function DUF167; KEGG: spe:Spro_4033 hypothetical protein; hypothetical protein 872437 8119480 Dd1591_0757 Dickeya zeae Ech1591 hypothetical protein YP_003003115.1 872135 R 561229 CDS YP_003003116.1 251788395 8119481 complement(872422..872976) 1 NC_012912.1 PFAM: protein of unknown function YGGT; KEGG: eca:ECA3629 hypothetical protein; hypothetical protein 872976 8119481 Dd1591_0758 Dickeya zeae Ech1591 hypothetical protein YP_003003116.1 872422 R 561229 CDS YP_003003117.1 251788396 8119482 complement(873024..873845) 1 NC_012912.1 KEGG: eca:ECA3628 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 873845 8119482 Dd1591_0759 Dickeya zeae Ech1591 pyrroline-5-carboxylate reductase YP_003003117.1 873024 R 561229 CDS YP_003003118.1 251788397 8119483 complement(873879..874604) 1 NC_012912.1 PFAM: alanine racemase domain protein; KEGG: eca:ECA3627 putative alanine racemase; alanine racemase domain-containing protein 874604 8119483 Dd1591_0760 Dickeya zeae Ech1591 alanine racemase domain-containing protein YP_003003118.1 873879 R 561229 CDS YP_003003119.1 251788398 8119484 874626..875648 1 NC_012912.1 KEGG: eca:ECA3626 putative type II/IV secretion system protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 875648 8119484 Dd1591_0761 Dickeya zeae Ech1591 twitching motility protein YP_003003119.1 874626 D 561229 CDS YP_003003120.1 251788399 8119485 complement(875671..877740) 1 NC_012912.1 KEGG: sse:Ssed_3337 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase 877740 8119485 Dd1591_0762 Dickeya zeae Ech1591 PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase YP_003003120.1 875671 R 561229 CDS YP_003003121.1 251788400 8119486 complement(878125..879378) 1 NC_012912.1 PFAM: Amidohydrolase 3; amidohydrolase; KEGG: bcj:BCAM1457 cytosine deaminase; Cytosine deaminase 879378 8119486 Dd1591_0763 Dickeya zeae Ech1591 Cytosine deaminase YP_003003121.1 878125 R 561229 CDS YP_003003122.1 251788401 8119487 complement(879392..880327) 1 NC_012912.1 PFAM: helix-turn-helix Fis-type; KEGG: bte:BTH_II1640 DNA-binding protein; putative PucR family transcriptional regulator 880327 8119487 Dd1591_0764 Dickeya zeae Ech1591 putative PucR family transcriptional regulator YP_003003122.1 879392 R 561229 CDS YP_003003123.1 251788402 8119488 complement(880629..882215) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3624 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 882215 8119488 Dd1591_0765 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003123.1 880629 R 561229 CDS YP_003003124.1 251788403 8119489 882564..882989 1 NC_012912.1 negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 882989 8119489 Dd1591_0766 Dickeya zeae Ech1591 transcriptional repressor NsrR YP_003003124.1 882564 D 561229 CDS YP_003003125.1 251788404 8119490 883030..885498 1 NC_012912.1 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R 885498 8119490 Dd1591_0767 Dickeya zeae Ech1591 exoribonuclease R YP_003003125.1 883030 D 561229 CDS YP_003003126.1 251788405 8119491 885587..886321 1 NC_012912.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 886321 8119491 Dd1591_0768 Dickeya zeae Ech1591 23S rRNA (guanosine-2'-O-)-methyltransferase YP_003003126.1 885587 D 561229 CDS YP_003003127.1 251788406 8119492 complement(886371..887888) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0091 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 887888 8119492 Dd1591_0769 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003127.1 886371 R 561229 CDS YP_003003128.1 251788407 8119493 complement(888513..888788) 1 NC_012912.1 KEGG: gsu:GSU0757 putative lipoprotein; putative lipoprotein 888788 8119493 Dd1591_0770 Dickeya zeae Ech1591 putative lipoprotein YP_003003128.1 888513 R 561229 CDS YP_003003129.1 251788408 8119494 complement(888840..889208) 1 NC_012912.1 in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; putative biofilm stress and motility protein A 889208 8119494 Dd1591_0771 Dickeya zeae Ech1591 putative biofilm stress and motility protein A YP_003003129.1 888840 R 561229 CDS YP_003003130.1 251788409 8119495 complement(889375..891315) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3615 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 891315 8119495 Dd1591_0772 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003130.1 889375 R 561229 CDS YP_003003131.1 251788410 8119496 891541..892290 1 NC_012912.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 892290 8119496 Dd1591_0773 Dickeya zeae Ech1591 esterase YP_003003131.1 891541 D 561229 CDS YP_003003132.1 251788411 8119497 892500..892892 1 NC_012912.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 892892 rpsF 8119497 rpsF Dickeya zeae Ech1591 30S ribosomal protein S6 YP_003003132.1 892500 D 561229 CDS YP_003003133.1 251788412 8119498 892898..893218 1 NC_012912.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 893218 8119498 Dd1591_0775 Dickeya zeae Ech1591 primosomal replication protein N YP_003003133.1 892898 D 561229 CDS YP_003003134.1 251788413 8119499 893223..893450 1 NC_012912.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 893450 rpsR 8119499 rpsR Dickeya zeae Ech1591 30S ribosomal protein S18 YP_003003134.1 893223 D 561229 CDS YP_003003135.1 251788414 8119500 893492..893941 1 NC_012912.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 893941 rplI 8119500 rplI Dickeya zeae Ech1591 50S ribosomal protein L9 YP_003003135.1 893492 D 561229 CDS YP_003003136.1 251788415 8120594 894060..894434 1 NC_012912.1 PFAM: protein of unknown function DUF488; KEGG: eca:ECA3609 hypothetical protein; hypothetical protein 894434 8120594 Dd1591_0778 Dickeya zeae Ech1591 hypothetical protein YP_003003136.1 894060 D 561229 CDS YP_003003137.1 251788416 8120595 complement(894418..895122) 1 NC_012912.1 PFAM: Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: eca:ECA3608 hypothetical protein; Opacity-associated protein A 895122 8120595 Dd1591_0779 Dickeya zeae Ech1591 Opacity-associated protein A YP_003003137.1 894418 R 561229 CDS YP_003003138.1 251788417 8120596 895348..895968 1 NC_012912.1 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 895968 8120596 Dd1591_0780 Dickeya zeae Ech1591 peptidyl-prolyl cis-trans isomerase YP_003003138.1 895348 D 561229 CDS YP_003003139.1 251788418 8120597 896281..896646 1 NC_012912.1 KEGG: spe:Spro_3414 hypothetical protein; hypothetical protein 896646 8120597 Dd1591_0781 Dickeya zeae Ech1591 hypothetical protein YP_003003139.1 896281 D 561229 CDS YP_003003140.1 251788419 8120598 complement(896743..897408) 1 NC_012912.1 Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein 897408 8120598 Dd1591_0782 Dickeya zeae Ech1591 iron-sulfur cluster repair di-iron protein YP_003003140.1 896743 R 561229 CDS YP_003003141.1 251788420 8120599 complement(897541..899487) 1 NC_012912.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 899487 cpdB 8120599 cpdB Dickeya zeae Ech1591 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein YP_003003141.1 897541 R 561229 CDS YP_003003142.1 251788421 8120600 899720..900460 1 NC_012912.1 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase 900460 8120600 Dd1591_0784 Dickeya zeae Ech1591 adenosine-3'(2'),5'-bisphosphate nucleotidase YP_003003142.1 899720 D 561229 CDS YP_003003143.1 251788422 8120601 900902..901108 1 NC_012912.1 PFAM: protein of unknown function DUF1107; KEGG: eca:ECA3599 hypothetical protein; hypothetical protein 901108 8120601 Dd1591_0785 Dickeya zeae Ech1591 hypothetical protein YP_003003143.1 900902 D 561229 CDS YP_003003144.1 251788423 8120602 complement(901563..902879) 1 NC_012912.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: eca:ECA3598 hypothetical protein; hypothetical protein 902879 8120602 Dd1591_0786 Dickeya zeae Ech1591 hypothetical protein YP_003003144.1 901563 R 561229 CDS YP_003003145.1 251788424 8120603 complement(903018..903659) 1 NC_012912.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 903659 8120603 Dd1591_0787 Dickeya zeae Ech1591 methionine sulfoxide reductase A YP_003003145.1 903018 R 561229 CDS YP_003003146.1 251788425 8120604 903994..905778 1 NC_012912.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: eca:ECA3596 hypothetical protein; surface antigen (D15) 905778 8120604 Dd1591_0788 Dickeya zeae Ech1591 surface antigen (D15) YP_003003146.1 903994 D 561229 CDS YP_003003147.1 251788426 8120605 905784..909524 1 NC_012912.1 PFAM: protein of unknown function DUF490; KEGG: eca:ECA3595 hypothetical protein; hypothetical protein 909524 8120605 Dd1591_0789 Dickeya zeae Ech1591 hypothetical protein YP_003003147.1 905784 D 561229 CDS YP_003003148.1 251788427 8120606 909527..909889 1 NC_012912.1 PFAM: AIG2 family protein; KEGG: plu:plu4552 hypothetical protein; AIG2 family protein 909889 8120606 Dd1591_0790 Dickeya zeae Ech1591 AIG2 family protein YP_003003148.1 909527 D 561229 CDS YP_003003149.1 251788428 8120607 complement(910022..910552) 1 NC_012912.1 PFAM: Inorganic pyrophosphatase; KEGG: spe:Spro_0462 inorganic pyrophosphatase; Inorganic diphosphatase 910552 8120607 Dd1591_0791 Dickeya zeae Ech1591 Inorganic diphosphatase YP_003003149.1 910022 R 561229 CDS YP_003003150.1 251788429 8120608 910858..912486 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3592 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 912486 8120608 Dd1591_0792 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003150.1 910858 D 561229 CDS YP_003003151.1 251788430 8120609 complement(912540..913181) 1 NC_012912.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 913181 8120609 Dd1591_0793 Dickeya zeae Ech1591 putative glycerol-3-phosphate acyltransferase PlsY YP_003003151.1 912540 R 561229 CDS YP_003003152.1 251788431 8120610 913289..913651 1 NC_012912.1 KEGG: eca:ECA3590 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 913651 8120610 Dd1591_0794 Dickeya zeae Ech1591 dihydroneopterin aldolase YP_003003152.1 913289 D 561229 CDS YP_003003153.1 251788432 8120611 913824..914645 1 NC_012912.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 914645 8120611 Dd1591_0795 Dickeya zeae Ech1591 UDP pyrophosphate phosphatase YP_003003153.1 913824 D 561229 CDS YP_003003154.1 251788433 8120612 complement(914690..915937) 1 NC_012912.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: eca:ECA3588 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 915937 8120612 Dd1591_0796 Dickeya zeae Ech1591 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_003003154.1 914690 R 561229 CDS YP_003003155.1 251788434 8120613 complement(916155..916778) 1 NC_012912.1 SMART: SH3 domain protein; KEGG: eca:ECA3587 putative signal transduction protein; putative signal transduction protein 916778 8120613 Dd1591_0797 Dickeya zeae Ech1591 putative signal transduction protein YP_003003155.1 916155 R 561229 CDS YP_003003156.1 251788435 8120614 917067..918398 1 NC_012912.1 PFAM: adenylate cyclase; KEGG: eca:ECA3586 hypothetical protein; adenylate cyclase 918398 8120614 Dd1591_0798 Dickeya zeae Ech1591 adenylate cyclase YP_003003156.1 917067 D 561229 CDS YP_003003157.1 251788436 8120615 918433..921333 1 NC_012912.1 PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: eca:ECA3585 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; (Glutamate--ammonia-ligase) adenylyltransferase 921333 8120615 Dd1591_0799 Dickeya zeae Ech1591 (Glutamate--ammonia-ligase) adenylyltransferase YP_003003157.1 918433 D 561229 CDS YP_003003158.1 251788437 8120616 921445..922872 1 NC_012912.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 922872 8120616 Dd1591_0800 Dickeya zeae Ech1591 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_003003158.1 921445 D 561229 CDS YP_003003159.1 251788438 8120617 922884..924932 1 NC_012912.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 924932 ligA 8120617 ligA Dickeya zeae Ech1591 NAD-dependent DNA ligase LigA YP_003003159.1 922884 D 561229 CDS YP_003003160.1 251788439 8120618 924939..925160 1 NC_012912.1 KEGG: eca:ECA3582 hypothetical protein; hypothetical protein 925160 8120618 Dd1591_0802 Dickeya zeae Ech1591 hypothetical protein YP_003003160.1 924939 D 561229 CDS YP_003003161.1 251788440 8120619 complement(925384..925746) 1 NC_012912.1 KEGG: eca:ECA3581 hypothetical protein; hypothetical protein 925746 8120619 Dd1591_0803 Dickeya zeae Ech1591 hypothetical protein YP_003003161.1 925384 R 561229 CDS YP_003003162.1 251788441 8120620 complement(926174..926506) 1 NC_012912.1 KEGG: eca:ECA3581 hypothetical protein; hypothetical protein 926506 8120620 Dd1591_0804 Dickeya zeae Ech1591 hypothetical protein YP_003003162.1 926174 R 561229 CDS YP_003003163.1 251788442 8120621 complement(926666..928201) 1 NC_012912.1 KEGG: eca:ECA3579 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 928201 8120621 Dd1591_0805 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003163.1 926666 R 561229 CDS YP_003003164.1 251788443 8120622 complement(928891..930465) 1 NC_012912.1 KEGG: eca:ECA3578 D-galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 930465 8120622 Dd1591_0806 Dickeya zeae Ech1591 galactarate dehydratase YP_003003164.1 928891 R 561229 CDS YP_003003165.1 251788444 8120623 931080..932432 1 NC_012912.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA3577 glucarate transporter; d-galactonate transporter 932432 8120623 Dd1591_0807 Dickeya zeae Ech1591 d-galactonate transporter YP_003003165.1 931080 D 561229 CDS YP_003003166.1 251788445 8120624 932429..933814 1 NC_012912.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA3576 glucarate dehydratase; Glucarate dehydratase 933814 8120624 Dd1591_0808 Dickeya zeae Ech1591 Glucarate dehydratase YP_003003166.1 932429 D 561229 CDS YP_003003167.1 251788446 8120625 933830..935170 1 NC_012912.1 KEGG: eca:ECA3575 glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 935170 8120625 Dd1591_0809 Dickeya zeae Ech1591 glucarate dehydratase YP_003003167.1 933830 D 561229 CDS YP_003003168.1 251788447 8120626 935276..936046 1 NC_012912.1 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase 936046 8120626 Dd1591_0810 Dickeya zeae Ech1591 alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_003003168.1 935276 D 561229 CDS YP_003003169.1 251788448 8120627 936121..937005 1 NC_012912.1 catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase 937005 garR 8120627 garR Dickeya zeae Ech1591 tartronate semialdehyde reductase YP_003003169.1 936121 D 561229 CDS YP_003003170.1 251788449 8120628 937110..938252 1 NC_012912.1 KEGG: eca:ECA3572 glycerate kinase 2; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase 938252 8120628 Dd1591_0812 Dickeya zeae Ech1591 glycerate kinase YP_003003170.1 937110 D 561229 CDS YP_003003171.1 251788450 8120629 complement(938363..941131) 1 NC_012912.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 941131 8120629 Dd1591_0813 Dickeya zeae Ech1591 hybrid sensory histidine kinase BarA YP_003003171.1 938363 R 561229 CDS YP_003003172.1 251788451 8120630 941192..942526 1 NC_012912.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 942526 rumA 8120630 rumA Dickeya zeae Ech1591 23S rRNA 5-methyluridine methyltransferase YP_003003172.1 941192 D 561229 CDS YP_003003173.1 251788452 8120631 942536..944773 1 NC_012912.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 944773 relA 8120631 relA Dickeya zeae Ech1591 GDP/GTP pyrophosphokinase YP_003003173.1 942536 D 561229 CDS YP_003003174.1 251788453 8120632 944841..945638 1 NC_012912.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 945638 mazG 8120632 mazG Dickeya zeae Ech1591 nucleoside triphosphate pyrophosphohydrolase YP_003003174.1 944841 D 561229 CDS YP_003003175.1 251788454 8120633 945865..947502 1 NC_012912.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 947502 pyrG 8120633 pyrG Dickeya zeae Ech1591 CTP synthetase YP_003003175.1 945865 D 561229 CDS YP_003003176.1 251788455 8120634 947600..948898 1 NC_012912.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 948898 eno 8120634 eno Dickeya zeae Ech1591 phosphopyruvate hydratase YP_003003176.1 947600 D 561229 CDS YP_003003177.1 251788456 8120635 949422..950996 1 NC_012912.1 KEGG: eca:ECA3560 oligogalacturonide transporter; oligogalacturonide transporter 950996 8120635 Dd1591_0819 Dickeya zeae Ech1591 oligogalacturonide transporter YP_003003177.1 949422 D 561229 CDS YP_003003178.1 251788457 8120636 951090..952229 1 NC_012912.1 PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein; glycosyl hydrolase family 88 952229 8120636 Dd1591_0820 Dickeya zeae Ech1591 glycosyl hydrolase family 88 YP_003003178.1 951090 D 561229 CDS YP_003003179.1 251788458 8120637 complement(952299..953273) 1 NC_012912.1 PFAM: beta-lactamase domain protein; KEGG: eca:ECA3555 metallo hydrolase; beta-lactamase domain-containing protein 953273 8120637 Dd1591_0821 Dickeya zeae Ech1591 beta-lactamase domain-containing protein YP_003003179.1 952299 R 561229 CDS YP_003003180.1 251788459 8120638 953495..954166 1 NC_012912.1 KEGG: eca:ECA3554 hypothetical protein; hypothetical protein 954166 8120638 Dd1591_0822 Dickeya zeae Ech1591 hypothetical protein YP_003003180.1 953495 D 561229 CDS YP_003003181.1 251788460 8120639 complement(954203..954571) 1 NC_012912.1 TIGRFAM: 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: eca:ECA3553 putative 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydropterin synthase 954571 8120639 Dd1591_0823 Dickeya zeae Ech1591 6-pyruvoyl tetrahydropterin synthase YP_003003181.1 954203 R 561229 CDS YP_003003182.1 251788461 8120640 complement(954701..956035) 1 NC_012912.1 PFAM: glycoside hydrolase family 28; KEGG: eca:ECA3552 putative polygalacturonase; glycoside hydrolase family 28 956035 8120640 Dd1591_0824 Dickeya zeae Ech1591 glycoside hydrolase family 28 YP_003003182.1 954701 R 561229 CDS YP_003003183.1 251788462 8120641 956572..957861 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3551 periplasmic binding protein precursor; extracellular solute-binding protein family 1 957861 8120641 Dd1591_0825 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003003183.1 956572 D 561229 CDS YP_003003184.1 251788463 8120642 complement(957879..959588) 1 NC_012912.1 KEGG: eca:ECA3550 hypothetical protein; hypothetical protein 959588 8120642 Dd1591_0826 Dickeya zeae Ech1591 hypothetical protein YP_003003184.1 957879 R 561229 CDS YP_003003185.1 251788464 8120643 959989..961812 1 NC_012912.1 TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: eca:ECA3547 sulfite reductase subunit alpha; sulfite reductase (NADPH) flavoprotein, alpha chain 961812 8120643 Dd1591_0827 Dickeya zeae Ech1591 sulfite reductase (NADPH) flavoprotein, alpha chain YP_003003185.1 959989 D 561229 CDS YP_003003186.1 251788465 8120644 961812..963527 1 NC_012912.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 963527 8120644 Dd1591_0828 Dickeya zeae Ech1591 sulfite reductase subunit beta YP_003003186.1 961812 D 561229 CDS YP_003003187.1 251788466 8120645 963540..964274 1 NC_012912.1 TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: eca:ECA3545 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 964274 8120645 Dd1591_0829 Dickeya zeae Ech1591 phosphoadenosine phosphosulfate reductase YP_003003187.1 963540 D 561229 CDS YP_003003188.1 251788467 8120646 964604..966025 1 NC_012912.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA3544 siroheme synthase [includes: uroporphyrin-III C-methyltransferase; precorrin-2 oxidase; ferrochelatase]; uroporphyrin-III C-methyltransferase 966025 8120646 Dd1591_0830 Dickeya zeae Ech1591 uroporphyrin-III C-methyltransferase YP_003003188.1 964604 D 561229 CDS YP_003003189.1 251788468 8120647 966036..966944 1 NC_012912.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 966944 8120647 Dd1591_0831 Dickeya zeae Ech1591 sulfate adenylyltransferase subunit 2 YP_003003189.1 966036 D 561229 CDS YP_003003190.1 251788469 8120648 966956..968383 1 NC_012912.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 968383 cysN 8120648 cysN Dickeya zeae Ech1591 sulfate adenylyltransferase subunit 1 YP_003003190.1 966956 D 561229 CDS YP_003003191.1 251788470 8120649 968385..968999 1 NC_012912.1 KEGG: yps:YPTB0767 adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase; adenylylsulfate kinase 968999 8120649 Dd1591_0833 Dickeya zeae Ech1591 adenylylsulfate kinase YP_003003191.1 968385 D 561229 CDS YP_003003192.1 251788471 8120650 969154..969504 1 NC_012912.1 KEGG: eca:ECA3540 hypothetical protein; hypothetical protein 969504 8120650 Dd1591_0834 Dickeya zeae Ech1591 hypothetical protein YP_003003192.1 969154 D 561229 CDS YP_003003193.1 251788472 8120651 969725..970078 1 NC_012912.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 970078 ftsB 8120651 ftsB Dickeya zeae Ech1591 cell division protein FtsB YP_003003193.1 969725 D 561229 CDS YP_003003194.1 251788473 8120652 970081..970788 1 NC_012912.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: eca:ECA3535 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 970788 8120652 Dd1591_0836 Dickeya zeae Ech1591 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003003194.1 970081 D 561229 CDS YP_003003195.1 251788474 8120653 970813..971310 1 NC_012912.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 971310 ispF 8120653 ispF Dickeya zeae Ech1591 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_003003195.1 970813 D 561229 CDS YP_003003196.1 251788475 8120654 971304..972362 1 NC_012912.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 972362 truD 8120654 truD Dickeya zeae Ech1591 tRNA pseudouridine synthase D YP_003003196.1 971304 D 561229 CDS YP_003003197.1 251788476 8120655 972479..973105 1 NC_012912.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 973105 pcm 8120655 pcm Dickeya zeae Ech1591 protein-L-isoaspartate O-methyltransferase YP_003003197.1 972479 D 561229 CDS YP_003003198.1 251788477 8120656 973427..974641 1 NC_012912.1 PFAM: Peptidase M23; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: eca:ECA3531 lipoprotein NlpD; peptidase M23 974641 8120656 Dd1591_0840 Dickeya zeae Ech1591 peptidase M23 YP_003003198.1 973427 D 561229 CDS YP_003003199.1 251788478 8120657 974695..975687 1 NC_012912.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 975687 8120657 Dd1591_0841 Dickeya zeae Ech1591 RNA polymerase sigma factor RpoS YP_003003199.1 974695 D 561229 CDS YP_003003200.1 251788479 8120658 complement(975764..977482) 1 NC_012912.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 977482 8120658 Dd1591_0842 Dickeya zeae Ech1591 prolyl-tRNA synthetase YP_003003200.1 975764 R 561229 CDS YP_003003201.1 251788480 8120659 complement(977598..978305) 1 NC_012912.1 PFAM: protein of unknown function UPF0066; KEGG: yen:YE3257 hypothetical protein; hypothetical protein 978305 8120659 Dd1591_0843 Dickeya zeae Ech1591 hypothetical protein YP_003003201.1 977598 R 561229 CDS YP_003003202.1 251788481 8120660 complement(978302..978709) 1 NC_012912.1 KEGG: eca:ECA3527 outer membrane lipoprotein; outer membrane lipoprotein 978709 rcsF 8120660 rcsF Dickeya zeae Ech1591 outer membrane lipoprotein YP_003003202.1 978302 R 561229 CDS YP_003003203.1 251788482 8120661 complement(978824..979639) 1 NC_012912.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: eca:ECA3526 DL-methionine transporter substrate-binding subunit; DL-methionine transporter substrate-binding subunit 979639 metQ 8120661 metQ Dickeya zeae Ech1591 DL-methionine transporter substrate-binding subunit YP_003003203.1 978824 R 561229 CDS YP_003003204.1 251788483 8120662 complement(979702..980355) 1 NC_012912.1 part of the MetNIQ methionine uptake system; DL-methionine transporter permease subunit 980355 8120662 Dd1591_0846 Dickeya zeae Ech1591 DL-methionine transporter permease subunit YP_003003204.1 979702 R 561229 CDS YP_003003205.1 251788484 8120663 complement(980348..981379) 1 NC_012912.1 KEGG: seh:SeHA_C0285 D-methionine ABC transporter, ATP-binding protein; TIGRFAM: D-methionine ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; D-methionine ABC transporter ATPase subunit 981379 8120663 Dd1591_0847 Dickeya zeae Ech1591 D-methionine ABC transporter ATPase subunit YP_003003205.1 980348 R 561229 CDS YP_003003206.1 251788485 8120664 981560..982126 1 NC_012912.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 982126 8120664 Dd1591_0848 Dickeya zeae Ech1591 D,D-heptose 1,7-bisphosphate phosphatase YP_003003206.1 981560 D 561229 CDS YP_003003207.1 251788486 8120671 988017..989318 1 NC_012912.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA3522 alpha-ketoglutarate transporter; alpha-ketoglutarate transporter 989318 8120671 Dd1591_0849 Dickeya zeae Ech1591 alpha-ketoglutarate transporter YP_003003207.1 988017 D 561229 CDS YP_003003208.1 251788487 8120672 complement(989315..989644) 1 NC_012912.1 KEGG: eum:ECUMN_2912 conserved hypothetical protein YfiM; putative exported protein; hypothetical protein 989644 8120672 Dd1591_0850 Dickeya zeae Ech1591 hypothetical protein YP_003003208.1 989315 R 561229 CDS YP_003003209.1 251788488 8120673 complement(989739..991094) 1 NC_012912.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 991094 pssA 8120673 pssA Dickeya zeae Ech1591 phosphatidylserine synthase YP_003003209.1 989739 R 561229 CDS YP_003003210.1 251788489 8117667 complement(991248..993914) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: eca:ECA3519 putative acyl-CoA synthetase; GCN5-related N-acetyltransferase 993914 8117667 Dd1591_0852 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003003210.1 991248 R 561229 CDS YP_003003211.1 251788490 8117668 complement(993948..994664) 1 NC_012912.1 PFAM: DTW domain containing protein; KEGG: eca:ECA3518 hypothetical protein; DTW domain-containing protein 994664 8117668 Dd1591_0853 Dickeya zeae Ech1591 DTW domain-containing protein YP_003003211.1 993948 R 561229 CDS YP_003003212.1 251788491 8117669 complement(994768..995193) 1 NC_012912.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: eca:ECA3517 thioredoxin 2; thioredoxin 2 995193 8117669 Dd1591_0854 Dickeya zeae Ech1591 thioredoxin 2 YP_003003212.1 994768 R 561229 CDS YP_003003213.1 251788492 8117670 995300..995539 1 NC_012912.1 hypothetical protein 995539 8117670 Dd1591_0855 Dickeya zeae Ech1591 hypothetical protein YP_003003213.1 995300 D 561229 CDS YP_003003214.1 251788493 8117671 995572..996765 1 NC_012912.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: eca:ECA3516 putative methyltransferase; putative methyltransferase 996765 8117671 Dd1591_0856 Dickeya zeae Ech1591 putative methyltransferase YP_003003214.1 995572 D 561229 CDS YP_003003215.1 251788494 8117672 complement(996842..998374) 1 NC_012912.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3513 multidrug resistance protein B; EmrB/QacA subfamily drug resistance transporter 998374 8117672 Dd1591_0857 Dickeya zeae Ech1591 EmrB/QacA subfamily drug resistance transporter YP_003003215.1 996842 R 561229 CDS YP_003003216.1 251788495 8117673 complement(998393..999568) 1 NC_012912.1 TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: eca:ECA3512 multidrug resistance protein A; efflux pump membrane protein 999568 8117673 Dd1591_0858 Dickeya zeae Ech1591 efflux pump membrane protein YP_003003216.1 998393 R 561229 CDS YP_003003217.1 251788496 8117674 complement(999739..1000251) 1 NC_012912.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 1000251 8117674 Dd1591_0859 Dickeya zeae Ech1591 transcriptional repressor MprA YP_003003217.1 999739 R 561229 CDS YP_003003218.1 251788497 8117675 complement(1000429..1000770) 1 NC_012912.1 KEGG: eca:ECA3510 hypothetical protein; hypothetical protein 1000770 8117675 Dd1591_0860 Dickeya zeae Ech1591 hypothetical protein YP_003003218.1 1000429 R 561229 CDS YP_003003219.1 251788498 8117676 complement(1000767..1001480) 1 NC_012912.1 PFAM: AzlC family protein; KEGG: eca:ECA3509 putative amino acid transporter; AzlC family protein 1001480 8117676 Dd1591_0861 Dickeya zeae Ech1591 AzlC family protein YP_003003219.1 1000767 R 561229 CDS YP_003003220.1 251788499 8117677 complement(1001481..1002680) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3508 putative transport protein; major facilitator superfamily protein 1002680 8117677 Dd1591_0862 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003003220.1 1001481 R 561229 CDS YP_003003221.1 251788500 8117678 complement(1002928..1003926) 1 NC_012912.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 1003926 proX 8117678 proX Dickeya zeae Ech1591 glycine betaine transporter periplasmic subunit YP_003003221.1 1002928 R 561229 CDS YP_003003222.1 251788501 8117679 complement(1004056..1005258) 1 NC_012912.1 with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 1005258 8117679 Dd1591_0864 Dickeya zeae Ech1591 glycine betaine transporter membrane protein YP_003003222.1 1004056 R 561229 CDS YP_003003223.1 251788502 8117680 complement(1005251..1006453) 1 NC_012912.1 KEGG: eca:ECA3502 glycine betaine/L-proline transport ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; glycine/betaine/L-proline ABC transporter ATPase 1006453 8117680 Dd1591_0865 Dickeya zeae Ech1591 glycine/betaine/L-proline ABC transporter ATPase YP_003003223.1 1005251 R 561229 CDS YP_003003224.1 251788503 8117681 complement(1007099..1008583) 1 NC_012912.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: kpe:KPK_2569 permease, cytosine/purine, uracil, thiamine, allantoin family; cytosine/purines uracil thiamine allantoin permease 1008583 8117681 Dd1591_0866 Dickeya zeae Ech1591 cytosine/purines uracil thiamine allantoin permease YP_003003224.1 1007099 R 561229 CDS YP_003003225.1 251788504 8117682 1008737..1009480 1 NC_012912.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eta:ETA_26320 transcriptional regulator, GntR family; GntR family transcriptional regulator 1009480 8117682 Dd1591_0867 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003003225.1 1008737 D 561229 CDS YP_003003226.1 251788505 8117683 1009477..1010214 1 NC_012912.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: spe:Spro_0915 Asp/Glu racemase; Asp/Glu/hydantoin racemase 1010214 8117683 Dd1591_0868 Dickeya zeae Ech1591 Asp/Glu/hydantoin racemase YP_003003226.1 1009477 D 561229 CDS YP_003003227.1 251788506 8117684 1010258..1011205 1 NC_012912.1 KEGG: spe:Spro_0916 chitin deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein 1011205 8117684 Dd1591_0869 Dickeya zeae Ech1591 urate catabolism protein YP_003003227.1 1010258 D 561229 CDS YP_003003228.1 251788507 8117685 1011456..1012802 1 NC_012912.1 PFAM: HipA domain protein; KEGG: spc:Sputcn32_2916 HipA domain-containing protein; HipA domain-containing protein 1012802 8117685 Dd1591_0870 Dickeya zeae Ech1591 HipA domain-containing protein YP_003003228.1 1011456 D 561229 CDS YP_003003229.1 251788508 8117686 1012799..1013311 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: spe:Spro_3692 putative transcriptional regulator; XRE family transcriptional regulator 1013311 8117686 Dd1591_0871 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003229.1 1012799 D 561229 CDS YP_003003230.1 251788509 8117687 complement(1013365..1013760) 1 NC_012912.1 KEGG: eca:ECA3500 hypothetical protein; hypothetical protein 1013760 8117687 Dd1591_0872 Dickeya zeae Ech1591 hypothetical protein YP_003003230.1 1013365 R 561229 CDS YP_003003231.1 251788510 8117688 complement(1013757..1015169) 1 NC_012912.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1015169 8117688 Dd1591_0873 Dickeya zeae Ech1591 amidase YP_003003231.1 1013757 R 561229 CDS YP_003003232.1 251788511 8117689 complement(1015166..1015363) 1 NC_012912.1 KEGG: eca:ECA3498 hypothetical protein; hypothetical protein 1015363 8117689 Dd1591_0874 Dickeya zeae Ech1591 hypothetical protein YP_003003232.1 1015166 R 561229 CDS YP_003003233.1 251788512 8117690 complement(1015388..1016977) 1 NC_012912.1 KEGG: eca:ECA3497 putative gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1016977 8117690 Dd1591_0875 Dickeya zeae Ech1591 gamma-glutamyltransferase YP_003003233.1 1015388 R 561229 CDS YP_003003234.1 251788513 8117691 1017242..1018081 1 NC_012912.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: eca:ECA3496 putative transcriptional regulator; RpiR family transcriptional regulator 1018081 8117691 Dd1591_0876 Dickeya zeae Ech1591 RpiR family transcriptional regulator YP_003003234.1 1017242 D 561229 CDS YP_003003235.1 251788514 8117692 1018426..1019148 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA3495 putative amino acid ABC transporter, substrate binding protein; extracellular solute-binding protein family 3 1019148 8117692 Dd1591_0877 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003003235.1 1018426 D 561229 CDS YP_003003236.1 251788515 8117693 1019158..1019823 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3494 putative amino acid ABC transporter, permease protein; polar amino acid ABC transporter permease 1019823 8117693 Dd1591_0878 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003236.1 1019158 D 561229 CDS YP_003003237.1 251788516 8117694 1019823..1020479 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3493 putative amino acid ABC transporter, permease protein; polar amino acid ABC transporter permease 1020479 8117694 Dd1591_0879 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003237.1 1019823 D 561229 CDS YP_003003238.1 251788517 8117695 1020460..1021191 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3492 putative amino acid ABC transporter, ATP-binding protein; ABC transporter 1021191 8117695 Dd1591_0880 Dickeya zeae Ech1591 ABC transporter YP_003003238.1 1020460 D 561229 CDS YP_003003239.1 251788518 8117696 1021253..1022497 1 NC_012912.1 PFAM: aminotransferase class V; KEGG: eca:ECA3491 purine catabolism protein; aminotransferase class V 1022497 8117696 Dd1591_0881 Dickeya zeae Ech1591 aminotransferase class V YP_003003239.1 1021253 D 561229 CDS YP_003003240.1 251788519 8117697 1022509..1023759 1 NC_012912.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1023759 8117697 Dd1591_0882 Dickeya zeae Ech1591 allantoate amidohydrolase YP_003003240.1 1022509 D 561229 CDS YP_003003241.1 251788520 8117698 complement(1024140..1024907) 1 NC_012912.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eca:ECA3489 hypothetical protein; hypothetical protein 1024907 8117698 Dd1591_0883 Dickeya zeae Ech1591 hypothetical protein YP_003003241.1 1024140 R 561229 CDS YP_003003242.1 251788521 8117699 complement(1024895..1026052) 1 NC_012912.1 catalyzes the transfer of an amino moiety; putative aminotransferase 1026052 8117699 Dd1591_0884 Dickeya zeae Ech1591 putative aminotransferase YP_003003242.1 1024895 R 561229 CDS YP_003003243.1 251788522 8117700 1026254..1026868 1 NC_012912.1 catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 1026868 8117700 Dd1591_0885 Dickeya zeae Ech1591 methylthioribulose-1-phosphate dehydratase YP_003003243.1 1026254 D 561229 CDS YP_003003244.1 251788523 8117701 1026865..1027575 1 NC_012912.1 KEGG: eca:ECA3486 enolase-phosphatase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1027575 8117701 Dd1591_0886 Dickeya zeae Ech1591 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_003003244.1 1026865 D 561229 CDS YP_003003245.1 251788524 8117702 1027572..1028114 1 NC_012912.1 PFAM: Acireductone dioxygenase ARD; KEGG: eca:ECA3485 oxidase; Acireductone dioxygenase ARD 1028114 8117702 Dd1591_0887 Dickeya zeae Ech1591 Acireductone dioxygenase ARD YP_003003245.1 1027572 D 561229 CDS YP_003003246.1 251788525 8117703 complement(1028192..1029223) 1 NC_012912.1 KEGG: eca:ECA3477 putative translation initiation factor EIF-2B; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 1029223 8117703 Dd1591_0888 Dickeya zeae Ech1591 translation initiation factor, aIF-2BI family YP_003003246.1 1028192 R 561229 CDS YP_003003247.1 251788526 8117704 1029494..1030696 1 NC_012912.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1030696 mtnK 8117704 mtnK Dickeya zeae Ech1591 methylthioribose kinase YP_003003247.1 1029494 D 561229 CDS YP_003003248.1 251788527 8117705 complement(1030751..1033195) 1 NC_012912.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1033195 fadE 8117705 fadE Dickeya zeae Ech1591 acyl-CoA dehydrogenase YP_003003248.1 1030751 R 561229 CDS YP_003003249.1 251788528 8117706 1033529..1034110 1 NC_012912.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1034110 gmhA 8117706 gmhA Dickeya zeae Ech1591 phosphoheptose isomerase YP_003003249.1 1033529 D 561229 CDS YP_003003250.1 251788529 8117707 1034166..1034933 1 NC_012912.1 PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein; glutamine amidotransferase class-II 1034933 8117707 Dd1591_0892 Dickeya zeae Ech1591 glutamine amidotransferase class-II YP_003003250.1 1034166 D 561229 CDS YP_003003251.1 251788530 8117708 complement(1034904..1035629) 1 NC_012912.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eca:ECA3471 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1035629 8117708 Dd1591_0893 Dickeya zeae Ech1591 ErfK/YbiS/YcfS/YnhG family protein YP_003003251.1 1034904 R 561229 CDS YP_003003252.1 251788531 8117709 1036047..1037105 1 NC_012912.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1037105 8117709 Dd1591_0894 Dickeya zeae Ech1591 DNA polymerase IV YP_003003252.1 1036047 D 561229 CDS YP_003003253.1 251788532 8117710 complement(1037199..1038659) 1 NC_012912.1 KEGG: yen:YE3206 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; aminoacyl-histidine dipeptidase 1038659 8117710 Dd1591_0895 Dickeya zeae Ech1591 aminoacyl-histidine dipeptidase YP_003003253.1 1037199 R 561229 CDS YP_003003254.1 251788533 8117711 complement(1038909..1039103) 1 NC_012912.1 hypothetical protein 1039103 8117711 Dd1591_0896 Dickeya zeae Ech1591 hypothetical protein YP_003003254.1 1038909 R 561229 CDS YP_003003255.1 251788534 8117712 1039335..1039793 1 NC_012912.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1039793 8117712 Dd1591_0897 Dickeya zeae Ech1591 xanthine-guanine phosphoribosyltransferase YP_003003255.1 1039335 D 561229 CDS YP_003003256.1 251788535 8117713 1039995..1041245 1 NC_012912.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 1041245 frsA 8117713 frsA Dickeya zeae Ech1591 fermentation/respiration switch protein YP_003003256.1 1039995 D 561229 CDS YP_003003257.1 251788536 8117714 1041604..1041963 1 NC_012912.1 PFAM: transcriptional regulator Crl; KEGG: cko:CKO_02956 DNA-binding transcriptional regulator Crl; transcriptional regulator Crl 1041963 8117714 Dd1591_0899 Dickeya zeae Ech1591 transcriptional regulator Crl YP_003003257.1 1041604 D 561229 CDS YP_003003258.1 251788537 8117715 1042088..1043191 1 NC_012912.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1043191 8117715 Dd1591_0900 Dickeya zeae Ech1591 gamma-glutamyl kinase YP_003003258.1 1042088 D 561229 CDS YP_003003259.1 251788538 8117716 1043202..1044455 1 NC_012912.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1044455 proA 8117716 proA Dickeya zeae Ech1591 gamma-glutamyl phosphate reductase YP_003003259.1 1043202 D 561229 CDS YP_003003260.1 251788539 8117718 complement(1044855..1045103) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA0964 putative regulatory protein; XRE family transcriptional regulator 1045103 8117718 Dd1591_0902 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003260.1 1044855 R 561229 CDS YP_003003261.1 251788540 8117719 complement(1045205..1045438) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA0964 putative regulatory protein; XRE family transcriptional regulator 1045438 8117719 Dd1591_0903 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003261.1 1045205 R 561229 CDS YP_003003262.1 251788541 8117720 1045538..1045786 1 NC_012912.1 KEGG: eca:ECA0513 putative phage transcriptional regulator; putative transcriptional regulator Nlp 1045786 8117720 Dd1591_0904 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003003262.1 1045538 D 561229 CDS YP_003003263.1 251788542 8117721 complement(1053353..1053640) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: vco:VC0395_A2677 CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 1053640 8117721 Dd1591_0905 Dickeya zeae Ech1591 CRISPR-associated protein Cas2 YP_003003263.1 1053353 R 561229 CDS YP_003003264.1 251788543 8117722 complement(1053618..1054493) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: vco:VC0395_A2676 CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 1054493 8117722 Dd1591_0906 Dickeya zeae Ech1591 CRISPR-associated protein Cas1 YP_003003264.1 1053618 R 561229 CDS YP_003003265.1 251788544 8117723 complement(1054494..1055210) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: vco:VC0395_A2675 CRISPR-associated protein Cas5, ecoli subtype; Cas5 family CRISPR-associated protein 1055210 8117723 Dd1591_0907 Dickeya zeae Ech1591 Cas5 family CRISPR-associated protein YP_003003265.1 1054494 R 561229 CDS YP_003003266.1 251788545 8117724 complement(1055222..1056256) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Cse4 family; KEGG: vco:VC0395_A2674 CRISPR-associated protein, CSE4 family; Cse4 family CRISPR-associated protein 1056256 8117724 Dd1591_0908 Dickeya zeae Ech1591 Cse4 family CRISPR-associated protein YP_003003266.1 1055222 R 561229 CDS YP_003003267.1 251788546 8117725 complement(1056288..1056935) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: vco:VC0395_A2673 CRISPR-associated protein, CSE3 family; Cse3 family CRISPR-associated protein 1056935 8117725 Dd1591_0909 Dickeya zeae Ech1591 Cse3 family CRISPR-associated protein YP_003003267.1 1056288 R 561229 CDS YP_003003268.1 251788547 8117726 complement(1056928..1057494) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Cse2 family; KEGG: vco:VC0395_A2672 CRISPR-associated protein, CSE2 family; Cse2 family CRISPR-associated protein 1057494 8117726 Dd1591_0910 Dickeya zeae Ech1591 Cse2 family CRISPR-associated protein YP_003003268.1 1056928 R 561229 CDS YP_003003269.1 251788548 8117727 complement(1057508..1059031) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Cse1 family; KEGG: vco:VC0395_A2671 CRISPR-associated protein, CSE1 family; Cse1 family CRISPR-associated protein 1059031 8117727 Dd1591_0911 Dickeya zeae Ech1591 Cse1 family CRISPR-associated protein YP_003003269.1 1057508 R 561229 CDS YP_003003270.1 251788549 8117728 complement(1059035..1061650) 1 NC_012912.1 KEGG: vco:VC0395_A2670 CRISPR-associated helicase Cas3 domain protein; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; CRISPR-associated helicase Cas3 1061650 8117728 Dd1591_0912 Dickeya zeae Ech1591 CRISPR-associated helicase Cas3 YP_003003270.1 1059035 R 561229 CDS YP_003003271.1 251788550 8117729 complement(1061825..1062664) 1 NC_012912.1 KEGG: cja:CJA_2458 hypothetical protein; hypothetical protein 1062664 8117729 Dd1591_0913 Dickeya zeae Ech1591 hypothetical protein YP_003003271.1 1061825 R 561229 CDS YP_003003272.1 251788551 8117730 complement(1063263..1063553) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bps:BPSL0756 putative DNA-binding protein; XRE family transcriptional regulator 1063553 8117730 Dd1591_0914 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003272.1 1063263 R 561229 CDS YP_003003273.1 251788552 8117731 1063676..1064062 1 NC_012912.1 KEGG: nmu:Nmul_A1533 hypothetical protein; hypothetical protein 1064062 8117731 Dd1591_0915 Dickeya zeae Ech1591 hypothetical protein YP_003003273.1 1063676 D 561229 CDS YP_003003274.1 251788553 8117732 complement(1064104..1065756) 1 NC_012912.1 PFAM: replication gene A; KEGG: spe:Spro_0874 replication gene A; replication gene A protein 1065756 8117732 Dd1591_0916 Dickeya zeae Ech1591 replication gene A protein YP_003003274.1 1064104 R 561229 CDS YP_003003275.1 251788554 8117733 complement(1065770..1066033) 1 NC_012912.1 KEGG: sbn:Sbal195_3111 hypothetical protein; hypothetical protein 1066033 8117733 Dd1591_0917 Dickeya zeae Ech1591 hypothetical protein YP_003003275.1 1065770 R 561229 CDS YP_003003276.1 251788555 8117734 complement(1066138..1066872) 1 NC_012912.1 KEGG: sat:SYN_02230 putative cytoplasmic protein; hypothetical protein 1066872 8117734 Dd1591_0918 Dickeya zeae Ech1591 hypothetical protein YP_003003276.1 1066138 R 561229 CDS YP_003003277.1 251788556 8117735 complement(1066900..1068246) 1 NC_012912.1 PFAM: integrase family protein; KEGG: psa:PST_1489 integrase; integrase family protein 1068246 8117735 Dd1591_0919 Dickeya zeae Ech1591 integrase family protein YP_003003277.1 1066900 R 561229 CDS YP_003003278.1 251788557 8117737 1069290..1070300 1 NC_012912.1 KEGG: ypi:YpsIP31758_0549 HNH endonuclease domain-containing protein; hypothetical protein 1070300 8117737 Dd1591_0921 Dickeya zeae Ech1591 hypothetical protein YP_003003278.1 1069290 D 561229 CDS YP_003003279.1 251788558 8117738 1070407..1070643 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: ypy:YPK_3752 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 1070643 8117738 Dd1591_0922 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003003279.1 1070407 D 561229 CDS YP_003003280.1 251788559 8117739 1070772..1072184 1 NC_012912.1 KEGG: ecd:ECDH10B_2791 CP4-57 prophage; hypothetical protein; CP4-57 prophage protein 1072184 8117739 Dd1591_0923 Dickeya zeae Ech1591 CP4-57 prophage protein YP_003003280.1 1070772 D 561229 CDS YP_003003281.1 251788560 8117740 1072412..1073035 1 NC_012912.1 KEGG: ecd:ECDH10B_2792 CP4-57 prophage; hypothetical protein; CP4-57 prophage protein 1073035 8117740 Dd1591_0924 Dickeya zeae Ech1591 CP4-57 prophage protein YP_003003281.1 1072412 D 561229 CDS YP_003003282.1 251788561 8117741 complement(1073108..1074715) 1 NC_012912.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: rpi:Rpic_0450 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 1074715 8117741 Dd1591_0925 Dickeya zeae Ech1591 type I restriction-modification system, M subunit YP_003003282.1 1073108 R 561229 CDS YP_003003283.1 251788562 8117742 complement(1074712..1075884) 1 NC_012912.1 anticodon nuclease 1075884 8117742 Dd1591_0926 Dickeya zeae Ech1591 anticodon nuclease YP_003003283.1 1074712 R 561229 CDS YP_003003284.1 251788563 8117744 complement(1077177..1077362) 1 NC_012912.1 hypothetical protein 1077362 8117744 Dd1591_0928 Dickeya zeae Ech1591 hypothetical protein YP_003003284.1 1077177 R 561229 CDS YP_003003285.1 251788564 8117745 complement(1077362..1080334) 1 NC_012912.1 KEGG: rpi:Rpic_0447 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase; type I site-specific deoxyribonuclease, HsdR family 1080334 8117745 Dd1591_0929 Dickeya zeae Ech1591 type I site-specific deoxyribonuclease, HsdR family YP_003003285.1 1077362 R 561229 CDS YP_003003286.1 251788565 8117746 1080810..1081676 1 NC_012912.1 PFAM: GTP-binding protein HSR1-related; KEGG: ecd:ECDH10B_0238 CP4-6 prophage; GTP-binding protein; GTP-binding protein HSR1-related 1081676 8117746 Dd1591_0930 Dickeya zeae Ech1591 GTP-binding protein HSR1-related YP_003003286.1 1080810 D 561229 CDS YP_003003287.1 251788566 8121074 1081773..1082594 1 NC_012912.1 PFAM: protein of unknown function DUF932; KEGG: ecd:ECDH10B_0237 CP4-6 prophage; hypothetical protein; hypothetical protein 1082594 8121074 Dd1591_0931 Dickeya zeae Ech1591 hypothetical protein YP_003003287.1 1081773 D 561229 CDS YP_003003288.1 251788567 8121075 1082625..1083098 1 NC_012912.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: ent:Ent638_0474 DNA repair protein RadC; DNA repair protein RadC 1083098 8121075 Dd1591_0932 Dickeya zeae Ech1591 DNA repair protein RadC YP_003003288.1 1082625 D 561229 CDS YP_003003289.1 251788568 8121076 1083163..1083477 1 NC_012912.1 PFAM: protein of unknown function DUF1219; KEGG: eca:ECA2853 hypothetical protein; hypothetical protein 1083477 8121076 Dd1591_0933 Dickeya zeae Ech1591 hypothetical protein YP_003003289.1 1083163 D 561229 CDS YP_003003290.1 251788569 8121078 1084533..1085180 1 NC_012912.1 KEGG: spc:Sputcn32_3528 hypothetical protein; hypothetical protein 1085180 8121078 Dd1591_0935 Dickeya zeae Ech1591 hypothetical protein YP_003003290.1 1084533 D 561229 CDS YP_003003291.1 251788570 8121079 1085194..1086243 1 NC_012912.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: neu:NE1364 Appr-1-p processing enzyme; Appr-1-p processing domain-containing protein 1086243 8121079 Dd1591_0936 Dickeya zeae Ech1591 Appr-1-p processing domain-containing protein YP_003003291.1 1085194 D 561229 CDS YP_003003292.1 251788571 8121080 1086309..1086449 1 NC_012912.1 hypothetical protein 1086449 8121080 Dd1591_0937 Dickeya zeae Ech1591 hypothetical protein YP_003003292.1 1086309 D 561229 CDS YP_003003293.1 251788572 8121081 complement(1086520..1087440) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psp:PSPPH_2193 LysR family transcriptional regulator; LysR family transcriptional regulator 1087440 8121081 Dd1591_0938 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003293.1 1086520 R 561229 CDS YP_003003294.1 251788573 8121082 1087566..1088012 1 NC_012912.1 PFAM: protein of unknown function UPF0074; KEGG: pst:PSPTO_2406 hypothetical protein; BadM/Rrf2 family transcriptional regulator 1088012 8121082 Dd1591_0939 Dickeya zeae Ech1591 BadM/Rrf2 family transcriptional regulator YP_003003294.1 1087566 D 561229 CDS YP_003003295.1 251788574 8121083 1088171..1088818 1 NC_012912.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pst:PSPTO_2407 hypothetical protein; NADP oxidoreductase coenzyme F420-dependent 1088818 8121083 Dd1591_0940 Dickeya zeae Ech1591 NADP oxidoreductase coenzyme F420-dependent YP_003003295.1 1088171 D 561229 CDS YP_003003296.1 251788575 8121084 1088928..1089827 1 NC_012912.1 PFAM: Pirin domain protein; KEGG: psp:PSPPH_2192 pirin; Pirin domain-containing protein 1089827 8121084 Dd1591_0941 Dickeya zeae Ech1591 Pirin domain-containing protein YP_003003296.1 1088928 D 561229 CDS YP_003003297.1 251788576 8121086 1090544..1090870 1 NC_012912.1 PFAM: Insertion element protein; KEGG: sdy:SDY_P213 iso-IS1 ORF1; Insertion element protein 1090870 8121086 Dd1591_0943 Dickeya zeae Ech1591 Insertion element protein YP_003003297.1 1090544 D 561229 CDS YP_003003298.1 251788577 8121088 1091198..1091455 1 NC_012912.1 KEGG: eca:ECA2042 hypothetical protein; hypothetical protein 1091455 8121088 Dd1591_0945 Dickeya zeae Ech1591 hypothetical protein YP_003003298.1 1091198 D 561229 CDS YP_003003299.1 251788578 8121089 1091712..1092731 1 NC_012912.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: pmr:PMI0007 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 1092731 8121089 Dd1591_0946 Dickeya zeae Ech1591 Sel1 domain-containing protein repeat-containing protein YP_003003299.1 1091712 D 561229 CDS YP_003003300.1 251788579 8121091 complement(1094115..1094942) 1 NC_012912.1 KEGG: aha:AHA_1993 ada regulatory protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; AraC family transcriptional regulator 1094942 8121091 Dd1591_0948 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003003300.1 1094115 R 561229 CDS YP_003003301.1 251788580 8121092 1095377..1096516 1 NC_012912.1 KEGG: eca:ECA3130 poly(glycerophosphate chain) D-alanine transfer protein; poly(glycerophosphate chain) D-alanine transfer protein 1096516 8121092 Dd1591_0949 Dickeya zeae Ech1591 poly(glycerophosphate chain) D-alanine transfer protein YP_003003301.1 1095377 D 561229 CDS YP_003003302.1 251788581 8121093 1096513..1096635 1 NC_012912.1 hypothetical protein 1096635 8121093 Dd1591_0950 Dickeya zeae Ech1591 hypothetical protein YP_003003302.1 1096513 D 561229 CDS YP_003003303.1 251788582 8121094 1096646..1097764 1 NC_012912.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: eca:ECA3129 peptidoglycan biosynthesis protein; membrane bound O-acyl transferase MBOAT family protein 1097764 8121094 Dd1591_0951 Dickeya zeae Ech1591 membrane bound O-acyl transferase MBOAT family protein YP_003003303.1 1096646 D 561229 CDS YP_003003304.1 251788583 8121095 1097761..1099197 1 NC_012912.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA3128 putative D-alanine--poly(phosphoribitol) ligase subunit 1; AMP-dependent synthetase and ligase 1099197 8121095 Dd1591_0952 Dickeya zeae Ech1591 AMP-dependent synthetase and ligase YP_003003304.1 1097761 D 561229 CDS YP_003003305.1 251788584 8121096 1099216..1099437 1 NC_012912.1 KEGG: eca:ECA3127 acyl carrier protein; acyl carrier protein 1099437 8121096 Dd1591_0953 Dickeya zeae Ech1591 acyl carrier protein YP_003003305.1 1099216 D 561229 CDS YP_003003306.1 251788585 8121097 complement(1099501..1100541) 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_6323 AraC family transcriptional regulator; AraC family transcriptional regulator 1100541 8121097 Dd1591_0954 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003003306.1 1099501 R 561229 CDS YP_003003307.1 251788586 8121098 1100711..1101484 1 NC_012912.1 KEGG: bcm:Bcenmc03_1718 hypothetical protein; hypothetical protein 1101484 8121098 Dd1591_0955 Dickeya zeae Ech1591 hypothetical protein YP_003003307.1 1100711 D 561229 CDS YP_003003308.1 251788587 8121099 1101635..1102258 1 NC_012912.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bch:Bcen2424_3293 (acyl-carrier-protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) 1102258 8121099 Dd1591_0956 Dickeya zeae Ech1591 NAD(P)H dehydrogenase (quinone) YP_003003308.1 1101635 D 561229 CDS YP_003003309.1 251788588 8121100 1102281..1102589 1 NC_012912.1 PFAM: YCII-related; KEGG: ent:Ent638_0388 hypothetical protein; YCII-like protein 1102589 8121100 Dd1591_0957 Dickeya zeae Ech1591 YCII-like protein YP_003003309.1 1102281 D 561229 CDS YP_003003310.1 251788589 8121101 1102833..1104524 1 NC_012912.1 KEGG: efe:EFER_2212 sensory kinase in two-component system with YehT; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; signal transduction histidine kinase, LytS 1104524 8121101 Dd1591_0958 Dickeya zeae Ech1591 signal transduction histidine kinase, LytS YP_003003310.1 1102833 D 561229 CDS YP_003003311.1 251788590 8121102 1104518..1105243 1 NC_012912.1 unknown function; when overproduced it confers drug-resistance; putative two-component response-regulatory protein YehT 1105243 8121102 Dd1591_0959 Dickeya zeae Ech1591 putative two-component response-regulatory protein YehT YP_003003311.1 1104518 D 561229 CDS YP_003003312.1 251788591 8121103 1105673..1107820 1 NC_012912.1 PFAM: carbon starvation protein CstA; KEGG: eum:ECUMN_4963 conserved hypothetical protein; putative inner membrane protein; carbon starvation protein CstA 1107820 8121103 Dd1591_0960 Dickeya zeae Ech1591 carbon starvation protein CstA YP_003003312.1 1105673 D 561229 CDS YP_003003313.1 251788592 8121104 1107926..1108129 1 NC_012912.1 PFAM: protein of unknown function DUF466; KEGG: eca:ECA1188 hypothetical protein; hypothetical protein 1108129 8121104 Dd1591_0961 Dickeya zeae Ech1591 hypothetical protein YP_003003313.1 1107926 D 561229 CDS YP_003003314.1 251788593 8121105 1108158..1109126 1 NC_012912.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sbc:SbBS512_E4878 CobW/P47K family protein; putative GTP-binding protein YjiA 1109126 8121105 Dd1591_0962 Dickeya zeae Ech1591 putative GTP-binding protein YjiA YP_003003314.1 1108158 D 561229 CDS YP_003003315.1 251788594 8121106 complement(1109204..1110247) 1 NC_012912.1 activates the transcription of the ethanolamine utilization operon; transcriptional regulator EutR 1110247 8121106 Dd1591_0963 Dickeya zeae Ech1591 transcriptional regulator EutR YP_003003315.1 1109204 R 561229 CDS YP_003003316.1 251788595 8121107 complement(1110476..1111855) 1 NC_012912.1 PFAM: Aldehyde Dehydrogenase; KEGG: ecz:ECS88_2634 putative aldehyde dehydrogenase, ethanolamine utilization protein; aldehyde dehydrogenase 1111855 8121107 Dd1591_0964 Dickeya zeae Ech1591 aldehyde dehydrogenase YP_003003316.1 1110476 R 561229 CDS YP_003003317.1 251788596 8121108 complement(1112295..1113983) 1 NC_012912.1 PFAM: peptidase U34 dipeptidase; KEGG: dal:Dalk_1471 peptidase U34 dipeptidase; peptidase U34 dipeptidase 1113983 8121108 Dd1591_0965 Dickeya zeae Ech1591 peptidase U34 dipeptidase YP_003003317.1 1112295 R 561229 CDS YP_003003318.1 251788597 8121109 complement(1114082..1115506) 1 NC_012912.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: bxe:Bxe_C0076 putative phosphatidylserine decarboxylase; phosphatidylserine decarboxylase-related 1115506 8121109 Dd1591_0966 Dickeya zeae Ech1591 phosphatidylserine decarboxylase-related YP_003003318.1 1114082 R 561229 CDS YP_003003319.1 251788598 8121110 complement(1115793..1116785) 1 NC_012912.1 membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease protein YjfF 1116785 8121110 Dd1591_0967 Dickeya zeae Ech1591 inner membrane ABC transporter permease protein YjfF YP_003003319.1 1115793 R 561229 CDS YP_003003320.1 251788599 8121111 complement(1116772..1117809) 1 NC_012912.1 PFAM: inner-membrane translocator; KEGG: kpe:KPK_5041 putative sugar ABC transporter, permease protein; inner-membrane translocator 1117809 8121111 Dd1591_0968 Dickeya zeae Ech1591 inner-membrane translocator YP_003003320.1 1116772 R 561229 CDS YP_003003321.1 251788600 8121112 complement(1117823..1119325) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_0413 ABC transporter related; ABC transporter 1119325 8121112 Dd1591_0969 Dickeya zeae Ech1591 ABC transporter YP_003003321.1 1117823 R 561229 CDS YP_003003322.1 251788601 8121113 complement(1119403..1120359) 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpe:KPK_5043 putative sugar ABC transporter, periplasmic sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 1120359 8121113 Dd1591_0970 Dickeya zeae Ech1591 periplasmic binding protein/LacI transcriptional regulator YP_003003322.1 1119403 R 561229 CDS YP_003003323.1 251788602 8121114 1121340..1121435 1 NC_012912.1 hypothetical protein 1121435 8121114 Dd1591_0971 Dickeya zeae Ech1591 hypothetical protein YP_003003323.1 1121340 D 561229 CDS YP_003003324.1 251788603 8121115 complement(1121524..1122117) 1 NC_012912.1 SMART: Ankyrin; KEGG: pap:PSPA7_5252 hypothetical protein; ankyrin 1122117 8121115 Dd1591_0972 Dickeya zeae Ech1591 ankyrin YP_003003324.1 1121524 R 561229 CDS YP_003003325.1 251788604 8121116 complement(1122178..1123725) 1 NC_012912.1 PFAM: Catalase domain protein; KEGG: pau:PA14_61040 catalase; catalase 1123725 8121116 Dd1591_0973 Dickeya zeae Ech1591 catalase YP_003003325.1 1122178 R 561229 CDS YP_003003326.1 251788605 8121117 complement(1124565..1125338) 1 NC_012912.1 TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpe:KPK_2269 acetoin dehydrogenase; acetoin reductase 1125338 8121117 Dd1591_0974 Dickeya zeae Ech1591 acetoin reductase YP_003003326.1 1124565 R 561229 CDS YP_003003327.1 251788606 8121118 1125673..1126326 1 NC_012912.1 hypothetical protein 1126326 8121118 Dd1591_0975 Dickeya zeae Ech1591 hypothetical protein YP_003003327.1 1125673 D 561229 CDS YP_003003328.1 251788607 8121119 1126427..1127056 1 NC_012912.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_25920 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1127056 8121119 Dd1591_0976 Dickeya zeae Ech1591 lysine exporter protein LysE/YggA YP_003003328.1 1126427 D 561229 CDS YP_003003329.1 251788608 8121120 1127477..1128010 1 NC_012912.1 PFAM: cytochrome B561; KEGG: esa:ESA_01704 hypothetical protein; cytochrome B561 1128010 8121120 Dd1591_0977 Dickeya zeae Ech1591 cytochrome B561 YP_003003329.1 1127477 D 561229 CDS YP_003003330.1 251788609 8121121 complement(1128075..1128530) 1 NC_012912.1 PFAM: cyclase/dehydrase; KEGG: eca:ECA3372 hypothetical protein; cyclase/dehydrase 1128530 8121121 Dd1591_0978 Dickeya zeae Ech1591 cyclase/dehydrase YP_003003330.1 1128075 R 561229 CDS YP_003003331.1 251788610 8121122 complement(1130219..1130689) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bte:BTH_II0494 acetyltransferase; GCN5-related N-acetyltransferase 1130689 8121122 Dd1591_0979 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003003331.1 1130219 R 561229 CDS YP_003003332.1 251788611 8121123 1130957..1131445 1 NC_012912.1 PFAM: CinA domain protein; KEGG: eca:ECA3370 competence damage-inducible protein A; competence damage-inducible protein A 1131445 8121123 Dd1591_0980 Dickeya zeae Ech1591 competence damage-inducible protein A YP_003003332.1 1130957 D 561229 CDS YP_003003333.1 251788612 8121124 1131555..1132631 1 NC_012912.1 KEGG: eca:ECA3369 recombinase A; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 1132631 8121124 Dd1591_0981 Dickeya zeae Ech1591 recA protein YP_003003333.1 1131555 D 561229 CDS YP_003003334.1 251788613 8121125 1132674..1133162 1 NC_012912.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1133162 recX 8121125 recX Dickeya zeae Ech1591 recombination regulator RecX YP_003003334.1 1132674 D 561229 CDS YP_003003335.1 251788614 8121126 1133300..1135927 1 NC_012912.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1135927 alaS 8121126 alaS Dickeya zeae Ech1591 alanyl-tRNA synthetase YP_003003335.1 1133300 D 561229 CDS YP_003003336.1 251788615 8121127 1136250..1136435 1 NC_012912.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1136435 8121127 Dd1591_0984 Dickeya zeae Ech1591 carbon storage regulator YP_003003336.1 1136250 D 561229 CDS YP_003003337.1 251788616 8121132 1137363..1137929 1 NC_012912.1 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 1137929 8121132 Dd1591_0985 Dickeya zeae Ech1591 fructose-1-phosphatase YP_003003337.1 1137363 D 561229 CDS YP_003003338.1 251788617 8121133 1137926..1138354 1 NC_012912.1 KEGG: eca:ECA3364 hypothetical protein; hypothetical protein 1138354 8121133 Dd1591_0986 Dickeya zeae Ech1591 hypothetical protein YP_003003338.1 1137926 D 561229 CDS YP_003003339.1 251788618 8121134 1138425..1139987 1 NC_012912.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 1139987 8121134 Dd1591_0987 Dickeya zeae Ech1591 glutamate--cysteine ligase YP_003003339.1 1138425 D 561229 CDS YP_003003340.1 251788619 8121135 1140145..1140660 1 NC_012912.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1140660 8121135 Dd1591_0988 Dickeya zeae Ech1591 S-ribosylhomocysteinase YP_003003340.1 1140145 D 561229 CDS YP_003003341.1 251788620 8121136 complement(1140759..1141553) 1 NC_012912.1 PFAM: cytochrome c assembly protein; KEGG: eca:ECA3361 hypothetical protein; cytochrome c assembly protein 1141553 8121136 Dd1591_0989 Dickeya zeae Ech1591 cytochrome c assembly protein YP_003003341.1 1140759 R 561229 CDS YP_003003342.1 251788621 8121137 1141726..1143087 1 NC_012912.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 1143087 8121137 Dd1591_0990 Dickeya zeae Ech1591 signal recognition particle protein YP_003003342.1 1141726 D 561229 CDS YP_003003343.1 251788622 8121138 1143245..1143493 1 NC_012912.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1143493 rpsP 8121138 rpsP Dickeya zeae Ech1591 30S ribosomal protein S16 YP_003003343.1 1143245 D 561229 CDS YP_003003344.1 251788623 8121139 1143512..1144060 1 NC_012912.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1144060 rimM 8121139 rimM Dickeya zeae Ech1591 16S rRNA-processing protein RimM YP_003003344.1 1143512 D 561229 CDS YP_003003345.1 251788624 8121140 1144101..1144856 1 NC_012912.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1144856 trmD 8121140 trmD Dickeya zeae Ech1591 tRNA (guanine-N(1)-)-methyltransferase YP_003003345.1 1144101 D 561229 CDS YP_003003346.1 251788625 8121141 1144919..1145266 1 NC_012912.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1145266 rplS 8121141 rplS Dickeya zeae Ech1591 50S ribosomal protein L19 YP_003003346.1 1144919 D 561229 CDS YP_003003347.1 251788626 8121142 complement(1145343..1146293) 1 NC_012912.1 KEGG: eca:ECA3355 hypothetical protein; hypothetical protein 1146293 8121142 Dd1591_0995 Dickeya zeae Ech1591 hypothetical protein YP_003003347.1 1145343 R 561229 CDS YP_003003348.1 251788627 8121143 complement(1146605..1146982) 1 NC_012912.1 KEGG: eca:ECA3354 hypothetical protein; hypothetical protein 1146982 8121143 Dd1591_0996 Dickeya zeae Ech1591 hypothetical protein YP_003003348.1 1146605 R 561229 CDS YP_003003349.1 251788628 8121144 1147575..1148639 1 NC_012912.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1148639 8121144 Dd1591_0997 Dickeya zeae Ech1591 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003003349.1 1147575 D 561229 CDS YP_003003350.1 251788629 8121145 1148652..1149770 1 NC_012912.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1149770 tyrA 8121145 tyrA Dickeya zeae Ech1591 bifunctional chorismate mutase/prephenate dehydrogenase YP_003003350.1 1148652 D 561229 CDS YP_003003351.1 251788630 8121146 complement(1149866..1151047) 1 NC_012912.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase 1151047 pheA 8121146 pheA Dickeya zeae Ech1591 bifunctional chorismate mutase/prephenate dehydratase YP_003003351.1 1149866 R 561229 CDS YP_003003352.1 251788631 8121147 complement(1151412..1151747) 1 NC_012912.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: eca:ECA3349 putative sigma(54) modulation protein; sigma 54 modulation protein/ribosomal protein S30EA 1151747 8121147 Dd1591_1000 Dickeya zeae Ech1591 sigma 54 modulation protein/ribosomal protein S30EA YP_003003352.1 1151412 R 561229 CDS YP_003003353.1 251788632 8121148 complement(1152035..1152766) 1 NC_012912.1 with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO 1152766 8121148 Dd1591_1001 Dickeya zeae Ech1591 outer membrane protein assembly complex subunit YfiO YP_003003353.1 1152035 R 561229 CDS YP_003003354.1 251788633 8121149 1152900..1153877 1 NC_012912.1 KEGG: eca:ECA3347 23S rRNA pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase, RluA family 1153877 8121149 Dd1591_1002 Dickeya zeae Ech1591 pseudouridine synthase, RluA family YP_003003354.1 1152900 D 561229 CDS YP_003003355.1 251788634 8121150 1153882..1154622 1 NC_012912.1 PFAM: protein of unknown function DUF152; KEGG: eca:ECA3346 hypothetical protein; hypothetical protein 1154622 8121150 Dd1591_1003 Dickeya zeae Ech1591 hypothetical protein YP_003003355.1 1153882 D 561229 CDS YP_003003356.1 251788635 8121151 1154757..1157330 1 NC_012912.1 KEGG: eca:ECA3345 protein disaggregation chaperone; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; protein disaggregation chaperone 1157330 8121151 Dd1591_1004 Dickeya zeae Ech1591 protein disaggregation chaperone YP_003003356.1 1154757 D 561229 CDS YP_003003357.1 251788636 8120277 1163115..1163906 1 NC_012912.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: eca:ECA3344 hypothetical protein; hypothetical protein 1163906 8120277 Dd1591_1005 Dickeya zeae Ech1591 hypothetical protein YP_003003357.1 1163115 D 561229 CDS YP_003003358.1 251788637 8120278 complement(1163963..1165360) 1 NC_012912.1 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D 1165360 mltD 8120278 mltD Dickeya zeae Ech1591 membrane-bound lytic murein transglycosylase D YP_003003358.1 1163963 R 561229 CDS YP_003003359.1 251788638 8120279 complement(1165431..1166186) 1 NC_012912.1 KEGG: eca:ECA3342 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 1166186 8120279 Dd1591_1007 Dickeya zeae Ech1591 hydroxyacylglutathione hydrolase YP_003003359.1 1165431 R 561229 CDS YP_003003360.1 251788639 8120280 1166232..1166951 1 NC_012912.1 PFAM: Methyltransferase type 11; KEGG: spe:Spro_0910 methyltransferase type 11; type 11 methyltransferase 1166951 8120280 Dd1591_1008 Dickeya zeae Ech1591 type 11 methyltransferase YP_003003360.1 1166232 D 561229 CDS YP_003003361.1 251788640 8120281 complement(1166979..1167443) 1 NC_012912.1 PFAM: ribonuclease H; KEGG: ypi:YpsIP31758_1054 ribonuclease H; Ribonuclease H 1167443 8120281 Dd1591_1009 Dickeya zeae Ech1591 Ribonuclease H YP_003003361.1 1166979 R 561229 CDS YP_003003362.1 251788641 8120282 1167499..1168233 1 NC_012912.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1168233 8120282 Dd1591_1010 Dickeya zeae Ech1591 DNA polymerase III subunit epsilon YP_003003362.1 1167499 D 561229 CDS YP_003003363.1 251788642 8120284 complement(1168492..1169454) 1 NC_012912.1 PFAM: ribonucleotide reductase; KEGG: eca:ECA3338 ribonucleotide-diphosphate reductase subunit beta; Ribonucleoside-diphosphate reductase 1169454 8120284 Dd1591_1011 Dickeya zeae Ech1591 Ribonucleoside-diphosphate reductase YP_003003363.1 1168492 R 561229 CDS YP_003003364.1 251788643 8120285 complement(1169494..1171641) 1 NC_012912.1 KEGG: ypp:YPDSF_1623 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha 1171641 8120285 Dd1591_1012 Dickeya zeae Ech1591 ribonucleoside-diphosphate reductase subunit alpha YP_003003364.1 1169494 R 561229 CDS YP_003003365.1 251788644 8120286 complement(1171620..1172030) 1 NC_012912.1 TIGRFAM: NrdI protein; PFAM: NrdI family protein; KEGG: eca:ECA3336 ribonucleotide reductase stimulatory protein; NrdI protein 1172030 8120286 Dd1591_1013 Dickeya zeae Ech1591 NrdI protein YP_003003365.1 1171620 R 561229 CDS YP_003003366.1 251788645 8120287 complement(1172038..1172271) 1 NC_012912.1 PFAM: glutaredoxin; KEGG: eca:ECA3335 putative glutaredoxin; glutaredoxin 1172271 8120287 Dd1591_1014 Dickeya zeae Ech1591 glutaredoxin YP_003003366.1 1172038 R 561229 CDS YP_003003367.1 251788646 8120288 complement(1172496..1173290) 1 NC_012912.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 1173290 8120288 Dd1591_1015 Dickeya zeae Ech1591 S-adenosylmethionine decarboxylase YP_003003367.1 1172496 R 561229 CDS YP_003003368.1 251788647 8120289 complement(1173321..1174184) 1 NC_012912.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1174184 8120289 Dd1591_1016 Dickeya zeae Ech1591 spermidine synthase YP_003003368.1 1173321 R 561229 CDS YP_003003369.1 251788648 8120290 complement(1174293..1174640) 1 NC_012912.1 KEGG: eca:ECA3332 hypothetical protein; hypothetical protein 1174640 8120290 Dd1591_1017 Dickeya zeae Ech1591 hypothetical protein YP_003003369.1 1174293 R 561229 CDS YP_003003370.1 251788649 8120291 1174881..1176488 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3331 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 1176488 8120291 Dd1591_1018 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003370.1 1174881 D 561229 CDS YP_003003371.1 251788650 8120292 1176496..1177560 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA3330 ATP transporter ATP-binding protein; ABC transporter 1177560 8120292 Dd1591_1019 Dickeya zeae Ech1591 ABC transporter YP_003003371.1 1176496 D 561229 CDS YP_003003372.1 251788651 8120293 complement(1177708..1178040) 1 NC_012912.1 KEGG: asa:ASA_3604 hypothetical protein; hypothetical protein 1178040 8120293 Dd1591_1020 Dickeya zeae Ech1591 hypothetical protein YP_003003372.1 1177708 R 561229 CDS YP_003003373.1 251788652 8120294 complement(1178195..1178647) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3329 putative acetyltransferase; GCN5-related N-acetyltransferase 1178647 8120294 Dd1591_1021 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003003373.1 1178195 R 561229 CDS YP_003003374.1 251788653 8120295 1178782..1179315 1 NC_012912.1 KEGG: eca:ECA3328 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1179315 8120295 Dd1591_1022 Dickeya zeae Ech1591 hypoxanthine phosphoribosyltransferase YP_003003374.1 1178782 D 561229 CDS YP_003003375.1 251788654 8120296 complement(1179444..1180085) 1 NC_012912.1 catalyzes the interconversion of bicarbonate and carbon dioxide; carbonic anhydrase 1180085 8120296 Dd1591_1023 Dickeya zeae Ech1591 carbonic anhydrase YP_003003375.1 1179444 R 561229 CDS YP_003003376.1 251788655 8120297 1180213..1181136 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_3996 ABC transporter-related protein; ABC transporter 1181136 8120297 Dd1591_1024 Dickeya zeae Ech1591 ABC transporter YP_003003376.1 1180213 D 561229 CDS YP_003003377.1 251788656 8120298 1181133..1181903 1 NC_012912.1 PFAM: ABC-2 type transporter; KEGG: eca:ECA3324 ABC transporter integral membrane protein; ABC transporter 1181903 8120298 Dd1591_1025 Dickeya zeae Ech1591 ABC transporter YP_003003377.1 1181133 D 561229 CDS YP_003003378.1 251788657 8120299 complement(1181968..1182348) 1 NC_012912.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1182348 8120299 Dd1591_1026 Dickeya zeae Ech1591 aspartate alpha-decarboxylase YP_003003378.1 1181968 R 561229 CDS YP_003003379.1 251788658 8120300 complement(1182374..1183228) 1 NC_012912.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1183228 panC 8120300 panC Dickeya zeae Ech1591 pantoate--beta-alanine ligase YP_003003379.1 1182374 R 561229 CDS YP_003003380.1 251788659 8120301 complement(1183244..1184038) 1 NC_012912.1 KEGG: eca:ECA3321 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1184038 8120301 Dd1591_1028 Dickeya zeae Ech1591 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_003003380.1 1183244 R 561229 CDS YP_003003381.1 251788660 8120302 complement(1184210..1184698) 1 NC_012912.1 KEGG: eca:ECA3320 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1184698 8120302 Dd1591_1029 Dickeya zeae Ech1591 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_003003381.1 1184210 R 561229 CDS YP_003003382.1 251788661 8120304 complement(1186167..1187075) 1 NC_012912.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: eca:ECA3318 glutamyl-Q tRNA(Asp) synthetase; Glutamate--tRNA ligase 1187075 8120304 Dd1591_1031 Dickeya zeae Ech1591 Glutamate--tRNA ligase YP_003003382.1 1186167 R 561229 CDS YP_003003383.1 251788662 8120305 complement(1187168..1187623) 1 NC_012912.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: efe:EFER_0168 DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein; RNA polymerase-binding transcription factor 1187623 dksA 8120305 dksA Dickeya zeae Ech1591 RNA polymerase-binding transcription factor YP_003003383.1 1187168 R 561229 CDS YP_003003384.1 251788663 8120306 complement(1187792..1188511) 1 NC_012912.1 TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; KEGG: eca:ECA3316 sugar fermentation stimulation protein A; sugar fermentation stimulation protein 1188511 8120306 Dd1591_1033 Dickeya zeae Ech1591 sugar fermentation stimulation protein YP_003003384.1 1187792 R 561229 CDS YP_003003385.1 251788664 8120307 complement(1188524..1189057) 1 NC_012912.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: eca:ECA3315 2'-5' RNA ligase; 2'-5' RNA ligase 1189057 8120307 Dd1591_1034 Dickeya zeae Ech1591 2'-5' RNA ligase YP_003003385.1 1188524 R 561229 CDS YP_003003386.1 251788665 8120308 1189279..1191756 1 NC_012912.1 similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 1191756 8120308 Dd1591_1035 Dickeya zeae Ech1591 ATP-dependent RNA helicase HrpB YP_003003386.1 1189279 D 561229 CDS YP_003003387.1 251788666 8120309 1191860..1194361 1 NC_012912.1 bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b 1194361 mrcB 8120309 mrcB Dickeya zeae Ech1591 penicillin-binding protein 1b YP_003003387.1 1191860 D 561229 CDS YP_003003388.1 251788667 8120310 complement(1194537..1195817) 1 NC_012912.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1195817 8120310 Dd1591_1037 Dickeya zeae Ech1591 glutamate-1-semialdehyde aminotransferase YP_003003388.1 1194537 R 561229 CDS YP_003003389.1 251788668 8120311 1196122..1196466 1 NC_012912.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: spe:Spro_0783 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 1196466 8120311 Dd1591_1038 Dickeya zeae Ech1591 iron-sulfur cluster assembly accessory protein YP_003003389.1 1196122 D 561229 CDS YP_003003390.1 251788669 8120312 complement(1196616..1197434) 1 NC_012912.1 PFAM: periplasmic binding protein; KEGG: eca:ECA3304 vitamin B12-transporter protein BtuF; periplasmic binding protein 1197434 8120312 Dd1591_1039 Dickeya zeae Ech1591 periplasmic binding protein YP_003003390.1 1196616 R 561229 CDS YP_003003391.1 251788670 8120313 complement(1197486..1198187) 1 NC_012912.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1198187 8120313 Dd1591_1040 Dickeya zeae Ech1591 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_003003391.1 1197486 R 561229 CDS YP_003003392.1 251788671 8120314 1198399..1199916 1 NC_012912.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 1199916 dgt 8120314 dgt Dickeya zeae Ech1591 deoxyguanosinetriphosphate triphosphohydrolase YP_003003392.1 1198399 D 561229 CDS YP_003003393.1 251788672 8120315 1200081..1201529 1 NC_012912.1 protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 1201529 8120315 Dd1591_1042 Dickeya zeae Ech1591 serine endoprotease YP_003003393.1 1200081 D 561229 CDS YP_003003394.1 251788673 8120316 1201702..1202859 1 NC_012912.1 regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; carbohydrate diacid transcriptional activator CdaR 1202859 8120316 Dd1591_1043 Dickeya zeae Ech1591 carbohydrate diacid transcriptional activator CdaR YP_003003394.1 1201702 D 561229 CDS YP_003003395.1 251788674 8120317 1203187..1204197 1 NC_012912.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3299 sulfate-binding protein; sulfate ABC transporter periplasmic sulfate-binding protein 1204197 8120317 Dd1591_1044 Dickeya zeae Ech1591 sulfate ABC transporter periplasmic sulfate-binding protein YP_003003395.1 1203187 D 561229 CDS YP_003003396.1 251788675 8120318 1204294..1205106 1 NC_012912.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3298 sulfate ABC transporter permease protein; sulfate ABC transporter inner membrane subunit CysT 1205106 8120318 Dd1591_1045 Dickeya zeae Ech1591 sulfate ABC transporter inner membrane subunit CysT YP_003003396.1 1204294 D 561229 CDS YP_003003397.1 251788676 8120319 1205116..1206000 1 NC_012912.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3297 sulfate ABC transporter permease protein; sulfate ABC transporter inner membrane subunit CysW 1206000 8120319 Dd1591_1046 Dickeya zeae Ech1591 sulfate ABC transporter inner membrane subunit CysW YP_003003397.1 1205116 D 561229 CDS YP_003003398.1 251788677 8120320 1205990..1206982 1 NC_012912.1 KEGG: eca:ECA3296 sulphate ABC transporter ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase subunit 1206982 8120320 Dd1591_1047 Dickeya zeae Ech1591 sulfate ABC transporter ATPase subunit YP_003003398.1 1205990 D 561229 CDS YP_003003399.1 251788678 8120321 1207488..1208789 1 NC_012912.1 KEGG: baa:BA_0301 phosphotransferase system, EIIC; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 1208789 8120321 Dd1591_1048 Dickeya zeae Ech1591 PTS system lactose/cellobiose family transporter subunit IIC YP_003003399.1 1207488 D 561229 CDS YP_003003400.1 251788679 8120322 1208815..1211463 1 NC_012912.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein; alpha-L-rhamnosidase 1211463 8120322 Dd1591_1049 Dickeya zeae Ech1591 alpha-L-rhamnosidase YP_003003400.1 1208815 D 561229 CDS YP_003003401.1 251788680 8120323 1211491..1212435 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_2451 transcriptional regulator, AraC family; AraC family transcriptional regulator 1212435 8120323 Dd1591_1050 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003003401.1 1211491 D 561229 CDS YP_003003402.1 251788681 8120324 1212642..1213919 1 NC_012912.1 KEGG: asa:ASA_2994 sucrose porin; hypothetical protein 1213919 8120324 Dd1591_1051 Dickeya zeae Ech1591 hypothetical protein YP_003003402.1 1212642 D 561229 CDS YP_003003403.1 251788682 8120325 1213962..1214930 1 NC_012912.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ccv:CCV52592_0665 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase fold-3 domain-containing protein 1214930 8120325 Dd1591_1052 Dickeya zeae Ech1591 alpha/beta hydrolase fold-3 domain-containing protein YP_003003403.1 1213962 D 561229 CDS YP_003003404.1 251788683 8120326 1215101..1215406 1 NC_012912.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_4224 phosphotransferase system lactose/cellobiose-specific IIB subunit; phosphotransferase system lactose/cellobiose-specific IIB subunit 1215406 8120326 Dd1591_1053 Dickeya zeae Ech1591 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_003003404.1 1215101 D 561229 CDS YP_003003405.1 251788684 8120327 1215475..1215792 1 NC_012912.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: vsa:VSAL_I0707 phosphotransferase system (PTS) component IIA; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 1215792 8120327 Dd1591_1054 Dickeya zeae Ech1591 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_003003405.1 1215475 D 561229 CDS YP_003003406.1 251788685 8120332 1217098..1218513 1 NC_012912.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1218513 gltX 8120332 gltX Dickeya zeae Ech1591 glutamyl-tRNA synthetase YP_003003406.1 1217098 D 561229 CDS YP_003003407.1 251788686 8120333 complement(1218590..1219858) 1 NC_012912.1 KEGG: pfl:PFL_0498 O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase; O-acetylhomoserine/O-acetylserine sulfhydrylase 1219858 8120333 Dd1591_1056 Dickeya zeae Ech1591 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_003003407.1 1218590 R 561229 CDS YP_003003408.1 251788687 8120336 complement(1220449..1221135) 1 NC_012912.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1221135 8120336 Dd1591_1057 Dickeya zeae Ech1591 uracil-DNA glycosylase YP_003003408.1 1220449 R 561229 CDS YP_003003409.1 251788688 8120337 1221557..1221940 1 NC_012912.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 1221940 8120337 Dd1591_1058 Dickeya zeae Ech1591 autonomous glycyl radical cofactor GrcA YP_003003409.1 1221557 D 561229 CDS YP_003003410.1 251788689 8120338 complement(1222064..1223416) 1 NC_012912.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 1223416 8120338 Dd1591_1059 Dickeya zeae Ech1591 ATP-dependent RNA helicase SrmB YP_003003410.1 1222064 R 561229 CDS YP_003003411.1 251788690 8120339 1223516..1224313 1 NC_012912.1 PFAM: methyltransferase small; KEGG: eca:ECA3286 hypothetical protein; methyltransferase small 1224313 8120339 Dd1591_1060 Dickeya zeae Ech1591 methyltransferase small YP_003003411.1 1223516 D 561229 CDS YP_003003412.1 251788691 8120340 complement(1224408..1226012) 1 NC_012912.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: eca:ECA3285 L-aspartate oxidase; L-aspartate oxidase 1226012 8120340 Dd1591_1061 Dickeya zeae Ech1591 L-aspartate oxidase YP_003003412.1 1224408 R 561229 CDS YP_003003413.1 251788692 8120341 1226365..1226940 1 NC_012912.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1226940 8120341 Dd1591_1062 Dickeya zeae Ech1591 RNA polymerase sigma factor RpoE YP_003003413.1 1226365 D 561229 CDS YP_003003414.1 251788693 8120342 1226990..1227655 1 NC_012912.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: spe:Spro_3675 anti-RNA polymerase sigma factor SigE; anti-RNA polymerase sigma factor SigE 1227655 8120342 Dd1591_1063 Dickeya zeae Ech1591 anti-RNA polymerase sigma factor SigE YP_003003414.1 1226990 D 561229 CDS YP_003003415.1 251788694 8120343 1227655..1228605 1 NC_012912.1 PFAM: MucB/RseB family protein; KEGG: spe:Spro_3674 periplasmic negative regulator of sigmaE; sigma E regulatory protein, MucB/RseB 1228605 8120343 Dd1591_1064 Dickeya zeae Ech1591 sigma E regulatory protein, MucB/RseB YP_003003415.1 1227655 D 561229 CDS YP_003003416.1 251788695 8120344 1228602..1229072 1 NC_012912.1 involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 1229072 8120344 Dd1591_1065 Dickeya zeae Ech1591 SoxR reducing system protein RseC YP_003003416.1 1228602 D 561229 CDS YP_003003417.1 251788696 8120345 1229333..1231132 1 NC_012912.1 TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: eca:ECA3280 GTP-binding protein LepA; GTP-binding protein LepA 1231132 8120345 Dd1591_1066 Dickeya zeae Ech1591 GTP-binding protein LepA YP_003003417.1 1229333 D 561229 CDS YP_003003418.1 251788697 8120346 1231148..1232116 1 NC_012912.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 1232116 8120346 Dd1591_1067 Dickeya zeae Ech1591 signal peptidase I YP_003003418.1 1231148 D 561229 CDS YP_003003419.1 251788698 8120347 1232299..1232979 1 NC_012912.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1232979 rnc 8120347 rnc Dickeya zeae Ech1591 ribonuclease III YP_003003419.1 1232299 D 561229 CDS YP_003003420.1 251788699 8120348 1232976..1233881 1 NC_012912.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1233881 era 8120348 era Dickeya zeae Ech1591 GTP-binding protein Era YP_003003420.1 1232976 D 561229 CDS YP_003003421.1 251788700 8120349 1233893..1234627 1 NC_012912.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: eca:ECA3276 DNA repair protein RecO; DNA repair protein RecO 1234627 8120349 Dd1591_1070 Dickeya zeae Ech1591 DNA repair protein RecO YP_003003421.1 1233893 D 561229 CDS YP_003003422.1 251788701 8120350 1234699..1235430 1 NC_012912.1 KEGG: eca:ECA3275 pyridoxal phosphate biosynthetic protein PdxJ; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; pyridoxal phosphate biosynthetic protein PdxJ 1235430 8120350 Dd1591_1071 Dickeya zeae Ech1591 pyridoxal phosphate biosynthetic protein PdxJ YP_003003422.1 1234699 D 561229 CDS YP_003003423.1 251788702 8120351 1235430..1235810 1 NC_012912.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1235810 acpS 8120351 acpS Dickeya zeae Ech1591 4'-phosphopantetheinyl transferase YP_003003423.1 1235430 D 561229 CDS YP_003003424.1 251788703 8120352 complement(1235835..1236098) 1 NC_012912.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: esa:ESA_00697 hypothetical protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1236098 8120352 Dd1591_1073 Dickeya zeae Ech1591 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003003424.1 1235835 R 561229 CDS YP_003003425.1 251788704 8120353 1236459..1237235 1 NC_012912.1 in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein 1237235 8120353 Dd1591_1074 Dickeya zeae Ech1591 EAL domain-containing protein YP_003003425.1 1236459 D 561229 CDS YP_003003426.1 251788705 8118227 1238015..1239532 1 NC_012912.1 KEGG: eca:ECA3270 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS/PAC and GAF sensors-containing diguanylate cyclase 1239532 8118227 Dd1591_1075 Dickeya zeae Ech1591 PAS/PAC and GAF sensors-containing diguanylate cyclase YP_003003426.1 1238015 D 561229 CDS YP_003003427.1 251788706 8118228 complement(1239550..1240374) 1 NC_012912.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: eca:ECA3269 HlyD family secretion protein; biotin/lipoyl attachment domain-containing protein 1240374 8118228 Dd1591_1076 Dickeya zeae Ech1591 biotin/lipoyl attachment domain-containing protein YP_003003427.1 1239550 R 561229 CDS YP_003003428.1 251788707 8118229 complement(1240361..1242541) 1 NC_012912.1 KEGG: eca:ECA3268 putative toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 1242541 8118229 Dd1591_1077 Dickeya zeae Ech1591 type I secretion system ATPase YP_003003428.1 1240361 R 561229 CDS YP_003003429.1 251788708 8118230 1243122..1243463 1 NC_012912.1 KEGG: eca:ECA3265 hypothetical protein; hypothetical protein 1243463 8118230 Dd1591_1078 Dickeya zeae Ech1591 hypothetical protein YP_003003429.1 1243122 D 561229 CDS YP_003003430.1 251788709 8118231 1243589..1244530 1 NC_012912.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 1244530 murQ 8118231 murQ Dickeya zeae Ech1591 N-acetylmuramic acid-6-phosphate etherase YP_003003430.1 1243589 D 561229 CDS YP_003003431.1 251788710 8118232 1244530..1245036 1 NC_012912.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: eca:ECA3260 tRNA-specific adenosine deaminase; CMP/dCMP deaminase zinc-binding 1245036 8118232 Dd1591_1080 Dickeya zeae Ech1591 CMP/dCMP deaminase zinc-binding YP_003003431.1 1244530 D 561229 CDS YP_003003432.1 251788711 8118233 complement(1245047..1246504) 1 NC_012912.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 1246504 8118233 Dd1591_1081 Dickeya zeae Ech1591 putative transglycosylase YP_003003432.1 1245047 R 561229 CDS YP_003003433.1 251788712 8118234 1246779..1250666 1 NC_012912.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1250666 8118234 Dd1591_1082 Dickeya zeae Ech1591 phosphoribosylformylglycinamidine synthase YP_003003433.1 1246779 D 561229 CDS YP_003003434.1 251788713 8118235 1251368..1252801 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA3257 two-component system sensor kinase; histidine kinase 1252801 8118235 Dd1591_1083 Dickeya zeae Ech1591 histidine kinase YP_003003434.1 1251368 D 561229 CDS YP_003003435.1 251788714 8118236 1252804..1253589 1 NC_012912.1 KEGG: eca:ECA3256 hypothetical protein; hypothetical protein 1253589 8118236 Dd1591_1084 Dickeya zeae Ech1591 hypothetical protein YP_003003435.1 1252804 D 561229 CDS YP_003003436.1 251788715 8118237 1253586..1254923 1 NC_012912.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: eca:ECA3255 two-component system response regulator; putative two component, sigma54 specific, transcriptional regulator, Fis family 1254923 8118237 Dd1591_1085 Dickeya zeae Ech1591 putative two component, sigma54 specific, transcriptional regulator, Fis family YP_003003436.1 1253586 D 561229 CDS YP_003003437.1 251788716 8118238 1255009..1255347 1 NC_012912.1 PFAM: nitrogen regulatory protein P-II; KEGG: eca:ECA3254 nitrogen regulatory protein P-II 1; nitrogen regulatory protein P-II 1255347 8118238 Dd1591_1086 Dickeya zeae Ech1591 nitrogen regulatory protein P-II YP_003003437.1 1255009 D 561229 CDS YP_003003438.1 251788717 8118239 complement(1255416..1256516) 1 NC_012912.1 PFAM: Pectinesterase; KEGG: eca:ECA3253 pectinesterase A; pectinesterase 1256516 8118239 Dd1591_1087 Dickeya zeae Ech1591 pectinesterase YP_003003438.1 1255416 R 561229 CDS YP_003003439.1 251788718 8118240 complement(1256599..1258254) 1 NC_012912.1 KEGG: eca:ECA3252 pectin acetylesterase; pectin acetylesterase 1258254 8118240 Dd1591_1088 Dickeya zeae Ech1591 pectin acetylesterase YP_003003439.1 1256599 R 561229 CDS YP_003003440.1 251788719 8118241 complement(1258332..1259489) 1 NC_012912.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xcb:XC_3590 pectate lyase; pectate lyase/Amb allergen 1259489 8118241 Dd1591_1089 Dickeya zeae Ech1591 pectate lyase/Amb allergen YP_003003440.1 1258332 R 561229 CDS YP_003003441.1 251788720 8118242 complement(1259965..1261182) 1 NC_012912.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xca:xccb100_3711 exported pectate lyase; pectate lyase/Amb allergen 1261182 8118242 Dd1591_1090 Dickeya zeae Ech1591 pectate lyase/Amb allergen YP_003003441.1 1259965 R 561229 CDS YP_003003442.1 251788721 8118243 complement(1261648..1262826) 1 NC_012912.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xcc:XCC0645 pectate lyase; pectate lyase/Amb allergen 1262826 8118243 Dd1591_1091 Dickeya zeae Ech1591 pectate lyase/Amb allergen YP_003003442.1 1261648 R 561229 CDS YP_003003443.1 251788722 8118244 complement(1263309..1264496) 1 NC_012912.1 PFAM: globin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: eca:ECA3251 nitric oxide dioxygenase; globin 1264496 8118244 Dd1591_1092 Dickeya zeae Ech1591 globin YP_003003443.1 1263309 R 561229 CDS YP_003003444.1 251788723 8118245 1264831..1266084 1 NC_012912.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1266084 glyA 8118245 glyA Dickeya zeae Ech1591 serine hydroxymethyltransferase YP_003003444.1 1264831 D 561229 CDS YP_003003445.1 251788724 8118246 1266220..1267413 1 NC_012912.1 putative transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; putative 3-phenylpropionic acid transporter 1267413 8118246 Dd1591_1094 Dickeya zeae Ech1591 putative 3-phenylpropionic acid transporter YP_003003445.1 1266220 D 561229 CDS YP_003003446.1 251788725 8118247 1267413..1268075 1 NC_012912.1 PFAM: protein of unknown function DUF1007; KEGG: eca:ECA3248 hypothetical protein; hypothetical protein 1268075 8118247 Dd1591_1095 Dickeya zeae Ech1591 hypothetical protein YP_003003446.1 1267413 D 561229 CDS YP_003003447.1 251788726 8118248 1268066..1269103 1 NC_012912.1 PFAM: high-affinity nickel-transporter; KEGG: eca:ECA3247 hypothetical protein; high-affinity nickel-transporter 1269103 8118248 Dd1591_1096 Dickeya zeae Ech1591 high-affinity nickel-transporter YP_003003447.1 1268066 D 561229 CDS YP_003003448.1 251788727 8118249 1269431..1270552 1 NC_012912.1 PFAM: periplasmic binding protein; KEGG: eca:ECA3246 putative periplasmic substrate-binding transport protein; periplasmic binding protein 1270552 8118249 Dd1591_1097 Dickeya zeae Ech1591 periplasmic binding protein YP_003003448.1 1269431 D 561229 CDS YP_003003449.1 251788728 8118250 complement(1270662..1271453) 1 NC_012912.1 PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: eca:ECA3243 putative ferric-enterobactin ABC transporter ATP-binding protein; ABC transporter 1271453 8118250 Dd1591_1098 Dickeya zeae Ech1591 ABC transporter YP_003003449.1 1270662 R 561229 CDS YP_003003450.1 251788729 8118251 complement(1271450..1272532) 1 NC_012912.1 PFAM: transport system permease protein; KEGG: eca:ECA3242 ABC transporter permease; transport system permease protein 1272532 8118251 Dd1591_1099 Dickeya zeae Ech1591 transport system permease protein YP_003003450.1 1271450 R 561229 CDS YP_003003451.1 251788730 8118252 complement(1272536..1273660) 1 NC_012912.1 KEGG: eca:ECA3241 ABC transporter, substrate binding protein; ABC transporter substrate-binding protein 1273660 8118252 Dd1591_1100 Dickeya zeae Ech1591 ABC transporter substrate-binding protein YP_003003451.1 1272536 R 561229 CDS YP_003003452.1 251788731 8118253 complement(1273820..1274623) 1 NC_012912.1 PFAM: inositol monophosphatase; KEGG: eca:ECA3240 inositol monophosphatase; inositol monophosphatase 1274623 8118253 Dd1591_1101 Dickeya zeae Ech1591 inositol monophosphatase YP_003003452.1 1273820 R 561229 CDS YP_003003453.1 251788732 8118254 1274751..1275500 1 NC_012912.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: eca:ECA3239 putative RNA methyltransferase; RNA methyltransferase, TrmH family, group 1 1275500 8118254 Dd1591_1102 Dickeya zeae Ech1591 RNA methyltransferase, TrmH family, group 1 YP_003003453.1 1274751 D 561229 CDS YP_003003454.1 251788733 8118255 1275626..1276120 1 NC_012912.1 regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR 1276120 8118255 Dd1591_1103 Dickeya zeae Ech1591 DNA-binding transcriptional regulator IscR YP_003003454.1 1275626 D 561229 CDS YP_003003455.1 251788734 8118256 1276179..1277393 1 NC_012912.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 1277393 8118256 Dd1591_1104 Dickeya zeae Ech1591 cysteine desulfurase YP_003003455.1 1276179 D 561229 CDS YP_003003456.1 251788735 8118257 1277418..1277804 1 NC_012912.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: eca:ECA3236 scaffold protein; FeS cluster assembly scaffold IscU 1277804 8118257 Dd1591_1105 Dickeya zeae Ech1591 FeS cluster assembly scaffold IscU YP_003003456.1 1277418 D 561229 CDS YP_003003457.1 251788736 8118258 1277833..1278156 1 NC_012912.1 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein 1278156 iscA 8118258 iscA Dickeya zeae Ech1591 iron-sulfur cluster assembly protein YP_003003457.1 1277833 D 561229 CDS YP_003003458.1 251788737 8118259 1278254..1278772 1 NC_012912.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 1278772 hscB 8118259 hscB Dickeya zeae Ech1591 co-chaperone HscB YP_003003458.1 1278254 D 561229 CDS YP_003003459.1 251788738 8118260 1278847..1280697 1 NC_012912.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1280697 hscA 8118260 hscA Dickeya zeae Ech1591 chaperone protein HscA YP_003003459.1 1278847 D 561229 CDS YP_003003460.1 251788739 8118261 1280699..1281034 1 NC_012912.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: cko:CKO_00256 hypothetical protein; ferredoxin, 2Fe-2S type, ISC system 1281034 8118261 Dd1591_1109 Dickeya zeae Ech1591 ferredoxin, 2Fe-2S type, ISC system YP_003003460.1 1280699 D 561229 CDS YP_003003461.1 251788740 8118262 1281046..1281246 1 NC_012912.1 TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: stm:STM2537 hypothetical protein; FeS assembly protein IscX 1281246 8118262 Dd1591_1110 Dickeya zeae Ech1591 FeS assembly protein IscX YP_003003461.1 1281046 D 561229 CDS YP_003003462.1 251788741 8118263 1281347..1282642 1 NC_012912.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 1282642 8118263 Dd1591_1111 Dickeya zeae Ech1591 aminopeptidase B YP_003003462.1 1281347 D 561229 CDS YP_003003463.1 251788742 8118264 1282737..1283531 1 NC_012912.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 1283531 8118264 Dd1591_1112 Dickeya zeae Ech1591 enhanced serine sensitivity protein SseB YP_003003463.1 1282737 D 561229 CDS YP_003003464.1 251788743 8118265 complement(1283917..1284771) 1 NC_012912.1 catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; 3-mercaptopyruvate sulfurtransferase 1284771 sseA 8118265 sseA Dickeya zeae Ech1591 3-mercaptopyruvate sulfurtransferase YP_003003464.1 1283917 R 561229 CDS YP_003003465.1 251788744 8118266 1285178..1285609 1 NC_012912.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1285609 ndk 8118266 ndk Dickeya zeae Ech1591 nucleoside diphosphate kinase YP_003003465.1 1285178 D 561229 CDS YP_003003466.1 251788745 8118267 1285778..1286956 1 NC_012912.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1286956 8118267 Dd1591_1115 Dickeya zeae Ech1591 ribosomal RNA large subunit methyltransferase N YP_003003466.1 1285778 D 561229 CDS YP_003003467.1 251788746 8118268 1287159..1287914 1 NC_012912.1 KEGG: eca:ECA3222 hypothetical protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1287914 8118268 Dd1591_1116 Dickeya zeae Ech1591 type IV pilus biogenesis/stability protein PilW YP_003003467.1 1287159 D 561229 CDS YP_003003468.1 251788747 8118269 1287904..1288887 1 NC_012912.1 SMART: helix-turn-helix domain protein; KEGG: eca:ECA3221 hypothetical protein; cytoskeletal protein RodZ 1288887 8118269 Dd1591_1117 Dickeya zeae Ech1591 cytoskeletal protein RodZ YP_003003468.1 1287904 D 561229 CDS YP_003003469.1 251788748 8118270 1288924..1290045 1 NC_012912.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1290045 ispG 8118270 ispG Dickeya zeae Ech1591 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_003003469.1 1288924 D 561229 CDS YP_003003470.1 251788749 8118271 1290198..1291472 1 NC_012912.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1291472 hisS 8118271 hisS Dickeya zeae Ech1591 histidyl-tRNA synthetase YP_003003470.1 1290198 D 561229 CDS YP_003003471.1 251788750 8118272 1291486..1292106 1 NC_012912.1 KEGG: eca:ECA3218 hypothetical protein; hypothetical protein 1292106 8118272 Dd1591_1120 Dickeya zeae Ech1591 hypothetical protein YP_003003471.1 1291486 D 561229 CDS YP_003003472.1 251788751 8118273 1292117..1293298 1 NC_012912.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 1293298 8118273 Dd1591_1121 Dickeya zeae Ech1591 outer membrane protein assembly complex subunit YfgL YP_003003472.1 1292117 D 561229 CDS YP_003003473.1 251788752 8118274 1293439..1294932 1 NC_012912.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1294932 engA 8118274 engA Dickeya zeae Ech1591 GTP-binding protein EngA YP_003003473.1 1293439 D 561229 CDS YP_003003474.1 251788753 8118275 1295022..1295300 1 NC_012912.1 PFAM: protein of unknown function DUF1407; KEGG: spe:Spro_3603 hypothetical protein; hypothetical protein 1295300 8118275 Dd1591_1123 Dickeya zeae Ech1591 hypothetical protein YP_003003474.1 1295022 D 561229 CDS YP_003003475.1 251788754 8118276 complement(1295304..1295672) 1 NC_012912.1 KEGG: eca:ECA3212 hypothetical protein; hypothetical protein 1295672 8118276 Dd1591_1124 Dickeya zeae Ech1591 hypothetical protein YP_003003475.1 1295304 R 561229 CDS YP_003003476.1 251788755 8118277 complement(1295653..1296702) 1 NC_012912.1 PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: eca:ECA3211 extracellular metalloprotease; peptidase M4 thermolysin 1296702 8118277 Dd1591_1125 Dickeya zeae Ech1591 peptidase M4 thermolysin YP_003003476.1 1295653 R 561229 CDS YP_003003477.1 251788756 8118278 complement(1296792..1298177) 1 NC_012912.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1298177 xseA 8118278 xseA Dickeya zeae Ech1591 exodeoxyribonuclease VII large subunit YP_003003477.1 1296792 R 561229 CDS YP_003003478.1 251788757 8118279 1298349..1299812 1 NC_012912.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1299812 8118279 Dd1591_1127 Dickeya zeae Ech1591 inosine 5'-monophosphate dehydrogenase YP_003003478.1 1298349 D 561229 CDS YP_003003479.1 251788758 8118280 1299900..1301477 1 NC_012912.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; KEGG: eca:ECA3208 bifunctional GMP synthase/glutamine amidotransferase protein; GMP synthase, large subunit 1301477 8118280 Dd1591_1128 Dickeya zeae Ech1591 GMP synthase, large subunit YP_003003479.1 1299900 D 561229 CDS YP_003003480.1 251788759 8118281 complement(1301537..1301668) 1 NC_012912.1 hypothetical protein 1301668 8118281 Dd1591_1129 Dickeya zeae Ech1591 hypothetical protein YP_003003480.1 1301537 R 561229 CDS YP_003003481.1 251788760 8118282 1301778..1303034 1 NC_012912.1 PFAM: integrase family protein; KEGG: bam:Bamb_2021 phage integrase family protein; integrase family protein 1303034 8118282 Dd1591_1130 Dickeya zeae Ech1591 integrase family protein YP_003003481.1 1301778 D 561229 CDS YP_003003482.1 251788761 8118283 1303102..1303371 1 NC_012912.1 KEGG: dia:Dtpsy_1263 hypothetical protein; hypothetical protein 1303371 8118283 Dd1591_1131 Dickeya zeae Ech1591 hypothetical protein YP_003003482.1 1303102 D 561229 CDS YP_003003483.1 251788762 8118284 1303374..1303898 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: rme:Rmet_1467 prophage CP4-57 regulatory; phage transcriptional regulator AlpA 1303898 8118284 Dd1591_1132 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003003483.1 1303374 D 561229 CDS YP_003003484.1 251788763 8118285 complement(1303911..1304300) 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: rme:Rmet_1468 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 1304300 8118285 Dd1591_1133 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003003484.1 1303911 R 561229 CDS YP_003003485.1 251788764 8118286 1304665..1305174 1 NC_012912.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: shn:Shewana3_1252 DNA repair protein RadC; DNA repair protein RadC 1305174 8118286 Dd1591_1134 Dickeya zeae Ech1591 DNA repair protein RadC YP_003003485.1 1304665 D 561229 CDS YP_003003486.1 251788765 8118287 1305765..1306076 1 NC_012912.1 PFAM: protein of unknown function DUF736; KEGG: pna:Pnap_4161 hypothetical protein; hypothetical protein 1306076 8118287 Dd1591_1135 Dickeya zeae Ech1591 hypothetical protein YP_003003486.1 1305765 D 561229 CDS YP_003003487.1 251788766 8118288 complement(1306446..1307081) 1 NC_012912.1 KEGG: bvi:Bcep1808_0258 hypothetical protein; hypothetical protein 1307081 8118288 Dd1591_1136 Dickeya zeae Ech1591 hypothetical protein YP_003003487.1 1306446 R 561229 CDS YP_003003488.1 251788767 8118289 complement(1307143..1308651) 1 NC_012912.1 KEGG: reu:Reut_A2939 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 1308651 8118289 Dd1591_1137 Dickeya zeae Ech1591 deoxyguanosinetriphosphate triphosphohydrolase YP_003003488.1 1307143 R 561229 CDS YP_003003489.1 251788768 8118290 1309096..1310118 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: spl:Spea_4213 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 1310118 8118290 Dd1591_1138 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003003489.1 1309096 D 561229 CDS YP_003003490.1 251788769 8118292 1310914..1311699 1 NC_012912.1 KEGG: bmj:BMULJ_00913 hypothetical protein; hypothetical protein 1311699 8118292 Dd1591_1140 Dickeya zeae Ech1591 hypothetical protein YP_003003490.1 1310914 D 561229 CDS YP_003003491.1 251788770 8118293 1311783..1312079 1 NC_012912.1 KEGG: pna:Pnap_4165 hypothetical protein; hypothetical protein 1312079 8118293 Dd1591_1141 Dickeya zeae Ech1591 hypothetical protein YP_003003491.1 1311783 D 561229 CDS YP_003003492.1 251788771 8118294 1312106..1312918 1 NC_012912.1 KEGG: pna:Pnap_4166 putative replication initiator and transcription repressor protein; putative replication initiator and transcription repressor protein 1312918 8118294 Dd1591_1142 Dickeya zeae Ech1591 putative replication initiator and transcription repressor protein YP_003003492.1 1312106 D 561229 CDS YP_003003493.1 251788772 8118296 1313904..1314635 1 NC_012912.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: aav:Aave_0730 putative conjugal transfer TrbJ signal peptide protein; conjugal transfer protein TrbJ 1314635 8118296 Dd1591_1144 Dickeya zeae Ech1591 conjugal transfer protein TrbJ YP_003003493.1 1313904 D 561229 CDS YP_003003494.1 251788773 8118297 1314635..1315798 1 NC_012912.1 TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: dac:Daci_2693 P-type conjugative transfer protein TrbL; P-type conjugative transfer protein TrbL 1315798 8118297 Dd1591_1145 Dickeya zeae Ech1591 P-type conjugative transfer protein TrbL YP_003003494.1 1314635 D 561229 CDS YP_003003495.1 251788774 8118298 1315801..1316505 1 NC_012912.1 PFAM: Conjugal transfer protein; KEGG: shn:Shewana3_1289 conjugal transfer protein; conjugal transfer protein TrbF 1316505 8118298 Dd1591_1146 Dickeya zeae Ech1591 conjugal transfer protein TrbF YP_003003495.1 1315801 D 561229 CDS YP_003003496.1 251788775 8118299 1316502..1317383 1 NC_012912.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pau:PA14_30860 TrbG-like protein; P-type conjugative transfer protein TrbG 1317383 8118299 Dd1591_1147 Dickeya zeae Ech1591 P-type conjugative transfer protein TrbG YP_003003496.1 1316502 D 561229 CDS YP_003003497.1 251788776 8118300 1317386..1318624 1 NC_012912.1 PFAM: conjugation TrbI family protein; KEGG: shn:Shewana3_1291 conjugation TrbI family protein; conjugation TrbI family protein 1318624 8118300 Dd1591_1148 Dickeya zeae Ech1591 conjugation TrbI family protein YP_003003497.1 1317386 D 561229 CDS YP_003003498.1 251788777 8118301 complement(1318670..1318981) 1 NC_012912.1 PFAM: plasmid stabilization system; KEGG: rle:pRL110045 hypothetical protein; plasmid stabilization system protein 1318981 8118301 Dd1591_1149 Dickeya zeae Ech1591 plasmid stabilization system protein YP_003003498.1 1318670 R 561229 CDS YP_003003499.1 251788778 8118302 complement(1318978..1319262) 1 NC_012912.1 KEGG: vch:VCA0504 RelB protein; RelB protein 1319262 8118302 Dd1591_1150 Dickeya zeae Ech1591 RelB protein YP_003003499.1 1318978 R 561229 CDS YP_003003500.1 251788779 8118304 complement(1319741..1320142) 1 NC_012912.1 PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA1665 DNA-binding protein Hns; histone family protein nucleoid-structuring protein H-NS 1320142 8118304 Dd1591_1152 Dickeya zeae Ech1591 histone family protein nucleoid-structuring protein H-NS YP_003003500.1 1319741 R 561229 CDS YP_003003501.1 251788780 8118306 complement(1320444..1320662) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu4299 hypothetical protein; XRE family transcriptional regulator 1320662 8118306 Dd1591_1154 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003501.1 1320444 R 561229 CDS YP_003003502.1 251788781 8118707 complement(1320755..1320985) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu4299 hypothetical protein; XRE family transcriptional regulator 1320985 8118707 Dd1591_1155 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003502.1 1320755 R 561229 CDS YP_003003503.1 251788782 8118708 1321088..1321333 1 NC_012912.1 KEGG: eca:ECA0513 putative phage transcriptional regulator; putative transcriptional regulator Nlp 1321333 8118708 Dd1591_1156 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003003503.1 1321088 D 561229 CDS YP_003003504.1 251788783 8118710 1321643..1321912 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA3392 hypothetical protein; hypothetical protein 1321912 8118710 Dd1591_1158 Dickeya zeae Ech1591 hypothetical protein YP_003003504.1 1321643 D 561229 CDS YP_003003505.1 251788784 8118711 complement(1322062..1322496) 1 NC_012912.1 KEGG: msu:MS0414 hypothetical protein; hypothetical protein 1322496 8118711 Dd1591_1159 Dickeya zeae Ech1591 hypothetical protein YP_003003505.1 1322062 R 561229 CDS YP_003003506.1 251788785 8118712 complement(1322501..1326772) 1 NC_012912.1 TIGRFAM: YD repeat protein; PFAM: PAAR repeat-containing protein; YD repeat-containing protein; KEGG: eca:ECA4278 rhs-family protein; YD repeat protein 1326772 8118712 Dd1591_1160 Dickeya zeae Ech1591 YD repeat protein YP_003003506.1 1322501 R 561229 CDS YP_003003507.1 251788786 8118713 complement(1326784..1327191) 1 NC_012912.1 PFAM: Domain of unknown function DUF1795; KEGG: eca:ECA2868 hypothetical protein; hypothetical protein 1327191 8118713 Dd1591_1161 Dickeya zeae Ech1591 hypothetical protein YP_003003507.1 1326784 R 561229 CDS YP_003003508.1 251788787 8118714 complement(1327205..1329058) 1 NC_012912.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 putative rhs accessory genetic element; type VI secretion system Vgr family protein 1329058 8118714 Dd1591_1162 Dickeya zeae Ech1591 type VI secretion system Vgr family protein YP_003003508.1 1327205 R 561229 CDS YP_003003509.1 251788788 8118715 complement(1329170..1329688) 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein; Hcp1 family type VI secretion system effector 1329688 8118715 Dd1591_1163 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003003509.1 1329170 R 561229 CDS YP_003003510.1 251788789 8118716 1330039..1330173 1 NC_012912.1 hypothetical protein 1330173 8118716 Dd1591_1164 Dickeya zeae Ech1591 hypothetical protein YP_003003510.1 1330039 D 561229 CDS YP_003003511.1 251788790 8118717 complement(1330477..1330650) 1 NC_012912.1 hypothetical protein 1330650 8118717 Dd1591_1165 Dickeya zeae Ech1591 hypothetical protein YP_003003511.1 1330477 R 561229 CDS YP_003003512.1 251788791 8118718 complement(1330818..1331465) 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: ara:Arad_0508 transcriptional regulator protein; TetR family transcriptional regulator 1331465 8118718 Dd1591_1166 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003003512.1 1330818 R 561229 CDS YP_003003513.1 251788792 8118719 1331724..1331819 1 NC_012912.1 hypothetical protein 1331819 8118719 Dd1591_1167 Dickeya zeae Ech1591 hypothetical protein YP_003003513.1 1331724 D 561229 CDS YP_003003514.1 251788793 8118720 1331836..1332729 1 NC_012912.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pfo:Pfl01_3057 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1332729 8118720 Dd1591_1168 Dickeya zeae Ech1591 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003003514.1 1331836 D 561229 CDS YP_003003515.1 251788794 8118721 1332815..1333192 1 NC_012912.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pfo:Pfl01_3056 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1333192 8118721 Dd1591_1169 Dickeya zeae Ech1591 antibiotic biosynthesis monooxygenase YP_003003515.1 1332815 D 561229 CDS YP_003003516.1 251788795 8118722 complement(1333387..1333773) 1 NC_012912.1 KEGG: eta:ETA_05100 hypothetical protein; hypothetical protein 1333773 8118722 Dd1591_1170 Dickeya zeae Ech1591 hypothetical protein YP_003003516.1 1333387 R 561229 CDS YP_003003517.1 251788796 8118723 complement(1333892..1334302) 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; transcriptional regulator PadR family protein; KEGG: xca:xccb100_2343 putative HTH-type transcriptional regulator; HxlR family transcriptional regulator 1334302 8118723 Dd1591_1171 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003003517.1 1333892 R 561229 CDS YP_003003518.1 251788797 8118724 1334392..1335252 1 NC_012912.1 PFAM: NmrA family protein; KEGG: xca:xccb100_2338 hypothetical protein; NmrA family protein 1335252 8118724 Dd1591_1172 Dickeya zeae Ech1591 NmrA family protein YP_003003518.1 1334392 D 561229 CDS YP_003003519.1 251788798 8118725 complement(1335396..1336031) 1 NC_012912.1 PFAM: carbonic anhydrase; KEGG: spe:Spro_0566 carbonate dehydratase; carbonate dehydratase 1336031 8118725 Dd1591_1173 Dickeya zeae Ech1591 carbonate dehydratase YP_003003519.1 1335396 R 561229 CDS YP_003003520.1 251788799 8118726 complement(1336170..1337129) 1 NC_012912.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: stt:t1257 putative pathogenicity island protein; hypothetical protein 1337129 8118726 Dd1591_1174 Dickeya zeae Ech1591 hypothetical protein YP_003003520.1 1336170 R 561229 CDS YP_003003521.1 251788800 8118727 complement(1337278..1338498) 1 NC_012912.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: kpe:KPK_4915 cyclopropane-fatty-acyl-phospholipid synthase family protein; Cyclopropane-fatty-acyl-phospholipid synthase 1338498 8118727 Dd1591_1175 Dickeya zeae Ech1591 Cyclopropane-fatty-acyl-phospholipid synthase YP_003003521.1 1337278 R 561229 CDS YP_003003522.1 251788801 8118728 complement(1338495..1339238) 1 NC_012912.1 PFAM: protein of unknown function DUF1365; KEGG: ent:Ent638_1488 hypothetical protein; hypothetical protein 1339238 8118728 Dd1591_1176 Dickeya zeae Ech1591 hypothetical protein YP_003003522.1 1338495 R 561229 CDS YP_003003523.1 251788802 8118729 complement(1339231..1340493) 1 NC_012912.1 PFAM: FAD dependent oxidoreductase; KEGG: ent:Ent638_1489 amine oxidase; FAD dependent oxidoreductase 1340493 8118729 Dd1591_1177 Dickeya zeae Ech1591 FAD dependent oxidoreductase YP_003003523.1 1339231 R 561229 CDS YP_003003524.1 251788803 8118730 complement(1340490..1341209) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ent:Ent638_1490 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1341209 8118730 Dd1591_1178 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003003524.1 1340490 R 561229 CDS YP_003003525.1 251788804 8118731 complement(1341206..1341640) 1 NC_012912.1 KEGG: kpe:KPK_4911 hypothetical protein; hypothetical protein 1341640 8118731 Dd1591_1179 Dickeya zeae Ech1591 hypothetical protein YP_003003525.1 1341206 R 561229 CDS YP_003003526.1 251788805 8118732 complement(1342056..1342784) 1 NC_012912.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ent:Ent638_0064 MerR family transcriptional regulator; MerR family transcriptional regulator 1342784 8118732 Dd1591_1180 Dickeya zeae Ech1591 MerR family transcriptional regulator YP_003003526.1 1342056 R 561229 CDS YP_003003527.1 251788806 8118733 1343032..1343811 1 NC_012912.1 KEGG: eca:ECA3203 hypothetical protein; hypothetical protein 1343811 8118733 Dd1591_1181 Dickeya zeae Ech1591 hypothetical protein YP_003003527.1 1343032 D 561229 CDS YP_003003528.1 251788807 8118734 1344093..1344812 1 NC_012912.1 PFAM: protein of unknown function DUF969; KEGG: esa:ESA_02631 hypothetical protein; hypothetical protein 1344812 8118734 Dd1591_1182 Dickeya zeae Ech1591 hypothetical protein YP_003003528.1 1344093 D 561229 CDS YP_003003529.1 251788808 8118735 1344809..1345795 1 NC_012912.1 PFAM: protein of unknown function DUF979; KEGG: esa:ESA_02630 hypothetical protein; hypothetical protein 1345795 8118735 Dd1591_1183 Dickeya zeae Ech1591 hypothetical protein YP_003003529.1 1344809 D 561229 CDS YP_003003530.1 251788809 8118736 1345848..1346867 1 NC_012912.1 KEGG: esa:ESA_02629 hypothetical protein; hypothetical protein 1346867 8118736 Dd1591_1184 Dickeya zeae Ech1591 hypothetical protein YP_003003530.1 1345848 D 561229 CDS YP_003003531.1 251788810 8118737 1347028..1347420 1 NC_012912.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA3501 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 1347420 8118737 Dd1591_1185 Dickeya zeae Ech1591 Glyoxalase/bleomycin resistance protein/dioxygenase YP_003003531.1 1347028 D 561229 CDS YP_003003532.1 251788811 8118738 complement(1347437..1348105) 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sec:SC1631 putative ABC-type transport system membrane spanning protein; polar amino acid ABC transporter permease 1348105 8118738 Dd1591_1186 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003532.1 1347437 R 561229 CDS YP_003003533.1 251788812 8118739 complement(1348107..1348832) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: see:SNSL254_A1751 ABC transporter ATP-binding subunit; ABC transporter 1348832 8118739 Dd1591_1187 Dickeya zeae Ech1591 ABC transporter YP_003003533.1 1348107 R 561229 CDS YP_003003534.1 251788813 8118740 complement(1348810..1349511) 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sea:SeAg_B1523 putative ABC transporter permease component; polar amino acid ABC transporter permease 1349511 8118740 Dd1591_1188 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003534.1 1348810 R 561229 CDS YP_003003535.1 251788814 8118741 complement(1349518..1350276) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: stt:t1536 putative periplasmic amino acid-binding protein; extracellular solute-binding protein family 3 1350276 8118741 Dd1591_1189 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003003535.1 1349518 R 561229 CDS YP_003003536.1 251788815 8118742 1351025..1351819 1 NC_012912.1 KEGG: eca:ECA3197 hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 1351819 8118742 Dd1591_1190 Dickeya zeae Ech1591 hydroxyethylthiazole kinase YP_003003536.1 1351025 D 561229 CDS YP_003003537.1 251788816 8118743 1351816..1352619 1 NC_012912.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 1352619 8118743 Dd1591_1191 Dickeya zeae Ech1591 phosphomethylpyrimidine kinase YP_003003537.1 1351816 D 561229 CDS YP_003003538.1 251788817 8118744 1353052..1353906 1 NC_012912.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eca:ECA1396 hypothetical protein; xylose isomerase domain-containing protein 1353906 8118744 Dd1591_1192 Dickeya zeae Ech1591 xylose isomerase domain-containing protein YP_003003538.1 1353052 D 561229 CDS YP_003003539.1 251788818 8118745 complement(1354150..1355130) 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: eca:ECA1397 LacI family transcriptional regulator; LacI family transcriptional regulator 1355130 8118745 Dd1591_1193 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003003539.1 1354150 R 561229 CDS YP_003003540.1 251788819 8118746 complement(1355254..1356408) 1 NC_012912.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: eca:ECA1398 putativeoxidoreductase; oxidoreductase domain-containing protein 1356408 8118746 Dd1591_1194 Dickeya zeae Ech1591 oxidoreductase domain-containing protein YP_003003540.1 1355254 R 561229 CDS YP_003003541.1 251788820 8118747 complement(1356405..1357475) 1 NC_012912.1 PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: eca:ECA1399 hypothetical protein; xylose isomerase domain-containing protein 1357475 8118747 Dd1591_1195 Dickeya zeae Ech1591 xylose isomerase domain-containing protein YP_003003541.1 1356405 R 561229 CDS YP_003003542.1 251788821 8118748 complement(1357497..1358744) 1 NC_012912.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: eca:ECA1400 putative nucleoside H+ symporter; nucleoside:H symporter 1358744 8118748 Dd1591_1196 Dickeya zeae Ech1591 nucleoside:H symporter YP_003003542.1 1357497 R 561229 CDS YP_003003543.1 251788822 8118749 complement(1358971..1359750) 1 NC_012912.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: spe:Spro_2394 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 1359750 8118749 Dd1591_1197 Dickeya zeae Ech1591 xylose isomerase domain-containing protein YP_003003543.1 1358971 R 561229 CDS YP_003003544.1 251788823 8118750 1360021..1360428 1 NC_012912.1 PFAM: phosphate-starvation-inducible E; KEGG: eca:ECA3195 phosphate-starvation-inducible protein PsiE; phosphate-starvation-inducible protein PsiE 1360428 8118750 Dd1591_1198 Dickeya zeae Ech1591 phosphate-starvation-inducible protein PsiE YP_003003544.1 1360021 D 561229 CDS YP_003003545.1 251788824 8118751 complement(1360614..1361990) 1 NC_012912.1 PFAM: peptidase U32; KEGG: eca:ECA3193 putative protease; peptidase U32 1361990 8118751 Dd1591_1199 Dickeya zeae Ech1591 peptidase U32 YP_003003545.1 1360614 R 561229 CDS YP_003003546.1 251788825 8118752 complement(1362159..1363121) 1 NC_012912.1 KEGG: eca:ECA3192 hypothetical protein; Glutathione transferase 1363121 8118752 Dd1591_1200 Dickeya zeae Ech1591 Glutathione transferase YP_003003546.1 1362159 R 561229 CDS YP_003003547.1 251788826 8118753 complement(1363255..1363986) 1 NC_012912.1 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR 1363986 8118753 Dd1591_1201 Dickeya zeae Ech1591 DNA-binding transcriptional regulator BaeR YP_003003547.1 1363255 R 561229 CDS YP_003003548.1 251788827 8118754 complement(1364000..1365358) 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA3188 signal transduction histidine-protein kinase BaeS; signal transduction histidine-protein kinase BaeS 1365358 8118754 Dd1591_1202 Dickeya zeae Ech1591 signal transduction histidine-protein kinase BaeS YP_003003548.1 1364000 R 561229 CDS YP_003003549.1 251788828 8118755 complement(1365367..1366770) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3187 multidrug efflux system protein MdtE; multidrug efflux system protein MdtE 1366770 8118755 Dd1591_1203 Dickeya zeae Ech1591 multidrug efflux system protein MdtE YP_003003549.1 1365367 R 561229 CDS YP_003003550.1 251788829 8118756 complement(1366865..1369954) 1 NC_012912.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC 1369954 8118756 Dd1591_1204 Dickeya zeae Ech1591 multidrug efflux system subunit MdtC YP_003003550.1 1366865 R 561229 CDS YP_003003551.1 251788830 8118757 complement(1369951..1373091) 1 NC_012912.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB 1373091 8118757 Dd1591_1205 Dickeya zeae Ech1591 multidrug efflux system subunit MdtB YP_003003551.1 1369951 R 561229 CDS YP_003003552.1 251788831 8118758 complement(1373091..1374350) 1 NC_012912.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA 1374350 8118758 Dd1591_1206 Dickeya zeae Ech1591 multidrug efflux system subunit MdtA YP_003003552.1 1373091 R 561229 CDS YP_003003553.1 251788832 8118759 complement(1374560..1375741) 1 NC_012912.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: spe:Spro_3416 nucleoside transporter; nucleoside transporter 1375741 8118759 Dd1591_1207 Dickeya zeae Ech1591 nucleoside transporter YP_003003553.1 1374560 R 561229 CDS YP_003003554.1 251788833 8118760 1376000..1376962 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3182 oxidoreductase; aldo/keto reductase 1376962 8118760 Dd1591_1208 Dickeya zeae Ech1591 aldo/keto reductase YP_003003554.1 1376000 D 561229 CDS YP_003003555.1 251788834 8118761 complement(1377443..1378510) 1 NC_012912.1 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein A 1378510 8118761 Dd1591_1209 Dickeya zeae Ech1591 outer membrane protein A YP_003003555.1 1377443 R 561229 CDS YP_003003556.1 251788835 8118762 complement(1378875..1379369) 1 NC_012912.1 PFAM: cell division inhibitor SulA; KEGG: eca:ECA1752 SOS cell division inhibitor; SOS cell division inhibitor 1379369 8118762 Dd1591_1210 Dickeya zeae Ech1591 SOS cell division inhibitor YP_003003556.1 1378875 R 561229 CDS YP_003003557.1 251788836 8118763 1379589..1380218 1 NC_012912.1 PFAM: TfoX domain protein; KEGG: eca:ECA1753 hypothetical protein; regulator of competence-specific genes 1380218 8118763 Dd1591_1211 Dickeya zeae Ech1591 regulator of competence-specific genes YP_003003557.1 1379589 D 561229 CDS YP_003003558.1 251788837 8118764 complement(1380215..1382410) 1 NC_012912.1 TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: eca:ECA1754 hypothetical protein; hypothetical protein 1382410 8118764 Dd1591_1212 Dickeya zeae Ech1591 hypothetical protein YP_003003558.1 1380215 R 561229 CDS YP_003003559.1 251788838 8118765 complement(1382429..1382875) 1 NC_012912.1 PFAM: protein of unknown function DUF307; KEGG: efe:EFER_1098 conserved hypothetical protein; putative inner membrane protein; hypothetical protein 1382875 8118765 Dd1591_1213 Dickeya zeae Ech1591 hypothetical protein YP_003003559.1 1382429 R 561229 CDS YP_003003560.1 251788839 8118766 1383029..1385086 1 NC_012912.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 1385086 helD 8118766 helD Dickeya zeae Ech1591 DNA helicase IV YP_003003560.1 1383029 D 561229 CDS YP_003003561.1 251788840 8118767 complement(1385166..1385624) 1 NC_012912.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1385624 mgsA 8118767 mgsA Dickeya zeae Ech1591 methylglyoxal synthase YP_003003561.1 1385166 R 561229 CDS YP_003003562.1 251788841 8118768 complement(1385752..1386399) 1 NC_012912.1 KEGG: spe:Spro_1761 hypothetical protein; hypothetical protein 1386399 8118768 Dd1591_1216 Dickeya zeae Ech1591 hypothetical protein YP_003003562.1 1385752 R 561229 CDS YP_003003563.1 251788842 8118769 1386648..1387061 1 NC_012912.1 PFAM: CoA-binding domain protein; KEGG: eca:ECA1759 putative CoA binding protein; CoA-binding domain-containing protein 1387061 8118769 Dd1591_1217 Dickeya zeae Ech1591 CoA-binding domain-containing protein YP_003003563.1 1386648 D 561229 CDS YP_003003564.1 251788843 8118770 complement(1387141..1387449) 1 NC_012912.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: eca:ECA1760 hypothetical protein; heat shock protein HspQ 1387449 8118770 Dd1591_1218 Dickeya zeae Ech1591 heat shock protein HspQ YP_003003564.1 1387141 R 561229 CDS YP_003003565.1 251788844 8118771 1387651..1387929 1 NC_012912.1 PFAM: acylphosphatase; KEGG: eca:ECA1761 putative acylphosphatase; acylphosphatase 1387929 8118771 Dd1591_1219 Dickeya zeae Ech1591 acylphosphatase YP_003003565.1 1387651 D 561229 CDS YP_003003566.1 251788845 8118772 complement(1387997..1388326) 1 NC_012912.1 TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: ypb:YPTS_1571 TusE/DsrC/DsvC family sulfur relay protein; TusE/DsrC/DsvC family sulfur relay protein 1388326 8118772 Dd1591_1220 Dickeya zeae Ech1591 TusE/DsrC/DsvC family sulfur relay protein YP_003003566.1 1387997 R 561229 CDS YP_003003567.1 251788846 8118773 complement(1388477..1389136) 1 NC_012912.1 PFAM: protein of unknown function UPF0005; KEGG: eca:ECA1763 hypothetical protein; hypothetical protein 1389136 8118773 Dd1591_1221 Dickeya zeae Ech1591 hypothetical protein YP_003003567.1 1388477 R 561229 CDS YP_003003568.1 251788847 8118775 complement(1390103..1390360) 1 NC_012912.1 hypothetical protein 1390360 8118775 Dd1591_1222 Dickeya zeae Ech1591 hypothetical protein YP_003003568.1 1390103 R 561229 CDS YP_003003569.1 251788848 8118776 complement(1390527..1390652) 1 NC_012912.1 hypothetical protein 1390652 8118776 Dd1591_1223 Dickeya zeae Ech1591 hypothetical protein YP_003003569.1 1390527 R 561229 CDS YP_003003570.1 251788849 8118777 complement(join(1390761..1391255,1391255..1391605)) 1 NC_012912.1 KEGG: plu:plu4519 IS427 family transposase; transposase and inactivated derivatives-like protein 1391605 8118777 Dd1591_1224 Dickeya zeae Ech1591 transposase and inactivated derivatives-like protein YP_003003570.1 1390761 R 561229 CDS YP_003003571.1 251788850 8118778 complement(1391748..1392905) 1 NC_012912.1 PFAM: acyltransferase 3; KEGG: bam:Bamb_3866 acyltransferase 3; acyltransferase 3 1392905 8118778 Dd1591_1225 Dickeya zeae Ech1591 acyltransferase 3 YP_003003571.1 1391748 R 561229 CDS YP_003003572.1 251788851 8118779 1393360..1393458 1 NC_012912.1 hypothetical protein 1393458 8118779 Dd1591_1226 Dickeya zeae Ech1591 hypothetical protein YP_003003572.1 1393360 D 561229 CDS YP_003003573.1 251788852 8118780 1393486..1393785 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: eci:UTI89_C4918 hypothetical protein; transposase IS3/IS911 family protein 1393785 8118780 Dd1591_1227 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003003573.1 1393486 D 561229 CDS YP_003003574.1 251788853 8118783 1394914..1395438 1 NC_012912.1 PFAM: isochorismatase hydrolase; KEGG: eca:ECA1767 isochorismatase family protein; isochorismatase hydrolase 1395438 8118783 Dd1591_1230 Dickeya zeae Ech1591 isochorismatase hydrolase YP_003003574.1 1394914 D 561229 CDS YP_003003575.1 251788854 8118784 complement(1395449..1395823) 1 NC_012912.1 KEGG: ent:Ent638_2008 putative cytoplasmic protein; putative cytoplasmic protein 1395823 8118784 Dd1591_1231 Dickeya zeae Ech1591 putative cytoplasmic protein YP_003003575.1 1395449 R 561229 CDS YP_003003576.1 251788855 8118785 1396030..1396461 1 NC_012912.1 PFAM: UspA domain protein; KEGG: eca:ECA1769 hypothetical protein; UspA domain-containing protein 1396461 8118785 Dd1591_1232 Dickeya zeae Ech1591 UspA domain-containing protein YP_003003576.1 1396030 D 561229 CDS YP_003003577.1 251788856 8118786 complement(1396510..1396776) 1 NC_012912.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: pmr:PMI2410 zinc-finger; hypothetical protein 1396776 8118786 Dd1591_1233 Dickeya zeae Ech1591 hypothetical protein YP_003003577.1 1396510 R 561229 CDS YP_003003578.1 251788857 8118628 complement(1397385..1398914) 1 NC_012912.1 PFAM: Ppx/GppA phosphatase; KEGG: eca:ECA3165 exopolyphosphatase; exopolyphosphatase 1398914 8118628 Dd1591_1235 Dickeya zeae Ech1591 exopolyphosphatase YP_003003578.1 1397385 R 561229 CDS YP_003003579.1 251788858 8118629 complement(1398919..1400988) 1 NC_012912.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1400988 8118629 Dd1591_1236 Dickeya zeae Ech1591 polyphosphate kinase YP_003003579.1 1398919 R 561229 CDS YP_003003580.1 251788859 8118630 1401211..1403442 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3163 phosphate ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1403442 8118630 Dd1591_1237 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003580.1 1401211 D 561229 CDS YP_003003581.1 251788860 8118631 1403439..1405085 1 NC_012912.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3162 phosphate ABC transporter permease protein; phosphate ABC transporter permease 1405085 8118631 Dd1591_1238 Dickeya zeae Ech1591 phosphate ABC transporter permease YP_003003581.1 1403439 D 561229 CDS YP_003003582.1 251788861 8118632 1405103..1405918 1 NC_012912.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1405918 8118632 Dd1591_1239 Dickeya zeae Ech1591 phosphate transporter ATP-binding protein YP_003003582.1 1405103 D 561229 CDS YP_003003583.1 251788862 8118633 1406115..1406540 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA3160 putative transcriptional regulator; helix-turn-helix domain-containing protein 1406540 8118633 Dd1591_1240 Dickeya zeae Ech1591 helix-turn-helix domain-containing protein YP_003003583.1 1406115 D 561229 CDS YP_003003584.1 251788863 8118634 complement(1406663..1408033) 1 NC_012912.1 KEGG: eca:ECA3159 L-serine dehydratase 2; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 1408033 8118634 Dd1591_1241 Dickeya zeae Ech1591 L-serine dehydratase 1 YP_003003584.1 1406663 R 561229 CDS YP_003003585.1 251788864 8118635 complement(1408098..1409381) 1 NC_012912.1 TIGRFAM: serine transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: eca:ECA3158 serine transporter; serine transporter 1409381 8118635 Dd1591_1242 Dickeya zeae Ech1591 serine transporter YP_003003585.1 1408098 R 561229 CDS YP_003003586.1 251788865 8118636 complement(1409977..1411047) 1 NC_012912.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1411047 8118636 Dd1591_1243 Dickeya zeae Ech1591 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_003003586.1 1409977 R 561229 CDS YP_003003587.1 251788866 8118637 complement(1411044..1411553) 1 NC_012912.1 KEGG: eca:ECA3156 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 1411553 8118637 Dd1591_1244 Dickeya zeae Ech1591 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_003003587.1 1411044 R 561229 CDS YP_003003588.1 251788867 8118638 complement(1411778..1412500) 1 NC_012912.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: spe:Spro_1164 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 1412500 8118638 Dd1591_1245 Dickeya zeae Ech1591 UDP-2,3-diacylglucosamine hydrolase YP_003003588.1 1411778 R 561229 CDS YP_003003589.1 251788868 8118639 complement(1412511..1413005) 1 NC_012912.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: yen:YE3049 peptidyl-prolyl cis-trans isomerase B (rotamase B); peptidyl-prolyl cis-trans isomerase B (rotamase B) 1413005 8118639 Dd1591_1246 Dickeya zeae Ech1591 peptidyl-prolyl cis-trans isomerase B (rotamase B) YP_003003589.1 1412511 R 561229 CDS YP_003003590.1 251788869 8118640 1413344..1413775 1 NC_012912.1 PFAM: DoxX family protein; KEGG: eca:ECA3152 hypothetical protein; DoxX family protein 1413775 8118640 Dd1591_1247 Dickeya zeae Ech1591 DoxX family protein YP_003003590.1 1413344 D 561229 CDS YP_003003591.1 251788870 8118641 1414061..1415446 1 NC_012912.1 KEGG: eca:ECA3151 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); cysteinyl-tRNA synthetase 1415446 8118641 Dd1591_1248 Dickeya zeae Ech1591 cysteinyl-tRNA synthetase YP_003003591.1 1414061 D 561229 CDS YP_003003592.1 251788871 8118642 complement(1415552..1415764) 1 NC_012912.1 KEGG: eca:ECA3150 hypothetical protein; hypothetical protein 1415764 8118642 Dd1591_1249 Dickeya zeae Ech1591 hypothetical protein YP_003003592.1 1415552 R 561229 CDS YP_003003593.1 251788872 8118643 complement(1415771..1416640) 1 NC_012912.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1416640 8118643 Dd1591_1250 Dickeya zeae Ech1591 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_003003593.1 1415771 R 561229 CDS YP_003003594.1 251788873 8118644 1417112..1419052 1 NC_012912.1 PFAM: Nitrate and nitrite sensing domain protein; chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA0434 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1419052 8118644 Dd1591_1251 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003594.1 1417112 D 561229 CDS YP_003003595.1 251788874 8118645 complement(1419064..1419864) 1 NC_012912.1 TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 1419864 8118645 Dd1591_1252 Dickeya zeae Ech1591 N-formylglutamate amidohydrolase YP_003003595.1 1419064 R 561229 CDS YP_003003596.1 251788875 8118646 complement(1419861..1421075) 1 NC_012912.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 1421075 8118646 Dd1591_1253 Dickeya zeae Ech1591 imidazolonepropionase YP_003003596.1 1419861 R 561229 CDS YP_003003597.1 251788876 8118647 1421323..1422687 1 NC_012912.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 1422687 8118647 Dd1591_1254 Dickeya zeae Ech1591 N-formimino-L-glutamate deiminase YP_003003597.1 1421323 D 561229 CDS YP_003003598.1 251788877 8118648 1422687..1423235 1 NC_012912.1 PFAM: protein of unknown function DUF886; KEGG: kpn:KPN_01285 hypothetical protein; hypothetical protein 1423235 8118648 Dd1591_1255 Dickeya zeae Ech1591 hypothetical protein YP_003003598.1 1422687 D 561229 CDS YP_003003599.1 251788878 8118649 1423448..1424305 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: kpe:KPK_3146 amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein family 3 1424305 8118649 Dd1591_1256 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003003599.1 1423448 D 561229 CDS YP_003003600.1 251788879 8118650 1424321..1425043 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_3145 amino acid ABC transporter, permease protein; polar amino acid ABC transporter permease 1425043 8118650 Dd1591_1257 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003600.1 1424321 D 561229 CDS YP_003003601.1 251788880 8118651 1425040..1425756 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_3144 amino acid ABC transporter, permease protein; polar amino acid ABC transporter permease 1425756 8118651 Dd1591_1258 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003601.1 1425040 D 561229 CDS YP_003003602.1 251788881 8118652 1425749..1426531 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpe:KPK_3143 amino acid ABC transporter, ATP-binding protein; ABC transporter 1426531 8118652 Dd1591_1259 Dickeya zeae Ech1591 ABC transporter YP_003003602.1 1425749 D 561229 CDS YP_003003603.1 251788882 8118653 1426544..1428115 1 NC_012912.1 KEGG: kpe:KPK_3142 putative histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 1428115 8118653 Dd1591_1260 Dickeya zeae Ech1591 histidine ammonia-lyase YP_003003603.1 1426544 D 561229 CDS YP_003003604.1 251788883 8118654 complement(1428098..1428841) 1 NC_012912.1 KEGG: yen:YE2460 GntR family transcriptional regulator; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1428841 8118654 Dd1591_1261 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003003604.1 1428098 R 561229 CDS YP_003003605.1 251788884 8118655 1429179..1429943 1 NC_012912.1 PFAM: protein of unknown function UPF0153; KEGG: pfo:Pfl01_4657 hypothetical protein; hypothetical protein 1429943 8118655 Dd1591_1262 Dickeya zeae Ech1591 hypothetical protein YP_003003605.1 1429179 D 561229 CDS YP_003003606.1 251788885 8118657 1430453..1432009 1 NC_012912.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1432009 8118657 Dd1591_1264 Dickeya zeae Ech1591 histidine ammonia-lyase YP_003003606.1 1430453 D 561229 CDS YP_003003607.1 251788886 8118658 1432023..1433714 1 NC_012912.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1433714 8118658 Dd1591_1265 Dickeya zeae Ech1591 urocanate hydratase YP_003003607.1 1432023 D 561229 CDS YP_003003608.1 251788887 8118659 complement(1434245..1434931) 1 NC_012912.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0921 GntR family transcriptional regulator; GntR family transcriptional regulator 1434931 8118659 Dd1591_1266 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003003608.1 1434245 R 561229 CDS YP_003003609.1 251788888 8118660 complement(1435069..1436541) 1 NC_012912.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0920 carbohydrate oxidoreductase; Fructuronate reductase 1436541 8118660 Dd1591_1267 Dickeya zeae Ech1591 Fructuronate reductase YP_003003609.1 1435069 R 561229 CDS YP_003003610.1 251788889 8118661 complement(1436545..1437966) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA0919 transport protein; major facilitator superfamily protein 1437966 8118661 Dd1591_1268 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003003610.1 1436545 R 561229 CDS YP_003003611.1 251788890 8118662 complement(1438488..1439510) 1 NC_012912.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eca:ECA0918 putative dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 1439510 8118662 Dd1591_1269 Dickeya zeae Ech1591 alcohol dehydrogenase GroES domain-containing protein YP_003003611.1 1438488 R 561229 CDS YP_003003612.1 251788891 8118663 complement(1439526..1440740) 1 NC_012912.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spe:Spro_3563 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 1440740 8118663 Dd1591_1270 Dickeya zeae Ech1591 mandelate racemase/muconate lactonizing protein YP_003003612.1 1439526 R 561229 CDS YP_003003613.1 251788892 8118664 1440929..1441141 1 NC_012912.1 hypothetical protein 1441141 8118664 Dd1591_1271 Dickeya zeae Ech1591 hypothetical protein YP_003003613.1 1440929 D 561229 CDS YP_003003614.1 251788893 8118665 1441141..1441509 1 NC_012912.1 KEGG: sme:SMc02038 glycerol dehydrogenase; hypothetical protein 1441509 8118665 Dd1591_1272 Dickeya zeae Ech1591 hypothetical protein YP_003003614.1 1441141 D 561229 CDS YP_003003615.1 251788894 8118666 complement(1441649..1442689) 1 NC_012912.1 PFAM: Pectate lyase; KEGG: eca:ECA1094 pectate lyase; pectate lyase 1442689 8118666 Dd1591_1273 Dickeya zeae Ech1591 pectate lyase YP_003003615.1 1441649 R 561229 CDS YP_003003616.1 251788895 8118667 complement(1443116..1444327) 1 NC_012912.1 KEGG: asa:ASA_3538 hypothetical protein; hypothetical protein 1444327 8118667 Dd1591_1274 Dickeya zeae Ech1591 hypothetical protein YP_003003616.1 1443116 R 561229 CDS YP_003003617.1 251788896 8118668 complement(1444800..1445909) 1 NC_012912.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ypb:YPTS_3224 ABC transporter related; ABC transporter 1445909 8118668 Dd1591_1275 Dickeya zeae Ech1591 ABC transporter YP_003003617.1 1444800 R 561229 CDS YP_003003618.1 251788897 8118669 1446268..1447521 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpe:KPK_4253 sugar ABC transporter, periplasmic sugar-binding protein; extracellular solute-binding protein family 1 1447521 8118669 Dd1591_1276 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003003618.1 1446268 D 561229 CDS YP_003003619.1 251788898 8118670 1447595..1448902 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_4252 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 1448902 8118670 Dd1591_1277 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003619.1 1447595 D 561229 CDS YP_003003620.1 251788899 8118671 1448910..1449809 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypg:YpAngola_A3885 ABC maltose/maltodextrin transporter, permease subunit; binding-protein-dependent transport systems inner membrane component 1449809 8118671 Dd1591_1278 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003003620.1 1448910 D 561229 CDS YP_003003621.1 251788900 8118672 1449815..1451014 1 NC_012912.1 PFAM: glycosyl hydrolase 53 domain protein; KEGG: ypg:YpAngola_A3886 glycosy hydrolase family protein; arabinogalactan endo-1,4-beta-galactosidase 1451014 8118672 Dd1591_1279 Dickeya zeae Ech1591 arabinogalactan endo-1,4-beta-galactosidase YP_003003621.1 1449815 D 561229 CDS YP_003003622.1 251788901 8118673 1451151..1453208 1 NC_012912.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: esa:ESA_03417 hypothetical protein; beta-galactosidase 1453208 8118673 Dd1591_1280 Dickeya zeae Ech1591 beta-galactosidase YP_003003622.1 1451151 D 561229 CDS YP_003003623.1 251788902 8118674 1453320..1453634 1 NC_012912.1 PFAM: phosphotransferase system PTS EIIB protein; KEGG: kpn:KPN_00432 putative phosphotransferase system PTS; phosphotransferase system PTS EIIB protein 1453634 8118674 Dd1591_1281 Dickeya zeae Ech1591 phosphotransferase system PTS EIIB protein YP_003003623.1 1453320 D 561229 CDS YP_003003624.1 251788903 8118675 complement(1453800..1455071) 1 NC_012912.1 porin involved in the transport of maltose and maltodextrins; maltoporin 1455071 8118675 Dd1591_1282 Dickeya zeae Ech1591 maltoporin YP_003003624.1 1453800 R 561229 CDS YP_003003625.1 251788904 8118676 1455339..1456412 1 NC_012912.1 transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor 1456412 lacI 8118676 lacI Dickeya zeae Ech1591 lac repressor YP_003003625.1 1455339 D 561229 CDS YP_003003626.1 251788905 8118677 complement(1456589..1456777) 1 NC_012912.1 KEGG: eca:ECA3166 hypothetical protein; hypothetical protein 1456777 8118677 Dd1591_1284 Dickeya zeae Ech1591 hypothetical protein YP_003003626.1 1456589 R 561229 CDS YP_003003627.1 251788906 8118678 complement(1457052..1458173) 1 NC_012912.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: yen:YE3022 hypothetical protein; Cupin 4 family protein 1458173 8118678 Dd1591_1285 Dickeya zeae Ech1591 Cupin 4 family protein YP_003003627.1 1457052 R 561229 CDS YP_003003628.1 251788907 8118679 complement(1458403..1458732) 1 NC_012912.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: yen:YE3423 transcription regulator ArsR; ArsR family transcriptional regulator 1458732 8118679 Dd1591_1286 Dickeya zeae Ech1591 ArsR family transcriptional regulator YP_003003628.1 1458403 R 561229 CDS YP_003003629.1 251788908 8118680 complement(1458944..1459867) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mms:mma_0767 LysR family transcriptional regulator; LysR family transcriptional regulator 1459867 8118680 Dd1591_1287 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003629.1 1458944 R 561229 CDS YP_003003630.1 251788909 8118681 1460254..1460766 1 NC_012912.1 KEGG: eca:ECA0249 hypothetical protein; hypothetical protein 1460766 8118681 Dd1591_1288 Dickeya zeae Ech1591 hypothetical protein YP_003003630.1 1460254 D 561229 CDS YP_003003631.1 251788910 8118682 1460824..1462011 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: eca:ECA0250 putative oxidoreductase; Pyridoxal 4-dehydrogenase 1462011 8118682 Dd1591_1289 Dickeya zeae Ech1591 Pyridoxal 4-dehydrogenase YP_003003631.1 1460824 D 561229 CDS YP_003003632.1 251788911 8118683 complement(1462072..1463547) 1 NC_012912.1 KEGG: eca:ECA2840 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1463547 8118683 Dd1591_1290 Dickeya zeae Ech1591 diguanylate cyclase YP_003003632.1 1462072 R 561229 CDS YP_003003633.1 251788912 8118684 1464279..1465334 1 NC_012912.1 KEGG: bja:bll2387 hypothetical protein; hypothetical protein 1465334 8118684 Dd1591_1291 Dickeya zeae Ech1591 hypothetical protein YP_003003633.1 1464279 D 561229 CDS YP_003003634.1 251788913 8118685 1465396..1465536 1 NC_012912.1 hypothetical protein 1465536 8118685 Dd1591_1292 Dickeya zeae Ech1591 hypothetical protein YP_003003634.1 1465396 D 561229 CDS YP_003003635.1 251788914 8118687 1465992..1468436 1 NC_012912.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eca:ECA3118 putative mechanosensitive ion channel protein; MscS Mechanosensitive ion channel 1468436 8118687 Dd1591_1293 Dickeya zeae Ech1591 MscS Mechanosensitive ion channel YP_003003635.1 1465992 D 561229 CDS YP_003003636.1 251788915 8118688 complement(1468526..1469386) 1 NC_012912.1 PFAM: aminotransferase class IV; KEGG: eca:ECA3117 D-alanine aminotransferase; D-amino-acid transaminase 1469386 8118688 Dd1591_1294 Dickeya zeae Ech1591 D-amino-acid transaminase YP_003003636.1 1468526 R 561229 CDS YP_003003637.1 251788916 8118689 1469841..1471064 1 NC_012912.1 PFAM: aminotransferase class I and II; KEGG: eca:ECA3115 aminotransferase; aminotransferase 1471064 8118689 Dd1591_1295 Dickeya zeae Ech1591 aminotransferase YP_003003637.1 1469841 D 561229 CDS YP_003003638.1 251788917 8118690 1471219..1471620 1 NC_012912.1 TIGRFAM: lipoprotein, PulS/OutS family; KEGG: eca:ECA3114 general secretion pathway lipoprotein; lipoprotein, PulS/OutS family 1471620 8118690 Dd1591_1296 Dickeya zeae Ech1591 lipoprotein, PulS/OutS family YP_003003638.1 1471219 D 561229 CDS YP_003003639.1 251788918 8118691 complement(1471655..1472284) 1 NC_012912.1 KEGG: eca:ECA3113 general secretion pathway protein; general secretion pathway protein 1472284 8118691 Dd1591_1297 Dickeya zeae Ech1591 general secretion pathway protein YP_003003639.1 1471655 R 561229 CDS YP_003003640.1 251788919 8118692 1473340..1474158 1 NC_012912.1 TIGRFAM: general secretion pathway protein C; KEGG: eca:ECA3110 general secretion pathway protein C; general secretion pathway protein C 1474158 8118692 Dd1591_1298 Dickeya zeae Ech1591 general secretion pathway protein C YP_003003640.1 1473340 D 561229 CDS YP_003003641.1 251788920 8118693 1474160..1476310 1 NC_012912.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: kpn:KPN_00160 pullulanase D protein; general secretion pathway protein D 1476310 8118693 Dd1591_1299 Dickeya zeae Ech1591 general secretion pathway protein D YP_003003641.1 1474160 D 561229 CDS YP_003003642.1 251788921 8118694 1476307..1477803 1 NC_012912.1 KEGG: eca:ECA3108 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 1477803 8118694 Dd1591_1300 Dickeya zeae Ech1591 general secretory pathway protein E YP_003003642.1 1476307 D 561229 CDS YP_003003643.1 251788922 8118695 1477805..1479031 1 NC_012912.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: eca:ECA3107 general secretion pathway protein F; general secretion pathway protein F 1479031 8118695 Dd1591_1301 Dickeya zeae Ech1591 general secretion pathway protein F YP_003003643.1 1477805 D 561229 CDS YP_003003644.1 251788923 8118696 1479065..1479526 1 NC_012912.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G; general secretion pathway protein G 1479526 8118696 Dd1591_1302 Dickeya zeae Ech1591 general secretion pathway protein G YP_003003644.1 1479065 D 561229 CDS YP_003003645.1 251788924 8118697 1479529..1480068 1 NC_012912.1 TIGRFAM: general secretion pathway protein H; KEGG: eca:ECA3105 general secretion pathway protein H; general secretion pathway protein H 1480068 8118697 Dd1591_1303 Dickeya zeae Ech1591 general secretion pathway protein H YP_003003645.1 1479529 D 561229 CDS YP_003003646.1 251788925 8118698 1480072..1480449 1 NC_012912.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: eca:ECA3104 general secretion pathway protein I; general secretion pathway protein I 1480449 8118698 Dd1591_1304 Dickeya zeae Ech1591 general secretion pathway protein I YP_003003646.1 1480072 D 561229 CDS YP_003003647.1 251788926 8118699 1480446..1481186 1 NC_012912.1 TIGRFAM: general secretion pathway protein J; KEGG: eca:ECA3103 general secretion pathway protein J; general secretion pathway protein J 1481186 8118699 Dd1591_1305 Dickeya zeae Ech1591 general secretion pathway protein J YP_003003647.1 1480446 D 561229 CDS YP_003003648.1 251788927 8118700 1481183..1482253 1 NC_012912.1 PFAM: General secretion pathway protein K; KEGG: eca:ECA3102 general secretion pathway protein K; general secretion pathway protein K 1482253 8118700 Dd1591_1306 Dickeya zeae Ech1591 general secretion pathway protein K YP_003003648.1 1481183 D 561229 CDS YP_003003649.1 251788928 8118701 1482250..1483452 1 NC_012912.1 TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: eca:ECA3101 general secretion pathway protein L; general secretion pathway protein L 1483452 8118701 Dd1591_1307 Dickeya zeae Ech1591 general secretion pathway protein L YP_003003649.1 1482250 D 561229 CDS YP_003003650.1 251788929 8118702 1483449..1483937 1 NC_012912.1 PFAM: General secretion pathway M protein; KEGG: eca:ECA3100 general secretion pathway protein M; general secretion pathway M protein 1483937 8118702 Dd1591_1308 Dickeya zeae Ech1591 general secretion pathway M protein YP_003003650.1 1483449 D 561229 CDS YP_003003651.1 251788930 8118703 1484122..1484973 1 NC_012912.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: eca:ECA3098 type 4 prepilin-like proteins leader peptide processing enzyme; Prepilin peptidase 1484973 8118703 Dd1591_1309 Dickeya zeae Ech1591 Prepilin peptidase YP_003003651.1 1484122 D 561229 CDS YP_003003652.1 251788931 8118704 1485426..1485650 1 NC_012912.1 hypothetical protein 1485650 8118704 Dd1591_1310 Dickeya zeae Ech1591 hypothetical protein YP_003003652.1 1485426 D 561229 CDS YP_003003653.1 251788932 8118705 1485893..1486465 1 NC_012912.1 PFAM: protein of unknown function DUF1234; KEGG: eca:ECA3091 hypothetical protein; hypothetical protein 1486465 8118705 Dd1591_1311 Dickeya zeae Ech1591 hypothetical protein YP_003003653.1 1485893 D 561229 CDS YP_003003654.1 251788933 8118706 1486544..1486879 1 NC_012912.1 KEGG: eca:ECA3326 hypothetical protein; hypothetical protein 1486879 8118706 Dd1591_1312 Dickeya zeae Ech1591 hypothetical protein YP_003003654.1 1486544 D 561229 CDS YP_003003655.1 251788934 8118387 1486893..1487951 1 NC_012912.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: esa:ESA_01712 hypothetical protein; NADH:flavin oxidoreductase/NADH oxidase 1487951 8118387 Dd1591_1313 Dickeya zeae Ech1591 NADH:flavin oxidoreductase/NADH oxidase YP_003003655.1 1486893 D 561229 CDS YP_003003656.1 251788935 8118388 complement(1488359..1488775) 1 NC_012912.1 PFAM: thioesterase superfamily protein; KEGG: eca:ECA1857 hypothetical protein; thioesterase superfamily protein 1488775 8118388 Dd1591_1314 Dickeya zeae Ech1591 thioesterase superfamily protein YP_003003656.1 1488359 R 561229 CDS YP_003003657.1 251788936 8118389 complement(1488815..1489573) 1 NC_012912.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase 1489573 8118389 Dd1591_1315 Dickeya zeae Ech1591 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_003003657.1 1488815 R 561229 CDS YP_003003658.1 251788937 8118390 complement(1489570..1490445) 1 NC_012912.1 PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: spe:Spro_3419 isochorismatase; Isochorismatase 1490445 8118390 Dd1591_1316 Dickeya zeae Ech1591 Isochorismatase YP_003003658.1 1489570 R 561229 CDS YP_003003659.1 251788938 8118391 complement(1490449..1492077) 1 NC_012912.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E 1492077 entE 8118391 entE Dickeya zeae Ech1591 enterobactin synthase subunit E YP_003003659.1 1490449 R 561229 CDS YP_003003660.1 251788939 8118392 complement(1492074..1493261) 1 NC_012912.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: spe:Spro_3421 isochorismate synthase; isochorismate synthase 1493261 8118392 Dd1591_1318 Dickeya zeae Ech1591 isochorismate synthase YP_003003660.1 1492074 R 561229 CDS YP_003003661.1 251788940 8118393 complement(1493346..1495568) 1 NC_012912.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ent:Ent638_1079 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 1495568 8118393 Dd1591_1319 Dickeya zeae Ech1591 TonB-dependent siderophore receptor YP_003003661.1 1493346 R 561229 CDS YP_003003662.1 251788941 8118394 1495882..1497174 1 NC_012912.1 PFAM: putative esterase; KEGG: yen:YE3622 enterobactin/ferric enterobactin esterase; enterobactin/ferric enterobactin esterase 1497174 8118394 Dd1591_1320 Dickeya zeae Ech1591 enterobactin/ferric enterobactin esterase YP_003003662.1 1495882 D 561229 CDS YP_003003663.1 251788942 8118395 1497209..1497427 1 NC_012912.1 PFAM: MbtH domain protein; KEGG: cvi:CV_2232 MbtH-like protein; MbtH domain-containing protein 1497427 8118395 Dd1591_1321 Dickeya zeae Ech1591 MbtH domain-containing protein YP_003003663.1 1497209 D 561229 CDS YP_003003664.1 251788943 8118396 1497482..1506115 1 NC_012912.1 TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: cvi:CV_2233 synthetase CbsF; amino acid adenylation domain-containing protein 1506115 8118396 Dd1591_1322 Dickeya zeae Ech1591 amino acid adenylation domain-containing protein YP_003003664.1 1497482 D 561229 CDS YP_003003665.1 251788944 8118397 1506200..1506451 1 NC_012912.1 hypothetical protein 1506451 8118397 Dd1591_1323 Dickeya zeae Ech1591 hypothetical protein YP_003003665.1 1506200 D 561229 CDS YP_003003666.1 251788945 8118398 complement(1506538..1507335) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3621 iron-siderophore transport system, ATP-binding component; ABC transporter 1507335 8118398 Dd1591_1324 Dickeya zeae Ech1591 ABC transporter YP_003003666.1 1506538 R 561229 CDS YP_003003667.1 251788946 8118399 complement(1507373..1508407) 1 NC_012912.1 PFAM: transport system permease protein; KEGG: yen:YE3620 iron-enterobactin transporter permease; transport system permease protein 1508407 8118399 Dd1591_1325 Dickeya zeae Ech1591 transport system permease protein YP_003003667.1 1507373 R 561229 CDS YP_003003668.1 251788947 8118400 complement(1508420..1509496) 1 NC_012912.1 PFAM: transport system permease protein; KEGG: yen:YE3619 iron-enterobactin transporter membrane protein; transport system permease protein 1509496 8118400 Dd1591_1326 Dickeya zeae Ech1591 transport system permease protein YP_003003668.1 1508420 R 561229 CDS YP_003003669.1 251788948 8118401 1509709..1510983 1 NC_012912.1 protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS 1510983 8118401 Dd1591_1327 Dickeya zeae Ech1591 enterobactin exporter EntS YP_003003669.1 1509709 D 561229 CDS YP_003003670.1 251788949 8118402 complement(1511019..1512065) 1 NC_012912.1 with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 1512065 8118402 Dd1591_1328 Dickeya zeae Ech1591 iron-enterobactin transporter periplasmic binding protein YP_003003670.1 1511019 R 561229 CDS YP_003003671.1 251788950 8118403 1512111..1512206 1 NC_012912.1 hypothetical protein 1512206 8118403 Dd1591_1329 Dickeya zeae Ech1591 hypothetical protein YP_003003671.1 1512111 D 561229 CDS YP_003003672.1 251788951 8118404 1512479..1514335 1 NC_012912.1 KEGG: eca:ECA0931 putative avirulence protein; putative avirulence protein 1514335 8118404 Dd1591_1330 Dickeya zeae Ech1591 putative avirulence protein YP_003003672.1 1512479 D 561229 CDS YP_003003673.1 251788952 8118405 1514467..1516359 1 NC_012912.1 KEGG: eca:ECA0931 putative avirulence protein; putative avirulence protein 1516359 8118405 Dd1591_1331 Dickeya zeae Ech1591 putative avirulence protein YP_003003673.1 1514467 D 561229 CDS YP_003003674.1 251788953 8118406 complement(1516519..1517328) 1 NC_012912.1 TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); KEGG: spe:Spro_1456 5'-nucleotidase; 5'-nucleotidase, lipoprotein e(P4) family protein 1517328 8118406 Dd1591_1332 Dickeya zeae Ech1591 5'-nucleotidase, lipoprotein e(P4) family protein YP_003003674.1 1516519 R 561229 CDS YP_003003675.1 251788954 8118407 1518108..1518899 1 NC_012912.1 PFAM: Necrosis inducing; KEGG: eca:ECA3087 hypothetical protein; Necrosis inducing 1518899 8118407 Dd1591_1333 Dickeya zeae Ech1591 Necrosis inducing YP_003003675.1 1518108 D 561229 CDS YP_003003676.1 251788955 8118408 complement(1519626..1520399) 1 NC_012912.1 KEGG: sfl:SF1773 putative acetyltransferase; putative acetyltransferase 1520399 8118408 Dd1591_1334 Dickeya zeae Ech1591 putative acetyltransferase YP_003003676.1 1519626 R 561229 CDS YP_003003677.1 251788956 8118411 1521448..1522209 1 NC_012912.1 PFAM: VacJ family lipoprotein; KEGG: eca:ECA3083 lipoprotein; VacJ family lipoprotein 1522209 8118411 Dd1591_1336 Dickeya zeae Ech1591 VacJ family lipoprotein YP_003003677.1 1521448 D 561229 CDS YP_003003678.1 251788957 8118412 1522611..1524182 1 NC_012912.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1524182 8118412 Dd1591_1337 Dickeya zeae Ech1591 malate:quinone oxidoreductase YP_003003678.1 1522611 D 561229 CDS YP_003003679.1 251788958 8118413 complement(1524270..1525523) 1 NC_012912.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: eca:ECA3081 long-chain fatty acid outer membrane transporter; long-chain fatty acid outer membrane transporter 1525523 8118413 Dd1591_1338 Dickeya zeae Ech1591 long-chain fatty acid outer membrane transporter YP_003003679.1 1524270 R 561229 CDS YP_003003680.1 251788959 8118414 1525907..1526203 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA3080 hypothetical protein; hypothetical protein 1526203 8118414 Dd1591_1339 Dickeya zeae Ech1591 hypothetical protein YP_003003680.1 1525907 D 561229 CDS YP_003003681.1 251788960 8118415 1526474..1527793 1 NC_012912.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 1527793 fadI 8118415 fadI Dickeya zeae Ech1591 3-ketoacyl-CoA thiolase YP_003003681.1 1526474 D 561229 CDS YP_003003682.1 251788961 8118416 1527790..1529988 1 NC_012912.1 TIGRFAM: fatty acid oxidation complex, alpha subunit FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: eca:ECA3078 multifunctional fatty acid oxidation complex subunit alpha; fatty acid oxidation complex subunit alpha FadJ 1529988 8118416 Dd1591_1341 Dickeya zeae Ech1591 fatty acid oxidation complex subunit alpha FadJ YP_003003682.1 1527790 D 561229 CDS YP_003003683.1 251788962 8118417 1530893..1531378 1 NC_012912.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: eca:ECA3072 phosphohistidine phosphatase; phosphohistidine phosphatase, SixA 1531378 8118417 Dd1591_1342 Dickeya zeae Ech1591 phosphohistidine phosphatase, SixA YP_003003683.1 1530893 D 561229 CDS YP_003003684.1 251788963 8118418 complement(1531461..1532006) 1 NC_012912.1 PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: eca:ECA3071 hypothetical protein; hypothetical protein 1532006 8118418 Dd1591_1343 Dickeya zeae Ech1591 hypothetical protein YP_003003684.1 1531461 R 561229 CDS YP_003003685.1 251788964 8118419 1532238..1533170 1 NC_012912.1 KEGG: yen:YE1280 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; modification methylase, HemK family 1533170 8118419 Dd1591_1344 Dickeya zeae Ech1591 modification methylase, HemK family YP_003003685.1 1532238 D 561229 CDS YP_003003686.1 251788965 8118420 1533243..1534328 1 NC_012912.1 KEGG: eca:ECA3069 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1534328 8118420 Dd1591_1345 Dickeya zeae Ech1591 chorismate synthase YP_003003686.1 1533243 D 561229 CDS YP_003003687.1 251788966 8118421 1534417..1535226 1 NC_012912.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 1535226 mepA 8118421 mepA Dickeya zeae Ech1591 penicillin-insensitive murein endopeptidase YP_003003687.1 1534417 D 561229 CDS YP_003003688.1 251788967 8118422 1535230..1536030 1 NC_012912.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA3067 hypothetical protein; hypothetical protein 1536030 8118422 Dd1591_1347 Dickeya zeae Ech1591 hypothetical protein YP_003003688.1 1535230 D 561229 CDS YP_003003689.1 251788968 8118423 1536030..1536593 1 NC_012912.1 PFAM: protein of unknown function DUF462; KEGG: stm:STM2381 putative cytoplasmic protein; hypothetical protein 1536593 8118423 Dd1591_1348 Dickeya zeae Ech1591 hypothetical protein YP_003003689.1 1536030 D 561229 CDS YP_003003690.1 251788969 8118424 1536628..1536906 1 NC_012912.1 PFAM: YfcL protein; KEGG: eca:ECA3065 hypothetical protein; YfcL protein 1536906 8118424 Dd1591_1349 Dickeya zeae Ech1591 YfcL protein YP_003003690.1 1536628 D 561229 CDS YP_003003691.1 251788970 8118425 complement(1536955..1537866) 1 NC_012912.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA3561 LysR family transcriptional regulator; LysR family transcriptional regulator 1537866 8118425 Dd1591_1350 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003691.1 1536955 R 561229 CDS YP_003003692.1 251788971 8118426 1538056..1539474 1 NC_012912.1 PFAM: Aldehyde Dehydrogenase; KEGG: eca:ECA3562 coniferyl aldehyde dehydrogenase; aldehyde dehydrogenase 1539474 8118426 Dd1591_1351 Dickeya zeae Ech1591 aldehyde dehydrogenase YP_003003692.1 1538056 D 561229 CDS YP_003003693.1 251788972 8118427 1539567..1540244 1 NC_012912.1 PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA3563 hypothetical protein; ThiJ/PfpI domain-containing protein 1540244 8118427 Dd1591_1352 Dickeya zeae Ech1591 ThiJ/PfpI domain-containing protein YP_003003693.1 1539567 D 561229 CDS YP_003003694.1 251788973 8118428 1540270..1540899 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: eca:ECA1072 glutathione S-transferase; Glutathione S-transferase domain-containing protein 1540899 8118428 Dd1591_1353 Dickeya zeae Ech1591 Glutathione S-transferase domain-containing protein YP_003003694.1 1540270 D 561229 CDS YP_003003695.1 251788974 8118429 1540969..1541394 1 NC_012912.1 PFAM: OsmC family protein; KEGG: bav:BAV2446 organic hydroperoxide resistance protein; OsmC family protein 1541394 8118429 Dd1591_1354 Dickeya zeae Ech1591 OsmC family protein YP_003003695.1 1540969 D 561229 CDS YP_003003696.1 251788975 8118430 complement(1541459..1541776) 1 NC_012912.1 PFAM: branched-chain amino acid transport; KEGG: cvi:CV_0704 hypothetical protein; branched-chain amino acid transport 1541776 8118430 Dd1591_1355 Dickeya zeae Ech1591 branched-chain amino acid transport YP_003003696.1 1541459 R 561229 CDS YP_003003697.1 251788976 8118431 complement(1541773..1542513) 1 NC_012912.1 PFAM: AzlC family protein; KEGG: bxe:Bxe_B2443 branched-chain amino acid exporter, LIV-E family; AzlC family protein 1542513 8118431 Dd1591_1356 Dickeya zeae Ech1591 AzlC family protein YP_003003697.1 1541773 R 561229 CDS YP_003003698.1 251788977 8118432 complement(1542603..1543436) 1 NC_012912.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2442 AraC family transcriptional regulator; AraC family transcriptional regulator 1543436 8118432 Dd1591_1357 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003003698.1 1542603 R 561229 CDS YP_003003699.1 251788978 8118433 complement(1543776..1545794) 1 NC_012912.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 1545794 mnmC 8118433 mnmC Dickeya zeae Ech1591 5-methylaminomethyl-2-thiouridine methyltransferase YP_003003699.1 1543776 R 561229 CDS YP_003003700.1 251788979 8118434 1545953..1547173 1 NC_012912.1 PFAM: Beta-ketoacyl synthase; KEGG: kpn:KPN_02713 3-oxoacyl-(acyl carrier protein) synthase I; beta-ketoacyl synthase 1547173 8118434 Dd1591_1359 Dickeya zeae Ech1591 beta-ketoacyl synthase YP_003003700.1 1545953 D 561229 CDS YP_003003701.1 251788980 8118435 complement(1547631..1548842) 1 NC_012912.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator 1548842 flk 8118435 flk Dickeya zeae Ech1591 flagella biosynthesis regulator YP_003003701.1 1547631 R 561229 CDS YP_003003702.1 251788981 8118436 complement(1549105..1550622) 1 NC_012912.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: cko:CKO_04003 hypothetical protein; hypothetical protein 1550622 8118436 Dd1591_1361 Dickeya zeae Ech1591 hypothetical protein YP_003003702.1 1549105 R 561229 CDS YP_003003703.1 251788982 8118437 complement(1550638..1551066) 1 NC_012912.1 KEGG: spe:Spro_3343 tricarboxylic transport; tricarboxylic transport 1551066 8118437 Dd1591_1362 Dickeya zeae Ech1591 tricarboxylic transport YP_003003703.1 1550638 R 561229 CDS YP_003003704.1 251788983 8118438 complement(1551081..1552058) 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: stm:STM2786 tricarboxylic transport; hypothetical protein 1552058 8118438 Dd1591_1363 Dickeya zeae Ech1591 hypothetical protein YP_003003704.1 1551081 R 561229 CDS YP_003003705.1 251788984 8118439 1552261..1552935 1 NC_012912.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: spe:Spro_3340 two component transcriptional regulator; winged helix family two component transcriptional regulator 1552935 8118439 Dd1591_1364 Dickeya zeae Ech1591 winged helix family two component transcriptional regulator YP_003003705.1 1552261 D 561229 CDS YP_003003706.1 251788985 8118440 1552922..1554313 1 NC_012912.1 PFAM: Two-component sensor kinase domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_3339 integral membrane sensor signal transduction histidine kinase; histidine kinase 1554313 8118440 Dd1591_1365 Dickeya zeae Ech1591 histidine kinase YP_003003706.1 1552922 D 561229 CDS YP_003003707.1 251788986 8118441 1554455..1555588 1 NC_012912.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: esa:ESA_00896 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region 1555588 8118441 Dd1591_1366 Dickeya zeae Ech1591 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003003707.1 1554455 D 561229 CDS YP_003003708.1 251788987 8118442 1555674..1556684 1 NC_012912.1 PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; KEGG: eca:ECA3059 putative semialdehyde dehydrogenase; putative semialdehyde dehydrogenase 1556684 8118442 Dd1591_1367 Dickeya zeae Ech1591 putative semialdehyde dehydrogenase YP_003003708.1 1555674 D 561229 CDS YP_003003709.1 251788988 8118443 1556684..1557514 1 NC_012912.1 KEGG: eca:ECA3058 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A 1557514 8118443 Dd1591_1368 Dickeya zeae Ech1591 tRNA pseudouridine synthase A YP_003003709.1 1556684 D 561229 CDS YP_003003710.1 251788989 8118444 1557592..1558257 1 NC_012912.1 PFAM: SNARE associated Golgi protein; KEGG: eca:ECA3057 hypothetical protein; hypothetical protein 1558257 8118444 Dd1591_1369 Dickeya zeae Ech1591 hypothetical protein YP_003003710.1 1557592 D 561229 CDS YP_003003711.1 251788990 8118445 1558487..1559398 1 NC_012912.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1559398 8118445 Dd1591_1370 Dickeya zeae Ech1591 acetyl-CoA carboxylase subunit beta YP_003003711.1 1558487 D 561229 CDS YP_003003712.1 251788991 8118446 1559478..1560746 1 NC_012912.1 KEGG: eca:ECA3055 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1560746 8118446 Dd1591_1371 Dickeya zeae Ech1591 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_003003712.1 1559478 D 561229 CDS YP_003003713.1 251788992 8118447 1560736..1561593 1 NC_012912.1 PFAM: Sporulation domain protein; KEGG: eca:ECA3054 hypothetical protein; Sporulation domain-containing protein 1561593 8118447 Dd1591_1372 Dickeya zeae Ech1591 Sporulation domain-containing protein YP_003003713.1 1560736 D 561229 CDS YP_003003714.1 251788993 8118448 1561866..1562357 1 NC_012912.1 membrane protein required for colicin V production; colicin V production protein 1562357 8118448 Dd1591_1373 Dickeya zeae Ech1591 colicin V production protein YP_003003714.1 1561866 D 561229 CDS YP_003003715.1 251788994 8118449 1562388..1563905 1 NC_012912.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1563905 8118449 Dd1591_1374 Dickeya zeae Ech1591 amidophosphoribosyltransferase YP_003003715.1 1562388 D 561229 CDS YP_003003716.1 251788995 8118450 1564048..1564617 1 NC_012912.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: yen:YE1317 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1564617 8118450 Dd1591_1375 Dickeya zeae Ech1591 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_003003716.1 1564048 D 561229 CDS YP_003003717.1 251788996 8118451 1564997..1565776 1 NC_012912.1 KEGG: eca:ECA3050 histidine-binding periplasmic protein; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic binding protein 1565776 8118451 Dd1591_1376 Dickeya zeae Ech1591 cationic amino acid ABC transporter periplasmic binding protein YP_003003717.1 1564997 D 561229 CDS YP_003003718.1 251788997 8118452 1565844..1566533 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3049 histidine ABC transporter permease protein; polar amino acid ABC transporter permease 1566533 8118452 Dd1591_1377 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003718.1 1565844 D 561229 CDS YP_003003719.1 251788998 8118453 1566526..1567242 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3048 histidine ABC transporter permease protein; polar amino acid ABC transporter permease 1567242 8118453 Dd1591_1378 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003003719.1 1566526 D 561229 CDS YP_003003720.1 251788999 8118454 1567268..1568041 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3047 histidine/lysine/arginine/ornithine transporter subunit; histidine/lysine/arginine/ornithine transporter subunit 1568041 8118454 Dd1591_1379 Dickeya zeae Ech1591 histidine/lysine/arginine/ornithine transporter subunit YP_003003720.1 1567268 D 561229 CDS YP_003003721.1 251789000 8118455 complement(1568094..1569002) 1 NC_012912.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA3046 hypothetical protein; hypothetical protein 1569002 8118455 Dd1591_1380 Dickeya zeae Ech1591 hypothetical protein YP_003003721.1 1568094 R 561229 CDS YP_003003722.1 251789001 8118456 complement(1569270..1569899) 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: esa:ESA_00915 hypothetical protein; Glutathione S-transferase domain-containing protein 1569899 8118456 Dd1591_1381 Dickeya zeae Ech1591 Glutathione S-transferase domain-containing protein YP_003003722.1 1569270 R 561229 CDS YP_003003723.1 251789002 8118457 1570152..1570703 1 NC_012912.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: eca:ECA3043 phosphodiesterase; phosphodiesterase 1570703 8118457 Dd1591_1382 Dickeya zeae Ech1591 phosphodiesterase YP_003003723.1 1570152 D 561229 CDS YP_003003724.1 251789003 8118458 1570794..1571405 1 NC_012912.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA3042 putative NUDIX hydrolase; NUDIX hydrolase 1571405 8118458 Dd1591_1383 Dickeya zeae Ech1591 NUDIX hydrolase YP_003003724.1 1570794 D 561229 CDS YP_003003725.1 251789004 8118459 complement(1571506..1573647) 1 NC_012912.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 1573647 8118459 Dd1591_1384 Dickeya zeae Ech1591 phosphate acetyltransferase YP_003003725.1 1571506 R 561229 CDS YP_003003726.1 251789005 8118460 complement(1573738..1574940) 1 NC_012912.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1574940 8118460 Dd1591_1385 Dickeya zeae Ech1591 acetate kinase YP_003003726.1 1573738 R 561229 CDS YP_003003727.1 251789006 8118461 1575392..1575847 1 NC_012912.1 PFAM: protein of unknown function DUF412; KEGG: spe:Spro_3315 hypothetical protein; hypothetical protein 1575847 8118461 Dd1591_1386 Dickeya zeae Ech1591 hypothetical protein YP_003003727.1 1575392 D 561229 CDS YP_003003728.1 251789007 8118462 1575984..1576478 1 NC_012912.1 PFAM: YfbU family protein; KEGG: eca:ECA3037 hypothetical protein; hypothetical protein 1576478 8118462 Dd1591_1387 Dickeya zeae Ech1591 hypothetical protein YP_003003728.1 1575984 D 561229 CDS YP_003003729.1 251789008 8118463 1576520..1577176 1 NC_012912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA3036 putative phosphatase; putative phosphatase 1577176 8118463 Dd1591_1388 Dickeya zeae Ech1591 putative phosphatase YP_003003729.1 1576520 D 561229 CDS YP_003003730.1 251789009 8118464 1577321..1579156 1 NC_012912.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: eca:ECA3035 putative sodium/sulphate transporter; Citrate transporter 1579156 8118464 Dd1591_1389 Dickeya zeae Ech1591 Citrate transporter YP_003003730.1 1577321 D 561229 CDS YP_003003731.1 251789010 8118465 complement(1579219..1579818) 1 NC_012912.1 KEGG: eca:ECA3034 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; hypothetical protein 1579818 8118465 Dd1591_1390 Dickeya zeae Ech1591 hypothetical protein YP_003003731.1 1579219 R 561229 CDS YP_003003732.1 251789011 8118466 complement(1579966..1581180) 1 NC_012912.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 1581180 8118466 Dd1591_1391 Dickeya zeae Ech1591 aminotransferase AlaT YP_003003732.1 1579966 R 561229 CDS YP_003003733.1 251789012 8120434 1581939..1582076 1 NC_012912.1 hypothetical protein 1582076 8120434 Dd1591_1392 Dickeya zeae Ech1591 hypothetical protein YP_003003733.1 1581939 D 561229 CDS YP_003003734.1 251789013 8120435 1582518..1583447 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3032 LysR family transcriptional regulator; LysR family transcriptional regulator 1583447 8120435 Dd1591_1393 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003734.1 1582518 D 561229 CDS YP_003003735.1 251789014 8120436 1584097..1584540 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1584540 8120436 Dd1591_1394 Dickeya zeae Ech1591 NADH dehydrogenase subunit A YP_003003735.1 1584097 D 561229 CDS YP_003003736.1 251789015 8120437 1584559..1585233 1 NC_012912.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1585233 8120437 Dd1591_1395 Dickeya zeae Ech1591 NADH dehydrogenase subunit B YP_003003736.1 1584559 D 561229 CDS YP_003003737.1 251789016 8120438 1585351..1587150 1 NC_012912.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1587150 8120438 Dd1591_1396 Dickeya zeae Ech1591 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_003003737.1 1585351 D 561229 CDS YP_003003738.1 251789017 8120439 1587153..1587683 1 NC_012912.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: spe:Spro_3305 NADH dehydrogenase subunit E; NADH-quinone oxidoreductase subunit E 1587683 8120439 Dd1591_1397 Dickeya zeae Ech1591 NADH-quinone oxidoreductase subunit E YP_003003738.1 1587153 D 561229 CDS YP_003003739.1 251789018 8120440 1587680..1589029 1 NC_012912.1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1589029 8120440 Dd1591_1398 Dickeya zeae Ech1591 NADH dehydrogenase I subunit F YP_003003739.1 1587680 D 561229 CDS YP_003003740.1 251789019 8120441 1589144..1591870 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1591870 8120441 Dd1591_1399 Dickeya zeae Ech1591 NADH dehydrogenase subunit G YP_003003740.1 1589144 D 561229 CDS YP_003003741.1 251789020 8120442 1591867..1592841 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1592841 8120442 Dd1591_1400 Dickeya zeae Ech1591 NADH dehydrogenase subunit H YP_003003741.1 1591867 D 561229 CDS YP_003003742.1 251789021 8120443 1592858..1593400 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1593400 8120443 Dd1591_1401 Dickeya zeae Ech1591 NADH dehydrogenase subunit I YP_003003742.1 1592858 D 561229 CDS YP_003003743.1 251789022 8120444 1593411..1593962 1 NC_012912.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: eca:ECA3020 NADH dehydrogenase subunit J; NADH dehydrogenase (quinone) 1593962 8120444 Dd1591_1402 Dickeya zeae Ech1591 NADH dehydrogenase (quinone) YP_003003743.1 1593411 D 561229 CDS YP_003003744.1 251789023 8120445 1593959..1594261 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1594261 8120445 Dd1591_1403 Dickeya zeae Ech1591 NADH dehydrogenase subunit K YP_003003744.1 1593959 D 561229 CDS YP_003003745.1 251789024 8120446 1594258..1596108 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1596108 8120446 Dd1591_1404 Dickeya zeae Ech1591 NADH dehydrogenase subunit L YP_003003745.1 1594258 D 561229 CDS YP_003003746.1 251789025 8120447 1596142..1597740 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1597740 8120447 Dd1591_1405 Dickeya zeae Ech1591 NADH dehydrogenase subunit M YP_003003746.1 1596142 D 561229 CDS YP_003003747.1 251789026 8120448 1597747..1599204 1 NC_012912.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1599204 8120448 Dd1591_1406 Dickeya zeae Ech1591 NADH dehydrogenase subunit N YP_003003747.1 1597747 D 561229 CDS YP_003003748.1 251789027 8120449 1599614..1601806 1 NC_012912.1 PFAM: multicopper oxidase type 2; KEGG: xfn:XfasM23_2141 multicopper oxidase type 3; multicopper oxidase type 2 1601806 8120449 Dd1591_1407 Dickeya zeae Ech1591 multicopper oxidase type 2 YP_003003748.1 1599614 D 561229 CDS YP_003003749.1 251789028 8120450 complement(1602198..1603079) 1 NC_012912.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; proline racemase; KEGG: eca:ECA3011 hypothetical protein; phenazine biosynthesis protein PhzF family 1603079 8120450 Dd1591_1408 Dickeya zeae Ech1591 phenazine biosynthesis protein PhzF family YP_003003749.1 1602198 R 561229 CDS YP_003003750.1 251789029 8120451 1603293..1604885 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3010 ABC transporter ATP-binding protein; ABC transporter 1604885 8120451 Dd1591_1409 Dickeya zeae Ech1591 ABC transporter YP_003003750.1 1603293 D 561229 CDS YP_003003751.1 251789030 8120452 1605678..1606805 1 NC_012912.1 involved in hydrogen uptake; hydrogenase 2 small subunit 1606805 8120452 Dd1591_1410 Dickeya zeae Ech1591 hydrogenase 2 small subunit YP_003003751.1 1605678 D 561229 CDS YP_003003752.1 251789031 8120453 1606809..1607825 1 NC_012912.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA 1607825 8120453 Dd1591_1411 Dickeya zeae Ech1591 hydrogenase 2 protein HybA YP_003003752.1 1606809 D 561229 CDS YP_003003753.1 251789032 8120454 1607812..1609011 1 NC_012912.1 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; putative hydrogenase 2 b cytochrome subunit 1609011 8120454 Dd1591_1412 Dickeya zeae Ech1591 putative hydrogenase 2 b cytochrome subunit YP_003003753.1 1607812 D 561229 CDS YP_003003754.1 251789033 8120455 1608989..1610695 1 NC_012912.1 involved in hydrogen uptake; hydrogenase 2 large subunit 1610695 8120455 Dd1591_1413 Dickeya zeae Ech1591 hydrogenase 2 large subunit YP_003003754.1 1608989 D 561229 CDS YP_003003755.1 251789034 8120456 1610695..1611195 1 NC_012912.1 TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: yen:YE3605 hydrogenase 2 maturation endopeptidase; hydrogenase expression/formation protein 1611195 8120456 Dd1591_1414 Dickeya zeae Ech1591 hydrogenase expression/formation protein YP_003003755.1 1610695 D 561229 CDS YP_003003756.1 251789035 8120457 1611263..1611739 1 NC_012912.1 KEGG: yen:YE3604 hydrogenase 2-specific chaperone; hydrogenase 2-specific chaperone 1611739 8120457 Dd1591_1415 Dickeya zeae Ech1591 hydrogenase 2-specific chaperone YP_003003756.1 1611263 D 561229 CDS YP_003003757.1 251789036 8120458 1611744..1612088 1 NC_012912.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: yen:YE3603a hydrogenase nickel incorporation protein HybF; hydrogenase nickel insertion protein HypA 1612088 8120458 Dd1591_1416 Dickeya zeae Ech1591 hydrogenase nickel insertion protein HypA YP_003003757.1 1611744 D 561229 CDS YP_003003758.1 251789037 8120459 1612159..1613343 1 NC_012912.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: pmr:PMI0037 hydrogenase nickel incorporation protein; hydrogenase accessory protein HypB 1613343 8120459 Dd1591_1417 Dickeya zeae Ech1591 hydrogenase accessory protein HypB YP_003003758.1 1612159 D 561229 CDS YP_003003759.1 251789038 8120460 1613346..1613633 1 NC_012912.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: yen:YE3602A hydrogenase 2 accessory protein HypG; hydrogenase assembly chaperone HypC/HupF 1613633 8120460 Dd1591_1418 Dickeya zeae Ech1591 hydrogenase assembly chaperone HypC/HupF YP_003003759.1 1613346 D 561229 CDS YP_003003760.1 251789039 8120461 1613620..1614735 1 NC_012912.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: pmr:PMI0039 hydrogenase formation protein; hydrogenase expression/formation protein HypD 1614735 8120461 Dd1591_1419 Dickeya zeae Ech1591 hydrogenase expression/formation protein HypD YP_003003760.1 1613620 D 561229 CDS YP_003003761.1 251789040 8120462 1614735..1615763 1 NC_012912.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: pmr:PMI0040 hydrogenase formation protein; hydrogenase expression/formation protein HypE 1615763 8120462 Dd1591_1420 Dickeya zeae Ech1591 hydrogenase expression/formation protein HypE YP_003003761.1 1614735 D 561229 CDS YP_003003762.1 251789041 8120463 1616089..1617078 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 1617078 8120463 Dd1591_1421 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003003762.1 1616089 D 561229 CDS YP_003003763.1 251789042 8120464 1617373..1619673 1 NC_012912.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: yen:YE3600 hydrogenase maturation protein; (NiFe) hydrogenase maturation protein HypF 1619673 8120464 Dd1591_1422 Dickeya zeae Ech1591 (NiFe) hydrogenase maturation protein HypF YP_003003763.1 1617373 D 561229 CDS YP_003003764.1 251789043 8120465 1619798..1620274 1 NC_012912.1 KEGG: eca:ECA3006 hypothetical protein; hypothetical protein 1620274 8120465 Dd1591_1423 Dickeya zeae Ech1591 hypothetical protein YP_003003764.1 1619798 D 561229 CDS YP_003003765.1 251789044 8120466 1620400..1621125 1 NC_012912.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 1621125 8120466 Dd1591_1424 Dickeya zeae Ech1591 glutamine amidotransferase YP_003003765.1 1620400 D 561229 CDS YP_003003766.1 251789045 8120467 1621131..1622549 1 NC_012912.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: eca:ECA3004 transcription regulator GntR; GntR family transcriptional regulator 1622549 8120467 Dd1591_1425 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003003766.1 1621131 D 561229 CDS YP_003003767.1 251789046 8120468 complement(1623075..1623323) 1 NC_012912.1 KEGG: eca:ECA3326 hypothetical protein; hypothetical protein 1623323 8120468 Dd1591_1426 Dickeya zeae Ech1591 hypothetical protein YP_003003767.1 1623075 R 561229 CDS YP_003003768.1 251789047 8120469 1623390..1626440 1 NC_012912.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: eca:ECA1408 formate dehydrogenase, nitrate-inducible, major subunit; formate dehydrogenase subunit alpha 1626440 8120469 Dd1591_1427 Dickeya zeae Ech1591 formate dehydrogenase subunit alpha YP_003003768.1 1623390 D 561229 CDS YP_003003769.1 251789048 8120470 1626456..1627358 1 NC_012912.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spe:Spro_0085 formate dehydrogenase, beta subunit; formate dehydrogenase subunit beta 1627358 8120470 Dd1591_1428 Dickeya zeae Ech1591 formate dehydrogenase subunit beta YP_003003769.1 1626456 D 561229 CDS YP_003003770.1 251789049 8120471 1627345..1627980 1 NC_012912.1 cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma 1627980 8120471 Dd1591_1429 Dickeya zeae Ech1591 formate dehydrogenase-O subunit gamma YP_003003770.1 1627345 D 561229 CDS YP_003003771.1 251789050 8120472 1628323..1629312 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 1629312 8120472 Dd1591_1430 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003003771.1 1628323 D 561229 CDS YP_003003772.1 251789051 8120473 complement(1629582..1630880) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2307 major facilitator transporter; major facilitator superfamily protein 1630880 8120473 Dd1591_1431 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003003772.1 1629582 R 561229 CDS YP_003003773.1 251789052 8120474 1631213..1632148 1 NC_012912.1 required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 1632148 8120474 Dd1591_1432 Dickeya zeae Ech1591 formate dehydrogenase accessory protein FdhE YP_003003773.1 1631213 D 561229 CDS YP_003003774.1 251789053 8120475 1633171..1634151 1 NC_012912.1 KEGG: elf:LF82_p159 exported protein precursor; exported protein precursor 1634151 8120475 Dd1591_1433 Dickeya zeae Ech1591 exported protein precursor YP_003003774.1 1633171 D 561229 CDS YP_003003775.1 251789054 8120476 complement(1634310..1635692) 1 NC_012912.1 TIGRFAM: pectate lyase; KEGG: cja:CJA_0384 pectate lyase, putative, pel10C; pectate lyase 1635692 8120476 Dd1591_1434 Dickeya zeae Ech1591 pectate lyase YP_003003775.1 1634310 R 561229 CDS YP_003003776.1 251789055 8120477 complement(1635832..1637469) 1 NC_012912.1 PFAM: glycoside hydrolase family 43; KEGG: eca:ECA3847 putative xylosidase/arabinosidase; glycoside hydrolase family 43 1637469 8120477 Dd1591_1435 Dickeya zeae Ech1591 glycoside hydrolase family 43 YP_003003776.1 1635832 R 561229 CDS YP_003003777.1 251789056 8120478 1637658..1637789 1 NC_012912.1 KEGG: ypy:YPK_0408 hypothetical protein; hypothetical protein 1637789 8120478 Dd1591_1436 Dickeya zeae Ech1591 hypothetical protein YP_003003777.1 1637658 D 561229 CDS YP_003003778.1 251789057 8120479 1637907..1639196 1 NC_012912.1 PFAM: Nitrate and nitrite sensing domain protein; ANTAR domain protein; KEGG: eca:ECA2995 nitrate-and nitrite-responsive positive regulator; ANTAR domain-containing protein 1639196 8120479 Dd1591_1437 Dickeya zeae Ech1591 ANTAR domain-containing protein YP_003003778.1 1637907 D 561229 CDS YP_003003779.1 251789058 8120480 1639648..1640946 1 NC_012912.1 KEGG: eca:ECA2994 nitrate-binding proteint; nitrate-binding proteint 1640946 8120480 Dd1591_1438 Dickeya zeae Ech1591 nitrate-binding proteint YP_003003779.1 1639648 D 561229 CDS YP_003003780.1 251789059 8120481 1640959..1641891 1 NC_012912.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2993 nitrate transporter permease component; nitrate ABC transporter permease 1641891 8120481 Dd1591_1439 Dickeya zeae Ech1591 nitrate ABC transporter permease YP_003003780.1 1640959 D 561229 CDS YP_003003781.1 251789060 8120482 1641902..1642696 1 NC_012912.1 KEGG: eca:ECA2992 nitrate transport protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPase subunits C and D 1642696 8120482 Dd1591_1440 Dickeya zeae Ech1591 nitrate ABC transporter ATPase subunits C and D YP_003003781.1 1641902 D 561229 CDS YP_003003782.1 251789061 8120483 1642709..1646869 1 NC_012912.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: eca:ECA2991 nitrite reductase [NAD(P)H] large subunit; nitrite reductase (NAD(P)H), large subunit 1646869 8120483 Dd1591_1441 Dickeya zeae Ech1591 nitrite reductase (NAD(P)H), large subunit YP_003003782.1 1642709 D 561229 CDS YP_003003783.1 251789062 8120484 1646866..1649514 1 NC_012912.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: eca:ECA2990 nitrate reductase; molybdopterin oxidoreductase 1649514 8120484 Dd1591_1442 Dickeya zeae Ech1591 molybdopterin oxidoreductase YP_003003783.1 1646866 D 561229 CDS YP_003003784.1 251789063 8120485 1649542..1650372 1 NC_012912.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA2989 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 1650372 8120485 Dd1591_1443 Dickeya zeae Ech1591 uroporphyrin-III C-methyltransferase YP_003003784.1 1649542 D 561229 CDS YP_003003785.1 251789064 8120486 complement(1650422..1650967) 1 NC_012912.1 PFAM: NADPH-dependent FMN reductase; KEGG: dar:Daro_2797 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) 1650967 8120486 Dd1591_1444 Dickeya zeae Ech1591 NAD(P)H dehydrogenase (quinone) YP_003003785.1 1650422 R 561229 CDS YP_003003786.1 251789065 8120487 complement(1651139..1651495) 1 NC_012912.1 KEGG: pha:PSHAa1464 hypothetical protein; hypothetical protein 1651495 8120487 Dd1591_1445 Dickeya zeae Ech1591 hypothetical protein YP_003003786.1 1651139 R 561229 CDS YP_003003787.1 251789066 8120488 complement(1651756..1652025) 1 NC_012912.1 hypothetical protein 1652025 8120488 Dd1591_1446 Dickeya zeae Ech1591 hypothetical protein YP_003003787.1 1651756 R 561229 CDS YP_003003788.1 251789067 8120489 1652261..1653412 1 NC_012912.1 KEGG: pfo:Pfl01_4299 hypothetical protein; hypothetical protein 1653412 8120489 Dd1591_1447 Dickeya zeae Ech1591 hypothetical protein YP_003003788.1 1652261 D 561229 CDS YP_003003789.1 251789068 8120490 1653472..1654623 1 NC_012912.1 KEGG: pfo:Pfl01_4299 hypothetical protein; hypothetical protein 1654623 8120490 Dd1591_1448 Dickeya zeae Ech1591 hypothetical protein YP_003003789.1 1653472 D 561229 CDS YP_003003790.1 251789069 8120491 complement(1654735..1655511) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ent:Ent638_1970 extracellular solute-binding protein; extracellular solute-binding protein family 3 1655511 8120491 Dd1591_1449 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003003790.1 1654735 R 561229 CDS YP_003003791.1 251789070 8120492 complement(1655650..1656825) 1 NC_012912.1 catalyzes the transfer of an amino moiety; putative aminotransferase 1656825 8120492 Dd1591_1450 Dickeya zeae Ech1591 putative aminotransferase YP_003003791.1 1655650 R 561229 CDS YP_003003792.1 251789071 8120493 1657111..1658070 1 NC_012912.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_1967 LysR family transcriptional regulator; LysR family transcriptional regulator 1658070 8120493 Dd1591_1451 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003792.1 1657111 D 561229 CDS YP_003003793.1 251789072 8120494 complement(1658061..1659077) 1 NC_012912.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: aha:AHA_2573 microcin immunity protein; peptidase U61 LD-carboxypeptidase A 1659077 8120494 Dd1591_1452 Dickeya zeae Ech1591 peptidase U61 LD-carboxypeptidase A YP_003003793.1 1658061 R 561229 CDS YP_003003794.1 251789073 8120495 1659458..1661056 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_2152 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1661056 8120495 Dd1591_1453 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003794.1 1659458 D 561229 CDS YP_003003795.1 251789074 8120497 1661363..1664071 1 NC_012912.1 PFAM: Ankyrin; SMART: Ankyrin; KEGG: vvu:VV2_0907 ankyrin repeateat-containing protein; ankyrin 1664071 8120497 Dd1591_1455 Dickeya zeae Ech1591 ankyrin YP_003003795.1 1661363 D 561229 CDS YP_003003796.1 251789075 8120498 complement(1664244..1666007) 1 NC_012912.1 KEGG: eca:ECA4379 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1666007 8120498 Dd1591_1456 Dickeya zeae Ech1591 gamma-glutamyltransferase YP_003003796.1 1664244 R 561229 CDS YP_003003797.1 251789076 8120499 complement(1666351..1667598) 1 NC_012912.1 PFAM: glycosyl transferase family 28; KEGG: bam:Bamb_4507 glycosyl transferase family protein; glycosyl transferase family 28 1667598 8120499 Dd1591_1457 Dickeya zeae Ech1591 glycosyl transferase family 28 YP_003003797.1 1666351 R 561229 CDS YP_003003798.1 251789077 8120500 complement(1668186..1668335) 1 NC_012912.1 KEGG: set:SEN0307 IS3 transposase; hypothetical protein 1668335 8120500 Dd1591_1458 Dickeya zeae Ech1591 hypothetical protein YP_003003798.1 1668186 R 561229 CDS YP_003003799.1 251789078 8120501 1668603..1669166 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: sek:SSPA2003 putative TetR-family transcriptional regulator; TetR family transcriptional regulator 1669166 8120501 Dd1591_1459 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003003799.1 1668603 D 561229 CDS YP_003003800.1 251789079 8120502 1669640..1670743 1 NC_012912.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: psb:Psyr_2283 secretion protein HlyD; RND family efflux transporter MFP subunit 1670743 8120502 Dd1591_1460 Dickeya zeae Ech1591 RND family efflux transporter MFP subunit YP_003003800.1 1669640 D 561229 CDS YP_003003801.1 251789080 8120504 1673930..1675372 1 NC_012912.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: dac:Daci_5856 RND efflux system outer membrane lipoprotein; RND efflux system, outer membrane lipoprotein, NodT family 1675372 8120504 Dd1591_1462 Dickeya zeae Ech1591 RND efflux system, outer membrane lipoprotein, NodT family YP_003003801.1 1673930 D 561229 CDS YP_003003802.1 251789081 8120505 complement(1675457..1676608) 1 NC_012912.1 KEGG: pfo:Pfl01_4305 hypothetical protein; hypothetical protein 1676608 8120505 Dd1591_1463 Dickeya zeae Ech1591 hypothetical protein YP_003003802.1 1675457 R 561229 CDS YP_003003803.1 251789082 8120506 complement(1676724..1677704) 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: gdj:Gdia_1683 aldo/keto reductase; aldo/keto reductase 1677704 8120506 Dd1591_1464 Dickeya zeae Ech1591 aldo/keto reductase YP_003003803.1 1676724 R 561229 CDS YP_003003804.1 251789083 8120508 complement(1679539..1679700) 1 NC_012912.1 hypothetical protein 1679700 8120508 Dd1591_1466 Dickeya zeae Ech1591 hypothetical protein YP_003003804.1 1679539 R 561229 CDS YP_003003805.1 251789084 8120509 complement(1679797..1685643) 1 NC_012912.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pfl:PFL_3016 helicase; DEAD/DEAH box helicase domain-containing protein 1685643 8120509 Dd1591_1467 Dickeya zeae Ech1591 DEAD/DEAH box helicase domain-containing protein YP_003003805.1 1679797 R 561229 CDS YP_003003806.1 251789085 8120510 complement(1685663..1687750) 1 NC_012912.1 KEGG: pfl:PFL_3015 hypothetical protein; hypothetical protein 1687750 8120510 Dd1591_1468 Dickeya zeae Ech1591 hypothetical protein YP_003003806.1 1685663 R 561229 CDS YP_003003807.1 251789086 8120511 complement(1687763..1690324) 1 NC_012912.1 KEGG: pfl:PFL_3014 hypothetical protein; hypothetical protein 1690324 8120511 Dd1591_1469 Dickeya zeae Ech1591 hypothetical protein YP_003003807.1 1687763 R 561229 CDS YP_003003808.1 251789087 8120512 complement(1690321..1691556) 1 NC_012912.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: pfl:PFL_3013 DNA-cytosine methyltransferase; DNA-cytosine methyltransferase 1691556 8120512 Dd1591_1470 Dickeya zeae Ech1591 DNA-cytosine methyltransferase YP_003003808.1 1690321 R 561229 CDS YP_003003809.1 251789088 8120513 1691841..1692863 1 NC_012912.1 KEGG: tgr:Tgr7_2822 hypothetical protein; hypothetical protein 1692863 8120513 Dd1591_1471 Dickeya zeae Ech1591 hypothetical protein YP_003003809.1 1691841 D 561229 CDS YP_003003810.1 251789089 8117348 1693607..1694551 1 NC_012912.1 PFAM: domain of unknown function DUF1738; KEGG: kpe:KPK_1761 putative antirestriction protein; hypothetical protein 1694551 8117348 Dd1591_1473 Dickeya zeae Ech1591 hypothetical protein YP_003003810.1 1693607 D 561229 CDS YP_003003811.1 251789090 8117349 1694872..1695108 1 NC_012912.1 PFAM: Post-segregation antitoxin CcdA; KEGG: spe:Spro_1554 post-segregation antitoxin CcdA; Post-segregation antitoxin CcdA 1695108 8117349 Dd1591_1474 Dickeya zeae Ech1591 Post-segregation antitoxin CcdA YP_003003811.1 1694872 D 561229 CDS YP_003003812.1 251789091 8117350 1695111..1695425 1 NC_012912.1 PFAM: CcdB protein; KEGG: spe:Spro_1555 CcdB protein; CcdB protein 1695425 8117350 Dd1591_1475 Dickeya zeae Ech1591 CcdB protein YP_003003812.1 1695111 D 561229 CDS YP_003003813.1 251789092 8117351 complement(1695443..1696174) 1 NC_012912.1 KEGG: kpe:KPK_1772 putative MobC protein; putative MobC protein 1696174 8117351 Dd1591_1476 Dickeya zeae Ech1591 putative MobC protein YP_003003813.1 1695443 R 561229 CDS YP_003003814.1 251789093 8117352 complement(1696183..1698012) 1 NC_012912.1 KEGG: kpe:KPK_1773 type IV conjugative transfer system coupling protein TraD; type IV conjugative transfer system coupling protein TraD 1698012 8117352 Dd1591_1477 Dickeya zeae Ech1591 type IV conjugative transfer system coupling protein TraD YP_003003814.1 1696183 R 561229 CDS YP_003003815.1 251789094 8117353 complement(1698683..1698985) 1 NC_012912.1 KEGG: kpe:KPK_1774 putative lipoprotein; putative lipoprotein 1698985 8117353 Dd1591_1478 Dickeya zeae Ech1591 putative lipoprotein YP_003003815.1 1698683 R 561229 CDS YP_003003816.1 251789095 8117354 complement(1699026..1700042) 1 NC_012912.1 TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: eca:ECA1613 putative conjugal transfer protein; Sigma 54 interacting domain-containing protein 1700042 8117354 Dd1591_1479 Dickeya zeae Ech1591 Sigma 54 interacting domain-containing protein YP_003003816.1 1699026 R 561229 CDS YP_003003817.1 251789096 8117355 complement(1700032..1701234) 1 NC_012912.1 PFAM: conjugation TrbI family protein; KEGG: kpe:KPK_1776 bacterial conjugation TrbI-like protein; conjugation TrbI family protein 1701234 8117355 Dd1591_1480 Dickeya zeae Ech1591 conjugation TrbI family protein YP_003003817.1 1700032 R 561229 CDS YP_003003818.1 251789097 8117356 complement(1701231..1702121) 1 NC_012912.1 TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: eca:ECA1615 putative conjugal transfer protein; P-type conjugative transfer protein VirB9 1702121 8117356 Dd1591_1481 Dickeya zeae Ech1591 P-type conjugative transfer protein VirB9 YP_003003818.1 1701231 R 561229 CDS YP_003003819.1 251789098 8117357 complement(1702121..1702804) 1 NC_012912.1 PFAM: VirB8 family protein; KEGG: kpe:KPK_1778 type IV secretion system protein VirB8; VirB8 family protein 1702804 8117357 Dd1591_1482 Dickeya zeae Ech1591 VirB8 family protein YP_003003819.1 1702121 R 561229 CDS YP_003003820.1 251789099 8117358 complement(1702797..1702937) 1 NC_012912.1 KEGG: kpe:KPK_1779 putative conjugal transfer protein; putative conjugal transfer protein 1702937 8117358 Dd1591_1483 Dickeya zeae Ech1591 putative conjugal transfer protein YP_003003820.1 1702797 R 561229 CDS YP_003003821.1 251789100 8117359 complement(1703025..1704053) 1 NC_012912.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: eca:ECA1617 putative conjugal transfer protein; TrbL/VirB6 plasmid conjugal transfer protein 1704053 8117359 Dd1591_1484 Dickeya zeae Ech1591 TrbL/VirB6 plasmid conjugal transfer protein YP_003003821.1 1703025 R 561229 CDS YP_003003822.1 251789101 8117360 complement(1704065..1704289) 1 NC_012912.1 KEGG: ecq:ECED1_2265 conserved hypothetical protein; putative exported protein; hypothetical protein 1704289 8117360 Dd1591_1485 Dickeya zeae Ech1591 hypothetical protein YP_003003822.1 1704065 R 561229 CDS YP_003003823.1 251789102 8117361 complement(1704300..1705016) 1 NC_012912.1 PFAM: type IV secretion system family protein; KEGG: eca:ECA1619 putative conjugal transfer protein; type IV secretion system family protein 1705016 8117361 Dd1591_1486 Dickeya zeae Ech1591 type IV secretion system family protein YP_003003823.1 1704300 R 561229 CDS YP_003003824.1 251789103 8117362 complement(1705041..1707788) 1 NC_012912.1 PFAM: CagE TrbE VirB component of type IV transporter system; type IV secretory pathway VirB3 family protein; KEGG: eca:ECA1620 putative conjugal transfer protein; CagE TrbE VirB component of type IV transporter system 1707788 8117362 Dd1591_1487 Dickeya zeae Ech1591 CagE TrbE VirB component of type IV transporter system YP_003003824.1 1705041 R 561229 CDS YP_003003825.1 251789104 8117363 complement(1707798..1708073) 1 NC_012912.1 PFAM: Conjugal transfer protein TrbC; KEGG: eca:ECA1621 putative conjugal transfer protein; conjugal transfer protein TrbC 1708073 8117363 Dd1591_1488 Dickeya zeae Ech1591 conjugal transfer protein TrbC YP_003003825.1 1707798 R 561229 CDS YP_003003826.1 251789105 8117364 complement(1708093..1708740) 1 NC_012912.1 PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA1622 putative conjugal transfer protein; Lytic transglycosylase catalytic 1708740 8117364 Dd1591_1489 Dickeya zeae Ech1591 Lytic transglycosylase catalytic YP_003003826.1 1708093 R 561229 CDS YP_003003827.1 251789106 8117365 complement(1708810..1709043) 1 NC_012912.1 KEGG: eca:ECA1623 hypothetical protein; hypothetical protein 1709043 8117365 Dd1591_1490 Dickeya zeae Ech1591 hypothetical protein YP_003003827.1 1708810 R 561229 CDS YP_003003828.1 251789107 8117366 1709363..1710400 1 NC_012912.1 KEGG: shl:Shal_2175 hypothetical protein; hypothetical protein 1710400 8117366 Dd1591_1491 Dickeya zeae Ech1591 hypothetical protein YP_003003828.1 1709363 D 561229 CDS YP_003003829.1 251789108 8117367 1710394..1712670 1 NC_012912.1 PFAM: helicase domain protein; SMART: DEAD-like helicase; KEGG: shl:Shal_2176 helicase domain-containing protein; helicase domain-containing protein 1712670 8117367 Dd1591_1492 Dickeya zeae Ech1591 helicase domain-containing protein YP_003003829.1 1710394 D 561229 CDS YP_003003830.1 251789109 8117368 1712751..1713959 1 NC_012912.1 PFAM: transposase mutator type; KEGG: yps:YPTB0777 putative transposase-like protein; transposase mutator type 1713959 8117368 Dd1591_1493 Dickeya zeae Ech1591 transposase mutator type YP_003003830.1 1712751 D 561229 CDS YP_003003831.1 251789110 8117369 complement(1714453..1714662) 1 NC_012912.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: eca:ECA1625 putative conjugal transfer protein; TraR/DksA family transcriptional regulator 1714662 8117369 Dd1591_1494 Dickeya zeae Ech1591 TraR/DksA family transcriptional regulator YP_003003831.1 1714453 R 561229 CDS YP_003003832.1 251789111 8117370 complement(1714652..1715236) 1 NC_012912.1 KEGG: eca:ECA1626 hypothetical protein; hypothetical protein 1715236 8117370 Dd1591_1495 Dickeya zeae Ech1591 hypothetical protein YP_003003832.1 1714652 R 561229 CDS YP_003003833.1 251789112 8117371 complement(1715253..1715447) 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: eca:ECA1627 putative prophage regulatory protein; phage transcriptional regulator AlpA 1715447 8117371 Dd1591_1496 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003003833.1 1715253 R 561229 CDS YP_003003834.1 251789113 8117372 complement(1715942..1716199) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ses:SARI_03129 hypothetical protein; XRE family transcriptional regulator 1716199 8117372 Dd1591_1497 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003834.1 1715942 R 561229 CDS YP_003003835.1 251789114 8117373 complement(1716313..1716591) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ses:SARI_03130 hypothetical protein; XRE family transcriptional regulator 1716591 8117373 Dd1591_1498 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003835.1 1716313 R 561229 CDS YP_003003836.1 251789115 8117374 1716725..1717012 1 NC_012912.1 KEGG: plu:plu0729 hypothetical protein; putative transcriptional regulator Nlp 1717012 8117374 Dd1591_1499 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003003836.1 1716725 D 561229 CDS YP_003003837.1 251789116 8117375 complement(1717345..1717590) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcm:Bcenmc03_6923 XRE family transcriptional regulator; XRE family transcriptional regulator 1717590 8117375 Dd1591_1500 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003837.1 1717345 R 561229 CDS YP_003003838.1 251789117 8117376 1717937..1718455 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein; Hcp1 family type VI secretion system effector 1718455 8117376 Dd1591_1501 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003003838.1 1717937 D 561229 CDS YP_003003839.1 251789118 8117377 1718568..1720421 1 NC_012912.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 putative rhs accessory genetic element; type VI secretion system Vgr family protein 1720421 8117377 Dd1591_1502 Dickeya zeae Ech1591 type VI secretion system Vgr family protein YP_003003839.1 1718568 D 561229 CDS YP_003003840.1 251789119 8117378 1720435..1720842 1 NC_012912.1 PFAM: Domain of unknown function DUF1795; KEGG: eca:ECA2868 hypothetical protein; hypothetical protein 1720842 8117378 Dd1591_1503 Dickeya zeae Ech1591 hypothetical protein YP_003003840.1 1720435 D 561229 CDS YP_003003841.1 251789120 8117379 1720854..1725227 1 NC_012912.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; PAAR repeat-containing protein; KEGG: eca:ECA4278 rhs-family protein; YD repeat protein 1725227 8117379 Dd1591_1504 Dickeya zeae Ech1591 YD repeat protein YP_003003841.1 1720854 D 561229 CDS YP_003003842.1 251789121 8117380 1725224..1725649 1 NC_012912.1 KEGG: spc:Sputcn32_3208 hypothetical protein; hypothetical protein 1725649 8117380 Dd1591_1505 Dickeya zeae Ech1591 hypothetical protein YP_003003842.1 1725224 D 561229 CDS YP_003003843.1 251789122 8117382 1726467..1726898 1 NC_012912.1 KEGG: btr:Btr_0399 hypothetical protein; hypothetical protein 1726898 8117382 Dd1591_1507 Dickeya zeae Ech1591 hypothetical protein YP_003003843.1 1726467 D 561229 CDS YP_003003844.1 251789123 8117383 complement(1727147..1728073) 1 NC_012912.1 KEGG: kpe:KPK_1790 hypothetical protein; hypothetical protein 1728073 8117383 Dd1591_1508 Dickeya zeae Ech1591 hypothetical protein YP_003003844.1 1727147 R 561229 CDS YP_003003845.1 251789124 8117384 1729091..1729402 1 NC_012912.1 PFAM: protein of unknown function DUF736; KEGG: pna:Pnap_4161 hypothetical protein; hypothetical protein 1729402 8117384 Dd1591_1509 Dickeya zeae Ech1591 hypothetical protein YP_003003845.1 1729091 D 561229 CDS YP_003003846.1 251789125 8117386 complement(1730176..1730448) 1 NC_012912.1 KEGG: pmr:PMI3401 sugar fermentation stimulation protein; putative transcriptional regulator Nlp 1730448 8117386 Dd1591_1511 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003003846.1 1730176 R 561229 CDS YP_003003847.1 251789126 8117387 1730674..1730910 1 NC_012912.1 KEGG: kpn:KPN_02949 putative transcriptional regulator; putative transcriptional regulator 1730910 8117387 Dd1591_1512 Dickeya zeae Ech1591 putative transcriptional regulator YP_003003847.1 1730674 D 561229 CDS YP_003003848.1 251789127 8117388 1731123..1731410 1 NC_012912.1 SMART: helix-turn-helix domain protein; KEGG: kpn:KPN_02949 putative transcriptional regulator; XRE family transcriptional regulator 1731410 8117388 Dd1591_1513 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003003848.1 1731123 D 561229 CDS YP_003003849.1 251789128 8117389 complement(1731524..1732795) 1 NC_012912.1 PFAM: integrase family protein; KEGG: kpe:KPK_1799 integrase; integrase family protein 1732795 8117389 Dd1591_1514 Dickeya zeae Ech1591 integrase family protein YP_003003849.1 1731524 R 561229 CDS YP_003003850.1 251789129 8117391 1733417..1733692 1 NC_012912.1 PFAM: regulatory protein LysR; KEGG: eca:ECA2888 nitrogen assimilation regulatory protein (partial); LysR family transcriptional regulator 1733692 8117391 Dd1591_1515 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003003850.1 1733417 D 561229 CDS YP_003003851.1 251789130 8117392 complement(1733788..1735197) 1 NC_012912.1 PFAM: amino acid permease-associated region; KEGG: eca:ECA2885 D-alanine/D-serine/glycine permease; amino acid permease-like protein 1735197 8117392 Dd1591_1516 Dickeya zeae Ech1591 amino acid permease-like protein YP_003003851.1 1733788 R 561229 CDS YP_003003852.1 251789131 8117394 complement(1735871..1736095) 1 NC_012912.1 KEGG: eca:ECA2883 hypothetical protein; hypothetical protein 1736095 8117394 Dd1591_1517 Dickeya zeae Ech1591 hypothetical protein YP_003003852.1 1735871 R 561229 CDS YP_003003853.1 251789132 8117395 1736746..1737408 1 NC_012912.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 1737408 8117395 Dd1591_1518 Dickeya zeae Ech1591 response regulator YP_003003853.1 1736746 D 561229 CDS YP_003003854.1 251789133 8117396 1737401..1739233 1 NC_012912.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1739233 uvrC 8117396 uvrC Dickeya zeae Ech1591 excinuclease ABC subunit C YP_003003854.1 1737401 D 561229 CDS YP_003003855.1 251789134 8117397 1739291..1739839 1 NC_012912.1 KEGG: yen:YE1829 phosphatidylglycerophosphate synthetase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; phosphatidylglycerophosphate synthetase 1739839 8117397 Dd1591_1520 Dickeya zeae Ech1591 phosphatidylglycerophosphate synthetase YP_003003855.1 1739291 D 561229 CDS YP_003003856.1 251789135 8117402 1741166..1742854 1 NC_012912.1 KEGG: ent:Ent638_1341 hypothetical protein; hypothetical protein 1742854 8117402 Dd1591_1522 Dickeya zeae Ech1591 hypothetical protein YP_003003856.1 1741166 D 561229 CDS YP_003003857.1 251789136 8117403 1742941..1743207 1 NC_012912.1 KEGG: yps:YPTB1774 putative integrase; putative integrase 1743207 8117403 Dd1591_1523 Dickeya zeae Ech1591 putative integrase YP_003003857.1 1742941 D 561229 CDS YP_003003858.1 251789137 8117404 1743308..1743874 1 NC_012912.1 hypothetical protein 1743874 8117404 Dd1591_1524 Dickeya zeae Ech1591 hypothetical protein YP_003003858.1 1743308 D 561229 CDS YP_003003859.1 251789138 8117405 complement(1744185..1744625) 1 NC_012912.1 KEGG: eca:ECA2615 putative phage encoded host lysis, regulatory protein; putative phage encoded host lysis, regulatory protein 1744625 8117405 Dd1591_1525 Dickeya zeae Ech1591 putative phage encoded host lysis, regulatory protein YP_003003859.1 1744185 R 561229 CDS YP_003003860.1 251789139 8117406 complement(1744622..1745113) 1 NC_012912.1 PFAM: glycoside hydrolase family 24; KEGG: kpn:KPN_04875 putative prophage endolysin, control of lysis; Lysozyme 1745113 8117406 Dd1591_1526 Dickeya zeae Ech1591 Lysozyme YP_003003860.1 1744622 R 561229 CDS YP_003003861.1 251789140 8117407 complement(1745103..1745414) 1 NC_012912.1 PFAM: holin family 2; KEGG: eca:ECA2617 phage lysis protein Y, holin; holin family 2 1745414 8117407 Dd1591_1527 Dickeya zeae Ech1591 holin family 2 YP_003003861.1 1745103 R 561229 CDS YP_003003862.1 251789141 8117408 1746038..1747315 1 NC_012912.1 SMART: Parallel beta-helix repeat; KEGG: sde:Sde_2946 hypothetical protein; Parallel beta-helix repeat protein 1747315 8117408 Dd1591_1528 Dickeya zeae Ech1591 Parallel beta-helix repeat protein YP_003003862.1 1746038 D 561229 CDS YP_003003863.1 251789142 8117409 complement(1747386..1748666) 1 NC_012912.1 KEGG: pat:Patl_1404 cellulase; PFAM: glycoside hydrolase family 5; Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; Cellulase 1748666 8117409 Dd1591_1529 Dickeya zeae Ech1591 Cellulase YP_003003863.1 1747386 R 561229 CDS YP_003003864.1 251789143 8117410 complement(1749254..1749631) 1 NC_012912.1 PFAM: cytochrome b562; KEGG: eca:ECA2222 putative soluble cytochrome b562; cytochrome b562 1749631 8117410 Dd1591_1530 Dickeya zeae Ech1591 cytochrome b562 YP_003003864.1 1749254 R 561229 CDS YP_003003865.1 251789144 8117411 complement(1749899..1751335) 1 NC_012912.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: eca:ECA2762 hypothetical protein; hypothetical protein 1751335 8117411 Dd1591_1531 Dickeya zeae Ech1591 hypothetical protein YP_003003865.1 1749899 R 561229 CDS YP_003003866.1 251789145 8117412 1751452..1751589 1 NC_012912.1 hypothetical protein 1751589 8117412 Dd1591_1532 Dickeya zeae Ech1591 hypothetical protein YP_003003866.1 1751452 D 561229 CDS YP_003003867.1 251789146 8117414 1751970..1752170 1 NC_012912.1 KEGG: eca:ECA1682 hypothetical protein; hypothetical protein 1752170 8117414 Dd1591_1534 Dickeya zeae Ech1591 hypothetical protein YP_003003867.1 1751970 D 561229 CDS YP_003003868.1 251789147 8117415 complement(1752208..1753932) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1683 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1753932 8117415 Dd1591_1535 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003868.1 1752208 R 561229 CDS YP_003003869.1 251789148 8117416 1754855..1755205 1 NC_012912.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 1755205 8117416 Dd1591_1536 Dickeya zeae Ech1591 transcriptional activator FlhD YP_003003869.1 1754855 D 561229 CDS YP_003003870.1 251789149 8117417 1755205..1755786 1 NC_012912.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 1755786 8117417 Dd1591_1537 Dickeya zeae Ech1591 transcriptional activator FlhC YP_003003870.1 1755205 D 561229 CDS YP_003003871.1 251789150 8117418 1755920..1756807 1 NC_012912.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 1756807 8117418 Dd1591_1538 Dickeya zeae Ech1591 flagellar motor protein MotA YP_003003871.1 1755920 D 561229 CDS YP_003003872.1 251789151 8117419 1756804..1757934 1 NC_012912.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1757934 motB 8117419 motB Dickeya zeae Ech1591 flagellar motor protein MotB YP_003003872.1 1756804 D 561229 CDS YP_003003873.1 251789152 8117420 1757952..1759970 1 NC_012912.1 chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 1759970 8117420 Dd1591_1540 Dickeya zeae Ech1591 chemotaxis protein CheA YP_003003873.1 1757952 D 561229 CDS YP_003003874.1 251789153 8117421 1760006..1760503 1 NC_012912.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: eca:ECA1690 purine-binding chemotaxis protein; purine-binding chemotaxis protein 1760503 8117421 Dd1591_1541 Dickeya zeae Ech1591 purine-binding chemotaxis protein YP_003003874.1 1760006 D 561229 CDS YP_003003875.1 251789154 8117422 1760622..1762322 1 NC_012912.1 PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; KEGG: eca:ECA1691 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1762322 8117422 Dd1591_1542 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003875.1 1760622 D 561229 CDS YP_003003876.1 251789155 8117423 1763027..1763899 1 NC_012912.1 methylates the MCP; chemotaxis methyltransferase CheR 1763899 8117423 Dd1591_1543 Dickeya zeae Ech1591 chemotaxis methyltransferase CheR YP_003003876.1 1763027 D 561229 CDS YP_003003877.1 251789156 8117424 1763899..1764951 1 NC_012912.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1764951 8117424 Dd1591_1544 Dickeya zeae Ech1591 chemotaxis-specific methylesterase YP_003003877.1 1763899 D 561229 CDS YP_003003878.1 251789157 8117425 1764987..1765376 1 NC_012912.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA1694 chemotaxis regulatory protein CheY; response regulator receiver protein 1765376 8117425 Dd1591_1545 Dickeya zeae Ech1591 response regulator receiver protein YP_003003878.1 1764987 D 561229 CDS YP_003003879.1 251789158 8117426 1765386..1766030 1 NC_012912.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 1766030 8117426 Dd1591_1546 Dickeya zeae Ech1591 chemotaxis regulator CheZ YP_003003879.1 1765386 D 561229 CDS YP_003003880.1 251789159 8118067 1766261..1767412 1 NC_012912.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1767412 flhB 8118067 flhB Dickeya zeae Ech1591 flagellar biosynthesis protein FlhB YP_003003880.1 1766261 D 561229 CDS YP_003003881.1 251789160 8118068 1767405..1769501 1 NC_012912.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1769501 flhA 8118068 flhA Dickeya zeae Ech1591 flagellar biosynthesis protein FlhA YP_003003881.1 1767405 D 561229 CDS YP_003003882.1 251789161 8118069 1769498..1769920 1 NC_012912.1 PFAM: flagellar FlhE family protein; KEGG: eta:ETA_14740 flagellar protein FlhE; flagellar FlhE family protein 1769920 8118069 Dd1591_1549 Dickeya zeae Ech1591 flagellar FlhE family protein YP_003003882.1 1769498 D 561229 CDS YP_003003883.1 251789162 8118070 complement(1769983..1770420) 1 NC_012912.1 PFAM: FlgN family protein; KEGG: eca:ECA1699 flagella synthesis protein; FlgN family protein 1770420 8118070 Dd1591_1550 Dickeya zeae Ech1591 FlgN family protein YP_003003883.1 1769983 R 561229 CDS YP_003003884.1 251789163 8118071 complement(1770425..1770724) 1 NC_012912.1 regulates the flagellar specific sigma28 transcription factor; anti-sigma28 factor FlgM 1770724 8118071 Dd1591_1551 Dickeya zeae Ech1591 anti-sigma28 factor FlgM YP_003003884.1 1770425 R 561229 CDS YP_003003885.1 251789164 8118072 complement(1770870..1771538) 1 NC_012912.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1771538 flgA 8118072 flgA Dickeya zeae Ech1591 flagellar basal body P-ring biosynthesis protein FlgA YP_003003885.1 1770870 R 561229 CDS YP_003003886.1 251789165 8118073 1771705..1772124 1 NC_012912.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: eca:ECA1702 flagellar basal body rod protein FlgB; flagellar basal-body rod protein FlgB 1772124 8118073 Dd1591_1553 Dickeya zeae Ech1591 flagellar basal-body rod protein FlgB YP_003003886.1 1771705 D 561229 CDS YP_003003887.1 251789166 8118074 1772158..1772562 1 NC_012912.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1772562 flgC 8118074 flgC Dickeya zeae Ech1591 flagellar basal body rod protein FlgC YP_003003887.1 1772158 D 561229 CDS YP_003003888.1 251789167 8118075 1772575..1773246 1 NC_012912.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 1773246 flgD 8118075 flgD Dickeya zeae Ech1591 flagellar basal body rod modification protein YP_003003888.1 1772575 D 561229 CDS YP_003003889.1 251789168 8118076 1773313..1774530 1 NC_012912.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1774530 flgE 8118076 flgE Dickeya zeae Ech1591 flagellar hook protein FlgE YP_003003889.1 1773313 D 561229 CDS YP_003003890.1 251789169 8118077 1774552..1775307 1 NC_012912.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: eca:ECA1706 flagellar basal body rod protein FlgF; flagellar basal body rod protein 1775307 8118077 Dd1591_1557 Dickeya zeae Ech1591 flagellar basal body rod protein YP_003003890.1 1774552 D 561229 CDS YP_003003891.1 251789170 8118078 1775334..1776116 1 NC_012912.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: eca:ECA1707 flagellar basal body rod protein FlgG; flagellar basal-body rod protein FlgG 1776116 8118078 Dd1591_1558 Dickeya zeae Ech1591 flagellar basal-body rod protein FlgG YP_003003891.1 1775334 D 561229 CDS YP_003003892.1 251789171 8118079 1776247..1776966 1 NC_012912.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 1776966 flgH 8118079 flgH Dickeya zeae Ech1591 flagellar basal body L-ring protein YP_003003892.1 1776247 D 561229 CDS YP_003003893.1 251789172 8118080 1776983..1778092 1 NC_012912.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1778092 flgI 8118080 flgI Dickeya zeae Ech1591 flagellar basal body P-ring protein YP_003003893.1 1776983 D 561229 CDS YP_003003894.1 251789173 8118081 1778092..1779045 1 NC_012912.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 1779045 flgJ 8118081 flgJ Dickeya zeae Ech1591 flagellar rod assembly protein/muramidase FlgJ YP_003003894.1 1778092 D 561229 CDS YP_003003895.1 251789174 8118082 1779172..1781094 1 NC_012912.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: eca:ECA1711 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 1781094 8118082 Dd1591_1562 Dickeya zeae Ech1591 flagellar hook-associated protein FlgK YP_003003895.1 1779172 D 561229 CDS YP_003003896.1 251789175 8118083 1781127..1782056 1 NC_012912.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: eca:ECA1712 flagellar hook-associated protein FlgL; flagellar hook-associated protein 3 1782056 8118083 Dd1591_1563 Dickeya zeae Ech1591 flagellar hook-associated protein 3 YP_003003896.1 1781127 D 561229 CDS YP_003003897.1 251789176 8118084 complement(1782188..1782970) 1 NC_012912.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: eca:ECA1714 flagellar biosynthesis protein FliR; flagellar biosynthetic protein FliR 1782970 8118084 Dd1591_1564 Dickeya zeae Ech1591 flagellar biosynthetic protein FliR YP_003003897.1 1782188 R 561229 CDS YP_003003898.1 251789177 8118085 complement(1782973..1783242) 1 NC_012912.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1783242 fliQ 8118085 fliQ Dickeya zeae Ech1591 flagellar biosynthesis protein FliQ YP_003003898.1 1782973 R 561229 CDS YP_003003899.1 251789178 8118086 complement(1783283..1784059) 1 NC_012912.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: eca:ECA1716 flagellar biosynthesis protein FliP; flagellar biosynthetic protein FliP 1784059 8118086 Dd1591_1566 Dickeya zeae Ech1591 flagellar biosynthetic protein FliP YP_003003899.1 1783283 R 561229 CDS YP_003003900.1 251789179 8118087 complement(1784056..1784472) 1 NC_012912.1 PFAM: flagellar biosynthesis protein FliO; KEGG: eca:ECA1717 flagellar protein; flagellar biosynthesis protein FliO 1784472 8118087 Dd1591_1567 Dickeya zeae Ech1591 flagellar biosynthesis protein FliO YP_003003900.1 1784056 R 561229 CDS YP_003003901.1 251789180 8118088 complement(1784472..1784888) 1 NC_012912.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: eca:ECA1718 flagellar motor switch protein FliN; flagellar motor switch protein FliN 1784888 8118088 Dd1591_1568 Dickeya zeae Ech1591 flagellar motor switch protein FliN YP_003003901.1 1784472 R 561229 CDS YP_003003902.1 251789181 8118089 complement(1784881..1785897) 1 NC_012912.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1785897 fliM 8118089 fliM Dickeya zeae Ech1591 flagellar motor switch protein FliM YP_003003902.1 1784881 R 561229 CDS YP_003003903.1 251789182 8118090 complement(1785903..1786391) 1 NC_012912.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1786391 fliL 8118090 fliL Dickeya zeae Ech1591 flagellar basal body-associated protein FliL YP_003003903.1 1785903 R 561229 CDS YP_003003904.1 251789183 8118091 complement(1786525..1787856) 1 NC_012912.1 PFAM: flagellar hook-length control protein; KEGG: eca:ECA1721 flagellar hook-length control protein; flagellar hook-length control protein 1787856 8118091 Dd1591_1571 Dickeya zeae Ech1591 flagellar hook-length control protein YP_003003904.1 1786525 R 561229 CDS YP_003003905.1 251789184 8118092 complement(1787859..1788299) 1 NC_012912.1 rod/hook and filament chaperone; flagellar biosynthesis chaperone 1788299 fliJ 8118092 fliJ Dickeya zeae Ech1591 flagellar biosynthesis chaperone YP_003003905.1 1787859 R 561229 CDS YP_003003906.1 251789185 8118093 complement(1788308..1789678) 1 NC_012912.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1789678 fliI 8118093 fliI Dickeya zeae Ech1591 flagellum-specific ATP synthase YP_003003906.1 1788308 R 561229 CDS YP_003003907.1 251789186 8118094 complement(1789678..1790433) 1 NC_012912.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 1790433 fliH 8118094 fliH Dickeya zeae Ech1591 flagellar assembly protein H YP_003003907.1 1789678 R 561229 CDS YP_003003908.1 251789187 8118095 complement(1790417..1791409) 1 NC_012912.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1791409 fliG 8118095 fliG Dickeya zeae Ech1591 flagellar motor switch protein G YP_003003908.1 1790417 R 561229 CDS YP_003003909.1 251789188 8118096 complement(1791406..1793112) 1 NC_012912.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1793112 fliF 8118096 fliF Dickeya zeae Ech1591 flagellar MS-ring protein YP_003003909.1 1791406 R 561229 CDS YP_003003910.1 251789189 8118097 1793444..1793758 1 NC_012912.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: eca:ECA1727 flagellar hook-basal body protein FliE; flagellar hook-basal body complex subunit FliE 1793758 8118097 Dd1591_1577 Dickeya zeae Ech1591 flagellar hook-basal body complex subunit FliE YP_003003910.1 1793444 D 561229 CDS YP_003003911.1 251789190 8118098 complement(1793937..1794299) 1 NC_012912.1 PFAM: flagellar export chaperone; KEGG: eca:ECA1728 flagellar biosynthesis protein FliT; flagellar export chaperone 1794299 8118098 Dd1591_1578 Dickeya zeae Ech1591 flagellar export chaperone YP_003003911.1 1793937 R 561229 CDS YP_003003912.1 251789191 8118099 complement(1794299..1794709) 1 NC_012912.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: eca:ECA1729 flagellar protein FliS; flagellar protein FliS 1794709 8118099 Dd1591_1579 Dickeya zeae Ech1591 flagellar protein FliS YP_003003912.1 1794299 R 561229 CDS YP_003003913.1 251789192 8118100 complement(1794802..1796223) 1 NC_012912.1 PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: yps:YPTB1713 flagellar capping protein; flagellar hook-associated 2 domain-containing protein 1796223 8118100 Dd1591_1580 Dickeya zeae Ech1591 flagellar hook-associated 2 domain-containing protein YP_003003913.1 1794802 R 561229 CDS YP_003003914.1 251789193 8118101 1796564..1797391 1 NC_012912.1 PFAM: flagellin domain protein; KEGG: esa:ESA_01288 hypothetical protein; flagellin domain-containing protein 1797391 8118101 Dd1591_1581 Dickeya zeae Ech1591 flagellin domain-containing protein YP_003003914.1 1796564 D 561229 CDS YP_003003915.1 251789194 8118102 1797617..1801051 1 NC_012912.1 PFAM: Methyltransferase type 12; KEGG: eca:ECA1732 hypothetical protein; type 12 methyltransferase 1801051 8118102 Dd1591_1582 Dickeya zeae Ech1591 type 12 methyltransferase YP_003003915.1 1797617 D 561229 CDS YP_003003916.1 251789195 8118103 1801200..1802324 1 NC_012912.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cko:CKO_01022 hypothetical protein; DegT/DnrJ/EryC1/StrS aminotransferase 1802324 8118103 Dd1591_1583 Dickeya zeae Ech1591 DegT/DnrJ/EryC1/StrS aminotransferase YP_003003916.1 1801200 D 561229 CDS YP_003003917.1 251789196 8118104 1802414..1803595 1 NC_012912.1 KEGG: rec:RHECIAT_CH0001589 putative carbamoyl-phosphate-synthetase protein; putative carbamoyl-phosphate-synthetase protein 1803595 8118104 Dd1591_1584 Dickeya zeae Ech1591 putative carbamoyl-phosphate-synthetase protein YP_003003917.1 1802414 D 561229 CDS YP_003003918.1 251789197 8118105 1803592..1804719 1 NC_012912.1 PFAM: oxidoreductase domain protein; KEGG: ret:RHE_CH01518 putative oxidoreductase protein; oxidoreductase domain-containing protein 1804719 8118105 Dd1591_1585 Dickeya zeae Ech1591 oxidoreductase domain-containing protein YP_003003918.1 1803592 D 561229 CDS YP_003003919.1 251789198 8118106 1804788..1806221 1 NC_012912.1 KEGG: ent:Ent638_2521 hypothetical protein; hypothetical protein 1806221 8118106 Dd1591_1586 Dickeya zeae Ech1591 hypothetical protein YP_003003919.1 1804788 D 561229 CDS YP_003003920.1 251789199 8118107 complement(1806439..1807302) 1 NC_012912.1 hypothetical protein 1807302 8118107 Dd1591_1587 Dickeya zeae Ech1591 hypothetical protein YP_003003920.1 1806439 R 561229 CDS YP_003003921.1 251789200 8118108 complement(1807424..1808461) 1 NC_012912.1 KEGG: plu:plu4438 IS630 family transposase; IS630 family transposase 1808461 8118108 Dd1591_1588 Dickeya zeae Ech1591 IS630 family transposase YP_003003921.1 1807424 R 561229 CDS YP_003003922.1 251789201 8118109 complement(1808928..1809758) 1 NC_012912.1 KEGG: bcj:pBCA012 hypothetical protein; hypothetical protein 1809758 8118109 Dd1591_1589 Dickeya zeae Ech1591 hypothetical protein YP_003003922.1 1808928 R 561229 CDS YP_003003923.1 251789202 8118110 1810429..1811151 1 NC_012912.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 1811151 fliA 8118110 fliA Dickeya zeae Ech1591 flagellar biosynthesis sigma factor YP_003003923.1 1810429 D 561229 CDS YP_003003924.1 251789203 8118111 1811205..1811717 1 NC_012912.1 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ 1811717 8118111 Dd1591_1591 Dickeya zeae Ech1591 flagella biosynthesis protein FliZ YP_003003924.1 1811205 D 561229 CDS YP_003003925.1 251789204 8118112 1812131..1812475 1 NC_012912.1 hypothetical protein 1812475 8118112 Dd1591_1592 Dickeya zeae Ech1591 hypothetical protein YP_003003925.1 1812131 D 561229 CDS YP_003003926.1 251789205 8118113 1812454..1813242 1 NC_012912.1 PFAM: PhoH family protein; KEGG: eca:ECA1741 hypothetical protein; hypothetical protein 1813242 8118113 Dd1591_1593 Dickeya zeae Ech1591 hypothetical protein YP_003003926.1 1812454 D 561229 CDS YP_003003927.1 251789206 8118114 complement(1813303..1814907) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA3245 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1814907 8118114 Dd1591_1594 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003927.1 1813303 R 561229 CDS YP_003003928.1 251789207 8118115 1815719..1817044 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 1817044 8118115 Dd1591_1595 Dickeya zeae Ech1591 transposase IS4 family protein YP_003003928.1 1815719 D 561229 CDS YP_003003929.1 251789208 8118117 complement(1817362..1818000) 1 NC_012912.1 PFAM: Ribose/galactose isomerase; KEGG: eca:ECA1742 hypothetical protein; hypothetical protein 1818000 8118117 Dd1591_1596 Dickeya zeae Ech1591 hypothetical protein YP_003003929.1 1817362 R 561229 CDS YP_003003930.1 251789209 8118118 complement(1818379..1818897) 1 NC_012912.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1818897 8118118 Dd1591_1597 Dickeya zeae Ech1591 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YP_003003930.1 1818379 R 561229 CDS YP_003003931.1 251789210 8118119 complement(1818988..1820718) 1 NC_012912.1 KEGG: eca:ECA1749 hypothetical protein; hypothetical protein 1820718 8118119 Dd1591_1598 Dickeya zeae Ech1591 hypothetical protein YP_003003931.1 1818988 R 561229 CDS YP_003003932.1 251789211 8118120 1820928..1821401 1 NC_012912.1 PFAM: protein of unknown function DUF1047; KEGG: eca:ECA1750 hypothetical protein; hypothetical protein 1821401 8118120 Dd1591_1599 Dickeya zeae Ech1591 hypothetical protein YP_003003932.1 1820928 D 561229 CDS YP_003003933.1 251789212 8118121 complement(1821663..1821848) 1 NC_012912.1 KEGG: eca:ECA1771 hypothetical protein; hypothetical protein 1821848 8118121 Dd1591_1600 Dickeya zeae Ech1591 hypothetical protein YP_003003933.1 1821663 R 561229 CDS YP_003003934.1 251789213 8118122 1822455..1822730 1 NC_012912.1 KEGG: eca:ECA1773 hypothetical protein; hypothetical protein 1822730 8118122 Dd1591_1601 Dickeya zeae Ech1591 hypothetical protein YP_003003934.1 1822455 D 561229 CDS YP_003003935.1 251789214 8118123 1824005..1825669 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1774 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1825669 8118123 Dd1591_1602 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003003935.1 1824005 D 561229 CDS YP_003003936.1 251789215 8118124 complement(1825801..1827288) 1 NC_012912.1 KEGG: eca:ECA1775 putative iron-regulated membrane protein; putative iron-regulated membrane protein 1827288 8118124 Dd1591_1603 Dickeya zeae Ech1591 putative iron-regulated membrane protein YP_003003936.1 1825801 R 561229 CDS YP_003003937.1 251789216 8118125 1828259..1829827 1 NC_012912.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1829827 mdoG 8118125 mdoG Dickeya zeae Ech1591 glucan biosynthesis protein G YP_003003937.1 1828259 D 561229 CDS YP_003003938.1 251789217 8118126 1829820..1832369 1 NC_012912.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 1832369 8118126 Dd1591_1605 Dickeya zeae Ech1591 glucosyltransferase MdoH YP_003003938.1 1829820 D 561229 CDS YP_003003939.1 251789218 8118127 complement(1832628..1833548) 1 NC_012912.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: eca:ECA1779 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1833548 8118127 Dd1591_1606 Dickeya zeae Ech1591 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_003003939.1 1832628 R 561229 CDS YP_003003940.1 251789219 8118129 1834173..1835234 1 NC_012912.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: spe:Spro_1886 hypothetical protein; Rhodanese domain-containing protein 1835234 8118129 Dd1591_1608 Dickeya zeae Ech1591 Rhodanese domain-containing protein YP_003003940.1 1834173 D 561229 CDS YP_003003941.1 251789220 8118130 complement(1835276..1835854) 1 NC_012912.1 PFAM: YceI family protein; KEGG: sfx:S1140 hypothetical protein; YceI family protein 1835854 8118130 Dd1591_1609 Dickeya zeae Ech1591 YceI family protein YP_003003941.1 1835276 R 561229 CDS YP_003003942.1 251789221 8118131 complement(1835884..1836438) 1 NC_012912.1 PFAM: cytochrome B561; KEGG: eca:ECA1783 hypothetical protein; cytochrome B561 1836438 8118131 Dd1591_1610 Dickeya zeae Ech1591 cytochrome B561 YP_003003942.1 1835884 R 561229 CDS YP_003003943.1 251789222 8118132 complement(1836789..1837043) 1 NC_012912.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS 1837043 bssS 8118132 bssS Dickeya zeae Ech1591 biofilm formation regulatory protein BssS YP_003003943.1 1836789 R 561229 CDS YP_003003944.1 251789223 8118133 complement(1837360..1837602) 1 NC_012912.1 PFAM: DinI family protein; KEGG: eca:ECA1786 DNA damage-inducible protein I; DinI family protein 1837602 8118133 Dd1591_1612 Dickeya zeae Ech1591 DinI family protein YP_003003944.1 1837360 R 561229 CDS YP_003003945.1 251789224 8118134 complement(1837705..1838748) 1 NC_012912.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1838748 8118134 Dd1591_1613 Dickeya zeae Ech1591 dihydroorotase YP_003003945.1 1837705 R 561229 CDS YP_003003946.1 251789225 8118135 1838927..1839214 1 NC_012912.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: eca:ECA1788 hypothetical protein; antibiotic biosynthesis monooxygenase 1839214 8118135 Dd1591_1614 Dickeya zeae Ech1591 antibiotic biosynthesis monooxygenase YP_003003946.1 1838927 D 561229 CDS YP_003003947.1 251789226 8118136 complement(1839286..1842462) 1 NC_012912.1 KEGG: eca:ECA1789 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family 1842462 8118136 Dd1591_1615 Dickeya zeae Ech1591 ribonuclease, Rne/Rng family YP_003003947.1 1839286 R 561229 CDS YP_003003948.1 251789227 8118137 1843042..1844004 1 NC_012912.1 KEGG: eca:ECA1790 23S rRNA pseudouridylate synthase C; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase, RluA family 1844004 8118137 Dd1591_1616 Dickeya zeae Ech1591 pseudouridine synthase, RluA family YP_003003948.1 1843042 D 561229 CDS YP_003003949.1 251789228 8118138 complement(1844101..1844703) 1 NC_012912.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: eca:ECA1791 Maf-like protein; maf protein 1844703 8118138 Dd1591_1617 Dickeya zeae Ech1591 maf protein YP_003003949.1 1844101 R 561229 CDS YP_003003950.1 251789229 8118139 1844846..1845367 1 NC_012912.1 PFAM: protein of unknown function DUF177; KEGG: eca:ECA1792 hypothetical protein; hypothetical protein 1845367 8118139 Dd1591_1618 Dickeya zeae Ech1591 hypothetical protein YP_003003950.1 1844846 D 561229 CDS YP_003003951.1 251789230 8118140 1845384..1845554 1 NC_012912.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1845554 rpmF 8118140 rpmF Dickeya zeae Ech1591 50S ribosomal protein L32 YP_003003951.1 1845384 D 561229 CDS YP_003003952.1 251789231 8118141 1845581..1846627 1 NC_012912.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1846627 8118141 Dd1591_1620 Dickeya zeae Ech1591 putative glycerol-3-phosphate acyltransferase PlsX YP_003003952.1 1845581 D 561229 CDS YP_003003953.1 251789232 8118142 1846634..1847584 1 NC_012912.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 1847584 8118142 Dd1591_1621 Dickeya zeae Ech1591 3-oxoacyl-(acyl carrier protein) synthase III YP_003003953.1 1846634 D 561229 CDS YP_003003954.1 251789233 8118143 1847604..1848533 1 NC_012912.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: eca:ECA1796 acyl carrier protein S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 1848533 8118143 Dd1591_1622 Dickeya zeae Ech1591 malonyl CoA-acyl carrier protein transacylase YP_003003954.1 1847604 D 561229 CDS YP_003003955.1 251789234 8118144 1848547..1849281 1 NC_012912.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA1797 3-ketoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 1849281 8118144 Dd1591_1623 Dickeya zeae Ech1591 3-oxoacyl-ACP reductase YP_003003955.1 1848547 D 561229 CDS YP_003003956.1 251789235 8118145 1849436..1849672 1 NC_012912.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1849672 acpP 8118145 acpP Dickeya zeae Ech1591 acyl carrier protein YP_003003956.1 1849436 D 561229 CDS YP_003003957.1 251789236 8118146 1849755..1850993 1 NC_012912.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1850993 8118146 Dd1591_1625 Dickeya zeae Ech1591 3-oxoacyl-(acyl carrier protein) synthase II YP_003003957.1 1849755 D 561229 CDS YP_003003958.1 251789237 8117827 1851115..1851918 1 NC_012912.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 1851918 8117827 Dd1591_1626 Dickeya zeae Ech1591 4-amino-4-deoxychorismate lyase YP_003003958.1 1851115 D 561229 CDS YP_003003959.1 251789238 8117828 1851925..1852956 1 NC_012912.1 PFAM: aminodeoxychorismate lyase; KEGG: eca:ECA1801 aminodeoxychorismate lyase; aminodeoxychorismate lyase 1852956 8117828 Dd1591_1627 Dickeya zeae Ech1591 aminodeoxychorismate lyase YP_003003959.1 1851925 D 561229 CDS YP_003003960.1 251789239 8117829 1852949..1853596 1 NC_012912.1 KEGG: ypi:YpsIP31758_1583 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 1853596 8117829 Dd1591_1628 Dickeya zeae Ech1591 thymidylate kinase YP_003003960.1 1852949 D 561229 CDS YP_003003961.1 251789240 8117830 1853604..1854614 1 NC_012912.1 KEGG: eca:ECA1803 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III delta subunit; DNA polymerase III subunit delta' 1854614 8117830 Dd1591_1629 Dickeya zeae Ech1591 DNA polymerase III subunit delta' YP_003003961.1 1853604 D 561229 CDS YP_003003962.1 251789241 8117831 1854633..1855427 1 NC_012912.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: eca:ECA1804 putative metallodependent hydrolase; putative metallodependent hydrolase 1855427 8117831 Dd1591_1630 Dickeya zeae Ech1591 putative metallodependent hydrolase YP_003003962.1 1854633 D 561229 CDS YP_003003963.1 251789242 8117832 1855745..1857178 1 NC_012912.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunits IIBC 1857178 8117832 Dd1591_1631 Dickeya zeae Ech1591 PTS system glucose-specific transporter subunits IIBC YP_003003963.1 1855745 D 561229 CDS YP_003003964.1 251789243 8117833 1857480..1858541 1 NC_012912.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: lhk:LHK_00733 malate/L-lactate dehydrogenase; Malate/L-lactate dehydrogenase 1858541 8117833 Dd1591_1632 Dickeya zeae Ech1591 Malate/L-lactate dehydrogenase YP_003003964.1 1857480 D 561229 CDS YP_003003965.1 251789244 8117834 1858656..1859006 1 NC_012912.1 PFAM: histidine triad (HIT) protein; KEGG: eca:ECA1809 purine nucleoside phosphoramidase; purine nucleoside phosphoramidase 1859006 8117834 Dd1591_1633 Dickeya zeae Ech1591 purine nucleoside phosphoramidase YP_003003965.1 1858656 D 561229 CDS YP_003003966.1 251789245 8117835 1859014..1859397 1 NC_012912.1 PFAM: protein of unknown function DUF1425; KEGG: eca:ECA1810 putative lipoprotein; hypothetical protein 1859397 8117835 Dd1591_1634 Dickeya zeae Ech1591 hypothetical protein YP_003003966.1 1859014 D 561229 CDS YP_003003967.1 251789246 8117836 1859419..1860012 1 NC_012912.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: eca:ECA1811 putative lipoprotein; membrane lipoprotein lipid attachment site 1860012 8117836 Dd1591_1635 Dickeya zeae Ech1591 membrane lipoprotein lipid attachment site YP_003003967.1 1859419 D 561229 CDS YP_003003968.1 251789247 8117837 1859990..1860862 1 NC_012912.1 PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA1812 hypothetical protein; Thiamine kinase 1860862 8117837 Dd1591_1636 Dickeya zeae Ech1591 Thiamine kinase YP_003003968.1 1859990 D 561229 CDS YP_003003969.1 251789248 8117838 1860884..1861981 1 NC_012912.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1861981 8117838 Dd1591_1637 Dickeya zeae Ech1591 beta-hexosaminidase YP_003003969.1 1860884 D 561229 CDS YP_003003970.1 251789249 8117839 1862017..1862559 1 NC_012912.1 PFAM: protein of unknown function UPF0227; KEGG: esa:ESA_02236 hypothetical protein; hypothetical protein 1862559 8117839 Dd1591_1638 Dickeya zeae Ech1591 hypothetical protein YP_003003970.1 1862017 D 561229 CDS YP_003003971.1 251789250 8117840 1862853..1864160 1 NC_012912.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA1815 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1864160 8117840 Dd1591_1639 Dickeya zeae Ech1591 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003003971.1 1862853 D 561229 CDS YP_003003972.1 251789251 8117841 1864526..1865065 1 NC_012912.1 PFAM: 17 kDa surface antigen; KEGG: eca:ECA1816 hypothetical protein; hypothetical protein 1865065 8117841 Dd1591_1640 Dickeya zeae Ech1591 hypothetical protein YP_003003972.1 1864526 D 561229 CDS YP_003003973.1 251789252 8117842 complement(1865140..1866213) 1 NC_012912.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA1966 putative transcriptional repressor; LacI family transcriptional regulator 1866213 8117842 Dd1591_1641 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003003973.1 1865140 R 561229 CDS YP_003003974.1 251789253 8117843 1866514..1867812 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1967 putative hexuronate transporter; major facilitator superfamily protein 1867812 8117843 Dd1591_1642 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003003974.1 1866514 D 561229 CDS YP_003003975.1 251789254 8117844 1867841..1870216 1 NC_012912.1 PFAM: glycoside hydrolase family 31; KEGG: eca:ECA1968 putative glycosyl hydrolase; Glucan 1,3-alpha-glucosidase 1870216 8117844 Dd1591_1643 Dickeya zeae Ech1591 Glucan 1,3-alpha-glucosidase YP_003003975.1 1867841 D 561229 CDS YP_003003976.1 251789255 8117845 1870537..1871352 1 NC_012912.1 PFAM: N-acetyltransferase; KEGG: spe:Spro_1338 N-acetyltransferase; N-acetyltransferase 1871352 8117845 Dd1591_1644 Dickeya zeae Ech1591 N-acetyltransferase YP_003003976.1 1870537 D 561229 CDS YP_003003977.1 251789256 8117846 complement(1871407..1872756) 1 NC_012912.1 KEGG: eca:ECA1820 putative chaperone; putative chaperone 1872756 8117846 Dd1591_1645 Dickeya zeae Ech1591 putative chaperone YP_003003977.1 1871407 R 561229 CDS YP_003003978.1 251789257 8117847 complement(1872899..1874404) 1 NC_012912.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: yen:YE1560 hypothetical protein; diguanylate phosphodiesterase 1874404 8117847 Dd1591_1646 Dickeya zeae Ech1591 diguanylate phosphodiesterase YP_003003978.1 1872899 R 561229 CDS YP_003003979.1 251789258 8117848 complement(1874881..1878333) 1 NC_012912.1 KEGG: eca:ECA1821 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; helicase domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 1878333 8117848 Dd1591_1647 Dickeya zeae Ech1591 transcription-repair coupling factor YP_003003979.1 1874881 R 561229 CDS YP_003003980.1 251789259 8117849 1878462..1879667 1 NC_012912.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC 1879667 8117849 Dd1591_1648 Dickeya zeae Ech1591 outer membrane-specific lipoprotein transporter subunit LolC YP_003003980.1 1878462 D 561229 CDS YP_003003981.1 251789260 8117850 1879660..1880367 1 NC_012912.1 outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit 1880367 lolD 8117850 lolD Dickeya zeae Ech1591 lipoprotein transporter ATP-binding subunit YP_003003981.1 1879660 D 561229 CDS YP_003003982.1 251789261 8117851 1880364..1881611 1 NC_012912.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 1881611 8117851 Dd1591_1650 Dickeya zeae Ech1591 outer membrane-specific lipoprotein transporter subunit LolE YP_003003982.1 1880364 D 561229 CDS YP_003003983.1 251789262 8117852 1881679..1882611 1 NC_012912.1 PFAM: ROK family protein; KEGG: yps:YPTB2439 N-acetyl-D-glucosamine kinase; ROK family protein 1882611 8117852 Dd1591_1651 Dickeya zeae Ech1591 ROK family protein YP_003003983.1 1881679 D 561229 CDS YP_003003984.1 251789263 8117853 1882705..1883535 1 NC_012912.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 1883535 8117853 Dd1591_1652 Dickeya zeae Ech1591 NAD-dependent deacetylase YP_003003984.1 1882705 D 561229 CDS YP_003003985.1 251789264 8117854 complement(1883527..1883781) 1 NC_012912.1 KEGG: eca:ECA1828 hypothetical protein; hypothetical protein 1883781 8117854 Dd1591_1653 Dickeya zeae Ech1591 hypothetical protein YP_003003985.1 1883527 R 561229 CDS YP_003003986.1 251789265 8117855 1884036..1885037 1 NC_012912.1 with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease 1885037 8117855 Dd1591_1654 Dickeya zeae Ech1591 vtamin B12-transporter permease YP_003003986.1 1884036 D 561229 CDS YP_003003987.1 251789266 8117856 1885178..1885729 1 NC_012912.1 PFAM: glutathione peroxidase; KEGG: yen:YE2194 putative glutathione peroxidase; Peroxiredoxin 1885729 8117856 Dd1591_1655 Dickeya zeae Ech1591 Peroxiredoxin YP_003003987.1 1885178 D 561229 CDS YP_003003988.1 251789267 8117857 1885792..1886502 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1834 vitamin B12-transporter ATPase; ABC transporter 1886502 8117857 Dd1591_1656 Dickeya zeae Ech1591 ABC transporter YP_003003988.1 1885792 D 561229 CDS YP_003003989.1 251789268 8117858 1886703..1887167 1 NC_012912.1 PFAM: NLP/P60 protein; KEGG: spe:Spro_2161 NLP/P60 protein; NLP/P60 protein 1887167 8117858 Dd1591_1657 Dickeya zeae Ech1591 NLP/P60 protein YP_003003989.1 1886703 D 561229 CDS YP_003003990.1 251789269 8117859 1887609..1888340 1 NC_012912.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: eca:ECA1841 hypothetical protein; diguanylate phosphodiesterase 1888340 8117859 Dd1591_1658 Dickeya zeae Ech1591 diguanylate phosphodiesterase YP_003003990.1 1887609 D 561229 CDS YP_003003991.1 251789270 8117860 1888592..1890043 1 NC_012912.1 PFAM: protein of unknown function UPF0061; KEGG: eca:ECA1842 hypothetical protein; hypothetical protein 1890043 8117860 Dd1591_1659 Dickeya zeae Ech1591 hypothetical protein YP_003003991.1 1888592 D 561229 CDS YP_003003992.1 251789271 8117861 1890391..1892082 1 NC_012912.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: eca:ECA2546 hypothetical protein; hypothetical protein 1892082 8117861 Dd1591_1660 Dickeya zeae Ech1591 hypothetical protein YP_003003992.1 1890391 D 561229 CDS YP_003003993.1 251789272 8117862 1892280..1892828 1 NC_012912.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: eca:ECA2545 hypothetical protein; hypothetical protein 1892828 8117862 Dd1591_1661 Dickeya zeae Ech1591 hypothetical protein YP_003003993.1 1892280 D 561229 CDS YP_003003994.1 251789273 8117863 1892898..1893536 1 NC_012912.1 PFAM: beta-lactamase domain protein; KEGG: eca:ECA2544 putative metallo-beta-lactamase; beta-lactamase domain-containing protein 1893536 8117863 Dd1591_1662 Dickeya zeae Ech1591 beta-lactamase domain-containing protein YP_003003994.1 1892898 D 561229 CDS YP_003003995.1 251789274 8117864 1893845..1896082 1 NC_012912.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aha:AHA_1290 radical SAM domain-containing protein; Radical SAM domain-containing protein 1896082 8117864 Dd1591_1663 Dickeya zeae Ech1591 Radical SAM domain-containing protein YP_003003995.1 1893845 D 561229 CDS YP_003003996.1 251789275 8117865 complement(1896276..1897466) 1 NC_012912.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1897466 8117865 Dd1591_1664 Dickeya zeae Ech1591 aromatic amino acid aminotransferase YP_003003996.1 1896276 R 561229 CDS YP_003003997.1 251789276 8117866 complement(1897728..1898858) 1 NC_012912.1 PFAM: porin Gram-negative type; KEGG: eca:ECA2542 outer membrane protein; porin 1898858 8117866 Dd1591_1665 Dickeya zeae Ech1591 porin YP_003003997.1 1897728 R 561229 CDS YP_003003998.1 251789277 8117867 complement(1899392..1900531) 1 NC_012912.1 PFAM: porin Gram-negative type; KEGG: eca:ECA2542 outer membrane protein; porin 1900531 8117867 Dd1591_1666 Dickeya zeae Ech1591 porin YP_003003998.1 1899392 R 561229 CDS YP_003003999.1 251789278 8117868 complement(1900830..1902230) 1 NC_012912.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1902230 asnC 8117868 asnC Dickeya zeae Ech1591 asparaginyl-tRNA synthetase YP_003003999.1 1900830 R 561229 CDS YP_003004000.1 251789279 8117869 complement(1902409..1903614) 1 NC_012912.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1903614 8117869 Dd1591_1668 Dickeya zeae Ech1591 nicotinate phosphoribosyltransferase YP_003004000.1 1902409 R 561229 CDS YP_003004001.1 251789280 8117870 1904227..1906842 1 NC_012912.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: eca:ECA2539 aminopeptidase N; aminopeptidase N 1906842 pepN 8117870 pepN Dickeya zeae Ech1591 aminopeptidase N YP_003004001.1 1904227 D 561229 CDS YP_003004002.1 251789281 8117871 1907063..1909912 1 NC_012912.1 KEGG: lhk:LHK_01781 ATPases with chaperone activity, ATP-binding subunit; hypothetical protein 1909912 8117871 Dd1591_1670 Dickeya zeae Ech1591 hypothetical protein YP_003004002.1 1907063 D 561229 CDS YP_003004003.1 251789282 8117872 1909922..1912375 1 NC_012912.1 KEGG: lhk:LHK_01780 hypothetical protein; hypothetical protein 1912375 8117872 Dd1591_1671 Dickeya zeae Ech1591 hypothetical protein YP_003004003.1 1909922 D 561229 CDS YP_003004004.1 251789283 8117873 complement(1912429..1913232) 1 NC_012912.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit 1913232 ssuB 8117873 ssuB Dickeya zeae Ech1591 aliphatic sulfonates transport ATP-binding subunit YP_003004004.1 1912429 R 561229 CDS YP_003004005.1 251789284 8117874 complement(1913229..1914020) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esa:ESA_02406 alkanesulfonate transporter permease subunit; binding-protein-dependent transport systems inner membrane component 1914020 8117874 Dd1591_1673 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004005.1 1913229 R 561229 CDS YP_003004006.1 251789285 8117875 complement(1914031..1915179) 1 NC_012912.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1915179 8117875 Dd1591_1674 Dickeya zeae Ech1591 alkanesulfonate monooxygenase YP_003004006.1 1914031 R 561229 CDS YP_003004007.1 251789286 8117876 complement(1915211..1916170) 1 NC_012912.1 KEGG: spe:Spro_1738 alkanesulfonate transporter substrate-binding subunit; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 1916170 8117876 Dd1591_1675 Dickeya zeae Ech1591 aliphatic sulfonate ABC transporter substrate-binding protein YP_003004007.1 1915211 R 561229 CDS YP_003004008.1 251789287 8117877 complement(1916198..1916752) 1 NC_012912.1 PFAM: NADPH-dependent FMN reductase; KEGG: kpe:KPK_3595 NADPH-dependent FMN reductase; NAD(P)H-dependent FMN reductase 1916752 8117877 Dd1591_1676 Dickeya zeae Ech1591 NAD(P)H-dependent FMN reductase YP_003004008.1 1916198 R 561229 CDS YP_003004009.1 251789288 8117878 1917211..1918218 1 NC_012912.1 KEGG: eca:ECA2538 dihydroorotate dehydrogenase 2; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 1918218 8117878 Dd1591_1677 Dickeya zeae Ech1591 dihydroorotate dehydrogenase YP_003004009.1 1917211 D 561229 CDS YP_003004010.1 251789289 8117879 1918495..1919049 1 NC_012912.1 PFAM: protein of unknown function DUF1379; KEGG: eca:ECA2537 hypothetical protein; hypothetical protein 1919049 8117879 Dd1591_1678 Dickeya zeae Ech1591 hypothetical protein YP_003004010.1 1918495 D 561229 CDS YP_003004011.1 251789290 8117880 complement(1919136..1920239) 1 NC_012912.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: spe:Spro_1742 MOSC domain-containing protein; MOSC domain-containing protein 1920239 8117880 Dd1591_1679 Dickeya zeae Ech1591 MOSC domain-containing protein YP_003004011.1 1919136 R 561229 CDS YP_003004012.1 251789291 8117881 1920420..1922543 1 NC_012912.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1922543 rlmL 8117881 rlmL Dickeya zeae Ech1591 23S rRNA m(2)G2445 methyltransferase YP_003004012.1 1920420 D 561229 CDS YP_003004013.1 251789292 8117882 1922549..1924498 1 NC_012912.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1924498 8117882 Dd1591_1681 Dickeya zeae Ech1591 ABC transporter ATPase YP_003004013.1 1922549 D 561229 CDS YP_003004014.1 251789293 8117883 1924644..1925912 1 NC_012912.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: eca:ECA2533 paraquat-inducible protein A; integral membrane protein, PqiA family 1925912 8117883 Dd1591_1682 Dickeya zeae Ech1591 integral membrane protein, PqiA family YP_003004014.1 1924644 D 561229 CDS YP_003004015.1 251789294 8117884 1925899..1927545 1 NC_012912.1 PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA2532 paraquat-inducible protein B; paraquat-inducible protein B 1927545 8117884 Dd1591_1683 Dickeya zeae Ech1591 paraquat-inducible protein B YP_003004015.1 1925899 D 561229 CDS YP_003004016.1 251789295 8117885 1927545..1928105 1 NC_012912.1 PFAM: protein of unknown function DUF330; KEGG: eca:ECA2531 putative lipoprotein; hypothetical protein 1928105 8117885 Dd1591_1684 Dickeya zeae Ech1591 hypothetical protein YP_003004016.1 1927545 D 561229 CDS YP_003004017.1 251789296 8117886 1928397..1928564 1 NC_012912.1 PFAM: ribosome modulation factor; KEGG: yps:YPTB1448 putative ribosome modulation factor; ribosome modulation factor 1928564 8117886 Dd1591_1685 Dickeya zeae Ech1591 ribosome modulation factor YP_003004017.1 1928397 D 561229 CDS YP_003004018.1 251789297 8117887 complement(1928659..1929711) 1 NC_012912.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 1929711 8117887 Dd1591_1686 Dickeya zeae Ech1591 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003004018.1 1928659 R 561229 CDS YP_003004019.1 251789298 8117888 1929764..1929898 1 NC_012912.1 hypothetical protein 1929898 8117888 Dd1591_1687 Dickeya zeae Ech1591 hypothetical protein YP_003004019.1 1929764 D 561229 CDS YP_003004020.1 251789299 8117889 complement(1929895..1930716) 1 NC_012912.1 PFAM: protein of unknown function DUF299; KEGG: eca:ECA1852 hypothetical protein; hypothetical protein 1930716 8117889 Dd1591_1688 Dickeya zeae Ech1591 hypothetical protein YP_003004020.1 1929895 R 561229 CDS YP_003004021.1 251789300 8117890 1931033..1933411 1 NC_012912.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1933411 8117890 Dd1591_1689 Dickeya zeae Ech1591 phosphoenolpyruvate synthase YP_003004021.1 1931033 D 561229 CDS YP_003004022.1 251789301 8117891 complement(1933908..1935020) 1 NC_012912.1 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; putative inner membrane protein 1935020 8117891 Dd1591_1690 Dickeya zeae Ech1591 putative inner membrane protein YP_003004022.1 1933908 R 561229 CDS YP_003004023.1 251789302 8117892 1935359..1938418 1 NC_012912.1 PFAM: FAD linked oxidase domain protein; KEGG: eca:ECA1856 putative FAD-binding oxidase; FAD linked oxidase domain-containing protein 1938418 8117892 Dd1591_1691 Dickeya zeae Ech1591 FAD linked oxidase domain-containing protein YP_003004023.1 1935359 D 561229 CDS YP_003004024.1 251789303 8117893 1938418..1938840 1 NC_012912.1 PFAM: thioesterase superfamily protein; KEGG: eca:ECA1857 hypothetical protein; thioesterase superfamily protein 1938840 8117893 Dd1591_1692 Dickeya zeae Ech1591 thioesterase superfamily protein YP_003004024.1 1938418 D 561229 CDS YP_003004025.1 251789304 8117894 complement(1938909..1939310) 1 NC_012912.1 KEGG: eca:ECA1858 hypothetical protein; hypothetical protein 1939310 8117894 Dd1591_1693 Dickeya zeae Ech1591 hypothetical protein YP_003004025.1 1938909 R 561229 CDS YP_003004026.1 251789305 8117895 1939859..1940233 1 NC_012912.1 TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: eca:ECA1859 iron-sulfur cluster assembly scaffold protein; FeS assembly scaffold SufA 1940233 8117895 Dd1591_1694 Dickeya zeae Ech1591 FeS assembly scaffold SufA YP_003004026.1 1939859 D 561229 CDS YP_003004027.1 251789306 8117896 1940248..1941747 1 NC_012912.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 1941747 8117896 Dd1591_1695 Dickeya zeae Ech1591 cysteine desulfurase activator complex subunit SufB YP_003004027.1 1940248 D 561229 CDS YP_003004028.1 251789307 8117897 1941835..1942581 1 NC_012912.1 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase ATPase component 1942581 sufC 8117897 sufC Dickeya zeae Ech1591 cysteine desulfurase ATPase component YP_003004028.1 1941835 D 561229 CDS YP_003004029.1 251789308 8117898 1942556..1943848 1 NC_012912.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: eca:ECA1862 cysteine desulfurase activator complex subunit SufD; FeS assembly protein SufD 1943848 8117898 Dd1591_1697 Dickeya zeae Ech1591 FeS assembly protein SufD YP_003004029.1 1942556 D 561229 CDS YP_003004030.1 251789309 8117899 1943845..1945098 1 NC_012912.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: eca:ECA1863 selenocysteine lyase; SufS subfamily cysteine desulfurase 1945098 8117899 Dd1591_1698 Dickeya zeae Ech1591 SufS subfamily cysteine desulfurase YP_003004030.1 1943845 D 561229 CDS YP_003004031.1 251789310 8117900 1945137..1945583 1 NC_012912.1 Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE 1945583 8117900 Dd1591_1699 Dickeya zeae Ech1591 cysteine desufuration protein SufE YP_003004031.1 1945137 D 561229 CDS YP_003004032.1 251789311 8117901 1945825..1946826 1 NC_012912.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eca:ECA1865 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1946826 8117901 Dd1591_1700 Dickeya zeae Ech1591 ErfK/YbiS/YcfS/YnhG family protein YP_003004032.1 1945825 D 561229 CDS YP_003004033.1 251789312 8117902 complement(1946998..1947234) 1 NC_012912.1 PFAM: LPP repeat-containing protein; KEGG: eca:ECA1866 major outer membrane lipoprotein; LPP repeat-containing protein 1947234 8117902 Dd1591_1701 Dickeya zeae Ech1591 LPP repeat-containing protein YP_003004033.1 1946998 R 561229 CDS YP_003004034.1 251789313 8117903 complement(1947542..1948954) 1 NC_012912.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1948954 8117903 Dd1591_1702 Dickeya zeae Ech1591 pyruvate kinase YP_003004034.1 1947542 R 561229 CDS YP_003004035.1 251789314 8117904 1949933..1950784 1 NC_012912.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA1869 beta-glucoside operon antiterminator; transcriptional antiterminator BglG 1950784 8117904 Dd1591_1703 Dickeya zeae Ech1591 transcriptional antiterminator BglG YP_003004035.1 1949933 D 561229 CDS YP_003004036.1 251789315 8117905 1951078..1952988 1 NC_012912.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system beta-glucoside-specific transporter subunits IIABC 1952988 8117905 Dd1591_1704 Dickeya zeae Ech1591 PTS system beta-glucoside-specific transporter subunits IIABC YP_003004036.1 1951078 D 561229 CDS YP_003004037.1 251789316 8117906 1953021..1954418 1 NC_012912.1 PFAM: glycoside hydrolase family 1; KEGG: eca:ECA1871 6-phospho-beta-glucosidase; glycoside hydrolase family 1 1954418 8117906 Dd1591_1705 Dickeya zeae Ech1591 glycoside hydrolase family 1 YP_003004037.1 1953021 D 561229 CDS YP_003004038.1 251789317 8116787 1954596..1956194 1 NC_012912.1 PFAM: porin LamB type; KEGG: efe:EFER_4018 carbohydrate-specific outer membrane porin, cryptic; porin LamB type 1956194 8116787 Dd1591_1706 Dickeya zeae Ech1591 porin LamB type YP_003004038.1 1954596 D 561229 CDS YP_003004039.1 251789318 8116788 1956253..1957437 1 NC_012912.1 PFAM: putative esterase; glycoside hydrolase family 13 domain protein; KEGG: eca:ECA1873 putative glycosyl hydrolase exoenzyme; putative esterase 1957437 8116788 Dd1591_1707 Dickeya zeae Ech1591 putative esterase YP_003004039.1 1956253 D 561229 CDS YP_003004040.1 251789319 8116789 complement(1957823..1958017) 1 NC_012912.1 KEGG: pla:Plav_3399 hypothetical protein; hypothetical protein 1958017 8116789 Dd1591_1708 Dickeya zeae Ech1591 hypothetical protein YP_003004040.1 1957823 R 561229 CDS YP_003004041.1 251789320 8116790 complement(1958322..1958777) 1 NC_012912.1 KEGG: bid:Bind_1489 hypothetical protein; hypothetical protein 1958777 8116790 Dd1591_1709 Dickeya zeae Ech1591 hypothetical protein YP_003004041.1 1958322 R 561229 CDS YP_003004042.1 251789321 8116791 complement(1958818..1959660) 1 NC_012912.1 PFAM: NmrA family protein; KEGG: rpd:RPD_2341 NmrA-like; NmrA family protein 1959660 8116791 Dd1591_1710 Dickeya zeae Ech1591 NmrA family protein YP_003004042.1 1958818 R 561229 CDS YP_003004043.1 251789322 8116792 1959763..1960686 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rlt:Rleg2_6348 transcriptional regulator, AraC family; AraC family transcriptional regulator 1960686 8116792 Dd1591_1711 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003004043.1 1959763 D 561229 CDS YP_003004044.1 251789323 8116795 complement(1961789..1963162) 1 NC_012912.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 1963162 8116795 Dd1591_1712 Dickeya zeae Ech1591 multidrug efflux protein YP_003004044.1 1961789 R 561229 CDS YP_003004045.1 251789324 8116796 1963551..1964204 1 NC_012912.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1964204 8116796 Dd1591_1713 Dickeya zeae Ech1591 riboflavin synthase subunit alpha YP_003004045.1 1963551 D 561229 CDS YP_003004046.1 251789325 8116797 complement(1964301..1965452) 1 NC_012912.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane fatty acyl phospholipid synthase 1965452 8116797 Dd1591_1714 Dickeya zeae Ech1591 cyclopropane fatty acyl phospholipid synthase YP_003004046.1 1964301 R 561229 CDS YP_003004047.1 251789326 8116798 complement(1965872..1966897) 1 NC_012912.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR 1966897 8116798 Dd1591_1715 Dickeya zeae Ech1591 DNA-binding transcriptional repressor PurR YP_003004047.1 1965872 R 561229 CDS YP_003004048.1 251789327 8116799 1967253..1967372 1 NC_012912.1 hypothetical protein 1967372 8116799 Dd1591_1716 Dickeya zeae Ech1591 hypothetical protein YP_003004048.1 1967253 D 561229 CDS YP_003004049.1 251789328 8116800 complement(1967504..1968478) 1 NC_012912.1 PFAM: NLP/P60 protein; KEGG: eca:ECA1926 hypothetical protein; NLP/P60 protein 1968478 8116800 Dd1591_1717 Dickeya zeae Ech1591 NLP/P60 protein YP_003004049.1 1967504 R 561229 CDS YP_003004050.1 251789329 8116801 1968809..1969159 1 NC_012912.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: eca:ECA1927 hypothetical protein; hypothetical protein 1969159 8116801 Dd1591_1718 Dickeya zeae Ech1591 hypothetical protein YP_003004050.1 1968809 D 561229 CDS YP_003004051.1 251789330 8116802 complement(1969261..1969941) 1 NC_012912.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 1969941 8116802 Dd1591_1719 Dickeya zeae Ech1591 ribonuclease T YP_003004051.1 1969261 R 561229 CDS YP_003004052.1 251789331 8116803 complement(1970073..1970480) 1 NC_012912.1 KEGG: spe:Spro_2200 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 1970480 8116803 Dd1591_1720 Dickeya zeae Ech1591 lactoylglutathione lyase YP_003004052.1 1970073 R 561229 CDS YP_003004053.1 251789332 8116805 1971158..1971595 1 NC_012912.1 Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA 1971595 8116805 Dd1591_1722 Dickeya zeae Ech1591 transcriptional regulator SlyA YP_003004053.1 1971158 D 561229 CDS YP_003004054.1 251789333 8116806 complement(1972020..1972487) 1 NC_012912.1 PFAM: 17 kDa surface antigen; KEGG: eca:ECA1932 outer membrane lipoprotein; 17 kDa surface antigen 1972487 8116806 Dd1591_1723 Dickeya zeae Ech1591 17 kDa surface antigen YP_003004054.1 1972020 R 561229 CDS YP_003004055.1 251789334 8116807 1972826..1973938 1 NC_012912.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1973938 anmK 8116807 anmK Dickeya zeae Ech1591 anhydro-N-acetylmuramic acid kinase YP_003004055.1 1972826 D 561229 CDS YP_003004056.1 251789335 8116808 1974045..1974353 1 NC_012912.1 KEGG: eca:ECA1934 putative lipoprotein; putative lipoprotein 1974353 8116808 Dd1591_1725 Dickeya zeae Ech1591 putative lipoprotein YP_003004056.1 1974045 D 561229 CDS YP_003004057.1 251789336 8116809 1974468..1975166 1 NC_012912.1 KEGG: eca:ECA1935 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 1975166 8116809 Dd1591_1726 Dickeya zeae Ech1591 pyridoxamine 5'-phosphate oxidase YP_003004057.1 1974468 D 561229 CDS YP_003004058.1 251789337 8116810 1975308..1976582 1 NC_012912.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1976582 8116810 Dd1591_1727 Dickeya zeae Ech1591 tyrosyl-tRNA synthetase YP_003004058.1 1975308 D 561229 CDS YP_003004059.1 251789338 8116811 1976793..1977653 1 NC_012912.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1977653 8116811 Dd1591_1728 Dickeya zeae Ech1591 pyridoxamine kinase YP_003004059.1 1976793 D 561229 CDS YP_003004060.1 251789339 8116812 complement(1977743..1978357) 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: eca:ECA1938 glutathione S-transferase; Glutathione S-transferase domain-containing protein 1978357 8116812 Dd1591_1729 Dickeya zeae Ech1591 Glutathione S-transferase domain-containing protein YP_003004060.1 1977743 R 561229 CDS YP_003004061.1 251789340 8116813 1978805..1981498 1 NC_012912.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: eca:ECA1941 aconitate hydratase; aconitate hydratase 1 1981498 8116813 Dd1591_1730 Dickeya zeae Ech1591 aconitate hydratase 1 YP_003004061.1 1978805 D 561229 CDS YP_003004062.1 251789341 8116814 1981684..1983303 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1942 putative periplasmic oligopeptide-binding protein; extracellular solute-binding protein family 5 1983303 8116814 Dd1591_1731 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004062.1 1981684 D 561229 CDS YP_003004063.1 251789342 8116815 complement(1983348..1983941) 1 NC_012912.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 1983941 ribA 8116815 ribA Dickeya zeae Ech1591 GTP cyclohydrolase II YP_003004063.1 1983348 R 561229 CDS YP_003004064.1 251789343 8116816 1984195..1984968 1 NC_012912.1 KEGG: eca:ECA1944 phosphatidylglycerophosphatase B; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphatidylglycerophosphatase B 1984968 8116816 Dd1591_1733 Dickeya zeae Ech1591 phosphatidylglycerophosphatase B YP_003004064.1 1984195 D 561229 CDS YP_003004065.1 251789344 8116817 1985215..1985523 1 NC_012912.1 PFAM: protein of unknown function DUF1049; KEGG: eca:ECA1955 hypothetical protein; hypothetical protein 1985523 8116817 Dd1591_1734 Dickeya zeae Ech1591 hypothetical protein YP_003004065.1 1985215 D 561229 CDS YP_003004066.1 251789345 8116818 1985535..1986704 1 NC_012912.1 SMART: Tetratricopeptide domain protein; KEGG: eca:ECA1956 hypothetical protein; hypothetical protein 1986704 8116818 Dd1591_1735 Dickeya zeae Ech1591 hypothetical protein YP_003004066.1 1985535 D 561229 CDS YP_003004067.1 251789346 8116819 1986883..1987617 1 NC_012912.1 KEGG: eta:ETA_16210 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 1987617 8116819 Dd1591_1736 Dickeya zeae Ech1591 orotidine 5'-phosphate decarboxylase YP_003004067.1 1986883 D 561229 CDS YP_003004068.1 251789347 8116820 1987617..1987943 1 NC_012912.1 TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1; KEGG: eum:ECUMN_1585 hypothetical protein; translation initiation factor SUI1 1987943 8116820 Dd1591_1737 Dickeya zeae Ech1591 translation initiation factor SUI1 YP_003004068.1 1987617 D 561229 CDS YP_003004069.1 251789348 8116821 complement(1988468..1988683) 1 NC_012912.1 KEGG: ent:Ent638_2185 lipoprotein; lipoprotein 1988683 8116821 Dd1591_1738 Dickeya zeae Ech1591 lipoprotein YP_003004069.1 1988468 R 561229 CDS YP_003004070.1 251789349 8116822 1989014..1989709 1 NC_012912.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 1989709 araD 8116822 araD Dickeya zeae Ech1591 L-ribulose-5-phosphate 4-epimerase YP_003004070.1 1989014 D 561229 CDS YP_003004071.1 251789350 8116823 1990068..1991081 1 NC_012912.1 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 1991081 8116823 Dd1591_1740 Dickeya zeae Ech1591 2-keto-3-deoxygluconate permease YP_003004071.1 1990068 D 561229 CDS YP_003004072.1 251789351 8116824 complement(1991198..1993264) 1 NC_012912.1 PFAM: carbon starvation protein CstA; KEGG: eca:ECA1961 carbon starvation protein; carbon starvation protein CstA 1993264 8116824 Dd1591_1741 Dickeya zeae Ech1591 carbon starvation protein CstA YP_003004072.1 1991198 R 561229 CDS YP_003004073.1 251789352 8116825 complement(1993658..1994575) 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: eca:ECA1962 putative oxidoreductase; aldo/keto reductase 1994575 8116825 Dd1591_1742 Dickeya zeae Ech1591 aldo/keto reductase YP_003004073.1 1993658 R 561229 CDS YP_003004074.1 251789353 8116826 complement(1994679..1996610) 1 NC_012912.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 1996610 8116826 Dd1591_1743 Dickeya zeae Ech1591 exoribonuclease II YP_003004074.1 1994679 R 561229 CDS YP_003004075.1 251789354 8116827 complement(1996751..1997224) 1 NC_012912.1 KEGG: nmn:NMCC_0222 putative inner membrane protein; putative inner membrane protein 1997224 8116827 Dd1591_1744 Dickeya zeae Ech1591 putative inner membrane protein YP_003004075.1 1996751 R 561229 CDS YP_003004076.1 251789355 8116828 complement(1997211..1997417) 1 NC_012912.1 hypothetical protein 1997417 8116828 Dd1591_1745 Dickeya zeae Ech1591 hypothetical protein YP_003004076.1 1997211 R 561229 CDS YP_003004077.1 251789356 8116829 complement(1997602..1999911) 1 NC_012912.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: eca:ECA1964 putative molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 1999911 8116829 Dd1591_1746 Dickeya zeae Ech1591 oxidoreductase alpha (molybdopterin) subunit YP_003004077.1 1997602 R 561229 CDS YP_003004078.1 251789357 8116830 complement(2000206..2000997) 1 NC_012912.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 2000997 8116830 Dd1591_1747 Dickeya zeae Ech1591 enoyl-(acyl carrier protein) reductase YP_003004078.1 2000206 R 561229 CDS YP_003004079.1 251789358 8116831 complement(2001182..2001997) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1973 peptide transport system ATP-binding protein; ABC transporter 2001997 8116831 Dd1591_1748 Dickeya zeae Ech1591 ABC transporter YP_003004079.1 2001182 R 561229 CDS YP_003004080.1 251789359 8116832 complement(2001997..2002989) 1 NC_012912.1 KEGG: eca:ECA1974 peptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase 2002989 8116832 Dd1591_1749 Dickeya zeae Ech1591 peptide ABC transporter ATPase YP_003004080.1 2001997 R 561229 CDS YP_003004081.1 251789360 8116833 complement(2003005..2003895) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1975 peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 2003895 8116833 Dd1591_1750 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004081.1 2003005 R 561229 CDS YP_003004082.1 251789361 8116834 complement(2003882..2004847) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1976 peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 2004847 8116834 Dd1591_1751 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004082.1 2003882 R 561229 CDS YP_003004083.1 251789362 8116835 complement(2004844..2006592) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1977 peptide transport periplasmic protein; extracellular solute-binding protein family 5 2006592 8116835 Dd1591_1752 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004083.1 2004844 R 561229 CDS YP_003004084.1 251789363 8116836 complement(2006728..2007720) 1 NC_012912.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2007720 pspF 8116836 pspF Dickeya zeae Ech1591 phage shock protein operon transcriptional activator YP_003004084.1 2006728 R 561229 CDS YP_003004085.1 251789364 8116837 2007940..2008605 1 NC_012912.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA 2008605 8116837 Dd1591_1754 Dickeya zeae Ech1591 phage shock protein PspA YP_003004085.1 2007940 D 561229 CDS YP_003004086.1 251789365 8116838 2008669..2008896 1 NC_012912.1 TIGRFAM: phage shock protein B; PFAM: shock B family protein; KEGG: eca:ECA1984 phage shock protein B; phage shock protein B 2008896 8116838 Dd1591_1755 Dickeya zeae Ech1591 phage shock protein B YP_003004086.1 2008669 D 561229 CDS YP_003004087.1 251789366 8116839 2008896..2009255 1 NC_012912.1 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC 2009255 8116839 Dd1591_1756 Dickeya zeae Ech1591 DNA-binding transcriptional activator PspC YP_003004087.1 2008896 D 561229 CDS YP_003004088.1 251789367 8116840 2009403..2010818 1 NC_012912.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: eca:ECA1986 hypothetical protein; hypothetical protein 2010818 8116840 Dd1591_1757 Dickeya zeae Ech1591 hypothetical protein YP_003004088.1 2009403 D 561229 CDS YP_003004089.1 251789368 8116841 2010815..2011894 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA1987 hypothetical protein; hypothetical protein 2011894 8116841 Dd1591_1758 Dickeya zeae Ech1591 hypothetical protein YP_003004089.1 2010815 D 561229 CDS YP_003004090.1 251789369 8116842 2012138..2013556 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: spe:Spro_3193 major facilitator transporter; major facilitator superfamily protein 2013556 8116842 Dd1591_1759 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003004090.1 2012138 D 561229 CDS YP_003004091.1 251789370 8116843 2013956..2015518 1 NC_012912.1 PFAM: peptidase dimerisation domain protein; KEGG: eca:ECA1988 putative peptidase; peptidase dimerisation domain-containing protein 2015518 8116843 Dd1591_1760 Dickeya zeae Ech1591 peptidase dimerisation domain-containing protein YP_003004091.1 2013956 D 561229 CDS YP_003004092.1 251789371 8116844 2015591..2017201 1 NC_012912.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR 2017201 8116844 Dd1591_1761 Dickeya zeae Ech1591 DNA-binding transcriptional regulator TyrR YP_003004092.1 2015591 D 561229 CDS YP_003004093.1 251789372 8116845 complement(2017291..2017518) 1 NC_012912.1 hypothetical protein 2017518 8116845 Dd1591_1762 Dickeya zeae Ech1591 hypothetical protein YP_003004093.1 2017291 R 561229 CDS YP_003004094.1 251789373 8116846 2017766..2018035 1 NC_012912.1 hypothetical protein 2018035 8116846 Dd1591_1763 Dickeya zeae Ech1591 hypothetical protein YP_003004094.1 2017766 D 561229 CDS YP_003004095.1 251789374 8116847 complement(2018135..2018683) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0446 putative acetyltransferase; GCN5-related N-acetyltransferase 2018683 8116847 Dd1591_1764 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003004095.1 2018135 R 561229 CDS YP_003004096.1 251789375 8116848 2018805..2021138 1 NC_012912.1 PFAM: peptidase S45 penicillin amidase; KEGG: bpl:BURPS1106A_0792 putative penicillin amidase; peptidase S45 penicillin amidase 2021138 8116848 Dd1591_1765 Dickeya zeae Ech1591 peptidase S45 penicillin amidase YP_003004096.1 2018805 D 561229 CDS YP_003004097.1 251789376 8116849 complement(2021157..2022077) 1 NC_012912.1 SMART: helix-turn-helix domain protein; KEGG: pap:PSPA7_4128 hypothetical protein; helix-turn-helix domain-containing protein 2022077 8116849 Dd1591_1766 Dickeya zeae Ech1591 helix-turn-helix domain-containing protein YP_003004097.1 2021157 R 561229 CDS YP_003004098.1 251789377 8116850 2022206..2023627 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA1262 major facilitator transporter; major facilitator superfamily protein 2023627 8116850 Dd1591_1767 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003004098.1 2022206 D 561229 CDS YP_003004099.1 251789378 8116851 complement(2023711..2024214) 1 NC_012912.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2024214 tpx 8116851 tpx Dickeya zeae Ech1591 thiol peroxidase YP_003004099.1 2023711 R 561229 CDS YP_003004100.1 251789379 8116852 complement(2024270..2025001) 1 NC_012912.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: efe:EFER_1648 murein peptide amidase A; murein peptide amidase A 2025001 8116852 Dd1591_1769 Dickeya zeae Ech1591 murein peptide amidase A YP_003004100.1 2024270 R 561229 CDS YP_003004101.1 251789380 8116853 2025209..2026891 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1992 periplasmic murein peptide-binding protein; extracellular solute-binding protein family 5 2026891 8116853 Dd1591_1770 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004101.1 2025209 D 561229 CDS YP_003004102.1 251789381 8116854 2026935..2027099 1 NC_012912.1 hypothetical protein 2027099 8116854 Dd1591_1771 Dickeya zeae Ech1591 hypothetical protein YP_003004102.1 2026935 D 561229 CDS YP_003004103.1 251789382 8116855 2027090..2028073 1 NC_012912.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: eca:ECA1993 zinc transporter; zinc transporter 2028073 zntB 8116855 zntB Dickeya zeae Ech1591 zinc transporter YP_003004103.1 2027090 D 561229 CDS YP_003004104.1 251789383 8116856 complement(2028602..2029543) 1 NC_012912.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2029543 8116856 Dd1591_1773 Dickeya zeae Ech1591 C32 tRNA thiolase YP_003004104.1 2028602 R 561229 CDS YP_003004105.1 251789384 8116857 complement(2029791..2031884) 1 NC_012912.1 KEGG: pst:PSPTO_5206 EF hand domain-containing protein; hypothetical protein 2031884 8116857 Dd1591_1774 Dickeya zeae Ech1591 hypothetical protein YP_003004105.1 2029791 R 561229 CDS YP_003004106.1 251789385 8116858 2032409..2032906 1 NC_012912.1 hypothetical protein 2032906 8116858 Dd1591_1775 Dickeya zeae Ech1591 hypothetical protein YP_003004106.1 2032409 D 561229 CDS YP_003004107.1 251789386 8116859 complement(2033068..2035032) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA2580 putative methyl-accepting chemotaxis citrate transducer; methyl-accepting chemotaxis sensory transducer 2035032 8116859 Dd1591_1776 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004107.1 2033068 R 561229 CDS YP_003004108.1 251789387 8116860 2035335..2035613 1 NC_012912.1 PFAM: protein of unknown function DUF333; KEGG: eca:ECA1999 putative lipoprotein; hypothetical protein 2035613 8116860 Dd1591_1777 Dickeya zeae Ech1591 hypothetical protein YP_003004108.1 2035335 D 561229 CDS YP_003004109.1 251789388 8116861 complement(2035648..2036640) 1 NC_012912.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: eca:ECA2000 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 2036640 8116861 Dd1591_1778 Dickeya zeae Ech1591 D-isomer specific 2-hydroxyacid dehydrogenase YP_003004109.1 2035648 R 561229 CDS YP_003004110.1 251789389 8116862 complement(2036837..2038390) 1 NC_012912.1 KEGG: eca:ECA2002 aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer 2038390 8116862 Dd1591_1779 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004110.1 2036837 R 561229 CDS YP_003004111.1 251789390 8116863 2038698..2041301 1 NC_012912.1 KEGG: eca:ECA2003 hypothetical protein; hypothetical protein 2041301 8116863 Dd1591_1780 Dickeya zeae Ech1591 hypothetical protein YP_003004111.1 2038698 D 561229 CDS YP_003004112.1 251789391 8116864 2041330..2041602 1 NC_012912.1 KEGG: eca:ECA2004 putative lipoprotein; hypothetical protein 2041602 8116864 Dd1591_1781 Dickeya zeae Ech1591 hypothetical protein YP_003004112.1 2041330 D 561229 CDS YP_003004113.1 251789392 8116865 complement(2041664..2042269) 1 NC_012912.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2042269 8116865 Dd1591_1782 Dickeya zeae Ech1591 azoreductase YP_003004113.1 2041664 R 561229 CDS YP_003004114.1 251789393 8116866 2042584..2046471 1 NC_012912.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 2046471 8116866 Dd1591_1783 Dickeya zeae Ech1591 ATP-dependent RNA helicase HrpA YP_003004114.1 2042584 D 561229 CDS YP_003004115.1 251789394 8117268 complement(2046672..2048222) 1 NC_012912.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: eca:ECA1921 L-lactate permease; L-lactate transport 2048222 8117268 Dd1591_1785 Dickeya zeae Ech1591 L-lactate transport YP_003004115.1 2046672 R 561229 CDS YP_003004116.1 251789395 8117269 complement(2048545..2049363) 1 NC_012912.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: eca:ECA2009 putative exported protease; peptidase S1 and S6 chymotrypsin/Hap 2049363 8117269 Dd1591_1786 Dickeya zeae Ech1591 peptidase S1 and S6 chymotrypsin/Hap YP_003004116.1 2048545 R 561229 CDS YP_003004117.1 251789396 8117270 2049460..2049576 1 NC_012912.1 hypothetical protein 2049576 8117270 Dd1591_1787 Dickeya zeae Ech1591 hypothetical protein YP_003004117.1 2049460 D 561229 CDS YP_003004118.1 251789397 8117271 2049669..2050226 1 NC_012912.1 KEGG: hypothetical protein; hypothetical protein 2050226 8117271 Dd1591_1788 Dickeya zeae Ech1591 hypothetical protein YP_003004118.1 2049669 D 561229 CDS YP_003004119.1 251789398 8117272 complement(2050413..2051768) 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA2012 sensor protein RstB; sensor protein RstB 2051768 8117272 Dd1591_1789 Dickeya zeae Ech1591 sensor protein RstB YP_003004119.1 2050413 R 561229 CDS YP_003004120.1 251789399 8117273 complement(2051765..2052511) 1 NC_012912.1 response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 2052511 8117273 Dd1591_1790 Dickeya zeae Ech1591 DNA-binding transcriptional regulator RstA YP_003004120.1 2051765 R 561229 CDS YP_003004121.1 251789400 8117274 2053016..2053450 1 NC_012912.1 KEGG: spe:Spro_2588 hypothetical protein; hypothetical protein 2053450 8117274 Dd1591_1791 Dickeya zeae Ech1591 hypothetical protein YP_003004121.1 2053016 D 561229 CDS YP_003004122.1 251789401 8117275 complement(2053502..2055217) 1 NC_012912.1 TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: eca:ECA2021 putative sulfate transporter YchM; sulfate transporter 2055217 8117275 Dd1591_1792 Dickeya zeae Ech1591 sulfate transporter YP_003004122.1 2053502 R 561229 CDS YP_003004123.1 251789402 8117276 complement(2055491..2056591) 1 NC_012912.1 TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: eca:ECA2022 calcium/sodium:proton antiporter; calcium/sodium:proton antiporter 2056591 8117276 Dd1591_1793 Dickeya zeae Ech1591 calcium/sodium:proton antiporter YP_003004123.1 2055491 R 561229 CDS YP_003004124.1 251789403 8117277 2057163..2057837 1 NC_012912.1 PFAM: ChaC family protein; KEGG: eca:ECA2025 putative cation transport protein; ChaC family protein 2057837 8117277 Dd1591_1794 Dickeya zeae Ech1591 ChaC family protein YP_003004124.1 2057163 D 561229 CDS YP_003004125.1 251789404 8117278 2058023..2059063 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2915 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2059063 8117278 Dd1591_1795 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004125.1 2058023 D 561229 CDS YP_003004126.1 251789405 8117279 2059060..2059920 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2914 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2059920 8117279 Dd1591_1796 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004126.1 2059060 D 561229 CDS YP_003004127.1 251789406 8117280 2059907..2060755 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_2913 ABC transporter-related protein; ABC transporter 2060755 8117280 Dd1591_1797 Dickeya zeae Ech1591 ABC transporter YP_003004127.1 2059907 D 561229 CDS YP_003004128.1 251789407 8117281 2060748..2061431 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_2060 ABC transporter related; ABC transporter 2061431 8117281 Dd1591_1798 Dickeya zeae Ech1591 ABC transporter YP_003004128.1 2060748 D 561229 CDS YP_003004129.1 251789408 8117282 2061520..2063115 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_25780 ABC transporter, periplasmic oligopeptide-binding protein; extracellular solute-binding protein family 5 2063115 8117282 Dd1591_1799 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004129.1 2061520 D 561229 CDS YP_003004130.1 251789409 8117283 2063488..2064195 1 NC_012912.1 PFAM: metallophosphoesterase; KEGG: eum:ECUMN_2132 serine/threonine-specific protein phosphatase 1; metallophosphoesterase 2064195 8117283 Dd1591_1800 Dickeya zeae Ech1591 metallophosphoesterase YP_003004130.1 2063488 D 561229 CDS YP_003004131.1 251789410 8117284 2064251..2064763 1 NC_012912.1 KEGG: kpn:KPN_00487 hypothetical protein; hypothetical protein 2064763 8117284 Dd1591_1801 Dickeya zeae Ech1591 hypothetical protein YP_003004131.1 2064251 D 561229 CDS YP_003004132.1 251789411 8117285 complement(2064850..2066397) 1 NC_012912.1 KEGG: eta:ETA_30660 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; PAS domain containing protein; methyl-accepting chemotaxis sensory transducer 2066397 8117285 Dd1591_1802 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004132.1 2064850 R 561229 CDS YP_003004133.1 251789412 8117286 2066950..2067111 1 NC_012912.1 hypothetical protein 2067111 8117286 Dd1591_1803 Dickeya zeae Ech1591 hypothetical protein YP_003004133.1 2066950 D 561229 CDS YP_003004134.1 251789413 8117287 complement(2067235..2068923) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; KEGG: spe:Spro_2983 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2068923 8117287 Dd1591_1804 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004134.1 2067235 R 561229 CDS YP_003004135.1 251789414 8117288 complement(2069176..2070990) 1 NC_012912.1 KEGG: spe:Spro_2420 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensors-containing diguanylate cyclase 2070990 8117288 Dd1591_1805 Dickeya zeae Ech1591 PAS/PAC and GAF sensors-containing diguanylate cyclase YP_003004135.1 2069176 R 561229 CDS YP_003004136.1 251789415 8117289 2071180..2071296 1 NC_012912.1 hypothetical protein 2071296 8117289 Dd1591_1806 Dickeya zeae Ech1591 hypothetical protein YP_003004136.1 2071180 D 561229 CDS YP_003004137.1 251789416 8117290 complement(2071303..2072643) 1 NC_012912.1 TIGRFAM: guanine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vha:VIBHAR_01787 hypothetical protein; guanine deaminase 2072643 8117290 Dd1591_1807 Dickeya zeae Ech1591 guanine deaminase YP_003004137.1 2071303 R 561229 CDS YP_003004138.1 251789417 8117291 complement(2073029..2073220) 1 NC_012912.1 PFAM: transcriptional activator Ogr/delta; KEGG: ent:Ent638_3475 DNA-binding transcriptional regulator; transcriptional activator Ogr/delta 2073220 8117291 Dd1591_1808 Dickeya zeae Ech1591 transcriptional activator Ogr/delta YP_003004138.1 2073029 R 561229 CDS YP_003004139.1 251789418 8117292 complement(2073316..2074491) 1 NC_012912.1 PFAM: late control D family protein; KEGG: ecg:E2348C_2892 predicted late gene regulator; late control D family protein 2074491 8117292 Dd1591_1809 Dickeya zeae Ech1591 late control D family protein YP_003004139.1 2073316 R 561229 CDS YP_003004140.1 251789419 8117293 complement(2074488..2074985) 1 NC_012912.1 PFAM: P2 GpU family protein; KEGG: yps:YPTB1740 putative phage tail protein; P2 GpU family protein 2074985 8117293 Dd1591_1810 Dickeya zeae Ech1591 P2 GpU family protein YP_003004140.1 2074488 R 561229 CDS YP_003004141.1 251789420 8117294 complement(2074993..2076069) 1 NC_012912.1 KEGG: GG20978 gene product from transcript GG20978-RA; hypothetical protein 2076069 8117294 Dd1591_1811 Dickeya zeae Ech1591 hypothetical protein YP_003004141.1 2074993 R 561229 CDS YP_003004142.1 251789421 8117295 complement(2076062..2076181) 1 NC_012912.1 PFAM: P2 GpE family protein; KEGG: ecm:EcSMS35_4348 phage tail protein, P2 GpE family; P2 GpE family protein 2076181 8117295 Dd1591_1812 Dickeya zeae Ech1591 P2 GpE family protein YP_003004142.1 2076062 R 561229 CDS YP_003004143.1 251789422 8117296 complement(2076214..2076504) 1 NC_012912.1 PFAM: tail E family protein; KEGG: ecz:ECS88_2189 tail protein E (GpE); tail E family protein 2076504 8117296 Dd1591_1813 Dickeya zeae Ech1591 tail E family protein YP_003004143.1 2076214 R 561229 CDS YP_003004144.1 251789423 8117297 complement(2076565..2077083) 1 NC_012912.1 TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: see:SNSL254_A4384 phage major tail tube protein; phage major tail tube protein 2077083 8117297 Dd1591_1814 Dickeya zeae Ech1591 phage major tail tube protein YP_003004144.1 2076565 R 561229 CDS YP_003004145.1 251789424 8117298 complement(2077098..2078267) 1 NC_012912.1 PFAM: tail sheath protein; KEGG: spe:Spro_0863 tail sheath protein; tail sheath protein 2078267 8117298 Dd1591_1815 Dickeya zeae Ech1591 tail sheath protein YP_003004145.1 2077098 R 561229 CDS YP_003004146.1 251789425 8117299 complement(2078485..2079096) 1 NC_012912.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu2035 hypothetical protein; tail assembly chaperone gp38 2079096 8117299 Dd1591_1816 Dickeya zeae Ech1591 tail assembly chaperone gp38 YP_003004146.1 2078485 R 561229 CDS YP_003004147.1 251789426 8117300 complement(2079099..2079689) 1 NC_012912.1 PFAM: Tail Collar domain protein; KEGG: sty:STY1642 alternative bacteriophage tail fiber C-terminus; Tail Collar domain-containing protein 2079689 8117300 Dd1591_1817 Dickeya zeae Ech1591 Tail Collar domain-containing protein YP_003004147.1 2079099 R 561229 CDS YP_003004148.1 251789427 8117301 complement(2079873..2080427) 1 NC_012912.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: kpe:KPK_2840 DNA-invertase hin; Resolvase domain-containing protein 2080427 8117301 Dd1591_1818 Dickeya zeae Ech1591 Resolvase domain-containing protein YP_003004148.1 2079873 R 561229 CDS YP_003004149.1 251789428 8117302 2080452..2080952 1 NC_012912.1 PFAM: Tail Collar domain protein; KEGG: stt:t3433 variable tail fiber protein; Tail Collar domain-containing protein 2080952 8117302 Dd1591_1819 Dickeya zeae Ech1591 Tail Collar domain-containing protein YP_003004149.1 2080452 D 561229 CDS YP_003004150.1 251789429 8117303 2081103..2081669 1 NC_012912.1 PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: esa:ESA_01951 hypothetical protein; Smr protein/MutS2 2081669 8117303 Dd1591_1820 Dickeya zeae Ech1591 Smr protein/MutS2 YP_003004150.1 2081103 D 561229 CDS YP_003004151.1 251789430 8117304 complement(2081732..2083078) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: spe:Spro_2512 major facilitator transporter; major facilitator superfamily protein 2083078 8117304 Dd1591_1821 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003004151.1 2081732 R 561229 CDS YP_003004152.1 251789431 8117305 complement(2083235..2084590) 1 NC_012912.1 KEGG: spe:Spro_1010 hypothetical protein; hypothetical protein 2084590 8117305 Dd1591_1822 Dickeya zeae Ech1591 hypothetical protein YP_003004152.1 2083235 R 561229 CDS YP_003004153.1 251789432 8117306 complement(2084754..2085959) 1 NC_012912.1 PFAM: Tail Collar domain protein; KEGG: eta:ETA_05860 putative phage tail fiber protein; Tail Collar domain-containing protein 2085959 8117306 Dd1591_1823 Dickeya zeae Ech1591 Tail Collar domain-containing protein YP_003004153.1 2084754 R 561229 CDS YP_003004154.1 251789433 8117307 complement(2086194..2086805) 1 NC_012912.1 TIGRFAM: phage tail protein I; KEGG: yps:YPTB1748 putative bacteriophage protein; phage tail protein I 2086805 8117307 Dd1591_1824 Dickeya zeae Ech1591 phage tail protein I YP_003004154.1 2086194 R 561229 CDS YP_003004155.1 251789434 8117308 complement(2086798..2087706) 1 NC_012912.1 PFAM: Baseplate J family protein; KEGG: ecf:ECH74115_3037 baseplate assembly protein GpJ; baseplate J family protein 2087706 8117308 Dd1591_1825 Dickeya zeae Ech1591 baseplate J family protein YP_003004155.1 2086798 R 561229 CDS YP_003004156.1 251789435 8117309 complement(2087711..2088061) 1 NC_012912.1 PFAM: GPW/gp25 family protein; KEGG: kpn:KPN_04869 putative prophage baseplate protein; GPW/gp25 family protein 2088061 8117309 Dd1591_1826 Dickeya zeae Ech1591 GPW/gp25 family protein YP_003004156.1 2087711 R 561229 CDS YP_003004157.1 251789436 8117310 complement(2088058..2088711) 1 NC_012912.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: ecm:EcSMS35_4337 phage baseplate assembly protein GpV; phage baseplate assembly protein V 2088711 8117310 Dd1591_1827 Dickeya zeae Ech1591 phage baseplate assembly protein V YP_003004157.1 2088058 R 561229 CDS YP_003004158.1 251789437 8117311 complement(2089121..2089582) 1 NC_012912.1 PFAM: P2 phage tail completion R family protein; KEGG: kpn:KPN_04873 putative prophage, tail completion protein; P2 phage tail completion R family protein 2089582 8117311 Dd1591_1828 Dickeya zeae Ech1591 P2 phage tail completion R family protein YP_003004158.1 2089121 R 561229 CDS YP_003004159.1 251789438 8117312 complement(2089624..2089827) 1 NC_012912.1 PFAM: tail X family protein; KEGG: eta:ETA_05750 putative phage tail protein; tail X family protein 2089827 8117312 Dd1591_1829 Dickeya zeae Ech1591 tail X family protein YP_003004159.1 2089624 R 561229 CDS YP_003004160.1 251789439 8117313 complement(2090276..2090407) 1 NC_012912.1 hypothetical protein 2090407 8117313 Dd1591_1830 Dickeya zeae Ech1591 hypothetical protein YP_003004160.1 2090276 R 561229 CDS YP_003004161.1 251789440 8117314 complement(2090417..2090536) 1 NC_012912.1 hypothetical protein 2090536 8117314 Dd1591_1831 Dickeya zeae Ech1591 hypothetical protein YP_003004161.1 2090417 R 561229 CDS YP_003004162.1 251789441 8117315 complement(2090702..2092897) 1 NC_012912.1 PFAM: replication gene A; KEGG: spe:Spro_0874 replication gene A; replication gene A protein 2092897 8117315 Dd1591_1832 Dickeya zeae Ech1591 replication gene A protein YP_003004162.1 2090702 R 561229 CDS YP_003004163.1 251789442 8117316 complement(2092945..2093169) 1 NC_012912.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: yen:YE1687 hypothetical protein; TraR/DksA family transcriptional regulator 2093169 8117316 Dd1591_1833 Dickeya zeae Ech1591 TraR/DksA family transcriptional regulator YP_003004163.1 2092945 R 561229 CDS YP_003004164.1 251789443 8117317 complement(2093169..2093378) 1 NC_012912.1 hypothetical protein 2093378 8117317 Dd1591_1834 Dickeya zeae Ech1591 hypothetical protein YP_003004164.1 2093169 R 561229 CDS YP_003004165.1 251789444 8117318 complement(2093530..2094042) 1 NC_012912.1 KEGG: ecz:ECS88_2224 replication gene B protein (GpB); replication gene B protein (GpB) 2094042 8117318 Dd1591_1835 Dickeya zeae Ech1591 replication gene B protein (GpB) YP_003004165.1 2093530 R 561229 CDS YP_003004166.1 251789445 8117319 complement(2094045..2094509) 1 NC_012912.1 hypothetical protein 2094509 8117319 Dd1591_1836 Dickeya zeae Ech1591 hypothetical protein YP_003004166.1 2094045 R 561229 CDS YP_003004167.1 251789446 8117320 2094664..2095476 1 NC_012912.1 PFAM: CI repressor; KEGG: spe:Spro_0877 CI repressor; CI repressor 2095476 8117320 Dd1591_1837 Dickeya zeae Ech1591 CI repressor YP_003004167.1 2094664 D 561229 CDS YP_003004168.1 251789447 8117321 2096205..2098208 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ypg:YpAngola_A3774 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2098208 8117321 Dd1591_1838 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004168.1 2096205 D 561229 CDS YP_003004169.1 251789448 8117322 complement(2098422..2098613) 1 NC_012912.1 PFAM: protein of unknown function DUF1482; KEGG: kpn:KPN_02353 hypothetical protein; hypothetical protein 2098613 8117322 Dd1591_1839 Dickeya zeae Ech1591 hypothetical protein YP_003004169.1 2098422 R 561229 CDS YP_003004170.1 251789449 8117323 complement(2098706..2100154) 1 NC_012912.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2100154 yebU 8117323 yebU Dickeya zeae Ech1591 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_003004170.1 2098706 R 561229 CDS YP_003004171.1 251789450 8117324 complement(2100276..2102906) 1 NC_012912.1 PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA2463 hypothetical protein; mammalian cell entry related domain-containing protein 2102906 8117324 Dd1591_1841 Dickeya zeae Ech1591 mammalian cell entry related domain-containing protein YP_003004171.1 2100276 R 561229 CDS YP_003004172.1 251789451 8117325 complement(2102950..2104314) 1 NC_012912.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: eca:ECA2462 hypothetical protein; integral membrane protein, PqiA family 2104314 8117325 Dd1591_1842 Dickeya zeae Ech1591 integral membrane protein, PqiA family YP_003004172.1 2102950 R 561229 CDS YP_003004173.1 251789452 8117326 2104486..2104992 1 NC_012912.1 PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: eca:ECA2461 hypothetical protein; putative GAF sensor protein 2104992 8117326 Dd1591_1843 Dickeya zeae Ech1591 putative GAF sensor protein YP_003004173.1 2104486 D 561229 CDS YP_003004174.1 251789453 8117327 2105077..2105808 1 NC_012912.1 affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 2105808 8117327 Dd1591_1844 Dickeya zeae Ech1591 putative solute/DNA competence effector YP_003004174.1 2105077 D 561229 CDS YP_003004175.1 251789454 8117328 2105828..2107849 1 NC_012912.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2107849 8117328 Dd1591_1845 Dickeya zeae Ech1591 carboxy-terminal protease YP_003004175.1 2105828 D 561229 CDS YP_003004176.1 251789455 8117329 complement(2108013..2109068) 1 NC_012912.1 PFAM: protein of unknown function DUF481; KEGG: eca:ECA2026 hypothetical protein; hypothetical protein 2109068 8117329 Dd1591_1846 Dickeya zeae Ech1591 hypothetical protein YP_003004176.1 2108013 R 561229 CDS YP_003004177.1 251789456 8117330 complement(2109299..2110567) 1 NC_012912.1 PFAM: acyltransferase 3; KEGG: eca:ECA2027 putative acyltransferase; acyltransferase 3 2110567 8117330 Dd1591_1847 Dickeya zeae Ech1591 acyltransferase 3 YP_003004177.1 2109299 R 561229 CDS YP_003004178.1 251789457 8117331 complement(2110829..2111476) 1 NC_012912.1 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL 2111476 8117331 Dd1591_1848 Dickeya zeae Ech1591 transcriptional regulator NarL YP_003004178.1 2110829 R 561229 CDS YP_003004179.1 251789458 8117332 complement(2111469..2113280) 1 NC_012912.1 KEGG: eca:ECA2029 nitrate/nitrite sensor protein NarX; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; nitrate/nitrite sensor protein NarX 2113280 8117332 Dd1591_1849 Dickeya zeae Ech1591 nitrate/nitrite sensor protein NarX YP_003004179.1 2111469 R 561229 CDS YP_003004180.1 251789459 8117333 2113742..2115133 1 NC_012912.1 TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2030 nitrite extrusion protein; nitrite transporter 2115133 8117333 Dd1591_1850 Dickeya zeae Ech1591 nitrite transporter YP_003004180.1 2113742 D 561229 CDS YP_003004181.1 251789460 8117334 complement(2115236..2116243) 1 NC_012912.1 PFAM: beta-lactamase domain protein; KEGG: eca:ECA2849 metallo-beta-lactamase; beta-lactamase domain-containing protein 2116243 8117334 Dd1591_1851 Dickeya zeae Ech1591 beta-lactamase domain-containing protein YP_003004181.1 2115236 R 561229 CDS YP_003004182.1 251789461 8117335 2116360..2117250 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2848 LysR family transcriptional regulator; LysR family transcriptional regulator 2117250 8117335 Dd1591_1852 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004182.1 2116360 D 561229 CDS YP_003004183.1 251789462 8117336 2117585..2121358 1 NC_012912.1 TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: eca:ECA2031 respiratory nitrate reductase 1 alpha chain; nitrate reductase subunit alpha 2121358 8117336 Dd1591_1853 Dickeya zeae Ech1591 nitrate reductase subunit alpha YP_003004183.1 2117585 D 561229 CDS YP_003004184.1 251789463 8117337 2121355..2122917 1 NC_012912.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: eca:ECA2032 respiratory nitrate reductase 1 beta chain; nitrate reductase subunit beta 2122917 8117337 Dd1591_1854 Dickeya zeae Ech1591 nitrate reductase subunit beta YP_003004184.1 2121355 D 561229 CDS YP_003004185.1 251789464 8117338 2122914..2123633 1 NC_012912.1 KEGG: eca:ECA2033 respiratory nitrate reductase 1 delta chain; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; nitrate reductase molybdenum cofactor assembly chaperone 2123633 8117338 Dd1591_1855 Dickeya zeae Ech1591 nitrate reductase molybdenum cofactor assembly chaperone YP_003004185.1 2122914 D 561229 CDS YP_003004186.1 251789465 8117339 2123633..2124310 1 NC_012912.1 KEGG: kpe:KPK_2098 respiratory nitrate reductase 1, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma 2124310 8117339 Dd1591_1856 Dickeya zeae Ech1591 respiratory nitrate reductase subunit gamma YP_003004186.1 2123633 D 561229 CDS YP_003004187.1 251789466 8117340 2124684..2125832 1 NC_012912.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ilo:IL0796 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2125832 8117340 Dd1591_1857 Dickeya zeae Ech1591 iron-containing alcohol dehydrogenase YP_003004187.1 2124684 D 561229 CDS YP_003004188.1 251789467 8117341 2125975..2126196 1 NC_012912.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: ses:SARI_01418 hypothetical protein; prevent-host-death family protein 2126196 8117341 Dd1591_1858 Dickeya zeae Ech1591 prevent-host-death family protein YP_003004188.1 2125975 D 561229 CDS YP_003004189.1 251789468 8117342 2126193..2126570 1 NC_012912.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: ses:SARI_01417 hypothetical protein; death-on-curing family protein 2126570 8117342 Dd1591_1859 Dickeya zeae Ech1591 death-on-curing family protein YP_003004189.1 2126193 D 561229 CDS YP_003004190.1 251789469 8117344 2126974..2127621 1 NC_012912.1 KEGG: vpa:VP1851 hypothetical protein; hypothetical protein 2127621 8117344 Dd1591_1861 Dickeya zeae Ech1591 hypothetical protein YP_003004190.1 2126974 D 561229 CDS YP_003004191.1 251789470 8117345 complement(2127731..2128762) 1 NC_012912.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 2128762 8117345 Dd1591_1862 Dickeya zeae Ech1591 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_003004191.1 2127731 R 561229 CDS YP_003004192.1 251789471 8117346 complement(2128790..2129767) 1 NC_012912.1 PFAM: Domain of unknown function DUF1852; KEGG: spe:Spro_3175 hypothetical protein; hypothetical protein 2129767 8117346 Dd1591_1863 Dickeya zeae Ech1591 hypothetical protein YP_003004192.1 2128790 R 561229 CDS YP_003004193.1 251789472 8119341 complement(2130225..2130455) 1 NC_012912.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: esa:ESA_01873 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2130455 8119341 Dd1591_1864 Dickeya zeae Ech1591 4-oxalocrotonate tautomerase YP_003004193.1 2130225 R 561229 CDS YP_003004194.1 251789473 8119342 complement(2130632..2131726) 1 NC_012912.1 KEGG: eca:ECA2051 putitive ABC-transporter ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2131726 8119342 Dd1591_1865 Dickeya zeae Ech1591 spermidine/putrescine ABC transporter ATPase YP_003004194.1 2130632 R 561229 CDS YP_003004195.1 251789474 8119343 complement(2132106..2133593) 1 NC_012912.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: eca:ECA2052 GntR family transcriptional regulator; GntR family transcriptional regulator 2133593 8119343 Dd1591_1866 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003004195.1 2132106 R 561229 CDS YP_003004196.1 251789475 8119344 2133719..2134984 1 NC_012912.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2134984 8119344 Dd1591_1867 Dickeya zeae Ech1591 4-aminobutyrate aminotransferase YP_003004196.1 2133719 D 561229 CDS YP_003004197.1 251789476 8119345 2135006..2136466 1 NC_012912.1 KEGG: eca:ECA2054 succinate-semialdehyde dehydrogenase [NADP+]; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinic semialdehyde dehydrogenase 2136466 8119345 Dd1591_1868 Dickeya zeae Ech1591 succinic semialdehyde dehydrogenase YP_003004197.1 2135006 D 561229 CDS YP_003004198.1 251789477 8119346 2136784..2137815 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2055 putative transport system, periplasmic solute-binding protein; extracellular solute-binding protein family 1 2137815 8119346 Dd1591_1869 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003004198.1 2136784 D 561229 CDS YP_003004199.1 251789478 8119347 2137852..2139123 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2056 putative transport system, permease protein; binding-protein-dependent transport systems inner membrane component 2139123 8119347 Dd1591_1870 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004199.1 2137852 D 561229 CDS YP_003004200.1 251789479 8119348 2139139..2139975 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2057 putative transport system, permease protein; binding-protein-dependent transport systems inner membrane component 2139975 8119348 Dd1591_1871 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004200.1 2139139 D 561229 CDS YP_003004201.1 251789480 8119349 complement(2140058..2140951) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3091 LysR family transcriptional regulator; LysR family transcriptional regulator 2140951 8119349 Dd1591_1872 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004201.1 2140058 R 561229 CDS YP_003004202.1 251789481 8119350 2141050..2141652 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3092 glutathione S-transferase domain-containing protein; Glutathione S-transferase domain-containing protein 2141652 8119350 Dd1591_1873 Dickeya zeae Ech1591 Glutathione S-transferase domain-containing protein YP_003004202.1 2141050 D 561229 CDS YP_003004203.1 251789482 8119351 2141652..2142506 1 NC_012912.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spe:Spro_3093 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-related FMN-binding 2142506 8119351 Dd1591_1874 Dickeya zeae Ech1591 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_003004203.1 2141652 D 561229 CDS YP_003004204.1 251789483 8119352 complement(2142551..2143330) 1 NC_012912.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eca:ECA1907 DeoR family transcriptional regulator; DeoR family transcriptional regulator 2143330 8119352 Dd1591_1875 Dickeya zeae Ech1591 DeoR family transcriptional regulator YP_003004204.1 2142551 R 561229 CDS YP_003004205.1 251789484 8119353 2143445..2144236 1 NC_012912.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: eca:ECA2167 putative inositol monophosphatase; histidinol-phosphate phosphatase 2144236 8119353 Dd1591_1876 Dickeya zeae Ech1591 histidinol-phosphate phosphatase YP_003004205.1 2143445 D 561229 CDS YP_003004206.1 251789485 8119354 2144325..2145503 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl01_3782 major facilitator transporter; major facilitator superfamily protein 2145503 8119354 Dd1591_1877 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003004206.1 2144325 D 561229 CDS YP_003004207.1 251789486 8119355 2145516..2146328 1 NC_012912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: eca:ECA1906 putative hydrolase; HAD-superfamily hydrolase 2146328 8119355 Dd1591_1878 Dickeya zeae Ech1591 HAD-superfamily hydrolase YP_003004207.1 2145516 D 561229 CDS YP_003004208.1 251789487 8119356 complement(2146796..2148781) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: ypg:YpAngola_A3774 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2148781 8119356 Dd1591_1879 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004208.1 2146796 R 561229 CDS YP_003004209.1 251789488 8119357 complement(2149356..2150585) 1 NC_012912.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transport protein 2150585 8119357 Dd1591_1880 Dickeya zeae Ech1591 transport protein YP_003004209.1 2149356 R 561229 CDS YP_003004210.1 251789489 8119358 2150777..2150929 1 NC_012912.1 hypothetical protein 2150929 8119358 Dd1591_1881 Dickeya zeae Ech1591 hypothetical protein YP_003004210.1 2150777 D 561229 CDS YP_003004211.1 251789490 8119359 complement(2151273..2152358) 1 NC_012912.1 TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter; KEGG: eca:ECA2076 type III secretion protein; YscU/HrpY family type III secretion protein 2152358 8119359 Dd1591_1882 Dickeya zeae Ech1591 YscU/HrpY family type III secretion protein YP_003004211.1 2151273 R 561229 CDS YP_003004212.1 251789491 8119360 complement(2152403..2153206) 1 NC_012912.1 TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: eca:ECA2077 type III secretion protein; type III secretion protein SpaR/YscT/HrcT 2153206 8119360 Dd1591_1883 Dickeya zeae Ech1591 type III secretion protein SpaR/YscT/HrcT YP_003004212.1 2152403 R 561229 CDS YP_003004213.1 251789492 8119361 complement(2153214..2153474) 1 NC_012912.1 TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: eta:ETA_05140 HrcS protein (hrp cluster); HrpO family type III secretion protein 2153474 8119361 Dd1591_1884 Dickeya zeae Ech1591 HrpO family type III secretion protein YP_003004213.1 2153214 R 561229 CDS YP_003004214.1 251789493 8119362 complement(2153482..2154135) 1 NC_012912.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 2154135 8119362 Dd1591_1885 Dickeya zeae Ech1591 type III secretion system protein YP_003004214.1 2153482 R 561229 CDS YP_003004215.1 251789494 8119363 complement(2154132..2155295) 1 NC_012912.1 TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: eca:ECA2080 type III secretion protein; type III secretion system apparatus protein YscQ/HrcQ 2155295 8119363 Dd1591_1886 Dickeya zeae Ech1591 type III secretion system apparatus protein YscQ/HrcQ YP_003004215.1 2154132 R 561229 CDS YP_003004216.1 251789495 8119364 complement(2155292..2155822) 1 NC_012912.1 KEGG: eca:ECA2081 type III secretion protein; hypothetical protein 2155822 8119364 Dd1591_1887 Dickeya zeae Ech1591 hypothetical protein YP_003004216.1 2155292 R 561229 CDS YP_003004217.1 251789496 8119365 complement(2155819..2156298) 1 NC_012912.1 KEGG: eca:ECA2082 type III secretion protein; type III secretion protein 2156298 8119365 Dd1591_1888 Dickeya zeae Ech1591 type III secretion protein YP_003004217.1 2155819 R 561229 CDS YP_003004218.1 251789497 8119366 complement(2156285..2157664) 1 NC_012912.1 KEGG: eca:ECA2083 type III secretion protein; TIGRFAM: type III secretion apparatus H+-transporting two-sector ATPase; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; type III secretion apparatus H+-transporting two-sector ATPase 2157664 8119366 Dd1591_1889 Dickeya zeae Ech1591 type III secretion apparatus H+-transporting two-sector ATPase YP_003004218.1 2156285 R 561229 CDS YP_003004219.1 251789498 8119367 complement(2157664..2158635) 1 NC_012912.1 TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family; PFAM: Forkhead-associated protein; KEGG: eca:ECA2084 type III secretion protein; YscD/HrpQ family type III secretion apparatus protein 2158635 8119367 Dd1591_1890 Dickeya zeae Ech1591 YscD/HrpQ family type III secretion apparatus protein YP_003004219.1 2157664 R 561229 CDS YP_003004220.1 251789499 8119368 complement(2158646..2160748) 1 NC_012912.1 TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: eca:ECA2085 type III secretion protein; HrcV family type III secretion protein 2160748 8119368 Dd1591_1891 Dickeya zeae Ech1591 HrcV family type III secretion protein YP_003004220.1 2158646 R 561229 CDS YP_003004221.1 251789500 8119369 complement(2160752..2161933) 1 NC_012912.1 TIGRFAM: type III secretion regulator YopN/LcrE/InvE/MxiC; type III secretion effector delivery regulator, TyeA family; PFAM: Hypersensitivity response secretion HrpJ domain protein; KEGG: eca:ECA2086 type III secretion protein; type III secretion regulator YopN/LcrE/InvE/MxiC 2161933 8119369 Dd1591_1892 Dickeya zeae Ech1591 type III secretion regulator YopN/LcrE/InvE/MxiC YP_003004221.1 2160752 R 561229 CDS YP_003004222.1 251789501 8119370 2162256..2162810 1 NC_012912.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: eca:ECA2087 sigma factor; RNA polymerase, sigma-24 subunit, ECF subfamily 2162810 8119370 Dd1591_1893 Dickeya zeae Ech1591 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003004222.1 2162256 D 561229 CDS YP_003004223.1 251789502 8119371 2162896..2164536 1 NC_012912.1 KEGG: eca:ECA2088 two-component sensor kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2164536 8119371 Dd1591_1894 Dickeya zeae Ech1591 PAS/PAC sensor signal transduction histidine kinase YP_003004223.1 2162896 D 561229 CDS YP_003004224.1 251789503 8119372 2164569..2165210 1 NC_012912.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: eca:ECA2089 two-component response regulator; LuxR family two component transcriptional regulator 2165210 8119372 Dd1591_1895 Dickeya zeae Ech1591 LuxR family two component transcriptional regulator YP_003004224.1 2164569 D 561229 CDS YP_003004225.1 251789504 8119373 2165584..2166561 1 NC_012912.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: eca:ECA2090 sigma-54-dependent enhancer-binding protein; sigma54 specific transcriptional regulator, Fis family 2166561 8119373 Dd1591_1896 Dickeya zeae Ech1591 sigma54 specific transcriptional regulator, Fis family YP_003004225.1 2165584 D 561229 CDS YP_003004226.1 251789505 8119374 2166731..2166934 1 NC_012912.1 KEGG: eca:ECA2093 type III secretion protein; type III secretion protein 2166934 8119374 Dd1591_1897 Dickeya zeae Ech1591 type III secretion protein YP_003004226.1 2166731 D 561229 CDS YP_003004227.1 251789506 8119375 2167017..2167385 1 NC_012912.1 TIGRFAM: type III secretion apparatus protein, YscI/HrpB family; KEGG: eca:ECA2094 type III secretion protein; YscI/HrpB family type III secretion apparatus protein 2167385 8119375 Dd1591_1898 Dickeya zeae Ech1591 YscI/HrpB family type III secretion apparatus protein YP_003004227.1 2167017 D 561229 CDS YP_003004228.1 251789507 8119376 2167465..2168250 1 NC_012912.1 TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: eca:ECA2095 type III secretion protein; type III secretion apparatus lipoprotein, YscJ/HrcJ family 2168250 8119376 Dd1591_1899 Dickeya zeae Ech1591 type III secretion apparatus lipoprotein, YscJ/HrcJ family YP_003004228.1 2167465 D 561229 CDS YP_003004229.1 251789508 8119377 2168253..2168816 1 NC_012912.1 KEGG: eca:ECA2096 type III secretion protein; type III secretion protein 2168816 8119377 Dd1591_1900 Dickeya zeae Ech1591 type III secretion protein YP_003004229.1 2168253 D 561229 CDS YP_003004230.1 251789509 8119378 2168922..2169524 1 NC_012912.1 TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; PFAM: HrpE family protein; KEGG: eca:ECA2097 type III secretion protein; HrpE/YscL family type III secretion apparatus protein 2169524 8119378 Dd1591_1901 Dickeya zeae Ech1591 HrpE/YscL family type III secretion apparatus protein YP_003004230.1 2168922 D 561229 CDS YP_003004231.1 251789510 8119379 2169768..2171075 1 NC_012912.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pap:PSPA7_1115 putative lipoprotein; lytic murein transglycosylase 2171075 8119379 Dd1591_1902 Dickeya zeae Ech1591 lytic murein transglycosylase YP_003004231.1 2169768 D 561229 CDS YP_003004232.1 251789511 8119380 complement(2171085..2172245) 1 NC_012912.1 KEGG: hch:HCH_03110 alpha/beta fold family hydrolase; hypothetical protein 2172245 8119380 Dd1591_1903 Dickeya zeae Ech1591 hypothetical protein YP_003004232.1 2171085 R 561229 CDS YP_003004233.1 251789512 8119381 2172688..2173737 1 NC_012912.1 hypothetical protein 2173737 8119381 Dd1591_1904 Dickeya zeae Ech1591 hypothetical protein YP_003004233.1 2172688 D 561229 CDS YP_003004234.1 251789513 8119382 2173969..2174196 1 NC_012912.1 PFAM: HrpF family protein; KEGG: eca:ECA2098 type III secretion protein; HrpF family protein 2174196 8119382 Dd1591_1905 Dickeya zeae Ech1591 HrpF family protein YP_003004234.1 2173969 D 561229 CDS YP_003004235.1 251789514 8119383 2174183..2174617 1 NC_012912.1 KEGG: eca:ECA2099 type III secretion protein; type III secretion protein 2174617 8119383 Dd1591_1906 Dickeya zeae Ech1591 type III secretion protein YP_003004235.1 2174183 D 561229 CDS YP_003004236.1 251789515 8119384 2174610..2176685 1 NC_012912.1 TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: eca:ECA2100 type III secretion protein; type III secretion outer membrane pore, YscC/HrcC family 2176685 8119384 Dd1591_1907 Dickeya zeae Ech1591 type III secretion outer membrane pore, YscC/HrcC family YP_003004236.1 2174610 D 561229 CDS YP_003004237.1 251789516 8119385 2176720..2176905 1 NC_012912.1 KEGG: eca:ECA2101 type III secretion lipoprotein; type III secretion lipoprotein 2176905 8119385 Dd1591_1908 Dickeya zeae Ech1591 type III secretion lipoprotein YP_003004237.1 2176720 D 561229 CDS YP_003004238.1 251789517 8119386 2176902..2177312 1 NC_012912.1 KEGG: eta:ETA_05360 HrpV protein (hrp cluster); hypothetical protein 2177312 8119386 Dd1591_1909 Dickeya zeae Ech1591 hypothetical protein YP_003004238.1 2176902 D 561229 CDS YP_003004239.1 251789518 8119387 2177472..2178488 1 NC_012912.1 PFAM: Harpin family protein; KEGG: eca:ECA2103 harpin; Harpin family protein 2178488 8119387 Dd1591_1910 Dickeya zeae Ech1591 Harpin family protein YP_003004239.1 2177472 D 561229 CDS YP_003004240.1 251789519 8119388 complement(2178575..2178970) 1 NC_012912.1 PFAM: Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: hch:HCH_03272 mannose-6-phosphate isomerase; Cupin 2 barrel domain-containing protein 2178970 8119388 Dd1591_1911 Dickeya zeae Ech1591 Cupin 2 barrel domain-containing protein YP_003004240.1 2178575 R 561229 CDS YP_003004241.1 251789520 8119389 2179295..2180971 1 NC_012912.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: eca:ECA2116 putative hemolysin activator protein; Polypeptide-transport-associated domain-containing protein ShlB-type 2180971 8119389 Dd1591_1912 Dickeya zeae Ech1591 Polypeptide-transport-associated domain-containing protein ShlB-type YP_003004241.1 2179295 D 561229 CDS YP_003004242.1 251789521 8119390 2181079..2192451 1 NC_012912.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin putative; KEGG: ent:Ent638_0053 filamentous haemagglutinin outer membrane protein; filamentous hemagglutinin family outer membrane protein 2192451 8119390 Dd1591_1913 Dickeya zeae Ech1591 filamentous hemagglutinin family outer membrane protein YP_003004242.1 2181079 D 561229 CDS YP_003004243.1 251789522 8119391 2192441..2193055 1 NC_012912.1 hypothetical protein 2193055 8119391 Dd1591_1914 Dickeya zeae Ech1591 hypothetical protein YP_003004243.1 2192441 D 561229 CDS YP_003004244.1 251789523 8119392 complement(2193384..2193671) 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3380 hypothetical protein; hypothetical protein 2193671 8119392 Dd1591_1915 Dickeya zeae Ech1591 hypothetical protein YP_003004244.1 2193384 R 561229 CDS YP_003004245.1 251789524 8119393 complement(2193746..2194132) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA3417 putative phage regulatory protein; XRE family transcriptional regulator 2194132 8119393 Dd1591_1916 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003004245.1 2193746 R 561229 CDS YP_003004246.1 251789525 8119394 2194248..2197502 1 NC_012912.1 PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; KEGG: plu:plu3714 hypothetical protein; zinc finger CHC2-family protein 2197502 8119394 Dd1591_1917 Dickeya zeae Ech1591 zinc finger CHC2-family protein YP_003004246.1 2194248 D 561229 CDS YP_003004247.1 251789526 8119395 2197495..2198604 1 NC_012912.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2198604 xerC 8119395 xerC Dickeya zeae Ech1591 site-specific tyrosine recombinase XerC YP_003004247.1 2197495 D 561229 CDS YP_003004248.1 251789527 8119396 2199507..2200337 1 NC_012912.1 KEGG: ypi:YpsIP31758_0519 hypothetical protein; hypothetical protein 2200337 8119396 Dd1591_1919 Dickeya zeae Ech1591 hypothetical protein YP_003004248.1 2199507 D 561229 CDS YP_003004249.1 251789528 8119397 2200343..2200723 1 NC_012912.1 KEGG: pap:PSPA7_0046 hypothetical protein; hypothetical protein 2200723 8119397 Dd1591_1920 Dickeya zeae Ech1591 hypothetical protein YP_003004249.1 2200343 D 561229 CDS YP_003004250.1 251789529 8119398 complement(2200968..2201255) 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3380 hypothetical protein; hypothetical protein 2201255 8119398 Dd1591_1921 Dickeya zeae Ech1591 hypothetical protein YP_003004250.1 2200968 R 561229 CDS YP_003004251.1 251789530 8119399 complement(2201330..2201716) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA3417 putative phage regulatory protein; XRE family transcriptional regulator 2201716 8119399 Dd1591_1922 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003004251.1 2201330 R 561229 CDS YP_003004252.1 251789531 8119400 2201832..2205188 1 NC_012912.1 PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; KEGG: plu:plu3714 hypothetical protein; zinc finger CHC2-family protein 2205188 8119400 Dd1591_1923 Dickeya zeae Ech1591 zinc finger CHC2-family protein YP_003004252.1 2201832 D 561229 CDS YP_003004253.1 251789532 8119401 2205181..2206290 1 NC_012912.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2206290 xerC 8119401 xerC Dickeya zeae Ech1591 site-specific tyrosine recombinase XerC YP_003004253.1 2205181 D 561229 CDS YP_003004254.1 251789533 8119402 2207193..2208227 1 NC_012912.1 KEGG: eta:ETA_19590 hypothetical protein; hypothetical protein 2208227 8119402 Dd1591_1925 Dickeya zeae Ech1591 hypothetical protein YP_003004254.1 2207193 D 561229 CDS YP_003004255.1 251789534 8119403 2208239..2208604 1 NC_012912.1 KEGG: plu:plu0222 hypothetical protein; hypothetical protein 2208604 8119403 Dd1591_1926 Dickeya zeae Ech1591 hypothetical protein YP_003004255.1 2208239 D 561229 CDS YP_003004256.1 251789535 8119404 complement(2208847..2209059) 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3380 hypothetical protein; hypothetical protein 2209059 8119404 Dd1591_1927 Dickeya zeae Ech1591 hypothetical protein YP_003004256.1 2208847 R 561229 CDS YP_003004257.1 251789536 8119406 2209536..2209799 1 NC_012912.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: ecm:EcSMS35_3216 putative addiction module antidote protein, CC2985 family; putative CopG/Arc/MetJ family addiction module antidote protein 2209799 8119406 Dd1591_1929 Dickeya zeae Ech1591 putative CopG/Arc/MetJ family addiction module antidote protein YP_003004257.1 2209536 D 561229 CDS YP_003004258.1 251789537 8119407 2209796..2210107 1 NC_012912.1 PFAM: plasmid stabilization system; KEGG: rso:RSc3224 hypothetical protein; plasmid stabilization system protein 2210107 8119407 Dd1591_1930 Dickeya zeae Ech1591 plasmid stabilization system protein YP_003004258.1 2209796 D 561229 CDS YP_003004259.1 251789538 8119408 2210552..2210791 1 NC_012912.1 PFAM: FeoA family protein; KEGG: rru:Rru_A2468 hypothetical protein; FeoA family protein 2210791 8119408 Dd1591_1931 Dickeya zeae Ech1591 FeoA family protein YP_003004259.1 2210552 D 561229 CDS YP_003004260.1 251789539 8119409 2210901..2211128 1 NC_012912.1 PFAM: FeoA family protein; KEGG: rru:Rru_A2469 hypothetical protein; FeoA family protein 2211128 8119409 Dd1591_1932 Dickeya zeae Ech1591 FeoA family protein YP_003004260.1 2210901 D 561229 CDS YP_003004261.1 251789540 8119410 2211151..2213475 1 NC_012912.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: rru:Rru_A2470 ferrous iron transport protein B; ferrous iron transport protein B 2213475 8119410 Dd1591_1933 Dickeya zeae Ech1591 ferrous iron transport protein B YP_003004261.1 2211151 D 561229 CDS YP_003004262.1 251789541 8119411 2213513..2213734 1 NC_012912.1 PFAM: Protein of unknown function DUF1920; KEGG: rru:Rru_A2471 hypothetical protein; hypothetical protein 2213734 8119411 Dd1591_1934 Dickeya zeae Ech1591 hypothetical protein YP_003004262.1 2213513 D 561229 CDS YP_003004263.1 251789542 8119412 complement(2213841..2213951) 1 NC_012912.1 hypothetical protein 2213951 8119412 Dd1591_1935 Dickeya zeae Ech1591 hypothetical protein YP_003004263.1 2213841 R 561229 CDS YP_003004264.1 251789543 8119413 2213997..2215268 1 NC_012912.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2215268 8119413 Dd1591_1936 Dickeya zeae Ech1591 peptidase T YP_003004264.1 2213997 D 561229 CDS YP_003004265.1 251789544 8119414 complement(2215405..2216526) 1 NC_012912.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: eca:ECA2447 hypothetical protein; Cupin 4 family protein 2216526 8119414 Dd1591_1937 Dickeya zeae Ech1591 Cupin 4 family protein YP_003004265.1 2215405 R 561229 CDS YP_003004266.1 251789545 8119415 complement(2216749..2218200) 1 NC_012912.1 PFAM: PhoQ Sensor domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: eca:ECA2446 sensor protein PhoQ; sensor protein PhoQ 2218200 8119415 Dd1591_1938 Dickeya zeae Ech1591 sensor protein PhoQ YP_003004266.1 2216749 R 561229 CDS YP_003004267.1 251789546 8119416 complement(2218256..2218924) 1 NC_012912.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 2218924 8119416 Dd1591_1939 Dickeya zeae Ech1591 DNA-binding transcriptional regulator PhoP YP_003004267.1 2218256 R 561229 CDS YP_003004268.1 251789547 8119417 complement(2219237..2220604) 1 NC_012912.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2220604 8119417 Dd1591_1940 Dickeya zeae Ech1591 adenylosuccinate lyase YP_003004268.1 2219237 R 561229 CDS YP_003004269.1 251789548 8119418 complement(2220808..2221440) 1 NC_012912.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2221440 8119418 Dd1591_1941 Dickeya zeae Ech1591 hypothetical protein YP_003004269.1 2220808 R 561229 CDS YP_003004270.1 251789549 8119419 complement(2221825..2222943) 1 NC_012912.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2222943 mnmA 8119419 mnmA Dickeya zeae Ech1591 tRNA-specific 2-thiouridylase MnmA YP_003004270.1 2221825 R 561229 CDS YP_003004271.1 251789550 8119420 complement(2223117..2223575) 1 NC_012912.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA2441 putative MutT family protein; NUDIX hydrolase 2223575 8119420 Dd1591_1943 Dickeya zeae Ech1591 NUDIX hydrolase YP_003004271.1 2223117 R 561229 CDS YP_003004272.1 251789551 8119261 complement(2223568..2224224) 1 NC_012912.1 PFAM: pseudouridine synthase; KEGG: eca:ECA2440 putative RNA pseudouridylate synthase; pseudouridine synthase 2224224 8119261 Dd1591_1944 Dickeya zeae Ech1591 pseudouridine synthase YP_003004272.1 2223568 R 561229 CDS YP_003004273.1 251789552 8119262 2224326..2225579 1 NC_012912.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2225579 8119262 Dd1591_1945 Dickeya zeae Ech1591 isocitrate dehydrogenase YP_003004273.1 2224326 D 561229 CDS YP_003004274.1 251789553 8119263 2226407..2228575 1 NC_012912.1 KEGG: eca:ECA2433 putative signaling protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor(s)-containing diguanylate cyclase/phosphodiesterase 2228575 8119263 Dd1591_1946 Dickeya zeae Ech1591 PAS/PAC and GAF sensor(s)-containing diguanylate cyclase/phosphodiesterase YP_003004274.1 2226407 D 561229 CDS YP_003004275.1 251789554 8119264 2229038..2229922 1 NC_012912.1 PFAM: HtpX domain protein; peptidase M48 Ste24p; KEGG: eca:ECA2427 heat shock protein HtpX; HtpX domain-containing protein 2229922 8119264 Dd1591_1947 Dickeya zeae Ech1591 HtpX domain-containing protein YP_003004275.1 2229038 D 561229 CDS YP_003004276.1 251789555 8119265 2230206..2231372 1 NC_012912.1 KEGG: eca:ECA2426 oligogalacturonate lyase; oligogalacturonide lyase 2231372 8119265 Dd1591_1948 Dickeya zeae Ech1591 oligogalacturonide lyase YP_003004276.1 2230206 D 561229 CDS YP_003004277.1 251789556 8119266 2231585..2232376 1 NC_012912.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: eca:ECA2425 pectin degradation repressor; IclR family transcriptional regulator 2232376 8119266 Dd1591_1949 Dickeya zeae Ech1591 IclR family transcriptional regulator YP_003004277.1 2231585 D 561229 CDS YP_003004278.1 251789557 8119267 2232544..2232834 1 NC_012912.1 KEGG: eca:ECA2424 hypothetical protein; hypothetical protein 2232834 8119267 Dd1591_1950 Dickeya zeae Ech1591 hypothetical protein YP_003004278.1 2232544 D 561229 CDS YP_003004279.1 251789558 8119268 2233155..2235083 1 NC_012912.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2235083 8119268 Dd1591_1951 Dickeya zeae Ech1591 threonyl-tRNA synthetase YP_003004279.1 2233155 D 561229 CDS YP_003004280.1 251789559 8119269 2235087..2235629 1 NC_012912.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2235629 infC 8119269 infC Dickeya zeae Ech1591 translation initiation factor IF-3 YP_003004280.1 2235087 D 561229 CDS YP_003004281.1 251789560 8119270 2235725..2235922 1 NC_012912.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: eta:ETA_18390 50S ribosomal protein L35; 50S ribosomal protein L35 2235922 rpmI 8119270 rpmI Dickeya zeae Ech1591 50S ribosomal protein L35 YP_003004281.1 2235725 D 561229 CDS YP_003004282.1 251789561 8119271 2235965..2236321 1 NC_012912.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: eca:ECA2419 50S ribosomal protein L20; 50S ribosomal protein L20 2236321 8119271 Dd1591_1954 Dickeya zeae Ech1591 50S ribosomal protein L20 YP_003004282.1 2235965 D 561229 CDS YP_003004283.1 251789562 8119272 2236712..2237695 1 NC_012912.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2237695 pheS 8119272 pheS Dickeya zeae Ech1591 phenylalanyl-tRNA synthetase subunit alpha YP_003004283.1 2236712 D 561229 CDS YP_003004284.1 251789563 8119273 2237711..2240098 1 NC_012912.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2240098 pheT 8119273 pheT Dickeya zeae Ech1591 phenylalanyl-tRNA synthetase subunit beta YP_003004284.1 2237711 D 561229 CDS YP_003004285.1 251789564 8119274 2240102..2240401 1 NC_012912.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2240401 ihfA 8119274 ihfA Dickeya zeae Ech1591 integration host factor subunit alpha YP_003004285.1 2240102 D 561229 CDS YP_003004286.1 251789565 8119275 complement(2240420..2240821) 1 NC_012912.1 KEGG: pmr:PMI1959 hypothetical protein; hypothetical protein 2240821 8119275 Dd1591_1958 Dickeya zeae Ech1591 hypothetical protein YP_003004286.1 2240420 R 561229 CDS YP_003004287.1 251789566 8119276 complement(2240903..2241796) 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2413 hypothetical protein; hypothetical protein 2241796 8119276 Dd1591_1959 Dickeya zeae Ech1591 hypothetical protein YP_003004287.1 2240903 R 561229 CDS YP_003004288.1 251789567 8119277 complement(2241886..2242710) 1 NC_012912.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2242710 nadE 8119277 nadE Dickeya zeae Ech1591 NAD synthetase YP_003004288.1 2241886 R 561229 CDS YP_003004289.1 251789568 8119278 2242935..2243264 1 NC_012912.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE 2243264 8119278 Dd1591_1961 Dickeya zeae Ech1591 DNA-binding transcriptional activator OsmE YP_003004289.1 2242935 D 561229 CDS YP_003004290.1 251789569 8119279 complement(2243325..2244716) 1 NC_012912.1 PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA2410 putative sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 2244716 8119279 Dd1591_1962 Dickeya zeae Ech1591 sodium:dicarboxylate symporter YP_003004290.1 2243325 R 561229 CDS YP_003004291.1 251789570 8119280 complement(2244859..2245437) 1 NC_012912.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: eca:ECA2409 hypothetical protein; hypothetical protein 2245437 8119280 Dd1591_1963 Dickeya zeae Ech1591 hypothetical protein YP_003004291.1 2244859 R 561229 CDS YP_003004292.1 251789571 8119281 complement(2245522..2246448) 1 NC_012912.1 KEGG: eca:ECA2408 pectin acetylesterase; pectin acetylesterase 2246448 8119281 Dd1591_1964 Dickeya zeae Ech1591 pectin acetylesterase YP_003004292.1 2245522 R 561229 CDS YP_003004293.1 251789572 8119282 complement(2246785..2247504) 1 NC_012912.1 PFAM: Oligogalacturonate-specific porin; KEGG: eca:ECA2407 oligogalacturonate-specific porin; oligogalacturonate-specific porin 2247504 8119282 Dd1591_1965 Dickeya zeae Ech1591 oligogalacturonate-specific porin YP_003004293.1 2246785 R 561229 CDS YP_003004294.1 251789573 8119283 complement(2247754..2249046) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein; extracellular solute-binding protein family 1 2249046 8119283 Dd1591_1966 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003004294.1 2247754 R 561229 CDS YP_003004295.1 251789574 8119284 complement(2249061..2250188) 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA2405 ABC transporter, ATP-binding component; ABC transporter 2250188 8119284 Dd1591_1967 Dickeya zeae Ech1591 ABC transporter YP_003004295.1 2249061 R 561229 CDS YP_003004296.1 251789575 8119285 complement(2250202..2251104) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_3290 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2251104 8119285 Dd1591_1968 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004296.1 2250202 R 561229 CDS YP_003004297.1 251789576 8119286 complement(2251097..2251987) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2403 binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transport systems inner membrane component 2251987 8119286 Dd1591_1969 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004297.1 2251097 R 561229 CDS YP_003004298.1 251789577 8119287 complement(2252032..2253663) 1 NC_012912.1 PFAM: periplasmic pectate lyase; KEGG: eca:ECA2402 pectate disaccharide-lyase; pectate disaccharide-lyase 2253663 8119287 Dd1591_1970 Dickeya zeae Ech1591 pectate disaccharide-lyase YP_003004298.1 2252032 R 561229 CDS YP_003004299.1 251789578 8119288 complement(2253925..2254686) 1 NC_012912.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 2254686 8119288 Dd1591_1971 Dickeya zeae Ech1591 2-deoxy-D-gluconate 3-dehydrogenase YP_003004299.1 2253925 R 561229 CDS YP_003004300.1 251789579 8119289 complement(2254855..2255691) 1 NC_012912.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2255691 8119289 Dd1591_1972 Dickeya zeae Ech1591 5-keto-4-deoxyuronate isomerase YP_003004300.1 2254855 R 561229 CDS YP_003004301.1 251789580 8119290 2256013..2256345 1 NC_012912.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: eca:ECA2399 pectin degradation protein; Cupin 2 barrel domain-containing protein 2256345 8119290 Dd1591_1973 Dickeya zeae Ech1591 Cupin 2 barrel domain-containing protein YP_003004301.1 2256013 D 561229 CDS YP_003004302.1 251789581 8119291 2256578..2257126 1 NC_012912.1 KEGG: eca:ECA2397 hypothetical protein; hypothetical protein 2257126 8119291 Dd1591_1974 Dickeya zeae Ech1591 hypothetical protein YP_003004302.1 2256578 D 561229 CDS YP_003004303.1 251789582 8119292 complement(2257175..2258032) 1 NC_012912.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: eca:ECA2396 putative fructosamine kinase; fructosamine kinase 2258032 8119292 Dd1591_1975 Dickeya zeae Ech1591 fructosamine kinase YP_003004303.1 2257175 R 561229 CDS YP_003004304.1 251789583 8119293 2258611..2259804 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: sfx:S4808 hypothetical protein; transposase IS4 family protein 2259804 8119293 Dd1591_1976 Dickeya zeae Ech1591 transposase IS4 family protein YP_003004304.1 2258611 D 561229 CDS YP_003004305.1 251789584 8119294 2260879..2261088 1 NC_012912.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eca:ECA2391 cold shock-like protein CspC; cold shock-like protein CspC 2261088 8119294 Dd1591_1977 Dickeya zeae Ech1591 cold shock-like protein CspC YP_003004305.1 2260879 D 561229 CDS YP_003004306.1 251789585 8119295 2261170..2261982 1 NC_012912.1 PFAM: Methyltransferase type 11; KEGG: eca:ECA2390 23S rRNA methyltransferase A; rRNA (guanine-N(1)-)-methyltransferase 2261982 8119295 Dd1591_1978 Dickeya zeae Ech1591 rRNA (guanine-N(1)-)-methyltransferase YP_003004306.1 2261170 D 561229 CDS YP_003004307.1 251789586 8119296 complement(2262226..2262798) 1 NC_012912.1 PFAM: protein of unknown function DUF204; KEGG: eca:ECA2389 hypothetical protein; hypothetical protein 2262798 8119296 Dd1591_1979 Dickeya zeae Ech1591 hypothetical protein YP_003004307.1 2262226 R 561229 CDS YP_003004308.1 251789587 8119297 complement(2263185..2263643) 1 NC_012912.1 PFAM: protein of unknown function DUF986; KEGG: ypi:YpsIP31758_2371 hypothetical protein; hypothetical protein 2263643 8119297 Dd1591_1980 Dickeya zeae Ech1591 hypothetical protein YP_003004308.1 2263185 R 561229 CDS YP_003004309.1 251789588 8119298 complement(2263754..2264590) 1 NC_012912.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 2264590 8119298 Dd1591_1981 Dickeya zeae Ech1591 PTS system mannose-specific transporter subunit IID YP_003004309.1 2263754 R 561229 CDS YP_003004310.1 251789589 8119299 complement(2264605..2265402) 1 NC_012912.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: eca:ECA2386 PTS system, mannose-specific IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC 2265402 8119299 Dd1591_1982 Dickeya zeae Ech1591 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_003004310.1 2264605 R 561229 CDS YP_003004311.1 251789590 8119300 complement(2265472..2266428) 1 NC_012912.1 KEGG: eca:ECA2385 PTS system, mannose-specific IIAB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; PTS system mannose/fructose/sorbose family transporter subunit IIB 2266428 8119300 Dd1591_1983 Dickeya zeae Ech1591 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_003004311.1 2265472 R 561229 CDS YP_003004312.1 251789591 8119301 2267024..2268577 1 NC_012912.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: eca:ECA2384 hypothetical protein; Integral membrane protein TerC 2268577 8119301 Dd1591_1984 Dickeya zeae Ech1591 Integral membrane protein TerC YP_003004312.1 2267024 D 561229 CDS YP_003004313.1 251789592 8119302 complement(2268781..2270142) 1 NC_012912.1 KEGG: eca:ECA2380 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 2270142 8119302 Dd1591_1985 Dickeya zeae Ech1591 L-serine dehydratase 1 YP_003004313.1 2268781 R 561229 CDS YP_003004314.1 251789593 8119303 complement(2270363..2271016) 1 NC_012912.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA2379 hypothetical protein; hypothetical protein 2271016 8119303 Dd1591_1986 Dickeya zeae Ech1591 hypothetical protein YP_003004314.1 2270363 R 561229 CDS YP_003004315.1 251789594 8119304 complement(2271032..2272402) 1 NC_012912.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: yen:YE1781 para-aminobenzoate synthase component I; para-aminobenzoate synthase subunit I 2272402 8119304 Dd1591_1987 Dickeya zeae Ech1591 para-aminobenzoate synthase subunit I YP_003004315.1 2271032 R 561229 CDS YP_003004316.1 251789595 8119305 2272556..2272744 1 NC_012912.1 PFAM: protein of unknown function UPF0181; KEGG: eum:ECUMN_2103 hypothetical protein; hypothetical protein 2272744 8119305 Dd1591_1988 Dickeya zeae Ech1591 hypothetical protein YP_003004316.1 2272556 D 561229 CDS YP_003004317.1 251789596 8119306 complement(2272784..2273131) 1 NC_012912.1 PFAM: Endoribonuclease L-PSP; KEGG: eca:ECA2376 putative endoribonuclease; Endoribonuclease L-PSP 2273131 8119306 Dd1591_1989 Dickeya zeae Ech1591 Endoribonuclease L-PSP YP_003004317.1 2272784 R 561229 CDS YP_003004318.1 251789597 8119307 2273306..2275255 1 NC_012912.1 SMART: helicase c2; DEAD-like helicase; KEGG: eca:ECA2375 putative ATP-dependent helicase; helicase c2 2275255 8119307 Dd1591_1990 Dickeya zeae Ech1591 helicase c2 YP_003004318.1 2273306 D 561229 CDS YP_003004319.1 251789598 8119308 2275321..2276022 1 NC_012912.1 PFAM: peptidase M22 glycoprotease; KEGG: eca:ECA2374 hypothetical protein; peptidase M22 glycoprotease 2276022 8119308 Dd1591_1991 Dickeya zeae Ech1591 peptidase M22 glycoprotease YP_003004319.1 2275321 D 561229 CDS YP_003004320.1 251789599 8119309 2276366..2276995 1 NC_012912.1 TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; KEGG: eca:ECA2373 outer membrane lipoprotein; outer membrane lipoprotein, Slp family 2276995 8119309 Dd1591_1992 Dickeya zeae Ech1591 outer membrane lipoprotein, Slp family YP_003004320.1 2276366 D 561229 CDS YP_003004321.1 251789600 8119310 2277180..2278883 1 NC_012912.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA2372 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 2278883 8119310 Dd1591_1993 Dickeya zeae Ech1591 AMP-dependent synthetase and ligase YP_003004321.1 2277180 D 561229 CDS YP_003004322.1 251789601 8119311 2279075..2280196 1 NC_012912.1 KEGG: eca:ECA2371 ribonuclease D; TIGRFAM: ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; ribonuclease D 2280196 8119311 Dd1591_1994 Dickeya zeae Ech1591 ribonuclease D YP_003004322.1 2279075 D 561229 CDS YP_003004323.1 251789602 8119312 complement(2280260..2280553) 1 NC_012912.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 2280553 minE 8119312 minE Dickeya zeae Ech1591 cell division topological specificity factor MinE YP_003004323.1 2280260 R 561229 CDS YP_003004324.1 251789603 8119313 complement(2280557..2281369) 1 NC_012912.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD 2281369 8119313 Dd1591_1996 Dickeya zeae Ech1591 cell division inhibitor MinD YP_003004324.1 2280557 R 561229 CDS YP_003004325.1 251789604 8119314 complement(2281390..2282088) 1 NC_012912.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 2282088 minC 8119314 minC Dickeya zeae Ech1591 septum formation inhibitor YP_003004325.1 2281390 R 561229 CDS YP_003004326.1 251789605 8119315 2282225..2282497 1 NC_012912.1 PFAM: protein of unknown function DUF709; KEGG: elf:LF82_2733 uncharacterized protein ycgl; hypothetical protein 2282497 8119315 Dd1591_1998 Dickeya zeae Ech1591 hypothetical protein YP_003004326.1 2282225 D 561229 CDS YP_003004327.1 251789606 8119316 2282880..2283536 1 NC_012912.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: eca:ECA2366 hypothetical protein; hypothetical protein 2283536 8119316 Dd1591_1999 Dickeya zeae Ech1591 hypothetical protein YP_003004327.1 2282880 D 561229 CDS YP_003004328.1 251789607 8119317 2283636..2284082 1 NC_012912.1 PFAM: protein of unknown function UPF0153; KEGG: eca:ECA2365 hypothetical protein; hypothetical protein 2284082 8119317 Dd1591_2000 Dickeya zeae Ech1591 hypothetical protein YP_003004328.1 2283636 D 561229 CDS YP_003004329.1 251789608 8119318 complement(2284238..2284768) 1 NC_012912.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 2284768 8119318 Dd1591_2001 Dickeya zeae Ech1591 disulfide bond formation protein B YP_003004329.1 2284238 R 561229 CDS YP_003004330.1 251789609 8119320 2285778..2286497 1 NC_012912.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2286497 8119320 Dd1591_2003 Dickeya zeae Ech1591 fatty acid metabolism regulator YP_003004330.1 2285778 D 561229 CDS YP_003004331.1 251789610 8119321 complement(2286573..2288108) 1 NC_012912.1 PFAM: SpoVR family protein; KEGG: eca:ECA2359 hypothetical protein; SpoVR family protein 2288108 8119321 Dd1591_2004 Dickeya zeae Ech1591 SpoVR family protein YP_003004331.1 2286573 R 561229 CDS YP_003004332.1 251789611 8119322 2288432..2289682 1 NC_012912.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2289682 8119322 Dd1591_2005 Dickeya zeae Ech1591 D-amino acid dehydrogenase small subunit YP_003004332.1 2288432 D 561229 CDS YP_003004333.1 251789612 8119324 2290080..2291288 1 NC_012912.1 PFAM: transposase mutator type; KEGG: yps:YPTB3311 putative transposase; transposase mutator type 2291288 8119324 Dd1591_2007 Dickeya zeae Ech1591 transposase mutator type YP_003004333.1 2290080 D 561229 CDS YP_003004334.1 251789613 8119325 2291630..2303020 1 NC_012912.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin putative; KEGG: ent:Ent638_0053 filamentous haemagglutinin outer membrane protein; filamentous hemagglutinin family outer membrane protein 2303020 8119325 Dd1591_2008 Dickeya zeae Ech1591 filamentous hemagglutinin family outer membrane protein YP_003004334.1 2291630 D 561229 CDS YP_003004335.1 251789614 8119326 2303017..2303322 1 NC_012912.1 KEGG: plu:plu1122 hypothetical protein; hypothetical protein 2303322 8119326 Dd1591_2009 Dickeya zeae Ech1591 hypothetical protein YP_003004335.1 2303017 D 561229 CDS YP_003004336.1 251789615 8119327 complement(2303578..2303790) 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3380 hypothetical protein; hypothetical protein 2303790 8119327 Dd1591_2010 Dickeya zeae Ech1591 hypothetical protein YP_003004336.1 2303578 R 561229 CDS YP_003004337.1 251789616 8119329 2304267..2304530 1 NC_012912.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: ecm:EcSMS35_3216 putative addiction module antidote protein, CC2985 family; putative CopG/Arc/MetJ family addiction module antidote protein 2304530 8119329 Dd1591_2012 Dickeya zeae Ech1591 putative CopG/Arc/MetJ family addiction module antidote protein YP_003004337.1 2304267 D 561229 CDS YP_003004338.1 251789617 8119330 complement(2304614..2305735) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2134 ABC transporter, substrate binding protein; extracellular solute-binding protein family 1 2305735 8119330 Dd1591_2013 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003004338.1 2304614 R 561229 CDS YP_003004339.1 251789618 8119331 complement(2306136..2306720) 1 NC_012912.1 KEGG: hypothetical protein LOC100013487; hypothetical protein 2306720 8119331 Dd1591_2014 Dickeya zeae Ech1591 hypothetical protein YP_003004339.1 2306136 R 561229 CDS YP_003004340.1 251789619 8119332 complement(2306875..2308068) 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: sfx:S4808 hypothetical protein; transposase IS4 family protein 2308068 8119332 Dd1591_2015 Dickeya zeae Ech1591 transposase IS4 family protein YP_003004340.1 2306875 R 561229 CDS YP_003004341.1 251789620 8119333 complement(2308505..2308684) 1 NC_012912.1 KEGG: eca:ECA2139 hypothetical protein; hypothetical protein 2308684 8119333 Dd1591_2016 Dickeya zeae Ech1591 hypothetical protein YP_003004341.1 2308505 R 561229 CDS YP_003004342.1 251789621 8119334 2308747..2310591 1 NC_012912.1 KEGG: pst:PSPTO_1405 type III helper protein HrpK1; hypothetical protein 2310591 8119334 Dd1591_2017 Dickeya zeae Ech1591 hypothetical protein YP_003004342.1 2308747 D 561229 CDS YP_003004343.1 251789622 8119335 complement(2310679..2311353) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: yen:YE3176 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2311353 8119335 Dd1591_2018 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003004343.1 2310679 R 561229 CDS YP_003004344.1 251789623 8119336 complement(2311539..2311871) 1 NC_012912.1 KEGG: eca:ECA2111 potential HrpW-specific chaperone; HrpW-specific chaperone 2311871 8119336 Dd1591_2019 Dickeya zeae Ech1591 HrpW-specific chaperone YP_003004344.1 2311539 R 561229 CDS YP_003004345.1 251789624 8119337 complement(2311885..2313609) 1 NC_012912.1 PFAM: Pectate lyase; KEGG: eca:ECA2112 type III effector protein; pectate lyase 2313609 8119337 Dd1591_2020 Dickeya zeae Ech1591 pectate lyase YP_003004345.1 2311885 R 561229 CDS YP_003004346.1 251789625 8119338 complement(2313744..2314760) 1 NC_012912.1 KEGG: eca:ECA2112 type III effector protein; type III effector protein 2314760 8119338 Dd1591_2021 Dickeya zeae Ech1591 type III effector protein YP_003004346.1 2313744 R 561229 CDS YP_003004347.1 251789626 8119339 2314998..2319902 1 NC_012912.1 KEGG: eca:ECA2113 putative avirulence protein; putative avirulence protein 2319902 8119339 Dd1591_2022 Dickeya zeae Ech1591 putative avirulence protein YP_003004347.1 2314998 D 561229 CDS YP_003004348.1 251789627 8119340 2319968..2320390 1 NC_012912.1 PFAM: DspFAvrF family protein; Tir chaperone family protein; KEGG: eca:ECA2114 putative avirulence protein; DspFAvrF family protein 2320390 8119340 Dd1591_2023 Dickeya zeae Ech1591 DspFAvrF family protein YP_003004348.1 2319968 D 561229 CDS YP_003004349.1 251789628 8119501 2320636..2324124 1 NC_012912.1 KEGG: pae:PA4285 exodeoxyribonuclease V gamma chain; TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; exodeoxyribonuclease V subunit gamma 2324124 8119501 Dd1591_2024 Dickeya zeae Ech1591 exodeoxyribonuclease V subunit gamma YP_003004349.1 2320636 D 561229 CDS YP_003004350.1 251789629 8119502 2324121..2327795 1 NC_012912.1 KEGG: pen:PSEEN0692 exonuclease V, beta subunit; TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta 2327795 8119502 Dd1591_2025 Dickeya zeae Ech1591 exodeoxyribonuclease V subunit beta YP_003004350.1 2324121 D 561229 CDS YP_003004351.1 251789630 8119503 2327792..2329837 1 NC_012912.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: bvi:Bcep1808_6232 DNA helicase/exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 2329837 8119503 Dd1591_2026 Dickeya zeae Ech1591 exodeoxyribonuclease V subunit alpha YP_003004351.1 2327792 D 561229 CDS YP_003004352.1 251789631 8119504 2330046..2331419 1 NC_012912.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 2331419 8119504 Dd1591_2027 Dickeya zeae Ech1591 ATP-dependent RNA helicase DbpA YP_003004352.1 2330046 D 561229 CDS YP_003004353.1 251789632 8119505 complement(2331538..2332659) 1 NC_012912.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bch:Bcen2424_6908 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 2332659 8119505 Dd1591_2028 Dickeya zeae Ech1591 NADH:flavin oxidoreductase/NADH oxidase YP_003004353.1 2331538 R 561229 CDS YP_003004354.1 251789633 8119506 complement(2332694..2333185) 1 NC_012912.1 KEGG: swi:Swit_3359 hypothetical protein; hypothetical protein 2333185 8119506 Dd1591_2029 Dickeya zeae Ech1591 hypothetical protein YP_003004354.1 2332694 R 561229 CDS YP_003004355.1 251789634 8119507 2333312..2334229 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: asa:ASA_0430 LysR family transcriptional regulator; LysR family transcriptional regulator 2334229 8119507 Dd1591_2030 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004355.1 2333312 D 561229 CDS YP_003004356.1 251789635 8119508 complement(2334297..2334917) 1 NC_012912.1 KEGG: aha:AHA_3221 TPR repeat-containing protein; TPR repeat-containing protein 2334917 8119508 Dd1591_2031 Dickeya zeae Ech1591 TPR repeat-containing protein YP_003004356.1 2334297 R 561229 CDS YP_003004357.1 251789636 8119509 complement(2334914..2335720) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: asa:ASA_1093 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2335720 8119509 Dd1591_2032 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003004357.1 2334914 R 561229 CDS YP_003004358.1 251789637 8119510 complement(2335707..2336372) 1 NC_012912.1 KEGG: asa:ASA_1094 hypothetical protein; putative transcriptional activator, TenA family 2336372 8119510 Dd1591_2033 Dickeya zeae Ech1591 putative transcriptional activator, TenA family YP_003004358.1 2335707 R 561229 CDS YP_003004359.1 251789638 8119511 complement(2336375..2337811) 1 NC_012912.1 PFAM: AMP-dependent synthetase and ligase; KEGG: aha:AHA_3218 long-chain acyl-CoA synthetases; AMP-dependent synthetase and ligase 2337811 8119511 Dd1591_2034 Dickeya zeae Ech1591 AMP-dependent synthetase and ligase YP_003004359.1 2336375 R 561229 CDS YP_003004360.1 251789639 8119512 complement(2337792..2338448) 1 NC_012912.1 KEGG: aha:AHA_3217 thermostable hemolysin; thermostable hemolysin 2338448 8119512 Dd1591_2035 Dickeya zeae Ech1591 thermostable hemolysin YP_003004360.1 2337792 R 561229 CDS YP_003004361.1 251789640 8119513 complement(2338722..2339762) 1 NC_012912.1 PFAM: Haemin-degrading family protein; KEGG: yps:YPTB0339 hemin degradation/transport protein HmuS; Hemin-degrading family protein 2339762 8119513 Dd1591_2036 Dickeya zeae Ech1591 Hemin-degrading family protein YP_003004361.1 2338722 R 561229 CDS YP_003004362.1 251789641 8119514 2340351..2341034 1 NC_012912.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0785 two component system response regulator; winged helix family two component transcriptional regulator 2341034 8119514 Dd1591_2037 Dickeya zeae Ech1591 winged helix family two component transcriptional regulator YP_003004362.1 2340351 D 561229 CDS YP_003004363.1 251789642 8119515 2341039..2342484 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA0786 two component system sensor kinase; histidine kinase 2342484 8119515 Dd1591_2038 Dickeya zeae Ech1591 histidine kinase YP_003004363.1 2341039 D 561229 CDS YP_003004364.1 251789643 8119516 2343452..2343670 1 NC_012912.1 PFAM: Flp/Fap pilin component; KEGG: mmw:Mmwyl1_0303 Flp/Fap pilin component; Flp/Fap pilin component 2343670 8119516 Dd1591_2039 Dickeya zeae Ech1591 Flp/Fap pilin component YP_003004364.1 2343452 D 561229 CDS YP_003004365.1 251789644 8119517 2343670..2344227 1 NC_012912.1 PFAM: peptidase A24A prepilin type IV; KEGG: eca:ECA0787 hypothetical protein; peptidase A24A prepilin type IV 2344227 8119517 Dd1591_2040 Dickeya zeae Ech1591 peptidase A24A prepilin type IV YP_003004365.1 2343670 D 561229 CDS YP_003004366.1 251789645 8119518 2344261..2345187 1 NC_012912.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: eca:ECA0788 hypothetical protein; Flp pilus assembly protein CpaB 2345187 8119518 Dd1591_2041 Dickeya zeae Ech1591 Flp pilus assembly protein CpaB YP_003004366.1 2344261 D 561229 CDS YP_003004367.1 251789646 8119519 2345256..2346680 1 NC_012912.1 PFAM: type II and III secretion system protein; KEGG: eca:ECA0789 hypothetical protein; type II and III secretion system protein 2346680 8119519 Dd1591_2042 Dickeya zeae Ech1591 type II and III secretion system protein YP_003004367.1 2345256 D 561229 CDS YP_003004368.1 251789647 8119520 2346695..2347366 1 NC_012912.1 TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: eca:ECA0790 putative lipoprotein; pilus biogenesis lipoprotein CpaD 2347366 8119520 Dd1591_2043 Dickeya zeae Ech1591 pilus biogenesis lipoprotein CpaD YP_003004368.1 2346695 D 561229 CDS YP_003004369.1 251789648 8119521 2347382..2348587 1 NC_012912.1 KEGG: eca:ECA0791 hypothetical protein; response regulator receiver protein 2348587 8119521 Dd1591_2044 Dickeya zeae Ech1591 response regulator receiver protein YP_003004369.1 2347382 D 561229 CDS YP_003004370.1 251789649 8119522 2348616..2349992 1 NC_012912.1 PFAM: type II secretion system protein E; KEGG: eca:ECA0792 putative type IV pilus protein; type II secretion system protein E 2349992 8119522 Dd1591_2045 Dickeya zeae Ech1591 type II secretion system protein E YP_003004370.1 2348616 D 561229 CDS YP_003004371.1 251789650 8119523 2350022..2350999 1 NC_012912.1 PFAM: type II secretion system protein; KEGG: eca:ECA0793 putative type IV pilus protein; type II secretion system protein 2350999 8119523 Dd1591_2046 Dickeya zeae Ech1591 type II secretion system protein YP_003004371.1 2350022 D 561229 CDS YP_003004372.1 251789651 8119524 2351012..2351968 1 NC_012912.1 PFAM: type II secretion system protein; KEGG: eca:ECA0794 putative type IV pilus protein; type II secretion system protein 2351968 8119524 Dd1591_2047 Dickeya zeae Ech1591 type II secretion system protein YP_003004372.1 2351012 D 561229 CDS YP_003004373.1 251789652 8119525 2352033..2352884 1 NC_012912.1 PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: eca:ECA0795 hypothetical protein; hypothetical protein 2352884 8119525 Dd1591_2048 Dickeya zeae Ech1591 hypothetical protein YP_003004373.1 2352033 D 561229 CDS YP_003004374.1 251789653 8119526 2352881..2353396 1 NC_012912.1 KEGG: eca:ECA0796 hypothetical protein; hypothetical protein 2353396 8119526 Dd1591_2049 Dickeya zeae Ech1591 hypothetical protein YP_003004374.1 2352881 D 561229 CDS YP_003004375.1 251789654 8119527 2353389..2354012 1 NC_012912.1 KEGG: eca:ECA0797 hypothetical protein; hypothetical protein 2354012 8119527 Dd1591_2050 Dickeya zeae Ech1591 hypothetical protein YP_003004375.1 2353389 D 561229 CDS YP_003004376.1 251789655 8119528 2354005..2355585 1 NC_012912.1 KEGG: eca:ECA0798 hypothetical protein; hypothetical protein 2355585 8119528 Dd1591_2051 Dickeya zeae Ech1591 hypothetical protein YP_003004376.1 2354005 D 561229 CDS YP_003004377.1 251789656 8119529 2355624..2363144 1 NC_012912.1 PFAM: Ig family protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: eca:ECA0799 putative outer membrane protein; Ig family protein 2363144 8119529 Dd1591_2052 Dickeya zeae Ech1591 Ig family protein YP_003004377.1 2355624 D 561229 CDS YP_003004378.1 251789657 8119530 2363165..2364982 1 NC_012912.1 KEGG: eca:ECA0800 hypothetical protein; hypothetical protein 2364982 8119530 Dd1591_2053 Dickeya zeae Ech1591 hypothetical protein YP_003004378.1 2363165 D 561229 CDS YP_003004379.1 251789658 8119531 2364979..2365770 1 NC_012912.1 PFAM: secretion protein HlyD family protein; KEGG: eca:ECA0801 hypothetical protein; secretion protein HlyD family protein 2365770 8119531 Dd1591_2054 Dickeya zeae Ech1591 secretion protein HlyD family protein YP_003004379.1 2364979 D 561229 CDS YP_003004380.1 251789659 8119532 2365760..2367088 1 NC_012912.1 KEGG: eca:ECA0802 hypothetical protein; hypothetical protein 2367088 8119532 Dd1591_2055 Dickeya zeae Ech1591 hypothetical protein YP_003004380.1 2365760 D 561229 CDS YP_003004381.1 251789660 8119533 2367095..2369224 1 NC_012912.1 KEGG: eca:ECA0803 hypothetical protein; hypothetical protein 2369224 8119533 Dd1591_2056 Dickeya zeae Ech1591 hypothetical protein YP_003004381.1 2367095 D 561229 CDS YP_003004382.1 251789661 8119534 complement(2369382..2369957) 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: sbp:Sbal223_2172 transcriptional regulator, TetR family; TetR family transcriptional regulator 2369957 8119534 Dd1591_2057 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003004382.1 2369382 R 561229 CDS YP_003004383.1 251789662 8119535 2370093..2371184 1 NC_012912.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sbp:Sbal223_2173 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 2371184 8119535 Dd1591_2058 Dickeya zeae Ech1591 NADH:flavin oxidoreductase/NADH oxidase YP_003004383.1 2370093 D 561229 CDS YP_003004384.1 251789663 8119536 2371256..2372038 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sbp:Sbal223_2174 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2372038 8119536 Dd1591_2059 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003004384.1 2371256 D 561229 CDS YP_003004385.1 251789664 8119537 2372111..2372923 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sbp:Sbal223_2175 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2372923 8119537 Dd1591_2060 Dickeya zeae Ech1591 short chain dehydrogenase YP_003004385.1 2372111 D 561229 CDS YP_003004386.1 251789665 8119538 2372934..2373341 1 NC_012912.1 KEGG: sbp:Sbal223_2176 hypothetical protein; hypothetical protein 2373341 8119538 Dd1591_2061 Dickeya zeae Ech1591 hypothetical protein YP_003004386.1 2372934 D 561229 CDS YP_003004387.1 251789666 8119539 2373338..2374342 1 NC_012912.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bac:BamMC406_5268 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 2374342 8119539 Dd1591_2062 Dickeya zeae Ech1591 alcohol dehydrogenase GroES domain-containing protein YP_003004387.1 2373338 D 561229 CDS YP_003004388.1 251789667 8119540 complement(2374604..2375695) 1 NC_012912.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2375695 8119540 Dd1591_2063 Dickeya zeae Ech1591 GTP-dependent nucleic acid-binding protein EngD YP_003004388.1 2374604 R 561229 CDS YP_003004389.1 251789668 8119541 complement(2375823..2376410) 1 NC_012912.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2376410 8119541 Dd1591_2064 Dickeya zeae Ech1591 peptidyl-tRNA hydrolase YP_003004389.1 2375823 R 561229 CDS YP_003004390.1 251789669 8119542 2376642..2376917 1 NC_012912.1 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein 2376917 8119542 Dd1591_2065 Dickeya zeae Ech1591 hypothetical protein YP_003004390.1 2376642 D 561229 CDS YP_003004391.1 251789670 8119543 complement(2377112..2378014) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: scl:sce5647 LysR family transcriptional regulator; LysR family transcriptional regulator 2378014 8119543 Dd1591_2066 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004391.1 2377112 R 561229 CDS YP_003004392.1 251789671 8119544 2378194..2378979 1 NC_012912.1 PFAM: ThiJ/PfpI domain protein; KEGG: xfm:Xfasm12_0479 NonF-related protein; ThiJ/PfpI domain-containing protein 2378979 8119544 Dd1591_2067 Dickeya zeae Ech1591 ThiJ/PfpI domain-containing protein YP_003004392.1 2378194 D 561229 CDS YP_003004393.1 251789672 8119545 complement(2379138..2380085) 1 NC_012912.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2380085 8119545 Dd1591_2068 Dickeya zeae Ech1591 ribose-phosphate pyrophosphokinase YP_003004393.1 2379138 R 561229 CDS YP_003004394.1 251789673 8119546 complement(2380214..2381086) 1 NC_012912.1 KEGG: eca:ECA2187 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 2381086 8119546 Dd1591_2069 Dickeya zeae Ech1591 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_003004394.1 2380214 R 561229 CDS YP_003004395.1 251789674 8119547 complement(2381090..2381710) 1 NC_012912.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 2381710 lolB 8119547 lolB Dickeya zeae Ech1591 outer membrane lipoprotein LolB YP_003004395.1 2381090 R 561229 CDS YP_003004396.1 251789675 8119548 2381921..2383177 1 NC_012912.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2383177 hemA 8119548 hemA Dickeya zeae Ech1591 glutamyl-tRNA reductase YP_003004396.1 2381921 D 561229 CDS YP_003004397.1 251789676 8119549 2383225..2384307 1 NC_012912.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2384307 prfA 8119549 prfA Dickeya zeae Ech1591 peptide chain release factor 1 YP_003004397.1 2383225 D 561229 CDS YP_003004398.1 251789677 8119550 2384307..2385158 1 NC_012912.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: eca:ECA2191 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; modification methylase, HemK family 2385158 8119550 Dd1591_2073 Dickeya zeae Ech1591 modification methylase, HemK family YP_003004398.1 2384307 D 561229 CDS YP_003004399.1 251789678 8119551 2385206..2385382 1 NC_012912.1 hypothetical protein 2385382 8119551 Dd1591_2074 Dickeya zeae Ech1591 hypothetical protein YP_003004399.1 2385206 D 561229 CDS YP_003004400.1 251789679 8119552 2385385..2386194 1 NC_012912.1 KEGG: eca:ECA2193 putative transcriptional regulator; putative transcriptional regulator 2386194 8119552 Dd1591_2075 Dickeya zeae Ech1591 putative transcriptional regulator YP_003004400.1 2385385 D 561229 CDS YP_003004401.1 251789680 8119553 2386251..2387105 1 NC_012912.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2387105 8119553 Dd1591_2076 Dickeya zeae Ech1591 2-dehydro-3-deoxyphosphooctonate aldolase YP_003004401.1 2386251 D 561229 CDS YP_003004402.1 251789681 8119554 complement(2387166..2388116) 1 NC_012912.1 PFAM: protein of unknown function DUF1471; KEGG: eca:ECA2203 hypothetical protein; hypothetical protein 2388116 8119554 Dd1591_2077 Dickeya zeae Ech1591 hypothetical protein YP_003004402.1 2387166 R 561229 CDS YP_003004403.1 251789682 8119555 2388627..2390156 1 NC_012912.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 2390156 pntA 8119555 pntA Dickeya zeae Ech1591 NAD(P) transhydrogenase subunit alpha YP_003004403.1 2388627 D 561229 CDS YP_003004404.1 251789683 8119556 2390182..2391555 1 NC_012912.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase 2391555 pntB 8119556 pntB Dickeya zeae Ech1591 pyridine nucleotide transhydrogenase YP_003004404.1 2390182 D 561229 CDS YP_003004405.1 251789684 8119557 complement(2391651..2392622) 1 NC_012912.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2392622 8119557 Dd1591_2080 Dickeya zeae Ech1591 universal stress protein UspE YP_003004405.1 2391651 R 561229 CDS YP_003004406.1 251789685 8119558 complement(2392756..2393508) 1 NC_012912.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2393508 8119558 Dd1591_2081 Dickeya zeae Ech1591 fumarate/nitrate reduction transcriptional regulator YP_003004406.1 2392756 R 561229 CDS YP_003004407.1 251789686 8119559 complement(2393672..2394211) 1 NC_012912.1 KEGG: eca:ECA2208 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA/protein-cysteine methyltransferase 2394211 8119559 Dd1591_2082 Dickeya zeae Ech1591 methylated-DNA/protein-cysteine methyltransferase YP_003004407.1 2393672 R 561229 CDS YP_003004408.1 251789687 8119560 complement(2394386..2396329) 1 NC_012912.1 PFAM: domain of unknown function DUF1745; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: esa:ESA_00603 hypothetical protein; methyl-accepting chemotaxis sensory transducer 2396329 8119560 Dd1591_2083 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004408.1 2394386 R 561229 CDS YP_003004409.1 251789688 8119562 2397539..2398111 1 NC_012912.1 KEGG: eca:ECA2172 hypothetical protein; hypothetical protein 2398111 8119562 Dd1591_2085 Dickeya zeae Ech1591 hypothetical protein YP_003004409.1 2397539 D 561229 CDS YP_003004410.1 251789689 8119563 2398315..2400276 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0080 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2400276 8119563 Dd1591_2086 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004410.1 2398315 D 561229 CDS YP_003004411.1 251789690 8119564 complement(2400355..2401632) 1 NC_012912.1 PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: ent:Ent638_1785 putative sugar-specific permease, SgaT/UlaA; putative sugar-specific permease SgaT/UlaA 2401632 8119564 Dd1591_2087 Dickeya zeae Ech1591 putative sugar-specific permease SgaT/UlaA YP_003004411.1 2400355 R 561229 CDS YP_003004412.1 251789691 8119565 complement(2401838..2402344) 1 NC_012912.1 PFAM: Phenolic acid decarboxylase; KEGG: kpe:KPK_0265 phenolic acid decarboxylase; Phenolic acid decarboxylase 2402344 8119565 Dd1591_2088 Dickeya zeae Ech1591 Phenolic acid decarboxylase YP_003004412.1 2401838 R 561229 CDS YP_003004413.1 251789692 8119566 2402485..2403381 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0068 LysR family transcriptional regulator; LysR family transcriptional regulator 2403381 8119566 Dd1591_2089 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004413.1 2402485 D 561229 CDS YP_003004414.1 251789693 8119567 complement(2403430..2404554) 1 NC_012912.1 PFAM: ROK family protein; KEGG: atc:AGR_L_609 hypothetical protein; ROK family protein 2404554 8119567 Dd1591_2090 Dickeya zeae Ech1591 ROK family protein YP_003004414.1 2403430 R 561229 CDS YP_003004415.1 251789694 8119568 2405093..2406172 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypb:YPTS_2074 ABC transporter related; ABC transporter 2406172 8119568 Dd1591_2091 Dickeya zeae Ech1591 ABC transporter YP_003004415.1 2405093 D 561229 CDS YP_003004416.1 251789695 8119569 2406169..2407023 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS0583 PotB protein; binding-protein-dependent transport systems inner membrane component 2407023 8119569 Dd1591_2092 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004416.1 2406169 D 561229 CDS YP_003004417.1 251789696 8119570 2407027..2407860 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asu:Asuc_1526 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2407860 8119570 Dd1591_2093 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004417.1 2407027 D 561229 CDS YP_003004418.1 251789697 8119571 2407899..2409032 1 NC_012912.1 KEGG: ypi:YpsIP31758_2059 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; putative spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein 2409032 8119571 Dd1591_2094 Dickeya zeae Ech1591 putative spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein YP_003004418.1 2407899 D 561229 CDS YP_003004419.1 251789698 8119572 2409160..2409918 1 NC_012912.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: psp:PSPPH_4534 glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2409918 8119572 Dd1591_2095 Dickeya zeae Ech1591 glycerophosphoryl diester phosphodiesterase YP_003004419.1 2409160 D 561229 CDS YP_003004420.1 251789699 8119573 2409934..2410698 1 NC_012912.1 PFAM: inositol monophosphatase; KEGG: pst:PSPTO_0659 inositol monophosphatase family protein; inositol monophosphatase 2410698 8119573 Dd1591_2096 Dickeya zeae Ech1591 inositol monophosphatase YP_003004420.1 2409934 D 561229 CDS YP_003004421.1 251789700 8119574 complement(2410771..2412327) 1 NC_012912.1 KEGG: rec:RHECIAT_PC0000667 hypothetical protein; hypothetical protein 2412327 8119574 Dd1591_2097 Dickeya zeae Ech1591 hypothetical protein YP_003004421.1 2410771 R 561229 CDS YP_003004422.1 251789701 8119575 complement(2412443..2414281) 1 NC_012912.1 KEGG: ret:RHE_PF00443 putative dehydrogenase large subunit protein; putative dehydrogenase large subunit protein 2414281 8119575 Dd1591_2098 Dickeya zeae Ech1591 putative dehydrogenase large subunit protein YP_003004422.1 2412443 R 561229 CDS YP_003004423.1 251789702 8119576 complement(2414278..2414736) 1 NC_012912.1 KEGG: rec:RHECIAT_PC0000668 hypothetical protein; hypothetical protein 2414736 8119576 Dd1591_2099 Dickeya zeae Ech1591 hypothetical protein YP_003004423.1 2414278 R 561229 CDS YP_003004424.1 251789703 8119577 complement(2415286..2417820) 1 NC_012912.1 KEGG: eca:ECA2217 putative virulence factor; putative virulence factor 2417820 8119577 Dd1591_2100 Dickeya zeae Ech1591 putative virulence factor YP_003004424.1 2415286 R 561229 CDS YP_003004425.1 251789704 8119578 complement(2417817..2420807) 1 NC_012912.1 PFAM: virulence protein SrfB; KEGG: eca:ECA2218 putative virulence effector protein; virulence protein SrfB 2420807 8119578 Dd1591_2101 Dickeya zeae Ech1591 virulence protein SrfB YP_003004425.1 2417817 R 561229 CDS YP_003004426.1 251789705 8119579 complement(2420810..2422138) 1 NC_012912.1 KEGG: eca:ECA2219 putative virulence effector protein; putative virulence effector protein 2422138 8119579 Dd1591_2102 Dickeya zeae Ech1591 putative virulence effector protein YP_003004426.1 2420810 R 561229 CDS YP_003004427.1 251789706 8119580 2422377..2422532 1 NC_012912.1 hypothetical protein 2422532 8119580 Dd1591_2103 Dickeya zeae Ech1591 hypothetical protein YP_003004427.1 2422377 D 561229 CDS YP_003004428.1 251789707 8118147 2422563..2423420 1 NC_012912.1 PFAM: NmrA family protein; TrkA-N domain protein; KEGG: yen:YE1738 hypothetical protein; NmrA family protein 2423420 8118147 Dd1591_2104 Dickeya zeae Ech1591 NmrA family protein YP_003004428.1 2422563 D 561229 CDS YP_003004429.1 251789708 8118149 2424451..2424762 1 NC_012912.1 PFAM: metalloprotease inhibitor I38; KEGG: eca:ECA2784 protease inhibitor; metalloprotease inhibitor I38 2424762 8118149 Dd1591_2106 Dickeya zeae Ech1591 metalloprotease inhibitor I38 YP_003004429.1 2424451 D 561229 CDS YP_003004430.1 251789709 8118150 2424779..2426506 1 NC_012912.1 KEGG: eca:ECA2783 protease secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 2426506 8118150 Dd1591_2107 Dickeya zeae Ech1591 type I secretion system ATPase YP_003004430.1 2424779 D 561229 CDS YP_003004431.1 251789710 8118151 2426520..2427866 1 NC_012912.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: eca:ECA2782 protease secretion protein; type I secretion membrane fusion protein, HlyD family 2427866 8118151 Dd1591_2108 Dickeya zeae Ech1591 type I secretion membrane fusion protein, HlyD family YP_003004431.1 2426520 D 561229 CDS YP_003004432.1 251789711 8118152 2427879..2429279 1 NC_012912.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: eca:ECA2781 protease secretion protein; type I secretion outer membrane protein, TolC family 2429279 8118152 Dd1591_2109 Dickeya zeae Ech1591 type I secretion outer membrane protein, TolC family YP_003004432.1 2427879 D 561229 CDS YP_003004433.1 251789712 8118153 2429447..2430889 1 NC_012912.1 KEGG: eca:ECA2785 metalloprotease; PFAM: Peptidase M10 serralysin ; Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; Serralysin 2430889 8118153 Dd1591_2110 Dickeya zeae Ech1591 Serralysin YP_003004433.1 2429447 D 561229 CDS YP_003004434.1 251789713 8118154 2431041..2432486 1 NC_012912.1 KEGG: eca:ECA2785 metalloprotease; PFAM: Peptidase M10 serralysin ; Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; Serralysin 2432486 8118154 Dd1591_2111 Dickeya zeae Ech1591 Serralysin YP_003004434.1 2431041 D 561229 CDS YP_003004435.1 251789714 8118155 2432905..2434341 1 NC_012912.1 KEGG: eca:ECA2785 metalloprotease; PFAM: Peptidase M10 serralysin ; Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; Serralysin 2434341 8118155 Dd1591_2112 Dickeya zeae Ech1591 Serralysin YP_003004435.1 2432905 D 561229 CDS YP_003004436.1 251789715 8118156 2434712..2435335 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: eta:ETA_17340 TetR-family transcriptional regulator; TetR family transcriptional regulator 2435335 8118156 Dd1591_2113 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003004436.1 2434712 D 561229 CDS YP_003004437.1 251789716 8118157 complement(2435910..2436575) 1 NC_012912.1 KEGG: eca:ECA1567 putative lipoprotein; putative lipoprotein 2436575 8118157 Dd1591_2114 Dickeya zeae Ech1591 putative lipoprotein YP_003004437.1 2435910 R 561229 CDS YP_003004438.1 251789717 8118158 complement(2436846..2437541) 1 NC_012912.1 PFAM: Rare lipoprotein A; KEGG: eca:ECA2220 putative cellulase; Rare lipoprotein A 2437541 8118158 Dd1591_2115 Dickeya zeae Ech1591 Rare lipoprotein A YP_003004438.1 2436846 R 561229 CDS YP_003004439.1 251789718 8118159 complement(2437836..2438804) 1 NC_012912.1 TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: cko:CKO_01466 potassium-tellurite ethidium and proflavin transporter; potassium-tellurite ethidium and proflavin transporter 2438804 8118159 Dd1591_2116 Dickeya zeae Ech1591 potassium-tellurite ethidium and proflavin transporter YP_003004439.1 2437836 R 561229 CDS YP_003004440.1 251789719 8118160 2439867..2440871 1 NC_012912.1 PFAM: acyltransferase 3; KEGG: rso:RSc3292 hypothetical protein; acyltransferase 3 2440871 8118160 Dd1591_2117 Dickeya zeae Ech1591 acyltransferase 3 YP_003004440.1 2439867 D 561229 CDS YP_003004441.1 251789720 8118161 2440981..2441325 1 NC_012912.1 PFAM: protein of unknown function DUF419; KEGG: pst:PSPTO_3016 hypothetical protein; hypothetical protein 2441325 8118161 Dd1591_2118 Dickeya zeae Ech1591 hypothetical protein YP_003004441.1 2440981 D 561229 CDS YP_003004442.1 251789721 8118162 complement(2441406..2442299) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2922 LysR family transcriptional regulator; LysR family transcriptional regulator 2442299 8118162 Dd1591_2119 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004442.1 2441406 R 561229 CDS YP_003004443.1 251789722 8118163 2442519..2442923 1 NC_012912.1 KEGG: eca:ECA1476 hypothetical protein; hypothetical protein 2442923 8118163 Dd1591_2120 Dickeya zeae Ech1591 hypothetical protein YP_003004443.1 2442519 D 561229 CDS YP_003004444.1 251789723 8118164 2443357..2444763 1 NC_012912.1 PFAM: Integrase catalytic region; KEGG: kpe:KPK_B0045 transposase; Integrase catalytic region 2444763 8118164 Dd1591_2121 Dickeya zeae Ech1591 Integrase catalytic region YP_003004444.1 2443357 D 561229 CDS YP_003004445.1 251789724 8118165 complement(2444818..2445126) 1 NC_012912.1 KEGG: shm:Shewmr7_1024 hypothetical protein; hypothetical protein 2445126 8118165 Dd1591_2122 Dickeya zeae Ech1591 hypothetical protein YP_003004445.1 2444818 R 561229 CDS YP_003004446.1 251789725 8118166 complement(2445339..2445659) 1 NC_012912.1 hypothetical protein 2445659 8118166 Dd1591_2123 Dickeya zeae Ech1591 hypothetical protein YP_003004446.1 2445339 R 561229 CDS YP_003004447.1 251789726 8118167 complement(2445689..2445859) 1 NC_012912.1 KEGG: spe:Spro_4949 helix-turn-helix domain-containing protein; putative transcription regulator with HTH domain 2445859 8118167 Dd1591_2124 Dickeya zeae Ech1591 putative transcription regulator with HTH domain YP_003004447.1 2445689 R 561229 CDS YP_003004448.1 251789727 8118168 complement(2445988..2446470) 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; KEGG: gbe:GbCGDNIH1_1161 transcriptional regulator, MarR family; HxlR family transcriptional regulator 2446470 8118168 Dd1591_2125 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003004448.1 2445988 R 561229 CDS YP_003004449.1 251789728 8118169 2446971..2447960 1 NC_012912.1 PFAM: NmrA family protein; KEGG: bph:Bphy_6079 NmrA family protein; NmrA family protein 2447960 8118169 Dd1591_2126 Dickeya zeae Ech1591 NmrA family protein YP_003004449.1 2446971 D 561229 CDS YP_003004450.1 251789729 8118171 2448404..2449225 1 NC_012912.1 TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: spe:Spro_2341 mannosyl-3-phosphoglycerate phosphatase; mannosyl-3-phosphoglycerate phosphatase family 2449225 8118171 Dd1591_2128 Dickeya zeae Ech1591 mannosyl-3-phosphoglycerate phosphatase family YP_003004450.1 2448404 D 561229 CDS YP_003004451.1 251789730 8118172 2449245..2450471 1 NC_012912.1 KEGG: eca:ECA2249 hypothetical protein; hypothetical protein 2450471 8118172 Dd1591_2129 Dickeya zeae Ech1591 hypothetical protein YP_003004451.1 2449245 D 561229 CDS YP_003004452.1 251789731 8118173 2450841..2451590 1 NC_012912.1 NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase 2451590 8118173 Dd1591_2130 Dickeya zeae Ech1591 3-hydroxy acid dehydrogenase YP_003004452.1 2450841 D 561229 CDS YP_003004453.1 251789732 8118174 2451819..2452175 1 NC_012912.1 KEGG: eca:ECA2253 hypothetical protein; hypothetical protein 2452175 8118174 Dd1591_2131 Dickeya zeae Ech1591 hypothetical protein YP_003004453.1 2451819 D 561229 CDS YP_003004454.1 251789733 8118175 complement(2452294..2452965) 1 NC_012912.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; putative dithiobiotin synthetase 2452965 8118175 Dd1591_2132 Dickeya zeae Ech1591 putative dithiobiotin synthetase YP_003004454.1 2452294 R 561229 CDS YP_003004455.1 251789734 8118176 complement(2453111..2454328) 1 NC_012912.1 PFAM: ROK family protein; KEGG: eca:ECA2258 transcriptional regulator; ROK family protein 2454328 8118176 Dd1591_2133 Dickeya zeae Ech1591 ROK family protein YP_003004455.1 2453111 R 561229 CDS YP_003004456.1 251789735 8118177 complement(2454444..2455358) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2259 LysR family transcriptional regulator; LysR family transcriptional regulator 2455358 8118177 Dd1591_2134 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004456.1 2454444 R 561229 CDS YP_003004457.1 251789736 8118178 2455470..2456747 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2260 putative transporter; major facilitator superfamily protein 2456747 8118178 Dd1591_2135 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003004457.1 2455470 D 561229 CDS YP_003004458.1 251789737 8118179 2456915..2457841 1 NC_012912.1 binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein 2457841 8118179 Dd1591_2136 Dickeya zeae Ech1591 DNA replication terminus site-binding protein YP_003004458.1 2456915 D 561229 CDS YP_003004459.1 251789738 8118180 complement(2457845..2459242) 1 NC_012912.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2459242 fumC 8118180 fumC Dickeya zeae Ech1591 fumarate hydratase YP_003004459.1 2457845 R 561229 CDS YP_003004460.1 251789739 8118181 2459420..2460604 1 NC_012912.1 KEGG: eca:ECA2263 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase, class I 2460604 8118181 Dd1591_2138 Dickeya zeae Ech1591 mannose-6-phosphate isomerase, class I YP_003004460.1 2459420 D 561229 CDS YP_003004461.1 251789740 8118182 2460799..2462352 1 NC_012912.1 PFAM: protein of unknown function DUF945; KEGG: eca:ECA2264 hypothetical protein; hypothetical protein 2462352 8118182 Dd1591_2139 Dickeya zeae Ech1591 hypothetical protein YP_003004461.1 2460799 D 561229 CDS YP_003004462.1 251789741 8118183 complement(2462484..2462948) 1 NC_012912.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ccs:CCNA_03270 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2462948 8118183 Dd1591_2140 Dickeya zeae Ech1591 AsnC family transcriptional regulator YP_003004462.1 2462484 R 561229 CDS YP_003004463.1 251789742 8118184 2463061..2464044 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_4055 hypothetical protein; hypothetical protein 2464044 8118184 Dd1591_2141 Dickeya zeae Ech1591 hypothetical protein YP_003004463.1 2463061 D 561229 CDS YP_003004464.1 251789743 8118185 2464276..2465289 1 NC_012912.1 KEGG: eca:ECA2266 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 2465289 8118185 Dd1591_2142 Dickeya zeae Ech1591 adenosine deaminase YP_003004464.1 2464276 D 561229 CDS YP_003004465.1 251789744 8118186 complement(2465398..2465856) 1 NC_012912.1 PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: eca:ECA2267 hypothetical protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein 2465856 8118186 Dd1591_2143 Dickeya zeae Ech1591 calcium/calmodulin dependent protein kinase II association-domain-containing protein YP_003004465.1 2465398 R 561229 CDS YP_003004466.1 251789745 8118187 complement(2466033..2467034) 1 NC_012912.1 PFAM: Bile acid:sodium symporter; KEGG: eca:ECA2268 putative sodium bile acid symporter; Bile acid:sodium symporter 2467034 8118187 Dd1591_2144 Dickeya zeae Ech1591 Bile acid:sodium symporter YP_003004466.1 2466033 R 561229 CDS YP_003004467.1 251789746 8118188 complement(2467190..2468239) 1 NC_012912.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: eca:ECA2269 putative oxidoreductase; putative oxidoreductase 2468239 8118188 Dd1591_2145 Dickeya zeae Ech1591 putative oxidoreductase YP_003004467.1 2467190 R 561229 CDS YP_003004468.1 251789747 8118189 complement(2468430..2469380) 1 NC_012912.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; AraC family transcriptional regulator 2469380 8118189 Dd1591_2146 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003004468.1 2468430 R 561229 CDS YP_003004469.1 251789748 8118190 complement(2469450..2470436) 1 NC_012912.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease protein 2470436 araH 8118190 araH Dickeya zeae Ech1591 L-arabinose transporter permease protein YP_003004469.1 2469450 R 561229 CDS YP_003004470.1 251789749 8118191 complement(2470454..2471977) 1 NC_012912.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2471977 araG 8118191 araG Dickeya zeae Ech1591 L-arabinose transporter ATP-binding protein YP_003004470.1 2470454 R 561229 CDS YP_003004471.1 251789750 8118192 complement(2472063..2473046) 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA2273 L-arabinose-binding periplasmic protein; periplasmic binding protein/LacI transcriptional regulator 2473046 8118192 Dd1591_2149 Dickeya zeae Ech1591 periplasmic binding protein/LacI transcriptional regulator YP_003004471.1 2472063 R 561229 CDS YP_003004472.1 251789751 8118193 2473429..2475114 1 NC_012912.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2475114 8118193 Dd1591_2150 Dickeya zeae Ech1591 ribulokinase YP_003004472.1 2473429 D 561229 CDS YP_003004473.1 251789752 8118194 2475168..2476679 1 NC_012912.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2476679 8118194 Dd1591_2151 Dickeya zeae Ech1591 L-arabinose isomerase YP_003004473.1 2475168 D 561229 CDS YP_003004474.1 251789753 8118195 complement(2476779..2478596) 1 NC_012912.1 PFAM: Rhamnogalacturonate lyase; KEGG: eca:ECA0804 rhamnogalacturonate lyase; Rhamnogalacturonate lyase 2478596 8118195 Dd1591_2152 Dickeya zeae Ech1591 Rhamnogalacturonate lyase YP_003004474.1 2476779 R 561229 CDS YP_003004475.1 251789754 8118196 2479051..2479266 1 NC_012912.1 YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; oriC-binding nucleoid-associated protein 2479266 8118196 Dd1591_2153 Dickeya zeae Ech1591 oriC-binding nucleoid-associated protein YP_003004475.1 2479051 D 561229 CDS YP_003004476.1 251789755 8118197 2479917..2480498 1 NC_012912.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: yen:YE1994 Na(+)-translocating NADH-quinone reductase subunit E; RnfABCDGE type electron transport complex subunit A 2480498 8118197 Dd1591_2154 Dickeya zeae Ech1591 RnfABCDGE type electron transport complex subunit A YP_003004476.1 2479917 D 561229 CDS YP_003004477.1 251789756 8118198 2480498..2481088 1 NC_012912.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2277 electron transport complex protein RnfB; RnfABCDGE type electron transport complex subunit B 2481088 8118198 Dd1591_2155 Dickeya zeae Ech1591 RnfABCDGE type electron transport complex subunit B YP_003004477.1 2480498 D 561229 CDS YP_003004478.1 251789757 8118199 2481081..2483102 1 NC_012912.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2278 electron transport complex protein RnfC; RnfABCDGE type electron transport complex subunit C 2483102 8118199 Dd1591_2156 Dickeya zeae Ech1591 RnfABCDGE type electron transport complex subunit C YP_003004478.1 2481081 D 561229 CDS YP_003004479.1 251789758 8118200 2483103..2484155 1 NC_012912.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: spe:Spro_2237 electron transport complex protein RnfD; RnfABCDGE type electron transport complex subunit D 2484155 8118200 Dd1591_2157 Dickeya zeae Ech1591 RnfABCDGE type electron transport complex subunit D YP_003004479.1 2483103 D 561229 CDS YP_003004480.1 251789759 8118201 2484165..2484797 1 NC_012912.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2484797 8118201 Dd1591_2158 Dickeya zeae Ech1591 electron transport complex protein RnfG YP_003004480.1 2484165 D 561229 CDS YP_003004481.1 251789760 8118202 2484794..2485486 1 NC_012912.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: eca:ECA2281 SoxR-reducing system protein RsxE; RnfABCDGE type electron transport complex subunit E 2485486 8118202 Dd1591_2159 Dickeya zeae Ech1591 RnfABCDGE type electron transport complex subunit E YP_003004481.1 2484794 D 561229 CDS YP_003004482.1 251789761 8118203 2485498..2486133 1 NC_012912.1 KEGG: stm:STM1453 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 2486133 8118203 Dd1591_2160 Dickeya zeae Ech1591 endonuclease III YP_003004482.1 2485498 D 561229 CDS YP_003004483.1 251789762 8118204 complement(2486265..2487239) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2284 transcriptional regulator CysB; LysR family transcriptional regulator 2487239 8118204 Dd1591_2161 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004483.1 2486265 R 561229 CDS YP_003004484.1 251789763 8118205 complement(2487574..2490177) 1 NC_012912.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2490177 8118205 Dd1591_2162 Dickeya zeae Ech1591 DNA topoisomerase I YP_003004484.1 2487574 R 561229 CDS YP_003004485.1 251789764 8118206 2490619..2490888 1 NC_012912.1 KEGG: eca:ECA2287 hypothetical protein; hypothetical protein 2490888 8118206 Dd1591_2163 Dickeya zeae Ech1591 hypothetical protein YP_003004485.1 2490619 D 561229 CDS YP_003004486.1 251789765 8118207 2491272..2491865 1 NC_012912.1 KEGG: plu:plu4748 hypothetical protein; hypothetical protein 2491865 8118207 Dd1591_2164 Dickeya zeae Ech1591 hypothetical protein YP_003004486.1 2491272 D 561229 CDS YP_003004487.1 251789766 8118208 complement(2492093..2492581) 1 NC_012912.1 KEGG: eca:ECA0368 hypothetical protein; hypothetical protein 2492581 8118208 Dd1591_2165 Dickeya zeae Ech1591 hypothetical protein YP_003004487.1 2492093 R 561229 CDS YP_003004488.1 251789767 8118209 complement(2493117..2494163) 1 NC_012912.1 SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 2494163 8118209 Dd1591_2166 Dickeya zeae Ech1591 putative periplasmic protease YP_003004488.1 2493117 R 561229 CDS YP_003004489.1 251789768 8118210 2494456..2495217 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA2289 short chain dehydrogenase; short chain dehydrogenase 2495217 8118210 Dd1591_2167 Dickeya zeae Ech1591 short chain dehydrogenase YP_003004489.1 2494456 D 561229 CDS YP_003004490.1 251789769 8118211 2495239..2495829 1 NC_012912.1 KEGG: ypy:YPK_2038 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2495829 8118211 Dd1591_2168 Dickeya zeae Ech1591 cob(I)alamin adenosyltransferase YP_003004490.1 2495239 D 561229 CDS YP_003004491.1 251789770 8118212 complement(2495886..2496791) 1 NC_012912.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 2496791 8118212 Dd1591_2169 Dickeya zeae Ech1591 23S rRNA pseudouridylate synthase B YP_003004491.1 2495886 R 561229 CDS YP_003004492.1 251789771 8118213 complement(2496995..2497615) 1 NC_012912.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: eca:ECA2292 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 2497615 8118213 Dd1591_2170 Dickeya zeae Ech1591 Sua5/YciO/YrdC/YwlC family protein YP_003004492.1 2496995 R 561229 CDS YP_003004493.1 251789772 8118214 complement(2497736..2498608) 1 NC_012912.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: eca:ECA2293 putative phosphoesterase; PHP domain-containing protein 2498608 8118214 Dd1591_2171 Dickeya zeae Ech1591 PHP domain-containing protein YP_003004493.1 2497736 R 561229 CDS YP_003004494.1 251789773 8118215 2498981..2500543 1 NC_012912.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2500543 8118215 Dd1591_2172 Dickeya zeae Ech1591 anthranilate synthase component I YP_003004494.1 2498981 D 561229 CDS YP_003004495.1 251789774 8118216 2500543..2501121 1 NC_012912.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2501121 8118216 Dd1591_2173 Dickeya zeae Ech1591 anthranilate synthase component II YP_003004495.1 2500543 D 561229 CDS YP_003004496.1 251789775 8118217 2501140..2502138 1 NC_012912.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2502138 trpD 8118217 trpD Dickeya zeae Ech1591 anthranilate phosphoribosyltransferase YP_003004496.1 2501140 D 561229 CDS YP_003004497.1 251789776 8118218 2502147..2503532 1 NC_012912.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2503532 8118218 Dd1591_2175 Dickeya zeae Ech1591 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_003004497.1 2502147 D 561229 CDS YP_003004498.1 251789777 8118219 2503550..2504740 1 NC_012912.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2504740 8118219 Dd1591_2176 Dickeya zeae Ech1591 tryptophan synthase subunit beta YP_003004498.1 2503550 D 561229 CDS YP_003004499.1 251789778 8118220 2504740..2505549 1 NC_012912.1 TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; KEGG: spe:Spro_2672 tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 2505549 8118220 Dd1591_2177 Dickeya zeae Ech1591 tryptophan synthase subunit alpha YP_003004499.1 2504740 D 561229 CDS YP_003004500.1 251789779 8118221 2505759..2506037 1 NC_012912.1 hypothetical protein 2506037 8118221 Dd1591_2178 Dickeya zeae Ech1591 hypothetical protein YP_003004500.1 2505759 D 561229 CDS YP_003004501.1 251789780 8118222 2506282..2507004 1 NC_012912.1 PFAM: Oligogalacturonate-specific porin; KEGG: eca:ECA2302 putative oligogalacturonate-specific porin; oligogalacturonate-specific porin 2507004 8118222 Dd1591_2179 Dickeya zeae Ech1591 oligogalacturonate-specific porin YP_003004501.1 2506282 D 561229 CDS YP_003004502.1 251789781 8118223 complement(2507118..2507750) 1 NC_012912.1 receptor for colicin S4; outer membrane protein W 2507750 8118223 Dd1591_2180 Dickeya zeae Ech1591 outer membrane protein W YP_003004502.1 2507118 R 561229 CDS YP_003004503.1 251789782 8118224 2508033..2508395 1 NC_012912.1 PFAM: protein of unknown function UPF0153; KEGG: kpe:KPK_3194 hypothetical protein; hypothetical protein 2508395 8118224 Dd1591_2181 Dickeya zeae Ech1591 hypothetical protein YP_003004503.1 2508033 D 561229 CDS YP_003004504.1 251789783 8118225 2508510..2509262 1 NC_012912.1 PFAM: protein of unknown function UPF0259; KEGG: eca:ECA2305 hypothetical protein; hypothetical protein 2509262 8118225 Dd1591_2182 Dickeya zeae Ech1591 hypothetical protein YP_003004504.1 2508510 D 561229 CDS YP_003004505.1 251789784 8118226 2509459..2510019 1 NC_012912.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: spe:Spro_2677 intracellular septation protein A; intracellular septation protein A 2510019 8118226 Dd1591_2183 Dickeya zeae Ech1591 intracellular septation protein A YP_003004505.1 2509459 D 561229 CDS YP_003004506.1 251789785 8119181 2510071..2510493 1 NC_012912.1 YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase 2510493 8119181 Dd1591_2184 Dickeya zeae Ech1591 acyl-CoA thioester hydrolase YP_003004506.1 2510071 D 561229 CDS YP_003004507.1 251789786 8119182 complement(2510573..2511322) 1 NC_012912.1 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transport protein TonB 2511322 8119182 Dd1591_2185 Dickeya zeae Ech1591 transport protein TonB YP_003004507.1 2510573 R 561229 CDS YP_003004508.1 251789787 8119183 2511525..2511821 1 NC_012912.1 PFAM: YCII-related; KEGG: eum:ECUMN_1550 putative enzyme; YCII-like protein 2511821 8119183 Dd1591_2186 Dickeya zeae Ech1591 YCII-like protein YP_003004508.1 2511525 D 561229 CDS YP_003004509.1 251789788 8119184 2511951..2513651 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA2317 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2513651 8119184 Dd1591_2187 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004509.1 2511951 D 561229 CDS YP_003004510.1 251789789 8119185 complement(2513719..2513895) 1 NC_012912.1 KEGG: ypi:YpsIP31758_1952 hypothetical protein; hypothetical protein 2513895 8119185 Dd1591_2188 Dickeya zeae Ech1591 hypothetical protein YP_003004510.1 2513719 R 561229 CDS YP_003004511.1 251789790 8119186 2514102..2515562 1 NC_012912.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2515562 cls 8119186 cls Dickeya zeae Ech1591 cardiolipin synthetase YP_003004511.1 2514102 D 561229 CDS YP_003004512.1 251789791 8119187 2515616..2515939 1 NC_012912.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 2515939 8119187 Dd1591_2190 Dickeya zeae Ech1591 dsDNA-mimic protein YP_003004512.1 2515616 D 561229 CDS YP_003004513.1 251789792 8119188 complement(2516046..2517050) 1 NC_012912.1 KEGG: eca:ECA2320 oligopeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase 2517050 8119188 Dd1591_2191 Dickeya zeae Ech1591 peptide ABC transporter ATPase YP_003004513.1 2516046 R 561229 CDS YP_003004514.1 251789793 8119189 complement(2517047..2518036) 1 NC_012912.1 KEGG: spe:Spro_2698 oligopeptide transporter ATP-binding component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide transporter ATP-binding component 2518036 oppD 8119189 oppD Dickeya zeae Ech1591 oligopeptide transporter ATP-binding component YP_003004514.1 2517047 R 561229 CDS YP_003004515.1 251789794 8119190 complement(2518053..2518961) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2322 oligopeptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 2518961 8119190 Dd1591_2193 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004515.1 2518053 R 561229 CDS YP_003004516.1 251789795 8119191 complement(2518974..2519894) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2323 oligopeptide transporter permease; oligopeptide transporter permease 2519894 oppB 8119191 oppB Dickeya zeae Ech1591 oligopeptide transporter permease YP_003004516.1 2518974 R 561229 CDS YP_003004517.1 251789796 8119192 complement(2519987..2521630) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2324 periplasmic oligopeptide-binding protein; extracellular solute-binding protein family 5 2521630 8119192 Dd1591_2195 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004517.1 2519987 R 561229 CDS YP_003004518.1 251789797 8119193 complement(2522641..2523285) 1 NC_012912.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ypi:YpsIP31758_1962 hypothetical protein; hypothetical protein 2523285 8119193 Dd1591_2196 Dickeya zeae Ech1591 hypothetical protein YP_003004518.1 2522641 R 561229 CDS YP_003004519.1 251789798 8119194 2523832..2526534 1 NC_012912.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: eca:ECA2326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2526534 8119194 Dd1591_2197 Dickeya zeae Ech1591 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_003004519.1 2523832 D 561229 CDS YP_003004520.1 251789799 8119195 complement(2527154..2527753) 1 NC_012912.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2527753 8119195 Dd1591_2198 Dickeya zeae Ech1591 thymidine kinase YP_003004520.1 2527154 R 561229 CDS YP_003004521.1 251789800 8119196 2528137..2528544 1 NC_012912.1 PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: spe:Spro_2706 global DNA-binding transcriptional dual regulator H-NS; histone family protein nucleoid-structuring protein H-NS 2528544 8119196 Dd1591_2199 Dickeya zeae Ech1591 histone family protein nucleoid-structuring protein H-NS YP_003004521.1 2528137 D 561229 CDS YP_003004522.1 251789801 8119197 complement(2528663..2529574) 1 NC_012912.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 2529574 8119197 Dd1591_2200 Dickeya zeae Ech1591 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_003004522.1 2528663 R 561229 CDS YP_003004523.1 251789802 8119198 complement(2529774..2530790) 1 NC_012912.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA2330 response regulator of RpoS; response regulator of RpoS 2530790 8119198 Dd1591_2201 Dickeya zeae Ech1591 response regulator of RpoS YP_003004523.1 2529774 R 561229 CDS YP_003004524.1 251789803 8119199 complement(2530843..2531757) 1 NC_012912.1 PFAM: Patatin; KEGG: eca:ECA2331 hypothetical protein; hypothetical protein 2531757 8119199 Dd1591_2202 Dickeya zeae Ech1591 hypothetical protein YP_003004524.1 2530843 R 561229 CDS YP_003004525.1 251789804 8119200 2531978..2532445 1 NC_012912.1 PFAM: SEC-C motif domain protein; KEGG: eca:ECA2332 hypothetical protein; hypothetical protein 2532445 8119200 Dd1591_2203 Dickeya zeae Ech1591 hypothetical protein YP_003004525.1 2531978 D 561229 CDS YP_003004526.1 251789805 8119201 2532525..2533376 1 NC_012912.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2533376 purU 8119201 purU Dickeya zeae Ech1591 formyltetrahydrofolate deformylase YP_003004526.1 2532525 D 561229 CDS YP_003004527.1 251789806 8119203 complement(2533818..2534438) 1 NC_012912.1 PFAM: protein of unknown function UPF0126; KEGG: eca:ECA2334 hypothetical protein; hypothetical protein 2534438 8119203 Dd1591_2205 Dickeya zeae Ech1591 hypothetical protein YP_003004527.1 2533818 R 561229 CDS YP_003004528.1 251789807 8119204 2534788..2535594 1 NC_012912.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_2715 exonuclease III; exodeoxyribonuclease III 2535594 8119204 Dd1591_2206 Dickeya zeae Ech1591 exodeoxyribonuclease III YP_003004528.1 2534788 D 561229 CDS YP_003004529.1 251789808 8119205 complement(2535633..2536025) 1 NC_012912.1 PFAM: protein of unknown function DUF1496; KEGG: eca:ECA2336 hypothetical protein; hypothetical protein 2536025 8119205 Dd1591_2207 Dickeya zeae Ech1591 hypothetical protein YP_003004529.1 2535633 R 561229 CDS YP_003004530.1 251789809 8119206 complement(2536031..2537956) 1 NC_012912.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 2537956 8119206 Dd1591_2208 Dickeya zeae Ech1591 DNA topoisomerase III YP_003004530.1 2536031 R 561229 CDS YP_003004531.1 251789810 8119207 complement(2538036..2538587) 1 NC_012912.1 PFAM: nitroreductase; KEGG: eca:ECA2338 hypothetical protein; hypothetical protein 2538587 8119207 Dd1591_2209 Dickeya zeae Ech1591 hypothetical protein YP_003004531.1 2538036 R 561229 CDS YP_003004532.1 251789811 8119208 2538853..2540703 1 NC_012912.1 TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: eca:ECA2339 protease 4; signal peptide peptidase SppA, 67K type 2540703 8119208 Dd1591_2210 Dickeya zeae Ech1591 signal peptide peptidase SppA, 67K type YP_003004532.1 2538853 D 561229 CDS YP_003004533.1 251789812 8119209 2540822..2541841 1 NC_012912.1 converts asparagine to aspartate and ammonia; cytoplasmic asparaginase I 2541841 ansA 8119209 ansA Dickeya zeae Ech1591 cytoplasmic asparaginase I YP_003004533.1 2540822 D 561229 CDS YP_003004534.1 251789813 8119210 2541896..2542537 1 NC_012912.1 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 2542537 8119210 Dd1591_2212 Dickeya zeae Ech1591 nicotinamidase/pyrazinamidase YP_003004534.1 2541896 D 561229 CDS YP_003004535.1 251789814 8119211 complement(2542583..2542858) 1 NC_012912.1 PFAM: protein of unknown function DUF1315; KEGG: eca:ECA2342 hypothetical protein; hypothetical protein 2542858 8119211 Dd1591_2213 Dickeya zeae Ech1591 hypothetical protein YP_003004535.1 2542583 R 561229 CDS YP_003004536.1 251789815 8119212 complement(2542924..2543340) 1 NC_012912.1 KEGG: ypi:YpsIP31758_1986 methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2543340 8119212 Dd1591_2214 Dickeya zeae Ech1591 methionine-R-sulfoxide reductase YP_003004536.1 2542924 R 561229 CDS YP_003004537.1 251789816 8119213 2543690..2544685 1 NC_012912.1 KEGG: yen:YE2265 glyceraldehyde 3-phosphate dehydrogenase A; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 2544685 8119213 Dd1591_2215 Dickeya zeae Ech1591 glyceraldehyde-3-phosphate dehydrogenase, type I YP_003004537.1 2543690 D 561229 CDS YP_003004538.1 251789817 8119214 2545111..2545983 1 NC_012912.1 PFAM: Aldose 1-epimerase; KEGG: eca:ECA2345 putative aldose 1-epimerase; aldose 1-epimerase 2545983 8119214 Dd1591_2216 Dickeya zeae Ech1591 aldose 1-epimerase YP_003004538.1 2545111 D 561229 CDS YP_003004539.1 251789818 8119215 complement(2546038..2546889) 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: eca:ECA2346 putative aldo/keto reductase; aldo/keto reductase 2546889 8119215 Dd1591_2217 Dickeya zeae Ech1591 aldo/keto reductase YP_003004539.1 2546038 R 561229 CDS YP_003004540.1 251789819 8119216 complement(2547067..2547816) 1 NC_012912.1 PFAM: MltA-interacting MipA family protein; KEGG: eca:ECA2347 MltA-interacting protein; MltA-interacting MipA family protein 2547816 8119216 Dd1591_2218 Dickeya zeae Ech1591 MltA-interacting MipA family protein YP_003004540.1 2547067 R 561229 CDS YP_003004541.1 251789820 8119217 2548269..2550203 1 NC_012912.1 PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: eca:ECA2348 hypothetical protein; putative serine protein kinase, PrkA 2550203 8119217 Dd1591_2219 Dickeya zeae Ech1591 putative serine protein kinase, PrkA YP_003004541.1 2548269 D 561229 CDS YP_003004542.1 251789821 8119218 2550222..2551517 1 NC_012912.1 PFAM: protein of unknown function DUF444; KEGG: eca:ECA2349 hypothetical protein; hypothetical protein 2551517 8119218 Dd1591_2220 Dickeya zeae Ech1591 hypothetical protein YP_003004542.1 2550222 D 561229 CDS YP_003004543.1 251789822 8119219 2551739..2552542 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1552 ABC transporter ATP-binding protein; ABC transporter 2552542 8119219 Dd1591_2221 Dickeya zeae Ech1591 ABC transporter YP_003004543.1 2551739 D 561229 CDS YP_003004544.1 251789823 8119220 2552547..2553365 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_2740 ABC transporter-related protein; ABC transporter 2553365 8119220 Dd1591_2222 Dickeya zeae Ech1591 ABC transporter YP_003004544.1 2552547 D 561229 CDS YP_003004545.1 251789824 8119221 2553391..2554899 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1549 putative ABC transporter substrate-binding protein; extracellular solute-binding protein family 5 2554899 8119221 Dd1591_2223 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004545.1 2553391 D 561229 CDS YP_003004546.1 251789825 8119222 2554896..2556644 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1548 putative transport system membrane protein; binding-protein-dependent transport systems inner membrane component 2556644 8119222 Dd1591_2224 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004546.1 2554896 D 561229 CDS YP_003004547.1 251789826 8119223 complement(2556742..2556990) 1 NC_012912.1 PFAM: Transglycosylase-associated protein; KEGG: eca:ECA2044 hypothetical protein; transglycosylase-associated protein 2556990 8119223 Dd1591_2225 Dickeya zeae Ech1591 transglycosylase-associated protein YP_003004547.1 2556742 R 561229 CDS YP_003004548.1 251789827 8119224 2557326..2558015 1 NC_012912.1 PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: ppd:Ppro_2565 DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease 2558015 8119224 Dd1591_2226 Dickeya zeae Ech1591 DNA/RNA non-specific endonuclease YP_003004548.1 2557326 D 561229 CDS YP_003004549.1 251789828 8119225 complement(2558073..2558276) 1 NC_012912.1 KEGG: yps:YPTB1832 hypothetical protein; hypothetical protein 2558276 8119225 Dd1591_2227 Dickeya zeae Ech1591 hypothetical protein YP_003004549.1 2558073 R 561229 CDS YP_003004550.1 251789829 8119226 complement(2558643..2559044) 1 NC_012912.1 KEGG: aca:ACP_1655 hypothetical protein; hypothetical protein 2559044 8119226 Dd1591_2228 Dickeya zeae Ech1591 hypothetical protein YP_003004550.1 2558643 R 561229 CDS YP_003004551.1 251789830 8119227 complement(2559284..2559547) 1 NC_012912.1 PFAM: protein of unknown function DUF1364; KEGG: kpe:KPK_2854 hypothetical protein; hypothetical protein 2559547 8119227 Dd1591_2229 Dickeya zeae Ech1591 hypothetical protein YP_003004551.1 2559284 R 561229 CDS YP_003004552.1 251789831 8119228 2559640..2559840 1 NC_012912.1 hypothetical protein 2559840 8119228 Dd1591_2230 Dickeya zeae Ech1591 hypothetical protein YP_003004552.1 2559640 D 561229 CDS YP_003004553.1 251789832 8119229 2560013..2560237 1 NC_012912.1 KEGG: sml:Smlt3111 hypothetical protein; hypothetical protein 2560237 8119229 Dd1591_2231 Dickeya zeae Ech1591 hypothetical protein YP_003004553.1 2560013 D 561229 CDS YP_003004554.1 251789833 8119230 complement(2560344..2560664) 1 NC_012912.1 PFAM: IS1 transposase; KEGG: sdy:SDY_2013 iso-IS1 ORF2; IS1 transposase 2560664 8119230 Dd1591_2232 Dickeya zeae Ech1591 IS1 transposase YP_003004554.1 2560344 R 561229 CDS YP_003004555.1 251789834 8119231 complement(2560681..2560935) 1 NC_012912.1 hypothetical protein 2560935 8119231 Dd1591_2233 Dickeya zeae Ech1591 hypothetical protein YP_003004555.1 2560681 R 561229 CDS YP_003004556.1 251789835 8119232 complement(2561713..2562051) 1 NC_012912.1 KEGG: eca:ECA2472 hypothetical protein; hypothetical protein 2562051 8119232 Dd1591_2234 Dickeya zeae Ech1591 hypothetical protein YP_003004556.1 2561713 R 561229 CDS YP_003004557.1 251789836 8119233 2562286..2562684 1 NC_012912.1 hypothetical protein 2562684 8119233 Dd1591_2235 Dickeya zeae Ech1591 hypothetical protein YP_003004557.1 2562286 D 561229 CDS YP_003004558.1 251789837 8119234 complement(2562869..2563378) 1 NC_012912.1 PFAM: Ferritin Dps family protein; KEGG: eca:ECA2473 ferritin; Ferroxidase 2563378 8119234 Dd1591_2236 Dickeya zeae Ech1591 Ferroxidase YP_003004558.1 2562869 R 561229 CDS YP_003004559.1 251789838 8119235 complement(2563636..2564511) 1 NC_012912.1 PFAM: copper resistance D domain protein; KEGG: seh:SeHA_C2088 copper resistance protein D; copper resistance D domain-containing protein 2564511 8119235 Dd1591_2237 Dickeya zeae Ech1591 copper resistance D domain-containing protein YP_003004559.1 2563636 R 561229 CDS YP_003004560.1 251789839 8119236 complement(2564536..2564916) 1 NC_012912.1 PFAM: copper resistance protein CopC; KEGG: sgl:SG1276 putative copper resistance protein; copper resistance protein CopC 2564916 8119236 Dd1591_2238 Dickeya zeae Ech1591 copper resistance protein CopC YP_003004560.1 2564536 R 561229 CDS YP_003004561.1 251789840 8119237 2565078..2565308 1 NC_012912.1 PFAM: DNA polymerase II beta subunit; KEGG: spe:Spro_1941 DNA polymerase III subunit theta; DNA polymerase II subunit beta 2565308 8119237 Dd1591_2239 Dickeya zeae Ech1591 DNA polymerase II subunit beta YP_003004561.1 2565078 D 561229 CDS YP_003004562.1 251789841 8119238 2565514..2565630 1 NC_012912.1 KEGG: ypg:YpAngola_A1627 hypothetical protein; hypothetical protein 2565630 8119238 Dd1591_2240 Dickeya zeae Ech1591 hypothetical protein YP_003004562.1 2565514 D 561229 CDS YP_003004563.1 251789842 8119239 complement(2565838..2567889) 1 NC_012912.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: eca:ECA2476 protease II; oligopeptidase B 2567889 8119239 Dd1591_2241 Dickeya zeae Ech1591 oligopeptidase B YP_003004563.1 2565838 R 561229 CDS YP_003004564.1 251789843 8119240 2568157..2569338 1 NC_012912.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 2569338 purT 8119240 purT Dickeya zeae Ech1591 phosphoribosylglycinamide formyltransferase 2 YP_003004564.1 2568157 D 561229 CDS YP_003004565.1 251789844 8119241 complement(2569415..2570056) 1 NC_012912.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2570056 8119241 Dd1591_2243 Dickeya zeae Ech1591 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_003004565.1 2569415 R 561229 CDS YP_003004566.1 251789845 8119242 complement(2570212..2571687) 1 NC_012912.1 KEGG: eca:ECA2479 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2571687 8119242 Dd1591_2244 Dickeya zeae Ech1591 glucose-6-phosphate 1-dehydrogenase YP_003004566.1 2570212 R 561229 CDS YP_003004567.1 251789846 8119243 2572053..2572922 1 NC_012912.1 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2572922 8119243 Dd1591_2245 Dickeya zeae Ech1591 DNA-binding transcriptional regulator HexR YP_003004567.1 2572053 D 561229 CDS YP_003004568.1 251789847 8119244 2573106..2574548 1 NC_012912.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2574548 8119244 Dd1591_2246 Dickeya zeae Ech1591 pyruvate kinase YP_003004568.1 2573106 D 561229 CDS YP_003004569.1 251789848 8119245 complement(2574717..2575139) 1 NC_012912.1 KEGG: hypothetical protein; hypothetical protein 2575139 8119245 Dd1591_2247 Dickeya zeae Ech1591 hypothetical protein YP_003004569.1 2574717 R 561229 CDS YP_003004570.1 251789849 8119246 complement(2575348..2575704) 1 NC_012912.1 similar to GK23239 gene product from transcript GK23239-RA; KEGG: GK23239 gene product from transcript GK23239-RA; hypothetical protein 2575704 8119246 Dd1591_2248 Dickeya zeae Ech1591 hypothetical protein YP_003004570.1 2575348 R 561229 CDS YP_003004571.1 251789850 8119247 complement(2576066..2577052) 1 NC_012912.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2577052 8119247 Dd1591_2249 Dickeya zeae Ech1591 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_003004571.1 2576066 R 561229 CDS YP_003004572.1 251789851 8119248 complement(2577200..2578612) 1 NC_012912.1 PFAM: Peptidase M23; Peptidoglycan-binding LysM; Opacity-associated protein A; Opacity-associated protein A domain protein; SMART: Peptidoglycan-binding LysM; KEGG: eca:ECA2483 hypothetical protein; hypothetical protein 2578612 8119248 Dd1591_2250 Dickeya zeae Ech1591 hypothetical protein YP_003004572.1 2577200 R 561229 CDS YP_003004573.1 251789852 8119249 complement(2578628..2579650) 1 NC_012912.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic component 2579650 znuA 8119249 znuA Dickeya zeae Ech1591 high-affinity zinc transporter periplasmic component YP_003004573.1 2578628 R 561229 CDS YP_003004574.1 251789853 8119250 2579726..2580484 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2485 high-affinity zinc transporter ATPase; ABC transporter 2580484 8119250 Dd1591_2252 Dickeya zeae Ech1591 ABC transporter YP_003004574.1 2579726 D 561229 CDS YP_003004575.1 251789854 8119251 2580481..2581266 1 NC_012912.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane component 2581266 znuB 8119251 znuB Dickeya zeae Ech1591 high-affinity zinc transporter membrane component YP_003004575.1 2580481 D 561229 CDS YP_003004576.1 251789855 8119252 complement(2581437..2582447) 1 NC_012912.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2582447 ruvB 8119252 ruvB Dickeya zeae Ech1591 Holliday junction DNA helicase RuvB YP_003004576.1 2581437 R 561229 CDS YP_003004577.1 251789856 8119253 complement(2582455..2583072) 1 NC_012912.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2583072 ruvA 8119253 ruvA Dickeya zeae Ech1591 Holliday junction DNA helicase RuvA YP_003004577.1 2582455 R 561229 CDS YP_003004578.1 251789857 8119255 2583588..2584913 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 2584913 8119255 Dd1591_2257 Dickeya zeae Ech1591 transposase IS4 family protein YP_003004578.1 2583588 D 561229 CDS YP_003004579.1 251789858 8119256 complement(2584899..2585810) 1 NC_012912.1 TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter; KEGG: esa:ESA_02056 hypothetical protein; high-affinity nickel-transporter 2585810 8119256 Dd1591_2258 Dickeya zeae Ech1591 high-affinity nickel-transporter YP_003004579.1 2584899 R 561229 CDS YP_003004580.1 251789859 8119257 complement(2586065..2586586) 1 NC_012912.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2586586 ruvC 8119257 ruvC Dickeya zeae Ech1591 Holliday junction resolvase YP_003004580.1 2586065 R 561229 CDS YP_003004581.1 251789860 8119258 complement(2586627..2587370) 1 NC_012912.1 PFAM: protein of unknown function DUF28; KEGG: eca:ECA2494 hypothetical protein; hypothetical protein 2587370 8119258 Dd1591_2260 Dickeya zeae Ech1591 hypothetical protein YP_003004581.1 2586627 R 561229 CDS YP_003004582.1 251789861 8119259 complement(2587442..2587891) 1 NC_012912.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2587891 ntpA 8119259 ntpA Dickeya zeae Ech1591 dATP pyrophosphohydrolase YP_003004582.1 2587442 R 561229 CDS YP_003004583.1 251789862 8119260 complement(2587893..2589683) 1 NC_012912.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2589683 aspS 8119260 aspS Dickeya zeae Ech1591 aspartyl-tRNA synthetase YP_003004583.1 2587893 R 561229 CDS YP_003004584.1 251789863 8118867 2590011..2590823 1 NC_012912.1 PFAM: protein of unknown function DUF72; KEGG: spe:Spro_2784 hypothetical protein; hypothetical protein 2590823 8118867 Dd1591_2263 Dickeya zeae Ech1591 hypothetical protein YP_003004584.1 2590011 D 561229 CDS YP_003004585.1 251789864 8118868 2590994..2591389 1 NC_012912.1 KEGG: eca:ECA2510 hypothetical protein; hypothetical protein 2591389 8118868 Dd1591_2264 Dickeya zeae Ech1591 hypothetical protein YP_003004585.1 2590994 D 561229 CDS YP_003004586.1 251789865 8118869 2591540..2592283 1 NC_012912.1 TIGRFAM: methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: spe:Spro_2786 putative methyltransferase; methyltransferase 2592283 8118869 Dd1591_2265 Dickeya zeae Ech1591 methyltransferase YP_003004586.1 2591540 D 561229 CDS YP_003004587.1 251789866 8118870 2592280..2593251 1 NC_012912.1 TIGRFAM: methyltransferase; PFAM: methyltransferase putative; KEGG: eca:ECA2512 hypothetical protein; methyltransferase 2593251 8118870 Dd1591_2266 Dickeya zeae Ech1591 methyltransferase YP_003004587.1 2592280 D 561229 CDS YP_003004588.1 251789867 8118871 complement(2593337..2593594) 1 NC_012912.1 hypothetical protein 2593594 8118871 Dd1591_2267 Dickeya zeae Ech1591 hypothetical protein YP_003004588.1 2593337 R 561229 CDS YP_003004589.1 251789868 8118872 complement(2593954..2594718) 1 NC_012912.1 PFAM: CutC family protein; KEGG: eca:ECA2518 copper homeostasis protein CutC; copper homeostasis protein CutC 2594718 8118872 Dd1591_2268 Dickeya zeae Ech1591 copper homeostasis protein CutC YP_003004589.1 2593954 R 561229 CDS YP_003004590.1 251789869 8118873 complement(2594923..2595495) 1 NC_012912.1 PFAM: protein of unknown function DUF991; KEGG: eca:ECA2519 hypothetical protein; hypothetical protein 2595495 8118873 Dd1591_2269 Dickeya zeae Ech1591 hypothetical protein YP_003004590.1 2594923 R 561229 CDS YP_003004591.1 251789870 8118874 2596196..2597926 1 NC_012912.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2597926 argS 8118874 argS Dickeya zeae Ech1591 arginyl-tRNA synthetase YP_003004591.1 2596196 D 561229 CDS YP_003004592.1 251789871 8118875 complement(2598021..2599613) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: rme:Rmet_0160 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2599613 8118875 Dd1591_2271 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004592.1 2598021 R 561229 CDS YP_003004593.1 251789872 8118876 complement(2599995..2601530) 1 NC_012912.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: eca:ECA2521 putative virulence factor; integral membrane protein MviN 2601530 8118876 Dd1591_2272 Dickeya zeae Ech1591 integral membrane protein MviN YP_003004593.1 2599995 R 561229 CDS YP_003004594.1 251789873 8118877 complement(2601736..2602659) 1 NC_012912.1 PFAM: oxidoreductase domain protein; KEGG: eca:ECA2522 putative virulence factor; oxidoreductase domain-containing protein 2602659 8118877 Dd1591_2273 Dickeya zeae Ech1591 oxidoreductase domain-containing protein YP_003004594.1 2601736 R 561229 CDS YP_003004595.1 251789874 8118878 complement(2602696..2603340) 1 NC_012912.1 PFAM: protein of unknown function DUF480; KEGG: efe:EFER_1862 hypothetical protein; hypothetical protein 2603340 8118878 Dd1591_2274 Dickeya zeae Ech1591 hypothetical protein YP_003004595.1 2602696 R 561229 CDS YP_003004596.1 251789875 8118879 complement(2603366..2603950) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2524 ribosomal-protein-S5-alanine N-acetyltransferase; ribosomal-protein-S5-alanine N-acetyltransferase 2603950 8118879 Dd1591_2275 Dickeya zeae Ech1591 ribosomal-protein-S5-alanine N-acetyltransferase YP_003004596.1 2603366 R 561229 CDS YP_003004597.1 251789876 8118880 2604274..2605470 1 NC_012912.1 Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 2605470 8118880 Dd1591_2276 Dickeya zeae Ech1591 multidrug resistance protein MdtH YP_003004597.1 2604274 D 561229 CDS YP_003004598.1 251789877 8118881 2605696..2606343 1 NC_012912.1 TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein; Glutathione S-transferase domain; KEGG: spe:Spro_2798 glutaredoxin 2; glutaredoxin, GrxB family 2606343 8118881 Dd1591_2277 Dickeya zeae Ech1591 glutaredoxin, GrxB family YP_003004598.1 2605696 D 561229 CDS YP_003004599.1 251789878 8118882 2606472..2607035 1 NC_012912.1 PFAM: protein of unknown function DUF1439; KEGG: eca:ECA2527 hypothetical protein; hypothetical protein 2607035 8118882 Dd1591_2278 Dickeya zeae Ech1591 hypothetical protein YP_003004599.1 2606472 D 561229 CDS YP_003004600.1 251789879 8118883 complement(2607083..2607685) 1 NC_012912.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein; cytoplasmic chaperone TorD family protein 2607685 8118883 Dd1591_2279 Dickeya zeae Ech1591 cytoplasmic chaperone TorD family protein YP_003004600.1 2607083 R 561229 CDS YP_003004601.1 251789880 8118884 complement(2607709..2608446) 1 NC_012912.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ypg:YpAngola_A2446 putative hydrolase; putative hydrolase 2608446 8118884 Dd1591_2280 Dickeya zeae Ech1591 putative hydrolase YP_003004601.1 2607709 R 561229 CDS YP_003004602.1 251789881 8118886 complement(2609479..2610126) 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: rce:RC1_2390 transcriptional regulator, TetR family protein; TetR family transcriptional regulator 2610126 8118886 Dd1591_2281 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003004602.1 2609479 R 561229 CDS YP_003004603.1 251789882 8118887 2610209..2611168 1 NC_012912.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein; NmrA family protein 2611168 8118887 Dd1591_2282 Dickeya zeae Ech1591 NmrA family protein YP_003004603.1 2610209 D 561229 CDS YP_003004604.1 251789883 8118888 complement(2611260..2612183) 1 NC_012912.1 PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: lch:Lcho_4307 AraC family transcriptional regulator; AraC family transcriptional regulator 2612183 8118888 Dd1591_2283 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003004604.1 2611260 R 561229 CDS YP_003004605.1 251789884 8118889 2612403..2613557 1 NC_012912.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_C7286 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 2613557 8118889 Dd1591_2284 Dickeya zeae Ech1591 NADH:flavin oxidoreductase/NADH oxidase YP_003004605.1 2612403 D 561229 CDS YP_003004606.1 251789885 8118890 complement(2614163..2614864) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dac:Daci_4383 short chain dehydrogenase; short chain dehydrogenase 2614864 8118890 Dd1591_2285 Dickeya zeae Ech1591 short chain dehydrogenase YP_003004606.1 2614163 R 561229 CDS YP_003004607.1 251789886 8118891 2615038..2615796 1 NC_012912.1 KEGG: sbm:Shew185_3355 hypothetical protein; hypothetical protein 2615796 8118891 Dd1591_2286 Dickeya zeae Ech1591 hypothetical protein YP_003004607.1 2615038 D 561229 CDS YP_003004608.1 251789887 8118892 2616132..2616554 1 NC_012912.1 hypothetical protein 2616554 8118892 Dd1591_2287 Dickeya zeae Ech1591 hypothetical protein YP_003004608.1 2616132 D 561229 CDS YP_003004609.1 251789888 8118893 complement(2616573..2617499) 1 NC_012912.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bur:Bcep18194_A3790 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Cyanoalanine nitrilase 2617499 8118893 Dd1591_2288 Dickeya zeae Ech1591 Cyanoalanine nitrilase YP_003004609.1 2616573 R 561229 CDS YP_003004610.1 251789889 8118894 2617601..2618536 1 NC_012912.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3789 LysR family transcriptional regulator; LysR family transcriptional regulator 2618536 8118894 Dd1591_2289 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004610.1 2617601 D 561229 CDS YP_003004611.1 251789890 8118895 complement(2618635..2619390) 1 NC_012912.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein GntR HTH; SMART: regulatory protein DeoR; KEGG: spe:Spro_2259 DeoR family transcriptional regulator; DeoR family transcriptional regulator 2619390 8118895 Dd1591_2290 Dickeya zeae Ech1591 DeoR family transcriptional regulator YP_003004611.1 2618635 R 561229 CDS YP_003004612.1 251789891 8118896 2619573..2620178 1 NC_012912.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_2260 NUDIX hydrolase; NUDIX hydrolase 2620178 8118896 Dd1591_2291 Dickeya zeae Ech1591 NUDIX hydrolase YP_003004612.1 2619573 D 561229 CDS YP_003004613.1 251789892 8118897 2620780..2621418 1 NC_012912.1 PFAM: ribonuclease T2; KEGG: pfl:PFL_3322 ribonuclease T2 family protein, putative; ribonuclease T2 2621418 8118897 Dd1591_2292 Dickeya zeae Ech1591 ribonuclease T2 YP_003004613.1 2620780 D 561229 CDS YP_003004614.1 251789893 8118898 2621637..2622125 1 NC_012912.1 PFAM: NUDIX hydrolase; KEGG: hypothetical protein; NUDIX hydrolase 2622125 8118898 Dd1591_2293 Dickeya zeae Ech1591 NUDIX hydrolase YP_003004614.1 2621637 D 561229 CDS YP_003004615.1 251789894 8118899 complement(2622181..2623293) 1 NC_012912.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bbt:BBta_2707 putative oxidoreductase; NADH:flavin oxidoreductase/NADH oxidase 2623293 8118899 Dd1591_2294 Dickeya zeae Ech1591 NADH:flavin oxidoreductase/NADH oxidase YP_003004615.1 2622181 R 561229 CDS YP_003004616.1 251789895 8118900 2623394..2623798 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; KEGG: bbt:BBta_2706 putative transcriptional regulator; HxlR family transcriptional regulator 2623798 8118900 Dd1591_2295 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003004616.1 2623394 D 561229 CDS YP_003004617.1 251789896 8118901 complement(2623841..2625496) 1 NC_012912.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase 2625496 8118901 Dd1591_2296 Dickeya zeae Ech1591 multicopper oxidase YP_003004617.1 2623841 R 561229 CDS YP_003004618.1 251789897 8118902 complement(2625646..2626986) 1 NC_012912.1 PFAM: FAD dependent oxidoreductase; KEGG: eca:ECA0052 hypothetical protein; FAD dependent oxidoreductase 2626986 8118902 Dd1591_2297 Dickeya zeae Ech1591 FAD dependent oxidoreductase YP_003004618.1 2625646 R 561229 CDS YP_003004619.1 251789898 8118903 complement(2627062..2628501) 1 NC_012912.1 hypothetical protein 2628501 8118903 Dd1591_2298 Dickeya zeae Ech1591 hypothetical protein YP_003004619.1 2627062 R 561229 CDS YP_003004620.1 251789899 8118904 complement(2628817..2633253) 1 NC_012912.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 2633253 mukB 8118904 mukB Dickeya zeae Ech1591 cell division protein MukB YP_003004620.1 2628817 R 561229 CDS YP_003004621.1 251789900 8118905 complement(2633250..2633984) 1 NC_012912.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 2633984 8118905 Dd1591_2300 Dickeya zeae Ech1591 condesin subunit E YP_003004621.1 2633250 R 561229 CDS YP_003004622.1 251789901 8118906 complement(2633965..2635287) 1 NC_012912.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 2635287 8118906 Dd1591_2301 Dickeya zeae Ech1591 condesin subunit F YP_003004622.1 2633965 R 561229 CDS YP_003004623.1 251789902 8118907 complement(2635284..2636120) 1 NC_012912.1 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; putative metallothionein SmtA 2636120 8118907 Dd1591_2302 Dickeya zeae Ech1591 putative metallothionein SmtA YP_003004623.1 2635284 R 561229 CDS YP_003004624.1 251789903 8118908 2636258..2637034 1 NC_012912.1 PFAM: protein of unknown function DUF218; KEGG: eca:ECA2551 hypothetical protein; hypothetical protein 2637034 8118908 Dd1591_2303 Dickeya zeae Ech1591 hypothetical protein YP_003004624.1 2636258 D 561229 CDS YP_003004625.1 251789904 8118909 complement(2637075..2637971) 1 NC_012912.1 KEGG: eca:ECA2552 hypothetical protein; hypothetical protein 2637971 8118909 Dd1591_2304 Dickeya zeae Ech1591 hypothetical protein YP_003004625.1 2637075 R 561229 CDS YP_003004626.1 251789905 8118910 complement(2638277..2639596) 1 NC_012912.1 KEGG: eca:ECA2553 pectate lyase; pectate lyase 2639596 8118910 Dd1591_2305 Dickeya zeae Ech1591 pectate lyase YP_003004626.1 2638277 R 561229 CDS YP_003004627.1 251789906 8118911 complement(2639881..2640633) 1 NC_012912.1 KEGG: eca:ECA2554 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 2640633 8118911 Dd1591_2306 Dickeya zeae Ech1591 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_003004627.1 2639881 R 561229 CDS YP_003004628.1 251789907 8118912 complement(2640630..2640812) 1 NC_012912.1 PFAM: protein of unknown function DUF343; KEGG: eca:ECA2555 hypothetical protein; hypothetical protein 2640812 8118912 Dd1591_2307 Dickeya zeae Ech1591 hypothetical protein YP_003004628.1 2640630 R 561229 CDS YP_003004629.1 251789908 8118913 complement(2640852..2641865) 1 NC_012912.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2641865 lpxK 8118913 lpxK Dickeya zeae Ech1591 tetraacyldisaccharide 4'-kinase YP_003004629.1 2640852 R 561229 CDS YP_003004630.1 251789909 8118914 complement(2641862..2643610) 1 NC_012912.1 involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding/permease protein 2643610 8118914 Dd1591_2309 Dickeya zeae Ech1591 lipid transporter ATP-binding/permease protein YP_003004630.1 2641862 R 561229 CDS YP_003004631.1 251789910 8118915 complement(2643649..2646030) 1 NC_012912.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: eca:ECA2558 hypothetical protein; hypothetical protein 2646030 8118915 Dd1591_2310 Dickeya zeae Ech1591 hypothetical protein YP_003004631.1 2643649 R 561229 CDS YP_003004632.1 251789911 8118916 2646249..2646614 1 NC_012912.1 hypothetical protein 2646614 8118916 Dd1591_2311 Dickeya zeae Ech1591 hypothetical protein YP_003004632.1 2646249 D 561229 CDS YP_003004633.1 251789912 8118917 complement(2646683..2647021) 1 NC_012912.1 PFAM: protein of unknown function DUF496; KEGG: eca:ECA2560 hypothetical protein; hypothetical protein 2647021 8118917 Dd1591_2312 Dickeya zeae Ech1591 hypothetical protein YP_003004633.1 2646683 R 561229 CDS YP_003004634.1 251789913 8118918 2647427..2648857 1 NC_012912.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 2648857 sbcB 8118918 sbcB Dickeya zeae Ech1591 exonuclease I YP_003004634.1 2647427 D 561229 CDS YP_003004635.1 251789914 8118919 complement(2649005..2650366) 1 NC_012912.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_13600 putative amino acid permease; amino acid permease-like protein 2650366 8118919 Dd1591_2314 Dickeya zeae Ech1591 amino acid permease-like protein YP_003004635.1 2649005 R 561229 CDS YP_003004636.1 251789915 8118920 complement(2650356..2650520) 1 NC_012912.1 hypothetical protein 2650520 8118920 Dd1591_2315 Dickeya zeae Ech1591 hypothetical protein YP_003004636.1 2650356 R 561229 CDS YP_003004637.1 251789916 8118921 complement(2650842..2651594) 1 NC_012912.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: eca:ECA2568 hypothetical protein; YcgR family protein 2651594 8118921 Dd1591_2316 Dickeya zeae Ech1591 YcgR family protein YP_003004637.1 2650842 R 561229 CDS YP_003004638.1 251789917 8118922 complement(2651821..2652729) 1 NC_012912.1 KEGG: eca:ECA2569 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase CitG 2652729 8118922 Dd1591_2317 Dickeya zeae Ech1591 triphosphoribosyl-dephospho-CoA synthase CitG YP_003004638.1 2651821 R 561229 CDS YP_003004639.1 251789918 8118923 complement(2652707..2653249) 1 NC_012912.1 KEGG: eca:ECA2570 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; holo-ACP synthase CitX 2653249 8118923 Dd1591_2318 Dickeya zeae Ech1591 holo-ACP synthase CitX YP_003004639.1 2652707 R 561229 CDS YP_003004640.1 251789919 8118924 complement(2653246..2654775) 1 NC_012912.1 KEGG: eca:ECA2571 citrate lyase alpha chain; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; citrate lyase subunit alpha 2654775 8118924 Dd1591_2319 Dickeya zeae Ech1591 citrate lyase subunit alpha YP_003004640.1 2653246 R 561229 CDS YP_003004641.1 251789920 8118925 complement(2654860..2655765) 1 NC_012912.1 KEGG: eca:ECA2572 citrate lyase beta chain; TIGRFAM: citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase; citrate lyase subunit beta 2655765 8118925 Dd1591_2320 Dickeya zeae Ech1591 citrate lyase subunit beta YP_003004641.1 2654860 R 561229 CDS YP_003004642.1 251789921 8118926 complement(2655765..2656055) 1 NC_012912.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 2656055 8118926 Dd1591_2321 Dickeya zeae Ech1591 citrate lyase subunit gamma YP_003004642.1 2655765 R 561229 CDS YP_003004643.1 251789922 8118927 complement(2656089..2657132) 1 NC_012912.1 KEGG: eca:ECA2574 [citrate [pro-3s]-lyase] ligase; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; PFAM: Citrate lyase ligase domain protein; GCN5-related N-acetyltransferase; cytidylyltransferase; SMART: Citrate lyase ligase domain protein; citrate lyase ligase 2657132 8118927 Dd1591_2322 Dickeya zeae Ech1591 citrate lyase ligase YP_003004643.1 2656089 R 561229 CDS YP_003004644.1 251789923 8118928 complement(2657205..2658089) 1 NC_012912.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: eca:ECA2575 putative fumarylacetoacetate hydrolase; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 2658089 8118928 Dd1591_2323 Dickeya zeae Ech1591 5-carboxymethyl-2-hydroxymuconate Delta-isomerase YP_003004644.1 2657205 R 561229 CDS YP_003004645.1 251789924 8118929 complement(2658156..2659523) 1 NC_012912.1 PFAM: Citrate carrier protein; KEGG: eca:ECA2576 citrate/acetate antiporter; Citrate carrier protein 2659523 8118929 Dd1591_2324 Dickeya zeae Ech1591 Citrate carrier protein YP_003004645.1 2658156 R 561229 CDS YP_003004646.1 251789925 8118930 2660076..2661671 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; KEGG: eca:ECA2577 two-component sensor kinase; signal transduction histidine kinase regulating citrate/malate metabolism 2661671 8118930 Dd1591_2325 Dickeya zeae Ech1591 signal transduction histidine kinase regulating citrate/malate metabolism YP_003004646.1 2660076 D 561229 CDS YP_003004647.1 251789926 8118931 2661696..2662421 1 NC_012912.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA2578 two-component response regulator; response regulator receiver 2662421 8118931 Dd1591_2326 Dickeya zeae Ech1591 response regulator receiver YP_003004647.1 2661696 D 561229 CDS YP_003004648.1 251789927 8118932 2662790..2664757 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA2580 putative methyl-accepting chemotaxis citrate transducer; methyl-accepting chemotaxis sensory transducer 2664757 8118932 Dd1591_2327 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004648.1 2662790 D 561229 CDS YP_003004649.1 251789928 8118933 complement(2664867..2665688) 1 NC_012912.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: yen:YE2764 hypothetical protein; NAD-dependent epimerase/dehydratase 2665688 8118933 Dd1591_2328 Dickeya zeae Ech1591 NAD-dependent epimerase/dehydratase YP_003004649.1 2664867 R 561229 CDS YP_003004650.1 251789929 8118934 2666091..2666990 1 NC_012912.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2666990 hisG 8118934 hisG Dickeya zeae Ech1591 ATP phosphoribosyltransferase YP_003004650.1 2666091 D 561229 CDS YP_003004651.1 251789930 8118935 2666995..2668305 1 NC_012912.1 KEGG: eca:ECA2583 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase; histidinol dehydrogenase 2668305 8118935 Dd1591_2330 Dickeya zeae Ech1591 histidinol dehydrogenase YP_003004651.1 2666995 D 561229 CDS YP_003004652.1 251789931 8118936 2668302..2669372 1 NC_012912.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2669372 8118936 Dd1591_2331 Dickeya zeae Ech1591 histidinol-phosphate aminotransferase YP_003004652.1 2668302 D 561229 CDS YP_003004653.1 251789932 8118937 2669387..2670454 1 NC_012912.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2670454 8118937 Dd1591_2332 Dickeya zeae Ech1591 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_003004653.1 2669387 D 561229 CDS YP_003004654.1 251789933 8118938 2670454..2671044 1 NC_012912.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2671044 hisH 8118938 hisH Dickeya zeae Ech1591 imidazole glycerol phosphate synthase subunit HisH YP_003004654.1 2670454 D 561229 CDS YP_003004655.1 251789934 8118939 2671051..2671788 1 NC_012912.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2671788 8118939 Dd1591_2334 Dickeya zeae Ech1591 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_003004655.1 2671051 D 561229 CDS YP_003004656.1 251789935 8118940 2671770..2672546 1 NC_012912.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2672546 8118940 Dd1591_2335 Dickeya zeae Ech1591 imidazole glycerol phosphate synthase subunit HisF YP_003004656.1 2671770 D 561229 CDS YP_003004657.1 251789936 8118941 2672540..2673154 1 NC_012912.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase; KEGG: eca:ECA2589 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; phosphoribosyl-ATP diphosphatase 2673154 8118941 Dd1591_2336 Dickeya zeae Ech1591 phosphoribosyl-ATP diphosphatase YP_003004657.1 2672540 D 561229 CDS YP_003004658.1 251789937 8118942 2673486..2674136 1 NC_012912.1 KEGG: plu:plu3101 hypothetical protein; hypothetical protein 2674136 8118942 Dd1591_2337 Dickeya zeae Ech1591 hypothetical protein YP_003004658.1 2673486 D 561229 CDS YP_003004659.1 251789938 8118943 complement(2674288..2674572) 1 NC_012912.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2674572 ihfB 8118943 ihfB Dickeya zeae Ech1591 integration host factor subunit beta YP_003004659.1 2674288 R 561229 CDS YP_003004660.1 251789939 8118944 complement(2674664..2676373) 1 NC_012912.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2676373 rpsA 8118944 rpsA Dickeya zeae Ech1591 30S ribosomal protein S1 YP_003004660.1 2674664 R 561229 CDS YP_003004661.1 251789940 8118945 complement(2676443..2677132) 1 NC_012912.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2677132 cmk 8118945 cmk Dickeya zeae Ech1591 cytidylate kinase YP_003004661.1 2676443 R 561229 CDS YP_003004662.1 251789941 8118946 complement(2677325..2678614) 1 NC_012912.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2678614 8118946 Dd1591_2341 Dickeya zeae Ech1591 3-phosphoshikimate 1-carboxyvinyltransferase YP_003004662.1 2677325 R 561229 CDS YP_003004663.1 251789942 8120754 complement(2678714..2679799) 1 NC_012912.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2679799 8120754 Dd1591_2342 Dickeya zeae Ech1591 phosphoserine aminotransferase YP_003004663.1 2678714 R 561229 CDS YP_003004664.1 251789943 8120755 2680066..2681829 1 NC_012912.1 PFAM: protein of unknown function DUF181; KEGG: eca:ECA2595 hypothetical protein; hypothetical protein 2681829 8120755 Dd1591_2343 Dickeya zeae Ech1591 hypothetical protein YP_003004664.1 2680066 D 561229 CDS YP_003004665.1 251789944 8120756 2682328..2683185 1 NC_012912.1 TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; KEGG: eca:ECA2596 formate transporter; formate/nitrite transporter 2683185 8120756 Dd1591_2344 Dickeya zeae Ech1591 formate/nitrite transporter YP_003004665.1 2682328 D 561229 CDS YP_003004666.1 251789945 8120757 2683242..2685524 1 NC_012912.1 KEGG: eca:ECA2597 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase 2685524 8120757 Dd1591_2345 Dickeya zeae Ech1591 formate acetyltransferase YP_003004666.1 2683242 D 561229 CDS YP_003004667.1 251789946 8120758 2685834..2686574 1 NC_012912.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 2686574 pflA 8120758 pflA Dickeya zeae Ech1591 pyruvate formate lyase-activating enzyme 1 YP_003004667.1 2685834 D 561229 CDS YP_003004668.1 251789947 8120759 2687164..2688105 1 NC_012912.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA2642 LysR family transcriptional regulator; LysR family transcriptional regulator 2688105 8120759 Dd1591_2347 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004668.1 2687164 D 561229 CDS YP_003004669.1 251789948 8120760 complement(2688115..2689263) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2643 MFS family transporter; putative MFS family transporter protein 2689263 8120760 Dd1591_2348 Dickeya zeae Ech1591 putative MFS family transporter protein YP_003004669.1 2688115 R 561229 CDS YP_003004670.1 251789949 8120761 complement(2689394..2690302) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pst:PSPTO_2447 LysR family transcriptional regulator; LysR family transcriptional regulator 2690302 8120761 Dd1591_2349 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004670.1 2689394 R 561229 CDS YP_003004671.1 251789950 8120762 2690406..2691281 1 NC_012912.1 PFAM: beta-lactamase domain protein; KEGG: bpm:BURPS1710b_3190 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 2691281 8120762 Dd1591_2350 Dickeya zeae Ech1591 beta-lactamase domain-containing protein YP_003004671.1 2690406 D 561229 CDS YP_003004672.1 251789951 8120763 2691569..2692213 1 NC_012912.1 KEGG: rpi:Rpic_1321 hypothetical protein; hypothetical protein 2692213 8120763 Dd1591_2351 Dickeya zeae Ech1591 hypothetical protein YP_003004672.1 2691569 D 561229 CDS YP_003004673.1 251789952 8120764 complement(2692402..2693016) 1 NC_012912.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: spe:Spro_1690 twin-argninine leader-binding protein DmsD; cytoplasmic chaperone TorD family protein 2693016 8120764 Dd1591_2352 Dickeya zeae Ech1591 cytoplasmic chaperone TorD family protein YP_003004673.1 2692402 R 561229 CDS YP_003004674.1 251789953 8120765 complement(2693303..2694598) 1 NC_012912.1 KEGG: eca:ECA2644 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 2694598 8120765 Dd1591_2353 Dickeya zeae Ech1591 seryl-tRNA synthetase YP_003004674.1 2693303 R 561229 CDS YP_003004675.1 251789954 8120767 2695133..2696467 1 NC_012912.1 PFAM: beta-lactamase domain protein; KEGG: rec:RHECIAT_CH0003332 putative alkyl sulfatase beta-lactamase family protein; beta-lactamase domain-containing protein 2696467 8120767 Dd1591_2355 Dickeya zeae Ech1591 beta-lactamase domain-containing protein YP_003004675.1 2695133 D 561229 CDS YP_003004676.1 251789955 8120768 2696596..2697804 1 NC_012912.1 PFAM: transposase mutator type; KEGG: yps:YPTB0777 putative transposase-like protein; transposase mutator type 2697804 8120768 Dd1591_2356 Dickeya zeae Ech1591 transposase mutator type YP_003004676.1 2696596 D 561229 CDS YP_003004677.1 251789956 8120769 complement(2698227..2699531) 1 NC_012912.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dac:Daci_5359 recombination factor protein RarA; recombination factor protein RarA 2699531 8120769 Dd1591_2357 Dickeya zeae Ech1591 recombination factor protein RarA YP_003004677.1 2698227 R 561229 CDS YP_003004678.1 251789957 8120770 complement(2699524..2699976) 1 NC_012912.1 KEGG: eca:ECA2645 recombination factor protein RarA; recombination factor protein RarA 2699976 8120770 Dd1591_2358 Dickeya zeae Ech1591 recombination factor protein RarA YP_003004678.1 2699524 R 561229 CDS YP_003004679.1 251789958 8120771 complement(2699984..2700598) 1 NC_012912.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 2700598 lolA 8120771 lolA Dickeya zeae Ech1591 outer-membrane lipoprotein carrier protein YP_003004679.1 2699984 R 561229 CDS YP_003004680.1 251789959 8120772 complement(2700777..2704385) 1 NC_012912.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: eca:ECA2647 cell division protein; cell division protein FtsK/SpoIIIE 2704385 8120772 Dd1591_2360 Dickeya zeae Ech1591 cell division protein FtsK/SpoIIIE YP_003004680.1 2700777 R 561229 CDS YP_003004681.1 251789960 8120773 complement(2704503..2704997) 1 NC_012912.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 2704997 8120773 Dd1591_2361 Dickeya zeae Ech1591 leucine-responsive transcriptional regulator YP_003004681.1 2704503 R 561229 CDS YP_003004682.1 251789961 8120774 2705499..2706455 1 NC_012912.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA2649 thioredoxin reductase; thioredoxin reductase 2706455 8120774 Dd1591_2362 Dickeya zeae Ech1591 thioredoxin reductase YP_003004682.1 2705499 D 561229 CDS YP_003004683.1 251789962 8120775 2706687..2708456 1 NC_012912.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding component 2708456 8120775 Dd1591_2363 Dickeya zeae Ech1591 cysteine/glutathione ABC transporter membrane/ATP-binding component YP_003004683.1 2706687 D 561229 CDS YP_003004684.1 251789963 8120776 2708476..2710197 1 NC_012912.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding component 2710197 8120776 Dd1591_2364 Dickeya zeae Ech1591 cysteine/glutathione ABC transporter membrane/ATP-binding component YP_003004684.1 2708476 D 561229 CDS YP_003004685.1 251789964 8120777 2710210..2710938 1 NC_012912.1 KEGG: spe:Spro_1676 leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 2710938 8120777 Dd1591_2365 Dickeya zeae Ech1591 leucyl/phenylalanyl-tRNA/protein transferase YP_003004685.1 2710210 D 561229 CDS YP_003004686.1 251789965 8120778 2711030..2711248 1 NC_012912.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2711248 infA 8120778 infA Dickeya zeae Ech1591 translation initiation factor IF-1 YP_003004686.1 2711030 D 561229 CDS YP_003004687.1 251789966 8120779 complement(2711538..2713814) 1 NC_012912.1 KEGG: eca:ECA2656 ATP-dependent Clp protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent Clp protease, ATP-binding subunit clpA 2713814 8120779 Dd1591_2367 Dickeya zeae Ech1591 ATP-dependent Clp protease, ATP-binding subunit clpA YP_003004687.1 2711538 R 561229 CDS YP_003004688.1 251789967 8120780 complement(2713843..2714163) 1 NC_012912.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: eca:ECA2657 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2714163 8120780 Dd1591_2368 Dickeya zeae Ech1591 ATP-dependent Clp protease adaptor protein ClpS YP_003004688.1 2713843 R 561229 CDS YP_003004689.1 251789968 8120781 2714487..2714708 1 NC_012912.1 KEGG: see:SNSL254_A0978 cold shock domain protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2714708 8120781 Dd1591_2369 Dickeya zeae Ech1591 cold-shock DNA-binding domain-containing protein YP_003004689.1 2714487 D 561229 CDS YP_003004690.1 251789969 8120782 complement(2714802..2716463) 1 NC_012912.1 KEGG: eca:ECA2660 hypothetical protein; hypothetical protein 2716463 8120782 Dd1591_2370 Dickeya zeae Ech1591 hypothetical protein YP_003004690.1 2714802 R 561229 CDS YP_003004691.1 251789970 8120783 2716711..2718363 1 NC_012912.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2718363 8120783 Dd1591_2371 Dickeya zeae Ech1591 hydroxylamine reductase YP_003004691.1 2716711 D 561229 CDS YP_003004692.1 251789971 8120784 2718425..2719432 1 NC_012912.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: eca:ECA2663 HCP oxidoreductase, NADH-dependent; HCP oxidoreductase, NADH-dependent 2719432 8120784 Dd1591_2372 Dickeya zeae Ech1591 HCP oxidoreductase, NADH-dependent YP_003004692.1 2718425 D 561229 CDS YP_003004693.1 251789972 8120785 2719873..2721342 1 NC_012912.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: eca:ECA2664 hypothetical protein; NAD-dependent epimerase/dehydratase 2721342 8120785 Dd1591_2373 Dickeya zeae Ech1591 NAD-dependent epimerase/dehydratase YP_003004693.1 2719873 D 561229 CDS YP_003004694.1 251789973 8120786 complement(2721445..2722314) 1 NC_012912.1 KEGG: eca:ECA2665 putative N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2722314 8120786 Dd1591_2374 Dickeya zeae Ech1591 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_003004694.1 2721445 R 561229 CDS YP_003004695.1 251789974 8120787 complement(2722311..2722637) 1 NC_012912.1 PFAM: protein of unknown function DUF74; KEGG: eca:ECA2666 hypothetical protein; hypothetical protein 2722637 8120787 Dd1591_2375 Dickeya zeae Ech1591 hypothetical protein YP_003004695.1 2722311 R 561229 CDS YP_003004696.1 251789975 8120788 2722969..2723718 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2667 arginine transporter ATP-binding subunit; ABC transporter 2723718 8120788 Dd1591_2376 Dickeya zeae Ech1591 ABC transporter YP_003004696.1 2722969 D 561229 CDS YP_003004697.1 251789976 8120789 2723736..2724467 1 NC_012912.1 KEGG: eca:ECA2668 arginine-binding periplasmic protein 1; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein 2724467 8120789 Dd1591_2377 Dickeya zeae Ech1591 cationic amino acid ABC transporter periplasmic binding protein YP_003004697.1 2723736 D 561229 CDS YP_003004698.1 251789977 8120790 2724482..2725198 1 NC_012912.1 with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ 2725198 8120790 Dd1591_2378 Dickeya zeae Ech1591 arginine transporter permease subunit ArtQ YP_003004698.1 2724482 D 561229 CDS YP_003004699.1 251789978 8120791 2725198..2725869 1 NC_012912.1 with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM 2725869 artM 8120791 artM Dickeya zeae Ech1591 arginine transporter permease subunit ArtM YP_003004699.1 2725198 D 561229 CDS YP_003004700.1 251789979 8120792 2726146..2726895 1 NC_012912.1 KEGG: eca:ECA2671 arginine-binding periplasmic protein 2; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein 2726895 8120792 Dd1591_2380 Dickeya zeae Ech1591 cationic amino acid ABC transporter periplasmic binding protein YP_003004700.1 2726146 D 561229 CDS YP_003004701.1 251789980 8120793 complement(2727015..2728145) 1 NC_012912.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 2728145 rumB 8120793 rumB Dickeya zeae Ech1591 23S rRNA methyluridine methyltransferase YP_003004701.1 2727015 R 561229 CDS YP_003004702.1 251789981 8120794 complement(2728210..2728647) 1 NC_012912.1 KEGG: eca:ECA2673 hypothetical protein; hypothetical protein 2728647 8120794 Dd1591_2382 Dickeya zeae Ech1591 hypothetical protein YP_003004702.1 2728210 R 561229 CDS YP_003004703.1 251789982 8120795 complement(2728773..2729618) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2674 putrescine ABC transporter membrane protein; putrescine ABC transporter subunit membrane protein 2729618 8120795 Dd1591_2383 Dickeya zeae Ech1591 putrescine ABC transporter subunit membrane protein YP_003004703.1 2728773 R 561229 CDS YP_003004704.1 251789983 8120796 complement(2729615..2730574) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2675 putrescine ABC transporter membrane protein; putrescine ABC transporter subunit membrane protein 2730574 8120796 Dd1591_2384 Dickeya zeae Ech1591 putrescine ABC transporter subunit membrane protein YP_003004704.1 2729615 R 561229 CDS YP_003004705.1 251789984 8120797 complement(2730589..2731716) 1 NC_012912.1 part of the PotFGHI ATP-dependent putrescine transporter; putrescine transporter ATP-binding subunit 2731716 potG 8120797 potG Dickeya zeae Ech1591 putrescine transporter ATP-binding subunit YP_003004705.1 2730589 R 561229 CDS YP_003004706.1 251789985 8120798 complement(2731835..2732944) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_2645 putrescine transporter subunit: periplasmic-binding component of ABC superfamily; putrescine ABC transporter subunit periplasmic-binding protein 2732944 8120798 Dd1591_2386 Dickeya zeae Ech1591 putrescine ABC transporter subunit periplasmic-binding protein YP_003004706.1 2731835 R 561229 CDS YP_003004707.1 251789986 8120799 complement(2733329..2733808) 1 NC_012912.1 KEGG: eca:ECA2678 hypothetical protein; hypothetical protein 2733808 8120799 Dd1591_2387 Dickeya zeae Ech1591 hypothetical protein YP_003004707.1 2733329 R 561229 CDS YP_003004708.1 251789987 8120800 complement(2733913..2734815) 1 NC_012912.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; KEGG: eca:ECA2679 ribosomal protein S6 modification protein; alpha-L-glutamate ligase, RimK family 2734815 8120800 Dd1591_2388 Dickeya zeae Ech1591 alpha-L-glutamate ligase, RimK family YP_003004708.1 2733913 R 561229 CDS YP_003004709.1 251789988 8120801 complement(2734828..2735550) 1 NC_012912.1 PFAM: nitroreductase; KEGG: esa:ESA_02486 nitroreductase A; nitroreductase 2735550 8120801 Dd1591_2389 Dickeya zeae Ech1591 nitroreductase YP_003004709.1 2734828 R 561229 CDS YP_003004710.1 251789989 8120802 2735867..2736124 1 NC_012912.1 TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin; KEGG: spe:Spro_1641 glutaredoxin 1; glutaredoxin, GrxA family 2736124 8120802 Dd1591_2390 Dickeya zeae Ech1591 glutaredoxin, GrxA family YP_003004710.1 2735867 D 561229 CDS YP_003004711.1 251789990 8120803 complement(2736266..2736634) 1 NC_012912.1 KEGG: eca:ECA2682 hypothetical protein; hypothetical protein 2736634 8120803 Dd1591_2391 Dickeya zeae Ech1591 hypothetical protein YP_003004711.1 2736266 R 561229 CDS YP_003004712.1 251789991 8120804 complement(2736693..2736896) 1 NC_012912.1 hypothetical protein 2736896 8120804 Dd1591_2392 Dickeya zeae Ech1591 hypothetical protein YP_003004712.1 2736693 R 561229 CDS YP_003004713.1 251789992 8120805 2736981..2738669 1 NC_012912.1 TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein; KEGG: eca:ECA2683 hypothetical protein; hypothetical protein 2738669 8120805 Dd1591_2393 Dickeya zeae Ech1591 hypothetical protein YP_003004713.1 2736981 D 561229 CDS YP_003004714.1 251789993 8120806 2739157..2739927 1 NC_012912.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eca:ECA2685 DNA-binding transcriptional repressor DeoR; DNA-binding transcriptional repressor DeoR 2739927 8120806 Dd1591_2394 Dickeya zeae Ech1591 DNA-binding transcriptional repressor DeoR YP_003004714.1 2739157 D 561229 CDS YP_003004715.1 251789994 8120807 complement(2739983..2741191) 1 NC_012912.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: eca:ECA2686 penicillin-binding protein 6; beta-lactamase 2741191 8120807 Dd1591_2395 Dickeya zeae Ech1591 beta-lactamase YP_003004715.1 2739983 R 561229 CDS YP_003004716.1 251789995 8120808 2741712..2742530 1 NC_012912.1 PFAM: alpha/beta hydrolase fold; KEGG: bpd:BURPS668_A1921 rhamnosyltransferase 1 subunit A; alpha/beta hydrolase fold protein 2742530 8120808 Dd1591_2396 Dickeya zeae Ech1591 alpha/beta hydrolase fold protein YP_003004716.1 2741712 D 561229 CDS YP_003004717.1 251789996 8120809 complement(2742610..2743272) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2687 ABC transporter integral membrane protein; binding-protein-dependent transport systems inner membrane component 2743272 8120809 Dd1591_2397 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004717.1 2742610 R 561229 CDS YP_003004718.1 251789997 8120810 complement(2743265..2744281) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2688 ABC transporter ATP-binding protein; ABC transporter 2744281 8120810 Dd1591_2398 Dickeya zeae Ech1591 ABC transporter YP_003004718.1 2743265 R 561229 CDS YP_003004719.1 251789998 8120811 complement(2744427..2745272) 1 NC_012912.1 PFAM: NLPA lipoprotein; KEGG: eca:ECA2689 putative lipoprotein; NLPA lipoprotein 2745272 8120811 Dd1591_2399 Dickeya zeae Ech1591 NLPA lipoprotein YP_003004719.1 2744427 R 561229 CDS YP_003004720.1 251789999 8120812 2745510..2746127 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: eca:ECA2690 putative glutathione S-transferase; Glutathione S-transferase domain-containing protein 2746127 8120812 Dd1591_2400 Dickeya zeae Ech1591 Glutathione S-transferase domain-containing protein YP_003004720.1 2745510 D 561229 CDS YP_003004721.1 251790000 8120813 complement(2746203..2747327) 1 NC_012912.1 PFAM: glucose sorbosone dehydrogenase; KEGG: eca:ECA2691 hypothetical protein; glucose sorbosone dehydrogenase 2747327 8120813 Dd1591_2401 Dickeya zeae Ech1591 glucose sorbosone dehydrogenase YP_003004721.1 2746203 R 561229 CDS YP_003004722.1 251790001 8120814 2747580..2748983 1 NC_012912.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 2748983 rimO 8120814 rimO Dickeya zeae Ech1591 ribosomal protein S12 methylthiotransferase YP_003004722.1 2747580 D 561229 CDS YP_003004723.1 251790002 8120815 2749170..2749925 1 NC_012912.1 PFAM: protein of unknown function DUF218; KEGG: eca:ECA2709 hypothetical protein; hypothetical protein 2749925 8120815 Dd1591_2403 Dickeya zeae Ech1591 hypothetical protein YP_003004723.1 2749170 D 561229 CDS YP_003004724.1 251790003 8120816 complement(2749926..2751074) 1 NC_012912.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: eca:ECA2710 hypothetical protein; hypothetical protein 2751074 8120816 Dd1591_2404 Dickeya zeae Ech1591 hypothetical protein YP_003004724.1 2749926 R 561229 CDS YP_003004725.1 251790004 8120817 complement(2751223..2751891) 1 NC_012912.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2751891 folE 8120817 folE Dickeya zeae Ech1591 GTP cyclohydrolase I YP_003004725.1 2751223 R 561229 CDS YP_003004726.1 251790005 8120818 complement(2752081..2753760) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA1509 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2753760 8120818 Dd1591_2406 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004726.1 2752081 R 561229 CDS YP_003004727.1 251790006 8120819 complement(2754119..2755786) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA2712 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2755786 8120819 Dd1591_2407 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004727.1 2754119 R 561229 CDS YP_003004728.1 251790007 8120820 complement(2756316..2757989) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA2712 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2757989 8120820 Dd1591_2408 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004728.1 2756316 R 561229 CDS YP_003004729.1 251790008 8120821 complement(2758686..2760305) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA2712 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2760305 8120821 Dd1591_2409 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003004729.1 2758686 R 561229 CDS YP_003004730.1 251790009 8120822 2761097..2761960 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2713 LysR family transcriptional regulator; LysR family transcriptional regulator 2761960 8120822 Dd1591_2410 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004730.1 2761097 D 561229 CDS YP_003004731.1 251790010 8120823 2762049..2763170 1 NC_012912.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: spe:Spro_1557 S-(hydroxymethyl)glutathione dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2763170 8120823 Dd1591_2411 Dickeya zeae Ech1591 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_003004731.1 2762049 D 561229 CDS YP_003004732.1 251790011 8120824 2763191..2764036 1 NC_012912.1 KEGG: spe:Spro_1556 S-formylglutathione hydrolase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 2764036 8120824 Dd1591_2412 Dickeya zeae Ech1591 S-formylglutathione hydrolase YP_003004732.1 2763191 D 561229 CDS YP_003004733.1 251790012 8120825 2764333..2764545 1 NC_012912.1 KEGG: eca:ECA2717 hypothetical protein; hypothetical protein 2764545 8120825 Dd1591_2413 Dickeya zeae Ech1591 hypothetical protein YP_003004733.1 2764333 D 561229 CDS YP_003004734.1 251790013 8120826 complement(2764598..2765683) 1 NC_012912.1 member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 2765683 8120826 Dd1591_2414 Dickeya zeae Ech1591 hypothetical protein YP_003004734.1 2764598 R 561229 CDS YP_003004735.1 251790014 8120827 2765946..2767457 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2719 ABC transporter, ATP-binding protein; ABC transporter 2767457 8120827 Dd1591_2415 Dickeya zeae Ech1591 ABC transporter YP_003004735.1 2765946 D 561229 CDS YP_003004736.1 251790015 8120828 2767454..2768461 1 NC_012912.1 PFAM: inner-membrane translocator; KEGG: eca:ECA2720 ABC transporter, permease protein; inner-membrane translocator 2768461 8120828 Dd1591_2416 Dickeya zeae Ech1591 inner-membrane translocator YP_003004736.1 2767454 D 561229 CDS YP_003004737.1 251790016 8120829 2768624..2769811 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3194 sugar efflux transporter; sugar efflux transporter 2769811 8120829 Dd1591_2417 Dickeya zeae Ech1591 sugar efflux transporter YP_003004737.1 2768624 D 561229 CDS YP_003004738.1 251790017 8120830 complement(2769893..2771365) 1 NC_012912.1 PFAM: amino acid permease-associated region; KEGG: eca:ECA2723 lysine transporter; lysine transporter 2771365 8120830 Dd1591_2418 Dickeya zeae Ech1591 lysine transporter YP_003004738.1 2769893 R 561229 CDS YP_003004739.1 251790018 8120831 complement(2771529..2772407) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2724 putative DNA-binding transcriptional regulator; putative DNA-binding transcriptional regulator 2772407 8120831 Dd1591_2419 Dickeya zeae Ech1591 putative DNA-binding transcriptional regulator YP_003004739.1 2771529 R 561229 CDS YP_003004740.1 251790019 8120832 2772514..2773599 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA2725 hypothetical protein; hypothetical protein 2773599 8120832 Dd1591_2420 Dickeya zeae Ech1591 hypothetical protein YP_003004740.1 2772514 D 561229 CDS YP_003004741.1 251790020 8120833 2773669..2774520 1 NC_012912.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 2774520 8120833 Dd1591_2421 Dickeya zeae Ech1591 endonuclease IV YP_003004741.1 2773669 D 561229 CDS YP_003004742.1 251790021 8120062 complement(2774566..2775276) 1 NC_012912.1 KEGG: she:Shewmr4_1705 hypothetical protein; hypothetical protein 2775276 8120062 Dd1591_2422 Dickeya zeae Ech1591 hypothetical protein YP_003004742.1 2774566 R 561229 CDS YP_003004743.1 251790022 8120063 complement(2775386..2776711) 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 2776711 8120063 Dd1591_2423 Dickeya zeae Ech1591 transposase IS4 family protein YP_003004743.1 2775386 R 561229 CDS YP_003004744.1 251790023 8120064 complement(2776834..2778525) 1 NC_012912.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunits IIBC 2778525 8120064 Dd1591_2424 Dickeya zeae Ech1591 PTS system fructose-specific transporter subunits IIBC YP_003004744.1 2776834 R 561229 CDS YP_003004745.1 251790024 8120065 complement(2778542..2779480) 1 NC_012912.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 2779480 fruK 8120065 fruK Dickeya zeae Ech1591 1-phosphofructokinase YP_003004745.1 2778542 R 561229 CDS YP_003004746.1 251790025 8120066 complement(2779477..2780616) 1 NC_012912.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 2780616 8120066 Dd1591_2426 Dickeya zeae Ech1591 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein YP_003004746.1 2779477 R 561229 CDS YP_003004747.1 251790026 8120067 2780952..2782133 1 NC_012912.1 TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2730 sugar efflux transporter; sugar efflux transporter 2782133 8120067 Dd1591_2427 Dickeya zeae Ech1591 sugar efflux transporter YP_003004747.1 2780952 D 561229 CDS YP_003004748.1 251790027 8120068 complement(2782139..2782393) 1 NC_012912.1 PFAM: protein of unknown function UPF0153; KEGG: eca:ECA2731 hypothetical protein; hypothetical protein 2782393 8120068 Dd1591_2428 Dickeya zeae Ech1591 hypothetical protein YP_003004748.1 2782139 R 561229 CDS YP_003004749.1 251790028 8120069 2782630..2783202 1 NC_012912.1 Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P 2783202 8120069 Dd1591_2429 Dickeya zeae Ech1591 elongation factor P YP_003004749.1 2782630 D 561229 CDS YP_003004750.1 251790029 8120070 2783283..2784260 1 NC_012912.1 PFAM: cobalamin synthesis protein P47K; KEGG: eca:ECA2733 hypothetical protein; cobalamin synthesis protein P47K 2784260 8120070 Dd1591_2430 Dickeya zeae Ech1591 cobalamin synthesis protein P47K YP_003004750.1 2783283 D 561229 CDS YP_003004751.1 251790030 8120071 2784689..2785264 1 NC_012912.1 by similarity, Spr seems to have peptidase activity; involved in thermoresistance; putative outer membrane lipoprotein 2785264 spr 8120071 spr Dickeya zeae Ech1591 putative outer membrane lipoprotein YP_003004751.1 2784689 D 561229 CDS YP_003004752.1 251790031 8120072 2785518..2787329 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2736 putative ABC transporter, periplasmic binding protein; extracellular solute-binding protein family 5 2787329 8120072 Dd1591_2432 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004752.1 2785518 D 561229 CDS YP_003004753.1 251790032 8120073 2787339..2788436 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2737 putative binding-protein-dependent transporter; binding-protein-dependent transport systems inner membrane component 2788436 8120073 Dd1591_2433 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004753.1 2787339 D 561229 CDS YP_003004754.1 251790033 8120074 2788433..2789458 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2738 ABC transporter permease; binding-protein-dependent transport systems inner membrane component 2789458 8120074 Dd1591_2434 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004754.1 2788433 D 561229 CDS YP_003004755.1 251790034 8120075 2789460..2791052 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2739 putative ABC-transporter, ATP-binding protein; ABC transporter 2791052 8120075 Dd1591_2435 Dickeya zeae Ech1591 ABC transporter YP_003004755.1 2789460 D 561229 CDS YP_003004756.1 251790035 8120076 complement(2791141..2791485) 1 NC_012912.1 KEGG: eca:ECA2740 hypothetical protein; hypothetical protein 2791485 8120076 Dd1591_2436 Dickeya zeae Ech1591 hypothetical protein YP_003004756.1 2791141 R 561229 CDS YP_003004757.1 251790036 8120077 complement(2791842..2793023) 1 NC_012912.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system 2793023 8120077 Dd1591_2437 Dickeya zeae Ech1591 bicyclomycin/multidrug efflux system YP_003004757.1 2791842 R 561229 CDS YP_003004758.1 251790037 8120078 complement(2793122..2793820) 1 NC_012912.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 2793820 8120078 Dd1591_2438 Dickeya zeae Ech1591 16S rRNA pseudouridylate synthase A YP_003004758.1 2793122 R 561229 CDS YP_003004759.1 251790038 8120079 2794089..2794328 1 NC_012912.1 KEGG: cko:CKO_01041 hypothetical protein; hypothetical protein 2794328 8120079 Dd1591_2439 Dickeya zeae Ech1591 hypothetical protein YP_003004759.1 2794089 D 561229 CDS YP_003004760.1 251790039 8120080 2794328..2796103 1 NC_012912.1 PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: eca:ECA2744 putative helicase; type III restriction protein res subunit 2796103 8120080 Dd1591_2440 Dickeya zeae Ech1591 type III restriction protein res subunit YP_003004760.1 2794328 D 561229 CDS YP_003004761.1 251790040 8120081 2796385..2796672 1 NC_012912.1 PFAM: ribosomal protein L25; KEGG: eca:ECA2745 50S ribosomal protein L25; 50S ribosomal protein L25 2796672 8120081 Dd1591_2441 Dickeya zeae Ech1591 50S ribosomal protein L25 YP_003004761.1 2796385 D 561229 CDS YP_003004762.1 251790041 8120082 complement(2796860..2798077) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2430 hypothetical protein; major facilitator superfamily protein 2798077 8120082 Dd1591_2442 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003004762.1 2796860 R 561229 CDS YP_003004763.1 251790042 8120083 complement(2798274..2799011) 1 NC_012912.1 PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: cko:CKO_00419 hypothetical protein; LytTR family two component transcriptional regulator 2799011 8120083 Dd1591_2443 Dickeya zeae Ech1591 LytTR family two component transcriptional regulator YP_003004763.1 2798274 R 561229 CDS YP_003004764.1 251790043 8120084 complement(2799037..2800737) 1 NC_012912.1 KEGG: eta:ETA_11160 putative sensor protein; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase, LytS 2800737 8120084 Dd1591_2444 Dickeya zeae Ech1591 signal transduction histidine kinase, LytS YP_003004764.1 2799037 R 561229 CDS YP_003004765.1 251790044 8120085 complement(2800884..2801894) 1 NC_012912.1 PFAM: 37kDa nucleoid-associated protein; KEGG: eca:ECA2747 nucleoid-associated protein NdpA; nucleoid-associated protein NdpA 2801894 8120085 Dd1591_2445 Dickeya zeae Ech1591 nucleoid-associated protein NdpA YP_003004765.1 2800884 R 561229 CDS YP_003004766.1 251790045 8120086 2802057..2802287 1 NC_012912.1 PFAM: protein of unknown function DUF1414; KEGG: spe:Spro_3256 hypothetical protein; hypothetical protein 2802287 8120086 Dd1591_2446 Dickeya zeae Ech1591 hypothetical protein YP_003004766.1 2802057 D 561229 CDS YP_003004767.1 251790046 8120087 2802301..2804073 1 NC_012912.1 PFAM: sulfatase; KEGG: eca:ECA2749 putative sulphatase; sulfatase 2804073 8120087 Dd1591_2447 Dickeya zeae Ech1591 sulfatase YP_003004767.1 2802301 D 561229 CDS YP_003004768.1 251790047 8120090 complement(2805841..2806743) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psb:Psyr_4923 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 2806743 8120090 Dd1591_2449 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004768.1 2805841 R 561229 CDS YP_003004769.1 251790048 8120091 2806881..2807627 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ppf:Pput_1853 short chain dehydrogenase; short chain dehydrogenase 2807627 8120091 Dd1591_2450 Dickeya zeae Ech1591 short chain dehydrogenase YP_003004769.1 2806881 D 561229 CDS YP_003004770.1 251790049 8120092 2807707..2808381 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: ara:Arad_7543 glutathione S-transferase protein; Glutathione S-transferase domain-containing protein 2808381 8120092 Dd1591_2451 Dickeya zeae Ech1591 Glutathione S-transferase domain-containing protein YP_003004770.1 2807707 D 561229 CDS YP_003004771.1 251790050 8120093 2808631..2808876 1 NC_012912.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: eca:ECA2757 hypothetical protein; CopG family transcriptional regulator 2808876 8120093 Dd1591_2452 Dickeya zeae Ech1591 CopG family transcriptional regulator YP_003004771.1 2808631 D 561229 CDS YP_003004772.1 251790051 8120094 2808866..2809150 1 NC_012912.1 PFAM: plasmid stabilization system; KEGG: eca:ECA2758 hypothetical protein; plasmid stabilization system protein 2809150 8120094 Dd1591_2453 Dickeya zeae Ech1591 plasmid stabilization system protein YP_003004772.1 2808866 D 561229 CDS YP_003004773.1 251790052 8120095 2809353..2809835 1 NC_012912.1 PFAM: glutathione peroxidase; KEGG: kpn:KPN_01190 putative glutathione peroxidase; Peroxiredoxin 2809835 8120095 Dd1591_2454 Dickeya zeae Ech1591 Peroxiredoxin YP_003004773.1 2809353 D 561229 CDS YP_003004774.1 251790053 8120096 complement(2809977..2810324) 1 NC_012912.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: efe:EFER_2615 hypothetical protein; hypothetical protein 2810324 8120096 Dd1591_2455 Dickeya zeae Ech1591 hypothetical protein YP_003004774.1 2809977 R 561229 CDS YP_003004775.1 251790054 8120097 2810659..2810781 1 NC_012912.1 hypothetical protein 2810781 8120097 Dd1591_2456 Dickeya zeae Ech1591 hypothetical protein YP_003004775.1 2810659 D 561229 CDS YP_003004776.1 251790055 8120098 2811045..2811245 1 NC_012912.1 hypothetical protein 2811245 8120098 Dd1591_2457 Dickeya zeae Ech1591 hypothetical protein YP_003004776.1 2811045 D 561229 CDS YP_003004777.1 251790056 8120099 complement(2811351..2812106) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: bcm:Bcenmc03_2495 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2812106 8120099 Dd1591_2458 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003004777.1 2811351 R 561229 CDS YP_003004778.1 251790057 8120100 2812223..2812819 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_2496 TetR family transcriptional regulator; TetR family transcriptional regulator 2812819 8120100 Dd1591_2459 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003004778.1 2812223 D 561229 CDS YP_003004779.1 251790058 8120101 2812831..2812929 1 NC_012912.1 hypothetical protein 2812929 8120101 Dd1591_2460 Dickeya zeae Ech1591 hypothetical protein YP_003004779.1 2812831 D 561229 CDS YP_003004780.1 251790059 8120102 complement(2813193..2813624) 1 NC_012912.1 KEGG: ecr:ECIAI1_3650 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 2813624 8120102 Dd1591_2461 Dickeya zeae Ech1591 arsenate reductase YP_003004780.1 2813193 R 561229 CDS YP_003004781.1 251790060 8120103 complement(2813715..2814998) 1 NC_012912.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: hypothetical protein LOC754318; arsenical pump membrane protein 2814998 8120103 Dd1591_2462 Dickeya zeae Ech1591 arsenical pump membrane protein YP_003004781.1 2813715 R 561229 CDS YP_003004782.1 251790061 8120104 complement(2815051..2815383) 1 NC_012912.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: yen:YE3472 DNA-binding transcriptional repressor ArsR; ArsR family transcriptional regulator 2815383 8120104 Dd1591_2463 Dickeya zeae Ech1591 ArsR family transcriptional regulator YP_003004782.1 2815051 R 561229 CDS YP_003004783.1 251790062 8120105 2816290..2816640 1 NC_012912.1 PFAM: protein of unknown function DUF1304; KEGG: kpn:KPN_01507 hypothetical protein; hypothetical protein 2816640 8120105 Dd1591_2464 Dickeya zeae Ech1591 hypothetical protein YP_003004783.1 2816290 D 561229 CDS YP_003004784.1 251790063 8120106 2816728..2816979 1 NC_012912.1 hypothetical protein 2816979 8120106 Dd1591_2465 Dickeya zeae Ech1591 hypothetical protein YP_003004784.1 2816728 D 561229 CDS YP_003004785.1 251790064 8120107 2817013..2817117 1 NC_012912.1 hypothetical protein 2817117 8120107 Dd1591_2466 Dickeya zeae Ech1591 hypothetical protein YP_003004785.1 2817013 D 561229 CDS YP_003004786.1 251790065 8120108 2817272..2817805 1 NC_012912.1 KEGG: hin:HI1492 hypothetical protein; hypothetical protein 2817805 8120108 Dd1591_2467 Dickeya zeae Ech1591 hypothetical protein YP_003004786.1 2817272 D 561229 CDS YP_003004787.1 251790066 8120109 complement(2817879..2818220) 1 NC_012912.1 PFAM: GlpM family protein; KEGG: eca:ECA0108 hypothetical protein; GlpM family protein 2818220 8120109 Dd1591_2468 Dickeya zeae Ech1591 GlpM family protein YP_003004787.1 2817879 R 561229 CDS YP_003004788.1 251790067 8120110 2818504..2819808 1 NC_012912.1 outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; YbhC localizes to the cellular poles; member of pectinesterase family; putative pectinesterase 2819808 8120110 Dd1591_2469 Dickeya zeae Ech1591 putative pectinesterase YP_003004788.1 2818504 D 561229 CDS YP_003004789.1 251790068 8120111 complement(2819878..2821143) 1 NC_012912.1 PFAM: secretion protein HlyD family protein; KEGG: plu:plu2645 hypothetical protein; secretion protein HlyD family protein 2821143 8120111 Dd1591_2470 Dickeya zeae Ech1591 secretion protein HlyD family protein YP_003004789.1 2819878 R 561229 CDS YP_003004790.1 251790069 8120112 complement(2821133..2822578) 1 NC_012912.1 PFAM: outer membrane efflux protein; KEGG: plu:plu2646 hypothetical protein; outer membrane efflux protein 2822578 8120112 Dd1591_2471 Dickeya zeae Ech1591 outer membrane efflux protein YP_003004790.1 2821133 R 561229 CDS YP_003004791.1 251790070 8120113 complement(2822568..2823749) 1 NC_012912.1 PFAM: protein of unknown function DUF214; KEGG: plu:plu2647 hypothetical protein; hypothetical protein 2823749 8120113 Dd1591_2472 Dickeya zeae Ech1591 hypothetical protein YP_003004791.1 2822568 R 561229 CDS YP_003004792.1 251790071 8120114 complement(2823757..2824500) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2947 ABC transporter, ATP-binding protein; ABC transporter 2824500 8120114 Dd1591_2473 Dickeya zeae Ech1591 ABC transporter YP_003004792.1 2823757 R 561229 CDS YP_003004793.1 251790072 8120115 complement(2825123..2825491) 1 NC_012912.1 hypothetical protein 2825491 8120115 Dd1591_2474 Dickeya zeae Ech1591 hypothetical protein YP_003004793.1 2825123 R 561229 CDS YP_003004794.1 251790073 8120116 complement(2825896..2826384) 1 NC_012912.1 PFAM: heat shock protein Hsp20; KEGG: set:SEN1800 putative heat shock protein; heat shock protein Hsp20 2826384 8120116 Dd1591_2475 Dickeya zeae Ech1591 heat shock protein Hsp20 YP_003004794.1 2825896 R 561229 CDS YP_003004795.1 251790074 8120117 complement(2826553..2827848) 1 NC_012912.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bmj:BMULJ_02890 hypothetical protein; cytosine/purines uracil thiamine allantoin permease 2827848 8120117 Dd1591_2476 Dickeya zeae Ech1591 cytosine/purines uracil thiamine allantoin permease YP_003004795.1 2826553 R 561229 CDS YP_003004796.1 251790075 8120118 complement(2828047..2829054) 1 NC_012912.1 KEGG: pap:PSPA7_0599 biotin-dependent carboxylase domain-containing protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase related protein 2829054 8120118 Dd1591_2477 Dickeya zeae Ech1591 urea amidolyase related protein YP_003004796.1 2828047 R 561229 CDS YP_003004797.1 251790076 8120119 complement(2829041..2829925) 1 NC_012912.1 PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: ppg:PputGB1_2861 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 2829925 8120119 Dd1591_2478 Dickeya zeae Ech1591 allophanate hydrolase subunit 1 YP_003004797.1 2829041 R 561229 CDS YP_003004798.1 251790077 8120120 complement(2829927..2831312) 1 NC_012912.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2831312 8120120 Dd1591_2479 Dickeya zeae Ech1591 acetyl-CoA carboxylase biotin carboxylase subunit YP_003004798.1 2829927 R 561229 CDS YP_003004799.1 251790078 8120121 complement(2831366..2831614) 1 NC_012912.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_4578 hypothetical protein; biotin/lipoyl attachment domain-containing protein 2831614 8120121 Dd1591_2480 Dickeya zeae Ech1591 biotin/lipoyl attachment domain-containing protein YP_003004799.1 2831366 R 561229 CDS YP_003004800.1 251790079 8120122 complement(2831644..2832426) 1 NC_012912.1 PFAM: LamB/YcsF family protein; KEGG: pae:PA0492 hypothetical protein; hypothetical protein 2832426 8120122 Dd1591_2481 Dickeya zeae Ech1591 hypothetical protein YP_003004800.1 2831644 R 561229 CDS YP_003004801.1 251790080 8120123 2832555..2833469 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psp:PSPPH_2444 LysR family transcriptional regulator; LysR family transcriptional regulator 2833469 8120123 Dd1591_2482 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004801.1 2832555 D 561229 CDS YP_003004802.1 251790081 8120124 complement(2833466..2834647) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2763 transport protein; major facilitator superfamily protein 2834647 8120124 Dd1591_2483 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003004802.1 2833466 R 561229 CDS YP_003004803.1 251790082 8120125 2834745..2835236 1 NC_012912.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmn:BMA10247_0906 MarR family transcriptional regulator; MarR family transcriptional regulator 2835236 8120125 Dd1591_2484 Dickeya zeae Ech1591 MarR family transcriptional regulator YP_003004803.1 2834745 D 561229 CDS YP_003004804.1 251790083 8120126 complement(2835353..2835865) 1 NC_012912.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X 2835865 ompX 8120126 ompX Dickeya zeae Ech1591 outer membrane protein X YP_003004804.1 2835353 R 561229 CDS YP_003004805.1 251790084 8120127 2836238..2837119 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2765 threonine and homoserine efflux system; hypothetical protein 2837119 8120127 Dd1591_2486 Dickeya zeae Ech1591 hypothetical protein YP_003004805.1 2836238 D 561229 CDS YP_003004806.1 251790085 8120128 2837319..2837822 1 NC_012912.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 2837822 8120128 Dd1591_2487 Dickeya zeae Ech1591 DNA starvation/stationary phase protection protein Dps YP_003004806.1 2837319 D 561229 CDS YP_003004807.1 251790086 8120129 2838326..2839072 1 NC_012912.1 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 2839072 glnH 8120129 glnH Dickeya zeae Ech1591 glutamine ABC transporter periplasmic protein YP_003004807.1 2838326 D 561229 CDS YP_003004808.1 251790087 8120130 2839176..2839835 1 NC_012912.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease protein 2839835 glnP 8120130 glnP Dickeya zeae Ech1591 glutamine ABC transporter permease protein YP_003004808.1 2839176 D 561229 CDS YP_003004809.1 251790088 8120131 2839832..2840554 1 NC_012912.1 similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 2840554 glnQ 8120131 glnQ Dickeya zeae Ech1591 glutamine ABC transporter ATP-binding protein YP_003004809.1 2839832 D 561229 CDS YP_003004810.1 251790089 8120132 2840812..2842512 1 NC_012912.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: afw:Anae109_2327 cell surface receptor IPT/TIG domain-containing protein; Fibronectin type III domain-containing protein 2842512 8120132 Dd1591_2491 Dickeya zeae Ech1591 Fibronectin type III domain-containing protein YP_003004810.1 2840812 D 561229 CDS YP_003004811.1 251790090 8120133 complement(2842650..2843927) 1 NC_012912.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: eta:ETA_04650 putative phosphatase; phosphoesterase PA-phosphatase related 2843927 8120133 Dd1591_2492 Dickeya zeae Ech1591 phosphoesterase PA-phosphatase related YP_003004811.1 2842650 R 561229 CDS YP_003004812.1 251790091 8120134 complement(2844186..2846051) 1 NC_012912.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: eca:ECA2771 putative peptidase; peptidase M3A and M3B thimet/oligopeptidase F 2846051 8120134 Dd1591_2493 Dickeya zeae Ech1591 peptidase M3A and M3B thimet/oligopeptidase F YP_003004812.1 2844186 R 561229 CDS YP_003004813.1 251790092 8120135 complement(2846082..2847050) 1 NC_012912.1 PFAM: Glycosyl transferase, family 3-like; KEGG: eca:ECA2772 hypothetical protein; glycosyl transferase family protein 2847050 8120135 Dd1591_2494 Dickeya zeae Ech1591 glycosyl transferase family protein YP_003004813.1 2846082 R 561229 CDS YP_003004814.1 251790093 8120136 complement(2847258..2849363) 1 NC_012912.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 2849363 dinG 8120136 dinG Dickeya zeae Ech1591 ATP-dependent DNA helicase DinG YP_003004814.1 2847258 R 561229 CDS YP_003004815.1 251790094 8120137 2849612..2849719 1 NC_012912.1 KEGG: ecz:ECS88_2271 hypothetical protein; hypothetical protein 2849719 8120137 Dd1591_2496 Dickeya zeae Ech1591 hypothetical protein YP_003004815.1 2849612 D 561229 CDS YP_003004816.1 251790095 8120138 complement(2849836..2852145) 1 NC_012912.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: eca:ECA2790 periplasmic beta-glucosidase; glycoside hydrolase family 3 domain-containing protein 2852145 8120138 Dd1591_2497 Dickeya zeae Ech1591 glycoside hydrolase family 3 domain-containing protein YP_003004816.1 2849836 R 561229 CDS YP_003004817.1 251790096 8120139 complement(2852355..2853695) 1 NC_012912.1 PFAM: aminotransferase class-III; KEGG: bpy:Bphyt_0048 aminotransferase class-III; aminotransferase class-III 2853695 8120139 Dd1591_2498 Dickeya zeae Ech1591 aminotransferase class-III YP_003004817.1 2852355 R 561229 CDS YP_003004818.1 251790097 8120140 2854113..2854889 1 NC_012912.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: eta:ETA_34310 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 2854889 8120140 Dd1591_2499 Dickeya zeae Ech1591 DeoR family transcriptional regulator YP_003004818.1 2854113 D 561229 CDS YP_003004819.1 251790098 8120141 2855020..2855706 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: eca:ECA2791 putative glutathione S-transferase; Glutathione S-transferase domain-containing protein 2855706 8120141 Dd1591_2500 Dickeya zeae Ech1591 Glutathione S-transferase domain-containing protein YP_003004819.1 2855020 D 561229 CDS YP_003004820.1 251790099 8120354 complement(2855725..2856684) 1 NC_012912.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 2856684 pbpG 8120354 pbpG Dickeya zeae Ech1591 D-alanyl-D-alanine endopeptidase YP_003004820.1 2855725 R 561229 CDS YP_003004821.1 251790100 8120355 complement(2856927..2857466) 1 NC_012912.1 TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: eca:ECA2795 adenylate cyclase; adenylyl cyclase CyaB 2857466 8120355 Dd1591_2502 Dickeya zeae Ech1591 adenylyl cyclase CyaB YP_003004821.1 2856927 R 561229 CDS YP_003004822.1 251790101 8120356 complement(2858240..2858647) 1 NC_012912.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pae:PA1129 fosfomycin resistance protein; Glutathione transferase 2858647 8120356 Dd1591_2503 Dickeya zeae Ech1591 Glutathione transferase YP_003004822.1 2858240 R 561229 CDS YP_003004823.1 251790102 8120357 complement(2858753..2859688) 1 NC_012912.1 PFAM: dihydrouridine synthase DuS; KEGG: kpe:KPK_1587 tRNA-dihydrouridine synthase C; tRNA-dihydrouridine synthase C 2859688 8120357 Dd1591_2504 Dickeya zeae Ech1591 tRNA-dihydrouridine synthase C YP_003004823.1 2858753 R 561229 CDS YP_003004824.1 251790103 8120358 complement(2859838..2861433) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2801 periplasmic dipeptide transport protein; extracellular solute-binding protein family 5 2861433 8120358 Dd1591_2505 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004824.1 2859838 R 561229 CDS YP_003004825.1 251790104 8120359 2861761..2863002 1 NC_012912.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2863002 8120359 Dd1591_2506 Dickeya zeae Ech1591 peptidase T YP_003004825.1 2861761 D 561229 CDS YP_003004826.1 251790105 8120360 complement(2862994..2863869) 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spe:Spro_2337 AraC family transcriptional regulator; AraC family transcriptional regulator 2863869 8120360 Dd1591_2507 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003004826.1 2862994 R 561229 CDS YP_003004827.1 251790106 8120361 complement(2864022..2864984) 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: swi:Swit_0727 hypothetical protein; hypothetical protein 2864984 8120361 Dd1591_2508 Dickeya zeae Ech1591 hypothetical protein YP_003004827.1 2864022 R 561229 CDS YP_003004828.1 251790107 8120362 2865356..2866252 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: kpn:KPN_01938 putative transmembrane protein; hypothetical protein 2866252 8120362 Dd1591_2509 Dickeya zeae Ech1591 hypothetical protein YP_003004828.1 2865356 D 561229 CDS YP_003004829.1 251790108 8120363 complement(2866257..2867624) 1 NC_012912.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: eca:ECA2805 ATP-dependent RNA helicase RhlE; DEAD/DEAH box helicase domain-containing protein 2867624 8120363 Dd1591_2510 Dickeya zeae Ech1591 DEAD/DEAH box helicase domain-containing protein YP_003004829.1 2866257 R 561229 CDS YP_003004830.1 251790109 8120364 2868074..2869078 1 NC_012912.1 PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_1329 hypothetical protein; hypothetical protein 2869078 8120364 Dd1591_2511 Dickeya zeae Ech1591 hypothetical protein YP_003004830.1 2868074 D 561229 CDS YP_003004831.1 251790110 8120365 2869068..2870819 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_1328 ABC transporter-related protein; ABC transporter 2870819 8120365 Dd1591_2512 Dickeya zeae Ech1591 ABC transporter YP_003004831.1 2869068 D 561229 CDS YP_003004832.1 251790111 8120366 2870803..2871948 1 NC_012912.1 PFAM: ABC-2 type transporter; KEGG: yen:YE2893 hypothetical protein; ABC transporter 2871948 8120366 Dd1591_2513 Dickeya zeae Ech1591 ABC transporter YP_003004832.1 2870803 D 561229 CDS YP_003004833.1 251790112 8120367 2872007..2873131 1 NC_012912.1 PFAM: ABC-2 type transporter; KEGG: spe:Spro_1326 ABC-2 type transporter; ABC transporter 2873131 8120367 Dd1591_2514 Dickeya zeae Ech1591 ABC transporter YP_003004833.1 2872007 D 561229 CDS YP_003004834.1 251790113 8120368 2873223..2873993 1 NC_012912.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kpn:KPN_00818 putative DNase; Endonuclease/exonuclease/phosphatase 2873993 8120368 Dd1591_2515 Dickeya zeae Ech1591 Endonuclease/exonuclease/phosphatase YP_003004834.1 2873223 D 561229 CDS YP_003004835.1 251790114 8120369 2873990..2875195 1 NC_012912.1 PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: esa:ESA_02556 cardiolipin synthase 2; cardiolipin synthase 2 2875195 8120369 Dd1591_2516 Dickeya zeae Ech1591 cardiolipin synthase 2 YP_003004835.1 2873990 D 561229 CDS YP_003004836.1 251790115 8120370 2875706..2876674 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sgl:SG1481 transposase; transposase IS116/IS110/IS902 family protein 2876674 8120370 Dd1591_2517 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003004836.1 2875706 D 561229 CDS YP_003004837.1 251790116 8120371 complement(2876916..2877626) 1 NC_012912.1 PFAM: protein of unknown function UPF0005; KEGG: eca:ECA2812 hypothetical protein; hypothetical protein 2877626 8120371 Dd1591_2518 Dickeya zeae Ech1591 hypothetical protein YP_003004837.1 2876916 R 561229 CDS YP_003004838.1 251790117 8120372 complement(2877780..2878814) 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: spe:Spro_2536 ABC transporter-related protein; ABC transporter 2878814 8120372 Dd1591_2519 Dickeya zeae Ech1591 ABC transporter YP_003004838.1 2877780 R 561229 CDS YP_003004839.1 251790118 8120373 complement(2878811..2880403) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2535 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2880403 8120373 Dd1591_2520 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004839.1 2878811 R 561229 CDS YP_003004840.1 251790119 8120374 complement(2880438..2881454) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2534 extracellular solute-binding protein; extracellular solute-binding protein family 1 2881454 8120374 Dd1591_2521 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003004840.1 2880438 R 561229 CDS YP_003004841.1 251790120 8120375 complement(2881698..2882150) 1 NC_012912.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 2882150 moaE 8120375 moaE Dickeya zeae Ech1591 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_003004841.1 2881698 R 561229 CDS YP_003004842.1 251790121 8120376 complement(2882154..2882399) 1 NC_012912.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: eca:ECA2814 molybdopterin synthase small subunit; molybdopterin converting factor subunit 1 2882399 8120376 Dd1591_2523 Dickeya zeae Ech1591 molybdopterin converting factor subunit 1 YP_003004842.1 2882154 R 561229 CDS YP_003004843.1 251790122 8120377 complement(2882396..2882878) 1 NC_012912.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: eca:ECA2815 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 2882878 8120377 Dd1591_2524 Dickeya zeae Ech1591 molybdenum cofactor biosynthesis protein C YP_003004843.1 2882396 R 561229 CDS YP_003004844.1 251790123 8120378 complement(2882885..2883397) 1 NC_012912.1 TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: eca:ECA2816 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B 2883397 8120378 Dd1591_2525 Dickeya zeae Ech1591 molybdenum cofactor biosynthesis protein B YP_003004844.1 2882885 R 561229 CDS YP_003004845.1 251790124 8120379 complement(2883442..2884464) 1 NC_012912.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2884464 moaA 8120379 moaA Dickeya zeae Ech1591 molybdenum cofactor biosynthesis protein A YP_003004845.1 2883442 R 561229 CDS YP_003004846.1 251790125 8120380 complement(2884859..2885053) 1 NC_012912.1 KEGG: ent:Ent638_2133 hypothetical protein; hypothetical protein 2885053 8120380 Dd1591_2527 Dickeya zeae Ech1591 hypothetical protein YP_003004846.1 2884859 R 561229 CDS YP_003004847.1 251790126 8120381 complement(2885053..2886060) 1 NC_012912.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: eta:ETA_23730 ubiquinol oxidase subunit II, cyanide insensitive; cytochrome d ubiquinol oxidase subunit II 2886060 8120381 Dd1591_2528 Dickeya zeae Ech1591 cytochrome d ubiquinol oxidase subunit II YP_003004847.1 2885053 R 561229 CDS YP_003004848.1 251790127 8120382 complement(2886062..2887477) 1 NC_012912.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: eta:ETA_23720 ubiquinol oxidase subunit I, cyanide insensitive; cytochrome bd ubiquinol oxidase subunit I 2887477 8120382 Dd1591_2529 Dickeya zeae Ech1591 cytochrome bd ubiquinol oxidase subunit I YP_003004848.1 2886062 R 561229 CDS YP_003004849.1 251790128 8120383 2887608..2887751 1 NC_012912.1 hypothetical protein 2887751 8120383 Dd1591_2530 Dickeya zeae Ech1591 hypothetical protein YP_003004849.1 2887608 D 561229 CDS YP_003004850.1 251790129 8120384 2887819..2887938 1 NC_012912.1 hypothetical protein 2887938 8120384 Dd1591_2531 Dickeya zeae Ech1591 hypothetical protein YP_003004850.1 2887819 D 561229 CDS YP_003004851.1 251790130 8120385 2887975..2888223 1 NC_012912.1 hypothetical protein 2888223 8120385 Dd1591_2532 Dickeya zeae Ech1591 hypothetical protein YP_003004851.1 2887975 D 561229 CDS YP_003004852.1 251790131 8120386 2888247..2889167 1 NC_012912.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: eca:ECA2818 hypothetical protein; hypothetical protein 2889167 8120386 Dd1591_2533 Dickeya zeae Ech1591 hypothetical protein YP_003004852.1 2888247 D 561229 CDS YP_003004853.1 251790132 8120387 complement(2889190..2889405) 1 NC_012912.1 KEGG: eca:ECA3982 hypothetical protein; hypothetical protein 2889405 8120387 Dd1591_2534 Dickeya zeae Ech1591 hypothetical protein YP_003004853.1 2889190 R 561229 CDS YP_003004854.1 251790133 8120388 complement(2889497..2891509) 1 NC_012912.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2891509 8120388 Dd1591_2535 Dickeya zeae Ech1591 excinuclease ABC subunit B YP_003004854.1 2889497 R 561229 CDS YP_003004855.1 251790134 8120389 complement(2892242..2892922) 1 NC_012912.1 KEGG: eca:ECA2822 dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase; dethiobiotin synthase 2892922 8120389 Dd1591_2536 Dickeya zeae Ech1591 dethiobiotin synthase YP_003004855.1 2892242 R 561229 CDS YP_003004856.1 251790135 8120390 complement(2892915..2893697) 1 NC_012912.1 TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: eca:ECA2823 biotin synthesis protein; biotin biosynthesis protein BioC 2893697 8120390 Dd1591_2537 Dickeya zeae Ech1591 biotin biosynthesis protein BioC YP_003004856.1 2892915 R 561229 CDS YP_003004857.1 251790136 8120391 complement(2893684..2894838) 1 NC_012912.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 2894838 8120391 Dd1591_2538 Dickeya zeae Ech1591 8-amino-7-oxononanoate synthase YP_003004857.1 2893684 R 561229 CDS YP_003004858.1 251790137 8120392 complement(2894839..2895879) 1 NC_012912.1 KEGG: eca:ECA2825 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2895879 8120392 Dd1591_2539 Dickeya zeae Ech1591 biotin synthase YP_003004858.1 2894839 R 561229 CDS YP_003004859.1 251790138 8120393 2895966..2897249 1 NC_012912.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase 2897249 8120393 Dd1591_2540 Dickeya zeae Ech1591 adenosylmethionine--8-amino-7-oxononanoate transaminase YP_003004859.1 2895966 D 561229 CDS YP_003004860.1 251790139 8120394 2897679..2899655 1 NC_012912.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: avi:Avi_0107 beta-glucosidase protein; glycoside hydrolase family 3 domain-containing protein 2899655 8120394 Dd1591_2541 Dickeya zeae Ech1591 glycoside hydrolase family 3 domain-containing protein YP_003004860.1 2897679 D 561229 CDS YP_003004861.1 251790140 8120395 2899797..2900207 1 NC_012912.1 PFAM: LrgA family protein; KEGG: eca:ECA2828 hypothetical protein; hypothetical protein 2900207 8120395 Dd1591_2542 Dickeya zeae Ech1591 hypothetical protein YP_003004861.1 2899797 D 561229 CDS YP_003004862.1 251790141 8120396 2900207..2900902 1 NC_012912.1 PFAM: LrgB family protein; KEGG: eca:ECA2829 hypothetical protein; hypothetical protein 2900902 8120396 Dd1591_2543 Dickeya zeae Ech1591 hypothetical protein YP_003004862.1 2900207 D 561229 CDS YP_003004863.1 251790142 8120397 2901021..2902349 1 NC_012912.1 KEGG: bph:Bphy_0250 hypothetical protein; hypothetical protein 2902349 8120397 Dd1591_2544 Dickeya zeae Ech1591 hypothetical protein YP_003004863.1 2901021 D 561229 CDS YP_003004864.1 251790143 8120398 2902539..2903426 1 NC_012912.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 2903426 8120398 Dd1591_2545 Dickeya zeae Ech1591 cytidine deaminase YP_003004864.1 2902539 D 561229 CDS YP_003004865.1 251790144 8120399 2903703..2905400 1 NC_012912.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 2905400 8120399 Dd1591_2546 Dickeya zeae Ech1591 malate dehydrogenase YP_003004865.1 2903703 D 561229 CDS YP_003004866.1 251790145 8120400 2905602..2906837 1 NC_012912.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: eca:ECA2836 molybdopterin biosynthesis protein MoeA; molybdenum cofactor synthesis domain-containing protein 2906837 8120400 Dd1591_2547 Dickeya zeae Ech1591 molybdenum cofactor synthesis domain-containing protein YP_003004866.1 2905602 D 561229 CDS YP_003004867.1 251790146 8120401 2906837..2907595 1 NC_012912.1 TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: eca:ECA2837 molybdopterin biosynthesis protein MoeB; molybdopterin synthase sulfurylase MoeB 2907595 8120401 Dd1591_2548 Dickeya zeae Ech1591 molybdopterin synthase sulfurylase MoeB YP_003004867.1 2906837 D 561229 CDS YP_003004868.1 251790147 8120402 2907750..2908145 1 NC_012912.1 PFAM: thioesterase superfamily protein; KEGG: pmr:PMI1691 thioesterase superfamilyl protein; thioesterase superfamily protein 2908145 8120402 Dd1591_2549 Dickeya zeae Ech1591 thioesterase superfamily protein YP_003004868.1 2907750 D 561229 CDS YP_003004869.1 251790148 8120403 2908248..2909300 1 NC_012912.1 PFAM: glycosyl transferase family 2; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: esa:ESA_04142 hypothetical protein; glycosyl transferase family 2 2909300 8120403 Dd1591_2550 Dickeya zeae Ech1591 glycosyl transferase family 2 YP_003004869.1 2908248 D 561229 CDS YP_003004870.1 251790149 8120404 2909728..2910282 1 NC_012912.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: elf:LF82_p421 hypothetical protein; flavodoxin/nitric oxide synthase 2910282 8120404 Dd1591_2551 Dickeya zeae Ech1591 flavodoxin/nitric oxide synthase YP_003004870.1 2909728 D 561229 CDS YP_003004871.1 251790150 8120405 complement(2910342..2910515) 1 NC_012912.1 PFAM: protein of unknown function UPF0057; KEGG: kpe:KPK_2957 hypothetical protein; hypothetical protein 2910515 8120405 Dd1591_2552 Dickeya zeae Ech1591 hypothetical protein YP_003004871.1 2910342 R 561229 CDS YP_003004872.1 251790151 8120406 complement(2910671..2912857) 1 NC_012912.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: eca:ECA1186 hypothetical protein; coagulation factor 5/8 type domain-containing protein 2912857 8120406 Dd1591_2553 Dickeya zeae Ech1591 coagulation factor 5/8 type domain-containing protein YP_003004872.1 2910671 R 561229 CDS YP_003004873.1 251790152 8120407 complement(2912944..2913291) 1 NC_012912.1 KEGG: ecs:ECs1979 hypothetical protein; hypothetical protein 2913291 8120407 Dd1591_2554 Dickeya zeae Ech1591 hypothetical protein YP_003004873.1 2912944 R 561229 CDS YP_003004874.1 251790153 8120408 complement(2913631..2915841) 1 NC_012912.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: eca:ECA1185 hypothetical protein; coagulation factor 5/8 type domain-containing protein 2915841 8120408 Dd1591_2555 Dickeya zeae Ech1591 coagulation factor 5/8 type domain-containing protein YP_003004874.1 2913631 R 561229 CDS YP_003004875.1 251790154 8120409 complement(2915928..2916275) 1 NC_012912.1 KEGG: ecs:ECs1979 hypothetical protein; hypothetical protein 2916275 8120409 Dd1591_2556 Dickeya zeae Ech1591 hypothetical protein YP_003004875.1 2915928 R 561229 CDS YP_003004876.1 251790155 8120411 2916858..2917625 1 NC_012912.1 PFAM: protein of unknown function DUF980; KEGG: yen:YE2610 hypothetical protein; hypothetical protein 2917625 8120411 Dd1591_2557 Dickeya zeae Ech1591 hypothetical protein YP_003004876.1 2916858 D 561229 CDS YP_003004877.1 251790156 8120413 2918466..2918984 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein; Hcp1 family type VI secretion system effector 2918984 8120413 Dd1591_2558 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003004877.1 2918466 D 561229 CDS YP_003004878.1 251790157 8120414 2919149..2921005 1 NC_012912.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 putative rhs accessory genetic element; type VI secretion system Vgr family protein 2921005 8120414 Dd1591_2559 Dickeya zeae Ech1591 type VI secretion system Vgr family protein YP_003004878.1 2919149 D 561229 CDS YP_003004879.1 251790158 8120415 2921031..2921555 1 NC_012912.1 PFAM: PAAR repeat-containing protein; KEGG: asa:ASA_3828 hypothetical protein; PAAR repeat-containing protein 2921555 8120415 Dd1591_2560 Dickeya zeae Ech1591 PAAR repeat-containing protein YP_003004879.1 2921031 D 561229 CDS YP_003004880.1 251790159 8120416 2921555..2922445 1 NC_012912.1 KEGG: ses:SARI_02589 hypothetical protein; hypothetical protein 2922445 8120416 Dd1591_2561 Dickeya zeae Ech1591 hypothetical protein YP_003004880.1 2921555 D 561229 CDS YP_003004881.1 251790160 8120417 2922442..2922867 1 NC_012912.1 KEGG: aha:AHA_2048 hypothetical protein; hypothetical protein 2922867 8120417 Dd1591_2562 Dickeya zeae Ech1591 hypothetical protein YP_003004881.1 2922442 D 561229 CDS YP_003004882.1 251790161 8120419 complement(2923017..2923901) 1 NC_012912.1 PFAM: Integrase catalytic region; KEGG: yps:YPTB1892 putative transposase; Integrase catalytic region 2923901 8120419 Dd1591_2564 Dickeya zeae Ech1591 Integrase catalytic region YP_003004882.1 2923017 R 561229 CDS YP_003004883.1 251790162 8120422 complement(2925360..2925842) 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: ypg:YpAngola_A2064 hypothetical protein; transposase IS3/IS911 family protein 2925842 8120422 Dd1591_2567 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003004883.1 2925360 R 561229 CDS YP_003004884.1 251790163 8120423 2925892..2928687 1 NC_012912.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: eca:ECA4278 rhs-family protein; YD repeat protein 2928687 8120423 Dd1591_2568 Dickeya zeae Ech1591 YD repeat protein YP_003004884.1 2925892 D 561229 CDS YP_003004885.1 251790164 8120424 2928687..2929169 1 NC_012912.1 PFAM: pentapeptide repeat protein; KEGG: pae:PA2461 hypothetical protein; pentapeptide repeat protein 2929169 8120424 Dd1591_2569 Dickeya zeae Ech1591 pentapeptide repeat protein YP_003004885.1 2928687 D 561229 CDS YP_003004886.1 251790165 8120425 complement(2929414..2929575) 1 NC_012912.1 KEGG: eca:ECA3392 hypothetical protein; hypothetical protein 2929575 8120425 Dd1591_2570 Dickeya zeae Ech1591 hypothetical protein YP_003004886.1 2929414 R 561229 CDS YP_003004887.1 251790166 8120427 2930088..2930318 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu4299 hypothetical protein; XRE family transcriptional regulator 2930318 8120427 Dd1591_2572 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003004887.1 2930088 D 561229 CDS YP_003004888.1 251790167 8120428 2930396..2930629 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu4299 hypothetical protein; XRE family transcriptional regulator 2930629 8120428 Dd1591_2573 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003004888.1 2930396 D 561229 CDS YP_003004889.1 251790168 8120430 2930931..2931332 1 NC_012912.1 PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA1665 DNA-binding protein Hns; histone family protein nucleoid-structuring protein H-NS 2931332 8120430 Dd1591_2575 Dickeya zeae Ech1591 histone family protein nucleoid-structuring protein H-NS YP_003004889.1 2930931 D 561229 CDS YP_003004890.1 251790169 8120431 complement(2931325..2931594) 1 NC_012912.1 KEGG: ecc:c0291 hypothetical protein; hypothetical protein 2931594 8120431 Dd1591_2576 Dickeya zeae Ech1591 hypothetical protein YP_003004890.1 2931325 R 561229 CDS YP_003004891.1 251790170 8120432 complement(2931861..2932412) 1 NC_012912.1 PFAM: protein of unknown function DUF606; KEGG: kpe:KPK_2583 hypothetical protein; hypothetical protein 2932412 8120432 Dd1591_2577 Dickeya zeae Ech1591 hypothetical protein YP_003004891.1 2931861 R 561229 CDS YP_003004892.1 251790171 8120433 complement(2932422..2932856) 1 NC_012912.1 PFAM: protein of unknown function DUF606; KEGG: ent:Ent638_1093 hypothetical protein; hypothetical protein 2932856 8120433 Dd1591_2578 Dickeya zeae Ech1591 hypothetical protein YP_003004892.1 2932422 R 561229 CDS YP_003004893.1 251790172 8117987 2932956..2933891 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_2581 transcriptional regulator, LysR family; LysR family transcriptional regulator 2933891 8117987 Dd1591_2579 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004893.1 2932956 D 561229 CDS YP_003004894.1 251790173 8117988 2934162..2934446 1 NC_012912.1 KEGG: vco:VC0395_0742 transcriptional regulator, CopG family; CopG family transcriptional regulator 2934446 8117988 Dd1591_2580 Dickeya zeae Ech1591 CopG family transcriptional regulator YP_003004894.1 2934162 D 561229 CDS YP_003004895.1 251790174 8117989 2934443..2934754 1 NC_012912.1 PFAM: plasmid stabilization system; KEGG: rle:pRL110045 hypothetical protein; plasmid stabilization system protein 2934754 8117989 Dd1591_2581 Dickeya zeae Ech1591 plasmid stabilization system protein YP_003004895.1 2934443 D 561229 CDS YP_003004896.1 251790175 8117991 complement(2935044..2936033) 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 2936033 8117991 Dd1591_2583 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003004896.1 2935044 R 561229 CDS YP_003004897.1 251790176 8117993 complement(2936415..2937149) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4478 amino acid ABC transporter, ATP-binding protein; ABC transporter 2937149 8117993 Dd1591_2585 Dickeya zeae Ech1591 ABC transporter YP_003004897.1 2936415 R 561229 CDS YP_003004898.1 251790177 8117994 complement(2937146..2937916) 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4479 amino acid ABC transporter permease; polar amino acid ABC transporter permease 2937916 8117994 Dd1591_2586 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003004898.1 2937146 R 561229 CDS YP_003004899.1 251790178 8117995 complement(2937922..2938617) 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4480 amino acid ABC transporter permease; polar amino acid ABC transporter permease 2938617 8117995 Dd1591_2587 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003004899.1 2937922 R 561229 CDS YP_003004900.1 251790179 8117996 complement(2938640..2939392) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA4481 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2939392 8117996 Dd1591_2588 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003004900.1 2938640 R 561229 CDS YP_003004901.1 251790180 8117997 complement(2939515..2939937) 1 NC_012912.1 KEGG: eca:ECA4482 hypothetical protein; hypothetical protein 2939937 8117997 Dd1591_2589 Dickeya zeae Ech1591 hypothetical protein YP_003004901.1 2939515 R 561229 CDS YP_003004902.1 251790181 8117998 complement(2940055..2940978) 1 NC_012912.1 Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; nitrogen assimilation transcriptional regulator 2940978 8117998 Dd1591_2590 Dickeya zeae Ech1591 nitrogen assimilation transcriptional regulator YP_003004902.1 2940055 R 561229 CDS YP_003004903.1 251790182 8117999 2941323..2942525 1 NC_012912.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2942525 8117999 Dd1591_2591 Dickeya zeae Ech1591 aspartate aminotransferase YP_003004903.1 2941323 D 561229 CDS YP_003004904.1 251790183 8118000 complement(2942818..2943588) 1 NC_012912.1 PFAM: LamB/YcsF family protein; KEGG: eca:ECA4486 hypothetical protein; LamB/YcsF family protein 2943588 8118000 Dd1591_2592 Dickeya zeae Ech1591 LamB/YcsF family protein YP_003004904.1 2942818 R 561229 CDS YP_003004905.1 251790184 8118001 complement(2943595..2944575) 1 NC_012912.1 KEGG: eca:ECA4487 putative allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase related protein 2944575 8118001 Dd1591_2593 Dickeya zeae Ech1591 urea amidolyase related protein YP_003004905.1 2943595 R 561229 CDS YP_003004906.1 251790185 8118002 complement(2944572..2945261) 1 NC_012912.1 PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: eca:ECA4488 putative allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 2945261 8118002 Dd1591_2594 Dickeya zeae Ech1591 allophanate hydrolase subunit 1 YP_003004906.1 2944572 R 561229 CDS YP_003004907.1 251790186 8118003 complement(2945269..2946105) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4489 putative extracellular solute-binding protein; extracellular solute-binding protein family 3 2946105 8118003 Dd1591_2595 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003004907.1 2945269 R 561229 CDS YP_003004908.1 251790187 8118004 2946395..2947312 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA4490 hypothetical protein; hypothetical protein 2947312 8118004 Dd1591_2596 Dickeya zeae Ech1591 hypothetical protein YP_003004908.1 2946395 D 561229 CDS YP_003004909.1 251790188 8118005 complement(2947366..2947791) 1 NC_012912.1 KEGG: yen:YE2498 hypothetical protein; hypothetical protein 2947791 8118005 Dd1591_2597 Dickeya zeae Ech1591 hypothetical protein YP_003004909.1 2947366 R 561229 CDS YP_003004910.1 251790189 8118006 complement(2947882..2948844) 1 NC_012912.1 PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc0625 transcription regulator protein; AraC family transcriptional regulator 2948844 8118006 Dd1591_2598 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003004910.1 2947882 R 561229 CDS YP_003004911.1 251790190 8118007 2949140..2950288 1 NC_012912.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: abu:Abu_0784 iron-containing NADP-dependent alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2950288 8118007 Dd1591_2599 Dickeya zeae Ech1591 iron-containing alcohol dehydrogenase YP_003004911.1 2949140 D 561229 CDS YP_003004912.1 251790191 8118008 2950744..2951694 1 NC_012912.1 PFAM: periplasmic solute binding protein; KEGG: spe:Spro_2133 periplasmic solute binding protein; periplasmic solute binding protein 2951694 8118008 Dd1591_2600 Dickeya zeae Ech1591 periplasmic solute binding protein YP_003004912.1 2950744 D 561229 CDS YP_003004913.1 251790192 8118009 2951691..2952587 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_2132 ABC transporter-related protein; ABC transporter 2952587 8118009 Dd1591_2601 Dickeya zeae Ech1591 ABC transporter YP_003004913.1 2951691 D 561229 CDS YP_003004914.1 251790193 8118010 2952580..2953437 1 NC_012912.1 PFAM: ABC-3 protein; transport system permease protein; KEGG: eca:ECA2394 chelated iron transport system membrane protein; ABC transporter 2953437 8118010 Dd1591_2602 Dickeya zeae Ech1591 ABC transporter YP_003004914.1 2952580 D 561229 CDS YP_003004915.1 251790194 8118011 2953439..2954266 1 NC_012912.1 PFAM: ABC-3 protein; KEGG: plu:plu2675 chelated iron transport system membrane protein YfeD-like protein; ABC transporter 2954266 8118011 Dd1591_2603 Dickeya zeae Ech1591 ABC transporter YP_003004915.1 2953439 D 561229 CDS YP_003004916.1 251790195 8118012 2954403..2955335 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_04761 hypothetical protein; LysR family transcriptional regulator 2955335 8118012 Dd1591_2604 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004916.1 2954403 D 561229 CDS YP_003004917.1 251790196 8118013 complement(2955319..2956227) 1 NC_012912.1 TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase; KEGG: ent:Ent638_3772 acyl transferase domain-containing protein; malonate decarboxylase subunit epsilon 2956227 8118013 Dd1591_2605 Dickeya zeae Ech1591 malonate decarboxylase subunit epsilon YP_003004917.1 2955319 R 561229 CDS YP_003004918.1 251790197 8118014 complement(2956232..2956846) 1 NC_012912.1 Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 2956846 8118014 Dd1591_2606 Dickeya zeae Ech1591 phosphoribosyl-dephospho-CoA transferase YP_003004918.1 2956232 R 561229 CDS YP_003004919.1 251790198 8118015 complement(2956868..2957827) 1 NC_012912.1 TIGRFAM: auxin efflux carrier; PFAM: Auxin Efflux Carrier; KEGG: ent:Ent638_3774 auxin efflux carrier; auxin efflux carrier 2957827 8118015 Dd1591_2607 Dickeya zeae Ech1591 auxin efflux carrier YP_003004919.1 2956868 R 561229 CDS YP_003004920.1 251790199 8118016 complement(2958079..2958879) 1 NC_012912.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: cko:CKO_04765 hypothetical protein; malonate decarboxylase subunit gamma 2958879 8118016 Dd1591_2608 Dickeya zeae Ech1591 malonate decarboxylase subunit gamma YP_003004920.1 2958079 R 561229 CDS YP_003004921.1 251790200 8118017 complement(2958876..2959709) 1 NC_012912.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 2959709 8118017 Dd1591_2609 Dickeya zeae Ech1591 malonate decarboxylase subunit beta YP_003004921.1 2958876 R 561229 CDS YP_003004922.1 251790201 8118018 complement(2959702..2960001) 1 NC_012912.1 TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: ent:Ent638_3777 malonate decarboxylase delta subunit; malonate decarboxylase acyl carrier protein 2960001 8118018 Dd1591_2610 Dickeya zeae Ech1591 malonate decarboxylase acyl carrier protein YP_003004922.1 2959702 R 561229 CDS YP_003004923.1 251790202 8118019 complement(2960011..2960868) 1 NC_012912.1 KEGG: ses:SARI_04158 hypothetical protein; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB 2960868 8118019 Dd1591_2611 Dickeya zeae Ech1591 triphosphoribosyl-dephospho-CoA synthase MdcB YP_003004923.1 2960011 R 561229 CDS YP_003004924.1 251790203 8118020 complement(2960879..2962534) 1 NC_012912.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: cko:CKO_04769 hypothetical protein; malonate decarboxylase subunit alpha 2962534 8118020 Dd1591_2612 Dickeya zeae Ech1591 malonate decarboxylase subunit alpha YP_003004924.1 2960879 R 561229 CDS YP_003004925.1 251790204 8118021 complement(2962945..2963922) 1 NC_012912.1 PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: eca:ECA1568 putative chemotaxis signal transduction protein; response regulator receiver modulated CheW protein 2963922 8118021 Dd1591_2613 Dickeya zeae Ech1591 response regulator receiver modulated CheW protein YP_003004925.1 2962945 R 561229 CDS YP_003004926.1 251790205 8118022 complement(2964572..2966359) 1 NC_012912.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: eca:ECA4420 ABC transporter ATP-binding protein; ABC transporter 2966359 8118022 Dd1591_2614 Dickeya zeae Ech1591 ABC transporter YP_003004926.1 2964572 R 561229 CDS YP_003004927.1 251790206 8118023 complement(2966363..2967283) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4421 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 2967283 8118023 Dd1591_2615 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004927.1 2966363 R 561229 CDS YP_003004928.1 251790207 8118024 complement(2967280..2968254) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4422 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 2968254 8118024 Dd1591_2616 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004928.1 2967280 R 561229 CDS YP_003004929.1 251790208 8118025 complement(2968305..2969273) 1 NC_012912.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: eca:ECA4423 putative nucleoside hydrolase; Inosine/uridine-preferring nucleoside hydrolase 2969273 8118025 Dd1591_2617 Dickeya zeae Ech1591 Inosine/uridine-preferring nucleoside hydrolase YP_003004929.1 2968305 R 561229 CDS YP_003004930.1 251790209 8118026 complement(2969273..2970223) 1 NC_012912.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: eca:ECA4424 putative nucleoside hydrolase protein; Inosine/uridine-preferring nucleoside hydrolase 2970223 8118026 Dd1591_2618 Dickeya zeae Ech1591 Inosine/uridine-preferring nucleoside hydrolase YP_003004930.1 2969273 R 561229 CDS YP_003004931.1 251790210 8118027 complement(2970512..2972050) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4426 putative extracellular solute-binding protein; extracellular solute-binding protein family 5 2972050 8118027 Dd1591_2619 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003004931.1 2970512 R 561229 CDS YP_003004932.1 251790211 8118028 2972217..2973116 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4427 LysR family transcriptional regulator; LysR family transcriptional regulator 2973116 8118028 Dd1591_2620 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004932.1 2972217 D 561229 CDS YP_003004933.1 251790212 8118029 2973291..2974055 1 NC_012912.1 PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: eca:ECA1560 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase 2974055 8118029 Dd1591_2621 Dickeya zeae Ech1591 CDP-diacylglycerol pyrophosphatase YP_003004933.1 2973291 D 561229 CDS YP_003004934.1 251790213 8118030 2974275..2975201 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1559 LysR family transcriptional regulator; LysR family transcriptional regulator 2975201 8118030 Dd1591_2622 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004934.1 2974275 D 561229 CDS YP_003004935.1 251790214 8118031 complement(2975563..2976657) 1 NC_012912.1 KEGG: eca:ECA1558 putative sulfate ester transporter, periplasmic binding component; putative sulfate ester transporter, periplasmic binding component 2976657 8118031 Dd1591_2623 Dickeya zeae Ech1591 putative sulfate ester transporter, periplasmic binding component YP_003004935.1 2975563 R 561229 CDS YP_003004936.1 251790215 8118032 2976793..2978493 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1557 putative sulfate ester transporter, permease component; binding-protein-dependent transport systems inner membrane component 2978493 8118032 Dd1591_2624 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004936.1 2976793 D 561229 CDS YP_003004937.1 251790216 8118033 2978490..2979293 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1556 putative sulfate ester transporter, ATP-binding component; ABC transporter 2979293 8118033 Dd1591_2625 Dickeya zeae Ech1591 ABC transporter YP_003004937.1 2978490 D 561229 CDS YP_003004938.1 251790217 8118034 2979324..2981117 1 NC_012912.1 PFAM: Thioredoxin domain; KEGG: eca:ECA1555 hypothetical protein; Thioredoxin domain-containing protein 2981117 8118034 Dd1591_2626 Dickeya zeae Ech1591 Thioredoxin domain-containing protein YP_003004938.1 2979324 D 561229 CDS YP_003004939.1 251790218 8118035 2981330..2982418 1 NC_012912.1 KEGG: mxa:MXAN_6237 hypothetical protein; hypothetical protein 2982418 8118035 Dd1591_2627 Dickeya zeae Ech1591 hypothetical protein YP_003004939.1 2981330 D 561229 CDS YP_003004940.1 251790219 8118036 complement(2982623..2983039) 1 NC_012912.1 similar to GE17595 gene product from transcript GE17595-RA; KEGG: GE17595 gene product from transcript GE17595-RA; hypothetical protein 2983039 8118036 Dd1591_2628 Dickeya zeae Ech1591 hypothetical protein YP_003004940.1 2982623 R 561229 CDS YP_003004941.1 251790220 8118037 complement(2983359..2984030) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpe:KPK_2723 methionine uptake ABC transporter (MUT) family, permease protein; binding-protein-dependent transport systems inner membrane component 2984030 8118037 Dd1591_2629 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004941.1 2983359 R 561229 CDS YP_003004942.1 251790221 8118038 complement(2984015..2984806) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01653 D- and L-methionine ABC transporter ATP-binding protein; ABC transporter 2984806 8118038 Dd1591_2630 Dickeya zeae Ech1591 ABC transporter YP_003004942.1 2984015 R 561229 CDS YP_003004943.1 251790222 8118039 complement(2984810..2985616) 1 NC_012912.1 PFAM: NLPA lipoprotein; KEGG: esa:ESA_02817 hypothetical protein; NLPA lipoprotein 2985616 8118039 Dd1591_2631 Dickeya zeae Ech1591 NLPA lipoprotein YP_003004943.1 2984810 R 561229 CDS YP_003004944.1 251790223 8118040 complement(2985660..2986694) 1 NC_012912.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: yps:YPTB1347 putative iron/ascorbate oxidoreductase family protein; 2OG-Fe(II) oxygenase 2986694 8118040 Dd1591_2632 Dickeya zeae Ech1591 2OG-Fe(II) oxygenase YP_003004944.1 2985660 R 561229 CDS YP_003004945.1 251790224 8118041 2987119..2987892 1 NC_012912.1 KEGG: spe:Spro_1006 putative periplasmic ligand-binding sensor protein; putative periplasmic ligand-binding sensor protein 2987892 8118041 Dd1591_2633 Dickeya zeae Ech1591 putative periplasmic ligand-binding sensor protein YP_003004945.1 2987119 D 561229 CDS YP_003004946.1 251790225 8118042 2988059..2989006 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4305 LysR family transcriptional regulator; LysR family transcriptional regulator 2989006 8118042 Dd1591_2634 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004946.1 2988059 D 561229 CDS YP_003004947.1 251790226 8118043 complement(2988993..2989691) 1 NC_012912.1 KEGG: eca:ECA4304 hypothetical protein; hypothetical protein 2989691 8118043 Dd1591_2635 Dickeya zeae Ech1591 hypothetical protein YP_003004947.1 2988993 R 561229 CDS YP_003004948.1 251790227 8118044 complement(2989756..2992536) 1 NC_012912.1 KEGG: eca:ECA4303 hypothetical protein; hypothetical protein 2992536 8118044 Dd1591_2636 Dickeya zeae Ech1591 hypothetical protein YP_003004948.1 2989756 R 561229 CDS YP_003004949.1 251790228 8118045 complement(2992547..2994868) 1 NC_012912.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA4302 TonB-dependent receptor; TonB-dependent receptor 2994868 8118045 Dd1591_2637 Dickeya zeae Ech1591 TonB-dependent receptor YP_003004949.1 2992547 R 561229 CDS YP_003004950.1 251790229 8118046 complement(2994960..2995997) 1 NC_012912.1 KEGG: eca:ECA4301 putative sulfate ester binding protein; putative sulfate ester binding protein 2995997 8118046 Dd1591_2638 Dickeya zeae Ech1591 putative sulfate ester binding protein YP_003004950.1 2994960 R 561229 CDS YP_003004951.1 251790230 8118047 2996525..2997382 1 NC_012912.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: eca:ECA4300 TonB protein; TonB family protein 2997382 8118047 Dd1591_2639 Dickeya zeae Ech1591 TonB family protein YP_003004951.1 2996525 D 561229 CDS YP_003004952.1 251790231 8118048 2997396..2998094 1 NC_012912.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: eca:ECA4299 putative biopolymer transport protein; MotA/TolQ/ExbB proton channel 2998094 8118048 Dd1591_2640 Dickeya zeae Ech1591 MotA/TolQ/ExbB proton channel YP_003004952.1 2997396 D 561229 CDS YP_003004953.1 251790232 8118049 2998097..2998498 1 NC_012912.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: eca:ECA4298 putative biopolymer transport protein; Biopolymer transport protein ExbD/TolR 2998498 8118049 Dd1591_2641 Dickeya zeae Ech1591 Biopolymer transport protein ExbD/TolR YP_003004953.1 2998097 D 561229 CDS YP_003004954.1 251790233 8118050 2998511..3000097 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4297 sulfate ester ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 3000097 8118050 Dd1591_2642 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003004954.1 2998511 D 561229 CDS YP_003004955.1 251790234 8118051 3000747..3002159 1 NC_012912.1 KEGG: efe:EFER_1552 putative membrane-associated diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3002159 8118051 Dd1591_2643 Dickeya zeae Ech1591 diguanylate cyclase YP_003004955.1 3000747 D 561229 CDS YP_003004956.1 251790235 8118052 complement(3002209..3003057) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_13850 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 3003057 8118052 Dd1591_2644 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003004956.1 3002209 R 561229 CDS YP_003004957.1 251790236 8118053 complement(3003067..3004398) 1 NC_012912.1 PFAM: FAD dependent oxidoreductase; KEGG: eta:ETA_13840 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3004398 8118053 Dd1591_2645 Dickeya zeae Ech1591 FAD dependent oxidoreductase YP_003004957.1 3003067 R 561229 CDS YP_003004958.1 251790237 8118054 3004878..3005684 1 NC_012912.1 PFAM: peptidase C1A papain; KEGG: xft:PD0125 cysteine protease; peptidase C1A papain 3005684 8118054 Dd1591_2646 Dickeya zeae Ech1591 peptidase C1A papain YP_003004958.1 3004878 D 561229 CDS YP_003004959.1 251790238 8118056 3006412..3007818 1 NC_012912.1 PFAM: Integrase catalytic region; KEGG: kpe:KPK_B0045 transposase; Integrase catalytic region 3007818 8118056 Dd1591_2648 Dickeya zeae Ech1591 Integrase catalytic region YP_003004959.1 3006412 D 561229 CDS YP_003004960.1 251790239 8118057 complement(3007873..3008181) 1 NC_012912.1 KEGG: shm:Shewmr7_1024 hypothetical protein; hypothetical protein 3008181 8118057 Dd1591_2649 Dickeya zeae Ech1591 hypothetical protein YP_003004960.1 3007873 R 561229 CDS YP_003004961.1 251790240 8118059 3010104..3010196 1 NC_012912.1 hypothetical protein 3010196 8118059 Dd1591_2651 Dickeya zeae Ech1591 hypothetical protein YP_003004961.1 3010104 D 561229 CDS YP_003004962.1 251790241 8118060 3010253..3011374 1 NC_012912.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: plu:plu2192 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 3011374 8118060 Dd1591_2652 Dickeya zeae Ech1591 UBA/THIF-type NAD/FAD binding protein YP_003004962.1 3010253 D 561229 CDS YP_003004963.1 251790242 8118061 3011371..3012048 1 NC_012912.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: hypothetical protein; 2OG-Fe(II) oxygenase 3012048 8118061 Dd1591_2653 Dickeya zeae Ech1591 2OG-Fe(II) oxygenase YP_003004963.1 3011371 D 561229 CDS YP_003004964.1 251790243 8118062 3012052..3012942 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_4057 hypothetical protein; hypothetical protein 3012942 8118062 Dd1591_2654 Dickeya zeae Ech1591 hypothetical protein YP_003004964.1 3012052 D 561229 CDS YP_003004965.1 251790244 8118065 complement(3013523..3014803) 1 NC_012912.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 3014803 lacY 8118065 lacY Dickeya zeae Ech1591 galactoside permease YP_003004965.1 3013523 R 561229 CDS YP_003004966.1 251790245 8118066 complement(3014857..3016986) 1 NC_012912.1 PFAM: glycoside hydrolase clan GH-D; KEGG: esa:ESA_03854 hypothetical protein; glycoside hydrolase clan GH-D 3016986 8118066 Dd1591_2658 Dickeya zeae Ech1591 glycoside hydrolase clan GH-D YP_003004966.1 3014857 R 561229 CDS YP_003004967.1 251790246 8119101 complement(3017124..3018146) 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ent:Ent638_4078 LacI family transcription regulator; LacI family transcriptional regulator 3018146 8119101 Dd1591_2659 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003004967.1 3017124 R 561229 CDS YP_003004968.1 251790247 8119102 complement(3018308..3018949) 1 NC_012912.1 nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase; formate dehydrogenase-N subunit gamma 3018949 8119102 Dd1591_2660 Dickeya zeae Ech1591 formate dehydrogenase-N subunit gamma YP_003004968.1 3018308 R 561229 CDS YP_003004969.1 251790248 8119103 complement(3018942..3019850) 1 NC_012912.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA1407 formate dehydrogenase, nitrate-inducible, iron-sulfur subunit; formate dehydrogenase subunit beta 3019850 8119103 Dd1591_2661 Dickeya zeae Ech1591 formate dehydrogenase subunit beta YP_003004969.1 3018942 R 561229 CDS YP_003004970.1 251790249 8119104 complement(3019863..3022910) 1 NC_012912.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: eca:ECA1408 formate dehydrogenase, nitrate-inducible, major subunit; formate dehydrogenase subunit alpha 3022910 8119104 Dd1591_2662 Dickeya zeae Ech1591 formate dehydrogenase subunit alpha YP_003004970.1 3019863 R 561229 CDS YP_003004971.1 251790250 8119105 3023454..3024509 1 NC_012912.1 KEGG: bba:Bd0901 Zn-dependent hydrolase; Zn-dependent hydrolase 3024509 8119105 Dd1591_2663 Dickeya zeae Ech1591 Zn-dependent hydrolase YP_003004971.1 3023454 D 561229 CDS YP_003004972.1 251790251 8119106 3024564..3024923 1 NC_012912.1 PFAM: HicB family protein; KEGG: plu:plu0706 hypothetical protein; HicB family protein 3024923 8119106 Dd1591_2664 Dickeya zeae Ech1591 HicB family protein YP_003004972.1 3024564 D 561229 CDS YP_003004973.1 251790252 8119108 complement(3025387..3026010) 1 NC_012912.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: psp:PSPPH_2762 hypothetical protein; Dimethylmenaquinone methyltransferase 3026010 8119108 Dd1591_2666 Dickeya zeae Ech1591 Dimethylmenaquinone methyltransferase YP_003004973.1 3025387 R 561229 CDS YP_003004974.1 251790253 8119109 complement(3026007..3026852) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_2760 achromobactin transport ATP-binding protein CbrD; ABC transporter 3026852 8119109 Dd1591_2667 Dickeya zeae Ech1591 ABC transporter YP_003004974.1 3026007 R 561229 CDS YP_003004975.1 251790254 8119110 complement(3026864..3027913) 1 NC_012912.1 PFAM: transport system permease protein; KEGG: psb:Psyr_2592 transport system permease protein; transport system permease protein 3027913 8119110 Dd1591_2668 Dickeya zeae Ech1591 transport system permease protein YP_003004975.1 3026864 R 561229 CDS YP_003004976.1 251790255 8119111 complement(3027906..3028928) 1 NC_012912.1 PFAM: transport system permease protein; KEGG: sgl:SGP1_0037 achromobactin ABC transporter permease component CbrB; transport system permease protein 3028928 8119111 Dd1591_2669 Dickeya zeae Ech1591 transport system permease protein YP_003004976.1 3027906 R 561229 CDS YP_003004977.1 251790256 8119112 complement(3028925..3029743) 1 NC_012912.1 PFAM: periplasmic binding protein; KEGG: sgl:SGP1_0038 achromobactin ABC transporter periplasmic component CbrA; periplasmic binding protein 3029743 8119112 Dd1591_2670 Dickeya zeae Ech1591 periplasmic binding protein YP_003004977.1 3028925 R 561229 CDS YP_003004978.1 251790257 8119113 complement(3030113..3031102) 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 3031102 8119113 Dd1591_2671 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003004978.1 3030113 R 561229 CDS YP_003004979.1 251790258 8119114 complement(3031418..3033331) 1 NC_012912.1 PFAM: IucA/IucC family protein; KEGG: psb:Psyr_2589 IucA/IucC; IucA/IucC family protein 3033331 8119114 Dd1591_2672 Dickeya zeae Ech1591 IucA/IucC family protein YP_003004979.1 3031418 R 561229 CDS YP_003004980.1 251790259 8119115 complement(3033336..3034112) 1 NC_012912.1 PFAM: HpcH/HpaI aldolase; KEGG: psp:PSPPH_2755 achromobactin biosynthetic protein AcsB; HpcH/HpaI aldolase 3034112 8119115 Dd1591_2673 Dickeya zeae Ech1591 HpcH/HpaI aldolase YP_003004980.1 3033336 R 561229 CDS YP_003004981.1 251790260 8119116 complement(3034106..3035962) 1 NC_012912.1 PFAM: IucA/IucC family protein; KEGG: sgl:SGP1_0041 achromobactin biosynthetic and transport gene AcsC; IucA/IucC family protein 3035962 8119116 Dd1591_2674 Dickeya zeae Ech1591 IucA/IucC family protein YP_003004981.1 3034106 R 561229 CDS YP_003004982.1 251790261 8119117 complement(3036016..3037464) 1 NC_012912.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_2586 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 3037464 8119117 Dd1591_2675 Dickeya zeae Ech1591 EmrB/QacA subfamily drug resistance transporter YP_003004982.1 3036016 R 561229 CDS YP_003004983.1 251790262 8119118 complement(3037454..3038710) 1 NC_012912.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: psb:Psyr_2585 Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2; Diaminopimelate decarboxylase 3038710 8119118 Dd1591_2676 Dickeya zeae Ech1591 Diaminopimelate decarboxylase YP_003004983.1 3037454 R 561229 CDS YP_003004984.1 251790263 8119119 complement(3038703..3040589) 1 NC_012912.1 PFAM: IucA/IucC family protein; KEGG: psb:Psyr_2584 IucA/IucC; IucA/IucC family protein 3040589 8119119 Dd1591_2677 Dickeya zeae Ech1591 IucA/IucC family protein YP_003004984.1 3038703 R 561229 CDS YP_003004985.1 251790264 8119120 complement(3040696..3042810) 1 NC_012912.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA2810 TonB-dependent ferric achromobactin receptor; TonB-dependent receptor 3042810 8119120 Dd1591_2678 Dickeya zeae Ech1591 TonB-dependent receptor YP_003004985.1 3040696 R 561229 CDS YP_003004986.1 251790265 8119121 complement(3042976..3044358) 1 NC_012912.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 3044358 8119121 Dd1591_2679 Dickeya zeae Ech1591 diaminobutyrate--2-oxoglutarate aminotransferase YP_003004986.1 3042976 R 561229 CDS YP_003004987.1 251790266 8119122 complement(3044774..3045670) 1 NC_012912.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1413 phosphonate ABC transporter, inner membrane subunit; phosphonate ABC transporter permease 3045670 8119122 Dd1591_2680 Dickeya zeae Ech1591 phosphonate ABC transporter permease YP_003004987.1 3044774 R 561229 CDS YP_003004988.1 251790267 8119123 complement(3045667..3046533) 1 NC_012912.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1412 phosphonate ABC transporter, inner membrane subunit; phosphonate ABC transporter permease 3046533 8119123 Dd1591_2681 Dickeya zeae Ech1591 phosphonate ABC transporter permease YP_003004988.1 3045667 R 561229 CDS YP_003004989.1 251790268 8119124 complement(3046705..3047637) 1 NC_012912.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: spe:Spro_1411 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter substrate-binding protein 3047637 8119124 Dd1591_2682 Dickeya zeae Ech1591 phosphonate ABC transporter substrate-binding protein YP_003004989.1 3046705 R 561229 CDS YP_003004990.1 251790269 8119125 complement(3047745..3048605) 1 NC_012912.1 KEGG: spe:Spro_1410 phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase 3048605 8119125 Dd1591_2683 Dickeya zeae Ech1591 phosphonate ABC transporter ATPase YP_003004990.1 3047745 R 561229 CDS YP_003004991.1 251790270 8119126 complement(3048782..3049702) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpi:Rpic_4851 transcriptional regulator, LysR family; LysR family transcriptional regulator 3049702 8119126 Dd1591_2684 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003004991.1 3048782 R 561229 CDS YP_003004992.1 251790271 8119127 3049805..3050713 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: ara:Arad_0567 oxidoreductase protein; aldo/keto reductase 3050713 8119127 Dd1591_2685 Dickeya zeae Ech1591 aldo/keto reductase YP_003004992.1 3049805 D 561229 CDS YP_003004993.1 251790272 8119128 complement(3050762..3051511) 1 NC_012912.1 TIGRFAM: phosphonate metabolism protein PhnP; PFAM: beta-lactamase domain protein; KEGG: spe:Spro_0512 carbon-phosphorus lyase complex accessory protein; phosphonate metabolism protein PhnP 3051511 8119128 Dd1591_2686 Dickeya zeae Ech1591 phosphonate metabolism protein PhnP YP_003004993.1 3050762 R 561229 CDS YP_003004994.1 251790273 8119129 complement(3051530..3052090) 1 NC_012912.1 TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: yen:YE0470 ribose 1,5-bisphosphokinase; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3052090 8119129 Dd1591_2687 Dickeya zeae Ech1591 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN YP_003004994.1 3051530 R 561229 CDS YP_003004995.1 251790274 8119130 complement(3052090..3053259) 1 NC_012912.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; amidohydrolase; KEGG: spe:Spro_0515 phosphonate metabolism protein PhnM; phosphonate metabolism protein PhnM 3053259 8119130 Dd1591_2688 Dickeya zeae Ech1591 phosphonate metabolism protein PhnM YP_003004995.1 3052090 R 561229 CDS YP_003004996.1 251790275 8119131 complement(3053256..3053978) 1 NC_012912.1 KEGG: ypg:YpAngola_A4026 phosphonate ABC transporter ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL 3053978 8119131 Dd1591_2689 Dickeya zeae Ech1591 phosphonate C-P lyase system protein PhnL YP_003004996.1 3053256 R 561229 CDS YP_003004997.1 251790276 8119132 complement(3054003..3054824) 1 NC_012912.1 KEGG: spe:Spro_0517 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 3054824 phnK 8119132 phnK Dickeya zeae Ech1591 phosphonate C-P lyase system protein PhnK YP_003004997.1 3054003 R 561229 CDS YP_003004998.1 251790277 8119133 complement(3054811..3055665) 1 NC_012912.1 PFAM: phosphonate metabolism PhnJ; KEGG: yps:YPTB0513 protein in phn operon; phosphonate metabolism PhnJ 3055665 8119133 Dd1591_2691 Dickeya zeae Ech1591 phosphonate metabolism PhnJ YP_003004998.1 3054811 R 561229 CDS YP_003004999.1 251790278 8119134 complement(3055643..3056734) 1 NC_012912.1 PFAM: phosphonate metabolism; KEGG: spe:Spro_0519 phosphonate metabolism; phosphonate metabolism 3056734 8119134 Dd1591_2692 Dickeya zeae Ech1591 phosphonate metabolism YP_003004999.1 3055643 R 561229 CDS YP_003005000.1 251790279 8119135 complement(3056734..3057309) 1 NC_012912.1 TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: cko:CKO_03770 carbon-phosphorus lyase complex subunit; phosphonate C-P lyase system protein PhnH 3057309 8119135 Dd1591_2693 Dickeya zeae Ech1591 phosphonate C-P lyase system protein PhnH YP_003005000.1 3056734 R 561229 CDS YP_003005001.1 251790280 8119136 complement(3057306..3057755) 1 NC_012912.1 TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: spe:Spro_0521 phosphonate metabolism PhnG; phosphonate C-P lyase system protein PhnG 3057755 8119136 Dd1591_2694 Dickeya zeae Ech1591 phosphonate C-P lyase system protein PhnG YP_003005001.1 3057306 R 561229 CDS YP_003005002.1 251790281 8119137 complement(3057756..3058475) 1 NC_012912.1 may be involved in phosphonate uptake and biodegradation; phosphonate metabolism transcriptional regulator PhnF 3058475 8119137 Dd1591_2695 Dickeya zeae Ech1591 phosphonate metabolism transcriptional regulator PhnF YP_003005002.1 3057756 R 561229 CDS YP_003005003.1 251790282 8119138 3058919..3059398 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: plu:plu0404 hypothetical protein; Hcp1 family type VI secretion system effector 3059398 8119138 Dd1591_2696 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003005003.1 3058919 D 561229 CDS YP_003005004.1 251790283 8119139 complement(3059613..3060305) 1 NC_012912.1 KEGG: yps:YPTB1848 hypothetical protein; hypothetical protein 3060305 8119139 Dd1591_2697 Dickeya zeae Ech1591 hypothetical protein YP_003005004.1 3059613 R 561229 CDS YP_003005005.1 251790284 8119140 3060499..3060819 1 NC_012912.1 KEGG: esa:ESA_01406 hypothetical protein; hypothetical protein 3060819 8119140 Dd1591_2698 Dickeya zeae Ech1591 hypothetical protein YP_003005005.1 3060499 D 561229 CDS YP_003005006.1 251790285 8119141 complement(3060924..3062342) 1 NC_012912.1 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase 3062342 8119141 Dd1591_2699 Dickeya zeae Ech1591 putrescine--2-oxoglutarate aminotransferase YP_003005006.1 3060924 R 561229 CDS YP_003005007.1 251790286 8119142 complement(3062620..3064056) 1 NC_012912.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 3064056 8119142 Dd1591_2700 Dickeya zeae Ech1591 gamma-aminobutyraldehyde dehydrogenase YP_003005007.1 3062620 R 561229 CDS YP_003005008.1 251790287 8119143 3064919..3066280 1 NC_012912.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 3066280 8119143 Dd1591_2701 Dickeya zeae Ech1591 anaerobic C4-dicarboxylate transporter YP_003005008.1 3064919 D 561229 CDS YP_003005009.1 251790288 8119144 complement(3066469..3067458) 1 NC_012912.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; KEGG: bha:BH2703 hypothetical protein; oxidoreductase domain-containing protein 3067458 8119144 Dd1591_2702 Dickeya zeae Ech1591 oxidoreductase domain-containing protein YP_003005009.1 3066469 R 561229 CDS YP_003005010.1 251790289 8119146 complement(3067711..3069027) 1 NC_012912.1 PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA1520 glutamate/aspartate:proton symporter; sodium:dicarboxylate symporter 3069027 8119146 Dd1591_2704 Dickeya zeae Ech1591 sodium:dicarboxylate symporter YP_003005010.1 3067711 R 561229 CDS YP_003005011.1 251790290 8119147 complement(3069481..3070434) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1519 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein 3070434 8119147 Dd1591_2705 Dickeya zeae Ech1591 transcriptional regulator CysB-like protein YP_003005011.1 3069481 R 561229 CDS YP_003005012.1 251790291 8119148 complement(3070898..3071173) 1 NC_012912.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: pmr:PMI3583 hydrogenase formation protein; hydrogenase assembly chaperone HypC/HupF 3071173 8119148 Dd1591_2706 Dickeya zeae Ech1591 hydrogenase assembly chaperone HypC/HupF YP_003005012.1 3070898 R 561229 CDS YP_003005013.1 251790292 8119149 3071584..3072210 1 NC_012912.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE2798 hydrogenase-4 component A; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3072210 8119149 Dd1591_2707 Dickeya zeae Ech1591 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003005013.1 3071584 D 561229 CDS YP_003005014.1 251790293 8119150 3072207..3074246 1 NC_012912.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: yen:YE2799 hydrogenase 4 subunit B; hydrogenase 4 subunit B 3074246 8119150 Dd1591_2708 Dickeya zeae Ech1591 hydrogenase 4 subunit B YP_003005014.1 3072207 D 561229 CDS YP_003005015.1 251790294 8119151 3074259..3075206 1 NC_012912.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: yen:YE2800 hydrogenase-4 component C; respiratory-chain NADH dehydrogenase subunit 1 3075206 8119151 Dd1591_2709 Dickeya zeae Ech1591 respiratory-chain NADH dehydrogenase subunit 1 YP_003005015.1 3074259 D 561229 CDS YP_003005016.1 251790295 8119152 3075223..3076662 1 NC_012912.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: yen:YE2801 hydrogenase 4 subunit D; hydrogenase 4 subunit D 3076662 8119152 Dd1591_2710 Dickeya zeae Ech1591 hydrogenase 4 subunit D YP_003005016.1 3075223 D 561229 CDS YP_003005017.1 251790296 8119153 3076672..3077322 1 NC_012912.1 interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; hydrogenase 4 membrane subunit 3077322 hyfE 8119153 hyfE Dickeya zeae Ech1591 hydrogenase 4 membrane subunit YP_003005017.1 3076672 D 561229 CDS YP_003005018.1 251790297 8119154 3077328..3078989 1 NC_012912.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: yen:YE2803 hydrogenase 4 subunit F; hydrogenase 4 subunit F 3078989 8119154 Dd1591_2712 Dickeya zeae Ech1591 hydrogenase 4 subunit F YP_003005018.1 3077328 D 561229 CDS YP_003005019.1 251790298 8119155 3078982..3080709 1 NC_012912.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: pmr:PMI2522 hydrogenase-4 component G; NADH dehydrogenase (ubiquinone) 30 kDa subunit 3080709 8119155 Dd1591_2713 Dickeya zeae Ech1591 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_003005019.1 3078982 D 561229 CDS YP_003005020.1 251790299 8119156 3080720..3081289 1 NC_012912.1 probable electron transfer protein for hydrogenase 4; hydrogenase 4 is believed to be silent in E. coli under conditions tested so far; hydrogenase 4 subunit H 3081289 8119156 Dd1591_2714 Dickeya zeae Ech1591 hydrogenase 4 subunit H YP_003005020.1 3080720 D 561229 CDS YP_003005021.1 251790300 8119157 3081286..3082077 1 NC_012912.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: yen:YE2806 hydrogenase-4 component I; NADH ubiquinone oxidoreductase 20 kDa subunit 3082077 8119157 Dd1591_2715 Dickeya zeae Ech1591 NADH ubiquinone oxidoreductase 20 kDa subunit YP_003005021.1 3081286 D 561229 CDS YP_003005022.1 251790301 8119158 3082074..3082472 1 NC_012912.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: yen:YE2807 hydrogenase-4 component J; formate hydrogenlyase maturation HycH 3082472 8119158 Dd1591_2716 Dickeya zeae Ech1591 formate hydrogenlyase maturation HycH YP_003005022.1 3082074 D 561229 CDS YP_003005023.1 251790302 8119159 3082465..3082962 1 NC_012912.1 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease 3082962 hycI 8119159 hycI Dickeya zeae Ech1591 hydrogenase 3 maturation protease YP_003005023.1 3082465 D 561229 CDS YP_003005024.1 251790303 8119160 complement(3083062..3083550) 1 NC_012912.1 KEGG: mmw:Mmwyl1_0663 putative transcriptional regulator; putative addiction module antidote protein 3083550 8119160 Dd1591_2718 Dickeya zeae Ech1591 putative addiction module antidote protein YP_003005024.1 3083062 R 561229 CDS YP_003005025.1 251790304 8119161 complement(3083558..3083815) 1 NC_012912.1 KEGG: vco:VC0395_0747 hypothetical protein; hypothetical protein 3083815 8119161 Dd1591_2719 Dickeya zeae Ech1591 hypothetical protein YP_003005025.1 3083558 R 561229 CDS YP_003005026.1 251790305 8119162 3084329..3084871 1 NC_012912.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE2809 4Fe-4S ferrodoxin; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3084871 8119162 Dd1591_2720 Dickeya zeae Ech1591 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003005026.1 3084329 D 561229 CDS YP_003005027.1 251790306 8119163 3084906..3087056 1 NC_012912.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: yen:YE2810 formate dehydrogenase H; formate dehydrogenase subunit alpha 3087056 8119163 Dd1591_2721 Dickeya zeae Ech1591 formate dehydrogenase subunit alpha YP_003005027.1 3084906 D 561229 CDS YP_003005028.1 251790307 8119164 3087326..3088534 1 NC_012912.1 PFAM: AAA-4 family protein; KEGG: cja:CJA_1578 putative ATP-dependent DNA helicase; putative transcriptional regulator 3088534 8119164 Dd1591_2722 Dickeya zeae Ech1591 putative transcriptional regulator YP_003005028.1 3087326 D 561229 CDS YP_003005029.1 251790308 8119165 3088531..3089547 1 NC_012912.1 KEGG: aeh:Mlg_2299 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 3089547 8119165 Dd1591_2723 Dickeya zeae Ech1591 cobyrinic acid a,c-diamide synthase YP_003005029.1 3088531 D 561229 CDS YP_003005030.1 251790309 8119166 complement(3089630..3091801) 1 NC_012912.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; GAF domain protein; KEGG: yen:YE2811 putative hydrogenlyase transcriptional activator; NifA subfamily transcriptional regulator, Fis Family 3091801 8119166 Dd1591_2724 Dickeya zeae Ech1591 NifA subfamily transcriptional regulator, Fis Family YP_003005030.1 3089630 R 561229 CDS YP_003005031.1 251790310 8119167 3092724..3094013 1 NC_012912.1 PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA1503 proton glutamate symport protein; sodium:dicarboxylate symporter 3094013 8119167 Dd1591_2725 Dickeya zeae Ech1591 sodium:dicarboxylate symporter YP_003005031.1 3092724 D 561229 CDS YP_003005032.1 251790311 8119169 complement(3094463..3095104) 1 NC_012912.1 PFAM: regulatory protein TetR; HMG-I and HMG-Y DNA-binding domain protein; KEGG: pzu:PHZ_c3419 transcriptional regulator, TetR family; TetR family transcriptional regulator 3095104 8119169 Dd1591_2727 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003005032.1 3094463 R 561229 CDS YP_003005033.1 251790312 8119170 3095251..3096060 1 NC_012912.1 KEGG: nmu:Nmul_A0946 putative glutathione S-transferase; putative glutathione S-transferase 3096060 8119170 Dd1591_2728 Dickeya zeae Ech1591 putative glutathione S-transferase YP_003005033.1 3095251 D 561229 CDS YP_003005034.1 251790313 8119172 complement(3096383..3097276) 1 NC_012912.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA1501 LysR family transcriptional regulator; LysR family transcriptional regulator 3097276 8119172 Dd1591_2730 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005034.1 3096383 R 561229 CDS YP_003005035.1 251790314 8119173 3097385..3098143 1 NC_012912.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: eca:ECA1500 aspartate racemase; aspartate racemase 3098143 8119173 Dd1591_2731 Dickeya zeae Ech1591 aspartate racemase YP_003005035.1 3097385 D 561229 CDS YP_003005036.1 251790315 8119174 3098231..3099304 1 NC_012912.1 transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor 3099304 lacI 8119174 lacI Dickeya zeae Ech1591 lac repressor YP_003005036.1 3098231 D 561229 CDS YP_003005037.1 251790316 8119175 3099483..3102593 1 NC_012912.1 forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 3102593 lacZ 8119175 lacZ Dickeya zeae Ech1591 beta-D-galactosidase YP_003005037.1 3099483 D 561229 CDS YP_003005038.1 251790317 8119178 complement(3103683..3104066) 1 NC_012912.1 KEGG: xfa:XF1742 hypothetical protein; hypothetical protein 3104066 8119178 Dd1591_2735 Dickeya zeae Ech1591 hypothetical protein YP_003005038.1 3103683 R 561229 CDS YP_003005039.1 251790318 8119179 complement(3104198..3104965) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_1760 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3104965 8119179 Dd1591_2736 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005039.1 3104198 R 561229 CDS YP_003005040.1 251790319 8119180 complement(3104991..3106067) 1 NC_012912.1 KEGG: kpn:KPN_01707 hypothetical protein; hypothetical protein 3106067 8119180 Dd1591_2737 Dickeya zeae Ech1591 hypothetical protein YP_003005040.1 3104991 R 561229 CDS YP_003005041.1 251790320 8119741 complement(3106256..3107506) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl01_2475 major facilitator transporter; major facilitator superfamily protein 3107506 8119741 Dd1591_2738 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005041.1 3106256 R 561229 CDS YP_003005042.1 251790321 8119742 3107697..3108620 1 NC_012912.1 PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: kpn:KPN_01705 putative AraC-type regulatory protein; AraC family transcriptional regulator 3108620 8119742 Dd1591_2739 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003005042.1 3107697 D 561229 CDS YP_003005043.1 251790322 8119743 complement(3108703..3109314) 1 NC_012912.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: msu:MS2162 MdaB protein; NAD(P)H dehydrogenase (quinone) 3109314 8119743 Dd1591_2740 Dickeya zeae Ech1591 NAD(P)H dehydrogenase (quinone) YP_003005043.1 3108703 R 561229 CDS YP_003005044.1 251790323 8119744 3109739..3110911 1 NC_012912.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: abu:Abu_0783 zinc-containing NADP-dependent alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 3110911 8119744 Dd1591_2741 Dickeya zeae Ech1591 alcohol dehydrogenase GroES domain-containing protein YP_003005044.1 3109739 D 561229 CDS YP_003005045.1 251790324 8119745 complement(3111035..3111733) 1 NC_012912.1 KEGG: eca:ECA2148 putative ABC transport ATP-binding subunit; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 3111733 8119745 Dd1591_2742 Dickeya zeae Ech1591 urea ABC transporter ATP-binding protein UrtE YP_003005045.1 3111035 R 561229 CDS YP_003005046.1 251790325 8119746 complement(3111736..3112527) 1 NC_012912.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: spe:Spro_1424 ABC transporter-related protein; urea ABC transporter ATP-binding protein UrtD 3112527 8119746 Dd1591_2743 Dickeya zeae Ech1591 urea ABC transporter ATP-binding protein UrtD YP_003005046.1 3111736 R 561229 CDS YP_003005047.1 251790326 8119747 complement(3112520..3113596) 1 NC_012912.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: eca:ECA2146 putative branched-chain amino acid transport system, permease component; urea ABC transporter permease protein UrtC 3113596 8119747 Dd1591_2744 Dickeya zeae Ech1591 urea ABC transporter permease protein UrtC YP_003005047.1 3112520 R 561229 CDS YP_003005048.1 251790327 8119748 complement(3113596..3115173) 1 NC_012912.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: eca:ECA2145 putative branched-chain amino acid transport system, permease component; urea ABC transporter permease protein UrtB 3115173 8119748 Dd1591_2745 Dickeya zeae Ech1591 urea ABC transporter permease protein UrtB YP_003005048.1 3113596 R 561229 CDS YP_003005049.1 251790328 8119749 complement(3115282..3116553) 1 NC_012912.1 TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: esa:ESA_01770 hypothetical protein; urea ABC transporter urea binding protein 3116553 8119749 Dd1591_2746 Dickeya zeae Ech1591 urea ABC transporter urea binding protein YP_003005049.1 3115282 R 561229 CDS YP_003005050.1 251790329 8119750 complement(3116618..3117319) 1 NC_012912.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA2143 GntR family transcriptional regulator; GntR family transcriptional regulator 3117319 8119750 Dd1591_2747 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003005050.1 3116618 R 561229 CDS YP_003005051.1 251790330 8119751 complement(3117331..3120945) 1 NC_012912.1 KEGG: eca:ECA2142 UreA amidolyase; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; RimK domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase 3120945 8119751 Dd1591_2748 Dickeya zeae Ech1591 urea carboxylase YP_003005051.1 3117331 R 561229 CDS YP_003005052.1 251790331 8119752 complement(3120938..3122743) 1 NC_012912.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 3122743 8119752 Dd1591_2749 Dickeya zeae Ech1591 allophanate hydrolase YP_003005052.1 3120938 R 561229 CDS YP_003005053.1 251790332 8119753 3122847..3123116 1 NC_012912.1 hypothetical protein 3123116 8119753 Dd1591_2750 Dickeya zeae Ech1591 hypothetical protein YP_003005053.1 3122847 D 561229 CDS YP_003005054.1 251790333 8119754 complement(3123285..3123539) 1 NC_012912.1 KEGG: eca:ECA1472 hypothetical protein; hypothetical protein 3123539 8119754 Dd1591_2751 Dickeya zeae Ech1591 hypothetical protein YP_003005054.1 3123285 R 561229 CDS YP_003005055.1 251790334 8119755 complement(3123634..3123966) 1 NC_012912.1 PFAM: Protein of unknown function DUF1971; KEGG: eca:ECA1474 hypothetical protein; hypothetical protein 3123966 8119755 Dd1591_2752 Dickeya zeae Ech1591 hypothetical protein YP_003005055.1 3123634 R 561229 CDS YP_003005056.1 251790335 8119756 3124290..3124919 1 NC_012912.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: eca:ECA1475 hypothetical protein; flavin reductase domain-containing protein FMN-binding 3124919 8119756 Dd1591_2753 Dickeya zeae Ech1591 flavin reductase domain-containing protein FMN-binding YP_003005056.1 3124290 D 561229 CDS YP_003005057.1 251790336 8119757 complement(3125027..3125530) 1 NC_012912.1 KEGG: sew:SeSA_A4796 P-18 protein; P-18 protein 3125530 8119757 Dd1591_2754 Dickeya zeae Ech1591 P-18 protein YP_003005057.1 3125027 R 561229 CDS YP_003005058.1 251790337 8119758 complement(3125655..3126557) 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: yps:YPTB0599 AraC/XylS family transcription factor; AraC family transcriptional regulator 3126557 8119758 Dd1591_2755 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003005058.1 3125655 R 561229 CDS YP_003005059.1 251790338 8119759 complement(3126696..3127151) 1 NC_012912.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kpe:KPK_2661 transcriptional regulator, MarR family; MarR family transcriptional regulator 3127151 8119759 Dd1591_2756 Dickeya zeae Ech1591 MarR family transcriptional regulator YP_003005059.1 3126696 R 561229 CDS YP_003005060.1 251790339 8119760 complement(3127340..3128101) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH2078 oligopeptide ABC transporter ATP-binding protein; ABC transporter 3128101 8119760 Dd1591_2757 Dickeya zeae Ech1591 ABC transporter YP_003005060.1 3127340 R 561229 CDS YP_003005061.1 251790340 8119761 complement(3128105..3128917) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH2077 oligopeptide ABC transporter ATP-binding protein; ABC transporter 3128917 8119761 Dd1591_2758 Dickeya zeae Ech1591 ABC transporter YP_003005061.1 3128105 R 561229 CDS YP_003005062.1 251790341 8119762 complement(3128914..3129771) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmr:PMI2945 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 3129771 8119762 Dd1591_2759 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005062.1 3128914 R 561229 CDS YP_003005063.1 251790342 8119763 complement(3129768..3130703) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmr:PMI2946 ABC-transporter, permease protein; binding-protein-dependent transport systems inner membrane component 3130703 8119763 Dd1591_2760 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005063.1 3129768 R 561229 CDS YP_003005064.1 251790343 8119764 complement(3130769..3132343) 1 NC_012912.1 TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5; KEGG: pmr:PMI2947 ABC transporter. substrate-binding protein; nickel ABC transporter periplasmic nickel-binding protein 3132343 8119764 Dd1591_2761 Dickeya zeae Ech1591 nickel ABC transporter periplasmic nickel-binding protein YP_003005064.1 3130769 R 561229 CDS YP_003005065.1 251790344 8119765 complement(3132416..3133213) 1 NC_012912.1 PFAM: Methyltransferase type 11; NodS family protein; methyltransferase small; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: msu:MS0467 SmtA protein; type 11 methyltransferase 3133213 8119765 Dd1591_2762 Dickeya zeae Ech1591 type 11 methyltransferase YP_003005065.1 3132416 R 561229 CDS YP_003005066.1 251790345 8119766 3133779..3135977 1 NC_012912.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: hch:HCH_03207 catalase/peroxidase HPI; catalase/peroxidase HPI 3135977 8119766 Dd1591_2763 Dickeya zeae Ech1591 catalase/peroxidase HPI YP_003005066.1 3133779 D 561229 CDS YP_003005067.1 251790346 8119767 3136304..3136720 1 NC_012912.1 PFAM: LrgA family protein; KEGG: ses:SARI_00720 hypothetical protein; LrgA family protein 3136720 8119767 Dd1591_2764 Dickeya zeae Ech1591 LrgA family protein YP_003005067.1 3136304 D 561229 CDS YP_003005068.1 251790347 8119768 3136710..3137405 1 NC_012912.1 PFAM: LrgB family protein; KEGG: esa:ESA_01093 hypothetical protein; hypothetical protein 3137405 8119768 Dd1591_2765 Dickeya zeae Ech1591 hypothetical protein YP_003005068.1 3136710 D 561229 CDS YP_003005069.1 251790348 8119769 complement(3137433..3138230) 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A1171 AraC family transcriptional regulator; AraC family transcriptional regulator 3138230 8119769 Dd1591_2766 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003005069.1 3137433 R 561229 CDS YP_003005070.1 251790349 8119770 3138722..3139870 1 NC_012912.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane fatty acyl phospholipid synthase 3139870 8119770 Dd1591_2767 Dickeya zeae Ech1591 cyclopropane fatty acyl phospholipid synthase YP_003005070.1 3138722 D 561229 CDS YP_003005071.1 251790350 8119771 3139989..3140708 1 NC_012912.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: eca:ECA1920 hypothetical protein; hypothetical protein 3140708 8119771 Dd1591_2768 Dickeya zeae Ech1591 hypothetical protein YP_003005071.1 3139989 D 561229 CDS YP_003005072.1 251790351 8119772 3140718..3142145 1 NC_012912.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: cko:CKO_04246 hypothetical protein; iron-sulfur cluster binding protein 3142145 8119772 Dd1591_2769 Dickeya zeae Ech1591 iron-sulfur cluster binding protein YP_003005072.1 3140718 D 561229 CDS YP_003005073.1 251790352 8119773 3142145..3142840 1 NC_012912.1 PFAM: protein of unknown function DUF162; KEGG: eca:ECA1918 hypothetical protein; hypothetical protein 3142840 8119773 Dd1591_2770 Dickeya zeae Ech1591 hypothetical protein YP_003005073.1 3142145 D 561229 CDS YP_003005074.1 251790353 8119774 complement(3143275..3145011) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: esa:ESA_01129 hypothetical protein; ABC transporter 3145011 8119774 Dd1591_2771 Dickeya zeae Ech1591 ABC transporter YP_003005074.1 3143275 R 561229 CDS YP_003005075.1 251790354 8119775 complement(3145315..3146079) 1 NC_012912.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA3201 hypothetical protein; hypothetical protein 3146079 8119775 Dd1591_2772 Dickeya zeae Ech1591 hypothetical protein YP_003005075.1 3145315 R 561229 CDS YP_003005076.1 251790355 8119776 complement(3146138..3147262) 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_2525 integral membrane sensor signal transduction histidine kinase; histidine kinase 3147262 8119776 Dd1591_2773 Dickeya zeae Ech1591 histidine kinase YP_003005076.1 3146138 R 561229 CDS YP_003005077.1 251790356 8119777 complement(3147259..3147996) 1 NC_012912.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcj:BCAM0111 two-component regulatory system, response regulator protein; winged helix family two component transcriptional regulator 3147996 8119777 Dd1591_2774 Dickeya zeae Ech1591 winged helix family two component transcriptional regulator YP_003005077.1 3147259 R 561229 CDS YP_003005078.1 251790357 8119778 3148130..3149392 1 NC_012912.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bmj:BMULJ_04150 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 3149392 8119778 Dd1591_2775 Dickeya zeae Ech1591 RND family efflux transporter MFP subunit YP_003005078.1 3148130 D 561229 CDS YP_003005079.1 251790358 8119779 3149413..3152547 1 NC_012912.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSp0312 multidrug efflux system transmembrane protein; transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3152547 8119779 Dd1591_2776 Dickeya zeae Ech1591 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_003005079.1 3149413 D 561229 CDS YP_003005080.1 251790359 8119780 complement(3152961..3153827) 1 NC_012912.1 PFAM: N-acetyltransferase; KEGG: mxa:MXAN_1194 N-acetyltransferase family protein; N-acetyltransferase 3153827 8119780 Dd1591_2777 Dickeya zeae Ech1591 N-acetyltransferase YP_003005080.1 3152961 R 561229 CDS YP_003005081.1 251790360 8119781 3153928..3154095 1 NC_012912.1 hypothetical protein 3154095 8119781 Dd1591_2778 Dickeya zeae Ech1591 hypothetical protein YP_003005081.1 3153928 D 561229 CDS YP_003005082.1 251790361 8119782 3154229..3155143 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0003333 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 3155143 8119782 Dd1591_2779 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005082.1 3154229 D 561229 CDS YP_003005083.1 251790362 8119783 3155753..3157258 1 NC_012912.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; Osmosensory transporter coiled coil; major facilitator superfamily MFS_1; KEGG: eta:ETA_32990 proline/betaine transporter; proline/glycine betaine transporter 3157258 8119783 Dd1591_2780 Dickeya zeae Ech1591 proline/glycine betaine transporter YP_003005083.1 3155753 D 561229 CDS YP_003005084.1 251790363 8119784 complement(3157338..3157565) 1 NC_012912.1 PFAM: protein of unknown function DUF1272; KEGG: atc:AGR_C_4366 hypothetical protein; hypothetical protein 3157565 8119784 Dd1591_2781 Dickeya zeae Ech1591 hypothetical protein YP_003005084.1 3157338 R 561229 CDS YP_003005085.1 251790364 8119785 complement(3157608..3158921) 1 NC_012912.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: spe:Spro_2927 Dyp-type peroxidase family protein; Dyp-type peroxidase family 3158921 8119785 Dd1591_2782 Dickeya zeae Ech1591 Dyp-type peroxidase family YP_003005085.1 3157608 R 561229 CDS YP_003005086.1 251790365 8119786 complement(3158933..3160054) 1 NC_012912.1 KEGG: spe:Spro_2928 hypothetical protein; hypothetical protein 3160054 8119786 Dd1591_2783 Dickeya zeae Ech1591 hypothetical protein YP_003005086.1 3158933 R 561229 CDS YP_003005087.1 251790366 8119787 complement(3160081..3160926) 1 NC_012912.1 PFAM: iron permease FTR1; KEGG: spe:Spro_2929 iron permease FTR1; iron permease FTR1 3160926 8119787 Dd1591_2784 Dickeya zeae Ech1591 iron permease FTR1 YP_003005087.1 3160081 R 561229 CDS YP_003005088.1 251790367 8119788 complement(3161246..3162805) 1 NC_012912.1 KEGG: esa:ESA_01230 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3162805 8119788 Dd1591_2785 Dickeya zeae Ech1591 diguanylate cyclase YP_003005088.1 3161246 R 561229 CDS YP_003005089.1 251790368 8119789 3163649..3164638 1 NC_012912.1 PFAM: protein of unknown function DUF1611; KEGG: mes:Meso_0034 protein of unknown function DUF1611; hypothetical protein 3164638 8119789 Dd1591_2786 Dickeya zeae Ech1591 hypothetical protein YP_003005089.1 3163649 D 561229 CDS YP_003005090.1 251790369 8119790 3164648..3165658 1 NC_012912.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA3116 putative mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 3165658 8119790 Dd1591_2787 Dickeya zeae Ech1591 mandelate racemase/muconate lactonizing protein YP_003005090.1 3164648 D 561229 CDS YP_003005091.1 251790370 8119791 3165658..3166518 1 NC_012912.1 PFAM: aminotransferase class IV; KEGG: eca:ECA3117 D-alanine aminotransferase; aminotransferase class IV 3166518 8119791 Dd1591_2788 Dickeya zeae Ech1591 aminotransferase class IV YP_003005091.1 3165658 D 561229 CDS YP_003005092.1 251790371 8119792 complement(3166543..3167121) 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: eca:ECA0946 TetR family transcriptional regulator; TetR family transcriptional regulator 3167121 8119792 Dd1591_2789 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003005092.1 3166543 R 561229 CDS YP_003005093.1 251790372 8119793 3167239..3168117 1 NC_012912.1 KEGG: eca:ECA0947 hypothetical protein; hypothetical protein 3168117 8119793 Dd1591_2790 Dickeya zeae Ech1591 hypothetical protein YP_003005093.1 3167239 D 561229 CDS YP_003005094.1 251790373 8119794 complement(3168204..3169136) 1 NC_012912.1 hypothetical protein 3169136 8119794 Dd1591_2791 Dickeya zeae Ech1591 hypothetical protein YP_003005094.1 3168204 R 561229 CDS YP_003005095.1 251790374 8119795 complement(3169198..3170565) 1 NC_012912.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: eca:ECA3430 putative lipoprotein; Sel1 domain-containing protein repeat-containing protein 3170565 8119795 Dd1591_2792 Dickeya zeae Ech1591 Sel1 domain-containing protein repeat-containing protein YP_003005095.1 3169198 R 561229 CDS YP_003005096.1 251790375 8119796 complement(3170635..3172068) 1 NC_012912.1 PFAM: ImpA domain protein; KEGG: eca:ECA3431 hypothetical protein; ImpA domain-containing protein 3172068 8119796 Dd1591_2793 Dickeya zeae Ech1591 ImpA domain-containing protein YP_003005096.1 3170635 R 561229 CDS YP_003005097.1 251790376 8119797 complement(3172120..3175617) 1 NC_012912.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: eca:ECA3432 putative virulence-associated protein; type VI secretion protein IcmF 3175617 8119797 Dd1591_2794 Dickeya zeae Ech1591 type VI secretion protein IcmF YP_003005097.1 3172120 R 561229 CDS YP_003005098.1 251790377 8119798 complement(3175643..3177082) 1 NC_012912.1 TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: eca:ECA3433 hypothetical protein; type VI secretion-associated protein 3177082 8119798 Dd1591_2795 Dickeya zeae Ech1591 type VI secretion-associated protein YP_003005098.1 3175643 R 561229 CDS YP_003005099.1 251790378 8119799 complement(3177094..3177657) 1 NC_012912.1 TIGRFAM: type VI secretion-associated protein, VC_A0118 family; KEGG: eca:ECA3434 hypothetical protein; type VI secretion-associated protein 3177657 8119799 Dd1591_2796 Dickeya zeae Ech1591 type VI secretion-associated protein YP_003005099.1 3177094 R 561229 CDS YP_003005100.1 251790379 8119800 complement(3177657..3179195) 1 NC_012912.1 PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: eca:ECA3435 putative sigma-54 dependent transcriptional regulator; putative sigma54 specific transcriptional regulator 3179195 8119800 Dd1591_2797 Dickeya zeae Ech1591 putative sigma54 specific transcriptional regulator YP_003005100.1 3177657 R 561229 CDS YP_003005101.1 251790380 8119801 complement(3179198..3181816) 1 NC_012912.1 KEGG: eca:ECA3436 putative chaperone; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 3181816 8119801 Dd1591_2798 Dickeya zeae Ech1591 type VI secretion ATPase, ClpV1 family YP_003005101.1 3179198 R 561229 CDS YP_003005102.1 251790381 8119802 complement(3181832..3182608) 1 NC_012912.1 TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: eca:ECA3437 hypothetical protein; type IV / VI secretion system protein, DotU family 3182608 8119802 Dd1591_2799 Dickeya zeae Ech1591 type IV / VI secretion system protein, DotU family YP_003005102.1 3181832 R 561229 CDS YP_003005103.1 251790382 8119803 complement(3182625..3183962) 1 NC_012912.1 TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: eca:ECA3438 hypothetical protein; type VI secretion protein 3183962 8119803 Dd1591_2800 Dickeya zeae Ech1591 type VI secretion protein YP_003005103.1 3182625 R 561229 CDS YP_003005104.1 251790383 8119804 complement(3183965..3184501) 1 NC_012912.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: eca:ECA3439 putative lipoprotein; type VI secretion lipoprotein, VC_A0113 family 3184501 8119804 Dd1591_2801 Dickeya zeae Ech1591 type VI secretion lipoprotein, VC_A0113 family YP_003005104.1 3183965 R 561229 CDS YP_003005105.1 251790384 8119805 complement(3184501..3185730) 1 NC_012912.1 TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: eca:ECA3440 hypothetical protein; FHA domain-containing protein 3185730 8119805 Dd1591_2802 Dickeya zeae Ech1591 FHA domain-containing protein YP_003005105.1 3184501 R 561229 CDS YP_003005106.1 251790385 8119806 complement(3185733..3186746) 1 NC_012912.1 TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: eca:ECA3441 hypothetical protein; type VI secretion protein 3186746 8119806 Dd1591_2803 Dickeya zeae Ech1591 type VI secretion protein YP_003005106.1 3185733 R 561229 CDS YP_003005107.1 251790386 8119807 complement(3186710..3188476) 1 NC_012912.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: eca:ECA3442 hypothetical protein; type VI secretion protein 3188476 8119807 Dd1591_2804 Dickeya zeae Ech1591 type VI secretion protein YP_003005107.1 3186710 R 561229 CDS YP_003005108.1 251790387 8119808 complement(3188479..3188910) 1 NC_012912.1 TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: eca:ECA3443 hypothetical protein; type VI secretion system lysozyme-related protein 3188910 8119808 Dd1591_2805 Dickeya zeae Ech1591 type VI secretion system lysozyme-related protein YP_003005108.1 3188479 R 561229 CDS YP_003005109.1 251790388 8119809 complement(3188917..3190395) 1 NC_012912.1 TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: eca:ECA3444 hypothetical protein; EvpB/VC_A0108 family type VI secretion protein 3190395 8119809 Dd1591_2806 Dickeya zeae Ech1591 EvpB/VC_A0108 family type VI secretion protein YP_003005109.1 3188917 R 561229 CDS YP_003005110.1 251790389 8119810 complement(3190427..3190930) 1 NC_012912.1 TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: eca:ECA3445 hypothetical protein; type VI secretion protein 3190930 8119810 Dd1591_2807 Dickeya zeae Ech1591 type VI secretion protein YP_003005110.1 3190427 R 561229 CDS YP_003005111.1 251790390 8119811 complement(3192025..3193182) 1 NC_012912.1 KEGG: kpe:KPK_2239 amidohydrolase family protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3193182 8119811 Dd1591_2808 Dickeya zeae Ech1591 amidohydrolase YP_003005111.1 3192025 R 561229 CDS YP_003005112.1 251790391 8119812 3193420..3193872 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA3419 hypothetical protein; hypothetical protein 3193872 8119812 Dd1591_2809 Dickeya zeae Ech1591 hypothetical protein YP_003005112.1 3193420 D 561229 CDS YP_003005113.1 251790392 8119813 complement(3193948..3194268) 1 NC_012912.1 KEGG: bvi:Bcep1808_0453 hypothetical protein; hypothetical protein 3194268 8119813 Dd1591_2810 Dickeya zeae Ech1591 hypothetical protein YP_003005113.1 3193948 R 561229 CDS YP_003005114.1 251790393 8119815 complement(3194554..3195006) 1 NC_012912.1 hypothetical protein 3195006 8119815 Dd1591_2812 Dickeya zeae Ech1591 hypothetical protein YP_003005114.1 3194554 R 561229 CDS YP_003005115.1 251790394 8119816 complement(3194991..3200012) 1 NC_012912.1 TIGRFAM: YD repeat protein; KEGG: eca:ECA3421 rhs protein; YD repeat protein 3200012 8119816 Dd1591_2813 Dickeya zeae Ech1591 YD repeat protein YP_003005115.1 3194991 R 561229 CDS YP_003005116.1 251790395 8119817 3200299..3200685 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ypi:YpsIP31758_0337 DNA-binding protein; XRE family transcriptional regulator 3200685 8119817 Dd1591_2814 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003005116.1 3200299 D 561229 CDS YP_003005117.1 251790396 8119818 3200769..3201098 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA3392 hypothetical protein; hypothetical protein 3201098 8119818 Dd1591_2815 Dickeya zeae Ech1591 hypothetical protein YP_003005117.1 3200769 D 561229 CDS YP_003005118.1 251790397 8119819 3201095..3201445 1 NC_012912.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA3419 hypothetical protein; hypothetical protein 3201445 8119819 Dd1591_2816 Dickeya zeae Ech1591 hypothetical protein YP_003005118.1 3201095 D 561229 CDS YP_003005119.1 251790398 8119820 complement(3201507..3201854) 1 NC_012912.1 KEGG: plu:plu3119 hypothetical protein; hypothetical protein 3201854 8119820 Dd1591_2817 Dickeya zeae Ech1591 hypothetical protein YP_003005119.1 3201507 R 561229 CDS YP_003005120.1 251790399 8120514 complement(3201865..3206904) 1 NC_012912.1 TIGRFAM: YD repeat protein; KEGG: eca:ECA3421 rhs protein; YD repeat protein 3206904 8120514 Dd1591_2818 Dickeya zeae Ech1591 YD repeat protein YP_003005120.1 3201865 R 561229 CDS YP_003005121.1 251790400 8120515 complement(3206922..3207839) 1 NC_012912.1 KEGG: eca:ECA3422 hypothetical protein; hypothetical protein 3207839 8120515 Dd1591_2819 Dickeya zeae Ech1591 hypothetical protein YP_003005121.1 3206922 R 561229 CDS YP_003005122.1 251790401 8120516 complement(3207836..3208822) 1 NC_012912.1 KEGG: eca:ECA3423 hypothetical protein; hypothetical protein 3208822 8120516 Dd1591_2820 Dickeya zeae Ech1591 hypothetical protein YP_003005122.1 3207836 R 561229 CDS YP_003005123.1 251790402 8120517 complement(3208951..3209715) 1 NC_012912.1 SMART: Ankyrin; KEGG: eca:ECA3424 putative lipoprotein; ankyrin 3209715 8120517 Dd1591_2821 Dickeya zeae Ech1591 ankyrin YP_003005123.1 3208951 R 561229 CDS YP_003005124.1 251790403 8120518 complement(3209712..3210479) 1 NC_012912.1 PFAM: Ankyrin; SMART: Ankyrin; KEGG: eca:ECA3424 putative lipoprotein; ankyrin 3210479 8120518 Dd1591_2822 Dickeya zeae Ech1591 ankyrin YP_003005124.1 3209712 R 561229 CDS YP_003005125.1 251790404 8120519 complement(3210476..3211255) 1 NC_012912.1 PFAM: Ankyrin; SMART: Ankyrin; KEGG: eca:ECA3425 putative lipoprotein; ankyrin 3211255 8120519 Dd1591_2823 Dickeya zeae Ech1591 ankyrin YP_003005125.1 3210476 R 561229 CDS YP_003005126.1 251790405 8120520 complement(3211255..3212625) 1 NC_012912.1 PFAM: PAAR repeat-containing protein; KEGG: eca:ECA3426 putative phospholipase; PAAR repeat-containing protein 3212625 8120520 Dd1591_2824 Dickeya zeae Ech1591 PAAR repeat-containing protein YP_003005126.1 3211255 R 561229 CDS YP_003005127.1 251790406 8120521 complement(3212635..3214671) 1 NC_012912.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA3427 hypothetical protein; type VI secretion system Vgr family protein 3214671 8120521 Dd1591_2825 Dickeya zeae Ech1591 type VI secretion system Vgr family protein YP_003005127.1 3212635 R 561229 CDS YP_003005128.1 251790407 8120522 complement(3214837..3215355) 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein; Hcp1 family type VI secretion system effector 3215355 8120522 Dd1591_2826 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003005128.1 3214837 R 561229 CDS YP_003005129.1 251790408 8120523 3215848..3217305 1 NC_012912.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 3217305 8120523 Dd1591_2827 Dickeya zeae Ech1591 AMP nucleosidase YP_003005129.1 3215848 D 561229 CDS YP_003005130.1 251790409 8120524 complement(3217388..3217723) 1 NC_012912.1 KEGG: eca:ECA3371 hypothetical protein; hypothetical protein 3217723 8120524 Dd1591_2828 Dickeya zeae Ech1591 hypothetical protein YP_003005130.1 3217388 R 561229 CDS YP_003005131.1 251790410 8120525 3218182..3218667 1 NC_012912.1 PFAM: Ferritin Dps family protein; KEGG: spe:Spro_2688 ferritin Dps family protein; Ferritin Dps family protein 3218667 8120525 Dd1591_2829 Dickeya zeae Ech1591 Ferritin Dps family protein YP_003005131.1 3218182 D 561229 CDS YP_003005132.1 251790411 8120526 complement(3218776..3219918) 1 NC_012912.1 KEGG: eca:ECA3507 hypothetical protein; 6-phosphogluconolactonase 3219918 8120526 Dd1591_2830 Dickeya zeae Ech1591 6-phosphogluconolactonase YP_003005132.1 3218776 R 561229 CDS YP_003005133.1 251790412 8120527 complement(3220113..3222539) 1 NC_012912.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: kpe:KPK_1035 TonB-dependent receptor; TonB-dependent receptor 3222539 8120527 Dd1591_2831 Dickeya zeae Ech1591 TonB-dependent receptor YP_003005133.1 3220113 R 561229 CDS YP_003005134.1 251790413 8120528 complement(3222739..3223533) 1 NC_012912.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 3223533 hmuV 8120528 hmuV Dickeya zeae Ech1591 hemin importer ATP-binding subunit YP_003005134.1 3222739 R 561229 CDS YP_003005135.1 251790414 8120529 complement(3223526..3224515) 1 NC_012912.1 PFAM: transport system permease protein; KEGG: sgl:SG1539 hemin ABC transporter permease component; transport system permease protein 3224515 8120529 Dd1591_2833 Dickeya zeae Ech1591 transport system permease protein YP_003005135.1 3223526 R 561229 CDS YP_003005136.1 251790415 8120530 complement(3224512..3225327) 1 NC_012912.1 PFAM: periplasmic binding protein; KEGG: yps:YPTB0338 ABC transporter, periplasmic hemin-binding protein HmuT; periplasmic binding protein 3225327 8120530 Dd1591_2834 Dickeya zeae Ech1591 periplasmic binding protein YP_003005136.1 3224512 R 561229 CDS YP_003005137.1 251790416 8120531 complement(3225324..3226355) 1 NC_012912.1 PFAM: Haemin-degrading family protein; KEGG: ecf:ECH74115_4856 hemin transport protein HmuS; Hemin-degrading family protein 3226355 8120531 Dd1591_2835 Dickeya zeae Ech1591 Hemin-degrading family protein YP_003005137.1 3225324 R 561229 CDS YP_003005138.1 251790417 8120532 complement(3226598..3226702) 1 NC_012912.1 hypothetical protein 3226702 8120532 Dd1591_2836 Dickeya zeae Ech1591 hypothetical protein YP_003005138.1 3226598 R 561229 CDS YP_003005139.1 251790418 8120533 3227419..3228369 1 NC_012912.1 PFAM: protein of unknown function DUF535; KEGG: eta:ETA_30810 putative virulence protein; hypothetical protein 3228369 8120533 Dd1591_2837 Dickeya zeae Ech1591 hypothetical protein YP_003005139.1 3227419 D 561229 CDS YP_003005140.1 251790419 8120534 complement(3228407..3229168) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pag:PLES_39431 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3229168 8120534 Dd1591_2838 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005140.1 3228407 R 561229 CDS YP_003005141.1 251790420 8120536 3230370..3231266 1 NC_012912.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA1505 hypothetical protein; GntR family transcriptional regulator 3231266 8120536 Dd1591_2840 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003005141.1 3230370 D 561229 CDS YP_003005142.1 251790421 8120537 complement(3231292..3232806) 1 NC_012912.1 hypothetical protein 3232806 8120537 Dd1591_2841 Dickeya zeae Ech1591 hypothetical protein YP_003005142.1 3231292 R 561229 CDS YP_003005143.1 251790422 8120538 3233205..3234467 1 NC_012912.1 hypothetical protein 3234467 8120538 Dd1591_2842 Dickeya zeae Ech1591 hypothetical protein YP_003005143.1 3233205 D 561229 CDS YP_003005144.1 251790423 8120539 complement(3234571..3236715) 1 NC_012912.1 PFAM: protein of unknown function DUF940 membrane lipoprotein putative; KEGG: eca:ECA1448 hypothetical protein; hypothetical protein 3236715 8120539 Dd1591_2843 Dickeya zeae Ech1591 hypothetical protein YP_003005144.1 3234571 R 561229 CDS YP_003005145.1 251790424 8120540 complement(3236715..3237494) 1 NC_012912.1 PFAM: protein of unknown function DUF1017; KEGG: eca:ECA1447 hypothetical protein; hypothetical protein 3237494 8120540 Dd1591_2844 Dickeya zeae Ech1591 hypothetical protein YP_003005145.1 3236715 R 561229 CDS YP_003005146.1 251790425 8120541 complement(3237504..3238178) 1 NC_012912.1 KEGG: eca:ECA1446 putative lipoprotein; putative lipoprotein 3238178 8120541 Dd1591_2845 Dickeya zeae Ech1591 putative lipoprotein YP_003005146.1 3237504 R 561229 CDS YP_003005147.1 251790426 8120542 complement(3238252..3238497) 1 NC_012912.1 hypothetical protein 3238497 8120542 Dd1591_2846 Dickeya zeae Ech1591 hypothetical protein YP_003005147.1 3238252 R 561229 CDS YP_003005148.1 251790427 8120543 complement(3239069..3240475) 1 NC_012912.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 3240475 8120543 Dd1591_2847 Dickeya zeae Ech1591 6-phosphogluconate dehydrogenase YP_003005148.1 3239069 R 561229 CDS YP_003005149.1 251790428 8120544 complement(3240754..3241653) 1 NC_012912.1 PFAM: Nucleotidyl transferase; KEGG: eca:ECA1443 UTP--glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase 3241653 8120544 Dd1591_2848 Dickeya zeae Ech1591 UTP--glucose-1-phosphate uridylyltransferase YP_003005149.1 3240754 R 561229 CDS YP_003005150.1 251790429 8120545 complement(3241737..3242903) 1 NC_012912.1 KEGG: aha:AHA_2880 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; nucleotide sugar dehydrogenase 3242903 8120545 Dd1591_2849 Dickeya zeae Ech1591 nucleotide sugar dehydrogenase YP_003005150.1 3241737 R 561229 CDS YP_003005151.1 251790430 8120546 complement(3243100..3244107) 1 NC_012912.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: aha:AHA_2881 nucleotide sugar epimerase; NAD-dependent epimerase/dehydratase 3244107 8120546 Dd1591_2850 Dickeya zeae Ech1591 NAD-dependent epimerase/dehydratase YP_003005151.1 3243100 R 561229 CDS YP_003005152.1 251790431 8120547 complement(3244214..3245587) 1 NC_012912.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; KEGG: ecr:ECIAI1_2103 phosphomannomutase (PMM); Phosphomannomutase 3245587 8120547 Dd1591_2851 Dickeya zeae Ech1591 Phosphomannomutase YP_003005152.1 3244214 R 561229 CDS YP_003005153.1 251790432 8120548 complement(3245602..3247032) 1 NC_012912.1 KEGG: spe:Spro_1599 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3247032 8120548 Dd1591_2852 Dickeya zeae Ech1591 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_003005153.1 3245602 R 561229 CDS YP_003005154.1 251790433 8120549 complement(3247387..3248223) 1 NC_012912.1 KEGG: kpn:KPN_02505 glycosyltransferase; glycosyltransferase 3248223 8120549 Dd1591_2853 Dickeya zeae Ech1591 glycosyltransferase YP_003005154.1 3247387 R 561229 CDS YP_003005155.1 251790434 8120550 complement(3248400..3249671) 1 NC_012912.1 PFAM: polysaccharide biosynthesis protein; KEGG: aci:ACIAD0075 putative polysaccharide transport protein; polysaccharide biosynthesis protein 3249671 8120550 Dd1591_2854 Dickeya zeae Ech1591 polysaccharide biosynthesis protein YP_003005155.1 3248400 R 561229 CDS YP_003005156.1 251790435 8120551 complement(3249668..3250588) 1 NC_012912.1 PFAM: glycosyl transferase family 2; KEGG: aci:ACIAD0074 glycosyl transferase family protein; glycosyl transferase family 2 3250588 8120551 Dd1591_2855 Dickeya zeae Ech1591 glycosyl transferase family 2 YP_003005156.1 3249668 R 561229 CDS YP_003005157.1 251790436 8120552 complement(3250668..3251525) 1 NC_012912.1 KEGG: eca:ECA1440 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase 3251525 8120552 Dd1591_2856 Dickeya zeae Ech1591 dTDP-4-dehydrorhamnose reductase YP_003005157.1 3250668 R 561229 CDS YP_003005158.1 251790437 8120553 complement(3251522..3252058) 1 NC_012912.1 KEGG: eca:ECA1441 dTDP-6-deoxy-D-glucose-3,5 epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 3252058 8120553 Dd1591_2857 Dickeya zeae Ech1591 dTDP-4-dehydrorhamnose 3,5-epimerase YP_003005158.1 3251522 R 561229 CDS YP_003005159.1 251790438 8120554 complement(3252060..3252929) 1 NC_012912.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: eca:ECA1442 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3252929 8120554 Dd1591_2858 Dickeya zeae Ech1591 glucose-1-phosphate thymidylyltransferase YP_003005159.1 3252060 R 561229 CDS YP_003005160.1 251790439 8120555 complement(3252955..3254019) 1 NC_012912.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: spe:Spro_0165 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 3254019 8120555 Dd1591_2859 Dickeya zeae Ech1591 dTDP-glucose 4,6-dehydratase YP_003005160.1 3252955 R 561229 CDS YP_003005161.1 251790440 8120556 complement(3254044..3255450) 1 NC_012912.1 WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; putative UDP-glucose lipid carrier transferase 3255450 8120556 Dd1591_2860 Dickeya zeae Ech1591 putative UDP-glucose lipid carrier transferase YP_003005161.1 3254044 R 561229 CDS YP_003005162.1 251790441 8120557 complement(3255476..3256393) 1 NC_012912.1 PFAM: glycosyl transferase family 2; KEGG: ecx:EcHS_A2189 glycosyl transferase, group 2 family protein; glycosyl transferase family 2 3256393 8120557 Dd1591_2861 Dickeya zeae Ech1591 glycosyl transferase family 2 YP_003005162.1 3255476 R 561229 CDS YP_003005163.1 251790442 8120558 complement(3256457..3257488) 1 NC_012912.1 PFAM: glycosyl transferase group 1; KEGG: aci:ACIAD0084 mannosyl transferase; glycosyl transferase group 1 3257488 8120558 Dd1591_2862 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003005163.1 3256457 R 561229 CDS YP_003005164.1 251790443 8120559 complement(3257590..3258792) 1 NC_012912.1 PFAM: glycosyl transferase group 1; KEGG: kpe:KPK_1659 glycosyl transferase, group 1 family protein; glycosyl transferase group 1 3258792 8120559 Dd1591_2863 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003005164.1 3257590 R 561229 CDS YP_003005165.1 251790444 8120560 complement(3259094..3260242) 1 NC_012912.1 PFAM: glycosyl transferase group 1; KEGG: kpe:KPK_1659 glycosyl transferase, group 1 family protein; glycosyl transferase group 1 3260242 8120560 Dd1591_2864 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003005165.1 3259094 R 561229 CDS YP_003005166.1 251790445 8120561 complement(3260429..3262600) 1 NC_012912.1 Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); tyrosine kinase 3262600 8120561 Dd1591_2865 Dickeya zeae Ech1591 tyrosine kinase YP_003005166.1 3260429 R 561229 CDS YP_003005167.1 251790446 8120562 complement(3262617..3263051) 1 NC_012912.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: eca:ECA1418 protein-tyrosine-phosphatase; protein tyrosine phosphatase 3263051 8120562 Dd1591_2866 Dickeya zeae Ech1591 protein tyrosine phosphatase YP_003005167.1 3262617 R 561229 CDS YP_003005168.1 251790447 8120563 complement(3263071..3264207) 1 NC_012912.1 PFAM: polysaccharide export protein; KEGG: eca:ECA1417 putative polysaccharide export protein; polysaccharide export protein 3264207 8120563 Dd1591_2867 Dickeya zeae Ech1591 polysaccharide export protein YP_003005168.1 3263071 R 561229 CDS YP_003005169.1 251790448 8120564 3265580..3267169 1 NC_012912.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: spe:Spro_1580 integral membrane protein TerC; Integral membrane protein TerC 3267169 8120564 Dd1591_2868 Dickeya zeae Ech1591 Integral membrane protein TerC YP_003005169.1 3265580 D 561229 CDS YP_003005170.1 251790449 8120565 complement(3267677..3269491) 1 NC_012912.1 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; putative assembly protein 3269491 8120565 Dd1591_2869 Dickeya zeae Ech1591 putative assembly protein YP_003005170.1 3267677 R 561229 CDS YP_003005171.1 251790450 8120566 complement(3269524..3270105) 1 NC_012912.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 3270105 dcd 8120566 dcd Dickeya zeae Ech1591 deoxycytidine triphosphate deaminase YP_003005171.1 3269524 R 561229 CDS YP_003005172.1 251790451 8120567 complement(3270209..3270850) 1 NC_012912.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 3270850 8120567 Dd1591_2871 Dickeya zeae Ech1591 uridine kinase YP_003005172.1 3270209 R 561229 CDS YP_003005173.1 251790452 8120568 complement(3271136..3272245) 1 NC_012912.1 KEGG: eca:ECA1410 putative ATPase; putative ATPase 3272245 8120568 Dd1591_2872 Dickeya zeae Ech1591 putative ATPase YP_003005173.1 3271136 R 561229 CDS YP_003005174.1 251790453 8120569 3272525..3274558 1 NC_012912.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3274558 metG 8120569 metG Dickeya zeae Ech1591 methionyl-tRNA synthetase YP_003005174.1 3272525 D 561229 CDS YP_003005175.1 251790454 8120570 3274673..3275998 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 3275998 8120570 Dd1591_2874 Dickeya zeae Ech1591 transposase IS4 family protein YP_003005175.1 3274673 D 561229 CDS YP_003005176.1 251790455 8120571 3276285..3276716 1 NC_012912.1 PFAM: VirK family protein; KEGG: xac:XAC0435 VirK protein; VirK family protein 3276716 8120571 Dd1591_2875 Dickeya zeae Ech1591 VirK family protein YP_003005176.1 3276285 D 561229 CDS YP_003005177.1 251790456 8120572 3276956..3278032 1 NC_012912.1 KEGG: eca:ECA1405 hypothetical protein; hypothetical protein 3278032 8120572 Dd1591_2876 Dickeya zeae Ech1591 hypothetical protein YP_003005177.1 3276956 D 561229 CDS YP_003005178.1 251790457 8120573 3278057..3279307 1 NC_012912.1 KEGG: eca:ECA1404 hypothetical protein; hypothetical protein 3279307 8120573 Dd1591_2877 Dickeya zeae Ech1591 hypothetical protein YP_003005178.1 3278057 D 561229 CDS YP_003005179.1 251790458 8120574 complement(3279376..3280371) 1 NC_012912.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 3280371 8120574 Dd1591_2878 Dickeya zeae Ech1591 6-phosphogluconolactonase YP_003005179.1 3279376 R 561229 CDS YP_003005180.1 251790459 8120575 3280552..3281373 1 NC_012912.1 YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase 3281373 8120575 Dd1591_2879 Dickeya zeae Ech1591 phosphotransferase YP_003005180.1 3280552 D 561229 CDS YP_003005181.1 251790460 8120576 complement(3281423..3282481) 1 NC_012912.1 Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 3282481 modC 8120576 modC Dickeya zeae Ech1591 molybdate transporter ATP-binding protein YP_003005181.1 3281423 R 561229 CDS YP_003005182.1 251790461 8120577 complement(3282481..3283170) 1 NC_012912.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1394 molybdate ABC transporter permease protein; molybdate ABC transporter inner membrane subunit 3283170 8120577 Dd1591_2881 Dickeya zeae Ech1591 molybdate ABC transporter inner membrane subunit YP_003005182.1 3282481 R 561229 CDS YP_003005183.1 251790462 8120578 complement(3283157..3283942) 1 NC_012912.1 with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 3283942 modA 8120578 modA Dickeya zeae Ech1591 molybdate transporter periplasmic protein YP_003005183.1 3283157 R 561229 CDS YP_003005184.1 251790463 8120579 complement(3284077..3284226) 1 NC_012912.1 KEGG: kpe:KPK_3803 hypothetical protein; hypothetical protein 3284226 8120579 Dd1591_2883 Dickeya zeae Ech1591 hypothetical protein YP_003005184.1 3284077 R 561229 CDS YP_003005185.1 251790464 8120580 3284423..3285232 1 NC_012912.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE 3285232 8120580 Dd1591_2884 Dickeya zeae Ech1591 DNA-binding transcriptional regulator ModE YP_003005185.1 3284423 D 561229 CDS YP_003005186.1 251790465 8120581 3285315..3286784 1 NC_012912.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; putative molybdenum transport ATP-binding protein ModF 3286784 8120581 Dd1591_2885 Dickeya zeae Ech1591 putative molybdenum transport ATP-binding protein ModF YP_003005186.1 3285315 D 561229 CDS YP_003005187.1 251790466 8120582 3287042..3288058 1 NC_012912.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: eca:ECA1389 UDP-galactose-4-epimerase; UDP-galactose-4-epimerase 3288058 8120582 Dd1591_2886 Dickeya zeae Ech1591 UDP-galactose-4-epimerase YP_003005187.1 3287042 D 561229 CDS YP_003005188.1 251790467 8120583 3288155..3289243 1 NC_012912.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 3289243 8120583 Dd1591_2887 Dickeya zeae Ech1591 galactose-1-phosphate uridylyltransferase YP_003005188.1 3288155 D 561229 CDS YP_003005189.1 251790468 8120584 3289240..3290391 1 NC_012912.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: spe:Spro_1291 galactokinase; galactokinase 3290391 8120584 Dd1591_2888 Dickeya zeae Ech1591 galactokinase YP_003005189.1 3289240 D 561229 CDS YP_003005190.1 251790469 8120585 3290381..3291451 1 NC_012912.1 catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase 3291451 galM 8120585 galM Dickeya zeae Ech1591 aldose 1-epimerase YP_003005190.1 3290381 D 561229 CDS YP_003005191.1 251790470 8120586 3291572..3292015 1 NC_012912.1 KEGG: eca:ECA1387 hypothetical protein; hypothetical protein 3292015 8120586 Dd1591_2890 Dickeya zeae Ech1591 hypothetical protein YP_003005191.1 3291572 D 561229 CDS YP_003005192.1 251790471 8120587 3292088..3292498 1 NC_012912.1 KEGG: eca:ECA1386 hypothetical protein; hypothetical protein 3292498 8120587 Dd1591_2891 Dickeya zeae Ech1591 hypothetical protein YP_003005192.1 3292088 D 561229 CDS YP_003005193.1 251790472 8120588 3292511..3293770 1 NC_012912.1 PFAM: outer membrane efflux protein; KEGG: eca:ECA1385 hypothetical protein; outer membrane efflux protein 3293770 8120588 Dd1591_2892 Dickeya zeae Ech1591 outer membrane efflux protein YP_003005193.1 3292511 D 561229 CDS YP_003005194.1 251790473 8120589 3293767..3295290 1 NC_012912.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: eca:ECA1384 putative copper efflux system protein; RND family efflux transporter MFP subunit 3295290 8120589 Dd1591_2893 Dickeya zeae Ech1591 RND family efflux transporter MFP subunit YP_003005194.1 3293767 D 561229 CDS YP_003005195.1 251790474 8120590 3295287..3298424 1 NC_012912.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: eca:ECA1383 cation efflux system protein; heavy metal efflux pump, CzcA family 3298424 8120590 Dd1591_2894 Dickeya zeae Ech1591 heavy metal efflux pump, CzcA family YP_003005195.1 3295287 D 561229 CDS YP_003005196.1 251790475 8120591 3298568..3299320 1 NC_012912.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 3299320 gpmA 8120591 gpmA Dickeya zeae Ech1591 phosphoglyceromutase YP_003005196.1 3298568 D 561229 CDS YP_003005197.1 251790476 8120592 complement(3299419..3300471) 1 NC_012912.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3300471 8120592 Dd1591_2896 Dickeya zeae Ech1591 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003005197.1 3299419 R 561229 CDS YP_003005198.1 251790477 8120593 complement(3300757..3301482) 1 NC_012912.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: spe:Spro_1283 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 3301482 8120593 Dd1591_2897 Dickeya zeae Ech1591 nicotinamide mononucleotide transporter PnuC YP_003005198.1 3300757 R 561229 CDS YP_003005199.1 251790478 8118307 complement(3301504..3302553) 1 NC_012912.1 TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: esa:ESA_02596 quinolinate synthetase; quinolinate synthetase complex, subunit A 3302553 8118307 Dd1591_2898 Dickeya zeae Ech1591 quinolinate synthetase complex, subunit A YP_003005199.1 3301504 R 561229 CDS YP_003005200.1 251790479 8118308 complement(3302756..3303475) 1 NC_012912.1 PFAM: protein of unknown function DUF554; KEGG: eca:ECA1376 hypothetical protein; hypothetical protein 3303475 8118308 Dd1591_2899 Dickeya zeae Ech1591 hypothetical protein YP_003005200.1 3302756 R 561229 CDS YP_003005201.1 251790480 8118311 complement(3304270..3305088) 1 NC_012912.1 TIGRFAM: tol-pal system protein YbgF; KEGG: eca:ECA1375 hypothetical protein; tol-pal system protein YbgF 3305088 8118311 Dd1591_2900 Dickeya zeae Ech1591 tol-pal system protein YbgF YP_003005201.1 3304270 R 561229 CDS YP_003005202.1 251790481 8118312 complement(3305098..3305604) 1 NC_012912.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: eca:ECA1374 peptidoglycan-associated outer membrane lipoprotein; peptidoglycan-associated outer membrane lipoprotein 3305604 8118312 Dd1591_2901 Dickeya zeae Ech1591 peptidoglycan-associated outer membrane lipoprotein YP_003005202.1 3305098 R 561229 CDS YP_003005203.1 251790482 8118313 complement(3305643..3306929) 1 NC_012912.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3306929 tolB 8118313 tolB Dickeya zeae Ech1591 translocation protein TolB YP_003005203.1 3305643 R 561229 CDS YP_003005204.1 251790483 8118314 complement(3307062..3308261) 1 NC_012912.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 3308261 tolA 8118314 tolA Dickeya zeae Ech1591 cell envelope integrity inner membrane protein TolA YP_003005204.1 3307062 R 561229 CDS YP_003005205.1 251790484 8118315 complement(3308340..3308765) 1 NC_012912.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 3308765 8118315 Dd1591_2904 Dickeya zeae Ech1591 colicin uptake protein TolR YP_003005205.1 3308340 R 561229 CDS YP_003005206.1 251790485 8118316 complement(3308778..3309464) 1 NC_012912.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 3309464 8118316 Dd1591_2905 Dickeya zeae Ech1591 colicin uptake protein TolQ YP_003005206.1 3308778 R 561229 CDS YP_003005207.1 251790486 8118317 complement(3309461..3309865) 1 NC_012912.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC 3309865 8118317 Dd1591_2906 Dickeya zeae Ech1591 acyl-CoA thioester hydrolase YbgC YP_003005207.1 3309461 R 561229 CDS YP_003005208.1 251790487 8118318 complement(3310000..3310290) 1 NC_012912.1 TIGRFAM: cyd operon protein YbgE; KEGG: eca:ECA1368 hypothetical protein; hypothetical protein 3310290 8118318 Dd1591_2907 Dickeya zeae Ech1591 hypothetical protein YP_003005208.1 3310000 R 561229 CDS YP_003005209.1 251790488 8118319 complement(3310287..3310403) 1 NC_012912.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: eca:ECA1367 hypothetical protein; cyd operon protein YbgT 3310403 8118319 Dd1591_2908 Dickeya zeae Ech1591 cyd operon protein YbgT YP_003005209.1 3310287 R 561229 CDS YP_003005210.1 251790489 8118320 complement(3310421..3311560) 1 NC_012912.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: eca:ECA1366 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 3311560 8118320 Dd1591_2909 Dickeya zeae Ech1591 cytochrome d ubiquinol oxidase subunit II YP_003005210.1 3310421 R 561229 CDS YP_003005211.1 251790490 8118321 complement(3311573..3313138) 1 NC_012912.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: eca:ECA1365 cytochrome d ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 3313138 8118321 Dd1591_2910 Dickeya zeae Ech1591 cytochrome bd ubiquinol oxidase subunit I YP_003005211.1 3311573 R 561229 CDS YP_003005212.1 251790491 8118322 complement(3313837..3314709) 1 NC_012912.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 3314709 8118322 Dd1591_2911 Dickeya zeae Ech1591 succinyl-CoA synthetase subunit alpha YP_003005212.1 3313837 R 561229 CDS YP_003005213.1 251790492 8118323 complement(3314709..3315875) 1 NC_012912.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 3315875 sucC 8118323 sucC Dickeya zeae Ech1591 succinyl-CoA synthetase subunit beta YP_003005213.1 3314709 R 561229 CDS YP_003005214.1 251790493 8118324 complement(3316015..3317241) 1 NC_012912.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: eca:ECA1362 dihydrolipoamide acetyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 3317241 8118324 Dd1591_2913 Dickeya zeae Ech1591 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_003005214.1 3316015 R 561229 CDS YP_003005215.1 251790494 8118325 complement(3317259..3320066) 1 NC_012912.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 3320066 sucA 8118325 sucA Dickeya zeae Ech1591 2-oxoglutarate dehydrogenase E1 component YP_003005215.1 3317259 R 561229 CDS YP_003005216.1 251790495 8118326 complement(3320309..3321025) 1 NC_012912.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: eca:ECA1360 succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein 3321025 8118326 Dd1591_2915 Dickeya zeae Ech1591 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003005216.1 3320309 R 561229 CDS YP_003005217.1 251790496 8118327 complement(3321044..3322810) 1 NC_012912.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3322810 sdhA 8118327 sdhA Dickeya zeae Ech1591 succinate dehydrogenase flavoprotein subunit YP_003005217.1 3321044 R 561229 CDS YP_003005218.1 251790497 8118328 complement(3322810..3323157) 1 NC_012912.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: eca:ECA1358 succinate dehydrogenase cytochrome b556 small membrane subunit; succinate dehydrogenase cytochrome b556 small membrane subunit 3323157 sdhD 8118328 sdhD Dickeya zeae Ech1591 succinate dehydrogenase cytochrome b556 small membrane subunit YP_003005218.1 3322810 R 561229 CDS YP_003005219.1 251790498 8118329 complement(3323151..3323540) 1 NC_012912.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: see:SNSL254_A0791 succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase, cytochrome b556 subunit 3323540 8118329 Dd1591_2918 Dickeya zeae Ech1591 succinate dehydrogenase, cytochrome b556 subunit YP_003005219.1 3323151 R 561229 CDS YP_003005220.1 251790499 8118330 3324192..3325478 1 NC_012912.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 3325478 gltA 8118330 gltA Dickeya zeae Ech1591 type II citrate synthase YP_003005220.1 3324192 D 561229 CDS YP_003005221.1 251790500 8118331 complement(3325575..3326312) 1 NC_012912.1 PFAM: LamB/YcsF family protein; KEGG: yen:YE2953 hypothetical protein; LamB/YcsF family protein 3326312 8118331 Dd1591_2920 Dickeya zeae Ech1591 LamB/YcsF family protein YP_003005221.1 3325575 R 561229 CDS YP_003005222.1 251790501 8118332 complement(3326302..3327231) 1 NC_012912.1 KEGG: eca:ECA1352 putative allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase related protein 3327231 8118332 Dd1591_2921 Dickeya zeae Ech1591 urea amidolyase related protein YP_003005222.1 3326302 R 561229 CDS YP_003005223.1 251790502 8118333 complement(3327225..3327884) 1 NC_012912.1 PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: eca:ECA1351 putative allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 3327884 8118333 Dd1591_2922 Dickeya zeae Ech1591 allophanate hydrolase subunit 1 YP_003005223.1 3327225 R 561229 CDS YP_003005224.1 251790503 8118334 complement(3327974..3328717) 1 NC_012912.1 PFAM: protein of unknown function DUF34; KEGG: yen:YE2955 putative hydrolase-oxidase; hypothetical protein 3328717 8118334 Dd1591_2923 Dickeya zeae Ech1591 hypothetical protein YP_003005224.1 3327974 R 561229 CDS YP_003005225.1 251790504 8118335 complement(3328748..3330178) 1 NC_012912.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase 3330178 8118335 Dd1591_2924 Dickeya zeae Ech1591 deoxyribodipyrimidine photolyase YP_003005225.1 3328748 R 561229 CDS YP_003005226.1 251790505 8118336 complement(3330234..3331193) 1 NC_012912.1 PFAM: Protein of unknown function DUF1722; protein of unknown function DUF523; KEGG: eca:ECA1348 hypothetical protein; hypothetical protein 3331193 8118336 Dd1591_2925 Dickeya zeae Ech1591 hypothetical protein YP_003005226.1 3330234 R 561229 CDS YP_003005227.1 251790506 8118337 complement(3331386..3331592) 1 NC_012912.1 KEGG: eca:ECA1344 hypothetical protein; hypothetical protein 3331592 8118337 Dd1591_2926 Dickeya zeae Ech1591 hypothetical protein YP_003005227.1 3331386 R 561229 CDS YP_003005228.1 251790507 8118338 3332080..3333765 1 NC_012912.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3333765 8118338 Dd1591_2927 Dickeya zeae Ech1591 potassium-transporting ATPase subunit A YP_003005228.1 3332080 D 561229 CDS YP_003005229.1 251790508 8118339 3333780..3335846 1 NC_012912.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 3335846 8118339 Dd1591_2928 Dickeya zeae Ech1591 potassium-transporting ATPase subunit B YP_003005229.1 3333780 D 561229 CDS YP_003005230.1 251790509 8118340 3335862..3336437 1 NC_012912.1 KEGG: eca:ECA1340 potassium-transporting ATPase C chain; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase, subunit C 3336437 8118340 Dd1591_2929 Dickeya zeae Ech1591 potassium-transporting ATPase, subunit C YP_003005230.1 3335862 D 561229 CDS YP_003005231.1 251790510 8118341 3336488..3339217 1 NC_012912.1 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 3339217 8118341 Dd1591_2930 Dickeya zeae Ech1591 sensor protein KdpD YP_003005231.1 3336488 D 561229 CDS YP_003005232.1 251790511 8118342 3339214..3339903 1 NC_012912.1 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 3339903 8118342 Dd1591_2931 Dickeya zeae Ech1591 DNA-binding transcriptional activator KdpE YP_003005232.1 3339214 D 561229 CDS YP_003005233.1 251790512 8118343 3339989..3340417 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA1337 hypothetical protein; hypothetical protein 3340417 8118343 Dd1591_2932 Dickeya zeae Ech1591 hypothetical protein YP_003005233.1 3339989 D 561229 CDS YP_003005234.1 251790513 8118344 complement(3340480..3342123) 1 NC_012912.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 3342123 8118344 Dd1591_2933 Dickeya zeae Ech1591 phosphoglucomutase YP_003005234.1 3340480 R 561229 CDS YP_003005235.1 251790514 8118345 complement(3342149..3342688) 1 NC_012912.1 PFAM: SeqA family protein; KEGG: eca:ECA1335 replication initiation regulator SeqA; SeqA family protein 3342688 8118345 Dd1591_2934 Dickeya zeae Ech1591 SeqA family protein YP_003005235.1 3342149 R 561229 CDS YP_003005236.1 251790515 8118346 3342931..3343713 1 NC_012912.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: eca:ECA1334 hypothetical protein; hypothetical protein 3343713 8118346 Dd1591_2935 Dickeya zeae Ech1591 hypothetical protein YP_003005236.1 3342931 D 561229 CDS YP_003005237.1 251790516 8118347 3343979..3344260 1 NC_012912.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: eca:ECA1333 LexA regulated protein; LexA regulated protein 3344260 8118347 Dd1591_2936 Dickeya zeae Ech1591 LexA regulated protein YP_003005237.1 3343979 D 561229 CDS YP_003005238.1 251790517 8118348 complement(3344303..3345997) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA1332 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3345997 8118348 Dd1591_2937 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003005238.1 3344303 R 561229 CDS YP_003005239.1 251790518 8118349 3346418..3346945 1 NC_012912.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: eca:ECA1330 flavodoxin FldA; flavodoxin 3346945 8118349 Dd1591_2938 Dickeya zeae Ech1591 flavodoxin YP_003005239.1 3346418 D 561229 CDS YP_003005240.1 251790519 8118350 3347288..3347734 1 NC_012912.1 PFAM: ferric-uptake regulator; KEGG: spe:Spro_1236 ferric uptake regulator; ferric uptake regulator, Fur family 3347734 8118350 Dd1591_2939 Dickeya zeae Ech1591 ferric uptake regulator, Fur family YP_003005240.1 3347288 D 561229 CDS YP_003005241.1 251790520 8118351 complement(3347808..3349466) 1 NC_012912.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 3349466 8118351 Dd1591_2940 Dickeya zeae Ech1591 glutaminyl-tRNA synthetase YP_003005241.1 3347808 R 561229 CDS YP_003005242.1 251790521 8118352 complement(3349631..3351103) 1 NC_012912.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA1327 PTS system, N-acetylglucosamine-specific IIABC component; PTS system N-acetylglucosamine-specific transporter subunit IIBC 3351103 8118352 Dd1591_2941 Dickeya zeae Ech1591 PTS system N-acetylglucosamine-specific transporter subunit IIBC YP_003005242.1 3349631 R 561229 CDS YP_003005243.1 251790522 8118353 3351442..3352242 1 NC_012912.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 3352242 nagB 8118353 nagB Dickeya zeae Ech1591 glucosamine-6-phosphate deaminase YP_003005243.1 3351442 D 561229 CDS YP_003005244.1 251790523 8118354 3352268..3353419 1 NC_012912.1 KEGG: eca:ECA1325 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 3353419 8118354 Dd1591_2943 Dickeya zeae Ech1591 N-acetylglucosamine-6-phosphate deacetylase YP_003005244.1 3352268 D 561229 CDS YP_003005245.1 251790524 8118355 3353450..3354673 1 NC_012912.1 PFAM: ROK family protein; KEGG: eca:ECA1324 N-acetylglucosamine repressor; ROK family protein 3354673 8118355 Dd1591_2944 Dickeya zeae Ech1591 ROK family protein YP_003005245.1 3353450 D 561229 CDS YP_003005246.1 251790525 8118356 3354981..3356645 1 NC_012912.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 3356645 asnB 8118356 asnB Dickeya zeae Ech1591 asparagine synthetase B YP_003005246.1 3354981 D 561229 CDS YP_003005247.1 251790526 8118363 complement(3357601..3357930) 1 NC_012912.1 PFAM: small multidrug resistance protein; KEGG: esa:ESA_01940 hypothetical protein; small multidrug resistance protein 3357930 8118363 Dd1591_2946 Dickeya zeae Ech1591 small multidrug resistance protein YP_003005247.1 3357601 R 561229 CDS YP_003005248.1 251790527 8118364 complement(3358109..3359275) 1 NC_012912.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 3359275 ubiF 8118364 ubiF Dickeya zeae Ech1591 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_003005248.1 3358109 R 561229 CDS YP_003005249.1 251790528 8118365 3359514..3360944 1 NC_012912.1 KEGG: eca:ECA1319 hypothetical protein; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB 3360944 8118365 Dd1591_2948 Dickeya zeae Ech1591 tRNA-i(6)A37 thiotransferase enzyme MiaB YP_003005249.1 3359514 D 561229 CDS YP_003005250.1 251790529 8118366 3361178..3362230 1 NC_012912.1 PFAM: PhoH family protein; KEGG: spe:Spro_1218 PhoH family protein; PhoH family protein 3362230 8118366 Dd1591_2949 Dickeya zeae Ech1591 PhoH family protein YP_003005250.1 3361178 D 561229 CDS YP_003005251.1 251790530 8118367 3362227..3362712 1 NC_012912.1 PFAM: protein of unknown function UPF0054; KEGG: eca:ECA1317 putative metalloprotease; putative metalloprotease 3362712 8118367 Dd1591_2950 Dickeya zeae Ech1591 putative metalloprotease YP_003005251.1 3362227 D 561229 CDS YP_003005252.1 251790531 8118368 3362807..3363676 1 NC_012912.1 PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: eca:ECA1316 magnesium and cobalt efflux protein corc; CBS domain-containing protein 3363676 8118368 Dd1591_2951 Dickeya zeae Ech1591 CBS domain-containing protein YP_003005252.1 3362807 D 561229 CDS YP_003005253.1 251790532 8118369 3363684..3365213 1 NC_012912.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 3365213 lnt 8118369 lnt Dickeya zeae Ech1591 apolipoprotein N-acyltransferase YP_003005253.1 3363684 D 561229 CDS YP_003005254.1 251790533 8118370 3365589..3366482 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA1314 glutamate and aspartate transporter subunit; extracellular solute-binding protein family 3 3366482 8118370 Dd1591_2953 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003005254.1 3365589 D 561229 CDS YP_003005255.1 251790534 8118371 3366646..3367386 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1313 glutamate/aspartate transport system permease protein; polar amino acid ABC transporter permease 3367386 8118371 Dd1591_2954 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003005255.1 3366646 D 561229 CDS YP_003005256.1 251790535 8118372 3367387..3368061 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1312 glutamate/aspartate transport system permease protein; polar amino acid ABC transporter permease 3368061 8118372 Dd1591_2955 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003005256.1 3367387 D 561229 CDS YP_003005257.1 251790536 8118373 3368061..3368786 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1311 glutamate/aspartate transport ATP-binding protein; ABC transporter 3368786 8118373 Dd1591_2956 Dickeya zeae Ech1591 ABC transporter YP_003005257.1 3368061 D 561229 CDS YP_003005258.1 251790537 8118374 complement(3368849..3369328) 1 NC_012912.1 PFAM: protein of unknown function DUF1451; KEGG: eca:ECA1310 hypothetical protein; hypothetical protein 3369328 8118374 Dd1591_2957 Dickeya zeae Ech1591 hypothetical protein YP_003005258.1 3368849 R 561229 CDS YP_003005259.1 251790538 8118375 3369599..3372181 1 NC_012912.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3372181 leuS 8118375 leuS Dickeya zeae Ech1591 leucyl-tRNA synthetase YP_003005259.1 3369599 D 561229 CDS YP_003005260.1 251790539 8118376 3372196..3372750 1 NC_012912.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 3372750 8118376 Dd1591_2959 Dickeya zeae Ech1591 LPS-assembly lipoprotein RlpB YP_003005260.1 3372196 D 561229 CDS YP_003005261.1 251790540 8118377 3372747..3373778 1 NC_012912.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 3373778 holA 8118377 holA Dickeya zeae Ech1591 DNA polymerase III subunit delta YP_003005261.1 3372747 D 561229 CDS YP_003005262.1 251790541 8118378 3373783..3374442 1 NC_012912.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 3374442 nadD 8118378 nadD Dickeya zeae Ech1591 nicotinic acid mononucleotide adenylyltransferase YP_003005262.1 3373783 D 561229 CDS YP_003005263.1 251790542 8118379 3374620..3374937 1 NC_012912.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: esa:ESA_02690 hypothetical protein; hypothetical protein 3374937 8118379 Dd1591_2962 Dickeya zeae Ech1591 hypothetical protein YP_003005263.1 3374620 D 561229 CDS YP_003005264.1 251790543 8118380 3374939..3375409 1 NC_012912.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3375409 8118380 Dd1591_2963 Dickeya zeae Ech1591 rRNA large subunit methyltransferase YP_003005264.1 3374939 D 561229 CDS YP_003005265.1 251790544 8118381 3375446..3377356 1 NC_012912.1 KEGG: eca:ECA1303 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 3377356 8118381 Dd1591_2964 Dickeya zeae Ech1591 penicillin-binding protein 2 YP_003005265.1 3375446 D 561229 CDS YP_003005266.1 251790545 8118382 3377364..3378476 1 NC_012912.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: yen:YE3003 cell wall shape-determining protein; cell wall shape-determining protein 3378476 8118382 Dd1591_2965 Dickeya zeae Ech1591 cell wall shape-determining protein YP_003005266.1 3377364 D 561229 CDS YP_003005267.1 251790546 8118383 3378486..3379631 1 NC_012912.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: eca:ECA1301 rare lipoprotein A; rare lipoprotein A 3379631 8118383 Dd1591_2966 Dickeya zeae Ech1591 rare lipoprotein A YP_003005267.1 3378486 D 561229 CDS YP_003005268.1 251790547 8118384 3379814..3381025 1 NC_012912.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase fraction A 3381025 8118384 Dd1591_2967 Dickeya zeae Ech1591 D-alanyl-D-alanine carboxypeptidase fraction A YP_003005268.1 3379814 D 561229 CDS YP_003005269.1 251790548 8118385 3381161..3381424 1 NC_012912.1 PFAM: protein of unknown function DUF493; KEGG: spe:Spro_1197 hypothetical protein; hypothetical protein 3381424 8118385 Dd1591_2968 Dickeya zeae Ech1591 hypothetical protein YP_003005269.1 3381161 D 561229 CDS YP_003005270.1 251790549 8118386 3381530..3382264 1 NC_012912.1 KEGG: eca:ECA1298 lipoyltransferase; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 3382264 8118386 Dd1591_2969 Dickeya zeae Ech1591 lipoate-protein ligase B YP_003005270.1 3381530 D 561229 CDS YP_003005271.1 251790550 8116947 3382436..3383401 1 NC_012912.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3383401 8116947 Dd1591_2970 Dickeya zeae Ech1591 lipoyl synthase YP_003005271.1 3382436 D 561229 CDS YP_003005272.1 251790551 8116948 complement(3383506..3383715) 1 NC_012912.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: eca:ECA1296 twin argininte translocase protein A; twin-arginine translocation protein, TatA/E family subunit 3383715 8116948 Dd1591_2971 Dickeya zeae Ech1591 twin-arginine translocation protein, TatA/E family subunit YP_003005272.1 3383506 R 561229 CDS YP_003005273.1 251790552 8116949 complement(3383868..3384656) 1 NC_012912.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eta:ETA_23610 putative hydrolase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3384656 8116949 Dd1591_2972 Dickeya zeae Ech1591 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003005273.1 3383868 R 561229 CDS YP_003005274.1 251790553 8116950 3384868..3385251 1 NC_012912.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: eca:ECA1295 hypothetical protein; CrcB protein 3385251 8116950 Dd1591_2973 Dickeya zeae Ech1591 CrcB protein YP_003005274.1 3384868 D 561229 CDS YP_003005275.1 251790554 8116951 complement(3385317..3385526) 1 NC_012912.1 member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 3385526 cspE 8116951 cspE Dickeya zeae Ech1591 cold shock protein CspE YP_003005275.1 3385317 R 561229 CDS YP_003005276.1 251790555 8116952 3386523..3386906 1 NC_012912.1 PFAM: arsenate reductase and related; KEGG: eca:ECA1292 hypothetical protein; arsenate reductase-like protein 3386906 8116952 Dd1591_2975 Dickeya zeae Ech1591 arsenate reductase-like protein YP_003005276.1 3386523 D 561229 CDS YP_003005277.1 251790556 8116953 3386887..3388014 1 NC_012912.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3388014 8116953 Dd1591_2976 Dickeya zeae Ech1591 succinyl-diaminopimelate desuccinylase YP_003005277.1 3386887 D 561229 CDS YP_003005278.1 251790557 8116954 3388011..3388685 1 NC_012912.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: eca:ECA1290 putative D-alanyl-D-alanine carboxypeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 3388685 8116954 Dd1591_2977 Dickeya zeae Ech1591 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_003005278.1 3388011 D 561229 CDS YP_003005279.1 251790558 8116955 3388724..3388912 1 NC_012912.1 KEGG: ypi:YpsIP31758_1253 hypothetical protein; hypothetical protein 3388912 8116955 Dd1591_2978 Dickeya zeae Ech1591 hypothetical protein YP_003005279.1 3388724 D 561229 CDS YP_003005280.1 251790559 8116956 complement(3389028..3389714) 1 NC_012912.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH 3389714 8116956 Dd1591_2979 Dickeya zeae Ech1591 esterase YpfH YP_003005280.1 3389028 R 561229 CDS YP_003005281.1 251790560 8116957 complement(3389947..3391977) 1 NC_012912.1 PFAM: protein of unknown function DUF699 ATPase putative; GCN5-related N-acetyltransferase; KEGG: eca:ECA1266 putative acetyltransferase; hypothetical protein 3391977 8116957 Dd1591_2980 Dickeya zeae Ech1591 hypothetical protein YP_003005281.1 3389947 R 561229 CDS YP_003005282.1 251790561 8116958 complement(3391997..3392449) 1 NC_012912.1 PFAM: protein of unknown function DUF441; KEGG: eca:ECA1265 hypothetical protein; hypothetical protein 3392449 8116958 Dd1591_2981 Dickeya zeae Ech1591 hypothetical protein YP_003005282.1 3391997 R 561229 CDS YP_003005283.1 251790562 8116959 complement(3392662..3393375) 1 NC_012912.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3393375 8116959 Dd1591_2982 Dickeya zeae Ech1591 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_003005283.1 3392662 R 561229 CDS YP_003005284.1 251790563 8116960 complement(3393795..3394835) 1 NC_012912.1 PFAM: NlpBDapX family lipoprotein; KEGG: eca:ECA1263 lipoprotein; lipoprotein 3394835 8116960 Dd1591_2983 Dickeya zeae Ech1591 lipoprotein YP_003005284.1 3393795 R 561229 CDS YP_003005285.1 251790564 8116961 complement(3394852..3395730) 1 NC_012912.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3395730 8116961 Dd1591_2984 Dickeya zeae Ech1591 dihydrodipicolinate synthase YP_003005285.1 3394852 R 561229 CDS YP_003005286.1 251790565 8116962 3395833..3396447 1 NC_012912.1 PFAM: amino acid-binding ACT domain protein; KEGG: spe:Spro_3510 glycine cleavage system transcriptional repressor; amino acid-binding ACT domain-containing protein 3396447 8116962 Dd1591_2985 Dickeya zeae Ech1591 amino acid-binding ACT domain-containing protein YP_003005286.1 3395833 D 561229 CDS YP_003005287.1 251790566 8116963 3396450..3396917 1 NC_012912.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 3396917 bcp 8116963 bcp Dickeya zeae Ech1591 thioredoxin-dependent thiol peroxidase YP_003005287.1 3396450 D 561229 CDS YP_003005288.1 251790567 8116964 3397094..3398557 1 NC_012912.1 PFAM: peptidase M48 Ste24p; KEGG: eca:ECA1259 hypothetical protein; peptidase M48 Ste24p 3398557 8116964 Dd1591_2987 Dickeya zeae Ech1591 peptidase M48 Ste24p YP_003005288.1 3397094 D 561229 CDS YP_003005289.1 251790568 8116965 3398572..3398928 1 NC_012912.1 KEGG: esa:ESA_00766 hypothetical protein; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 3398928 8116965 Dd1591_2988 Dickeya zeae Ech1591 arsenate reductase YP_003005289.1 3398572 D 561229 CDS YP_003005290.1 251790569 8116966 complement(3398938..3399645) 1 NC_012912.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 3399645 8116966 Dd1591_2989 Dickeya zeae Ech1591 DNA replication initiation factor YP_003005290.1 3398938 R 561229 CDS YP_003005291.1 251790570 8116967 complement(3399761..3401050) 1 NC_012912.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: eca:ECA1256 uracil transporter; uracil transporter 3401050 8116967 Dd1591_2990 Dickeya zeae Ech1591 uracil transporter YP_003005291.1 3399761 R 561229 CDS YP_003005292.1 251790571 8116968 complement(3401231..3401857) 1 NC_012912.1 KEGG: eca:ECA1255 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 3401857 8116968 Dd1591_2991 Dickeya zeae Ech1591 uracil phosphoribosyltransferase YP_003005292.1 3401231 R 561229 CDS YP_003005293.1 251790572 8116969 3402132..3403169 1 NC_012912.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3403169 8116969 Dd1591_2992 Dickeya zeae Ech1591 phosphoribosylaminoimidazole synthetase YP_003005293.1 3402132 D 561229 CDS YP_003005294.1 251790573 8116970 3403169..3403807 1 NC_012912.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: yen:YE1125 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 3403807 8116970 Dd1591_2993 Dickeya zeae Ech1591 phosphoribosylglycinamide formyltransferase YP_003005294.1 3403169 D 561229 CDS YP_003005295.1 251790574 8116971 3404059..3405057 1 NC_012912.1 negative regulator of the mglBAC operon for galactose utilization; DNA-binding transcriptional regulator GalS 3405057 8116971 Dd1591_2994 Dickeya zeae Ech1591 DNA-binding transcriptional regulator GalS YP_003005295.1 3404059 D 561229 CDS YP_003005296.1 251790575 8116972 3405475..3406470 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: efe:EFER_2235 methyl-galactoside transporter subunit ; periplasmic-binding component of ABC superfamily; periplasmic binding protein/LacI transcriptional regulator 3406470 8116972 Dd1591_2995 Dickeya zeae Ech1591 periplasmic binding protein/LacI transcriptional regulator YP_003005296.1 3405475 D 561229 CDS YP_003005297.1 251790576 8116973 3406592..3408112 1 NC_012912.1 with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 3408112 8116973 Dd1591_2996 Dickeya zeae Ech1591 galactose/methyl galaxtoside transporter ATP-binding protein YP_003005297.1 3406592 D 561229 CDS YP_003005298.1 251790577 8116974 3408132..3409142 1 NC_012912.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane component 3409142 mglC 8116974 mglC Dickeya zeae Ech1591 beta-methylgalactoside transporter inner membrane component YP_003005298.1 3408132 D 561229 CDS YP_003005299.1 251790578 8116975 3409397..3410218 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: pfo:Pfl01_2802 extracellular solute-binding protein; extracellular solute-binding protein family 3 3410218 8116975 Dd1591_2998 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003005299.1 3409397 D 561229 CDS YP_003005300.1 251790579 8116976 3410218..3411063 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl01_2801 amino acid ABC transporter permease; polar amino acid ABC transporter permease 3411063 8116976 Dd1591_2999 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003005300.1 3410218 D 561229 CDS YP_003005301.1 251790580 8116977 3411245..3412354 1 NC_012912.1 PFAM: periplasmic binding protein; KEGG: yen:YE3190 hypothetical protein; periplasmic binding protein 3412354 8116977 Dd1591_3000 Dickeya zeae Ech1591 periplasmic binding protein YP_003005301.1 3411245 D 561229 CDS YP_003005302.1 251790581 8116978 3412347..3414512 1 NC_012912.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spe:Spro_1016 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3414512 8116978 Dd1591_3001 Dickeya zeae Ech1591 TonB-dependent siderophore receptor YP_003005302.1 3412347 D 561229 CDS YP_003005303.1 251790582 8116979 3414645..3415205 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE1124 spermidine acetyltransferase; Diamine N-acetyltransferase 3415205 8116979 Dd1591_3002 Dickeya zeae Ech1591 Diamine N-acetyltransferase YP_003005303.1 3414645 D 561229 CDS YP_003005304.1 251790583 8116980 complement(3415246..3417678) 1 NC_012912.1 PFAM: protein of unknown function DUF214; KEGG: eca:ECA1224 hypothetical protein; hypothetical protein 3417678 8116980 Dd1591_3003 Dickeya zeae Ech1591 hypothetical protein YP_003005304.1 3415246 R 561229 CDS YP_003005305.1 251790584 8116981 complement(3417675..3418361) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_1158 putative ABC transporter ATP-binding protein YbbA; ABC transporter 3418361 8116981 Dd1591_3004 Dickeya zeae Ech1591 ABC transporter YP_003005305.1 3417675 R 561229 CDS YP_003005306.1 251790585 8116982 3418422..3418970 1 NC_012912.1 PFAM: lipolytic protein G-D-S-L family; KEGG: esa:ESA_02772 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Lysophospholipase 3418970 8116982 Dd1591_3005 Dickeya zeae Ech1591 Lysophospholipase YP_003005306.1 3418422 D 561229 CDS YP_003005307.1 251790586 8116983 3419034..3419810 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA1221 short chain dehydrogenase; short chain dehydrogenase 3419810 8116983 Dd1591_3006 Dickeya zeae Ech1591 short chain dehydrogenase YP_003005307.1 3419034 D 561229 CDS YP_003005308.1 251790587 8116984 3419872..3420732 1 NC_012912.1 PFAM: Thioredoxin domain; KEGG: eca:ECA1220 putative thioredoxin; Thioredoxin domain-containing protein 3420732 8116984 Dd1591_3007 Dickeya zeae Ech1591 Thioredoxin domain-containing protein YP_003005308.1 3419872 D 561229 CDS YP_003005309.1 251790588 8116985 complement(3420790..3421983) 1 NC_012912.1 TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: eca:ECA1219 competence damage-inducible protein A; competence damage-inducible protein A 3421983 8116985 Dd1591_3008 Dickeya zeae Ech1591 competence damage-inducible protein A YP_003005309.1 3420790 R 561229 CDS YP_003005310.1 251790589 8116986 complement(3422123..3422668) 1 NC_012912.1 PFAM: YfaZ family protein; KEGG: eca:ECA1217 hypothetical protein; YfaZ family protein 3422668 8116986 Dd1591_3009 Dickeya zeae Ech1591 YfaZ family protein YP_003005310.1 3422123 R 561229 CDS YP_003005311.1 251790590 8116987 complement(3422854..3424242) 1 NC_012912.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA1215 O-succinylbenzoic acid--CoA ligase; O-succinylbenzoic acid--CoA ligase 3424242 8116987 Dd1591_3010 Dickeya zeae Ech1591 O-succinylbenzoic acid--CoA ligase YP_003005311.1 3422854 R 561229 CDS YP_003005312.1 251790591 8116988 complement(3424230..3425198) 1 NC_012912.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 3425198 8116988 Dd1591_3011 Dickeya zeae Ech1591 O-succinylbenzoate synthase YP_003005312.1 3424230 R 561229 CDS YP_003005313.1 251790592 8116989 complement(3425198..3426055) 1 NC_012912.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 3426055 8116989 Dd1591_3012 Dickeya zeae Ech1591 naphthoate synthase YP_003005313.1 3425198 R 561229 CDS YP_003005314.1 251790593 8116990 complement(3426039..3426830) 1 NC_012912.1 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB 3426830 8116990 Dd1591_3013 Dickeya zeae Ech1591 acyl-CoA thioester hydrolase YfbB YP_003005314.1 3426039 R 561229 CDS YP_003005315.1 251790594 8116991 complement(3426830..3428506) 1 NC_012912.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 3428506 8116991 Dd1591_3014 Dickeya zeae Ech1591 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_003005315.1 3426830 R 561229 CDS YP_003005316.1 251790595 8116992 complement(3428605..3429930) 1 NC_012912.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: eca:ECA1210 menaquinone-specific isochorismate synthase; isochorismate synthase 3429930 8116992 Dd1591_3015 Dickeya zeae Ech1591 isochorismate synthase YP_003005316.1 3428605 R 561229 CDS YP_003005317.1 251790596 8116993 3431059..3433728 1 NC_012912.1 KEGG: eca:ECA1204 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 3433728 8116993 Dd1591_3016 Dickeya zeae Ech1591 phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_003005317.1 3431059 D 561229 CDS YP_003005318.1 251790597 8116994 3433734..3434384 1 NC_012912.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 3434384 8116994 Dd1591_3017 Dickeya zeae Ech1591 transcriptional regulator RcsB YP_003005318.1 3433734 D 561229 CDS YP_003005319.1 251790598 8116995 complement(3434445..3437312) 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: eca:ECA1202 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 3437312 8116995 Dd1591_3018 Dickeya zeae Ech1591 hybrid sensory kinase in two-component regulatory system with RcsB and YojN YP_003005319.1 3434445 R 561229 CDS YP_003005320.1 251790599 8116996 complement(3437435..3440068) 1 NC_012912.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 3440068 8116996 Dd1591_3019 Dickeya zeae Ech1591 DNA gyrase subunit A YP_003005320.1 3437435 R 561229 CDS YP_003005321.1 251790600 8116997 3440323..3441072 1 NC_012912.1 KEGG: eca:ECA1200 3-demethylubiquinone-9 3-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase 3441072 8116997 Dd1591_3020 Dickeya zeae Ech1591 ubiquinone biosynthesis O-methyltransferase YP_003005321.1 3440323 D 561229 CDS YP_003005322.1 251790601 8116998 3441581..3443869 1 NC_012912.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3443869 8116998 Dd1591_3021 Dickeya zeae Ech1591 ribonucleotide-diphosphate reductase subunit alpha YP_003005322.1 3441581 D 561229 CDS YP_003005323.1 251790602 8116999 3444036..3445166 1 NC_012912.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 3445166 nrdB 8116999 nrdB Dickeya zeae Ech1591 ribonucleotide-diphosphate reductase subunit beta YP_003005323.1 3444036 D 561229 CDS YP_003005324.1 251790603 8117000 3445172..3445432 1 NC_012912.1 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin YfaE 3445432 8117000 Dd1591_3023 Dickeya zeae Ech1591 2Fe-2S ferredoxin YfaE YP_003005324.1 3445172 D 561229 CDS YP_003005325.1 251790604 8117001 3445567..3446481 1 NC_012912.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: eca:ECA1196 hypothetical protein; hypothetical protein 3446481 8117001 Dd1591_3024 Dickeya zeae Ech1591 hypothetical protein YP_003005325.1 3445567 D 561229 CDS YP_003005326.1 251790605 8117002 3446484..3446939 1 NC_012912.1 PFAM: protein of unknown function DUF107; KEGG: eca:ECA1195 hypothetical protein; hypothetical protein 3446939 8117002 Dd1591_3025 Dickeya zeae Ech1591 hypothetical protein YP_003005326.1 3446484 D 561229 CDS YP_003005327.1 251790606 8117003 complement(3447053..3447466) 1 NC_012912.1 KEGG: eca:ECA1194 copper efflux regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 3447466 8117003 Dd1591_3026 Dickeya zeae Ech1591 MerR family transcriptional regulator YP_003005327.1 3447053 R 561229 CDS YP_003005328.1 251790607 8117004 3447590..3450409 1 NC_012912.1 TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA1193 copper exporting ATPase; copper-translocating P-type ATPase 3450409 8117004 Dd1591_3027 Dickeya zeae Ech1591 copper-translocating P-type ATPase YP_003005328.1 3447590 D 561229 CDS YP_003005329.1 251790608 8117005 3450590..3451402 1 NC_012912.1 PFAM: GumN family protein; KEGG: eca:ECA1192 hypothetical protein; GumN family protein 3451402 8117005 Dd1591_3028 Dickeya zeae Ech1591 GumN family protein YP_003005329.1 3450590 D 561229 CDS YP_003005330.1 251790609 8117006 3451420..3451899 1 NC_012912.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: eca:ECA1191 hypothetical protein; hypothetical protein 3451899 8117006 Dd1591_3029 Dickeya zeae Ech1591 hypothetical protein YP_003005330.1 3451420 D 561229 CDS YP_003005331.1 251790610 8117007 complement(3451999..3453402) 1 NC_012912.1 PFAM: glycoside hydrolase family 28; KEGG: eca:ECA1190 putative polygalacturonase; glycoside hydrolase family 28 3453402 8117007 Dd1591_3030 Dickeya zeae Ech1591 glycoside hydrolase family 28 YP_003005331.1 3451999 R 561229 CDS YP_003005332.1 251790611 8117008 complement(3453682..3455271) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: bac:BamMC406_6172 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3455271 8117008 Dd1591_3031 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003005332.1 3453682 R 561229 CDS YP_003005333.1 251790612 8117009 complement(3456080..3457732) 1 NC_012912.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 3457732 ushA 8117009 ushA Dickeya zeae Ech1591 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor YP_003005333.1 3456080 R 561229 CDS YP_003005334.1 251790613 8117010 3458225..3459910 1 NC_012912.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; putative cation:proton antiport protein 3459910 8117010 Dd1591_3033 Dickeya zeae Ech1591 putative cation:proton antiport protein YP_003005334.1 3458225 D 561229 CDS YP_003005335.1 251790614 8117011 complement(3459965..3460927) 1 NC_012912.1 KEGG: eca:ECA1181 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase; ferrochelatase 3460927 8117011 Dd1591_3034 Dickeya zeae Ech1591 ferrochelatase YP_003005335.1 3459965 R 561229 CDS YP_003005336.1 251790615 8117012 complement(3461135..3461779) 1 NC_012912.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: spe:Spro_1139 nucleoside-triphosphate--adenylate kinase; adenylate kinase 3461779 8117012 Dd1591_3035 Dickeya zeae Ech1591 adenylate kinase YP_003005336.1 3461135 R 561229 CDS YP_003005337.1 251790616 8117013 complement(3462081..3463970) 1 NC_012912.1 molecular chaperone; heat shock protein 90 3463970 8117013 Dd1591_3036 Dickeya zeae Ech1591 heat shock protein 90 YP_003005337.1 3462081 R 561229 CDS YP_003005338.1 251790617 8117014 complement(3464152..3464757) 1 NC_012912.1 KEGG: spe:Spro_1137 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; SMART: Toprim sub domain protein; recombination protein RecR 3464757 8117014 Dd1591_3037 Dickeya zeae Ech1591 recombination protein RecR YP_003005338.1 3464152 R 561229 CDS YP_003005339.1 251790618 8117015 complement(3464757..3465086) 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: see:SNSL254_A0536 hypothetical protein; hypothetical protein 3465086 8117015 Dd1591_3038 Dickeya zeae Ech1591 hypothetical protein YP_003005339.1 3464757 R 561229 CDS YP_003005340.1 251790619 8117016 complement(3465130..3467166) 1 NC_012912.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 3467166 8117016 Dd1591_3039 Dickeya zeae Ech1591 DNA polymerase III subunits gamma and tau YP_003005340.1 3465130 R 561229 CDS YP_003005341.1 251790620 8117017 complement(3467241..3467789) 1 NC_012912.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 3467789 8117017 Dd1591_3040 Dickeya zeae Ech1591 adenine phosphoribosyltransferase YP_003005341.1 3467241 R 561229 CDS YP_003005342.1 251790621 8117018 complement(3467968..3468336) 1 NC_012912.1 PFAM: protein of unknown function DUF454; KEGG: esa:ESA_02802 hypothetical protein; hypothetical protein 3468336 8117018 Dd1591_3041 Dickeya zeae Ech1591 hypothetical protein YP_003005342.1 3467968 R 561229 CDS YP_003005343.1 251790622 8117019 3468464..3469234 1 NC_012912.1 PFAM: tRNA-hydroxylase; KEGG: vsp:VS_2052 tRNA-hydroxylase; tRNA-hydroxylase 3469234 8117019 Dd1591_3042 Dickeya zeae Ech1591 tRNA-hydroxylase YP_003005343.1 3468464 D 561229 CDS YP_003005344.1 251790623 8117020 3469299..3469832 1 NC_012912.1 PFAM: Primosomal replication priB and priC; KEGG: eca:ECA1173 primosomal replication protein N''; Primosomal replication priB and priC 3469832 8117020 Dd1591_3043 Dickeya zeae Ech1591 Primosomal replication priB and priC YP_003005344.1 3469299 D 561229 CDS YP_003005345.1 251790624 8117021 3469911..3470078 1 NC_012912.1 KEGG: eta:ETA_24780 hypothetical protein; hypothetical protein 3470078 8117021 Dd1591_3044 Dickeya zeae Ech1591 hypothetical protein YP_003005345.1 3469911 D 561229 CDS YP_003005346.1 251790625 8117022 complement(3470148..3473549) 1 NC_012912.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 3473549 8117022 Dd1591_3045 Dickeya zeae Ech1591 potassium efflux protein KefA YP_003005346.1 3470148 R 561229 CDS YP_003005347.1 251790626 8117023 complement(3473703..3474353) 1 NC_012912.1 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR 3474353 8117023 Dd1591_3046 Dickeya zeae Ech1591 DNA-binding transcriptional repressor AcrR YP_003005347.1 3473703 R 561229 CDS YP_003005348.1 251790627 8117024 3474496..3475686 1 NC_012912.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eca:ECA1170 acriflavine resistance protein A; RND family efflux transporter MFP subunit 3475686 8117024 Dd1591_3047 Dickeya zeae Ech1591 RND family efflux transporter MFP subunit YP_003005348.1 3474496 D 561229 CDS YP_003005349.1 251790628 8117025 3475703..3478846 1 NC_012912.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: eca:ECA1169 acriflavin resistance protein B; transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3478846 8117025 Dd1591_3048 Dickeya zeae Ech1591 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_003005349.1 3475703 D 561229 CDS YP_003005350.1 251790629 8117026 3479014..3479265 1 NC_012912.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: spe:Spro_1125 50S ribosomal protein L31 type B; 50S ribosomal protein L31 3479265 8117026 Dd1591_3049 Dickeya zeae Ech1591 50S ribosomal protein L31 YP_003005350.1 3479014 D 561229 CDS YP_003005351.1 251790630 8117747 3479281..3479424 1 NC_012912.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 3479424 rpmJ 8117747 rpmJ Dickeya zeae Ech1591 50S ribosomal protein L36 YP_003005351.1 3479281 D 561229 CDS YP_003005352.1 251790631 8117748 3479933..3480301 1 NC_012912.1 KEGG: eca:ECA1166 hypothetical protein; hypothetical protein 3480301 8117748 Dd1591_3051 Dickeya zeae Ech1591 hypothetical protein YP_003005352.1 3479933 D 561229 CDS YP_003005353.1 251790632 8117749 3480355..3480558 1 NC_012912.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 3480558 8117749 Dd1591_3052 Dickeya zeae Ech1591 hemolysin expression-modulating protein YP_003005353.1 3480355 D 561229 CDS YP_003005354.1 251790633 8117751 3481137..3481463 1 NC_012912.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: eca:ECA1164 putative 6-O-methylguanine DNA methyltransferase; methylated-DNA/protein-cysteine methyltransferase 3481463 8117751 Dd1591_3053 Dickeya zeae Ech1591 methylated-DNA/protein-cysteine methyltransferase YP_003005354.1 3481137 D 561229 CDS YP_003005355.1 251790634 8117752 complement(3481493..3482050) 1 NC_012912.1 KEGG: eca:ECA1163 lipoprotein; lipoprotein 3482050 8117752 Dd1591_3054 Dickeya zeae Ech1591 lipoprotein YP_003005355.1 3481493 R 561229 CDS YP_003005356.1 251790635 8117753 3482269..3483132 1 NC_012912.1 TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: eca:ECA1162 acyl-CoA thioesterase II; acyl-CoA thioesterase II 3483132 8117753 Dd1591_3055 Dickeya zeae Ech1591 acyl-CoA thioesterase II YP_003005356.1 3482269 D 561229 CDS YP_003005357.1 251790636 8117754 complement(3483246..3484538) 1 NC_012912.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: eca:ECA1161 ammonium transporter; ammonium transporter 3484538 8117754 Dd1591_3056 Dickeya zeae Ech1591 ammonium transporter YP_003005357.1 3483246 R 561229 CDS YP_003005358.1 251790637 8117755 complement(3484582..3484920) 1 NC_012912.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 3484920 8117755 Dd1591_3057 Dickeya zeae Ech1591 nitrogen regulatory protein P-II 2 YP_003005358.1 3484582 R 561229 CDS YP_003005359.1 251790638 8117756 complement(3485214..3487007) 1 NC_012912.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eca:ECA1159 putative multidrug transporter membrane\ATP-binding components; putative multidrug transporter membrane\ATP-binding protein 3487007 8117756 Dd1591_3058 Dickeya zeae Ech1591 putative multidrug transporter membrane\ATP-binding protein YP_003005359.1 3485214 R 561229 CDS YP_003005360.1 251790639 8117757 complement(3487000..3488766) 1 NC_012912.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eca:ECA1158 putative multidrug transporter membrane\ATP-binding components; putative multidrug transporter membrane\ATP-binding protein 3488766 8117757 Dd1591_3059 Dickeya zeae Ech1591 putative multidrug transporter membrane\ATP-binding protein YP_003005360.1 3487000 R 561229 CDS YP_003005361.1 251790640 8117758 complement(3488848..3489309) 1 NC_012912.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA1157 transcription regulator AsnC; AsnC family transcriptional regulator 3489309 8117758 Dd1591_3060 Dickeya zeae Ech1591 AsnC family transcriptional regulator YP_003005361.1 3488848 R 561229 CDS YP_003005362.1 251790641 8117759 3489487..3490536 1 NC_012912.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: eca:ECA1156 putative pyridoxal-phosphate dependent protein; Pyridoxal-5'-phosphate-dependent protein subunit beta 3490536 8117759 Dd1591_3061 Dickeya zeae Ech1591 Pyridoxal-5'-phosphate-dependent protein subunit beta YP_003005362.1 3489487 D 561229 CDS YP_003005363.1 251790642 8117760 3490651..3491346 1 NC_012912.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: eca:ECA1155 queuosine biosynthesis protein QueC; exsB protein 3491346 8117760 Dd1591_3062 Dickeya zeae Ech1591 exsB protein YP_003005363.1 3490651 D 561229 CDS YP_003005364.1 251790643 8117761 complement(3491447..3491839) 1 NC_012912.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: eca:ECA1153 hypothetical protein; competence protein ComEA helix-hairpin-helix repeat protein 3491839 8117761 Dd1591_3063 Dickeya zeae Ech1591 competence protein ComEA helix-hairpin-helix repeat protein YP_003005364.1 3491447 R 561229 CDS YP_003005365.1 251790644 8117762 complement(3491978..3493858) 1 NC_012912.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: eca:ECA1152 peptidyl-prolyl cis-trans isomerase (rotamase D); peptidyl-prolyl cis-trans isomerase (rotamase D) 3493858 8117762 Dd1591_3064 Dickeya zeae Ech1591 peptidyl-prolyl cis-trans isomerase (rotamase D) YP_003005365.1 3491978 R 561229 CDS YP_003005366.1 251790645 8117763 complement(3494113..3494385) 1 NC_012912.1 histone-like DNA-binding protein; transcriptional regulator HU subunit beta 3494385 8117763 Dd1591_3065 Dickeya zeae Ech1591 transcriptional regulator HU subunit beta YP_003005366.1 3494113 R 561229 CDS YP_003005367.1 251790646 8117764 complement(3494580..3496943) 1 NC_012912.1 KEGG: eca:ECA1150 DNA-binding ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; DNA-binding ATP-dependent protease La 3496943 8117764 Dd1591_3066 Dickeya zeae Ech1591 DNA-binding ATP-dependent protease La YP_003005367.1 3494580 R 561229 CDS YP_003005368.1 251790647 8117765 complement(3497133..3498407) 1 NC_012912.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 3498407 clpX 8117765 clpX Dickeya zeae Ech1591 ATP-dependent protease ATP-binding subunit ClpX YP_003005368.1 3497133 R 561229 CDS YP_003005369.1 251790648 8117766 complement(3498535..3499158) 1 NC_012912.1 KEGG: sgl:SG0671 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 3499158 8117766 Dd1591_3068 Dickeya zeae Ech1591 ATP-dependent Clp protease, proteolytic subunit ClpP YP_003005369.1 3498535 R 561229 CDS YP_003005370.1 251790649 8117767 complement(3499547..3500851) 1 NC_012912.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 3500851 tig 8117767 tig Dickeya zeae Ech1591 trigger factor YP_003005370.1 3499547 R 561229 CDS YP_003005371.1 251790650 8117768 complement(3501162..3501476) 1 NC_012912.1 PFAM: BolA family protein; KEGG: eca:ECA1146 transcriptional regulator BolA; BolA family protein 3501476 8117768 Dd1591_3070 Dickeya zeae Ech1591 BolA family protein YP_003005371.1 3501162 R 561229 CDS YP_003005372.1 251790651 8117769 3501794..3502372 1 NC_012912.1 PFAM: Uncharacterized lipoprotein; KEGG: eca:ECA1145 hypothetical protein; hypothetical protein 3502372 8117769 Dd1591_3071 Dickeya zeae Ech1591 hypothetical protein YP_003005372.1 3501794 D 561229 CDS YP_003005373.1 251790652 8117770 3502431..3503900 1 NC_012912.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 3503900 ampG 8117770 ampG Dickeya zeae Ech1591 muropeptide transporter YP_003005373.1 3502431 D 561229 CDS YP_003005374.1 251790653 8117771 3504436..3505389 1 NC_012912.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II; KEGG: eca:ECA1143 cytochrome o ubiquinol oxidase subunit II; cytochrome o ubiquinol oxidase subunit II 3505389 8117771 Dd1591_3073 Dickeya zeae Ech1591 cytochrome o ubiquinol oxidase subunit II YP_003005374.1 3504436 D 561229 CDS YP_003005375.1 251790654 8117772 3505410..3507401 1 NC_012912.1 KEGG: eca:ECA1142 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 3507401 8117772 Dd1591_3074 Dickeya zeae Ech1591 cytochrome o ubiquinol oxidase subunit I YP_003005375.1 3505410 D 561229 CDS YP_003005376.1 251790655 8117773 3507391..3508005 1 NC_012912.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: eca:ECA1141 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 3508005 8117773 Dd1591_3075 Dickeya zeae Ech1591 cytochrome o ubiquinol oxidase subunit III YP_003005376.1 3507391 D 561229 CDS YP_003005377.1 251790656 8117774 3508005..3508337 1 NC_012912.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: eca:ECA1140 cytochrome o ubiquinol oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 3508337 8117774 Dd1591_3076 Dickeya zeae Ech1591 cytochrome o ubiquinol oxidase subunit IV YP_003005377.1 3508005 D 561229 CDS YP_003005378.1 251790657 8117775 3508351..3509244 1 NC_012912.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 3509244 8117775 Dd1591_3077 Dickeya zeae Ech1591 protoheme IX farnesyltransferase YP_003005378.1 3508351 D 561229 CDS YP_003005379.1 251790658 8117776 3509393..3510766 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1138 transporter; major facilitator superfamily protein 3510766 8117776 Dd1591_3078 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005379.1 3509393 D 561229 CDS YP_003005380.1 251790659 8117777 complement(3510913..3511404) 1 NC_012912.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 3511404 8117777 Dd1591_3079 Dickeya zeae Ech1591 putative nucleotide-binding protein YP_003005380.1 3510913 R 561229 CDS YP_003005381.1 251790660 8117778 3511572..3512492 1 NC_012912.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 3512492 8117778 Dd1591_3080 Dickeya zeae Ech1591 2-dehydropantoate 2-reductase YP_003005381.1 3511572 D 561229 CDS YP_003005382.1 251790661 8117779 3512455..3513051 1 NC_012912.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA1135 hypothetical protein; DJ-1 family protein 3513051 8117779 Dd1591_3081 Dickeya zeae Ech1591 DJ-1 family protein YP_003005382.1 3512455 D 561229 CDS YP_003005383.1 251790662 8117780 complement(3513121..3514569) 1 NC_012912.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 3514569 8117780 Dd1591_3082 Dickeya zeae Ech1591 thiamine biosynthesis protein ThiI YP_003005383.1 3513121 R 561229 CDS YP_003005384.1 251790663 8117781 3514834..3515082 1 NC_012912.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: eca:ECA1133 exodeoxyribonuclease VII small subunit; exodeoxyribonuclease VII small subunit 3515082 8117781 Dd1591_3083 Dickeya zeae Ech1591 exodeoxyribonuclease VII small subunit YP_003005384.1 3514834 D 561229 CDS YP_003005385.1 251790664 8117782 3515079..3515990 1 NC_012912.1 PFAM: Polyprenyl synthetase; KEGG: eca:ECA1132 geranyltranstransferase; geranyltranstransferase 3515990 8117782 Dd1591_3084 Dickeya zeae Ech1591 geranyltranstransferase YP_003005385.1 3515079 D 561229 CDS YP_003005386.1 251790665 8117783 3516017..3517879 1 NC_012912.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 3517879 8117783 Dd1591_3085 Dickeya zeae Ech1591 1-deoxy-D-xylulose-5-phosphate synthase YP_003005386.1 3516017 D 561229 CDS YP_003005387.1 251790666 8117784 complement(3517980..3518492) 1 NC_012912.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 3518492 8117784 Dd1591_3086 Dickeya zeae Ech1591 phosphatidylglycerophosphatase A YP_003005387.1 3517980 R 561229 CDS YP_003005388.1 251790667 8117785 complement(3518473..3519447) 1 NC_012912.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3519447 8117785 Dd1591_3087 Dickeya zeae Ech1591 thiamine monophosphate kinase YP_003005388.1 3518473 R 561229 CDS YP_003005389.1 251790668 8117786 complement(3519508..3519927) 1 NC_012912.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3519927 nusB 8117786 nusB Dickeya zeae Ech1591 transcription antitermination protein NusB YP_003005389.1 3519508 R 561229 CDS YP_003005390.1 251790669 8117787 complement(3519950..3520423) 1 NC_012912.1 KEGG: pmr:PMI0082 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 3520423 8117787 Dd1591_3089 Dickeya zeae Ech1591 6,7-dimethyl-8-ribityllumazine synthase YP_003005390.1 3519950 R 561229 CDS YP_003005391.1 251790670 8117788 complement(3520544..3521656) 1 NC_012912.1 KEGG: eca:ECA1126 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 3521656 8117788 Dd1591_3090 Dickeya zeae Ech1591 riboflavin biosynthesis protein RibD YP_003005391.1 3520544 R 561229 CDS YP_003005392.1 251790671 8117789 complement(3521722..3522171) 1 NC_012912.1 PFAM: ATP-cone domain protein; KEGG: eca:ECA1125 transcriptional regulator NrdR; transcriptional regulator NrdR 3522171 nrdR 8117789 nrdR Dickeya zeae Ech1591 transcriptional regulator NrdR YP_003005392.1 3521722 R 561229 CDS YP_003005393.1 251790672 8117790 3522632..3525343 1 NC_012912.1 P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA 3525343 8117790 Dd1591_3092 Dickeya zeae Ech1591 magnesium-transporting ATPase MgtA YP_003005393.1 3522632 D 561229 CDS YP_003005394.1 251790673 8117791 3525522..3526091 1 NC_012912.1 KEGG: eca:ECA1124 hypothetical protein; hypothetical protein 3526091 8117791 Dd1591_3093 Dickeya zeae Ech1591 hypothetical protein YP_003005394.1 3525522 D 561229 CDS YP_003005395.1 251790674 8117792 complement(3526217..3527188) 1 NC_012912.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3527188 secF 8117792 secF Dickeya zeae Ech1591 preprotein translocase subunit SecF YP_003005395.1 3526217 R 561229 CDS YP_003005396.1 251790675 8117793 complement(3527199..3529013) 1 NC_012912.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3529013 secD 8117793 secD Dickeya zeae Ech1591 preprotein translocase subunit SecD YP_003005396.1 3527199 R 561229 CDS YP_003005397.1 251790676 8117794 complement(3529075..3529410) 1 NC_012912.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: efe:EFER_2618 SecYEG protein translocase auxillary subunit; preprotein translocase subunit YajC 3529410 8117794 Dd1591_3096 Dickeya zeae Ech1591 preprotein translocase subunit YajC YP_003005397.1 3529075 R 561229 CDS YP_003005398.1 251790677 8117795 complement(3529477..3530640) 1 NC_012912.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3530640 tgt 8117795 tgt Dickeya zeae Ech1591 queuine tRNA-ribosyltransferase YP_003005398.1 3529477 R 561229 CDS YP_003005399.1 251790678 8117796 complement(3530730..3531803) 1 NC_012912.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3531803 queA 8117796 queA Dickeya zeae Ech1591 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003005399.1 3530730 R 561229 CDS YP_003005400.1 251790679 8117797 3531957..3532562 1 NC_012912.1 PFAM: protein of unknown function DUF479; KEGG: eca:ECA1118 hypothetical protein; (Acyl-carrier-protein) phosphodiesterase 3532562 8117797 Dd1591_3099 Dickeya zeae Ech1591 (Acyl-carrier-protein) phosphodiesterase YP_003005400.1 3531957 D 561229 CDS YP_003005401.1 251790680 8117798 3532740..3533342 1 NC_012912.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: yen:YE3174 putative alkyl hydroperoxide reductase subunit C; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3533342 8117798 Dd1591_3100 Dickeya zeae Ech1591 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_003005401.1 3532740 D 561229 CDS YP_003005402.1 251790681 8117799 complement(3533421..3534773) 1 NC_012912.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; putative proline-specific permease 3534773 proY 8117799 proY Dickeya zeae Ech1591 putative proline-specific permease YP_003005402.1 3533421 R 561229 CDS YP_003005403.1 251790682 8117800 complement(3534852..3536174) 1 NC_012912.1 TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; KEGG: eca:ECA1114 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 3536174 8117800 Dd1591_3102 Dickeya zeae Ech1591 branched-chain amino acid transport system II carrier protein YP_003005403.1 3534852 R 561229 CDS YP_003005404.1 251790683 8117801 complement(3536602..3537708) 1 NC_012912.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 3537708 8117801 Dd1591_3103 Dickeya zeae Ech1591 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_003005404.1 3536602 R 561229 CDS YP_003005405.1 251790684 8117802 complement(3537929..3538903) 1 NC_012912.1 TIGRFAM: phosphate binding protein; KEGG: eca:ECA1112 putative phosphate binding protein; phosphate binding protein 3538903 8117802 Dd1591_3104 Dickeya zeae Ech1591 phosphate binding protein YP_003005405.1 3537929 R 561229 CDS YP_003005406.1 251790685 8117803 complement(3538984..3540306) 1 NC_012912.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 3540306 phoR 8117803 phoR Dickeya zeae Ech1591 phosphate regulon sensor protein YP_003005406.1 3538984 R 561229 CDS YP_003005407.1 251790686 8117804 complement(3540333..3541022) 1 NC_012912.1 KEGG: eca:ECA1110 phosphate regulon response regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component transcriptional regulator PhoB, winged helix family 3541022 8117804 Dd1591_3106 Dickeya zeae Ech1591 two component transcriptional regulator PhoB, winged helix family YP_003005407.1 3540333 R 561229 CDS YP_003005408.1 251790687 8117805 3541361..3542593 1 NC_012912.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: spe:Spro_1040 exonuclease subunit SbcD; nuclease SbcCD, subunit D 3542593 8117805 Dd1591_3107 Dickeya zeae Ech1591 nuclease SbcCD, subunit D YP_003005408.1 3541361 D 561229 CDS YP_003005409.1 251790688 8117806 3542590..3546273 1 NC_012912.1 PFAM: SMC domain protein; KEGG: eca:ECA1108 exonuclease; SMC domain-containing protein 3546273 8117806 Dd1591_3108 Dickeya zeae Ech1591 SMC domain-containing protein YP_003005409.1 3542590 D 561229 CDS YP_003005410.1 251790689 8117807 complement(3546309..3547220) 1 NC_012912.1 PFAM: ROK family protein; KEGG: eca:ECA1107 fructokinase; ROK family protein 3547220 8117807 Dd1591_3109 Dickeya zeae Ech1591 ROK family protein YP_003005410.1 3546309 R 561229 CDS YP_003005411.1 251790690 8117808 3547391..3548302 1 NC_012912.1 PFAM: putative exonuclease RdgC; KEGG: spe:Spro_1027 recombination associated protein; putative exonuclease RdgC 3548302 8117808 Dd1591_3110 Dickeya zeae Ech1591 putative exonuclease RdgC YP_003005411.1 3547391 D 561229 CDS YP_003005412.1 251790691 8117809 complement(3548348..3550138) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1105 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3550138 8117809 Dd1591_3111 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003005412.1 3548348 R 561229 CDS YP_003005413.1 251790692 8117810 complement(3550608..3550892) 1 NC_012912.1 PFAM: protein of unknown function DUF1255; KEGG: eca:ECA1104 hypothetical protein; hypothetical protein 3550892 8117810 Dd1591_3112 Dickeya zeae Ech1591 hypothetical protein YP_003005413.1 3550608 R 561229 CDS YP_003005414.1 251790693 8117811 complement(3550929..3551450) 1 NC_012912.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase II 3551450 aroL 8117811 aroL Dickeya zeae Ech1591 shikimate kinase II YP_003005414.1 3550929 R 561229 CDS YP_003005415.1 251790694 8117812 complement(3551767..3552813) 1 NC_012912.1 KEGG: eca:ECA1102 L-asparaginase precursor; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; L-asparaginase, type II 3552813 8117812 Dd1591_3114 Dickeya zeae Ech1591 L-asparaginase, type II YP_003005415.1 3551767 R 561229 CDS YP_003005416.1 251790695 8117813 complement(3553088..3554188) 1 NC_012912.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: bbt:BBta_5702 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Methionine synthase vitamin-B12 independent 3554188 8117813 Dd1591_3115 Dickeya zeae Ech1591 Methionine synthase vitamin-B12 independent YP_003005416.1 3553088 R 561229 CDS YP_003005417.1 251790696 8117814 3554598..3555785 1 NC_012912.1 KEGG: eca:ECA1090 putative lipoprotein; putative lipoprotein 3555785 8117814 Dd1591_3116 Dickeya zeae Ech1591 putative lipoprotein YP_003005417.1 3554598 D 561229 CDS YP_003005418.1 251790697 8117815 3555914..3556570 1 NC_012912.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: spe:Spro_1624 HAD family hydrolase; HAD-superfamily hydrolase 3556570 8117815 Dd1591_3117 Dickeya zeae Ech1591 HAD-superfamily hydrolase YP_003005418.1 3555914 D 561229 CDS YP_003005419.1 251790698 8117816 complement(3556586..3557527) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2075 LysR family transcriptional regulator; LysR family transcriptional regulator 3557527 8117816 Dd1591_3118 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005419.1 3556586 R 561229 CDS YP_003005420.1 251790699 8117817 3557691..3559118 1 NC_012912.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eca:ECA2074 hypothetical protein; hypothetical protein 3559118 8117817 Dd1591_3119 Dickeya zeae Ech1591 hypothetical protein YP_003005420.1 3557691 D 561229 CDS YP_003005421.1 251790700 8117818 3559127..3560401 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bur:Bcep18194_A4727 major facilitator transporter; major facilitator superfamily protein 3560401 8117818 Dd1591_3120 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005421.1 3559127 D 561229 CDS YP_003005422.1 251790701 8117819 complement(3560501..3561700) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: spq:SPAB_05417 hypothetical protein; major facilitator superfamily protein 3561700 8117819 Dd1591_3121 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005422.1 3560501 R 561229 CDS YP_003005423.1 251790702 8117820 complement(3561678..3562208) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0956 putative acetyltransferase; Phosphinothricin acetyltransferase 3562208 8117820 Dd1591_3122 Dickeya zeae Ech1591 Phosphinothricin acetyltransferase YP_003005423.1 3561678 R 561229 CDS YP_003005424.1 251790703 8117821 3562366..3563247 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_3436 transcriptional regulator, LysR family; LysR family transcriptional regulator 3563247 8117821 Dd1591_3123 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005424.1 3562366 D 561229 CDS YP_003005425.1 251790704 8117822 complement(3563328..3563906) 1 NC_012912.1 KEGG: eca:ECA3090 hypothetical protein; hypothetical protein 3563906 8117822 Dd1591_3124 Dickeya zeae Ech1591 hypothetical protein YP_003005425.1 3563328 R 561229 CDS YP_003005426.1 251790705 8117823 3564347..3565582 1 NC_012912.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: eca:ECA1089 hypothetical protein; protein serine/threonine phosphatase 3565582 8117823 Dd1591_3125 Dickeya zeae Ech1591 protein serine/threonine phosphatase YP_003005426.1 3564347 D 561229 CDS YP_003005427.1 251790706 8117824 3565610..3566161 1 NC_012912.1 KEGG: eca:ECA1088 hypothetical protein; hypothetical protein 3566161 8117824 Dd1591_3126 Dickeya zeae Ech1591 hypothetical protein YP_003005427.1 3565610 D 561229 CDS YP_003005428.1 251790707 8117825 3566164..3566598 1 NC_012912.1 KEGG: eca:ECA1087 putative lipoprotein; putative lipoprotein 3566598 8117825 Dd1591_3127 Dickeya zeae Ech1591 putative lipoprotein YP_003005428.1 3566164 D 561229 CDS YP_003005429.1 251790708 8117826 3566603..3567328 1 NC_012912.1 KEGG: eca:ECA1086 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3567328 8117826 Dd1591_3128 Dickeya zeae Ech1591 diguanylate cyclase YP_003005429.1 3566603 D 561229 CDS YP_003005430.1 251790709 8120994 complement(3567390..3567731) 1 NC_012912.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: eca:ECA1082 phosphonoacetate hydrolase; alkylphosphonate utilization operon protein PhnA 3567731 8120994 Dd1591_3129 Dickeya zeae Ech1591 alkylphosphonate utilization operon protein PhnA YP_003005430.1 3567390 R 561229 CDS YP_003005431.1 251790710 8120995 3568046..3569266 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: mmw:Mmwyl1_3284 major facilitator transporter; major facilitator superfamily protein 3569266 8120995 Dd1591_3130 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005431.1 3568046 D 561229 CDS YP_003005432.1 251790711 8120996 complement(3569344..3571107) 1 NC_012912.1 PFAM: Pyoverdine biosynthesis protein; Taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN0964 clavaminate synthase-like; PvcA-like domain; Pyoverdine biosynthesis protein 3571107 8120996 Dd1591_3131 Dickeya zeae Ech1591 Pyoverdine biosynthesis protein YP_003005432.1 3569344 R 561229 CDS YP_003005433.1 251790712 8120997 complement(3571439..3572119) 1 NC_012912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0963 hydrolase; predicted phosphatase; HAD-superfamily hydrolase 3572119 8120997 Dd1591_3132 Dickeya zeae Ech1591 HAD-superfamily hydrolase YP_003005433.1 3571439 R 561229 CDS YP_003005434.1 251790713 8120998 complement(3572176..3573183) 1 NC_012912.1 PFAM: Pyoverdine biosynthesis protein; KEGG: pen:PSEEN0962 siderophore biosynthesis protein PvcA-like; Pyoverdine biosynthesis protein 3573183 8120998 Dd1591_3133 Dickeya zeae Ech1591 Pyoverdine biosynthesis protein YP_003005434.1 3572176 R 561229 CDS YP_003005435.1 251790714 8120999 complement(3574539..3575159) 1 NC_012912.1 PFAM: PEBP family protein; KEGG: rfr:Rfer_3962 YbcL; PEBP family protein 3575159 8120999 Dd1591_3134 Dickeya zeae Ech1591 PEBP family protein YP_003005435.1 3574539 R 561229 CDS YP_003005436.1 251790715 8121000 3575301..3576149 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spe:Spro_2944 AraC family transcriptional regulator; AraC family transcriptional regulator 3576149 8121000 Dd1591_3135 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003005436.1 3575301 D 561229 CDS YP_003005437.1 251790716 8121001 3576268..3577158 1 NC_012912.1 PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: eca:ECA1579 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 3577158 8121001 Dd1591_3136 Dickeya zeae Ech1591 2-dehydropantoate 2-reductase YP_003005437.1 3576268 D 561229 CDS YP_003005438.1 251790717 8121002 complement(3577164..3577757) 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: mno:Mnod_7468 transcriptional regulator, TetR family; TetR family transcriptional regulator 3577757 8121002 Dd1591_3137 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003005438.1 3577164 R 561229 CDS YP_003005439.1 251790718 8121003 3577903..3578643 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mno:Mnod_7469 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3578643 8121003 Dd1591_3138 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005439.1 3577903 D 561229 CDS YP_003005440.1 251790719 8121004 3578937..3579488 1 NC_012912.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pst:PSPTO_0818 MarR family transcriptional regulator; MarR family transcriptional regulator 3579488 8121004 Dd1591_3139 Dickeya zeae Ech1591 MarR family transcriptional regulator YP_003005440.1 3578937 D 561229 CDS YP_003005441.1 251790720 8121005 3579519..3580253 1 NC_012912.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: smd:Smed_5816 NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent 3580253 8121005 Dd1591_3140 Dickeya zeae Ech1591 NADP oxidoreductase coenzyme F420-dependent YP_003005441.1 3579519 D 561229 CDS YP_003005442.1 251790721 8121006 3580287..3581000 1 NC_012912.1 PFAM: nitroreductase; KEGG: pla:Plav_2473 nitroreductase; nitroreductase 3581000 8121006 Dd1591_3141 Dickeya zeae Ech1591 nitroreductase YP_003005442.1 3580287 D 561229 CDS YP_003005443.1 251790722 8121007 3581492..3584050 1 NC_012912.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3584050 8121007 Dd1591_3142 Dickeya zeae Ech1591 DNA mismatch repair protein MutS YP_003005443.1 3581492 D 561229 CDS YP_003005444.1 251790723 8121008 complement(3584113..3584724) 1 NC_012912.1 KEGG: eca:ECA1052 lipoprotein involved with copper homeostasis and adhesion; hypothetical protein 3584724 8121008 Dd1591_3143 Dickeya zeae Ech1591 hypothetical protein YP_003005444.1 3584113 R 561229 CDS YP_003005445.1 251790724 8121009 complement(3584770..3585318) 1 NC_012912.1 PFAM: YaeQ family protein; KEGG: yen:YE3261 hypothetical protein; YaeQ family protein 3585318 8121009 Dd1591_3144 Dickeya zeae Ech1591 YaeQ family protein YP_003005445.1 3584770 R 561229 CDS YP_003005446.1 251790725 8121010 3585557..3585757 1 NC_012912.1 PFAM: protein of unknown function UPF0253; KEGG: spe:Spro_3762 hypothetical protein; hypothetical protein 3585757 8121010 Dd1591_3145 Dickeya zeae Ech1591 hypothetical protein YP_003005446.1 3585557 D 561229 CDS YP_003005447.1 251790726 8121011 3585744..3586004 1 NC_012912.1 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator 3586004 8121011 Dd1591_3146 Dickeya zeae Ech1591 Rho-binding antiterminator YP_003005447.1 3585744 D 561229 CDS YP_003005448.1 251790727 8121012 complement(3586060..3587388) 1 NC_012912.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase 3587388 tilS 8121012 tilS Dickeya zeae Ech1591 tRNA(Ile)-lysidine synthetase YP_003005448.1 3586060 R 561229 CDS YP_003005449.1 251790728 8121013 complement(3587378..3587767) 1 NC_012912.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA1048 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 3587767 8121013 Dd1591_3148 Dickeya zeae Ech1591 Glyoxalase/bleomycin resistance protein/dioxygenase YP_003005449.1 3587378 R 561229 CDS YP_003005450.1 251790729 8121014 complement(3587952..3588911) 1 NC_012912.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 3588911 8121014 Dd1591_3149 Dickeya zeae Ech1591 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_003005450.1 3587952 R 561229 CDS YP_003005451.1 251790730 8121015 complement(3588924..3592406) 1 NC_012912.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3592406 dnaE 8121015 dnaE Dickeya zeae Ech1591 DNA polymerase III subunit alpha YP_003005451.1 3588924 R 561229 CDS YP_003005452.1 251790731 8121016 complement(3592484..3593080) 1 NC_012912.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3593080 rnhB 8121016 rnhB Dickeya zeae Ech1591 ribonuclease HII YP_003005452.1 3592484 R 561229 CDS YP_003005453.1 251790732 8121017 complement(3593073..3594224) 1 NC_012912.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3594224 lpxB 8121017 lpxB Dickeya zeae Ech1591 lipid-A-disaccharide synthase YP_003005453.1 3593073 R 561229 CDS YP_003005454.1 251790733 8121018 complement(3594228..3595016) 1 NC_012912.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3595016 8121018 Dd1591_3153 Dickeya zeae Ech1591 UDP-N-acetylglucosamine acyltransferase YP_003005454.1 3594228 R 561229 CDS YP_003005455.1 251790734 8121019 complement(3595020..3595475) 1 NC_012912.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3595475 fabZ 8121019 fabZ Dickeya zeae Ech1591 (3R)-hydroxymyristoyl-ACP dehydratase YP_003005455.1 3595020 R 561229 CDS YP_003005456.1 251790735 8121020 complement(3595626..3596648) 1 NC_012912.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3596648 lpxD 8121020 lpxD Dickeya zeae Ech1591 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_003005456.1 3595626 R 561229 CDS YP_003005457.1 251790736 8121021 complement(3596652..3597149) 1 NC_012912.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: eca:ECA1040 periplasmic chaperone; periplasmic chaperone 3597149 8121021 Dd1591_3156 Dickeya zeae Ech1591 periplasmic chaperone YP_003005457.1 3596652 R 561229 CDS YP_003005458.1 251790737 8121022 complement(3597286..3599703) 1 NC_012912.1 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT 3599703 8121022 Dd1591_3157 Dickeya zeae Ech1591 outer membrane protein assembly factor YaeT YP_003005458.1 3597286 R 561229 CDS YP_003005459.1 251790738 8121023 complement(3599738..3601093) 1 NC_012912.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP 3601093 8121023 Dd1591_3158 Dickeya zeae Ech1591 zinc metallopeptidase RseP YP_003005459.1 3599738 R 561229 CDS YP_003005460.1 251790739 8121024 complement(3601115..3601972) 1 NC_012912.1 PFAM: phosphatidate cytidylyltransferase; KEGG: eca:ECA1037 CDP-diglyceride synthase; Phosphatidate cytidylyltransferase 3601972 8121024 Dd1591_3159 Dickeya zeae Ech1591 Phosphatidate cytidylyltransferase YP_003005460.1 3601115 R 561229 CDS YP_003005461.1 251790740 8121025 complement(3601982..3602743) 1 NC_012912.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: eca:ECA1036 undecaprenyl pyrophosphate synthetase; UDP diphosphate synthase 3602743 8121025 Dd1591_3160 Dickeya zeae Ech1591 UDP diphosphate synthase YP_003005461.1 3601982 R 561229 CDS YP_003005462.1 251790741 8121026 complement(3602925..3604118) 1 NC_012912.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3604118 8121026 Dd1591_3161 Dickeya zeae Ech1591 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003005462.1 3602925 R 561229 CDS YP_003005463.1 251790742 8121027 complement(3604322..3604879) 1 NC_012912.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3604879 frr 8121027 frr Dickeya zeae Ech1591 ribosome recycling factor YP_003005463.1 3604322 R 561229 CDS YP_003005464.1 251790743 8121028 complement(3605222..3605953) 1 NC_012912.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3605953 pyrH 8121028 pyrH Dickeya zeae Ech1591 uridylate kinase YP_003005464.1 3605222 R 561229 CDS YP_003005465.1 251790744 8121029 complement(3606126..3606983) 1 NC_012912.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3606983 tsf 8121029 tsf Dickeya zeae Ech1591 elongation factor Ts YP_003005465.1 3606126 R 561229 CDS YP_003005466.1 251790745 8121030 complement(3607109..3607834) 1 NC_012912.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 3607834 rpsB 8121030 rpsB Dickeya zeae Ech1591 30S ribosomal protein S2 YP_003005466.1 3607109 R 561229 CDS YP_003005467.1 251790746 8121031 3608202..3608996 1 NC_012912.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: eta:ETA_08880 methionine aminopeptidase; methionine aminopeptidase, type I 3608996 8121031 Dd1591_3166 Dickeya zeae Ech1591 methionine aminopeptidase, type I YP_003005467.1 3608202 D 561229 CDS YP_003005468.1 251790747 8121032 3609046..3611727 1 NC_012912.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3611727 8121032 Dd1591_3167 Dickeya zeae Ech1591 PII uridylyl-transferase YP_003005468.1 3609046 D 561229 CDS YP_003005469.1 251790748 8121033 3611800..3612624 1 NC_012912.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3612624 dapD 8121033 dapD Dickeya zeae Ech1591 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_003005469.1 3611800 D 561229 CDS YP_003005470.1 251790749 8121034 3612748..3613134 1 NC_012912.1 KEGG: yen:YE3288 hypothetical protein; hypothetical protein 3613134 8121034 Dd1591_3169 Dickeya zeae Ech1591 hypothetical protein YP_003005470.1 3612748 D 561229 CDS YP_003005471.1 251790750 8121035 complement(3613371..3613823) 1 NC_012912.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 3613823 8121035 Dd1591_3170 Dickeya zeae Ech1591 flavodoxin YP_003005471.1 3613371 R 561229 CDS YP_003005472.1 251790751 8121036 complement(3613842..3614624) 1 NC_012912.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 3614624 8121036 Dd1591_3171 Dickeya zeae Ech1591 tRNA pseudouridine synthase C YP_003005472.1 3613842 R 561229 CDS YP_003005473.1 251790752 8121037 complement(3614627..3614947) 1 NC_012912.1 PFAM: protein of unknown function DUF446; KEGG: eca:ECA1024 hypothetical protein; hypothetical protein 3614947 8121037 Dd1591_3172 Dickeya zeae Ech1591 hypothetical protein YP_003005473.1 3614627 R 561229 CDS YP_003005474.1 251790753 8121038 complement(3615658..3616206) 1 NC_012912.1 putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 3616206 8121038 Dd1591_3173 Dickeya zeae Ech1591 SecY interacting protein Syd YP_003005474.1 3615658 R 561229 CDS YP_003005475.1 251790754 8121039 3616492..3617856 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA1019 lysine decarboxylase family protein; hypothetical protein 3617856 8121039 Dd1591_3174 Dickeya zeae Ech1591 hypothetical protein YP_003005475.1 3616492 D 561229 CDS YP_003005476.1 251790755 8121040 3617913..3618674 1 NC_012912.1 PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: eca:ECA1018 exonuclease IX; 5'-3' exonuclease 3618674 8121040 Dd1591_3175 Dickeya zeae Ech1591 5'-3' exonuclease YP_003005476.1 3617913 D 561229 CDS YP_003005477.1 251790756 8121041 complement(3618747..3619847) 1 NC_012912.1 KEGG: eca:ECA1017 putative RNA 2'-O-ribose methyltransferase; putative RNA 2'-O-ribose methyltransferase 3619847 8121041 Dd1591_3176 Dickeya zeae Ech1591 putative RNA 2'-O-ribose methyltransferase YP_003005477.1 3618747 R 561229 CDS YP_003005478.1 251790757 8121042 complement(3619849..3620235) 1 NC_012912.1 PFAM: protein of unknown function DUF423; KEGG: eca:ECA1016 hypothetical protein; hypothetical protein 3620235 8121042 Dd1591_3177 Dickeya zeae Ech1591 hypothetical protein YP_003005478.1 3619849 R 561229 CDS YP_003005479.1 251790758 8121043 complement(3620318..3621244) 1 NC_012912.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 3621244 8121043 Dd1591_3178 Dickeya zeae Ech1591 DNA-binding transcriptional activator GcvA YP_003005479.1 3620318 R 561229 CDS YP_003005480.1 251790759 8121044 complement(3621598..3621819) 1 NC_012912.1 PFAM: protein of unknown function DUF903; KEGG: eca:ECA1013 putative lipoprotein; hypothetical protein 3621819 8121044 Dd1591_3179 Dickeya zeae Ech1591 hypothetical protein YP_003005480.1 3621598 R 561229 CDS YP_003005481.1 251790760 8121045 3621991..3623196 1 NC_012912.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: eca:ECA1012 cysteine sulfinate desulfinase; cysteine sulfinate desulfinase 3623196 8121045 Dd1591_3180 Dickeya zeae Ech1591 cysteine sulfinate desulfinase YP_003005481.1 3621991 D 561229 CDS YP_003005482.1 251790761 8121046 3623199..3623642 1 NC_012912.1 TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE; KEGG: eca:ECA1011 putative Fe-S metabolism associated protein; cysteine desulfurase, sulfur acceptor subunit CsdE 3623642 8121046 Dd1591_3181 Dickeya zeae Ech1591 cysteine desulfurase, sulfur acceptor subunit CsdE YP_003005482.1 3623199 D 561229 CDS YP_003005483.1 251790762 8121047 complement(3623630..3624463) 1 NC_012912.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eca:ECA1010 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 3624463 8121047 Dd1591_3182 Dickeya zeae Ech1591 UBA/THIF-type NAD/FAD binding protein YP_003005483.1 3623630 R 561229 CDS YP_003005484.1 251790763 8121048 3624795..3625241 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: swd:Swoo_4463 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 3625241 8121048 Dd1591_3183 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005484.1 3624795 D 561229 CDS YP_003005485.1 251790764 8121049 3625260..3626273 1 NC_012912.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: asa:ASA_0954 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 3626273 8121049 Dd1591_3184 Dickeya zeae Ech1591 D-isomer specific 2-hydroxyacid dehydrogenase YP_003005485.1 3625260 D 561229 CDS YP_003005486.1 251790765 8121050 3626273..3626752 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_0582 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 3626752 8121050 Dd1591_3185 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005486.1 3626273 D 561229 CDS YP_003005487.1 251790766 8121051 3626805..3627317 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbp:Sbal223_1772 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 3627317 8121051 Dd1591_3186 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005487.1 3626805 D 561229 CDS YP_003005488.1 251790767 8121052 complement(3627374..3628537) 1 NC_012912.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A 3628537 mltA 8121052 mltA Dickeya zeae Ech1591 murein transglycosylase A YP_003005488.1 3627374 R 561229 CDS YP_003005489.1 251790768 8121055 complement(3629005..3630243) 1 NC_012912.1 KEGG: eca:ECA1000 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 3630243 8121055 Dd1591_3188 Dickeya zeae Ech1591 N-acetylmuramoyl-L-alanine amidase YP_003005489.1 3629005 R 561229 CDS YP_003005490.1 251790769 8121056 3630468..3631793 1 NC_012912.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 3631793 8121056 Dd1591_3189 Dickeya zeae Ech1591 N-acetylglutamate synthase YP_003005490.1 3630468 D 561229 CDS YP_003005491.1 251790770 8121057 complement(3631936..3634839) 1 NC_012912.1 PFAM: peptidase M16 domain protein; KEGG: eca:ECA0994 protease III precursor; Pitrilysin 3634839 8121057 Dd1591_3190 Dickeya zeae Ech1591 Pitrilysin YP_003005491.1 3631936 R 561229 CDS YP_003005492.1 251790771 8121058 complement(3634879..3635265) 1 NC_012912.1 KEGG: eca:ECA0992 putative prepilin peptidase dependent protein c precursor; hypothetical protein 3635265 8121058 Dd1591_3191 Dickeya zeae Ech1591 hypothetical protein YP_003005492.1 3634879 R 561229 CDS YP_003005493.1 251790772 8121059 complement(3635249..3635695) 1 NC_012912.1 KEGG: eca:ECA0991 hypothetical protein; hypothetical protein 3635695 8121059 Dd1591_3192 Dickeya zeae Ech1591 hypothetical protein YP_003005493.1 3635249 R 561229 CDS YP_003005494.1 251790773 8121060 complement(3635685..3636287) 1 NC_012912.1 KEGG: eca:ECA0990 hypothetical protein; hypothetical protein 3636287 8121060 Dd1591_3193 Dickeya zeae Ech1591 hypothetical protein YP_003005494.1 3635685 R 561229 CDS YP_003005495.1 251790774 8121061 complement(3636281..3636772) 1 NC_012912.1 KEGG: eca:ECA0989 hypothetical protein; hypothetical protein 3636772 8121061 Dd1591_3194 Dickeya zeae Ech1591 hypothetical protein YP_003005495.1 3636281 R 561229 CDS YP_003005496.1 251790775 8121062 complement(3637014..3637808) 1 NC_012912.1 KEGG: eca:ECA0988 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 3637808 8121062 Dd1591_3195 Dickeya zeae Ech1591 thymidylate synthase YP_003005496.1 3637014 R 561229 CDS YP_003005497.1 251790776 8121063 complement(3637840..3638703) 1 NC_012912.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3638703 8121063 Dd1591_3196 Dickeya zeae Ech1591 prolipoprotein diacylglyceryl transferase YP_003005497.1 3637840 R 561229 CDS YP_003005498.1 251790777 8121064 complement(3638897..3641146) 1 NC_012912.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain 3641146 8121064 Dd1591_3197 Dickeya zeae Ech1591 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain YP_003005498.1 3638897 R 561229 CDS YP_003005499.1 251790778 8121065 complement(3641158..3641685) 1 NC_012912.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3641685 8121065 Dd1591_3198 Dickeya zeae Ech1591 dinucleoside polyphosphate hydrolase YP_003005499.1 3641158 R 561229 CDS YP_003005500.1 251790779 8121066 3642457..3643143 1 NC_012912.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 3643143 8121066 Dd1591_3199 Dickeya zeae Ech1591 DNA mismatch repair protein YP_003005500.1 3642457 D 561229 CDS YP_003005501.1 251790780 8121067 3643306..3644022 1 NC_012912.1 PFAM: Integral membrane protein TerC; KEGG: eca:ECA0983 hypothetical protein; Integral membrane protein TerC 3644022 8121067 Dd1591_3200 Dickeya zeae Ech1591 Integral membrane protein TerC YP_003005501.1 3643306 D 561229 CDS YP_003005502.1 251790781 8121068 3644176..3644394 1 NC_012912.1 PFAM: protein of unknown function DUF903; KEGG: eca:ECA0982 putative lipoprotein; hypothetical protein 3644394 8121068 Dd1591_3201 Dickeya zeae Ech1591 hypothetical protein YP_003005502.1 3644176 D 561229 CDS YP_003005503.1 251790782 8121069 3644606..3645646 1 NC_012912.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; putative aldo-keto reductase 3645646 tas 8121069 tas Dickeya zeae Ech1591 putative aldo-keto reductase YP_003005503.1 3644606 D 561229 CDS YP_003005504.1 251790783 8121070 complement(3645710..3646423) 1 NC_012912.1 KEGG: eca:ECA0979 hypothetical protein; hypothetical protein 3646423 8121070 Dd1591_3203 Dickeya zeae Ech1591 hypothetical protein YP_003005504.1 3645710 R 561229 CDS YP_003005505.1 251790784 8121071 complement(3646533..3646877) 1 NC_012912.1 PFAM: protein of unknown function DUF469; KEGG: spe:Spro_4041 hypothetical protein; hypothetical protein 3646877 8121071 Dd1591_3204 Dickeya zeae Ech1591 hypothetical protein YP_003005505.1 3646533 R 561229 CDS YP_003005506.1 251790785 8121072 complement(3646877..3647596) 1 NC_012912.1 KEGG: eca:ECA0977 tRNA (guanine-N(7))-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 3647596 8121072 Dd1591_3205 Dickeya zeae Ech1591 tRNA (guanine-N(7)-)-methyltransferase YP_003005506.1 3646877 R 561229 CDS YP_003005507.1 251790786 8121073 3647756..3648841 1 NC_012912.1 KEGG: eca:ECA0976 adenine DNA glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; adenine DNA glycosylase 3648841 8121073 Dd1591_3206 Dickeya zeae Ech1591 adenine DNA glycosylase YP_003005507.1 3647756 D 561229 CDS YP_003005508.1 251790787 8120834 3648844..3649116 1 NC_012912.1 PFAM: Fe(II) trafficking protein YggX; KEGG: esa:ESA_00329 hypothetical protein; Fe(II) trafficking protein YggX 3649116 8120834 Dd1591_3207 Dickeya zeae Ech1591 Fe(II) trafficking protein YggX YP_003005508.1 3648844 D 561229 CDS YP_003005509.1 251790788 8120835 3649171..3650253 1 NC_012912.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 3650253 mltC 8120835 mltC Dickeya zeae Ech1591 murein transglycosylase C YP_003005509.1 3649171 D 561229 CDS YP_003005510.1 251790789 8120836 3650694..3652151 1 NC_012912.1 PFAM: amino acid permease-associated region; KEGG: yps:YPTB1935 APC family L-asparagine permease; amino acid permease-like protein 3652151 8120836 Dd1591_3209 Dickeya zeae Ech1591 amino acid permease-like protein YP_003005510.1 3650694 D 561229 CDS YP_003005511.1 251790790 8120837 complement(3652227..3654380) 1 NC_012912.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: eca:ECA0967 ornithine decarboxylase; ornithine decarboxylase 3654380 8120837 Dd1591_3210 Dickeya zeae Ech1591 ornithine decarboxylase YP_003005511.1 3652227 R 561229 CDS YP_003005512.1 251790791 8120838 complement(3654651..3654776) 1 NC_012912.1 hypothetical protein 3654776 8120838 Dd1591_3211 Dickeya zeae Ech1591 hypothetical protein YP_003005512.1 3654651 R 561229 CDS YP_003005513.1 251790792 8120840 3655722..3656336 1 NC_012912.1 PFAM: protein of unknown function DUF1440; KEGG: eum:ECUMN_0321 conserved hypothetical protein; putative inner membrane protein; hypothetical protein 3656336 8120840 Dd1591_3212 Dickeya zeae Ech1591 hypothetical protein YP_003005513.1 3655722 D 561229 CDS YP_003005514.1 251790793 8120841 join(3656388..3656738,3656737..3657231) 1 NC_012912.1 KEGG: ssn:SSON_P063 ISSfl1 ORF1; transposase and inactivated derivatives-like protein 3657231 8120841 Dd1591_3213 Dickeya zeae Ech1591 transposase and inactivated derivatives-like protein YP_003005514.1 3656388 D 561229 CDS YP_003005515.1 251790794 8120842 3657589..3657753 1 NC_012912.1 hypothetical protein 3657753 8120842 Dd1591_3214 Dickeya zeae Ech1591 hypothetical protein YP_003005515.1 3657589 D 561229 CDS YP_003005516.1 251790795 8120844 complement(3658336..3659010) 1 NC_012912.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: rle:RL2360 hypothetical protein; Helix-turn-helix type 11 domain-containing protein 3659010 8120844 Dd1591_3216 Dickeya zeae Ech1591 Helix-turn-helix type 11 domain-containing protein YP_003005516.1 3658336 R 561229 CDS YP_003005517.1 251790796 8120846 complement(3659188..3659565) 1 NC_012912.1 KEGG: afw:Anae109_4407 hypothetical protein; hypothetical protein 3659565 8120846 Dd1591_3218 Dickeya zeae Ech1591 hypothetical protein YP_003005517.1 3659188 R 561229 CDS YP_003005518.1 251790797 8120847 3659682..3660209 1 NC_012912.1 KEGG: mlo:mlr5488 hypothetical protein; hypothetical protein 3660209 8120847 Dd1591_3219 Dickeya zeae Ech1591 hypothetical protein YP_003005518.1 3659682 D 561229 CDS YP_003005519.1 251790798 8120848 complement(3660331..3660726) 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; KEGG: ccs:CCNA_03479 transcriptional regulator, MarR family; HxlR family transcriptional regulator 3660726 8120848 Dd1591_3220 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003005519.1 3660331 R 561229 CDS YP_003005520.1 251790799 8120849 3661419..3662666 1 NC_012912.1 KEGG: eca:ECA0549 putative plasmid transfer protein; putative plasmid transfer protein 3662666 8120849 Dd1591_3221 Dickeya zeae Ech1591 putative plasmid transfer protein YP_003005520.1 3661419 D 561229 CDS YP_003005521.1 251790800 8120850 complement(3662716..3665778) 1 NC_012912.1 PFAM: acriflavin resistance protein; KEGG: esa:ESA_pESA3p05444 hypothetical protein; acriflavin resistance protein 3665778 8120850 Dd1591_3222 Dickeya zeae Ech1591 acriflavin resistance protein YP_003005521.1 3662716 R 561229 CDS YP_003005522.1 251790801 8120851 complement(3665778..3666923) 1 NC_012912.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_0809 hypothetical protein; RND family efflux transporter MFP subunit 3666923 8120851 Dd1591_3223 Dickeya zeae Ech1591 RND family efflux transporter MFP subunit YP_003005522.1 3665778 R 561229 CDS YP_003005523.1 251790802 8120852 complement(3667047..3668216) 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: esa:ESA_pESA3p05442 hypothetical protein; histidine kinase 3668216 8120852 Dd1591_3224 Dickeya zeae Ech1591 histidine kinase YP_003005523.1 3667047 R 561229 CDS YP_003005524.1 251790803 8120853 complement(3668213..3668908) 1 NC_012912.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: kpe:KPK_2665 DNA-binding response regulator; winged helix family two component transcriptional regulator 3668908 8120853 Dd1591_3225 Dickeya zeae Ech1591 winged helix family two component transcriptional regulator YP_003005524.1 3668213 R 561229 CDS YP_003005525.1 251790804 8120854 3669050..3669835 1 NC_012912.1 PFAM: MltA-interacting MipA family protein; KEGG: esa:ESA_pESA3p05440 hypothetical protein; MltA-interacting MipA family protein 3669835 8120854 Dd1591_3226 Dickeya zeae Ech1591 MltA-interacting MipA family protein YP_003005525.1 3669050 D 561229 CDS YP_003005526.1 251790805 8120855 3670299..3671408 1 NC_012912.1 PFAM: Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3212 hypothetical protein; Male sterility domain-containing protein 3671408 8120855 Dd1591_3227 Dickeya zeae Ech1591 Male sterility domain-containing protein YP_003005526.1 3670299 D 561229 CDS YP_003005527.1 251790806 8120856 complement(3671528..3672355) 1 NC_012912.1 KEGG: aha:AHA_3054 hypothetical protein; hypothetical protein 3672355 8120856 Dd1591_3228 Dickeya zeae Ech1591 hypothetical protein YP_003005527.1 3671528 R 561229 CDS YP_003005528.1 251790807 8120857 3672870..3675131 1 NC_012912.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eca:ECA1009 biotin sulfoxide reductase; molybdopterin oxidoreductase 3675131 8120857 Dd1591_3229 Dickeya zeae Ech1591 molybdopterin oxidoreductase YP_003005528.1 3672870 D 561229 CDS YP_003005529.1 251790808 8120858 complement(3675206..3675739) 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: ecc:c3738 hypothetical protein; hypothetical protein 3675739 8120858 Dd1591_3230 Dickeya zeae Ech1591 hypothetical protein YP_003005529.1 3675206 R 561229 CDS YP_003005530.1 251790809 8120859 3676087..3677829 1 NC_012912.1 PFAM: Rhamnogalacturonate lyase; KEGG: eca:ECA0804 rhamnogalacturonate lyase; Rhamnogalacturonate lyase 3677829 8120859 Dd1591_3231 Dickeya zeae Ech1591 Rhamnogalacturonate lyase YP_003005530.1 3676087 D 561229 CDS YP_003005531.1 251790810 8120860 3677957..3678703 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: plu:plu0977 hypothetical protein; short-chain dehydrogenase/reductase SDR 3678703 8120860 Dd1591_3232 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005531.1 3677957 D 561229 CDS YP_003005532.1 251790811 8120861 3679206..3679820 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu1490 hypothetical protein; XRE family transcriptional regulator 3679820 8120861 Dd1591_3233 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003005532.1 3679206 D 561229 CDS YP_003005533.1 251790812 8120862 3679821..3680690 1 NC_012912.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: spe:Spro_4196 hypothetical protein; hypothetical protein 3680690 8120862 Dd1591_3234 Dickeya zeae Ech1591 hypothetical protein YP_003005533.1 3679821 D 561229 CDS YP_003005534.1 251790813 8120863 3680696..3681538 1 NC_012912.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3681538 queF 8120863 queF Dickeya zeae Ech1591 7-cyano-7-deazaguanine reductase YP_003005534.1 3680696 D 561229 CDS YP_003005535.1 251790814 8120864 complement(3681532..3682467) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azo:azo1247 LysR family transcriptional regulator; LysR family transcriptional regulator 3682467 8120864 Dd1591_3236 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005535.1 3681532 R 561229 CDS YP_003005536.1 251790815 8120865 3682588..3683673 1 NC_012912.1 KEGG: reh:H16_A0477 3-isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 3683673 8120865 Dd1591_3237 Dickeya zeae Ech1591 tartrate dehydrogenase YP_003005536.1 3682588 D 561229 CDS YP_003005537.1 251790816 8120866 complement(3683789..3684298) 1 NC_012912.1 KEGG: eca:ECA3786 hypothetical protein; hypothetical protein 3684298 8120866 Dd1591_3238 Dickeya zeae Ech1591 hypothetical protein YP_003005537.1 3683789 R 561229 CDS YP_003005538.1 251790817 8120867 3685637..3686830 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA0930 permease; major facilitator superfamily protein 3686830 8120867 Dd1591_3239 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005538.1 3685637 D 561229 CDS YP_003005539.1 251790818 8120868 3686974..3688269 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_03296 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein family 1 3688269 8120868 Dd1591_3240 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003005539.1 3686974 D 561229 CDS YP_003005540.1 251790819 8120869 3688328..3689200 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_03297 ABC-type sugar transport system, permease components; binding-protein-dependent transport systems inner membrane component 3689200 8120869 Dd1591_3241 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005540.1 3688328 D 561229 CDS YP_003005541.1 251790820 8120870 3689197..3690024 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_03298 ABC-type sugar transport system, permease component; binding-protein-dependent transport systems inner membrane component 3690024 8120870 Dd1591_3242 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005541.1 3689197 D 561229 CDS YP_003005542.1 251790821 8120871 3690034..3691140 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:RL0095 putative ATP-binding component of ABC transporter protein; ABC transporter 3691140 8120871 Dd1591_3243 Dickeya zeae Ech1591 ABC transporter YP_003005542.1 3690034 D 561229 CDS YP_003005543.1 251790822 8120872 3691130..3691897 1 NC_012912.1 KEGG: hch:HCH_04196 beta-lactamase superfamily hydrolase; beta-lactamase superfamily hydrolase 3691897 8120872 Dd1591_3244 Dickeya zeae Ech1591 beta-lactamase superfamily hydrolase YP_003005543.1 3691130 D 561229 CDS YP_003005544.1 251790823 8120873 3691890..3692876 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hch:HCH_03302 transcriptional regulator; LacI family transcriptional regulator 3692876 8120873 Dd1591_3245 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003005544.1 3691890 D 561229 CDS YP_003005545.1 251790824 8120874 complement(3692936..3693838) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0916 LysR family transcriptional regulator; LysR family transcriptional regulator 3693838 8120874 Dd1591_3246 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005545.1 3692936 R 561229 CDS YP_003005546.1 251790825 8120875 3694030..3695004 1 NC_012912.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; peptidase S15; KEGG: eca:ECA0915 hypothetical protein; alpha/beta hydrolase fold-3 domain-containing protein 3695004 8120875 Dd1591_3247 Dickeya zeae Ech1591 alpha/beta hydrolase fold-3 domain-containing protein YP_003005546.1 3694030 D 561229 CDS YP_003005547.1 251790826 8120876 3695672..3696370 1 NC_012912.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA0914 putative component of polysulfide reductase; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3696370 8120876 Dd1591_3248 Dickeya zeae Ech1591 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003005547.1 3695672 D 561229 CDS YP_003005548.1 251790827 8120877 3696363..3697319 1 NC_012912.1 TIGRFAM: cytochrome c nitrite reductase, NrfD subunit; PFAM: Polysulphide reductase NrfD; KEGG: eca:ECA0913 putative component of polysulfide reductase; cytochrome c nitrite reductase subunit NrfD 3697319 8120877 Dd1591_3249 Dickeya zeae Ech1591 cytochrome c nitrite reductase subunit NrfD YP_003005548.1 3696363 D 561229 CDS YP_003005549.1 251790828 8120878 3697322..3698695 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0912 hypothetical protein; major facilitator superfamily protein 3698695 8120878 Dd1591_3250 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005549.1 3697322 D 561229 CDS YP_003005550.1 251790829 8120879 3698752..3699096 1 NC_012912.1 PFAM: FMN-binding domain protein; KEGG: eca:ECA0911 hypothetical protein; FMN-binding domain-containing protein 3699096 8120879 Dd1591_3251 Dickeya zeae Ech1591 FMN-binding domain-containing protein YP_003005550.1 3698752 D 561229 CDS YP_003005551.1 251790830 8120880 3699159..3700730 1 NC_012912.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: eca:ECA0910 putative flavoprotein subunit of a reductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 3700730 8120880 Dd1591_3252 Dickeya zeae Ech1591 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_003005551.1 3699159 D 561229 CDS YP_003005552.1 251790831 8120881 complement(3700794..3701447) 1 NC_012912.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: eca:ECA0909 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 3701447 8120881 Dd1591_3253 Dickeya zeae Ech1591 2OG-Fe(II) oxygenase YP_003005552.1 3700794 R 561229 CDS YP_003005553.1 251790832 8120882 complement(3701803..3702792) 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 3702792 8120882 Dd1591_3254 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003005553.1 3701803 R 561229 CDS YP_003005554.1 251790833 8120883 3703149..3703823 1 NC_012912.1 KEGG: eca:ECA0907 putative DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; DNA-3-methyladenine glycosylase II 3703823 8120883 Dd1591_3255 Dickeya zeae Ech1591 DNA-3-methyladenine glycosylase II YP_003005554.1 3703149 D 561229 CDS YP_003005555.1 251790834 8120884 complement(3703892..3704356) 1 NC_012912.1 PFAM: transmembrane pair domain protein; KEGG: eca:ECA0906 hypothetical protein; transmembrane pair domain-containing protein 3704356 8120884 Dd1591_3256 Dickeya zeae Ech1591 transmembrane pair domain-containing protein YP_003005555.1 3703892 R 561229 CDS YP_003005556.1 251790835 8120885 3704463..3705329 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0905 LysR family transcriptional regulator; LysR family transcriptional regulator 3705329 8120885 Dd1591_3257 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005556.1 3704463 D 561229 CDS YP_003005557.1 251790836 8120886 3705759..3707402 1 NC_012912.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: eca:ECA0904 fumarate hydratase class I, aerobic; hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta 3707402 8120886 Dd1591_3258 Dickeya zeae Ech1591 hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta YP_003005557.1 3705759 D 561229 CDS YP_003005558.1 251790837 8120887 complement(3707449..3708975) 1 NC_012912.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcription regulator 3708975 8120887 Dd1591_3259 Dickeya zeae Ech1591 anaerobic nitric oxide reductase transcription regulator YP_003005558.1 3707449 R 561229 CDS YP_003005559.1 251790838 8120888 3709138..3710622 1 NC_012912.1 detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 3710622 8120888 Dd1591_3260 Dickeya zeae Ech1591 anaerobic nitric oxide reductase flavorubredoxin YP_003005559.1 3709138 D 561229 CDS YP_003005560.1 251790839 8120889 3710632..3711828 1 NC_012912.1 catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 3711828 8120889 Dd1591_3261 Dickeya zeae Ech1591 nitric oxide reductase YP_003005560.1 3710632 D 561229 CDS YP_003005561.1 251790840 8120890 3711949..3712812 1 NC_012912.1 with TehA confers resistance to tellurite; tellurite resistance protein TehB 3712812 8120890 Dd1591_3262 Dickeya zeae Ech1591 tellurite resistance protein TehB YP_003005561.1 3711949 D 561229 CDS YP_003005562.1 251790841 8120891 complement(3712917..3713570) 1 NC_012912.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3713570 ribB 8120891 ribB Dickeya zeae Ech1591 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_003005562.1 3712917 R 561229 CDS YP_003005563.1 251790842 8120892 3714020..3714304 1 NC_012912.1 PFAM: protein of unknown function DUF526; KEGG: spe:Spro_4287 hypothetical protein; hypothetical protein 3714304 8120892 Dd1591_3264 Dickeya zeae Ech1591 hypothetical protein YP_003005563.1 3714020 D 561229 CDS YP_003005564.1 251790843 8120893 complement(3714360..3715613) 1 NC_012912.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH 3715613 8120893 Dd1591_3265 Dickeya zeae Ech1591 inner membrane protein YjeH YP_003005564.1 3714360 R 561229 CDS YP_003005565.1 251790844 8120894 complement(3715776..3716702) 1 NC_012912.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 3716702 8120894 Dd1591_3266 Dickeya zeae Ech1591 cell division protein ZipA YP_003005565.1 3715776 R 561229 CDS YP_003005566.1 251790845 8120895 3716926..3717696 1 NC_012912.1 PFAM: protein of unknown function DUF540; KEGG: eca:ECA0895 putative sulfate transport protein CysZ; hypothetical protein 3717696 8120895 Dd1591_3267 Dickeya zeae Ech1591 hypothetical protein YP_003005566.1 3716926 D 561229 CDS YP_003005567.1 251790846 8120896 3717873..3718841 1 NC_012912.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 3718841 8120896 Dd1591_3268 Dickeya zeae Ech1591 cysteine synthase A YP_003005567.1 3717873 D 561229 CDS YP_003005568.1 251790847 8120897 3719247..3719504 1 NC_012912.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: eum:ECUMN_2737 phosphohistidinoprotein-hexose phosphotransferase component of PTS system (HPr); PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr 3719504 8120897 Dd1591_3269 Dickeya zeae Ech1591 PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr YP_003005568.1 3719247 D 561229 CDS YP_003005569.1 251790848 8120898 3719552..3721279 1 NC_012912.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 3721279 8120898 Dd1591_3270 Dickeya zeae Ech1591 phosphoenolpyruvate-protein phosphotransferase YP_003005569.1 3719552 D 561229 CDS YP_003005570.1 251790849 8120899 3721321..3721830 1 NC_012912.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter subunit 3721830 8120899 Dd1591_3271 Dickeya zeae Ech1591 PTS system glucose-specific transporter subunit YP_003005570.1 3721321 D 561229 CDS YP_003005571.1 251790850 8120900 complement(3722098..3722658) 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; KEGG: gbe:GbCGDNIH1_1161 transcriptional regulator, MarR family; HxlR family transcriptional regulator 3722658 8120900 Dd1591_3272 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003005571.1 3722098 R 561229 CDS YP_003005572.1 251790851 8120901 3723194..3724159 1 NC_012912.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pae:PA2841 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 3724159 8120901 Dd1591_3273 Dickeya zeae Ech1591 Enoyl-CoA hydratase/isomerase YP_003005572.1 3723194 D 561229 CDS YP_003005573.1 251790852 8120902 complement(3724263..3725660) 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_3451 integral membrane sensor signal transduction histidine kinase; histidine kinase 3725660 8120902 Dd1591_3274 Dickeya zeae Ech1591 histidine kinase YP_003005573.1 3724263 R 561229 CDS YP_003005574.1 251790853 8120903 complement(3725663..3726361) 1 NC_012912.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0889 two-component system response regulator; winged helix family two component transcriptional regulator 3726361 8120903 Dd1591_3275 Dickeya zeae Ech1591 winged helix family two component transcriptional regulator YP_003005574.1 3725663 R 561229 CDS YP_003005575.1 251790854 8120905 complement(3727013..3727894) 1 NC_012912.1 TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: eca:ECA0886 cysteine synthase B; cysteine synthase B 3727894 8120905 Dd1591_3277 Dickeya zeae Ech1591 cysteine synthase B YP_003005575.1 3727013 R 561229 CDS YP_003005576.1 251790855 8120906 complement(3727983..3728882) 1 NC_012912.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: eca:ECA0882 hypothetical protein; Dyp-type peroxidase family 3728882 8120906 Dd1591_3278 Dickeya zeae Ech1591 Dyp-type peroxidase family YP_003005576.1 3727983 R 561229 CDS YP_003005577.1 251790856 8120907 complement(3729106..3730401) 1 NC_012912.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: eca:ECA0932 permease; cytosine/purines uracil thiamine allantoin permease 3730401 8120907 Dd1591_3279 Dickeya zeae Ech1591 cytosine/purines uracil thiamine allantoin permease YP_003005577.1 3729106 R 561229 CDS YP_003005578.1 251790857 8120908 complement(3730417..3731106) 1 NC_012912.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: eca:ECA0933 LuxR family transcriptional regulator; LuxR family transcriptional regulator 3731106 8120908 Dd1591_3280 Dickeya zeae Ech1591 LuxR family transcriptional regulator YP_003005578.1 3730417 R 561229 CDS YP_003005579.1 251790858 8120909 complement(3731142..3731555) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0934 putative acetyltransferase; GCN5-related N-acetyltransferase 3731555 8120909 Dd1591_3281 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005579.1 3731142 R 561229 CDS YP_003005580.1 251790859 8120910 3731930..3732217 1 NC_012912.1 KEGG: eca:ECA0686 sugar fermentation stimulation protein; putative transcriptional regulator Nlp 3732217 8120910 Dd1591_3282 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003005580.1 3731930 D 561229 CDS YP_003005581.1 251790860 8120911 complement(3732307..3733581) 1 NC_012912.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: eca:ECA3379 putative glycosyltransferase; glycosyltransferase, MGT family 3733581 8120911 Dd1591_3283 Dickeya zeae Ech1591 glycosyltransferase, MGT family YP_003005581.1 3732307 R 561229 CDS YP_003005582.1 251790861 8120912 complement(3734018..3734626) 1 NC_012912.1 PFAM: protein of unknown function DUF1131; KEGG: eca:ECA0881 hypothetical protein; hypothetical protein 3734626 8120912 Dd1591_3284 Dickeya zeae Ech1591 hypothetical protein YP_003005582.1 3734018 R 561229 CDS YP_003005583.1 251790862 8120913 complement(3734870..3736531) 1 NC_012912.1 PFAM: ABC transporter domain protein; ABC transporter related; SbmABacA family protein; SMART: AAA ATPase; KEGG: eca:ECA0880 putative ABC transporter ATP-binding protein; ABC transporter 3736531 8120913 Dd1591_3285 Dickeya zeae Ech1591 ABC transporter YP_003005583.1 3734870 R 561229 CDS YP_003005584.1 251790863 8119021 complement(3736528..3739269) 1 NC_012912.1 PFAM: peptidase M16 domain protein; KEGG: eca:ECA0879 putative zinc protease; peptidase M16 domain-containing protein 3739269 8119021 Dd1591_3286 Dickeya zeae Ech1591 peptidase M16 domain-containing protein YP_003005584.1 3736528 R 561229 CDS YP_003005585.1 251790864 8119022 complement(3739402..3741972) 1 NC_012912.1 PFAM: TonB-dependent receptor plug; KEGG: eca:ECA0878 hypothetical protein; TonB-dependent receptor plug 3741972 8119022 Dd1591_3287 Dickeya zeae Ech1591 TonB-dependent receptor plug YP_003005585.1 3739402 R 561229 CDS YP_003005586.1 251790865 8119023 complement(3742032..3742616) 1 NC_012912.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: eca:ECA0877 TonB-like protein; TonB family protein 3742616 8119023 Dd1591_3288 Dickeya zeae Ech1591 TonB family protein YP_003005586.1 3742032 R 561229 CDS YP_003005587.1 251790866 8119024 complement(3743244..3743669) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0875 putative acetyltransferase; putative acetyltransferase 3743669 8119024 Dd1591_3289 Dickeya zeae Ech1591 putative acetyltransferase YP_003005587.1 3743244 R 561229 CDS YP_003005588.1 251790867 8119025 3743869..3744807 1 NC_012912.1 PFAM: coproporphyrinogen III oxidase; KEGG: eca:ECA0874 coproporphyrinogen III oxidase; Coproporphyrinogen oxidase 3744807 8119025 Dd1591_3290 Dickeya zeae Ech1591 Coproporphyrinogen oxidase YP_003005588.1 3743869 D 561229 CDS YP_003005589.1 251790868 8119026 3744804..3745256 1 NC_012912.1 PFAM: protein of unknown function DUF188; KEGG: spe:Spro_3465 hypothetical protein; hypothetical protein 3745256 8119026 Dd1591_3291 Dickeya zeae Ech1591 hypothetical protein YP_003005589.1 3744804 D 561229 CDS YP_003005590.1 251790869 8119027 complement(3745323..3747602) 1 NC_012912.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3747602 8119027 Dd1591_3292 Dickeya zeae Ech1591 malic enzyme YP_003005590.1 3745323 R 561229 CDS YP_003005591.1 251790870 8119029 complement(3748424..3749008) 1 NC_012912.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA0847 putative MutT/NUDIX family protein; NUDIX hydrolase 3749008 8119029 Dd1591_3294 Dickeya zeae Ech1591 NUDIX hydrolase YP_003005591.1 3748424 R 561229 CDS YP_003005592.1 251790871 8119030 complement(3749156..3750391) 1 NC_012912.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: eca:ECA0843 manganese transport protein MntH; manganese transport protein MntH 3750391 8119030 Dd1591_3295 Dickeya zeae Ech1591 manganese transport protein MntH YP_003005592.1 3749156 R 561229 CDS YP_003005593.1 251790872 8119031 complement(3750757..3751344) 1 NC_012912.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 3751344 8119031 Dd1591_3296 Dickeya zeae Ech1591 heat shock protein GrpE YP_003005593.1 3750757 R 561229 CDS YP_003005594.1 251790873 8119032 3751498..3752376 1 NC_012912.1 PFAM: ATP-NAD/AcoX kinase; KEGG: eca:ECA0841 inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase 3752376 8119032 Dd1591_3297 Dickeya zeae Ech1591 ATP-NAD/AcoX kinase YP_003005594.1 3751498 D 561229 CDS YP_003005595.1 251790874 8119033 3752460..3754121 1 NC_012912.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: eca:ECA0840 recombination and repair protein; recombination and repair protein 3754121 8119033 Dd1591_3298 Dickeya zeae Ech1591 recombination and repair protein YP_003005595.1 3752460 D 561229 CDS YP_003005596.1 251790875 8119034 3754233..3754577 1 NC_012912.1 PFAM: SmpA/OmlA domain protein; KEGG: eca:ECA0839 hypothetical protein; hypothetical protein 3754577 8119034 Dd1591_3299 Dickeya zeae Ech1591 hypothetical protein YP_003005596.1 3754233 D 561229 CDS YP_003005597.1 251790876 8119035 complement(3754633..3754926) 1 NC_012912.1 PFAM: protein of unknown function UPF0125; KEGG: sgl:SG1802 hypothetical protein; hypothetical protein 3754926 8119035 Dd1591_3300 Dickeya zeae Ech1591 hypothetical protein YP_003005597.1 3754633 R 561229 CDS YP_003005598.1 251790877 8119036 complement(3754919..3755353) 1 NC_012912.1 PFAM: cyclase/dehydrase; KEGG: eca:ECA0837 hypothetical protein; cyclase/dehydrase 3755353 8119036 Dd1591_3301 Dickeya zeae Ech1591 cyclase/dehydrase YP_003005598.1 3754919 R 561229 CDS YP_003005599.1 251790878 8119037 3755509..3755991 1 NC_012912.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: cko:CKO_03942 hypothetical protein; SsrA-binding protein 3755991 8119037 Dd1591_3302 Dickeya zeae Ech1591 SsrA-binding protein YP_003005599.1 3755509 D 561229 CDS YP_003005600.1 251790879 8119039 complement(3757269..3758462) 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: sfx:S4808 hypothetical protein; transposase IS4 family protein 3758462 8119039 Dd1591_3303 Dickeya zeae Ech1591 transposase IS4 family protein YP_003005600.1 3757269 R 561229 CDS YP_003005601.1 251790880 8119040 3759192..3759590 1 NC_012912.1 hypothetical protein 3759590 8119040 Dd1591_3304 Dickeya zeae Ech1591 hypothetical protein YP_003005601.1 3759192 D 561229 CDS YP_003005602.1 251790881 8119041 3759745..3760506 1 NC_012912.1 KEGG: smd:Smed_1902 hypothetical protein; hypothetical protein 3760506 8119041 Dd1591_3305 Dickeya zeae Ech1591 hypothetical protein YP_003005602.1 3759745 D 561229 CDS YP_003005603.1 251790882 8119042 complement(3760659..3761576) 1 NC_012912.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA1499 pectin lyase; pectate lyase/Amb allergen 3761576 8119042 Dd1591_3306 Dickeya zeae Ech1591 pectate lyase/Amb allergen YP_003005603.1 3760659 R 561229 CDS YP_003005604.1 251790883 8119043 complement(3761588..3762049) 1 NC_012912.1 KEGG: ilo:IL2017 type II secretory pathway, component PulM; hypothetical protein 3762049 8119043 Dd1591_3307 Dickeya zeae Ech1591 hypothetical protein YP_003005604.1 3761588 R 561229 CDS YP_003005605.1 251790884 8119044 complement(3762046..3763221) 1 NC_012912.1 KEGG: vvy:VV0222 type II secretory pathway, component EpsL; Type II secretory pathway component PulL-like protein 3763221 8119044 Dd1591_3308 Dickeya zeae Ech1591 Type II secretory pathway component PulL-like protein YP_003005605.1 3762046 R 561229 CDS YP_003005606.1 251790885 8119045 complement(3763211..3764122) 1 NC_012912.1 KEGG: spe:Spro_4244 general secretion pathway protein K; hypothetical protein 3764122 8119045 Dd1591_3309 Dickeya zeae Ech1591 hypothetical protein YP_003005606.1 3763211 R 561229 CDS YP_003005607.1 251790886 8119046 complement(3764119..3764664) 1 NC_012912.1 KEGG: ecf:ECH74115_B0009 general secretion pathway protein J; Type II secretory pathway component PulJ-like protein 3764664 8119046 Dd1591_3310 Dickeya zeae Ech1591 Type II secretory pathway component PulJ-like protein YP_003005607.1 3764119 R 561229 CDS YP_003005608.1 251790887 8119047 complement(3764661..3765035) 1 NC_012912.1 PFAM: type II secretion system protein I/J; KEGG: hha:Hhal_2374 general secretion pathway protein I; type II secretion system protein I/J 3765035 8119047 Dd1591_3311 Dickeya zeae Ech1591 type II secretion system protein I/J YP_003005608.1 3764661 R 561229 CDS YP_003005609.1 251790888 8119048 complement(3765071..3765487) 1 NC_012912.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: ilo:IL2023 type II secretory pathway, pseudopilin PulG; general secretion pathway protein G 3765487 8119048 Dd1591_3312 Dickeya zeae Ech1591 general secretion pathway protein G YP_003005609.1 3765071 R 561229 CDS YP_003005610.1 251790889 8119049 complement(3765507..3766712) 1 NC_012912.1 PFAM: type II secretion system protein; KEGG: eca:ECA3107 general secretion pathway protein F; type II secretion system protein 3766712 8119049 Dd1591_3313 Dickeya zeae Ech1591 type II secretion system protein YP_003005610.1 3765507 R 561229 CDS YP_003005611.1 251790890 8119050 complement(3766705..3768180) 1 NC_012912.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: aha:AHA_0570 general secretory pathway protein E; type II secretion system protein E 3768180 8119050 Dd1591_3314 Dickeya zeae Ech1591 type II secretion system protein E YP_003005611.1 3766705 R 561229 CDS YP_003005612.1 251790891 8119051 complement(3768180..3770270) 1 NC_012912.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: kpe:KPK_4576 pullulanase secretion envelope protein PulD; general secretion pathway protein D 3770270 8119051 Dd1591_3315 Dickeya zeae Ech1591 general secretion pathway protein D YP_003005612.1 3768180 R 561229 CDS YP_003005613.1 251790892 8119052 complement(3770286..3770792) 1 NC_012912.1 KEGG: spe:Spro_4252 hypothetical protein; hypothetical protein 3770792 8119052 Dd1591_3316 Dickeya zeae Ech1591 hypothetical protein YP_003005613.1 3770286 R 561229 CDS YP_003005614.1 251790893 8119053 complement(3771600..3773009) 1 NC_012912.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mxa:MXAN_6804 MATE efflux family protein; MATE efflux family protein 3773009 8119053 Dd1591_3317 Dickeya zeae Ech1591 MATE efflux family protein YP_003005614.1 3771600 R 561229 CDS YP_003005615.1 251790894 8119054 complement(3773042..3774520) 1 NC_012912.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_3443 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system, outer membrane lipoprotein, NodT family 3774520 8119054 Dd1591_3318 Dickeya zeae Ech1591 RND efflux system, outer membrane lipoprotein, NodT family YP_003005615.1 3773042 R 561229 CDS YP_003005616.1 251790895 8119055 3774646..3775263 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_3444 transcriptional regulator, TetR family; TetR family transcriptional regulator 3775263 8119055 Dd1591_3319 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003005616.1 3774646 D 561229 CDS YP_003005617.1 251790896 8119056 3775357..3776472 1 NC_012912.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3445 secretion protein HlyD; RND family efflux transporter MFP subunit 3776472 8119056 Dd1591_3320 Dickeya zeae Ech1591 RND family efflux transporter MFP subunit YP_003005617.1 3775357 D 561229 CDS YP_003005618.1 251790897 8119057 3776469..3779534 1 NC_012912.1 PFAM: acriflavin resistance protein; KEGG: xfa:XF2083 cation efflux system protein; acriflavin resistance protein 3779534 8119057 Dd1591_3321 Dickeya zeae Ech1591 acriflavin resistance protein YP_003005618.1 3776469 D 561229 CDS YP_003005619.1 251790898 8119058 3779578..3780384 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: bch:Bcen2424_6530 short chain dehydrogenase; short chain dehydrogenase 3780384 8119058 Dd1591_3322 Dickeya zeae Ech1591 short chain dehydrogenase YP_003005619.1 3779578 D 561229 CDS YP_003005620.1 251790899 8119059 3780427..3781713 1 NC_012912.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 3781713 8119059 Dd1591_3323 Dickeya zeae Ech1591 3-oxoacyl-(acyl carrier protein) synthase II YP_003005620.1 3780427 D 561229 CDS YP_003005621.1 251790900 8119060 3781814..3782635 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr1595 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3782635 8119060 Dd1591_3324 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005621.1 3781814 D 561229 CDS YP_003005622.1 251790901 8119061 complement(3782854..3783240) 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; KEGG: rso:RSc0210 hypothetical protein; HxlR family transcriptional regulator 3783240 8119061 Dd1591_3325 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003005622.1 3782854 R 561229 CDS YP_003005623.1 251790902 8119062 3783322..3783729 1 NC_012912.1 KEGG: rso:RSc0209 hypothetical protein; hypothetical protein 3783729 8119062 Dd1591_3326 Dickeya zeae Ech1591 hypothetical protein YP_003005623.1 3783322 D 561229 CDS YP_003005624.1 251790903 8119063 3783786..3784421 1 NC_012912.1 KEGG: ret:RHE_PC00048 hypothetical protein; hypothetical protein 3784421 8119063 Dd1591_3327 Dickeya zeae Ech1591 hypothetical protein YP_003005624.1 3783786 D 561229 CDS YP_003005625.1 251790904 8119064 3784909..3785691 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0828 putative amino acid-binding periplasmic protein; extracellular solute-binding protein family 3 3785691 8119064 Dd1591_3328 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003005625.1 3784909 D 561229 CDS YP_003005626.1 251790905 8119065 complement(3786409..3787341) 1 NC_012912.1 KEGG: dar:Daro_3104 hypothetical protein; hypothetical protein 3787341 8119065 Dd1591_3329 Dickeya zeae Ech1591 hypothetical protein YP_003005626.1 3786409 R 561229 CDS YP_003005627.1 251790906 8119066 3787560..3788705 1 NC_012912.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B 3788705 8119066 Dd1591_3330 Dickeya zeae Ech1591 murein hydrolase B YP_003005627.1 3787560 D 561229 CDS YP_003005628.1 251790907 8119067 3789049..3790038 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sea:SeAg_B4544 invertase; transposase IS116/IS110/IS902 family protein 3790038 8119067 Dd1591_3331 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003005628.1 3789049 D 561229 CDS YP_003005629.1 251790908 8119068 complement(3790308..3791135) 1 NC_012912.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: eca:ECA1465 hypothetical protein; Myo-inositol catabolism IolB domain-containing protein 3791135 8119068 Dd1591_3332 Dickeya zeae Ech1591 Myo-inositol catabolism IolB domain-containing protein YP_003005629.1 3790308 R 561229 CDS YP_003005630.1 251790909 8119069 complement(3791158..3792048) 1 NC_012912.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eca:ECA1464 putative myo-inositol catabolism protein; Myo-inosose-2 dehydratase 3792048 8119069 Dd1591_3333 Dickeya zeae Ech1591 Myo-inosose-2 dehydratase YP_003005630.1 3791158 R 561229 CDS YP_003005631.1 251790910 8119070 complement(3792080..3794023) 1 NC_012912.1 PFAM: PfkB domain protein; KEGG: eca:ECA1463 putative carbohydrate kinase; PfkB domain-containing protein 3794023 8119070 Dd1591_3334 Dickeya zeae Ech1591 PfkB domain-containing protein YP_003005631.1 3792080 R 561229 CDS YP_003005632.1 251790911 8119071 complement(3794096..3795229) 1 NC_012912.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eca:ECA1462 oxidoreductase; oxidoreductase domain-containing protein 3795229 8119071 Dd1591_3335 Dickeya zeae Ech1591 oxidoreductase domain-containing protein YP_003005632.1 3794096 R 561229 CDS YP_003005633.1 251790912 8119072 complement(3795247..3796287) 1 NC_012912.1 PFAM: inner-membrane translocator; KEGG: eca:ECA1461 putative sugar ABC transporter, permease protein; inner-membrane translocator 3796287 8119072 Dd1591_3336 Dickeya zeae Ech1591 inner-membrane translocator YP_003005633.1 3795247 R 561229 CDS YP_003005634.1 251790913 8119073 complement(3796298..3797863) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cko:CKO_03989 hypothetical protein; ABC transporter 3797863 8119073 Dd1591_3337 Dickeya zeae Ech1591 ABC transporter YP_003005634.1 3796298 R 561229 CDS YP_003005635.1 251790914 8119074 complement(3797902..3798840) 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1459 putative sugar ABC transporter, periplasmic protein; periplasmic binding protein/LacI transcriptional regulator 3798840 8119074 Dd1591_3338 Dickeya zeae Ech1591 periplasmic binding protein/LacI transcriptional regulator YP_003005635.1 3797902 R 561229 CDS YP_003005636.1 251790915 8119075 complement(3798925..3799911) 1 NC_012912.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eca:ECA1458 putative myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein 3799911 8119075 Dd1591_3339 Dickeya zeae Ech1591 oxidoreductase domain-containing protein YP_003005636.1 3798925 R 561229 CDS YP_003005637.1 251790916 8119076 3800474..3801223 1 NC_012912.1 SMART: AAA ATPase; KEGG: rme:Rmet_4896 SMC protein-like protein; AAA ATPase 3801223 8119076 Dd1591_3340 Dickeya zeae Ech1591 AAA ATPase YP_003005637.1 3800474 D 561229 CDS YP_003005638.1 251790917 8119077 3801296..3801586 1 NC_012912.1 hypothetical protein 3801586 8119077 Dd1591_3341 Dickeya zeae Ech1591 hypothetical protein YP_003005638.1 3801296 D 561229 CDS YP_003005639.1 251790918 8119078 complement(3801771..3803702) 1 NC_012912.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cko:CKO_03993 hypothetical protein; thiamine pyrophosphate protein domain-containing protein TPP-binding 3803702 8119078 Dd1591_3342 Dickeya zeae Ech1591 thiamine pyrophosphate protein domain-containing protein TPP-binding YP_003005639.1 3801771 R 561229 CDS YP_003005640.1 251790919 8119079 complement(3803730..3805241) 1 NC_012912.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: eca:ECA1456 putative aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 3805241 8119079 Dd1591_3343 Dickeya zeae Ech1591 methylmalonate-semialdehyde dehydrogenase YP_003005640.1 3803730 R 561229 CDS YP_003005641.1 251790920 8119080 3805552..3806409 1 NC_012912.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: eca:ECA1455 putative transcriptional regulator; RpiR family transcriptional regulator 3806409 8119080 Dd1591_3344 Dickeya zeae Ech1591 RpiR family transcriptional regulator YP_003005641.1 3805552 D 561229 CDS YP_003005642.1 251790921 8119081 3806757..3807857 1 NC_012912.1 KEGG: yen:YE3211 D-alanine--D-alanine ligase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; D-alanine/D-alanine ligase 3807857 8119081 Dd1591_3345 Dickeya zeae Ech1591 D-alanine/D-alanine ligase YP_003005642.1 3806757 D 561229 CDS YP_003005643.1 251790922 8119082 complement(3807904..3808188) 1 NC_012912.1 PFAM: YCII-related; KEGG: yen:YE1740 hypothetical protein; YCII-like protein 3808188 8119082 Dd1591_3346 Dickeya zeae Ech1591 YCII-like protein YP_003005643.1 3807904 R 561229 CDS YP_003005644.1 251790923 8119083 complement(3808203..3808598) 1 NC_012912.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_4729 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 3808598 8119083 Dd1591_3347 Dickeya zeae Ech1591 Glyoxalase/bleomycin resistance protein/dioxygenase YP_003005644.1 3808203 R 561229 CDS YP_003005645.1 251790924 8119084 3808735..3809223 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2951 acetyltransferase; GCN5-related N-acetyltransferase 3809223 8119084 Dd1591_3348 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005645.1 3808735 D 561229 CDS YP_003005646.1 251790925 8119085 3809294..3809533 1 NC_012912.1 PFAM: DinI family protein; KEGG: yen:YE1408 putative stress response protein; DinI family protein 3809533 8119085 Dd1591_3349 Dickeya zeae Ech1591 DinI family protein YP_003005646.1 3809294 D 561229 CDS YP_003005647.1 251790926 8119086 3809967..3811400 1 NC_012912.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03424 putative permease; sugar (Glycoside-Pentoside-Hexuronide) transporter 3811400 8119086 Dd1591_3350 Dickeya zeae Ech1591 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_003005647.1 3809967 D 561229 CDS YP_003005648.1 251790927 8119087 3811518..3813086 1 NC_012912.1 PFAM: glycoside hydrolase family 43; KEGG: kpn:KPN_03423 putative glycoside hydrolase; glycoside hydrolase family 43 3813086 8119087 Dd1591_3351 Dickeya zeae Ech1591 glycoside hydrolase family 43 YP_003005648.1 3811518 D 561229 CDS YP_003005649.1 251790928 8119088 complement(3813216..3813941) 1 NC_012912.1 KEGG: esa:ESA_01748 hypothetical protein; hypothetical protein 3813941 8119088 Dd1591_3352 Dickeya zeae Ech1591 hypothetical protein YP_003005649.1 3813216 R 561229 CDS YP_003005650.1 251790929 8119089 complement(3814066..3814611) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmy:Pmen_1643 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 3814611 8119089 Dd1591_3353 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005650.1 3814066 R 561229 CDS YP_003005651.1 251790930 8119090 complement(3814761..3815183) 1 NC_012912.1 KEGG: eca:ECA0825 hypothetical protein; hypothetical protein 3815183 8119090 Dd1591_3354 Dickeya zeae Ech1591 hypothetical protein YP_003005651.1 3814761 R 561229 CDS YP_003005652.1 251790931 8119091 3815752..3819285 1 NC_012912.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA0824 pyruvate-flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 3819285 8119091 Dd1591_3355 Dickeya zeae Ech1591 pyruvate ferredoxin/flavodoxin oxidoreductase YP_003005652.1 3815752 D 561229 CDS YP_003005653.1 251790932 8119093 3819924..3821000 1 NC_012912.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eca:ECA0821 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3821000 8119093 Dd1591_3357 Dickeya zeae Ech1591 ErfK/YbiS/YcfS/YnhG family protein YP_003005653.1 3819924 D 561229 CDS YP_003005654.1 251790933 8119094 complement(3821181..3821915) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_7127 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 3821915 8119094 Dd1591_3358 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005654.1 3821181 R 561229 CDS YP_003005655.1 251790934 8119096 3822392..3822847 1 NC_012912.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bpt:Bpet2973 MarR family transcriptional regulator; MarR family transcriptional regulator 3822847 8119096 Dd1591_3360 Dickeya zeae Ech1591 MarR family transcriptional regulator YP_003005655.1 3822392 D 561229 CDS YP_003005656.1 251790935 8119097 3822844..3823965 1 NC_012912.1 PFAM: secretion protein HlyD family protein; KEGG: maq:Maqu_0618 secretion protein HlyD family protein; secretion protein HlyD family protein 3823965 8119097 Dd1591_3361 Dickeya zeae Ech1591 secretion protein HlyD family protein YP_003005656.1 3822844 D 561229 CDS YP_003005657.1 251790936 8119098 3823952..3825571 1 NC_012912.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: maq:Maqu_0617 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 3825571 8119098 Dd1591_3362 Dickeya zeae Ech1591 EmrB/QacA subfamily drug resistance transporter YP_003005657.1 3823952 D 561229 CDS YP_003005658.1 251790937 8119099 3825673..3827169 1 NC_012912.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0819 putative D-mannonate oxidoreductase; Fructuronate reductase 3827169 8119099 Dd1591_3363 Dickeya zeae Ech1591 Fructuronate reductase YP_003005658.1 3825673 D 561229 CDS YP_003005659.1 251790938 8119100 complement(3827400..3827720) 1 NC_012912.1 SMART: helix-turn-helix domain protein; KEGG: xau:Xaut_0314 XRE family transcriptional regulator; XRE family transcriptional regulator 3827720 8119100 Dd1591_3364 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003005659.1 3827400 R 561229 CDS YP_003005660.1 251790939 8119901 3828075..3829601 1 NC_012912.1 KEGG: eca:ECA0817 oligogalacturonide transporter; oligogalacturonide transporter 3829601 8119901 Dd1591_3365 Dickeya zeae Ech1591 oligogalacturonide transporter YP_003005660.1 3828075 D 561229 CDS YP_003005661.1 251790940 8119902 complement(3830144..3831154) 1 NC_012912.1 KEGG: eca:ECA0815 hypothetical protein; hypothetical protein 3831154 8119902 Dd1591_3366 Dickeya zeae Ech1591 hypothetical protein YP_003005661.1 3830144 R 561229 CDS YP_003005662.1 251790941 8119903 complement(3831835..3832641) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4072 ABC transporter ATP-binding protein; ABC transporter 3832641 8119903 Dd1591_3367 Dickeya zeae Ech1591 ABC transporter YP_003005662.1 3831835 R 561229 CDS YP_003005663.1 251790942 8119904 complement(3832651..3833544) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4073 ABC transporter ATP binding protein; ABC transporter 3833544 8119904 Dd1591_3368 Dickeya zeae Ech1591 ABC transporter YP_003005663.1 3832651 R 561229 CDS YP_003005664.1 251790943 8119905 complement(3833516..3834421) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4074 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 3834421 8119905 Dd1591_3369 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005664.1 3833516 R 561229 CDS YP_003005665.1 251790944 8119906 complement(3834418..3835476) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4075 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 3835476 8119906 Dd1591_3370 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005665.1 3834418 R 561229 CDS YP_003005666.1 251790945 8119907 complement(3835562..3837172) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4076 ABC transporter, substrate binding protein; extracellular solute-binding protein family 5 3837172 8119907 Dd1591_3371 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003005666.1 3835562 R 561229 CDS YP_003005667.1 251790946 8119908 complement(3837253..3838407) 1 NC_012912.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA4077 putative mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 3838407 8119908 Dd1591_3372 Dickeya zeae Ech1591 mandelate racemase/muconate lactonizing protein YP_003005667.1 3837253 R 561229 CDS YP_003005668.1 251790947 8119909 3838476..3838733 1 NC_012912.1 KEGG: ypy:YPK_0408 hypothetical protein; hypothetical protein 3838733 8119909 Dd1591_3373 Dickeya zeae Ech1591 hypothetical protein YP_003005668.1 3838476 D 561229 CDS YP_003005669.1 251790948 8119910 complement(3839619..3840011) 1 NC_012912.1 KEGG: eca:ECA0809 global regulatory protein; global regulatory protein 3840011 8119910 Dd1591_3374 Dickeya zeae Ech1591 global regulatory protein YP_003005669.1 3839619 R 561229 CDS YP_003005670.1 251790949 8119911 3840766..3842727 1 NC_012912.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 3842727 8119911 Dd1591_3375 Dickeya zeae Ech1591 acetyl-CoA synthetase YP_003005670.1 3840766 D 561229 CDS YP_003005671.1 251790950 8119912 3842848..3843159 1 NC_012912.1 PFAM: protein of unknown function DUF485; KEGG: eca:ECA0807 hypothetical protein; hypothetical protein 3843159 8119912 Dd1591_3376 Dickeya zeae Ech1591 hypothetical protein YP_003005671.1 3842848 D 561229 CDS YP_003005672.1 251790951 8119913 3843156..3844814 1 NC_012912.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 3844814 actP 8119913 actP Dickeya zeae Ech1591 acetate permease YP_003005672.1 3843156 D 561229 CDS YP_003005673.1 251790952 8119914 complement(3844866..3846512) 1 NC_012912.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: eca:ECA0784 putative sodium/hydrogen antiporter; Na+/H+ antiporter 3846512 8119914 Dd1591_3378 Dickeya zeae Ech1591 Na+/H+ antiporter YP_003005673.1 3844866 R 561229 CDS YP_003005674.1 251790953 8119915 complement(3846721..3848088) 1 NC_012912.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: eca:ECA0783 putative permease; Xanthine/uracil/vitamin C permease 3848088 8119915 Dd1591_3379 Dickeya zeae Ech1591 Xanthine/uracil/vitamin C permease YP_003005674.1 3846721 R 561229 CDS YP_003005675.1 251790954 8119916 complement(3848924..3849844) 1 NC_012912.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 3849844 8119916 Dd1591_3380 Dickeya zeae Ech1591 lipid A biosynthesis palmitoleoyl acyltransferase YP_003005675.1 3848924 R 561229 CDS YP_003005676.1 251790955 8119917 complement(3850098..3850526) 1 NC_012912.1 PFAM: TOBE domain protein; KEGG: cko:CKO_04088 hypothetical protein; TOBE domain-containing protein 3850526 8119917 Dd1591_3381 Dickeya zeae Ech1591 TOBE domain-containing protein YP_003005676.1 3850098 R 561229 CDS YP_003005677.1 251790956 8119918 3850796..3851668 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_04682 putative sn-glycerol-3-phosphate transport system permease; binding-protein-dependent transport systems inner membrane component 3851668 8119918 Dd1591_3382 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005677.1 3850796 D 561229 CDS YP_003005678.1 251790957 8119919 3851658..3852545 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_04681 putative sn-glycerol-3-phosphate transport system permease; binding-protein-dependent transport systems inner membrane component 3852545 8119919 Dd1591_3383 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005678.1 3851658 D 561229 CDS YP_003005679.1 251790958 8119920 3852556..3853377 1 NC_012912.1 PFAM: metallophosphoesterase; KEGG: kpn:KPN_04680 putative phosphohydrolase; metallophosphoesterase 3853377 8119920 Dd1591_3384 Dickeya zeae Ech1591 metallophosphoesterase YP_003005679.1 3852556 D 561229 CDS YP_003005680.1 251790959 8119921 3853377..3854462 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: kpe:KPK_4986 sugar ABC transporter, ATP-binding protein; ABC transporter 3854462 8119921 Dd1591_3385 Dickeya zeae Ech1591 ABC transporter YP_003005680.1 3853377 D 561229 CDS YP_003005681.1 251790960 8119922 3854455..3855777 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpe:KPK_4987 ABC transporter, periplasmic substrate-binding protein; extracellular solute-binding protein family 1 3855777 8119922 Dd1591_3386 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003005681.1 3854455 D 561229 CDS YP_003005682.1 251790961 8119923 complement(3855842..3856390) 1 NC_012912.1 PFAM: sugar transferase; KEGG: vco:VC0395_A2640 putative capsule biosynthesis protein; sugar transferase 3856390 8119923 Dd1591_3387 Dickeya zeae Ech1591 sugar transferase YP_003005682.1 3855842 R 561229 CDS YP_003005683.1 251790962 8119924 complement(3856400..3857374) 1 NC_012912.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pol:Bpro_3986 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3857374 8119924 Dd1591_3388 Dickeya zeae Ech1591 NAD-dependent epimerase/dehydratase YP_003005683.1 3856400 R 561229 CDS YP_003005684.1 251790963 8119925 3857525..3859417 1 NC_012912.1 PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: vch:VC0260 mannosyl-transferase; polysaccharide biosynthesis protein CapD 3859417 8119925 Dd1591_3389 Dickeya zeae Ech1591 polysaccharide biosynthesis protein CapD YP_003005684.1 3857525 D 561229 CDS YP_003005685.1 251790964 8119926 3859432..3859716 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: spe:Spro_0361 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3859716 8119926 Dd1591_3390 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003005685.1 3859432 D 561229 CDS YP_003005686.1 251790965 8119927 3860135..3860512 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; KEGG: atc:AGR_C_1731 hypothetical protein; HxlR family transcriptional regulator 3860512 8119927 Dd1591_3391 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003005686.1 3860135 D 561229 CDS YP_003005687.1 251790966 8119928 complement(3860793..3861776) 1 NC_012912.1 PFAM: Integrase catalytic region; KEGG: ypg:YpAngola_A2063 transposase; Integrase catalytic region 3861776 8119928 Dd1591_3392 Dickeya zeae Ech1591 Integrase catalytic region YP_003005687.1 3860793 R 561229 CDS YP_003005688.1 251790967 8119929 complement(3861824..3862327) 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: ypg:YpAngola_A2064 hypothetical protein; transposase IS3/IS911 family protein 3862327 8119929 Dd1591_3393 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003005688.1 3861824 R 561229 CDS YP_003005689.1 251790968 8119931 3863948..3864964 1 NC_012912.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; KEGG: spe:Spro_1601 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 3864964 8119931 Dd1591_3395 Dickeya zeae Ech1591 UDP-glucose 4-epimerase YP_003005689.1 3863948 D 561229 CDS YP_003005690.1 251790969 8119932 3865595..3866728 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: ecr:ECIAI1_0543 putative transposase; transposase IS4 family protein 3866728 8119932 Dd1591_3396 Dickeya zeae Ech1591 transposase IS4 family protein YP_003005690.1 3865595 D 561229 CDS YP_003005691.1 251790970 8119933 3866810..3867955 1 NC_012912.1 PFAM: glycosyl transferase group 1; KEGG: spe:Spro_1603 glycosyl transferase group 1; glycosyl transferase group 1 3867955 8119933 Dd1591_3397 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003005691.1 3866810 D 561229 CDS YP_003005692.1 251790971 8119934 3868316..3868915 1 NC_012912.1 KEGG: ecl:EcolC_3406 integrase catalytic region; integrase catalytic region 3868915 8119934 Dd1591_3398 Dickeya zeae Ech1591 integrase catalytic region YP_003005692.1 3868316 D 561229 CDS YP_003005693.1 251790972 8119935 3869001..3870134 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: ecr:ECIAI1_0543 putative transposase; transposase IS4 family protein 3870134 8119935 Dd1591_3399 Dickeya zeae Ech1591 transposase IS4 family protein YP_003005693.1 3869001 D 561229 CDS YP_003005694.1 251790973 8119936 3870166..3871620 1 NC_012912.1 hypothetical protein 3871620 8119936 Dd1591_3400 Dickeya zeae Ech1591 hypothetical protein YP_003005694.1 3870166 D 561229 CDS YP_003005695.1 251790974 8119937 3871617..3872795 1 NC_012912.1 PFAM: polysaccharide biosynthesis protein; KEGG: plu:plu4800 WzxA protein; polysaccharide biosynthesis protein 3872795 8119937 Dd1591_3401 Dickeya zeae Ech1591 polysaccharide biosynthesis protein YP_003005695.1 3871617 D 561229 CDS YP_003005696.1 251790975 8119938 3872773..3873690 1 NC_012912.1 KEGG: aav:Aave_1206 hypothetical protein; hypothetical protein 3873690 8119938 Dd1591_3402 Dickeya zeae Ech1591 hypothetical protein YP_003005696.1 3872773 D 561229 CDS YP_003005697.1 251790976 8119939 3873690..3874820 1 NC_012912.1 PFAM: FAD dependent oxidoreductase; KEGG: pin:Ping_0450 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3874820 8119939 Dd1591_3403 Dickeya zeae Ech1591 FAD dependent oxidoreductase YP_003005697.1 3873690 D 561229 CDS YP_003005698.1 251790977 8119940 3874817..3875836 1 NC_012912.1 PFAM: glycosyl transferase family 2; KEGG: pin:Ping_0449 glycosyl transferase family protein; glycosyl transferase family 2 3875836 8119940 Dd1591_3404 Dickeya zeae Ech1591 glycosyl transferase family 2 YP_003005698.1 3874817 D 561229 CDS YP_003005699.1 251790978 8119941 3875836..3876624 1 NC_012912.1 KEGG: pin:Ping_0447 dolichyl-phosphate beta-D-mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase 3876624 8119941 Dd1591_3405 Dickeya zeae Ech1591 dolichyl-phosphate beta-D-mannosyltransferase YP_003005699.1 3875836 D 561229 CDS YP_003005700.1 251790979 8119942 3876709..3877476 1 NC_012912.1 KEGG: pin:Ping_0453 hypothetical protein; hypothetical protein 3877476 8119942 Dd1591_3406 Dickeya zeae Ech1591 hypothetical protein YP_003005700.1 3876709 D 561229 CDS YP_003005701.1 251790980 8119943 3877466..3878293 1 NC_012912.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pin:Ping_0452 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein 3878293 8119943 Dd1591_3407 Dickeya zeae Ech1591 xylose isomerase domain-containing protein YP_003005701.1 3877466 D 561229 CDS YP_003005702.1 251790981 8119944 3878287..3878652 1 NC_012912.1 KEGG: oan:Oant_2966 hypothetical protein; hypothetical protein 3878652 8119944 Dd1591_3408 Dickeya zeae Ech1591 hypothetical protein YP_003005702.1 3878287 D 561229 CDS YP_003005703.1 251790982 8119945 3878656..3879822 1 NC_012912.1 KEGG: pin:Ping_0448 hypothetical protein; hypothetical protein 3879822 8119945 Dd1591_3409 Dickeya zeae Ech1591 hypothetical protein YP_003005703.1 3878656 D 561229 CDS YP_003005704.1 251790983 8119946 3879815..3881974 1 NC_012912.1 hypothetical protein 3881974 8119946 Dd1591_3410 Dickeya zeae Ech1591 hypothetical protein YP_003005704.1 3879815 D 561229 CDS YP_003005705.1 251790984 8119947 3882353..3883639 1 NC_012912.1 KEGG: rsq:Rsph17025_4041 hypothetical protein; hypothetical protein 3883639 8119947 Dd1591_3411 Dickeya zeae Ech1591 hypothetical protein YP_003005705.1 3882353 D 561229 CDS YP_003005706.1 251790985 8119948 3883933..3884415 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: ypg:YpAngola_A2064 hypothetical protein; transposase IS3/IS911 family protein 3884415 8119948 Dd1591_3412 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003005706.1 3883933 D 561229 CDS YP_003005707.1 251790986 8119949 3884487..3885053 1 NC_012912.1 KEGG: yps:YPTB1892 putative transposase; putative transposase 3885053 8119949 Dd1591_3413 Dickeya zeae Ech1591 putative transposase YP_003005707.1 3884487 D 561229 CDS YP_003005708.1 251790987 8119950 complement(3885055..3886050) 1 NC_012912.1 PFAM: Integrase catalytic region; KEGG: ypg:YpAngola_A2063 transposase; Integrase catalytic region 3886050 8119950 Dd1591_3414 Dickeya zeae Ech1591 Integrase catalytic region YP_003005708.1 3885055 R 561229 CDS YP_003005709.1 251790988 8119951 complement(3886086..3886568) 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: ypg:YpAngola_A2064 hypothetical protein; transposase IS3/IS911 family protein 3886568 8119951 Dd1591_3415 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003005709.1 3886086 R 561229 CDS YP_003005710.1 251790989 8119954 complement(3887626..3888102) 1 NC_012912.1 KEGG: lhk:LHK_01280 transposase; hypothetical protein 3888102 8119954 Dd1591_3418 Dickeya zeae Ech1591 hypothetical protein YP_003005710.1 3887626 R 561229 CDS YP_003005711.1 251790990 8119956 3888576..3889544 1 NC_012912.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sgl:SG1481 transposase; transposase IS116/IS110/IS902 family protein 3889544 8119956 Dd1591_3420 Dickeya zeae Ech1591 transposase IS116/IS110/IS902 family protein YP_003005711.1 3888576 D 561229 CDS YP_003005712.1 251790991 8119958 complement(3889868..3890539) 1 NC_012912.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA0776 hypothetical protein; lysine exporter protein LysE/YggA 3890539 8119958 Dd1591_3421 Dickeya zeae Ech1591 lysine exporter protein LysE/YggA YP_003005712.1 3889868 R 561229 CDS YP_003005713.1 251790992 8119959 complement(3890805..3892322) 1 NC_012912.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 3892322 lysS 8119959 lysS Dickeya zeae Ech1591 lysyl-tRNA synthetase YP_003005713.1 3890805 R 561229 CDS YP_003005714.1 251790993 8119960 complement(join(3892331..3893353,3893355..3893429)) 1 NC_012912.1 KEGG: ypi:YpsIP31758_0882 peptide chain release factor 2; hypothetical protein 3893429 8119960 Dd1591_3423 Dickeya zeae Ech1591 hypothetical protein YP_003005714.1 3892331 R 561229 CDS YP_003005715.1 251790994 8119961 complement(3893600..3895330) 1 NC_012912.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: spe:Spro_3890 ssDNA exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3895330 8119961 Dd1591_3424 Dickeya zeae Ech1591 single-stranded-DNA-specific exonuclease RecJ YP_003005715.1 3893600 R 561229 CDS YP_003005716.1 251790995 8119962 complement(3895354..3896070) 1 NC_012912.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC 3896070 8119962 Dd1591_3425 Dickeya zeae Ech1591 thiol:disulfide interchange protein DsbC YP_003005716.1 3895354 R 561229 CDS YP_003005717.1 251790996 8119963 complement(3896159..3897058) 1 NC_012912.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: eca:ECA0770 site-specific tyrosine recombinase XerD; tyrosine recombinase XerD 3897058 8119963 Dd1591_3426 Dickeya zeae Ech1591 tyrosine recombinase XerD YP_003005717.1 3896159 R 561229 CDS YP_003005718.1 251790997 8119964 3897317..3898642 1 NC_012912.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA0769 transporter; metabolite/H+ symporter, major facilitator superfamily (MFS) 3898642 8119964 Dd1591_3427 Dickeya zeae Ech1591 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_003005718.1 3897317 D 561229 CDS YP_003005719.1 251790998 8119965 3898782..3899300 1 NC_012912.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 3899300 8119965 Dd1591_3428 Dickeya zeae Ech1591 flavodoxin FldB YP_003005719.1 3898782 D 561229 CDS YP_003005720.1 251790999 8119966 complement(3899407..3899838) 1 NC_012912.1 PFAM: protein of unknown function DUF1434; KEGG: eca:ECA0760 hypothetical protein; hypothetical protein 3899838 8119966 Dd1591_3429 Dickeya zeae Ech1591 hypothetical protein YP_003005720.1 3899407 R 561229 CDS YP_003005721.1 251791000 8119967 complement(3899819..3900091) 1 NC_012912.1 PFAM: protein of unknown function DUF339; KEGG: eca:ECA0759 hypothetical protein; hypothetical protein 3900091 8119967 Dd1591_3430 Dickeya zeae Ech1591 hypothetical protein YP_003005721.1 3899819 R 561229 CDS YP_003005722.1 251791001 8119968 3900396..3901376 1 NC_012912.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: eca:ECA0758 putative global regulator; folate-binding protein YgfZ 3901376 8119968 Dd1591_3431 Dickeya zeae Ech1591 folate-binding protein YgfZ YP_003005722.1 3900396 D 561229 CDS YP_003005723.1 251791002 8119969 complement(3901457..3902107) 1 NC_012912.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: kpe:KPK_0771 channel protein, hemolysin III family; channel protein, hemolysin III family 3902107 8119969 Dd1591_3432 Dickeya zeae Ech1591 channel protein, hemolysin III family YP_003005723.1 3901457 R 561229 CDS YP_003005724.1 251791003 8119970 3902317..3902925 1 NC_012912.1 KEGG: spe:Spro_3901 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3902925 8119970 Dd1591_3433 Dickeya zeae Ech1591 metal dependent phosphohydrolase YP_003005724.1 3902317 D 561229 CDS YP_003005725.1 251791004 8119971 complement(3903003..3903659) 1 NC_012912.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aha:AHA_3512 amino acid transporter LysE; lysine exporter protein LysE/YggA 3903659 8119971 Dd1591_3434 Dickeya zeae Ech1591 lysine exporter protein LysE/YggA YP_003005725.1 3903003 R 561229 CDS YP_003005726.1 251791005 8119972 complement(3903793..3906666) 1 NC_012912.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3906666 8119972 Dd1591_3435 Dickeya zeae Ech1591 glycine dehydrogenase YP_003005726.1 3903793 R 561229 CDS YP_003005727.1 251791006 8119973 complement(3906836..3907243) 1 NC_012912.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3907243 8119973 Dd1591_3436 Dickeya zeae Ech1591 glycine cleavage system protein H YP_003005727.1 3906836 R 561229 CDS YP_003005728.1 251791007 8119974 complement(3907275..3908375) 1 NC_012912.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3908375 gcvT 8119974 gcvT Dickeya zeae Ech1591 glycine cleavage system aminomethyltransferase T YP_003005728.1 3907275 R 561229 CDS YP_003005729.1 251791008 8119975 3909039..3910190 1 NC_012912.1 TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; KEGG: eca:ECA0742 L-1,2-propanediol oxidoreductase; L-1,2-propanediol oxidoreductase 3910190 8119975 Dd1591_3438 Dickeya zeae Ech1591 L-1,2-propanediol oxidoreductase YP_003005729.1 3909039 D 561229 CDS YP_003005730.1 251791009 8119976 complement(3910532..3912211) 1 NC_012912.1 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 3912211 8119976 Dd1591_3439 Dickeya zeae Ech1591 acetolactate synthase YP_003005730.1 3910532 R 561229 CDS YP_003005731.1 251791010 8119977 complement(3912267..3913055) 1 NC_012912.1 KEGG: yen:YE4016 alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 3913055 8119977 Dd1591_3440 Dickeya zeae Ech1591 alpha-acetolactate decarboxylase YP_003005731.1 3912267 R 561229 CDS YP_003005732.1 251791011 8119978 3913167..3914060 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0739 LysR family transcriptional regulator; LysR family transcriptional regulator 3914060 8119978 Dd1591_3441 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005732.1 3913167 D 561229 CDS YP_003005733.1 251791012 8119979 3914187..3914483 1 NC_012912.1 KEGG: spe:Spro_0646 hypothetical protein; hypothetical protein 3914483 8119979 Dd1591_3442 Dickeya zeae Ech1591 hypothetical protein YP_003005733.1 3914187 D 561229 CDS YP_003005734.1 251791013 8117909 complement(3915030..3915932) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0737 LysR family transcriptional regulator; LysR family transcriptional regulator 3915932 8117909 Dd1591_3443 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005734.1 3915030 R 561229 CDS YP_003005735.1 251791014 8117910 3916046..3917041 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: eca:ECA0736 putative aldo/keto reductase; aldo/keto reductase 3917041 8117910 Dd1591_3444 Dickeya zeae Ech1591 aldo/keto reductase YP_003005735.1 3916046 D 561229 CDS YP_003005736.1 251791015 8117911 complement(3917091..3918119) 1 NC_012912.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 3918119 rsmC 8117911 rsmC Dickeya zeae Ech1591 16S ribosomal RNA m2G1207 methyltransferase YP_003005736.1 3917091 R 561229 CDS YP_003005737.1 251791016 8117912 3918266..3918679 1 NC_012912.1 PFAM: DNA polymerase III psi subunit; KEGG: spe:Spro_0650 DNA polymerase III subunit psi; DNA polymerase III subunit psi 3918679 8117912 Dd1591_3446 Dickeya zeae Ech1591 DNA polymerase III subunit psi YP_003005737.1 3918266 D 561229 CDS YP_003005738.1 251791017 8117913 3918648..3919091 1 NC_012912.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 3919091 rimI 8117913 rimI Dickeya zeae Ech1591 ribosomal-protein-alanine N-acetyltransferase YP_003005738.1 3918648 D 561229 CDS YP_003005739.1 251791018 8117914 complement(3919100..3919402) 1 NC_012912.1 hypothetical protein 3919402 8117914 Dd1591_3448 Dickeya zeae Ech1591 hypothetical protein YP_003005739.1 3919100 R 561229 CDS YP_003005740.1 251791019 8117915 complement(3919568..3920293) 1 NC_012912.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: eta:ETA_06690 purine nucleoside phosphorylase DeoD-type; purine nucleoside phosphorylase 3920293 8117915 Dd1591_3449 Dickeya zeae Ech1591 purine nucleoside phosphorylase YP_003005740.1 3919568 R 561229 CDS YP_003005741.1 251791020 8117916 complement(3920388..3921611) 1 NC_012912.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 3921611 8117916 Dd1591_3450 Dickeya zeae Ech1591 phosphopentomutase YP_003005741.1 3920388 R 561229 CDS YP_003005742.1 251791021 8117917 complement(3921694..3923025) 1 NC_012912.1 KEGG: eca:ECA0728 thymidine phosphorylase; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; thymidine phosphorylase 3923025 8117917 Dd1591_3451 Dickeya zeae Ech1591 thymidine phosphorylase YP_003005742.1 3921694 R 561229 CDS YP_003005743.1 251791022 8117918 complement(3923088..3923867) 1 NC_012912.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3923867 8117918 Dd1591_3452 Dickeya zeae Ech1591 deoxyribose-phosphate aldolase YP_003005743.1 3923088 R 561229 CDS YP_003005744.1 251791023 8117919 3924357..3924659 1 NC_012912.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: yen:YE0453 GIY-YIG nuclease superfamily protein; excinuclease ABC subunit C 3924659 8117919 Dd1591_3453 Dickeya zeae Ech1591 excinuclease ABC subunit C YP_003005744.1 3924357 D 561229 CDS YP_003005745.1 251791024 8117920 complement(3924646..3925149) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0724 putative acetyltransferase; GCN5-related N-acetyltransferase 3925149 8117920 Dd1591_3454 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005745.1 3924646 R 561229 CDS YP_003005746.1 251791025 8117921 complement(3925143..3925667) 1 NC_012912.1 PFAM: Sterol-binding domain protein; KEGG: eca:ECA0723 putative sterol transferase; Sterol-binding domain-containing protein 3925667 8117921 Dd1591_3455 Dickeya zeae Ech1591 Sterol-binding domain-containing protein YP_003005746.1 3925143 R 561229 CDS YP_003005747.1 251791026 8117922 3925988..3926986 1 NC_012912.1 PFAM: peptidase U32; KEGG: eca:ECA0722 putative protease; peptidase U32 3926986 8117922 Dd1591_3456 Dickeya zeae Ech1591 peptidase U32 YP_003005747.1 3925988 D 561229 CDS YP_003005748.1 251791027 8117923 3927005..3927883 1 NC_012912.1 PFAM: peptidase U32; KEGG: yen:YE0449 hypothetical protein; peptidase U32 3927883 8117923 Dd1591_3457 Dickeya zeae Ech1591 peptidase U32 YP_003005748.1 3927005 D 561229 CDS YP_003005749.1 251791028 8117924 3927998..3929017 1 NC_012912.1 PFAM: Luciferase-like monooxygenase; KEGG: yen:YE0442 hypothetical protein; hypothetical protein 3929017 8117924 Dd1591_3458 Dickeya zeae Ech1591 hypothetical protein YP_003005749.1 3927998 D 561229 CDS YP_003005750.1 251791029 8117925 complement(3929089..3930963) 1 NC_012912.1 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 3930963 8117925 Dd1591_3459 Dickeya zeae Ech1591 ATP-dependent RNA helicase DeaD YP_003005750.1 3929089 R 561229 CDS YP_003005751.1 251791030 8117926 complement(3931144..3932028) 1 NC_012912.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 3932028 8117926 Dd1591_3460 Dickeya zeae Ech1591 lipoprotein NlpI YP_003005751.1 3931144 R 561229 CDS YP_003005752.1 251791031 8117927 complement(3932156..3934276) 1 NC_012912.1 KEGG: eca:ECA0716 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase 3934276 8117927 Dd1591_3461 Dickeya zeae Ech1591 polynucleotide phosphorylase/polyadenylase YP_003005752.1 3932156 R 561229 CDS YP_003005753.1 251791032 8117928 complement(3934536..3934805) 1 NC_012912.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 3934805 rpsO 8117928 rpsO Dickeya zeae Ech1591 30S ribosomal protein S15 YP_003005753.1 3934536 R 561229 CDS YP_003005754.1 251791033 8117929 complement(3934913..3935869) 1 NC_012912.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: eca:ECA0714 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 3935869 8117929 Dd1591_3463 Dickeya zeae Ech1591 tRNA pseudouridine synthase B YP_003005754.1 3934913 R 561229 CDS YP_003005755.1 251791034 8117930 complement(3935869..3936270) 1 NC_012912.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3936270 rbfA 8117930 rbfA Dickeya zeae Ech1591 ribosome-binding factor A YP_003005755.1 3935869 R 561229 CDS YP_003005756.1 251791035 8117931 complement(3936345..3939062) 1 NC_012912.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3939062 infB 8117931 infB Dickeya zeae Ech1591 translation initiation factor IF-2 YP_003005756.1 3936345 R 561229 CDS YP_003005757.1 251791036 8117932 complement(3939088..3940578) 1 NC_012912.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 3940578 nusA 8117932 nusA Dickeya zeae Ech1591 transcription elongation factor NusA YP_003005757.1 3939088 R 561229 CDS YP_003005758.1 251791037 8117933 complement(3940600..3941064) 1 NC_012912.1 PFAM: protein of unknown function DUF150; KEGG: ecm:EcSMS35_3466 hypothetical protein; hypothetical protein 3941064 8117933 Dd1591_3467 Dickeya zeae Ech1591 hypothetical protein YP_003005758.1 3940600 R 561229 CDS YP_003005759.1 251791038 8117936 complement(3941547..3941882) 1 NC_012912.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: spe:Spro_0486 preprotein translocase subunit SecG; preprotein translocase subunit SecG 3941882 8117936 Dd1591_3468 Dickeya zeae Ech1591 preprotein translocase subunit SecG YP_003005759.1 3941547 R 561229 CDS YP_003005760.1 251791039 8117937 complement(3942176..3943513) 1 NC_012912.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3943513 glmM 8117937 glmM Dickeya zeae Ech1591 phosphoglucosamine mutase YP_003005760.1 3942176 R 561229 CDS YP_003005761.1 251791040 8117938 complement(3943522..3944355) 1 NC_012912.1 KEGG: eca:ECA0699 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 3944355 8117938 Dd1591_3470 Dickeya zeae Ech1591 dihydropteroate synthase YP_003005761.1 3943522 R 561229 CDS YP_003005762.1 251791041 8117939 complement(3944469..3946421) 1 NC_012912.1 KEGG: kpe:KPK_0533 ATP-dependent metallopeptidase HflB; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 3946421 8117939 Dd1591_3471 Dickeya zeae Ech1591 ATP-dependent metalloprotease FtsH YP_003005762.1 3944469 R 561229 CDS YP_003005763.1 251791042 8117940 complement(3946469..3947098) 1 NC_012912.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 3947098 rrmJ 8117940 rrmJ Dickeya zeae Ech1591 23S rRNA methyltransferase J YP_003005763.1 3946469 R 561229 CDS YP_003005764.1 251791043 8117941 3947258..3947551 1 NC_012912.1 PFAM: protein of unknown function UPF0044; KEGG: eca:ECA0696 hypothetical protein; hypothetical protein 3947551 8117941 Dd1591_3473 Dickeya zeae Ech1591 hypothetical protein YP_003005764.1 3947258 D 561229 CDS YP_003005765.1 251791044 8117942 complement(3947665..3948141) 1 NC_012912.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ses:SARI_04326 transcription elongation factor GreA; transcription elongation factor GreA 3948141 8117942 Dd1591_3474 Dickeya zeae Ech1591 transcription elongation factor GreA YP_003005765.1 3947665 R 561229 CDS YP_003005766.1 251791045 8117943 3948407..3949840 1 NC_012912.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase/endopeptidase 3949840 8117943 Dd1591_3475 Dickeya zeae Ech1591 D-alanyl-D-alanine carboxypeptidase/endopeptidase YP_003005766.1 3948407 D 561229 CDS YP_003005767.1 251791046 8117944 complement(3949942..3951117) 1 NC_012912.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3951117 obgE 8117944 obgE Dickeya zeae Ech1591 GTPase ObgE YP_003005767.1 3949942 R 561229 CDS YP_003005768.1 251791047 8117945 complement(3951377..3952321) 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: eca:ECA0692 hypothetical protein; hypothetical protein 3952321 8117945 Dd1591_3477 Dickeya zeae Ech1591 hypothetical protein YP_003005768.1 3951377 R 561229 CDS YP_003005769.1 251791048 8117946 complement(3952423..3952680) 1 NC_012912.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: esa:ESA_03578 50S ribosomal protein L27; 50S ribosomal protein L27 3952680 8117946 Dd1591_3478 Dickeya zeae Ech1591 50S ribosomal protein L27 YP_003005769.1 3952423 R 561229 CDS YP_003005770.1 251791049 8117947 complement(3952700..3953011) 1 NC_012912.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: eca:ECA0690 50S ribosomal protein L21; 50S ribosomal protein L21 3953011 rplU 8117947 rplU Dickeya zeae Ech1591 50S ribosomal protein L21 YP_003005770.1 3952700 R 561229 CDS YP_003005771.1 251791050 8117949 3953271..3954242 1 NC_012912.1 PFAM: Polyprenyl synthetase; KEGG: eca:ECA0689 octaprenyl diphosphate synthase; octaprenyl diphosphate synthase 3954242 8117949 Dd1591_3481 Dickeya zeae Ech1591 octaprenyl diphosphate synthase YP_003005771.1 3953271 D 561229 CDS YP_003005772.1 251791051 8117950 complement(3954244..3954654) 1 NC_012912.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: eca:ECA0688 hypothetical protein; MuA-transposase/repressor protein CI DNA-binding 3954654 8117950 Dd1591_3482 Dickeya zeae Ech1591 MuA-transposase/repressor protein CI DNA-binding YP_003005772.1 3954244 R 561229 CDS YP_003005773.1 251791052 8117951 complement(3954859..3955245) 1 NC_012912.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: eca:ECA0687 putative DNA-binding protein; MuA-transposase/repressor protein CI DNA-binding 3955245 8117951 Dd1591_3483 Dickeya zeae Ech1591 MuA-transposase/repressor protein CI DNA-binding YP_003005773.1 3954859 R 561229 CDS YP_003005774.1 251791053 8117952 complement(3955784..3956725) 1 NC_012912.1 oxidizes malate to oxaloacetate; malate dehydrogenase 3956725 8117952 Dd1591_3484 Dickeya zeae Ech1591 malate dehydrogenase YP_003005774.1 3955784 R 561229 CDS YP_003005775.1 251791054 8117953 3957197..3957667 1 NC_012912.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 3957667 8117953 Dd1591_3485 Dickeya zeae Ech1591 arginine repressor YP_003005775.1 3957197 D 561229 CDS YP_003005776.1 251791055 8117954 complement(3957720..3958733) 1 NC_012912.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 3958733 8117954 Dd1591_3486 Dickeya zeae Ech1591 putative DNA-binding/iron metalloprotein/AP endonuclease YP_003005776.1 3957720 R 561229 CDS YP_003005777.1 251791056 8117955 3958965..3959180 1 NC_012912.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3959180 rpsU 8117955 rpsU Dickeya zeae Ech1591 30S ribosomal protein S21 YP_003005777.1 3958965 D 561229 CDS YP_003005778.1 251791057 8117956 3959307..3961061 1 NC_012912.1 synthesizes RNA primers at the replication forks; DNA primase 3961061 dnaG 8117956 dnaG Dickeya zeae Ech1591 DNA primase YP_003005778.1 3959307 D 561229 CDS YP_003005779.1 251791058 8117957 3961218..3963053 1 NC_012912.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3963053 8117957 Dd1591_3489 Dickeya zeae Ech1591 RNA polymerase sigma factor RpoD YP_003005779.1 3961218 D 561229 CDS YP_003005780.1 251791059 8117959 complement(3963742..3964605) 1 NC_012912.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfl:PFL_2803 oxidoreductase, zinc-binding; alcohol dehydrogenase zinc-binding domain-containing protein 3964605 8117959 Dd1591_3490 Dickeya zeae Ech1591 alcohol dehydrogenase zinc-binding domain-containing protein YP_003005780.1 3963742 R 561229 CDS YP_003005781.1 251791060 8117960 complement(3964861..3965724) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfl:PFL_2805 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 3965724 8117960 Dd1591_3491 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005781.1 3964861 R 561229 CDS YP_003005782.1 251791061 8117961 3965841..3966890 1 NC_012912.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3293 putative oxidoreductase; aldo/keto reductase 3966890 8117961 Dd1591_3492 Dickeya zeae Ech1591 aldo/keto reductase YP_003005782.1 3965841 D 561229 CDS YP_003005783.1 251791062 8117962 3966984..3967565 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: eca:ECA3294 TetR family transcriptional regulator; TetR family transcriptional regulator 3967565 8117962 Dd1591_3493 Dickeya zeae Ech1591 TetR family transcriptional regulator YP_003005783.1 3966984 D 561229 CDS YP_003005784.1 251791063 8117963 complement(3967578..3968549) 1 NC_012912.1 PFAM: ApbE family lipoprotein; KEGG: eca:ECA1970 putative thiamine biosynthesis protein; ApbE family lipoprotein 3968549 8117963 Dd1591_3494 Dickeya zeae Ech1591 ApbE family lipoprotein YP_003005784.1 3967578 R 561229 CDS YP_003005785.1 251791064 8117964 complement(3968677..3971454) 1 NC_012912.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; NADH:flavin oxidoreductase/NADH oxidase; KEGG: ent:Ent638_2558 flavocytochrome c; flavocytochrome c 3971454 8117964 Dd1591_3495 Dickeya zeae Ech1591 flavocytochrome c YP_003005785.1 3968677 R 561229 CDS YP_003005786.1 251791065 8117965 complement(3971990..3973417) 1 NC_012912.1 PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000919 coniferyl-aldehyde dehydrogenase protein; aldehyde dehydrogenase 3973417 8117965 Dd1591_3496 Dickeya zeae Ech1591 aldehyde dehydrogenase YP_003005786.1 3971990 R 561229 CDS YP_003005787.1 251791066 8117966 complement(3973584..3974633) 1 NC_012912.1 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 3974633 8117966 Dd1591_3497 Dickeya zeae Ech1591 thiamine biosynthesis lipoprotein ApbE YP_003005787.1 3973584 R 561229 CDS YP_003005788.1 251791067 8117967 complement(3974915..3976186) 1 NC_012912.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bvi:Bcep1808_7013 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 3976186 8117967 Dd1591_3498 Dickeya zeae Ech1591 RNA-directed DNA polymerase YP_003005788.1 3974915 R 561229 CDS YP_003005789.1 251791068 8117968 3976250..3976798 1 NC_012912.1 hypothetical protein 3976798 8117968 Dd1591_3499 Dickeya zeae Ech1591 hypothetical protein YP_003005789.1 3976250 D 561229 CDS YP_003005790.1 251791069 8117969 complement(3977107..3977583) 1 NC_012912.1 PFAM: protein of unknown function Spy-related; KEGG: kpe:KPK_3216 spheroplast protein Y; hypothetical protein 3977583 8117969 Dd1591_3500 Dickeya zeae Ech1591 hypothetical protein YP_003005790.1 3977107 R 561229 CDS YP_003005791.1 251791070 8117970 complement(3977831..3979222) 1 NC_012912.1 cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter 3979222 uhpT 8117970 uhpT Dickeya zeae Ech1591 sugar phosphate antiporter YP_003005791.1 3977831 R 561229 CDS YP_003005792.1 251791071 8117971 complement(3979374..3980717) 1 NC_012912.1 membrane protein regulates uhpT expression; regulatory protein UhpC 3980717 8117971 Dd1591_3502 Dickeya zeae Ech1591 regulatory protein UhpC YP_003005792.1 3979374 R 561229 CDS YP_003005793.1 251791072 8117972 complement(3980717..3982234) 1 NC_012912.1 Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; sensory histidine kinase UhpB 3982234 8117972 Dd1591_3503 Dickeya zeae Ech1591 sensory histidine kinase UhpB YP_003005793.1 3980717 R 561229 CDS YP_003005794.1 251791073 8117973 complement(3982234..3982824) 1 NC_012912.1 response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter; DNA-binding transcriptional activator UhpA 3982824 8117973 Dd1591_3504 Dickeya zeae Ech1591 DNA-binding transcriptional activator UhpA YP_003005794.1 3982234 R 561229 CDS YP_003005795.1 251791074 8117974 complement(3983067..3983363) 1 NC_012912.1 KEGG: eca:ECA0656 hypothetical protein; hypothetical protein 3983363 8117974 Dd1591_3505 Dickeya zeae Ech1591 hypothetical protein YP_003005795.1 3983067 R 561229 CDS YP_003005796.1 251791075 8117975 complement(3983475..3984632) 1 NC_012912.1 PFAM: methyltransferase small; KEGG: eca:ECA0654 hypothetical protein; rRNA (guanine-N(2)-)-methyltransferase 3984632 8117975 Dd1591_3506 Dickeya zeae Ech1591 rRNA (guanine-N(2)-)-methyltransferase YP_003005796.1 3983475 R 561229 CDS YP_003005797.1 251791076 8117976 3985076..3986029 1 NC_012912.1 PFAM: Integral membrane protein TerC; KEGG: eca:ECA0652 hypothetical protein; Integral membrane protein TerC 3986029 8117976 Dd1591_3507 Dickeya zeae Ech1591 Integral membrane protein TerC YP_003005797.1 3985076 D 561229 CDS YP_003005798.1 251791077 8117977 complement(3986068..3986616) 1 NC_012912.1 KEGG: eca:ECA0648 hypothetical protein; hypothetical protein 3986616 8117977 Dd1591_3508 Dickeya zeae Ech1591 hypothetical protein YP_003005798.1 3986068 R 561229 CDS YP_003005799.1 251791078 8117978 complement(3986730..3988220) 1 NC_012912.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: eca:ECA0647 altronate hydrolase; altronate dehydratase 3988220 8117978 Dd1591_3509 Dickeya zeae Ech1591 altronate dehydratase YP_003005799.1 3986730 R 561229 CDS YP_003005800.1 251791079 8117979 complement(3988239..3989690) 1 NC_012912.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 3989690 8117979 Dd1591_3510 Dickeya zeae Ech1591 altronate oxidoreductase YP_003005800.1 3988239 R 561229 CDS YP_003005801.1 251791080 8117980 complement(3990081..3991490) 1 NC_012912.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3991490 8117980 Dd1591_3511 Dickeya zeae Ech1591 glucuronate isomerase YP_003005801.1 3990081 R 561229 CDS YP_003005802.1 251791081 8117981 3992004..3993305 1 NC_012912.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0644 galacturonate transporter; d-galactonate transporter 3993305 8117981 Dd1591_3512 Dickeya zeae Ech1591 d-galactonate transporter YP_003005802.1 3992004 D 561229 CDS YP_003005803.1 251791082 8117982 3993666..3994445 1 NC_012912.1 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR 3994445 8117982 Dd1591_3513 Dickeya zeae Ech1591 DNA-binding transcriptional repressor ExuR YP_003005803.1 3993666 D 561229 CDS YP_003005804.1 251791083 8117983 3995081..3995755 1 NC_012912.1 PFAM: SNARE associated Golgi protein; KEGG: eca:ECA0642 DedA family membrane protein; hypothetical protein 3995755 8117983 Dd1591_3514 Dickeya zeae Ech1591 hypothetical protein YP_003005804.1 3995081 D 561229 CDS YP_003005805.1 251791084 8117984 3995759..3996100 1 NC_012912.1 KEGG: eca:ECA0641 hypothetical protein; hypothetical protein 3996100 8117984 Dd1591_3515 Dickeya zeae Ech1591 hypothetical protein YP_003005805.1 3995759 D 561229 CDS YP_003005806.1 251791085 8117985 3996336..3996641 1 NC_012912.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: eca:ECA0639 hypothetical protein; hypothetical protein 3996641 8117985 Dd1591_3516 Dickeya zeae Ech1591 hypothetical protein YP_003005806.1 3996336 D 561229 CDS YP_003005807.1 251791086 8117986 3996645..3997043 1 NC_012912.1 KEGG: ypi:YpsIP31758_0482 hypothetical protein; hypothetical protein 3997043 8117986 Dd1591_3517 Dickeya zeae Ech1591 hypothetical protein YP_003005807.1 3996645 D 561229 CDS YP_003005808.1 251791087 8119981 3997040..3997342 1 NC_012912.1 KEGG: yen:YE3717 hypothetical protein; hypothetical protein 3997342 8119981 Dd1591_3518 Dickeya zeae Ech1591 hypothetical protein YP_003005808.1 3997040 D 561229 CDS YP_003005809.1 251791088 8119982 3997658..3998053 1 NC_012912.1 PFAM: DoxX family protein; KEGG: eca:ECA0636 hypothetical protein; DoxX family protein 3998053 8119982 Dd1591_3519 Dickeya zeae Ech1591 DoxX family protein YP_003005809.1 3997658 D 561229 CDS YP_003005810.1 251791089 8119983 3998156..3999142 1 NC_012912.1 PFAM: Glutathione S-transferase domain; KEGG: eca:ECA0635 hypothetical protein; Glutathione transferase 3999142 8119983 Dd1591_3520 Dickeya zeae Ech1591 Glutathione transferase YP_003005810.1 3998156 D 561229 CDS YP_003005811.1 251791090 8119984 complement(3999240..4000136) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0634 LysR family transcriptional regulator; LysR family transcriptional regulator 4000136 8119984 Dd1591_3521 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005811.1 3999240 R 561229 CDS YP_003005812.1 251791091 8119985 4000246..4000953 1 NC_012912.1 PFAM: Pirin domain protein; KEGG: eca:ECA0633 hypothetical protein; Pirin domain-containing protein 4000953 8119985 Dd1591_3522 Dickeya zeae Ech1591 Pirin domain-containing protein YP_003005812.1 4000246 D 561229 CDS YP_003005813.1 251791092 8119986 4001114..4001623 1 NC_012912.1 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor 4001623 8119986 Dd1591_3523 Dickeya zeae Ech1591 zinc uptake transcriptional repressor YP_003005813.1 4001114 D 561229 CDS YP_003005814.1 251791093 8119987 complement(4001874..4002485) 1 NC_012912.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 4002485 8119987 Dd1591_3524 Dickeya zeae Ech1591 LexA repressor YP_003005814.1 4001874 R 561229 CDS YP_003005815.1 251791094 8119988 complement(4002595..4002960) 1 NC_012912.1 PFAM: diacylglycerol kinase; KEGG: eca:ECA0629 diacylglycerol kinase; diacylglycerol kinase 4002960 8119988 Dd1591_3525 Dickeya zeae Ech1591 diacylglycerol kinase YP_003005815.1 4002595 R 561229 CDS YP_003005816.1 251791095 8119989 4003090..4005567 1 NC_012912.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 4005567 8119989 Dd1591_3526 Dickeya zeae Ech1591 glycerol-3-phosphate acyltransferase YP_003005816.1 4003090 D 561229 CDS YP_003005817.1 251791096 8119990 complement(4005611..4006495) 1 NC_012912.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 4006495 ubiA 8119990 ubiA Dickeya zeae Ech1591 4-hydroxybenzoate octaprenyltransferase YP_003005817.1 4005611 R 561229 CDS YP_003005818.1 251791097 8119991 complement(4006496..4007011) 1 NC_012912.1 PFAM: Chorismate lyase; KEGG: eca:ECA0626 chorismate pyruvate lyase; Chorismate lyase 4007011 8119991 Dd1591_3528 Dickeya zeae Ech1591 Chorismate lyase YP_003005818.1 4006496 R 561229 CDS YP_003005819.1 251791098 8119992 complement(4007363..4009009) 1 NC_012912.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: kpe:KPK_5137 chaperonin GroL; chaperonin GroEL 4009009 8119992 Dd1591_3529 Dickeya zeae Ech1591 chaperonin GroEL YP_003005819.1 4007363 R 561229 CDS YP_003005820.1 251791099 8119993 complement(4009055..4009348) 1 NC_012912.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 4009348 groES 8119993 groES Dickeya zeae Ech1591 co-chaperonin GroES YP_003005820.1 4009055 R 561229 CDS YP_003005821.1 251791100 8119994 complement(4009542..4010042) 1 NC_012912.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: spe:Spro_0407 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 4010042 8119994 Dd1591_3531 Dickeya zeae Ech1591 FxsA cytoplasmic membrane protein YP_003005821.1 4009542 R 561229 CDS YP_003005822.1 251791101 8119995 4010486..4011925 1 NC_012912.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 4011925 aspA 8119995 aspA Dickeya zeae Ech1591 aspartate ammonia-lyase YP_003005822.1 4010486 D 561229 CDS YP_003005823.1 251791102 8119996 4012112..4013413 1 NC_012912.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 4013413 8119996 Dd1591_3533 Dickeya zeae Ech1591 anaerobic C4-dicarboxylate transporter YP_003005823.1 4012112 D 561229 CDS YP_003005824.1 251791103 8119997 4013528..4013908 1 NC_012912.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA 4013908 8119997 Dd1591_3534 Dickeya zeae Ech1591 divalent-cation tolerance protein CutA YP_003005824.1 4013528 D 561229 CDS YP_003005825.1 251791104 8119998 4013884..4015602 1 NC_012912.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein precursor 4015602 dipZ 8119998 dipZ Dickeya zeae Ech1591 thiol:disulfide interchange protein precursor YP_003005825.1 4013884 D 561229 CDS YP_003005826.1 251791105 8119999 4015690..4016265 1 NC_012912.1 PFAM: regulatory protein TetR; KEGG: yps:YPTB0395 putative transcriptional regulator; putative transcriptional regulator 4016265 8119999 Dd1591_3536 Dickeya zeae Ech1591 putative transcriptional regulator YP_003005826.1 4015690 D 561229 CDS YP_003005827.1 251791106 8120001 4016665..4017924 1 NC_012912.1 PFAM: integrase family protein; KEGG: stt:t4371 bacteriophage integrase; integrase family protein 4017924 8120001 Dd1591_3537 Dickeya zeae Ech1591 integrase family protein YP_003005827.1 4016665 D 561229 CDS YP_003005828.1 251791107 8120002 complement(4018065..4018235) 1 NC_012912.1 KEGG: ecq:ECED1_1795 conserved hypothetical protein; possible repressor (interpro); hypothetical protein 4018235 8120002 Dd1591_3538 Dickeya zeae Ech1591 hypothetical protein YP_003005828.1 4018065 R 561229 CDS YP_003005829.1 251791108 8120003 4018376..4018717 1 NC_012912.1 KEGG: yen:YE3495A hypothetical protein; hypothetical protein 4018717 8120003 Dd1591_3539 Dickeya zeae Ech1591 hypothetical protein YP_003005829.1 4018376 D 561229 CDS YP_003005830.1 251791109 8120006 4019629..4020372 1 NC_012912.1 KEGG: eum:ECUMN_2300 putative MobC mobilization protein; putative MobC mobilization protein 4020372 8120006 Dd1591_3542 Dickeya zeae Ech1591 putative MobC mobilization protein YP_003005830.1 4019629 D 561229 CDS YP_003005831.1 251791110 8120007 4020431..4020649 1 NC_012912.1 PFAM: Post-segregation antitoxin CcdA; KEGG: eca:ECA0511 plasmid maintenance protein CcdA; plasmid maintenance protein CcdA 4020649 8120007 Dd1591_3543 Dickeya zeae Ech1591 plasmid maintenance protein CcdA YP_003005831.1 4020431 D 561229 CDS YP_003005832.1 251791111 8120008 4020652..4020957 1 NC_012912.1 controlled cell death protein; post-segregation toxin; toxin addiction system; plasmid maintenance protein CcdB 4020957 8120008 Dd1591_3544 Dickeya zeae Ech1591 plasmid maintenance protein CcdB YP_003005832.1 4020652 D 561229 CDS YP_003005833.1 251791112 8120009 complement(4021156..4021998) 1 NC_012912.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: abc:ACICU_00863 site-specific DNA methylase; D12 class N6 adenine-specific DNA methyltransferase 4021998 8120009 Dd1591_3545 Dickeya zeae Ech1591 D12 class N6 adenine-specific DNA methyltransferase YP_003005833.1 4021156 R 561229 CDS YP_003005834.1 251791113 8120010 complement(4022084..4023805) 1 NC_012912.1 SMART: AAA ATPase; KEGG: psa:PST_3231 hypothetical protein; AAA ATPase 4023805 8120010 Dd1591_3546 Dickeya zeae Ech1591 AAA ATPase YP_003005834.1 4022084 R 561229 CDS YP_003005835.1 251791114 8120011 complement(4024096..4024590) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stt:t4359 hypothetical protein; GCN5-related N-acetyltransferase 4024590 8120011 Dd1591_3547 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005835.1 4024096 R 561229 CDS YP_003005836.1 251791115 8120012 complement(4024587..4024880) 1 NC_012912.1 PFAM: Protein of unknown function DUF1778; KEGG: eca:ECA0958 hypothetical protein; hypothetical protein 4024880 8120012 Dd1591_3548 Dickeya zeae Ech1591 hypothetical protein YP_003005836.1 4024587 R 561229 CDS YP_003005837.1 251791116 8120013 complement(4025405..4025905) 1 NC_012912.1 KEGG: eca:ECA0510 putative capsular polysacharide biosynthesis transferase; putative capsular polysacharide biosynthesis transferase 4025905 8120013 Dd1591_3549 Dickeya zeae Ech1591 putative capsular polysacharide biosynthesis transferase YP_003005837.1 4025405 R 561229 CDS YP_003005838.1 251791117 8120014 complement(4025932..4027326) 1 NC_012912.1 KEGG: eca:ECA0509 hypothetical protein; hypothetical protein 4027326 8120014 Dd1591_3550 Dickeya zeae Ech1591 hypothetical protein YP_003005838.1 4025932 R 561229 CDS YP_003005839.1 251791118 8120015 complement(4027365..4027772) 1 NC_012912.1 KEGG: eca:ECA0508 hypothetical protein; hypothetical protein 4027772 8120015 Dd1591_3551 Dickeya zeae Ech1591 hypothetical protein YP_003005839.1 4027365 R 561229 CDS YP_003005840.1 251791119 8120016 complement(4027791..4028903) 1 NC_012912.1 PFAM: glycosyl transferase group 1; Protein of unknown function DUF1972; KEGG: eca:ECA0507 putative capsular polysaccharide bisynthesis glycosyl transferase; glycosyl transferase group 1 4028903 8120016 Dd1591_3552 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003005840.1 4027791 R 561229 CDS YP_003005841.1 251791120 8120017 complement(4028905..4030116) 1 NC_012912.1 PFAM: glycosyl transferase group 1; KEGG: eca:ECA0506 capsular polysaccharide bisynthesis glycosyl transferase; glycosyl transferase group 1 4030116 8120017 Dd1591_3553 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003005841.1 4028905 R 561229 CDS YP_003005842.1 251791121 8120018 complement(4030126..4031115) 1 NC_012912.1 PFAM: glycosyl transferase family 2; KEGG: eca:ECA0505 capsular polysaccharide bisynthesis glycosyl transferase; glycosyl transferase family 2 4031115 8120018 Dd1591_3554 Dickeya zeae Ech1591 glycosyl transferase family 2 YP_003005842.1 4030126 R 561229 CDS YP_003005843.1 251791122 8120019 complement(4031108..4032490) 1 NC_012912.1 KEGG: eca:ECA0504 putative capsular polysaccharide bisynthesis protein; putative capsular polysaccharide biosynthesis protein 4032490 8120019 Dd1591_3555 Dickeya zeae Ech1591 putative capsular polysaccharide biosynthesis protein YP_003005843.1 4031108 R 561229 CDS YP_003005844.1 251791123 8120020 complement(4032487..4033698) 1 NC_012912.1 KEGG: eca:ECA0503 putative capsular polysaccharide bisynthesis protein; putative capsular polysaccharide biosynthesis protein 4033698 8120020 Dd1591_3556 Dickeya zeae Ech1591 putative capsular polysaccharide biosynthesis protein YP_003005844.1 4032487 R 561229 CDS YP_003005845.1 251791124 8120021 complement(4033695..4035827) 1 NC_012912.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: eca:ECA0502 putative capsulatr polysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 4035827 8120021 Dd1591_3557 Dickeya zeae Ech1591 lipopolysaccharide biosynthesis protein YP_003005845.1 4033695 R 561229 CDS YP_003005846.1 251791125 8120022 complement(4035830..4036387) 1 NC_012912.1 PFAM: polysaccharide export protein; KEGG: eca:ECA0501 putative capsular polysaccharide export protein; polysaccharide export protein 4036387 8120022 Dd1591_3558 Dickeya zeae Ech1591 polysaccharide export protein YP_003005846.1 4035830 R 561229 CDS YP_003005847.1 251791126 8120023 complement(4036389..4037675) 1 NC_012912.1 KEGG: eca:ECA0500 putative capsular polysaccharide biosynthesis protein; putative capsular polysaccharide biosynthesis protein 4037675 8120023 Dd1591_3559 Dickeya zeae Ech1591 putative capsular polysaccharide biosynthesis protein YP_003005847.1 4036389 R 561229 CDS YP_003005848.1 251791127 8120024 complement(4037665..4039071) 1 NC_012912.1 KEGG: eca:ECA0499 putative capsular polysaccharide biosynthesis protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; UDP-phosphate glucose phosphotransferase 4039071 8120024 Dd1591_3560 Dickeya zeae Ech1591 UDP-phosphate glucose phosphotransferase YP_003005848.1 4037665 R 561229 CDS YP_003005849.1 251791128 8120025 complement(4039548..4040738) 1 NC_012912.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: efe:EFER_1473 putative mandelate racemase; mandelate racemase/muconate lactonizing protein 4040738 8120025 Dd1591_3561 Dickeya zeae Ech1591 mandelate racemase/muconate lactonizing protein YP_003005849.1 4039548 R 561229 CDS YP_003005850.1 251791129 8120026 4041015..4042037 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ses:SARI_03945 hypothetical protein; LacI family transcriptional regulator 4042037 8120026 Dd1591_3562 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003005850.1 4041015 D 561229 CDS YP_003005851.1 251791130 8120027 complement(4042054..4042485) 1 NC_012912.1 KEGG: bmn:BMA10247_3037 MerR family transcriptional regulator; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 4042485 8120027 Dd1591_3563 Dickeya zeae Ech1591 MerR family transcriptional regulator YP_003005851.1 4042054 R 561229 CDS YP_003005852.1 251791131 8120028 4042555..4044912 1 NC_012912.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A4439 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 4044912 8120028 Dd1591_3564 Dickeya zeae Ech1591 heavy metal translocating P-type ATPase YP_003005852.1 4042555 D 561229 CDS YP_003005853.1 251791132 8120029 complement(4045006..4046160) 1 NC_012912.1 PFAM: monooxygenase FAD-binding; KEGG: kpn:KPN_01663 putative flavoprotein monooxygenase; monooxygenase FAD-binding 4046160 8120029 Dd1591_3565 Dickeya zeae Ech1591 monooxygenase FAD-binding YP_003005853.1 4045006 R 561229 CDS YP_003005854.1 251791133 8120030 complement(4046218..4047186) 1 NC_012912.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: eta:ETA_33390 vanillate O-demethylase oxidoreductase; ferredoxin 4047186 8120030 Dd1591_3566 Dickeya zeae Ech1591 ferredoxin YP_003005854.1 4046218 R 561229 CDS YP_003005855.1 251791134 8120031 complement(4047201..4048235) 1 NC_012912.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: kpe:KPK_2713 Rieske 2Fe-2S domain protein; Rieske (2Fe-2S) domain-containing protein 4048235 8120031 Dd1591_3567 Dickeya zeae Ech1591 Rieske (2Fe-2S) domain-containing protein YP_003005855.1 4047201 R 561229 CDS YP_003005856.1 251791135 8120032 4048389..4049327 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_33420 putative transcriptional regulator; LysR family transcriptional regulator 4049327 8120032 Dd1591_3568 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005856.1 4048389 D 561229 CDS YP_003005857.1 251791136 8120033 4049558..4050058 1 NC_012912.1 TIGRFAM: OHCU decarboxylase; KEGG: kpn:KPN_01665 hypothetical protein; OHCU decarboxylase 4050058 8120033 Dd1591_3569 Dickeya zeae Ech1591 OHCU decarboxylase YP_003005857.1 4049558 D 561229 CDS YP_003005858.1 251791137 8120034 4050055..4050387 1 NC_012912.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: eta:ETA_26140 transthyretin family protein; hydroxyisourate hydrolase 4050387 8120034 Dd1591_3570 Dickeya zeae Ech1591 hydroxyisourate hydrolase YP_003005858.1 4050055 D 561229 CDS YP_003005859.1 251791138 8120035 complement(4050400..4051062) 1 NC_012912.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: bja:blr7948 acetyltransferase; phosphonate metabolism protein 4051062 8120035 Dd1591_3571 Dickeya zeae Ech1591 phosphonate metabolism protein YP_003005859.1 4050400 R 561229 CDS YP_003005860.1 251791139 8120036 4051289..4052113 1 NC_012912.1 PFAM: Domain of unknown function DUF1868; KEGG: ccs:CCNA_01868 hypothetical protein; hypothetical protein 4052113 8120036 Dd1591_3572 Dickeya zeae Ech1591 hypothetical protein YP_003005860.1 4051289 D 561229 CDS YP_003005861.1 251791140 8120037 complement(4052299..4053861) 1 NC_012912.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA3941 alkyl hydroperoxide reductase subunit F; alkyl hydroperoxide reductase, F subunit 4053861 8120037 Dd1591_3573 Dickeya zeae Ech1591 alkyl hydroperoxide reductase, F subunit YP_003005861.1 4052299 R 561229 CDS YP_003005862.1 251791141 8120038 complement(4053935..4054498) 1 NC_012912.1 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C 4054498 8120038 Dd1591_3574 Dickeya zeae Ech1591 alkyl hydroperoxide reductase subunit C YP_003005862.1 4053935 R 561229 CDS YP_003005863.1 251791142 8120039 complement(4054603..4055601) 1 NC_012912.1 PFAM: transport system permease protein; KEGG: cko:CKO_00852 hypothetical protein; transport system permease protein 4055601 8120039 Dd1591_3575 Dickeya zeae Ech1591 transport system permease protein YP_003005863.1 4054603 R 561229 CDS YP_003005864.1 251791143 8120040 complement(4055601..4056593) 1 NC_012912.1 PFAM: periplasmic binding protein; KEGG: cko:CKO_00919 hypothetical protein; periplasmic binding protein 4056593 8120040 Dd1591_3576 Dickeya zeae Ech1591 periplasmic binding protein YP_003005864.1 4055601 R 561229 CDS YP_003005865.1 251791144 8120041 complement(4056590..4057405) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4254 putative iron(III) ABC transporter ATP-binding protein; ABC transporter 4057405 8120041 Dd1591_3577 Dickeya zeae Ech1591 ABC transporter YP_003005865.1 4056590 R 561229 CDS YP_003005866.1 251791145 8120042 4057650..4057892 1 NC_012912.1 KEGG: spe:Spro_3158 hypothetical protein; hypothetical protein 4057892 8120042 Dd1591_3578 Dickeya zeae Ech1591 hypothetical protein YP_003005866.1 4057650 D 561229 CDS YP_003005867.1 251791146 8120043 complement(4057911..4058534) 1 NC_012912.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: spe:Spro_0128 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4058534 8120043 Dd1591_3579 Dickeya zeae Ech1591 metal dependent phosphohydrolase YP_003005867.1 4057911 R 561229 CDS YP_003005868.1 251791147 8120044 complement(4059040..4060758) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA1683 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4060758 8120044 Dd1591_3580 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003005868.1 4059040 R 561229 CDS YP_003005869.1 251791148 8120045 complement(4061125..4061877) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aca:ACP_2417 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 4061877 8120045 Dd1591_3581 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005869.1 4061125 R 561229 CDS YP_003005870.1 251791149 8120046 complement(4061911..4062630) 1 NC_012912.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: eca:ECA0474 enterobactin synthetase component D (4'-phosphopantetheinyl transferase); 4'-phosphopantetheinyl transferase 4062630 8120046 Dd1591_3582 Dickeya zeae Ech1591 4'-phosphopantetheinyl transferase YP_003005870.1 4061911 R 561229 CDS YP_003005871.1 251791150 8120047 complement(4063091..4063963) 1 NC_012912.1 PFAM: TatD-related deoxyribonuclease; KEGG: eca:ECA0472 TatD family deoxyribonuclease; TatD-related deoxyribonuclease 4063963 8120047 Dd1591_3583 Dickeya zeae Ech1591 TatD-related deoxyribonuclease YP_003005871.1 4063091 R 561229 CDS YP_003005872.1 251791151 8120048 complement(4063973..4064164) 1 NC_012912.1 KEGG: eca:ECA0471 hypothetical protein; hypothetical protein 4064164 8120048 Dd1591_3584 Dickeya zeae Ech1591 hypothetical protein YP_003005872.1 4063973 R 561229 CDS YP_003005873.1 251791152 8120049 complement(4064301..4064957) 1 NC_012912.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: eca:ECA0469 periplasmic protein; periplasmic protein 4064957 8120049 Dd1591_3585 Dickeya zeae Ech1591 periplasmic protein YP_003005873.1 4064301 R 561229 CDS YP_003005874.1 251791153 8120050 complement(4065315..4066904) 1 NC_012912.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: spe:Spro_0652 peptide chain release factor 3; peptide chain release factor 3 4066904 8120050 Dd1591_3586 Dickeya zeae Ech1591 peptide chain release factor 3 YP_003005874.1 4065315 R 561229 CDS YP_003005875.1 251791154 8120051 complement(4067281..4067961) 1 NC_012912.1 KEGG: eca:ECA0466 hypothetical protein; hypothetical protein 4067961 8120051 Dd1591_3587 Dickeya zeae Ech1591 hypothetical protein YP_003005875.1 4067281 R 561229 CDS YP_003005876.1 251791155 8120052 4068088..4069065 1 NC_012912.1 catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 4069065 serB 8120052 serB Dickeya zeae Ech1591 phosphoserine phosphatase YP_003005876.1 4068088 D 561229 CDS YP_003005877.1 251791156 8120053 4069131..4070516 1 NC_012912.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 4070516 8120053 Dd1591_3589 Dickeya zeae Ech1591 DNA repair protein RadA YP_003005877.1 4069131 D 561229 CDS YP_003005878.1 251791157 8120054 4070588..4071844 1 NC_012912.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 4071844 8120054 Dd1591_3590 Dickeya zeae Ech1591 nicotinamide-nucleotide adenylyltransferase YP_003005878.1 4070588 D 561229 CDS YP_003005879.1 251791158 8120055 complement(4071859..4072473) 1 NC_012912.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: eca:ECA0462 putative 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 4072473 8120055 Dd1591_3591 Dickeya zeae Ech1591 5-formyltetrahydrofolate cyclo-ligase YP_003005879.1 4071859 R 561229 CDS YP_003005880.1 251791159 8120057 complement(4072780..4073109) 1 NC_012912.1 PFAM: protein of unknown function DUF710; KEGG: yen:YE3398 Z-ring-associated protein; Z-ring-associated protein 4073109 8120057 Dd1591_3592 Dickeya zeae Ech1591 Z-ring-associated protein YP_003005880.1 4072780 R 561229 CDS YP_003005881.1 251791160 8120058 4073437..4074027 1 NC_012912.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein 4074027 8120058 Dd1591_3593 Dickeya zeae Ech1591 hypothetical protein YP_003005881.1 4073437 D 561229 CDS YP_003005882.1 251791161 8120059 4074065..4075393 1 NC_012912.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II 4075393 8120059 Dd1591_3594 Dickeya zeae Ech1591 proline aminopeptidase P II YP_003005882.1 4074065 D 561229 CDS YP_003005883.1 251791162 8120060 4075390..4076568 1 NC_012912.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase 4076568 8120060 Dd1591_3595 Dickeya zeae Ech1591 2-octaprenyl-6-methoxyphenyl hydroxylase YP_003005883.1 4075390 D 561229 CDS YP_003005884.1 251791163 8117427 4076590..4077801 1 NC_012912.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: eca:ECA0457 hypothetical protein; hypothetical protein 4077801 8117427 Dd1591_3596 Dickeya zeae Ech1591 hypothetical protein YP_003005884.1 4076590 D 561229 CDS YP_003005885.1 251791164 8117428 4078465..4078815 1 NC_012912.1 KEGG: ecm:EcSMS35_A0112 colicin-M immunity protein Cmi; hypothetical protein 4078815 8117428 Dd1591_3597 Dickeya zeae Ech1591 hypothetical protein YP_003005885.1 4078465 D 561229 CDS YP_003005886.1 251791165 8117430 complement(4079448..4081205) 1 NC_012912.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SM_b20079 putative hemolysin-adenlyate cyclase protein; Hemolysin-type calcium-binding region 4081205 8117430 Dd1591_3599 Dickeya zeae Ech1591 Hemolysin-type calcium-binding region YP_003005886.1 4079448 R 561229 CDS YP_003005887.1 251791166 8117431 complement(4081209..4081574) 1 NC_012912.1 hypothetical protein 4081574 8117431 Dd1591_3600 Dickeya zeae Ech1591 hypothetical protein YP_003005887.1 4081209 R 561229 CDS YP_003005888.1 251791167 8117432 complement(4081571..4082368) 1 NC_012912.1 hypothetical protein 4082368 8117432 Dd1591_3601 Dickeya zeae Ech1591 hypothetical protein YP_003005888.1 4081571 R 561229 CDS YP_003005889.1 251791168 8117433 complement(4082535..4082747) 1 NC_012912.1 KEGG: ypi:YpsIP31758_2860 hypothetical protein; hypothetical protein 4082747 8117433 Dd1591_3602 Dickeya zeae Ech1591 hypothetical protein YP_003005889.1 4082535 R 561229 CDS YP_003005890.1 251791169 8117434 4082928..4084556 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0448 putative ABC transporter extracellular solute binding protein; extracellular solute-binding protein family 5 4084556 8117434 Dd1591_3603 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003005890.1 4082928 D 561229 CDS YP_003005891.1 251791170 8117435 4084534..4085499 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0447 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 4085499 8117435 Dd1591_3604 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005891.1 4084534 D 561229 CDS YP_003005892.1 251791171 8117436 4085489..4086400 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0446 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 4086400 8117436 Dd1591_3605 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005892.1 4085489 D 561229 CDS YP_003005893.1 251791172 8117437 4086397..4088097 1 NC_012912.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: eca:ECA0445 ABC transporter ATP binding protein; ABC transporter 4088097 8117437 Dd1591_3606 Dickeya zeae Ech1591 ABC transporter YP_003005893.1 4086397 D 561229 CDS YP_003005894.1 251791173 8117438 complement(4088338..4089192) 1 NC_012912.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA0442 L-rhamnose operon transcriptional activator; AraC family transcriptional regulator 4089192 8117438 Dd1591_3607 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003005894.1 4088338 R 561229 CDS YP_003005895.1 251791174 8117439 complement(4089363..4090199) 1 NC_012912.1 activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 4090199 8117439 Dd1591_3608 Dickeya zeae Ech1591 transcriptional activator RhaS YP_003005895.1 4089363 R 561229 CDS YP_003005896.1 251791175 8117440 4090549..4092021 1 NC_012912.1 catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase 4092021 rhaB 8117440 rhaB Dickeya zeae Ech1591 rhamnulokinase YP_003005896.1 4090549 D 561229 CDS YP_003005897.1 251791176 8117441 4092018..4093274 1 NC_012912.1 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 4093274 8117441 Dd1591_3610 Dickeya zeae Ech1591 L-rhamnose isomerase YP_003005897.1 4092018 D 561229 CDS YP_003005898.1 251791177 8117442 4093298..4094128 1 NC_012912.1 KEGG: eca:ECA0438 rhamnulose-1-phosphate aldolase; TIGRFAM: rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; rhamnulose-1-phosphate aldolase 4094128 8117442 Dd1591_3611 Dickeya zeae Ech1591 rhamnulose-1-phosphate aldolase YP_003005898.1 4093298 D 561229 CDS YP_003005899.1 251791178 8117443 4094345..4094659 1 NC_012912.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: ecl:EcolC_4116 L-rhamnose 1-epimerase; L-rhamnose 1-epimerase 4094659 8117443 Dd1591_3612 Dickeya zeae Ech1591 L-rhamnose 1-epimerase YP_003005899.1 4094345 D 561229 CDS YP_003005900.1 251791179 8117444 4095105..4096697 1 NC_012912.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA0436 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4096697 8117444 Dd1591_3613 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003005900.1 4095105 D 561229 CDS YP_003005901.1 251791180 8117445 complement(4096794..4097600) 1 NC_012912.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: seg:SG3764 putative transcriptional regulator; IclR family transcriptional regulator 4097600 8117445 Dd1591_3614 Dickeya zeae Ech1591 IclR family transcriptional regulator YP_003005901.1 4096794 R 561229 CDS YP_003005902.1 251791181 8117446 complement(4097747..4098457) 1 NC_012912.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: plu:plu0518 hypothetical protein; metal dependent phosphohydrolase 4098457 8117446 Dd1591_3615 Dickeya zeae Ech1591 metal dependent phosphohydrolase YP_003005902.1 4097747 R 561229 CDS YP_003005903.1 251791182 8117447 4099143..4100372 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: pmr:PMI3395 MFS-family transporter; major facilitator superfamily protein 4100372 8117447 Dd1591_3616 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005903.1 4099143 D 561229 CDS YP_003005904.1 251791183 8117448 complement(4100487..4101947) 1 NC_012912.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: spe:Spro_1811 TrkH family potassium uptake protein; potassium uptake protein, TrkH family 4101947 8117448 Dd1591_3617 Dickeya zeae Ech1591 potassium uptake protein, TrkH family YP_003005904.1 4100487 R 561229 CDS YP_003005905.1 251791184 8117449 4102530..4103060 1 NC_012912.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 4103060 8117449 Dd1591_3618 Dickeya zeae Ech1591 chorismate mutase YP_003005905.1 4102530 D 561229 CDS YP_003005906.1 251791185 8117450 4103230..4103754 1 NC_012912.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rso:RS05577 transcription regulator protein; AsnC family transcriptional regulator 4103754 8117450 Dd1591_3619 Dickeya zeae Ech1591 AsnC family transcriptional regulator YP_003005906.1 4103230 D 561229 CDS YP_003005907.1 251791186 8117451 4104304..4105506 1 NC_012912.1 KEGG: aca:ACP_3248 hypothetical protein; hypothetical protein 4105506 8117451 Dd1591_3620 Dickeya zeae Ech1591 hypothetical protein YP_003005907.1 4104304 D 561229 CDS YP_003005908.1 251791187 8117452 complement(4105675..4106328) 1 NC_012912.1 KEGG: plu:plu3301 hypothetical protein; hypothetical protein 4106328 8117452 Dd1591_3621 Dickeya zeae Ech1591 hypothetical protein YP_003005908.1 4105675 R 561229 CDS YP_003005909.1 251791188 8117453 complement(4106325..4107416) 1 NC_012912.1 PFAM: SMC domain protein; KEGG: plu:plu3302 hypothetical protein; SMC domain-containing protein 4107416 8117453 Dd1591_3622 Dickeya zeae Ech1591 SMC domain-containing protein YP_003005909.1 4106325 R 561229 CDS YP_003005910.1 251791189 8117454 complement(4108130..4109146) 1 NC_012912.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 4109146 8117454 Dd1591_3623 Dickeya zeae Ech1591 1-aminocyclopropane-1-carboxylate deaminase YP_003005910.1 4108130 R 561229 CDS YP_003005911.1 251791190 8117455 complement(4109392..4110324) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2075 LysR family transcriptional regulator; LysR family transcriptional regulator 4110324 8117455 Dd1591_3624 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005911.1 4109392 R 561229 CDS YP_003005912.1 251791191 8117456 complement(4110718..4112136) 1 NC_012912.1 PFAM: peptidase M20; KEGG: bcm:Bcenmc03_1567 peptidase M20; hypothetical protein 4112136 8117456 Dd1591_3625 Dickeya zeae Ech1591 hypothetical protein YP_003005912.1 4110718 R 561229 CDS YP_003005913.1 251791192 8117457 complement(4112172..4113035) 1 NC_012912.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: vei:Veis_4730 ABC transporter related; ABC transporter 4113035 8117457 Dd1591_3626 Dickeya zeae Ech1591 ABC transporter YP_003005913.1 4112172 R 561229 CDS YP_003005914.1 251791193 8117458 complement(4113032..4114006) 1 NC_012912.1 KEGG: vei:Veis_4731 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase 4114006 8117458 Dd1591_3627 Dickeya zeae Ech1591 peptide ABC transporter ATPase YP_003005914.1 4113032 R 561229 CDS YP_003005915.1 251791194 8117459 complement(4114108..4115034) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_3822 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4115034 8117459 Dd1591_3628 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005915.1 4114108 R 561229 CDS YP_003005916.1 251791195 8117460 complement(4115044..4115961) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_3823 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4115961 8117460 Dd1591_3629 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003005916.1 4115044 R 561229 CDS YP_003005917.1 251791196 8117461 complement(4116007..4117551) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_4734 extracellular solute-binding protein; extracellular solute-binding protein family 5 4117551 8117461 Dd1591_3630 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003005917.1 4116007 R 561229 CDS YP_003005918.1 251791197 8117462 4118371..4119006 1 NC_012912.1 PFAM: delta-endotoxin CytB; KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); delta-endotoxin CytB 4119006 8117462 Dd1591_3631 Dickeya zeae Ech1591 delta-endotoxin CytB YP_003005918.1 4118371 D 561229 CDS YP_003005919.1 251791198 8117463 4119077..4119676 1 NC_012912.1 KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); hypothetical protein 4119676 8117463 Dd1591_3632 Dickeya zeae Ech1591 hypothetical protein YP_003005919.1 4119077 D 561229 CDS YP_003005920.1 251791199 8117464 4119711..4120322 1 NC_012912.1 KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); hypothetical protein 4120322 8117464 Dd1591_3633 Dickeya zeae Ech1591 hypothetical protein YP_003005920.1 4119711 D 561229 CDS YP_003005921.1 251791200 8117465 4120388..4121050 1 NC_012912.1 KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); cytolytic delta-endotoxin 4121050 8117465 Dd1591_3634 Dickeya zeae Ech1591 cytolytic delta-endotoxin YP_003005921.1 4120388 D 561229 CDS YP_003005922.1 251791201 8117466 complement(4121134..4121931) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpe:KPK_3986 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 4121931 8117466 Dd1591_3635 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005922.1 4121134 R 561229 CDS YP_003005923.1 251791202 8117467 complement(4121942..4123453) 1 NC_012912.1 PFAM: carbohydrate kinase FGGY; KEGG: kpe:KPK_3981 putative glycerol kinase; carbohydrate kinase FGGY 4123453 8117467 Dd1591_3636 Dickeya zeae Ech1591 carbohydrate kinase FGGY YP_003005923.1 4121942 R 561229 CDS YP_003005924.1 251791203 8117468 complement(4123446..4124513) 1 NC_012912.1 PFAM: inner-membrane translocator; KEGG: efe:EFER_2521 putative transport system permease for a carbohydrate-related molecule; inner-membrane translocator 4124513 8117468 Dd1591_3637 Dickeya zeae Ech1591 inner-membrane translocator YP_003005924.1 4123446 R 561229 CDS YP_003005925.1 251791204 8117469 complement(4124530..4126128) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: efe:EFER_2520 putative transport system ATP-binding protein for a carbohydrate-related molecule; ABC transporter 4126128 8117469 Dd1591_3638 Dickeya zeae Ech1591 ABC transporter YP_003005925.1 4124530 R 561229 CDS YP_003005926.1 251791205 8117470 complement(4126128..4126751) 1 NC_012912.1 KEGG: efe:EFER_2519 putative lipoprotein; putative lipoprotein 4126751 8117470 Dd1591_3639 Dickeya zeae Ech1591 putative lipoprotein YP_003005926.1 4126128 R 561229 CDS YP_003005927.1 251791206 8117471 complement(4126796..4127731) 1 NC_012912.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpe:KPK_3982 sugar ABC transporter, periplasmic sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 4127731 8117471 Dd1591_3640 Dickeya zeae Ech1591 periplasmic binding protein/LacI transcriptional regulator YP_003005927.1 4126796 R 561229 CDS YP_003005928.1 251791207 8117472 complement(4127824..4128627) 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bov:BOV_1573 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4128627 8117472 Dd1591_3641 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003005928.1 4127824 R 561229 CDS YP_003005929.1 251791208 8117473 complement(4128641..4129564) 1 NC_012912.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: ypg:YpAngola_A0910 putative transketolase, C-terminal subunit; transketolase central region 4129564 8117473 Dd1591_3642 Dickeya zeae Ech1591 transketolase central region YP_003005929.1 4128641 R 561229 CDS YP_003005930.1 251791209 8117474 complement(4129564..4130367) 1 NC_012912.1 PFAM: Transketolase domain protein; KEGG: pst:PSPTO_2401 transketolase, N-terminal subunit; transketolase domain-containing protein 4130367 8117474 Dd1591_3643 Dickeya zeae Ech1591 transketolase domain-containing protein YP_003005930.1 4129564 R 561229 CDS YP_003005931.1 251791210 8117475 4130744..4131535 1 NC_012912.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: sml:Smlt4437 putative aga operon DeoR family transcriptional repressor; DeoR family transcriptional regulator 4131535 8117475 Dd1591_3644 Dickeya zeae Ech1591 DeoR family transcriptional regulator YP_003005931.1 4130744 D 561229 CDS YP_003005932.1 251791211 8117476 4131656..4132816 1 NC_012912.1 PFAM: SMC domain protein; KEGG: hch:HCH_03469 ATPase; SMC domain-containing protein 4132816 8117476 Dd1591_3645 Dickeya zeae Ech1591 SMC domain-containing protein YP_003005932.1 4131656 D 561229 CDS YP_003005933.1 251791212 8117477 4132813..4133436 1 NC_012912.1 KEGG: rru:Rru_A3750 hypothetical protein; hypothetical protein 4133436 8117477 Dd1591_3646 Dickeya zeae Ech1591 hypothetical protein YP_003005933.1 4132813 D 561229 CDS YP_003005934.1 251791213 8117478 complement(4133495..4134832) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2121 major facilitator transporter; major facilitator superfamily protein 4134832 8117478 Dd1591_3647 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005934.1 4133495 R 561229 CDS YP_003005935.1 251791214 8117479 4135101..4135898 1 NC_012912.1 KEGG: eca:ECA0432 hypothetical protein; hypothetical protein 4135898 8117479 Dd1591_3648 Dickeya zeae Ech1591 hypothetical protein YP_003005935.1 4135101 D 561229 CDS YP_003005936.1 251791215 8117480 4136231..4136854 1 NC_012912.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: msu:MS2252 hypothetical protein; lysine exporter protein LysE/YggA 4136854 8117480 Dd1591_3649 Dickeya zeae Ech1591 lysine exporter protein LysE/YggA YP_003005936.1 4136231 D 561229 CDS YP_003005937.1 251791216 8117481 complement(4136956..4138236) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA2480 ABC transporter permease; major facilitator superfamily protein 4138236 8117481 Dd1591_3650 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003005937.1 4136956 R 561229 CDS YP_003005938.1 251791217 8117482 complement(4138247..4139185) 1 NC_012912.1 hypothetical protein 4139185 8117482 Dd1591_3651 Dickeya zeae Ech1591 hypothetical protein YP_003005938.1 4138247 R 561229 CDS YP_003005939.1 251791218 8117483 complement(4139182..4139475) 1 NC_012912.1 hypothetical protein 4139475 8117483 Dd1591_3652 Dickeya zeae Ech1591 hypothetical protein YP_003005939.1 4139182 R 561229 CDS YP_003005940.1 251791219 8117484 complement(4139479..4140714) 1 NC_012912.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rso:RS03119 putative transmembrane protein; monooxygenase FAD-binding 4140714 8117484 Dd1591_3653 Dickeya zeae Ech1591 monooxygenase FAD-binding YP_003005940.1 4139479 R 561229 CDS YP_003005941.1 251791220 8117485 complement(4140719..4142038) 1 NC_012912.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 4142038 8117485 Dd1591_3654 Dickeya zeae Ech1591 diaminobutyrate--2-oxoglutarate aminotransferase YP_003005941.1 4140719 R 561229 CDS YP_003005942.1 251791221 8117486 complement(4142091..4143431) 1 NC_012912.1 KEGG: pfl:PFL_4989 lysine N6-hydroxylase/L-ornithine N5-oxygenase family protein; lysine N6-hydroxylase/L-ornithine N5-oxygenase family protein 4143431 8117486 Dd1591_3655 Dickeya zeae Ech1591 lysine N6-hydroxylase/L-ornithine N5-oxygenase family protein YP_003005942.1 4142091 R 561229 CDS YP_003005943.1 251791222 8117487 complement(4143579..4143947) 1 NC_012912.1 KEGG: rso:RS03116 hypothetical protein; hypothetical protein 4143947 8117487 Dd1591_3656 Dickeya zeae Ech1591 hypothetical protein YP_003005943.1 4143579 R 561229 CDS YP_003005944.1 251791223 8117488 complement(4144076..4144477) 1 NC_012912.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: esa:ESA_03980 hypothetical protein; Rhodanese domain-containing protein 4144477 8117488 Dd1591_3657 Dickeya zeae Ech1591 Rhodanese domain-containing protein YP_003005944.1 4144076 R 561229 CDS YP_003005945.1 251791224 8117489 complement(4144490..4145374) 1 NC_012912.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ypi:YpsIP31758_2079 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase fold-3 domain-containing protein 4145374 8117489 Dd1591_3658 Dickeya zeae Ech1591 alpha/beta hydrolase fold-3 domain-containing protein YP_003005945.1 4144490 R 561229 CDS YP_003005946.1 251791225 8117490 complement(4145387..4146319) 1 NC_012912.1 KEGG: esa:ESA_03981 hypothetical protein; hypothetical protein 4146319 8117490 Dd1591_3659 Dickeya zeae Ech1591 hypothetical protein YP_003005946.1 4145387 R 561229 CDS YP_003005947.1 251791226 8117491 complement(4146316..4147374) 1 NC_012912.1 PFAM: FAD dependent oxidoreductase; KEGG: rso:RS03111 putative oxidoreductase signal peptide protein; FAD dependent oxidoreductase 4147374 8117491 Dd1591_3660 Dickeya zeae Ech1591 FAD dependent oxidoreductase YP_003005947.1 4146316 R 561229 CDS YP_003005948.1 251791227 8117492 complement(4147374..4148030) 1 NC_012912.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rso:RS03110 hypothetical protein; Cupin 2 barrel domain-containing protein 4148030 8117492 Dd1591_3661 Dickeya zeae Ech1591 Cupin 2 barrel domain-containing protein YP_003005948.1 4147374 R 561229 CDS YP_003005949.1 251791228 8117493 complement(4148040..4149671) 1 NC_012912.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS03108 hypothetical protein; amino acid adenylation domain-containing protein 4149671 8117493 Dd1591_3662 Dickeya zeae Ech1591 amino acid adenylation domain-containing protein YP_003005949.1 4148040 R 561229 CDS YP_003005950.1 251791229 8117494 complement(4149689..4150978) 1 NC_012912.1 KEGG: rso:RS03107 putative transmembrane protein; putative transmembrane protein 4150978 8117494 Dd1591_3663 Dickeya zeae Ech1591 putative transmembrane protein YP_003005950.1 4149689 R 561229 CDS YP_003005951.1 251791230 8117495 complement(4150966..4151439) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS03106 putative acetyltransferase protein; GCN5-related N-acetyltransferase 4151439 8117495 Dd1591_3664 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005951.1 4150966 R 561229 CDS YP_003005952.1 251791231 8117496 complement(4151430..4151891) 1 NC_012912.1 KEGG: rso:RS03105 hypothetical protein; hypothetical protein 4151891 8117496 Dd1591_3665 Dickeya zeae Ech1591 hypothetical protein YP_003005952.1 4151430 R 561229 CDS YP_003005953.1 251791232 8117497 complement(4151878..4153338) 1 NC_012912.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 4153338 8117497 Dd1591_3666 Dickeya zeae Ech1591 methionyl-tRNA synthetase YP_003005953.1 4151878 R 561229 CDS YP_003005954.1 251791233 8117498 complement(4153934..4154737) 1 NC_012912.1 hypothetical protein 4154737 8117498 Dd1591_3667 Dickeya zeae Ech1591 hypothetical protein YP_003005954.1 4153934 R 561229 CDS YP_003005955.1 251791234 8117499 4155005..4155607 1 NC_012912.1 KEGG: eca:ECA0829 hypothetical protein; hypothetical protein 4155607 8117499 Dd1591_3668 Dickeya zeae Ech1591 hypothetical protein YP_003005955.1 4155005 D 561229 CDS YP_003005956.1 251791235 8117500 complement(4156219..4157529) 1 NC_012912.1 KEGG: efe:EFER_3104 putative 5-methylcytosine restriction system component; putative 5-methylcytosine restriction system component 4157529 8117500 Dd1591_3669 Dickeya zeae Ech1591 putative 5-methylcytosine restriction system component YP_003005956.1 4156219 R 561229 CDS YP_003005957.1 251791236 8117501 complement(4157522..4159579) 1 NC_012912.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: efe:EFER_3105 putative 5-methylcytosine-specific restriction enzyme with GTPase activity; ATPase 4159579 8117501 Dd1591_3670 Dickeya zeae Ech1591 ATPase YP_003005957.1 4157522 R 561229 CDS YP_003005958.1 251791237 8117502 4159901..4163425 1 NC_012912.1 restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R 4163425 hsdR 8117502 hsdR Dickeya zeae Ech1591 type I restriction enzyme EcoKI subunit R YP_003005958.1 4159901 D 561229 CDS YP_003005959.1 251791238 8117503 4163504..4165105 1 NC_012912.1 PFAM: N-6 DNA methylase; putative RNA methylase; KEGG: maq:Maqu_0031 N-6 DNA methylase; Site-specific DNA-methyltransferase (adenine-specific) 4165105 8117503 Dd1591_3672 Dickeya zeae Ech1591 Site-specific DNA-methyltransferase (adenine-specific) YP_003005959.1 4163504 D 561229 CDS YP_003005960.1 251791239 8117504 4165105..4166484 1 NC_012912.1 PFAM: restriction modification system DNA specificity domain; KEGG: stm:STM4524 type I restriction enzyme specificity protein; restriction modification system DNA specificity domain-containing protein 4166484 8117504 Dd1591_3673 Dickeya zeae Ech1591 restriction modification system DNA specificity domain-containing protein YP_003005960.1 4165105 D 561229 CDS YP_003005961.1 251791240 8117505 4166845..4167183 1 NC_012912.1 KEGG: eca:ECA0128 hypothetical protein; hypothetical protein 4167183 8117505 Dd1591_3674 Dickeya zeae Ech1591 hypothetical protein YP_003005961.1 4166845 D 561229 CDS YP_003005962.1 251791241 8117506 complement(4167429..4168823) 1 NC_012912.1 KEGG: sbl:Sbal_4387 hypothetical protein; hypothetical protein 4168823 8117506 Dd1591_3675 Dickeya zeae Ech1591 hypothetical protein YP_003005962.1 4167429 R 561229 CDS YP_003005963.1 251791242 8120674 complement(4168829..4169677) 1 NC_012912.1 PFAM: Pirin domain protein; KEGG: pzu:PHZ_c1158 pirin-related protein; Pirin domain-containing protein 4169677 8120674 Dd1591_3676 Dickeya zeae Ech1591 Pirin domain-containing protein YP_003005963.1 4168829 R 561229 CDS YP_003005964.1 251791243 8120675 complement(4170009..4170866) 1 NC_012912.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ara:Arad_4435 transporter; hypothetical protein 4170866 8120675 Dd1591_3677 Dickeya zeae Ech1591 hypothetical protein YP_003005964.1 4170009 R 561229 CDS YP_003005965.1 251791244 8120676 complement(4170863..4171039) 1 NC_012912.1 hypothetical protein 4171039 8120676 Dd1591_3678 Dickeya zeae Ech1591 hypothetical protein YP_003005965.1 4170863 R 561229 CDS YP_003005966.1 251791245 8120677 4171095..4172015 1 NC_012912.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppw:PputW619_2824 LysR family transcriptional regulator; LysR family transcriptional regulator 4172015 8120677 Dd1591_3679 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003005966.1 4171095 D 561229 CDS YP_003005967.1 251791246 8120678 complement(4172124..4172528) 1 NC_012912.1 PFAM: PilT protein domain protein; KEGG: eca:ECA2850 putative plasmid protein; PilT protein domain-containing protein 4172528 8120678 Dd1591_3680 Dickeya zeae Ech1591 PilT protein domain-containing protein YP_003005967.1 4172124 R 561229 CDS YP_003005968.1 251791247 8120679 complement(4172528..4172758) 1 NC_012912.1 KEGG: eca:ECA2851 putative plasmid protein; putative plasmid protein 4172758 8120679 Dd1591_3681 Dickeya zeae Ech1591 putative plasmid protein YP_003005968.1 4172528 R 561229 CDS YP_003005969.1 251791248 8120680 complement(4173238..4174311) 1 NC_012912.1 PFAM: Patatin; KEGG: eck:EC55989_2255 hypothetical protein; Patatin 4174311 8120680 Dd1591_3682 Dickeya zeae Ech1591 Patatin YP_003005969.1 4173238 R 561229 CDS YP_003005970.1 251791249 8120681 complement(4174308..4175213) 1 NC_012912.1 KEGG: ecz:ECS88_2093 hypothetical protein; hypothetical protein 4175213 8120681 Dd1591_3683 Dickeya zeae Ech1591 hypothetical protein YP_003005970.1 4174308 R 561229 CDS YP_003005971.1 251791250 8120682 complement(4175210..4177594) 1 NC_012912.1 KEGG: ecp:ECP_2038 hypothetical protein; hypothetical protein 4177594 8120682 Dd1591_3684 Dickeya zeae Ech1591 hypothetical protein YP_003005971.1 4175210 R 561229 CDS YP_003005972.1 251791251 8120683 4177729..4177929 1 NC_012912.1 PFAM: Insertion element protein; KEGG: ecz:ECS88_4707 transposase InsA (ORF1) IS1; Insertion element protein 4177929 8120683 Dd1591_3685 Dickeya zeae Ech1591 Insertion element protein YP_003005972.1 4177729 D 561229 CDS YP_003005973.1 251791252 8120684 complement(4178429..4178557) 1 NC_012912.1 hypothetical protein 4178557 8120684 Dd1591_3686 Dickeya zeae Ech1591 hypothetical protein YP_003005973.1 4178429 R 561229 CDS YP_003005974.1 251791253 8120685 4178817..4179062 1 NC_012912.1 hypothetical protein 4179062 8120685 Dd1591_3687 Dickeya zeae Ech1591 hypothetical protein YP_003005974.1 4178817 D 561229 CDS YP_003005975.1 251791254 8120687 complement(4180084..4180398) 1 NC_012912.1 PFAM: protein of unknown function DUF1219; KEGG: eca:ECA2853 hypothetical protein; hypothetical protein 4180398 8120687 Dd1591_3689 Dickeya zeae Ech1591 hypothetical protein YP_003005975.1 4180084 R 561229 CDS YP_003005976.1 251791255 8120689 4180726..4181598 1 NC_012912.1 KEGG: plu:plu4325 hypothetical protein; hypothetical protein 4181598 8120689 Dd1591_3691 Dickeya zeae Ech1591 hypothetical protein YP_003005976.1 4180726 D 561229 CDS YP_003005977.1 251791256 8120690 complement(4181759..4182907) 1 NC_012912.1 PFAM: protein of unknown function DUF87; KEGG: pst:PSPTO_4332 hypothetical protein; hypothetical protein 4182907 8120690 Dd1591_3692 Dickeya zeae Ech1591 hypothetical protein YP_003005977.1 4181759 R 561229 CDS YP_003005978.1 251791257 8120691 complement(4183041..4184204) 1 NC_012912.1 KEGG: pst:PSPTO_4326 hypothetical protein; hypothetical protein 4184204 8120691 Dd1591_3693 Dickeya zeae Ech1591 hypothetical protein YP_003005978.1 4183041 R 561229 CDS YP_003005979.1 251791258 8120692 complement(4184435..4184758) 1 NC_012912.1 SMART: helix-turn-helix domain protein; KEGG: plu:plu4466 hypothetical protein; XRE family transcriptional regulator 4184758 8120692 Dd1591_3694 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003005979.1 4184435 R 561229 CDS YP_003005980.1 251791259 8120693 complement(4184742..4185101) 1 NC_012912.1 PFAM: protein of unknown function DUF1044; KEGG: plu:plu4467 hypothetical protein; hypothetical protein 4185101 8120693 Dd1591_3695 Dickeya zeae Ech1591 hypothetical protein YP_003005980.1 4184742 R 561229 CDS YP_003005981.1 251791260 8120695 4187022..4187225 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: ypg:YpAngola_A1363 AlpA family transcriptional regulator; phage transcriptional regulator AlpA 4187225 8120695 Dd1591_3697 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003005981.1 4187022 D 561229 CDS YP_003005982.1 251791261 8120696 4187222..4187758 1 NC_012912.1 KEGG: ypp:YPDSF_2605 prophage protein; prophage protein 4187758 8120696 Dd1591_3698 Dickeya zeae Ech1591 prophage protein YP_003005982.1 4187222 D 561229 CDS YP_003005983.1 251791262 8120697 4187751..4189787 1 NC_012912.1 PFAM: P4 alpha zinc-binding domain protein; TOPRIM domain protein; SMART: P4 alpha zinc-binding domain protein; Toprim sub domain protein; KEGG: plu:plu4471 hypothetical protein; P4 alpha zinc-binding domain-containing protein 4189787 8120697 Dd1591_3699 Dickeya zeae Ech1591 P4 alpha zinc-binding domain-containing protein YP_003005983.1 4187751 D 561229 CDS YP_003005984.1 251791263 8120698 complement(4190063..4191397) 1 NC_012912.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: sea:SeAg_B4814 protein HipA; HipA N-terminal domain-containing protein 4191397 8120698 Dd1591_3700 Dickeya zeae Ech1591 HipA N-terminal domain-containing protein YP_003005984.1 4190063 R 561229 CDS YP_003005985.1 251791264 8120699 complement(4191402..4191707) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sea:SeAg_B4813 putative transcriptionl regulator HipB; XRE family transcriptional regulator 4191707 8120699 Dd1591_3701 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003005985.1 4191402 R 561229 CDS YP_003005986.1 251791265 8120700 complement(4192028..4193284) 1 NC_012912.1 PFAM: integrase family protein; KEGG: plu:plu4477 hypothetical protein; integrase family protein 4193284 8120700 Dd1591_3702 Dickeya zeae Ech1591 integrase family protein YP_003005986.1 4192028 R 561229 CDS YP_003005987.1 251791266 8120701 4193827..4194078 1 NC_012912.1 PFAM: Protein of unknown function DUF1778; KEGG: ecf:ECH74115_4726 hypothetical protein; hypothetical protein 4194078 8120701 Dd1591_3703 Dickeya zeae Ech1591 hypothetical protein YP_003005987.1 4193827 D 561229 CDS YP_003005988.1 251791267 8120702 4194069..4194548 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ecf:ECH74115_4727 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase 4194548 8120702 Dd1591_3704 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003005988.1 4194069 D 561229 CDS YP_003005989.1 251791268 8120704 4195132..4195398 1 NC_012912.1 KEGG: plu:plu4474 hypothetical protein; putative transcriptional regulator Nlp 4195398 8120704 Dd1591_3706 Dickeya zeae Ech1591 putative transcriptional regulator Nlp YP_003005989.1 4195132 D 561229 CDS YP_003005990.1 251791269 8120705 complement(4195622..4197667) 1 NC_012912.1 PFAM: P4 alpha zinc-binding domain protein; TOPRIM domain protein; SMART: P4 alpha zinc-binding domain protein; Toprim sub domain protein; KEGG: plu:plu4471 hypothetical protein; P4 alpha zinc-binding domain-containing protein 4197667 8120705 Dd1591_3707 Dickeya zeae Ech1591 P4 alpha zinc-binding domain-containing protein YP_003005990.1 4195622 R 561229 CDS YP_003005991.1 251791270 8120706 complement(4197660..4198199) 1 NC_012912.1 KEGG: ypp:YPDSF_2605 prophage protein; prophage protein 4198199 8120706 Dd1591_3708 Dickeya zeae Ech1591 prophage protein YP_003005991.1 4197660 R 561229 CDS YP_003005992.1 251791271 8120707 complement(4198196..4198399) 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: ypn:YPN_2905 transcriptional regulator; phage transcriptional regulator AlpA 4198399 8120707 Dd1591_3709 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003005992.1 4198196 R 561229 CDS YP_003005993.1 251791272 8120708 complement(4198399..4199280) 1 NC_012912.1 KEGG: plu:plu4470 hypothetical protein; hypothetical protein 4199280 8120708 Dd1591_3710 Dickeya zeae Ech1591 hypothetical protein YP_003005993.1 4198399 R 561229 CDS YP_003005994.1 251791273 8120709 4200437..4200559 1 NC_012912.1 hypothetical protein 4200559 8120709 Dd1591_3711 Dickeya zeae Ech1591 hypothetical protein YP_003005994.1 4200437 D 561229 CDS YP_003005995.1 251791274 8120710 complement(4200548..4201207) 1 NC_012912.1 KEGG: see:SNSL254_A2838 hypothetical protein; hypothetical protein 4201207 8120710 Dd1591_3712 Dickeya zeae Ech1591 hypothetical protein YP_003005995.1 4200548 R 561229 CDS YP_003005996.1 251791275 8120711 complement(4201209..4201595) 1 NC_012912.1 KEGG: pmr:PMI0516 hypothetical protein; hypothetical protein 4201595 8120711 Dd1591_3713 Dickeya zeae Ech1591 hypothetical protein YP_003005996.1 4201209 R 561229 CDS YP_003005997.1 251791276 8120712 complement(4201588..4202433) 1 NC_012912.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: see:SNSL254_A2836 chromosome partitioning ATPase; Cobyrinic acid ac-diamide synthase 4202433 8120712 Dd1591_3714 Dickeya zeae Ech1591 Cobyrinic acid ac-diamide synthase YP_003005997.1 4201588 R 561229 CDS YP_003005998.1 251791277 8120713 4202692..4202889 1 NC_012912.1 hypothetical protein 4202889 8120713 Dd1591_3715 Dickeya zeae Ech1591 hypothetical protein YP_003005998.1 4202692 D 561229 CDS YP_003005999.1 251791278 8120715 complement(4203430..4204689) 1 NC_012912.1 PFAM: integrase family protein; KEGG: see:SNSL254_A4836 integrase; integrase family protein 4204689 8120715 Dd1591_3717 Dickeya zeae Ech1591 integrase family protein YP_003005999.1 4203430 R 561229 CDS YP_003006000.1 251791279 8120717 complement(4205217..4206287) 1 NC_012912.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sgl:SG2107 putative transport protein; permease YjgP/YjgQ family protein 4206287 8120717 Dd1591_3718 Dickeya zeae Ech1591 permease YjgP/YjgQ family protein YP_003006000.1 4205217 R 561229 CDS YP_003006001.1 251791280 8120718 complement(4206289..4207401) 1 NC_012912.1 PFAM: permease YjgP/YjgQ family protein; KEGG: eca:ECA0405 putative permease; permease YjgP/YjgQ family protein 4207401 8120718 Dd1591_3719 Dickeya zeae Ech1591 permease YjgP/YjgQ family protein YP_003006001.1 4206289 R 561229 CDS YP_003006002.1 251791281 8120719 4207684..4209192 1 NC_012912.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 4209192 8120719 Dd1591_3720 Dickeya zeae Ech1591 leucyl aminopeptidase YP_003006002.1 4207684 D 561229 CDS YP_003006003.1 251791282 8120720 4209304..4209753 1 NC_012912.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 4209753 8120720 Dd1591_3721 Dickeya zeae Ech1591 DNA polymerase III subunit chi YP_003006003.1 4209304 D 561229 CDS YP_003006004.1 251791283 8120721 4209767..4212622 1 NC_012912.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 4212622 valS 8120721 valS Dickeya zeae Ech1591 valyl-tRNA synthetase YP_003006004.1 4209767 D 561229 CDS YP_003006005.1 251791284 8120722 complement(4212774..4214393) 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0390 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4214393 8120722 Dd1591_3723 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003006005.1 4212774 R 561229 CDS YP_003006006.1 251791285 8120723 complement(4214551..4215618) 1 NC_012912.1 PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA0389 hypothetical protein; hypothetical protein 4215618 8120723 Dd1591_3724 Dickeya zeae Ech1591 hypothetical protein YP_003006006.1 4214551 R 561229 CDS YP_003006007.1 251791286 8120724 complement(4215940..4216422) 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pzu:PHZ_c0633 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase 4216422 8120724 Dd1591_3725 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003006007.1 4215940 R 561229 CDS YP_003006008.1 251791287 8120725 complement(4216450..4217037) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: spe:Spro_1454 XRE family transcriptional regulator; XRE family transcriptional regulator 4217037 8120725 Dd1591_3726 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003006008.1 4216450 R 561229 CDS YP_003006009.1 251791288 8120726 4217315..4217818 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0386 putative acetyltransferase; GCN5-related N-acetyltransferase 4217818 8120726 Dd1591_3727 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003006009.1 4217315 D 561229 CDS YP_003006010.1 251791289 8120727 complement(4217942..4219369) 1 NC_012912.1 KEGG: pfo:Pfl01_2665 hypothetical protein; hypothetical protein 4219369 8120727 Dd1591_3728 Dickeya zeae Ech1591 hypothetical protein YP_003006010.1 4217942 R 561229 CDS YP_003006011.1 251791290 8120728 complement(4219573..4220004) 1 NC_012912.1 PFAM: protein of unknown function DUF29; KEGG: plu:plu4118 hypothetical protein; hypothetical protein 4220004 8120728 Dd1591_3729 Dickeya zeae Ech1591 hypothetical protein YP_003006011.1 4219573 R 561229 CDS YP_003006012.1 251791291 8120730 complement(4220675..4221103) 1 NC_012912.1 PFAM: protein of unknown function DUF1260; KEGG: eca:ECA0385 hypothetical protein; hypothetical protein 4221103 8120730 Dd1591_3731 Dickeya zeae Ech1591 hypothetical protein YP_003006012.1 4220675 R 561229 CDS YP_003006013.1 251791292 8120731 4221266..4222282 1 NC_012912.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I 4222282 8120731 Dd1591_3732 Dickeya zeae Ech1591 ornithine carbamoyltransferase subunit I YP_003006013.1 4221266 D 561229 CDS YP_003006014.1 251791293 8120732 complement(4222378..4223814) 1 NC_012912.1 PFAM: glycoside hydrolase family 1; KEGG: vsp:VS_II0097 6-phospho-beta-glucosidase; glycoside hydrolase family 1 4223814 8120732 Dd1591_3733 Dickeya zeae Ech1591 glycoside hydrolase family 1 YP_003006014.1 4222378 R 561229 CDS YP_003006015.1 251791294 8120733 complement(4224036..4224503) 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA0383 hypothetical protein; hypothetical protein 4224503 8120733 Dd1591_3734 Dickeya zeae Ech1591 hypothetical protein YP_003006015.1 4224036 R 561229 CDS YP_003006016.1 251791295 8120734 4224915..4225850 1 NC_012912.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4225850 pyrB 8120734 pyrB Dickeya zeae Ech1591 aspartate carbamoyltransferase catalytic subunit YP_003006016.1 4224915 D 561229 CDS YP_003006017.1 251791296 8120735 4225867..4226331 1 NC_012912.1 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 4226331 8120735 Dd1591_3736 Dickeya zeae Ech1591 aspartate carbamoyltransferase regulatory subunit YP_003006017.1 4225867 D 561229 CDS YP_003006018.1 251791297 8120736 4226444..4226830 1 NC_012912.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: yen:YE3768 hypothetical protein; endoribonuclease L-PSP 4226830 8120736 Dd1591_3737 Dickeya zeae Ech1591 endoribonuclease L-PSP YP_003006018.1 4226444 D 561229 CDS YP_003006019.1 251791298 8120737 complement(4227041..4227646) 1 NC_012912.1 hypothetical protein 4227646 8120737 Dd1591_3738 Dickeya zeae Ech1591 hypothetical protein YP_003006019.1 4227041 R 561229 CDS YP_003006020.1 251791299 8120738 complement(4228349..4229689) 1 NC_012912.1 PFAM: Amidase; KEGG: bph:Bphy_7768 amidase; Amidase 4229689 8120738 Dd1591_3739 Dickeya zeae Ech1591 Amidase YP_003006020.1 4228349 R 561229 CDS YP_003006021.1 251791300 8120739 complement(4229774..4231465) 1 NC_012912.1 PFAM: amine oxidase; KEGG: bph:Bphy_7769 amine oxidase; amine oxidase 4231465 8120739 Dd1591_3740 Dickeya zeae Ech1591 amine oxidase YP_003006021.1 4229774 R 561229 CDS YP_003006022.1 251791301 8120741 complement(4231987..4232367) 1 NC_012912.1 KEGG: pmy:Pmen_0112 hypothetical protein; hypothetical protein 4232367 8120741 Dd1591_3742 Dickeya zeae Ech1591 hypothetical protein YP_003006022.1 4231987 R 561229 CDS YP_003006023.1 251791302 8120742 complement(4232632..4234227) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eta:ETA_23880 putative ATP-binding component of ABC transporter; ABC transporter 4234227 8120742 Dd1591_3743 Dickeya zeae Ech1591 ABC transporter YP_003006023.1 4232632 R 561229 CDS YP_003006024.1 251791303 8120743 complement(4234224..4235039) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_23890 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; binding-protein-dependent transport systems inner membrane component 4235039 8120743 Dd1591_3744 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006024.1 4234224 R 561229 CDS YP_003006025.1 251791304 8120744 complement(4235067..4236011) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_23900 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; binding-protein-dependent transport systems inner membrane component 4236011 8120744 Dd1591_3745 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006025.1 4235067 R 561229 CDS YP_003006026.1 251791305 8120745 complement(4236082..4237623) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_23910 ABC-type dipeptide transport system, periplasmic component (OphA), DdpA region; extracellular solute-binding protein family 5 4237623 8120745 Dd1591_3746 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003006026.1 4236082 R 561229 CDS YP_003006027.1 251791306 8120746 complement(4237698..4238606) 1 NC_012912.1 PFAM: homocysteine S-methyltransferase; KEGG: eta:ETA_23920 homocysteine S-methyltransferase family protein; homocysteine S-methyltransferase 4238606 8120746 Dd1591_3747 Dickeya zeae Ech1591 homocysteine S-methyltransferase YP_003006027.1 4237698 R 561229 CDS YP_003006028.1 251791307 8120747 4238994..4241132 1 NC_012912.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 4241132 8120747 Dd1591_3748 Dickeya zeae Ech1591 anaerobic ribonucleoside triphosphate reductase YP_003006028.1 4238994 D 561229 CDS YP_003006029.1 251791308 8120748 4241231..4241695 1 NC_012912.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: stt:t4485 anaerobic ribonucleotide reductase-activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 4241695 8120748 Dd1591_3749 Dickeya zeae Ech1591 anaerobic ribonucleoside-triphosphate reductase activating protein YP_003006029.1 4241231 D 561229 CDS YP_003006030.1 251791309 8120749 complement(4241762..4242214) 1 NC_012912.1 KEGG: eca:ECA0372 hypothetical protein; hypothetical protein 4242214 8120749 Dd1591_3750 Dickeya zeae Ech1591 hypothetical protein YP_003006030.1 4241762 R 561229 CDS YP_003006031.1 251791310 8120750 complement(4242498..4243013) 1 NC_012912.1 KEGG: ppu:PP_4152 hypothetical protein; hypothetical protein 4243013 8120750 Dd1591_3751 Dickeya zeae Ech1591 hypothetical protein YP_003006031.1 4242498 R 561229 CDS YP_003006032.1 251791311 8120751 complement(4243013..4243474) 1 NC_012912.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: plu:plu2268 hypothetical protein; DNA binding domain-containing protein, excisionase family 4243474 8120751 Dd1591_3752 Dickeya zeae Ech1591 DNA binding domain-containing protein, excisionase family YP_003006032.1 4243013 R 561229 CDS YP_003006033.1 251791312 8120753 complement(4244043..4245569) 1 NC_012912.1 TIGRFAM: CRISPR-associated protein, Cse1 family; KEGG: sew:SeSA_A3097 crispr-associated protein, CSE1 family; Cse1 family CRISPR-associated protein 4245569 8120753 Dd1591_3754 Dickeya zeae Ech1591 Cse1 family CRISPR-associated protein YP_003006033.1 4244043 R 561229 CDS YP_003006034.1 251791313 8117187 4246304..4247227 1 NC_012912.1 PFAM: PfkB domain protein; KEGG: eca:ECA0364 aminoimidazole riboside kinase; PfkB domain-containing protein 4247227 8117187 Dd1591_3755 Dickeya zeae Ech1591 PfkB domain-containing protein YP_003006034.1 4246304 D 561229 CDS YP_003006035.1 251791314 8117188 4247421..4249037 1 NC_012912.1 PFAM: porin LamB type; KEGG: eca:ECA0363 putative sucrose porin; porin LamB type 4249037 8117188 Dd1591_3756 Dickeya zeae Ech1591 porin LamB type YP_003006035.1 4247421 D 561229 CDS YP_003006036.1 251791315 8117189 4249108..4250478 1 NC_012912.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA0362 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC 4250478 8117189 Dd1591_3757 Dickeya zeae Ech1591 PTS system sucrose-specific transporter subunit IIBC YP_003006036.1 4249108 D 561229 CDS YP_003006037.1 251791316 8117190 4250478..4251890 1 NC_012912.1 KEGG: eca:ECA0361 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 4251890 8117190 Dd1591_3758 Dickeya zeae Ech1591 sucrose-6-phosphate hydrolase YP_003006037.1 4250478 D 561229 CDS YP_003006038.1 251791317 8117191 4251940..4252959 1 NC_012912.1 KEGG: eca:ECA0360 sucrose operon repressor; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 4252959 8117191 Dd1591_3759 Dickeya zeae Ech1591 LacI family transcriptional regulator YP_003006038.1 4251940 D 561229 CDS YP_003006039.1 251791318 8117192 complement(4253486..4253905) 1 NC_012912.1 TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: eca:ECA0359 biopolymer transport protein ExbD; TonB system transport protein ExbD 4253905 8117192 Dd1591_3760 Dickeya zeae Ech1591 TonB system transport protein ExbD YP_003006039.1 4253486 R 561229 CDS YP_003006040.1 251791319 8117193 complement(4253910..4254800) 1 NC_012912.1 TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: eca:ECA0358 biopolymer transport protein; tonB-system energizer ExbB 4254800 8117193 Dd1591_3761 Dickeya zeae Ech1591 tonB-system energizer ExbB YP_003006040.1 4253910 R 561229 CDS YP_003006041.1 251791320 8117194 4255140..4256333 1 NC_012912.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 4256333 8117194 Dd1591_3762 Dickeya zeae Ech1591 cystathionine beta-lyase YP_003006041.1 4255140 D 561229 CDS YP_003006042.1 251791321 8117195 4256588..4257247 1 NC_012912.1 PFAM: SNARE associated Golgi protein; KEGG: eca:ECA0353 DedA family membrane protein; hypothetical protein 4257247 8117195 Dd1591_3763 Dickeya zeae Ech1591 hypothetical protein YP_003006042.1 4256588 D 561229 CDS YP_003006043.1 251791322 8117196 complement(4257364..4258278) 1 NC_012912.1 PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spe:Spro_4214 AraC family transcriptional regulator; AraC family transcriptional regulator 4258278 8117196 Dd1591_3764 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003006043.1 4257364 R 561229 CDS YP_003006044.1 251791323 8117197 4258512..4259675 1 NC_012912.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: spe:Spro_4215 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4259675 8117197 Dd1591_3765 Dickeya zeae Ech1591 iron-containing alcohol dehydrogenase YP_003006044.1 4258512 D 561229 CDS YP_003006045.1 251791324 8117198 4259934..4260779 1 NC_012912.1 methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A 4260779 dkgA 8117198 dkgA Dickeya zeae Ech1591 2,5-diketo-D-gluconate reductase A YP_003006045.1 4259934 D 561229 CDS YP_003006046.1 251791325 8117199 complement(4260827..4262239) 1 NC_012912.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: eca:ECA0347 repressor protein for FtsI; repressor protein for FtsI 4262239 8117199 Dd1591_3767 Dickeya zeae Ech1591 repressor protein for FtsI YP_003006046.1 4260827 R 561229 CDS YP_003006047.1 251791326 8117200 complement(4262327..4263064) 1 NC_012912.1 KEGG: eca:ECA0346 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 4263064 8117200 Dd1591_3768 Dickeya zeae Ech1591 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003006047.1 4262327 R 561229 CDS YP_003006048.1 251791327 8117201 complement(4263297..4265573) 1 NC_012912.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 4265573 8117201 Dd1591_3769 Dickeya zeae Ech1591 DNA topoisomerase IV subunit A YP_003006048.1 4263297 R 561229 CDS YP_003006049.1 251791328 8117202 4265843..4266424 1 NC_012912.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eca:ECA0337 putative modulator of drug activity B; NAD(P)H dehydrogenase (quinone) 4266424 8117202 Dd1591_3770 Dickeya zeae Ech1591 NAD(P)H dehydrogenase (quinone) YP_003006049.1 4265843 D 561229 CDS YP_003006050.1 251791329 8117203 complement(4266475..4267371) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0336 LysR family transcriptional regulator; LysR family transcriptional regulator 4267371 8117203 Dd1591_3771 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003006050.1 4266475 R 561229 CDS YP_003006051.1 251791330 8117204 complement(4267384..4269279) 1 NC_012912.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 4269279 8117204 Dd1591_3772 Dickeya zeae Ech1591 DNA topoisomerase IV subunit B YP_003006051.1 4267384 R 561229 CDS YP_003006052.1 251791331 8117205 complement(4269466..4270047) 1 NC_012912.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA 4270047 8117205 Dd1591_3773 Dickeya zeae Ech1591 esterase YqiA YP_003006052.1 4269466 R 561229 CDS YP_003006053.1 251791332 8117206 complement(4270047..4270874) 1 NC_012912.1 PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: eca:ECA0333 cyclic 3',5'-adenosine monophosphate phosphodiesterase; calcineurin phosphoesterase domain-containing protein 4270874 8117206 Dd1591_3774 Dickeya zeae Ech1591 calcineurin phosphoesterase domain-containing protein YP_003006053.1 4270047 R 561229 CDS YP_003006054.1 251791333 8117207 complement(4270988..4271410) 1 NC_012912.1 PFAM: protein of unknown function DUF1249; KEGG: spe:Spro_4266 hypothetical protein; hypothetical protein 4271410 8117207 Dd1591_3775 Dickeya zeae Ech1591 hypothetical protein YP_003006054.1 4270988 R 561229 CDS YP_003006055.1 251791334 8117208 complement(4271410..4272045) 1 NC_012912.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF 4272045 nudF 8117208 nudF Dickeya zeae Ech1591 ADP-ribose pyrophosphatase NudF YP_003006055.1 4271410 R 561229 CDS YP_003006056.1 251791335 8117209 4272467..4273879 1 NC_012912.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 4273879 tolC 8117209 tolC Dickeya zeae Ech1591 outer membrane channel protein YP_003006056.1 4272467 D 561229 CDS YP_003006057.1 251791336 8117210 4274069..4274833 1 NC_012912.1 PFAM: protein of unknown function DUF1190; KEGG: eca:ECA0329 hypothetical protein; hypothetical protein 4274833 8117210 Dd1591_3778 Dickeya zeae Ech1591 hypothetical protein YP_003006057.1 4274069 D 561229 CDS YP_003006058.1 251791337 8117211 4274845..4276005 1 NC_012912.1 PFAM: glutathionylspermidine synthase; KEGG: eca:ECA0328 putative glutathionylspermidine synthase; glutathionylspermidine synthase 4276005 8117211 Dd1591_3779 Dickeya zeae Ech1591 glutathionylspermidine synthase YP_003006058.1 4274845 D 561229 CDS YP_003006059.1 251791338 8117212 complement(4276075..4276863) 1 NC_012912.1 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein 4276863 8117212 Dd1591_3780 Dickeya zeae Ech1591 hypothetical protein YP_003006059.1 4276075 R 561229 CDS YP_003006060.1 251791339 8117214 complement(4277443..4278330) 1 NC_012912.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA0323 putative tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole methyltransferase 4278330 8117214 Dd1591_3781 Dickeya zeae Ech1591 uroporphyrin-III C/tetrapyrrole methyltransferase YP_003006060.1 4277443 R 561229 CDS YP_003006061.1 251791340 8117215 4278390..4280438 1 NC_012912.1 PFAM: LppC family lipoprotein; KEGG: eca:ECA0322 hypothetical protein; LppC family lipoprotein 4280438 8117215 Dd1591_3782 Dickeya zeae Ech1591 LppC family lipoprotein YP_003006061.1 4278390 D 561229 CDS YP_003006062.1 251791341 8117216 4280435..4280791 1 NC_012912.1 PFAM: protein of unknown function UPF0102; KEGG: ypi:YpsIP31758_0474 hypothetical protein; hypothetical protein 4280791 8117216 Dd1591_3783 Dickeya zeae Ech1591 hypothetical protein YP_003006062.1 4280435 D 561229 CDS YP_003006063.1 251791342 8117217 4280829..4281419 1 NC_012912.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA 4281419 8117217 Dd1591_3784 Dickeya zeae Ech1591 DnaA initiator-associating protein DiaA YP_003006063.1 4280829 D 561229 CDS YP_003006064.1 251791343 8117218 4281430..4282005 1 NC_012912.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: eca:ECA0319 hypothetical protein; hypothetical protein 4282005 8117218 Dd1591_3785 Dickeya zeae Ech1591 hypothetical protein YP_003006064.1 4281430 D 561229 CDS YP_003006065.1 251791344 8117219 complement(4282138..4283442) 1 NC_012912.1 KEGG: eca:ECA0318 hypothetical protein; hypothetical protein 4283442 8117219 Dd1591_3786 Dickeya zeae Ech1591 hypothetical protein YP_003006065.1 4282138 R 561229 CDS YP_003006066.1 251791345 8117220 complement(4283537..4284286) 1 NC_012912.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 4284286 mtgA 8117220 mtgA Dickeya zeae Ech1591 monofunctional biosynthetic peptidoglycan transglycosylase YP_003006066.1 4283537 R 561229 CDS YP_003006067.1 251791346 8117221 complement(4284283..4284936) 1 NC_012912.1 PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA0316 isoprenoid biosynthesis protein; isoprenoid biosynthesis protein with amidotransferase-like domain 4284936 8117221 Dd1591_3788 Dickeya zeae Ech1591 isoprenoid biosynthesis protein with amidotransferase-like domain YP_003006067.1 4284283 R 561229 CDS YP_003006068.1 251791347 8117222 complement(4285173..4287512) 1 NC_012912.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 4287512 8117222 Dd1591_3789 Dickeya zeae Ech1591 aerobic respiration control sensor protein ArcB YP_003006068.1 4285173 R 561229 CDS YP_003006069.1 251791348 8117223 complement(4287606..4288550) 1 NC_012912.1 KEGG: eca:ECA0313 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 4288550 8117223 Dd1591_3790 Dickeya zeae Ech1591 hypothetical protein YP_003006069.1 4287606 R 561229 CDS YP_003006070.1 251791349 8117224 4289251..4293711 1 NC_012912.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 4293711 gltB 8117224 gltB Dickeya zeae Ech1591 glutamate synthase subunit alpha YP_003006070.1 4289251 D 561229 CDS YP_003006071.1 251791350 8117225 4293721..4295139 1 NC_012912.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 4295139 gltD 8117225 gltD Dickeya zeae Ech1591 glutamate synthase subunit beta YP_003006071.1 4293721 D 561229 CDS YP_003006072.1 251791351 8117226 complement(4295410..4296603) 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: sfx:S4808 hypothetical protein; transposase IS4 family protein 4296603 8117226 Dd1591_3793 Dickeya zeae Ech1591 transposase IS4 family protein YP_003006072.1 4295410 R 561229 CDS YP_003006073.1 251791352 8117227 complement(4297297..4297800) 1 NC_012912.1 PFAM: Stringent starvation protein B; KEGG: efe:EFER_3198 ClpXP protease specificity-enhancing factor; Stringent starvation protein B 4297800 8117227 Dd1591_3794 Dickeya zeae Ech1591 Stringent starvation protein B YP_003006073.1 4297297 R 561229 CDS YP_003006074.1 251791353 8117228 complement(4297805..4298446) 1 NC_012912.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 4298446 sspA 8117228 sspA Dickeya zeae Ech1591 stringent starvation protein A YP_003006074.1 4297805 R 561229 CDS YP_003006075.1 251791354 8117229 complement(4298772..4299164) 1 NC_012912.1 PFAM: ribosomal protein S9; KEGG: eca:ECA0307 30S ribosomal protein S9; 30S ribosomal protein S9 4299164 8117229 Dd1591_3796 Dickeya zeae Ech1591 30S ribosomal protein S9 YP_003006075.1 4298772 R 561229 CDS YP_003006076.1 251791355 8117230 complement(4299180..4299608) 1 NC_012912.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 4299608 rplM 8117230 rplM Dickeya zeae Ech1591 50S ribosomal protein L13 YP_003006076.1 4299180 R 561229 CDS YP_003006077.1 251791356 8117231 complement(4299873..4301003) 1 NC_012912.1 PFAM: AFG1-family ATPase; KEGG: eca:ECA0305 putative ATP/GTP-binding protein; AFG1-family ATPase 4301003 8117231 Dd1591_3798 Dickeya zeae Ech1591 AFG1-family ATPase YP_003006077.1 4299873 R 561229 CDS YP_003006078.1 251791357 8117232 4301216..4301620 1 NC_012912.1 PFAM: protein of unknown function DUF1043; KEGG: eca:ECA0304 cytochrome d ubiquinol oxidase subunit III; cytochrome d ubiquinol oxidase subunit III 4301620 8117232 Dd1591_3799 Dickeya zeae Ech1591 cytochrome d ubiquinol oxidase subunit III YP_003006078.1 4301216 D 561229 CDS YP_003006079.1 251791358 8117233 4301855..4303225 1 NC_012912.1 KEGG: eca:ECA0303 exported protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do 4303225 8117233 Dd1591_3800 Dickeya zeae Ech1591 protease Do YP_003006079.1 4301855 D 561229 CDS YP_003006080.1 251791359 8117234 4303312..4304376 1 NC_012912.1 KEGG: sgl:SG0212 serine endoprotease; TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; serine endoprotease 4304376 8117234 Dd1591_3801 Dickeya zeae Ech1591 serine endoprotease YP_003006080.1 4303312 D 561229 CDS YP_003006081.1 251791360 8117235 complement(4304432..4305694) 1 NC_012912.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4305694 8117235 Dd1591_3802 Dickeya zeae Ech1591 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003006081.1 4304432 R 561229 CDS YP_003006082.1 251791361 8117236 complement(4305748..4306002) 1 NC_012912.1 PFAM: BolA family protein; KEGG: spe:Spro_4355 BolA family protein; BolA family protein 4306002 8117236 Dd1591_3803 Dickeya zeae Ech1591 BolA family protein YP_003006082.1 4305748 R 561229 CDS YP_003006083.1 251791362 8117237 complement(4306145..4306438) 1 NC_012912.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: yen:YE3748 putative anti-sigma B factor antagonist; anti-sigma-factor antagonist 4306438 8117237 Dd1591_3804 Dickeya zeae Ech1591 anti-sigma-factor antagonist YP_003006083.1 4306145 R 561229 CDS YP_003006084.1 251791363 8117238 complement(4306431..4307084) 1 NC_012912.1 PFAM: toluene tolerance family protein; KEGG: spe:Spro_4357 toluene tolerance family protein; toluene tolerance family protein 4307084 8117238 Dd1591_3805 Dickeya zeae Ech1591 toluene tolerance family protein YP_003006084.1 4306431 R 561229 CDS YP_003006085.1 251791364 8117239 complement(4307096..4307740) 1 NC_012912.1 PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA0297 hypothetical protein; mammalian cell entry related domain-containing protein 4307740 8117239 Dd1591_3806 Dickeya zeae Ech1591 mammalian cell entry related domain-containing protein YP_003006085.1 4307096 R 561229 CDS YP_003006086.1 251791365 8117240 complement(4307745..4308527) 1 NC_012912.1 PFAM: protein of unknown function DUF140; KEGG: yen:YE3751 hypothetical protein; hypothetical protein 4308527 8117240 Dd1591_3807 Dickeya zeae Ech1591 hypothetical protein YP_003006086.1 4307745 R 561229 CDS YP_003006087.1 251791366 8117241 complement(4308531..4309340) 1 NC_012912.1 ATP-binding subunit of a putative ABC toluene efflux transporter; putative ABC transporter ATP-binding protein YrbF 4309340 8117241 Dd1591_3808 Dickeya zeae Ech1591 putative ABC transporter ATP-binding protein YrbF YP_003006087.1 4308531 R 561229 CDS YP_003006088.1 251791367 8117242 4309619..4310581 1 NC_012912.1 YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; putative calcium/sodium:proton antiporter 4310581 8117242 Dd1591_3809 Dickeya zeae Ech1591 putative calcium/sodium:proton antiporter YP_003006088.1 4309619 D 561229 CDS YP_003006089.1 251791368 8117243 4310612..4311598 1 NC_012912.1 KEGG: eca:ECA0293 D-arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; D-arabinose 5-phosphate isomerase 4311598 8117243 Dd1591_3810 Dickeya zeae Ech1591 D-arabinose 5-phosphate isomerase YP_003006089.1 4310612 D 561229 CDS YP_003006090.1 251791369 8117244 4311646..4312212 1 NC_012912.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4312212 8117244 Dd1591_3811 Dickeya zeae Ech1591 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_003006090.1 4311646 D 561229 CDS YP_003006091.1 251791370 8117245 4312209..4312778 1 NC_012912.1 PFAM: protein of unknown function DUF1239; KEGG: spe:Spro_4364 hypothetical protein; hypothetical protein 4312778 8117245 Dd1591_3812 Dickeya zeae Ech1591 hypothetical protein YP_003006091.1 4312209 D 561229 CDS YP_003006092.1 251791371 8117246 4312756..4313325 1 NC_012912.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: efe:EFER_3177 putative lipopolysaccharide transport protein A: periplasmic-binding component of ABC superfamily; lipopolysaccharide transport periplasmic protein LptA 4313325 8117246 Dd1591_3813 Dickeya zeae Ech1591 lipopolysaccharide transport periplasmic protein LptA YP_003006092.1 4312756 D 561229 CDS YP_003006093.1 251791372 8117247 4313341..4314066 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0289 putative ABC transporter ATP-binding protein YhbG; putative ABC transporter ATP-binding protein YhbG 4314066 8117247 Dd1591_3814 Dickeya zeae Ech1591 putative ABC transporter ATP-binding protein YhbG YP_003006093.1 4313341 D 561229 CDS YP_003006094.1 251791373 8117248 4314115..4315548 1 NC_012912.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 4315548 8117248 Dd1591_3815 Dickeya zeae Ech1591 RNA polymerase factor sigma-54 YP_003006094.1 4314115 D 561229 CDS YP_003006095.1 251791374 8117249 4315573..4315860 1 NC_012912.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: yen:YE3760 putative sigma(54) modulation protein; sigma 54 modulation protein/ribosomal protein S30EA 4315860 8117249 Dd1591_3816 Dickeya zeae Ech1591 sigma 54 modulation protein/ribosomal protein S30EA YP_003006095.1 4315573 D 561229 CDS YP_003006096.1 251791375 8117250 4315950..4316438 1 NC_012912.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: eca:ECA0286 sugar-specific enzyme IIA component of PTS; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 4316438 8117250 Dd1591_3817 Dickeya zeae Ech1591 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_003006096.1 4315950 D 561229 CDS YP_003006097.1 251791376 8117251 4316630..4317484 1 NC_012912.1 PFAM: conserved hypothetical protein; KEGG: eta:ETA_03120 conserved hypothetical protein YhbJ; hypothetical protein 4317484 8117251 Dd1591_3818 Dickeya zeae Ech1591 hypothetical protein YP_003006097.1 4316630 D 561229 CDS YP_003006098.1 251791377 8117252 4317481..4317753 1 NC_012912.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: eca:ECA0284 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 4317753 8117252 Dd1591_3819 Dickeya zeae Ech1591 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) YP_003006098.1 4317481 D 561229 CDS YP_003006099.1 251791378 8117253 4317932..4318342 1 NC_012912.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 4318342 8117253 Dd1591_3820 Dickeya zeae Ech1591 nucleoside diphosphate kinase regulator YP_003006099.1 4317932 D 561229 CDS YP_003006100.1 251791379 8117254 complement(4318417..4319757) 1 NC_012912.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase pmbA 4319757 8117254 Dd1591_3821 Dickeya zeae Ech1591 peptidase pmbA YP_003006100.1 4318417 R 561229 CDS YP_003006101.1 251791380 8117255 4319948..4320496 1 NC_012912.1 PFAM: protein of unknown function DUF615; KEGG: eca:ECA0281 hypothetical protein; hypothetical protein 4320496 8117255 Dd1591_3822 Dickeya zeae Ech1591 hypothetical protein YP_003006101.1 4319948 D 561229 CDS YP_003006102.1 251791381 8117256 4320496..4320594 1 NC_012912.1 hypothetical protein 4320594 8117256 Dd1591_3823 Dickeya zeae Ech1591 hypothetical protein YP_003006102.1 4320496 D 561229 CDS YP_003006103.1 251791382 8117257 4320591..4321091 1 NC_012912.1 PFAM: protein of unknown function DUF1543; KEGG: sgl:SG0708 hypothetical protein; hypothetical protein 4321091 8117257 Dd1591_3824 Dickeya zeae Ech1591 hypothetical protein YP_003006103.1 4320591 D 561229 CDS YP_003006104.1 251791383 8117258 complement(4321098..4323047) 1 NC_012912.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB 4323047 8117258 Dd1591_3825 Dickeya zeae Ech1591 p-hydroxybenzoic acid efflux subunit AaeB YP_003006104.1 4321098 R 561229 CDS YP_003006105.1 251791384 8117259 complement(4323061..4324008) 1 NC_012912.1 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA 4324008 8117259 Dd1591_3826 Dickeya zeae Ech1591 p-hydroxybenzoic acid efflux subunit AaeA YP_003006105.1 4323061 R 561229 CDS YP_003006106.1 251791385 8117260 complement(4324016..4324219) 1 NC_012912.1 membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein 4324219 8117260 Dd1591_3827 Dickeya zeae Ech1591 hypothetical protein YP_003006106.1 4324016 R 561229 CDS YP_003006107.1 251791386 8117261 4324555..4325499 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0276 putative DNA-binding transcriptional regulator; putative DNA-binding transcriptional regulator 4325499 8117261 Dd1591_3828 Dickeya zeae Ech1591 putative DNA-binding transcriptional regulator YP_003006107.1 4324555 D 561229 CDS YP_003006108.1 251791387 8117262 complement(4325545..4326990) 1 NC_012912.1 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD 4326990 tldD 8117262 tldD Dickeya zeae Ech1591 protease TldD YP_003006108.1 4325545 R 561229 CDS YP_003006109.1 251791388 8117263 complement(4327037..4330891) 1 NC_012912.1 KEGG: eca:ECA0272 hypothetical protein; hypothetical protein 4330891 8117263 Dd1591_3830 Dickeya zeae Ech1591 hypothetical protein YP_003006109.1 4327037 R 561229 CDS YP_003006110.1 251791389 8117264 complement(4330983..4332452) 1 NC_012912.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 4332452 8117264 Dd1591_3831 Dickeya zeae Ech1591 ribonuclease G YP_003006110.1 4330983 R 561229 CDS YP_003006111.1 251791390 8117265 complement(4332442..4333035) 1 NC_012912.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ypi:YpsIP31758_0401 Maf-like protein; maf protein 4333035 8117265 Dd1591_3832 Dickeya zeae Ech1591 maf protein YP_003006111.1 4332442 R 561229 CDS YP_003006112.1 251791391 8117266 complement(4333060..4333548) 1 NC_012912.1 part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD 4333548 8117266 Dd1591_3833 Dickeya zeae Ech1591 rod shape-determining protein MreD YP_003006112.1 4333060 R 561229 CDS YP_003006113.1 251791392 8118787 complement(4333545..4334696) 1 NC_012912.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 4334696 8118787 Dd1591_3834 Dickeya zeae Ech1591 rod shape-determining protein MreC YP_003006113.1 4333545 R 561229 CDS YP_003006114.1 251791393 8118788 complement(4334798..4335841) 1 NC_012912.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 4335841 8118788 Dd1591_3835 Dickeya zeae Ech1591 rod shape-determining protein MreB YP_003006114.1 4334798 R 561229 CDS YP_003006115.1 251791394 8118789 complement(4336156..4338102) 1 NC_012912.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 4338102 8118789 Dd1591_3836 Dickeya zeae Ech1591 regulatory protein CsrD YP_003006115.1 4336156 R 561229 CDS YP_003006116.1 251791395 8118790 4338255..4339241 1 NC_012912.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA0265 putative zinc-binding oxidoreductase; quinone oxidoreductase, YhdH/YhfP family 4339241 8118790 Dd1591_3837 Dickeya zeae Ech1591 quinone oxidoreductase, YhdH/YhfP family YP_003006116.1 4338255 D 561229 CDS YP_003006117.1 251791396 8118791 4339427..4340428 1 NC_012912.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 4340428 8118791 Dd1591_3838 Dickeya zeae Ech1591 putative sulfite oxidase subunit YedY YP_003006117.1 4339427 D 561229 CDS YP_003006118.1 251791397 8118792 4340511..4341110 1 NC_012912.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 4341110 8118792 Dd1591_3839 Dickeya zeae Ech1591 putative sulfite oxidase subunit YedZ YP_003006118.1 4340511 D 561229 CDS YP_003006119.1 251791398 8118793 4341350..4341802 1 NC_012912.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4341802 8118793 Dd1591_3840 Dickeya zeae Ech1591 3-dehydroquinate dehydratase YP_003006119.1 4341350 D 561229 CDS YP_003006120.1 251791399 8118794 4341838..4342305 1 NC_012912.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: eca:ECA0261 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4342305 8118794 Dd1591_3841 Dickeya zeae Ech1591 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_003006120.1 4341838 D 561229 CDS YP_003006121.1 251791400 8118795 4342317..4343660 1 NC_012912.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: eca:ECA0260 acetyl-CoA carboxylase biotin carboxylase subunit; acetyl-CoA carboxylase, biotin carboxylase 4343660 8118795 Dd1591_3842 Dickeya zeae Ech1591 acetyl-CoA carboxylase, biotin carboxylase YP_003006121.1 4342317 D 561229 CDS YP_003006122.1 251791401 8118796 4343855..4344097 1 NC_012912.1 PFAM: protein of unknown function DUF997; KEGG: esa:ESA_03646 hypothetical protein; hypothetical protein 4344097 8118796 Dd1591_3843 Dickeya zeae Ech1591 hypothetical protein YP_003006122.1 4343855 D 561229 CDS YP_003006123.1 251791402 8118797 4344087..4345538 1 NC_012912.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 4345538 panF 8118797 panF Dickeya zeae Ech1591 sodium/panthothenate symporter YP_003006123.1 4344087 D 561229 CDS YP_003006124.1 251791403 8118798 4345553..4346440 1 NC_012912.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 4346440 prmA 8118798 prmA Dickeya zeae Ech1591 ribosomal protein L11 methyltransferase YP_003006124.1 4345553 D 561229 CDS YP_003006125.1 251791404 8118799 4346772..4347737 1 NC_012912.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: eca:ECA0256 tRNA-dihydrouridine synthase B; tRNA-dihydrouridine synthase B 4347737 8118799 Dd1591_3846 Dickeya zeae Ech1591 tRNA-dihydrouridine synthase B YP_003006125.1 4346772 D 561229 CDS YP_003006126.1 251791405 8118800 4347761..4348057 1 NC_012912.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 4348057 fis 8118800 fis Dickeya zeae Ech1591 DNA-binding protein Fis YP_003006126.1 4347761 D 561229 CDS YP_003006127.1 251791406 8118801 complement(4348225..4349277) 1 NC_012912.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: yen:YE3722 NADP-dependent alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 4349277 8118801 Dd1591_3848 Dickeya zeae Ech1591 alcohol dehydrogenase GroES domain-containing protein YP_003006127.1 4348225 R 561229 CDS YP_003006128.1 251791407 8118802 complement(4349293..4349541) 1 NC_012912.1 KEGG: ade:Adeh_3217 short-chain dehydrogenase/reductase SDR; hypothetical protein 4349541 8118802 Dd1591_3849 Dickeya zeae Ech1591 hypothetical protein YP_003006128.1 4349293 R 561229 CDS YP_003006129.1 251791408 8118803 complement(4349541..4349936) 1 NC_012912.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: spe:Spro_3098 cupin 2 domain-containing protein; Cupin 2 barrel domain-containing protein 4349936 8118803 Dd1591_3850 Dickeya zeae Ech1591 Cupin 2 barrel domain-containing protein YP_003006129.1 4349541 R 561229 CDS YP_003006130.1 251791409 8118804 4350213..4351106 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3134 LysR family transcriptional regulator; LysR family transcriptional regulator 4351106 8118804 Dd1591_3851 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003006130.1 4350213 D 561229 CDS YP_003006131.1 251791410 8118805 complement(4351107..4352330) 1 NC_012912.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ara:Arad_7425 drug transporter protein; Bcr/CflA subfamily drug resistance transporter 4352330 8118805 Dd1591_3852 Dickeya zeae Ech1591 Bcr/CflA subfamily drug resistance transporter YP_003006131.1 4351107 R 561229 CDS YP_003006132.1 251791411 8118806 complement(4352330..4352434) 1 NC_012912.1 hypothetical protein 4352434 8118806 Dd1591_3853 Dickeya zeae Ech1591 hypothetical protein YP_003006132.1 4352330 R 561229 CDS YP_003006133.1 251791412 8118807 complement(4352635..4353777) 1 NC_012912.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: eca:ECA0251 endonuclease/exonuclease/phosphatase family protein; Endonuclease/exonuclease/phosphatase 4353777 8118807 Dd1591_3854 Dickeya zeae Ech1591 Endonuclease/exonuclease/phosphatase YP_003006133.1 4352635 R 561229 CDS YP_003006134.1 251791413 8118808 4354028..4354798 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0247 putative cystine-binding periplasmic protein; extracellular solute-binding protein family 3 4354798 8118808 Dd1591_3855 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003006134.1 4354028 D 561229 CDS YP_003006135.1 251791414 8118809 4354826..4355491 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0246 putative amino-acid transport system permease protein; polar amino acid ABC transporter permease 4355491 8118809 Dd1591_3856 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003006135.1 4354826 D 561229 CDS YP_003006136.1 251791415 8118810 4356014..4357045 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0245 general L-amino ABC transporter binding protein; extracellular solute-binding protein family 3 4357045 8118810 Dd1591_3857 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003006136.1 4356014 D 561229 CDS YP_003006137.1 251791416 8118811 4357118..4358296 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0244 L-amino acid ABC transporter permease protein; polar amino acid ABC transporter permease 4358296 8118811 Dd1591_3858 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003006137.1 4357118 D 561229 CDS YP_003006138.1 251791417 8118812 4358306..4359400 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0243 L-amino acid ABC transporter permease protein; polar amino acid ABC transporter permease 4359400 8118812 Dd1591_3859 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003006138.1 4358306 D 561229 CDS YP_003006139.1 251791418 8118813 4359409..4360170 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0242 L-amino acid ABC transporter ATP-binding protein; ABC transporter 4360170 8118813 Dd1591_3860 Dickeya zeae Ech1591 ABC transporter YP_003006139.1 4359409 D 561229 CDS YP_003006140.1 251791419 8118818 4366117..4367706 1 NC_012912.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4367706 purH 8118818 purH Dickeya zeae Ech1591 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_003006140.1 4366117 D 561229 CDS YP_003006141.1 251791420 8118819 4367722..4369011 1 NC_012912.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 4369011 8118819 Dd1591_3862 Dickeya zeae Ech1591 phosphoribosylamine--glycine ligase YP_003006141.1 4367722 D 561229 CDS YP_003006142.1 251791421 8118820 complement(4369100..4369810) 1 NC_012912.1 PFAM: protein of unknown function DUF1481; KEGG: eca:ECA0239 putative lipoprotein; hypothetical protein 4369810 8118820 Dd1591_3863 Dickeya zeae Ech1591 hypothetical protein YP_003006142.1 4369100 R 561229 CDS YP_003006143.1 251791422 8118821 complement(4369815..4370087) 1 NC_012912.1 histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 4370087 8118821 Dd1591_3864 Dickeya zeae Ech1591 transcriptional regulator HU subunit alpha YP_003006143.1 4369815 R 561229 CDS YP_003006144.1 251791423 8118822 complement(4370275..4370865) 1 NC_012912.1 PFAM: protein of unknown function DUF416; KEGG: eca:ECA0237 putative lipoprotein; hypothetical protein 4370865 8118822 Dd1591_3865 Dickeya zeae Ech1591 hypothetical protein YP_003006144.1 4370275 R 561229 CDS YP_003006145.1 251791424 8118823 complement(4370957..4371631) 1 NC_012912.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V 4371631 8118823 Dd1591_3866 Dickeya zeae Ech1591 endonuclease V YP_003006145.1 4370957 R 561229 CDS YP_003006146.1 251791425 8118824 complement(4371631..4372704) 1 NC_012912.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 4372704 hemE 8118824 hemE Dickeya zeae Ech1591 uroporphyrinogen decarboxylase YP_003006146.1 4371631 R 561229 CDS YP_003006147.1 251791426 8118825 complement(4372760..4373533) 1 NC_012912.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 4373533 nudC 8118825 nudC Dickeya zeae Ech1591 NADH pyrophosphatase YP_003006147.1 4372760 R 561229 CDS YP_003006148.1 251791427 8118826 4373686..4374135 1 NC_012912.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 4374135 8118826 Dd1591_3869 Dickeya zeae Ech1591 anti-RNA polymerase sigma 70 factor YP_003006148.1 4373686 D 561229 CDS YP_003006149.1 251791428 8118827 4374449..4376416 1 NC_012912.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4376416 8118827 Dd1591_3870 Dickeya zeae Ech1591 thiamine biosynthesis protein ThiC YP_003006149.1 4374449 D 561229 CDS YP_003006150.1 251791429 8118828 4376416..4377051 1 NC_012912.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 4377051 8118828 Dd1591_3871 Dickeya zeae Ech1591 thiamine-phosphate pyrophosphorylase YP_003006150.1 4376416 D 561229 CDS YP_003006151.1 251791430 8118829 4377053..4377802 1 NC_012912.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: spe:Spro_0282 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 4377802 8118829 Dd1591_3872 Dickeya zeae Ech1591 UBA/THIF-type NAD/FAD binding protein YP_003006151.1 4377053 D 561229 CDS YP_003006152.1 251791431 8118830 4377799..4377999 1 NC_012912.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: eca:ECA0229A sulfur carrier protein ThiS; thiamine biosynthesis protein ThiS 4377999 8118830 Dd1591_3873 Dickeya zeae Ech1591 thiamine biosynthesis protein ThiS YP_003006152.1 4377799 D 561229 CDS YP_003006153.1 251791432 8118831 4378001..4378780 1 NC_012912.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 4378780 thiG 8118831 thiG Dickeya zeae Ech1591 thiazole synthase YP_003006153.1 4378001 D 561229 CDS YP_003006154.1 251791433 8118832 4378780..4379925 1 NC_012912.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 4379925 thiH 8118832 thiH Dickeya zeae Ech1591 thiamine biosynthesis protein ThiH YP_003006154.1 4378780 D 561229 CDS YP_003006155.1 251791434 8118833 complement(4380068..4381498) 1 NC_012912.1 PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eta:ETA_01690 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 4381498 8118833 Dd1591_3876 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003006155.1 4380068 R 561229 CDS YP_003006156.1 251791435 8118834 complement(4381495..4381638) 1 NC_012912.1 hypothetical protein 4381638 8118834 Dd1591_3877 Dickeya zeae Ech1591 hypothetical protein YP_003006156.1 4381495 R 561229 CDS YP_003006157.1 251791436 8118835 4381663..4381854 1 NC_012912.1 PFAM: protein of unknown function DUF1127; KEGG: ecl:EcolC_3722 hypothetical protein; hypothetical protein 4381854 8118835 Dd1591_3878 Dickeya zeae Ech1591 hypothetical protein YP_003006157.1 4381663 D 561229 CDS YP_003006158.1 251791437 8118836 4382114..4382296 1 NC_012912.1 PFAM: protein of unknown function DUF1127; KEGG: ecr:ECIAI1_4560 hypothetical protein; hypothetical protein 4382296 8118836 Dd1591_3879 Dickeya zeae Ech1591 hypothetical protein YP_003006158.1 4382114 D 561229 CDS YP_003006159.1 251791438 8118837 complement(4382374..4382496) 1 NC_012912.1 hypothetical protein 4382496 8118837 Dd1591_3880 Dickeya zeae Ech1591 hypothetical protein YP_003006159.1 4382374 R 561229 CDS YP_003006160.1 251791439 8118838 complement(4382564..4383670) 1 NC_012912.1 PFAM: protein of unknown function DUF1176; KEGG: bur:Bcep18194_B2472 hypothetical protein; hypothetical protein 4383670 8118838 Dd1591_3881 Dickeya zeae Ech1591 hypothetical protein YP_003006160.1 4382564 R 561229 CDS YP_003006161.1 251791440 8118839 complement(4383799..4384896) 1 NC_012912.1 PFAM: protein of unknown function DUF1176; KEGG: ent:Ent638_2961 hypothetical protein; hypothetical protein 4384896 8118839 Dd1591_3882 Dickeya zeae Ech1591 hypothetical protein YP_003006161.1 4383799 R 561229 CDS YP_003006162.1 251791441 8118840 complement(4384940..4385197) 1 NC_012912.1 hypothetical protein 4385197 8118840 Dd1591_3883 Dickeya zeae Ech1591 hypothetical protein YP_003006162.1 4384940 R 561229 CDS YP_003006163.1 251791442 8118841 complement(4385819..4390042) 1 NC_012912.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4390042 8118841 Dd1591_3884 Dickeya zeae Ech1591 DNA-directed RNA polymerase subunit beta' YP_003006163.1 4385819 R 561229 CDS YP_003006164.1 251791443 8118842 complement(4390147..4394175) 1 NC_012912.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4394175 rpoB 8118842 rpoB Dickeya zeae Ech1591 DNA-directed RNA polymerase subunit beta YP_003006164.1 4390147 R 561229 CDS YP_003006165.1 251791444 8118843 complement(4394500..4394865) 1 NC_012912.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: ent:Ent638_0196 50S ribosomal protein L7/L12; 50S ribosomal protein L7/L12 4394865 8118843 Dd1591_3886 Dickeya zeae Ech1591 50S ribosomal protein L7/L12 YP_003006165.1 4394500 R 561229 CDS YP_003006166.1 251791445 8118844 complement(4394932..4395429) 1 NC_012912.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4395429 rplJ 8118844 rplJ Dickeya zeae Ech1591 50S ribosomal protein L10 YP_003006166.1 4394932 R 561229 CDS YP_003006167.1 251791446 8118845 complement(4395766..4396470) 1 NC_012912.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: kpn:KPN_04361 50S ribosomal protein L1; 50S ribosomal protein L1 4396470 8118845 Dd1591_3888 Dickeya zeae Ech1591 50S ribosomal protein L1 YP_003006167.1 4395766 R 561229 CDS YP_003006168.1 251791447 8118846 complement(4396474..4396902) 1 NC_012912.1 KEGG: kpe:KPK_5313 ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 4396902 8118846 Dd1591_3889 Dickeya zeae Ech1591 50S ribosomal protein L11 YP_003006168.1 4396474 R 561229 CDS YP_003006169.1 251791448 8118847 complement(4397050..4397595) 1 NC_012912.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 4397595 nusG 8118847 nusG Dickeya zeae Ech1591 transcription antitermination protein NusG YP_003006169.1 4397050 R 561229 CDS YP_003006170.1 251791449 8118848 complement(4397597..4397980) 1 NC_012912.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 4397980 secE 8118848 secE Dickeya zeae Ech1591 preprotein translocase subunit SecE YP_003006170.1 4397597 R 561229 CDS YP_003006171.1 251791450 8118849 complement(4398216..4399400) 1 NC_012912.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4399400 8118849 Dd1591_3892 Dickeya zeae Ech1591 elongation factor Tu YP_003006171.1 4398216 R 561229 CDS YP_003006172.1 251791451 8118854 complement(4400259..4400417) 1 NC_012912.1 hypothetical protein 4400417 8118854 Dd1591_3893 Dickeya zeae Ech1591 hypothetical protein YP_003006172.1 4400259 R 561229 CDS YP_003006173.1 251791452 8118855 4400814..4401764 1 NC_012912.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 4401764 8118855 Dd1591_3894 Dickeya zeae Ech1591 pantothenate kinase YP_003006173.1 4400814 D 561229 CDS YP_003006174.1 251791453 8118856 complement(4401797..4402756) 1 NC_012912.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 4402756 8118856 Dd1591_3895 Dickeya zeae Ech1591 biotin--protein ligase YP_003006174.1 4401797 R 561229 CDS YP_003006175.1 251791454 8118857 complement(4402753..4403790) 1 NC_012912.1 KEGG: elf:LF82_1416 hypothetical protein; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 4403790 8118857 Dd1591_3896 Dickeya zeae Ech1591 UDP-N-acetylenolpyruvoylglucosamine reductase YP_003006175.1 4402753 R 561229 CDS YP_003006176.1 251791455 8118862 complement(4409451..4409990) 1 NC_012912.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 4409990 hemG 8118862 hemG Dickeya zeae Ech1591 protoporphyrinogen oxidase YP_003006176.1 4409451 R 561229 CDS YP_003006177.1 251791456 8118863 complement(4410012..4411463) 1 NC_012912.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: yen:YE0272 potassium transporter; potassium transporter 4411463 8118863 Dd1591_3898 Dickeya zeae Ech1591 potassium transporter YP_003006177.1 4410012 R 561229 CDS YP_003006178.1 251791457 8118864 complement(4411504..4412118) 1 NC_012912.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: eca:ECA0210 hypothetical protein; hypothetical protein 4412118 8118864 Dd1591_3899 Dickeya zeae Ech1591 hypothetical protein YP_003006178.1 4411504 R 561229 CDS YP_003006179.1 251791458 8118865 complement(4412118..4413449) 1 NC_012912.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 4413449 8118865 Dd1591_3900 Dickeya zeae Ech1591 proline dipeptidase YP_003006179.1 4412118 R 561229 CDS YP_003006180.1 251791459 8118866 4413631..4415820 1 NC_012912.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 4415820 fadB 8118866 fadB Dickeya zeae Ech1591 multifunctional fatty acid oxidation complex subunit alpha YP_003006180.1 4413631 D 561229 CDS YP_003006181.1 251791460 8117507 4415833..4416996 1 NC_012912.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 4416996 fadA 8117507 fadA Dickeya zeae Ech1591 3-ketoacyl-CoA thiolase YP_003006181.1 4415833 D 561229 CDS YP_003006182.1 251791461 8117508 complement(4417042..4417470) 1 NC_012912.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ppf:Pput_2447 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 4417470 8117508 Dd1591_3903 Dickeya zeae Ech1591 hypothetical protein YP_003006182.1 4417042 R 561229 CDS YP_003006183.1 251791462 8117509 complement(4417505..4417921) 1 NC_012912.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: spe:Spro_1878 protein of unknown function DUF395 YeeE/YedE; hypothetical protein 4417921 8117509 Dd1591_3904 Dickeya zeae Ech1591 hypothetical protein YP_003006183.1 4417505 R 561229 CDS YP_003006184.1 251791463 8117510 complement(4418366..4419067) 1 NC_012912.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 4419067 fre 8117510 fre Dickeya zeae Ech1591 FMN reductase YP_003006184.1 4418366 R 561229 CDS YP_003006185.1 251791464 8117511 complement(4419117..4420613) 1 NC_012912.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: eca:ECA0205 3-octaprenyl-4-hydroxybenzoate decarboxylase; UbiD family decarboxylase 4420613 8117511 Dd1591_3906 Dickeya zeae Ech1591 UbiD family decarboxylase YP_003006185.1 4419117 R 561229 CDS YP_003006186.1 251791465 8117512 4420814..4421302 1 NC_012912.1 KEGG: spe:Spro_0256 transcriptional activator RfaH; TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; SMART: NGN domain protein; transcriptional activator RfaH 4421302 rfaH 8117512 rfaH Dickeya zeae Ech1591 transcriptional activator RfaH YP_003006186.1 4420814 D 561229 CDS YP_003006187.1 251791466 8117513 complement(4421335..4422357) 1 NC_012912.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 4422357 8117513 Dd1591_3908 Dickeya zeae Ech1591 delta-aminolevulinic acid dehydratase YP_003006187.1 4421335 R 561229 CDS YP_003006188.1 251791467 8117514 complement(4422360..4423154) 1 NC_012912.1 magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 4423154 8117514 Dd1591_3909 Dickeya zeae Ech1591 DNase TatD YP_003006188.1 4422360 R 561229 CDS YP_003006189.1 251791468 8117515 complement(4423266..4424033) 1 NC_012912.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 4424033 8117515 Dd1591_3910 Dickeya zeae Ech1591 twin-arginine protein translocation system subunit TatC YP_003006189.1 4423266 R 561229 CDS YP_003006190.1 251791469 8117516 complement(4424037..4424609) 1 NC_012912.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: spe:Spro_0252 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein, TatB subunit 4424609 8117516 Dd1591_3911 Dickeya zeae Ech1591 twin-arginine translocation protein, TatB subunit YP_003006190.1 4424037 R 561229 CDS YP_003006191.1 251791470 8117517 complement(4424613..4424867) 1 NC_012912.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: eca:ECA0199 sec-independent protein translocase; twin-arginine translocation protein, TatA/E family subunit 4424867 8117517 Dd1591_3912 Dickeya zeae Ech1591 twin-arginine translocation protein, TatA/E family subunit YP_003006191.1 4424613 R 561229 CDS YP_003006192.1 251791471 8117518 complement(4424965..4426602) 1 NC_012912.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 4426602 ubiB 8117518 ubiB Dickeya zeae Ech1591 putative ubiquinone biosynthesis protein UbiB YP_003006192.1 4424965 R 561229 CDS YP_003006193.1 251791472 8117519 complement(4426599..4427207) 1 NC_012912.1 PFAM: Sterol-binding domain protein; KEGG: eca:ECA0197 hypothetical protein; Sterol-binding domain-containing protein 4427207 8117519 Dd1591_3914 Dickeya zeae Ech1591 Sterol-binding domain-containing protein YP_003006193.1 4426599 R 561229 CDS YP_003006194.1 251791473 8117520 complement(4427221..4427976) 1 NC_012912.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: eca:ECA0196 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 4427976 8117520 Dd1591_3915 Dickeya zeae Ech1591 ubiquinone/menaquinone biosynthesis methyltransferase YP_003006194.1 4427221 R 561229 CDS YP_003006195.1 251791474 8117521 complement(4428111..4429652) 1 NC_012912.1 PFAM: protein of unknown function DUF195; KEGG: eca:ECA0195 DNA recombination protein; hypothetical protein 4429652 8117521 Dd1591_3916 Dickeya zeae Ech1591 hypothetical protein YP_003006195.1 4428111 R 561229 CDS YP_003006196.1 251791475 8117522 complement(4429843..4431216) 1 NC_012912.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 4431216 8117522 Dd1591_3917 Dickeya zeae Ech1591 argininosuccinate lyase YP_003006196.1 4429843 R 561229 CDS YP_003006197.1 251791476 8117523 complement(4431334..4432107) 1 NC_012912.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 4432107 8117523 Dd1591_3918 Dickeya zeae Ech1591 acetylglutamate kinase YP_003006197.1 4431334 R 561229 CDS YP_003006198.1 251791477 8117524 complement(4432132..4433136) 1 NC_012912.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 4433136 argC 8117524 argC Dickeya zeae Ech1591 N-acetyl-gamma-glutamyl-phosphate reductase YP_003006198.1 4432132 R 561229 CDS YP_003006199.1 251791478 8117525 4433351..4434502 1 NC_012912.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 4434502 8117525 Dd1591_3920 Dickeya zeae Ech1591 acetylornithine deacetylase YP_003006199.1 4433351 D 561229 CDS YP_003006200.1 251791479 8117526 complement(4434572..4437136) 1 NC_012912.1 KEGG: eca:ECA2020 hypothetical protein; hypothetical protein 4437136 8117526 Dd1591_3921 Dickeya zeae Ech1591 hypothetical protein YP_003006200.1 4434572 R 561229 CDS YP_003006201.1 251791480 8117527 complement(4437152..4439554) 1 NC_012912.1 KEGG: eca:ECA2019 hypothetical protein; hypothetical protein 4439554 8117527 Dd1591_3922 Dickeya zeae Ech1591 hypothetical protein YP_003006201.1 4437152 R 561229 CDS YP_003006202.1 251791481 8117528 complement(4439687..4439830) 1 NC_012912.1 hypothetical protein 4439830 8117528 Dd1591_3923 Dickeya zeae Ech1591 hypothetical protein YP_003006202.1 4439687 R 561229 CDS YP_003006203.1 251791482 8117529 4439960..4440154 1 NC_012912.1 hypothetical protein 4440154 8117529 Dd1591_3924 Dickeya zeae Ech1591 hypothetical protein YP_003006203.1 4439960 D 561229 CDS YP_003006204.1 251791483 8117530 4440209..4441342 1 NC_012912.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: hypothetical protein; UBA/THIF-type NAD/FAD binding protein 4441342 8117530 Dd1591_3925 Dickeya zeae Ech1591 UBA/THIF-type NAD/FAD binding protein YP_003006204.1 4440209 D 561229 CDS YP_003006205.1 251791484 8117531 4441335..4442429 1 NC_012912.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: pmr:PMI2779 thiamine biosynthesis adenylyltransferase; UBA/THIF-type NAD/FAD binding protein 4442429 8117531 Dd1591_3926 Dickeya zeae Ech1591 UBA/THIF-type NAD/FAD binding protein YP_003006205.1 4441335 D 561229 CDS YP_003006206.1 251791485 8117532 4442410..4444545 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asu:Asuc_1634 ABC transporter related; ABC transporter 4444545 8117532 Dd1591_3927 Dickeya zeae Ech1591 ABC transporter YP_003006206.1 4442410 D 561229 CDS YP_003006207.1 251791486 8117533 4444841..4447480 1 NC_012912.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 4447480 8117533 Dd1591_3928 Dickeya zeae Ech1591 phosphoenolpyruvate carboxylase YP_003006207.1 4444841 D 561229 CDS YP_003006208.1 251791487 8117534 complement(4447698..4448270) 1 NC_012912.1 hypothetical protein 4448270 8117534 Dd1591_3929 Dickeya zeae Ech1591 hypothetical protein YP_003006208.1 4447698 R 561229 CDS YP_003006209.1 251791488 8117535 complement(4448277..4448801) 1 NC_012912.1 KEGG: vei:Veis_1323 hypothetical protein; hypothetical protein 4448801 8117535 Dd1591_3930 Dickeya zeae Ech1591 hypothetical protein YP_003006209.1 4448277 R 561229 CDS YP_003006210.1 251791489 8117536 complement(4449129..4449911) 1 NC_012912.1 KEGG: eca:ECA0186 hypothetical protein; protein tyrosine/serine phosphatase 4449911 8117536 Dd1591_3931 Dickeya zeae Ech1591 protein tyrosine/serine phosphatase YP_003006210.1 4449129 R 561229 CDS YP_003006211.1 251791490 8117537 complement(4450156..4450917) 1 NC_012912.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 4450917 8117537 Dd1591_3932 Dickeya zeae Ech1591 uridine phosphorylase YP_003006211.1 4450156 R 561229 CDS YP_003006212.1 251791491 8117538 4451242..4452069 1 NC_012912.1 PFAM: dienelactone hydrolase; KEGG: eca:ECA0184 putative carboxymethylenebutenolidase; carboxymethylenebutenolidase 4452069 8117538 Dd1591_3933 Dickeya zeae Ech1591 carboxymethylenebutenolidase YP_003006212.1 4451242 D 561229 CDS YP_003006213.1 251791492 8117539 complement(4452660..4454930) 1 NC_012912.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 4454930 8117539 Dd1591_3934 Dickeya zeae Ech1591 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_003006213.1 4452660 R 561229 CDS YP_003006214.1 251791493 8117540 4455035..4455973 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0180 transcriptional activator protein; LysR family transcriptional regulator 4455973 8117540 Dd1591_3935 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003006214.1 4455035 D 561229 CDS YP_003006215.1 251791494 8117541 complement(4455876..4456832) 1 NC_012912.1 TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA0179 hypothetical protein; carboxylate/amino acid/amine transporter 4456832 8117541 Dd1591_3936 Dickeya zeae Ech1591 carboxylate/amino acid/amine transporter YP_003006215.1 4455876 R 561229 CDS YP_003006216.1 251791495 8117542 complement(4456905..4457492) 1 NC_012912.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: eca:ECA0175 palmitoyl transferase for lipid A; antimicrobial peptide resistance and lipid a acylation PagP 4457492 8117542 Dd1591_3937 Dickeya zeae Ech1591 antimicrobial peptide resistance and lipid a acylation PagP YP_003006216.1 4456905 R 561229 CDS YP_003006217.1 251791496 8117543 complement(4457848..4458669) 1 NC_012912.1 catalyzes the O-acetylation of serine; serine acetyltransferase 4458669 cysE 8117543 cysE Dickeya zeae Ech1591 serine acetyltransferase YP_003006217.1 4457848 R 561229 CDS YP_003006218.1 251791497 8117544 complement(4459014..4460033) 1 NC_012912.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 4460033 gpsA 8117544 gpsA Dickeya zeae Ech1591 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_003006218.1 4459014 R 561229 CDS YP_003006219.1 251791498 8117545 complement(4460033..4460572) 1 NC_012912.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 4460572 8117545 Dd1591_3940 Dickeya zeae Ech1591 preprotein translocase subunit SecB YP_003006219.1 4460033 R 561229 CDS YP_003006220.1 251791499 8117546 complement(4460603..4461034) 1 NC_012912.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: eca:ECA0171 putative rhodanese-related sulfurtransferase; Rhodanese domain-containing protein 4461034 8117546 Dd1591_3941 Dickeya zeae Ech1591 Rhodanese domain-containing protein YP_003006220.1 4460603 R 561229 CDS YP_003006221.1 251791500 8117547 4461272..4462546 1 NC_012912.1 PFAM: Peptidase M23; KEGG: eca:ECA0170 hypothetical protein; hypothetical protein 4462546 8117547 Dd1591_3942 Dickeya zeae Ech1591 hypothetical protein YP_003006221.1 4461272 D 561229 CDS YP_003006222.1 251791501 8117548 4462549..4463478 1 NC_012912.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: eca:ECA0169 hypothetical protein; hypothetical protein 4463478 8117548 Dd1591_3943 Dickeya zeae Ech1591 hypothetical protein YP_003006222.1 4462549 D 561229 CDS YP_003006223.1 251791502 8117549 complement(4463515..4464543) 1 NC_012912.1 TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pmr:PMI3178 L-threonine 3-dehydrogenase; L-threonine 3-dehydrogenase 4464543 8117549 Dd1591_3944 Dickeya zeae Ech1591 L-threonine 3-dehydrogenase YP_003006223.1 4463515 R 561229 CDS YP_003006224.1 251791503 8117550 complement(4464551..4465747) 1 NC_012912.1 KEGG: eca:ECA0167 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; 2-amino-3-ketobutyrate coenzyme A ligase 4465747 8117550 Dd1591_3945 Dickeya zeae Ech1591 2-amino-3-ketobutyrate coenzyme A ligase YP_003006224.1 4464551 R 561229 CDS YP_003006225.1 251791504 8117551 4466027..4466959 1 NC_012912.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-mannoheptose-6-epimerase 4466959 rfaD 8117551 rfaD Dickeya zeae Ech1591 ADP-L-glycero-D-mannoheptose-6-epimerase YP_003006225.1 4466027 D 561229 CDS YP_003006226.1 251791505 8117552 4466990..4468042 1 NC_012912.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose:LPS heptosyltransferase II 4468042 8117552 Dd1591_3947 Dickeya zeae Ech1591 ADP-heptose:LPS heptosyltransferase II YP_003006226.1 4466990 D 561229 CDS YP_003006227.1 251791506 8117553 4468039..4469010 1 NC_012912.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: eca:ECA0163 ADP-heptose:LPS heptosyl transferase I; ADP-heptose:LPS heptosyl transferase I 4469010 8117553 Dd1591_3948 Dickeya zeae Ech1591 ADP-heptose:LPS heptosyl transferase I YP_003006227.1 4468039 D 561229 CDS YP_003006228.1 251791507 8117554 4469022..4470107 1 NC_012912.1 TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; KEGG: dar:Daro_0152 lipopolysaccharide heptosyltransferase III, putative; lipopolysaccharide heptosyltransferase III 4470107 8117554 Dd1591_3949 Dickeya zeae Ech1591 lipopolysaccharide heptosyltransferase III YP_003006228.1 4469022 D 561229 CDS YP_003006229.1 251791508 8117555 4470104..4471222 1 NC_012912.1 PFAM: glycosyl transferase group 1; KEGG: eta:ETA_00760 glycosyl transferase, group 1; glycosyl transferase group 1 4471222 8117555 Dd1591_3950 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003006229.1 4470104 D 561229 CDS YP_003006230.1 251791509 8117556 complement(4471300..4472508) 1 NC_012912.1 PFAM: O-antigen polymerase; KEGG: hch:HCH_01051 O-antigen polymerase; O-antigen polymerase 4472508 8117556 Dd1591_3951 Dickeya zeae Ech1591 O-antigen polymerase YP_003006230.1 4471300 R 561229 CDS YP_003006231.1 251791510 8117557 complement(4472508..4473614) 1 NC_012912.1 PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A3288 putative lipopolysaccharide core biosynthesis glycosyltransferase protein; glycosyl transferase family 9 4473614 8117557 Dd1591_3952 Dickeya zeae Ech1591 glycosyl transferase family 9 YP_003006231.1 4472508 R 561229 CDS YP_003006232.1 251791511 8117558 complement(4473611..4474735) 1 NC_012912.1 PFAM: glycosyl transferase group 1; KEGG: plu:plu4862 WalR protein; glycosyl transferase group 1 4474735 8117558 Dd1591_3953 Dickeya zeae Ech1591 glycosyl transferase group 1 YP_003006232.1 4473611 R 561229 CDS YP_003006233.1 251791512 8117559 4475278..4476561 1 NC_012912.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 4476561 8117559 Dd1591_3954 Dickeya zeae Ech1591 3-deoxy-D-manno-octulosonic-acid transferase YP_003006233.1 4475278 D 561229 CDS YP_003006234.1 251791513 8117560 4476561..4477352 1 NC_012912.1 PFAM: glycosyl transferase family 2; KEGG: yen:YE0068 lipopolysaccharide core biosynthesis glycosyl transferase; glycosyl transferase family 2 4477352 8117560 Dd1591_3955 Dickeya zeae Ech1591 glycosyl transferase family 2 YP_003006234.1 4476561 D 561229 CDS YP_003006235.1 251791514 8117561 4477342..4477821 1 NC_012912.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 4477821 coaD 8117561 coaD Dickeya zeae Ech1591 phosphopantetheine adenylyltransferase YP_003006235.1 4477342 D 561229 CDS YP_003006236.1 251791515 8117562 complement(4477869..4478678) 1 NC_012912.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4478678 8117562 Dd1591_3957 Dickeya zeae Ech1591 formamidopyrimidine-DNA glycosylase YP_003006236.1 4477869 R 561229 CDS YP_003006237.1 251791516 8117563 complement(4478781..4478948) 1 NC_012912.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: yps:YPTB0048 50S ribosomal protein L33; 50S ribosomal protein L33 4478948 8117563 Dd1591_3958 Dickeya zeae Ech1591 50S ribosomal protein L33 YP_003006237.1 4478781 R 561229 CDS YP_003006238.1 251791517 8117564 complement(4478960..4479196) 1 NC_012912.1 required for 70S ribosome assembly; 50S ribosomal protein L28 4479196 rpmB 8117564 rpmB Dickeya zeae Ech1591 50S ribosomal protein L28 YP_003006238.1 4478960 R 561229 CDS YP_003006239.1 251791518 8117565 complement(4479435..4480100) 1 NC_012912.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 4480100 radC 8117565 radC Dickeya zeae Ech1591 DNA repair protein RadC YP_003006239.1 4479435 R 561229 CDS YP_003006240.1 251791519 8117566 4480429..4481685 1 NC_012912.1 KEGG: spe:Spro_4843 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 4481685 8117566 Dd1591_3961 Dickeya zeae Ech1591 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_003006240.1 4480429 D 561229 CDS YP_003006241.1 251791520 8117567 4481654..4482112 1 NC_012912.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: eca:ECA0143 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 4482112 8117567 Dd1591_3962 Dickeya zeae Ech1591 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_003006241.1 4481654 D 561229 CDS YP_003006242.1 251791521 8117568 4482220..4482816 1 NC_012912.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 4482816 slmA 8117568 slmA Dickeya zeae Ech1591 nucleoid occlusion protein YP_003006242.1 4482220 D 561229 CDS YP_003006243.1 251791522 8117569 complement(4482864..4483505) 1 NC_012912.1 KEGG: eca:ECA0141 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 4483505 8117569 Dd1591_3964 Dickeya zeae Ech1591 orotate phosphoribosyltransferase YP_003006243.1 4482864 R 561229 CDS YP_003006244.1 251791523 8117570 complement(4483590..4484306) 1 NC_012912.1 KEGG: eca:ECA0140 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 4484306 8117570 Dd1591_3965 Dickeya zeae Ech1591 ribonuclease PH YP_003006244.1 4483590 R 561229 CDS YP_003006245.1 251791524 8117571 4484486..4484878 1 NC_012912.1 PFAM: protein of unknown function DUF202; KEGG: eca:ECA3000 hypothetical protein; hypothetical protein 4484878 8117571 Dd1591_3966 Dickeya zeae Ech1591 hypothetical protein YP_003006245.1 4484486 D 561229 CDS YP_003006246.1 251791525 8117572 4484885..4485217 1 NC_012912.1 KEGG: eca:ECA3001 hypothetical protein; hypothetical protein 4485217 8117572 Dd1591_3967 Dickeya zeae Ech1591 hypothetical protein YP_003006246.1 4484885 D 561229 CDS YP_003006247.1 251791526 8117573 4485473..4486480 1 NC_012912.1 PFAM: protein of unknown function DUF1611; KEGG: ppr:PBPRA1897 hypothetical protein; hypothetical protein 4486480 8117573 Dd1591_3968 Dickeya zeae Ech1591 hypothetical protein YP_003006247.1 4485473 D 561229 CDS YP_003006248.1 251791527 8117574 4486485..4487450 1 NC_012912.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0139 putative mandelate racemase / muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein 4487450 8117574 Dd1591_3969 Dickeya zeae Ech1591 mandelate racemase/muconate lactonizing protein YP_003006248.1 4486485 D 561229 CDS YP_003006249.1 251791528 8117575 4487471..4489393 1 NC_012912.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: eca:ECA0138 ABC transporter ATP-binding protein; ABC transporter 4489393 8117575 Dd1591_3970 Dickeya zeae Ech1591 ABC transporter YP_003006249.1 4487471 D 561229 CDS YP_003006250.1 251791529 8117576 4489567..4491123 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0137 ABC transporter periplasmic binding protein; extracellular solute-binding protein family 5 4491123 8117576 Dd1591_3971 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003006250.1 4489567 D 561229 CDS YP_003006251.1 251791530 8117577 4491141..4492061 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0136 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 4492061 8117577 Dd1591_3972 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006251.1 4491141 D 561229 CDS YP_003006252.1 251791531 8117578 4492070..4492972 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0135 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 4492972 8117578 Dd1591_3973 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006252.1 4492070 D 561229 CDS YP_003006253.1 251791532 8117579 4492984..4494039 1 NC_012912.1 PFAM: peptidase S58 DmpA; KEGG: eca:ECA0134 putative peptidase; peptidase S58 DmpA 4494039 8117579 Dd1591_3974 Dickeya zeae Ech1591 peptidase S58 DmpA YP_003006253.1 4492984 D 561229 CDS YP_003006254.1 251791533 8117580 4494071..4494892 1 NC_012912.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: eca:ECA0133 hypothetical protein; peptidase M55 D-aminopeptidase 4494892 8117580 Dd1591_3975 Dickeya zeae Ech1591 peptidase M55 D-aminopeptidase YP_003006254.1 4494071 D 561229 CDS YP_003006255.1 251791534 8117581 4494923..4495885 1 NC_012912.1 PFAM: peptidase T2 asparaginase 2; KEGG: eca:ECA0132 L-asparaginase; peptidase T2 asparaginase 2 4495885 8117581 Dd1591_3976 Dickeya zeae Ech1591 peptidase T2 asparaginase 2 YP_003006255.1 4494923 D 561229 CDS YP_003006256.1 251791535 8117582 4496129..4496608 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA0176 hypothetical protein; Hcp1 family type VI secretion system effector 4496608 8117582 Dd1591_3977 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003006256.1 4496129 D 561229 CDS YP_003006257.1 251791536 8117583 4496618..4497322 1 NC_012912.1 KEGG: eca:ECA0177 hypothetical protein; hypothetical protein 4497322 8117583 Dd1591_3978 Dickeya zeae Ech1591 hypothetical protein YP_003006257.1 4496618 D 561229 CDS YP_003006258.1 251791537 8117584 4497324..4497629 1 NC_012912.1 KEGG: eta:ETA_34450 hypothetical protein; hypothetical protein 4497629 8117584 Dd1591_3979 Dickeya zeae Ech1591 hypothetical protein YP_003006258.1 4497324 D 561229 CDS YP_003006259.1 251791538 8117585 complement(4497745..4499007) 1 NC_012912.1 PFAM: secretion protein HlyD family protein; KEGG: esa:ESA_01116 hypothetical protein; secretion protein HlyD family protein 4499007 8117585 Dd1591_3980 Dickeya zeae Ech1591 secretion protein HlyD family protein YP_003006259.1 4497745 R 561229 CDS YP_003006260.1 251791539 8117586 complement(4499000..4500481) 1 NC_012912.1 PFAM: outer membrane efflux protein; KEGG: plu:plu2646 hypothetical protein; outer membrane efflux protein 4500481 8117586 Dd1591_3981 Dickeya zeae Ech1591 outer membrane efflux protein YP_003006260.1 4499000 R 561229 CDS YP_003006261.1 251791540 8119581 complement(4500474..4501694) 1 NC_012912.1 PFAM: protein of unknown function DUF214; KEGG: plu:plu2647 hypothetical protein; hypothetical protein 4501694 8119581 Dd1591_3982 Dickeya zeae Ech1591 hypothetical protein YP_003006261.1 4500474 R 561229 CDS YP_003006262.1 251791541 8119582 complement(4501687..4502388) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppw:PputW619_0892 ABC transporter related; ABC transporter 4502388 8119582 Dd1591_3983 Dickeya zeae Ech1591 ABC transporter YP_003006262.1 4501687 R 561229 CDS YP_003006263.1 251791542 8119583 complement(4502666..4503427) 1 NC_012912.1 KEGG: ent:Ent638_0389 hypothetical protein; hypothetical protein 4503427 8119583 Dd1591_3984 Dickeya zeae Ech1591 hypothetical protein YP_003006263.1 4502666 R 561229 CDS YP_003006264.1 251791543 8119584 complement(4503447..4504208) 1 NC_012912.1 KEGG: ent:Ent638_0389 hypothetical protein; hypothetical protein 4504208 8119584 Dd1591_3985 Dickeya zeae Ech1591 hypothetical protein YP_003006264.1 4503447 R 561229 CDS YP_003006265.1 251791544 8119585 complement(4504227..4504991) 1 NC_012912.1 KEGG: ent:Ent638_0389 hypothetical protein; hypothetical protein 4504991 8119585 Dd1591_3986 Dickeya zeae Ech1591 hypothetical protein YP_003006265.1 4504227 R 561229 CDS YP_003006266.1 251791545 8119586 complement(4505115..4505585) 1 NC_012912.1 KEGG: plu:plu2640 hypothetical protein; hypothetical protein 4505585 8119586 Dd1591_3987 Dickeya zeae Ech1591 hypothetical protein YP_003006266.1 4505115 R 561229 CDS YP_003006267.1 251791546 8119587 complement(4505999..4507510) 1 NC_012912.1 PFAM: beta-lactamase; KEGG: spe:Spro_2075 beta-lactamase; beta-lactamase 4507510 8119587 Dd1591_3988 Dickeya zeae Ech1591 beta-lactamase YP_003006267.1 4505999 R 561229 CDS YP_003006268.1 251791547 8119588 complement(4507507..4508247) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4567 oligopeptide transport ATP-binding protein AppF; ABC transporter 4508247 8119588 Dd1591_3989 Dickeya zeae Ech1591 ABC transporter YP_003006268.1 4507507 R 561229 CDS YP_003006269.1 251791548 8119589 complement(4508260..4509090) 1 NC_012912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4569 dipeptide transporter DppD homolog; ABC transporter 4509090 8119589 Dd1591_3990 Dickeya zeae Ech1591 ABC transporter YP_003006269.1 4508260 R 561229 CDS YP_003006270.1 251791549 8119590 complement(4509091..4509993) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3739 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4509993 8119590 Dd1591_3991 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006270.1 4509091 R 561229 CDS YP_003006271.1 251791550 8119591 complement(4509990..4511000) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3740 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4511000 8119591 Dd1591_3992 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006271.1 4509990 R 561229 CDS YP_003006272.1 251791551 8119592 complement(4511000..4512595) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_C_4574 putative hemin-binding lipoprotein; extracellular solute-binding protein family 5 4512595 8119592 Dd1591_3993 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003006272.1 4511000 R 561229 CDS YP_003006273.1 251791552 8119593 4512796..4513878 1 NC_012912.1 PFAM: peptidase M19 renal dipeptidase; KEGG: atc:AGR_C_4575 membrane dipeptidase homolog; Membrane dipeptidase 4513878 8119593 Dd1591_3994 Dickeya zeae Ech1591 Membrane dipeptidase YP_003006273.1 4512796 D 561229 CDS YP_003006274.1 251791553 8119594 4514007..4514915 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0131 LysR family transcriptional regulator; LysR family transcriptional regulator 4514915 8119594 Dd1591_3995 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003006274.1 4514007 D 561229 CDS YP_003006275.1 251791554 8119595 4515046..4515909 1 NC_012912.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: eca:ECA0130 hypothetical protein; hypothetical protein 4515909 8119595 Dd1591_3996 Dickeya zeae Ech1591 hypothetical protein YP_003006275.1 4515046 D 561229 CDS YP_003006276.1 251791555 8119596 4516098..4517357 1 NC_012912.1 PFAM: integrase family protein; KEGG: sbo:SBO_3647 putative integrase; integrase family protein 4517357 8119596 Dd1591_3997 Dickeya zeae Ech1591 integrase family protein YP_003006276.1 4516098 D 561229 CDS YP_003006277.1 251791556 8119597 4517727..4518239 1 NC_012912.1 KEGG: eca:ECA2751 putative phage-related protein; putative phage-related protein 4518239 8119597 Dd1591_3998 Dickeya zeae Ech1591 putative phage-related protein YP_003006277.1 4517727 D 561229 CDS YP_003006278.1 251791557 8119598 4518339..4518560 1 NC_012912.1 PFAM: Prophage CP4-57 regulatory; KEGG: sbc:SbBS512_E4074 prophage CP4-57 transcriptional regulator protein, AlpA family; phage transcriptional regulator AlpA 4518560 8119598 Dd1591_3999 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003006278.1 4518339 D 561229 CDS YP_003006279.1 251791558 8119599 4518557..4519003 1 NC_012912.1 KEGG: eta:ETA_24300 hypothetical protein; hypothetical protein 4519003 8119599 Dd1591_4000 Dickeya zeae Ech1591 hypothetical protein YP_003006279.1 4518557 D 561229 CDS YP_003006280.1 251791559 8119600 4519018..4519860 1 NC_012912.1 PFAM: AntA/AntB antirepressor domain protein; KEGG: eta:ETA_24290 putative phage anti-repressor protein; AntA/AntB antirepressor domain-containing protein 4519860 8119600 Dd1591_4001 Dickeya zeae Ech1591 AntA/AntB antirepressor domain-containing protein YP_003006280.1 4519018 D 561229 CDS YP_003006281.1 251791560 8119602 4520405..4520593 1 NC_012912.1 KEGG: eca:ECA0668 hypothetical protein; hypothetical protein 4520593 8119602 Dd1591_4003 Dickeya zeae Ech1591 hypothetical protein YP_003006281.1 4520405 D 561229 CDS YP_003006282.1 251791561 8119603 4520586..4520759 1 NC_012912.1 hypothetical protein 4520759 8119603 Dd1591_4004 Dickeya zeae Ech1591 hypothetical protein YP_003006282.1 4520586 D 561229 CDS YP_003006283.1 251791562 8119604 4520752..4520970 1 NC_012912.1 KEGG: eck:EC55989_0275 hypothetical protein; hypothetical protein 4520970 8119604 Dd1591_4005 Dickeya zeae Ech1591 hypothetical protein YP_003006283.1 4520752 D 561229 CDS YP_003006284.1 251791563 8119605 4520967..4521596 1 NC_012912.1 KEGG: eta:ETA_24230 conserved hypothetical protein, related to bacteriophage P27; hypothetical protein 4521596 8119605 Dd1591_4006 Dickeya zeae Ech1591 hypothetical protein YP_003006284.1 4520967 D 561229 CDS YP_003006285.1 251791564 8119606 4521607..4524306 1 NC_012912.1 PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein; KEGG: eta:ETA_24220 putative prophage primase; hypothetical protein 4524306 8119606 Dd1591_4007 Dickeya zeae Ech1591 hypothetical protein YP_003006285.1 4521607 D 561229 CDS YP_003006286.1 251791565 8119607 4524766..4524954 1 NC_012912.1 KEGG: ecg:E2348C_3896 hypothetical protein; hypothetical protein 4524954 8119607 Dd1591_4008 Dickeya zeae Ech1591 hypothetical protein YP_003006286.1 4524766 D 561229 CDS YP_003006287.1 251791566 8119608 4524938..4526584 1 NC_012912.1 KEGG: ypi:YpsIP31758_2206 lysozyme; hypothetical protein 4526584 8119608 Dd1591_4009 Dickeya zeae Ech1591 hypothetical protein YP_003006287.1 4524938 D 561229 CDS YP_003006288.1 251791567 8119609 4526663..4527400 1 NC_012912.1 KEGG: eck:EC55989_2615 putative terminase small subunit; hypothetical protein 4527400 8119609 Dd1591_4010 Dickeya zeae Ech1591 hypothetical protein YP_003006288.1 4526663 D 561229 CDS YP_003006289.1 251791568 8119610 complement(4527476..4528801) 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 4528801 8119610 Dd1591_4011 Dickeya zeae Ech1591 transposase IS4 family protein YP_003006289.1 4527476 R 561229 CDS YP_003006290.1 251791569 8119611 4529076..4530026 1 NC_012912.1 PFAM: Abi family protein; KEGG: eba:ebA5889 hypothetical protein; Abi family protein 4530026 8119611 Dd1591_4012 Dickeya zeae Ech1591 Abi family protein YP_003006290.1 4529076 D 561229 CDS YP_003006291.1 251791570 8119612 4530019..4530225 1 NC_012912.1 hypothetical protein 4530225 8119612 Dd1591_4013 Dickeya zeae Ech1591 hypothetical protein YP_003006291.1 4530019 D 561229 CDS YP_003006292.1 251791571 8119613 4530432..4531757 1 NC_012912.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_05087 hypothetical protein; transposase IS4 family protein 4531757 8119613 Dd1591_4014 Dickeya zeae Ech1591 transposase IS4 family protein YP_003006292.1 4530432 D 561229 CDS YP_003006293.1 251791572 8119615 4532241..4535543 1 NC_012912.1 KEGG: rlt:Rleg2_3992 hypothetical protein; hypothetical protein 4535543 8119615 Dd1591_4016 Dickeya zeae Ech1591 hypothetical protein YP_003006293.1 4532241 D 561229 CDS YP_003006294.1 251791573 8119616 complement(4535756..4536853) 1 NC_012912.1 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 4536853 8119616 Dd1591_4017 Dickeya zeae Ech1591 agmatine deiminase YP_003006294.1 4535756 R 561229 CDS YP_003006295.1 251791574 8119617 complement(4536857..4537741) 1 NC_012912.1 TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eca:ECA4274 putative carbon-nitrogen hydrolase; N-carbamoylputrescine amidase 4537741 8119617 Dd1591_4018 Dickeya zeae Ech1591 N-carbamoylputrescine amidase YP_003006295.1 4536857 R 561229 CDS YP_003006296.1 251791575 8119618 complement(4538056..4539018) 1 NC_012912.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 4539018 8119618 Dd1591_4019 Dickeya zeae Ech1591 6-phosphofructokinase YP_003006296.1 4538056 R 561229 CDS YP_003006297.1 251791576 8119619 complement(4539265..4540167) 1 NC_012912.1 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F 4540167 fieF 8119619 fieF Dickeya zeae Ech1591 ferrous iron efflux protein F YP_003006297.1 4539265 R 561229 CDS YP_003006298.1 251791577 8119620 complement(4540296..4540766) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: kpe:KPK_2763 DNA-binding protein; XRE family transcriptional regulator 4540766 8119620 Dd1591_4021 Dickeya zeae Ech1591 XRE family transcriptional regulator YP_003006298.1 4540296 R 561229 CDS YP_003006299.1 251791578 8119621 4540983..4541444 1 NC_012912.1 PFAM: NUDIX hydrolase; KEGG: sea:SeAg_B4799 NUDIX hydrolase; NUDIX hydrolase 4541444 8119621 Dd1591_4022 Dickeya zeae Ech1591 NUDIX hydrolase YP_003006299.1 4540983 D 561229 CDS YP_003006300.1 251791579 8119622 complement(4541434..4541829) 1 NC_012912.1 PFAM: tail assembly chaperone gp38; KEGG: eum:ECUMN_0911 hypothetical protein; putative phage tail fiber assembly protein; tail assembly chaperone gp38 4541829 8119622 Dd1591_4023 Dickeya zeae Ech1591 tail assembly chaperone gp38 YP_003006300.1 4541434 R 561229 CDS YP_003006301.1 251791580 8119623 complement(4541826..4543184) 1 NC_012912.1 KEGG: ecz:ECS88_2817 putative variable tail fiber protein; Phage-related tail fiber protein-like protein 4543184 8119623 Dd1591_4024 Dickeya zeae Ech1591 Phage-related tail fiber protein-like protein YP_003006301.1 4541826 R 561229 CDS YP_003006302.1 251791581 8119624 complement(4543727..4544842) 1 NC_012912.1 PFAM: Tail Collar domain protein; KEGG: eta:ETA_05860 putative phage tail fiber protein; Tail Collar domain-containing protein 4544842 8119624 Dd1591_4025 Dickeya zeae Ech1591 Tail Collar domain-containing protein YP_003006302.1 4543727 R 561229 CDS YP_003006303.1 251791582 8119625 complement(4545131..4545751) 1 NC_012912.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu3024 hypothetical protein; tail assembly chaperone gp38 4545751 8119625 Dd1591_4026 Dickeya zeae Ech1591 tail assembly chaperone gp38 YP_003006303.1 4545131 R 561229 CDS YP_003006304.1 251791583 8119626 complement(4545751..4547691) 1 NC_012912.1 PFAM: Tail Collar domain protein; KEGG: eca:ECA2608 bacteriophage variable tail fiber protein H; Tail Collar domain-containing protein 4547691 8119626 Dd1591_4027 Dickeya zeae Ech1591 Tail Collar domain-containing protein YP_003006304.1 4545751 R 561229 CDS YP_003006305.1 251791584 8119627 complement(4547949..4548326) 1 NC_012912.1 KEGG: sfv:SFV_0255 putative phage tail fibre protein; putative phage tail fiber protein 4548326 8119627 Dd1591_4028 Dickeya zeae Ech1591 putative phage tail fiber protein YP_003006305.1 4547949 R 561229 CDS YP_003006306.1 251791585 8119628 complement(4548335..4549594) 1 NC_012912.1 KEGG: eca:ECA2608 bacteriophage variable tail fiber protein H; Phage-related tail fiber protein-like protein 4549594 8119628 Dd1591_4029 Dickeya zeae Ech1591 Phage-related tail fiber protein-like protein YP_003006306.1 4548335 R 561229 CDS YP_003006307.1 251791586 8119629 complement(4549850..4550227) 1 NC_012912.1 KEGG: sfv:SFV_0255 putative phage tail fibre protein; putative phage tail fiber protein 4550227 8119629 Dd1591_4030 Dickeya zeae Ech1591 putative phage tail fiber protein YP_003006307.1 4549850 R 561229 CDS YP_003006308.1 251791587 8119630 complement(4550657..4552114) 1 NC_012912.1 PFAM: Tail Collar domain protein; KEGG: eca:ECA2608 bacteriophage variable tail fiber protein H; Tail Collar domain-containing protein 4552114 8119630 Dd1591_4031 Dickeya zeae Ech1591 Tail Collar domain-containing protein YP_003006308.1 4550657 R 561229 CDS YP_003006309.1 251791588 8119631 complement(4552499..4553071) 1 NC_012912.1 KEGG: eca:ECA4310 putative stress resistance protein; putative stress resistance protein 4553071 8119631 Dd1591_4032 Dickeya zeae Ech1591 putative stress resistance protein YP_003006309.1 4552499 R 561229 CDS YP_003006310.1 251791589 8119632 4553248..4553946 1 NC_012912.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR 4553946 8119632 Dd1591_4033 Dickeya zeae Ech1591 DNA-binding transcriptional regulator CpxR YP_003006310.1 4553248 D 561229 CDS YP_003006311.1 251791590 8119633 4553963..4555333 1 NC_012912.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 4555333 cpxA 8119633 cpxA Dickeya zeae Ech1591 two-component sensor protein YP_003006311.1 4553963 D 561229 CDS YP_003006312.1 251791591 8119634 4555567..4557756 1 NC_012912.1 KEGG: eca:ECA4313 hypothetical protein; hypothetical protein 4557756 8119634 Dd1591_4035 Dickeya zeae Ech1591 hypothetical protein YP_003006312.1 4555567 D 561229 CDS YP_003006313.1 251791592 8119635 4557726..4558499 1 NC_012912.1 KEGG: eca:ECA4314 hypothetical protein; hypothetical protein 4558499 8119635 Dd1591_4036 Dickeya zeae Ech1591 hypothetical protein YP_003006313.1 4557726 D 561229 CDS YP_003006314.1 251791593 8119636 complement(4558516..4559055) 1 NC_012912.1 KEGG: bam:Bamb_5223 hypothetical protein; hypothetical protein 4559055 8119636 Dd1591_4037 Dickeya zeae Ech1591 hypothetical protein YP_003006314.1 4558516 R 561229 CDS YP_003006315.1 251791594 8119637 complement(4559105..4559569) 1 NC_012912.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: eca:ECA4315 putative RNA-methyltransferase; tRNA/rRNA methyltransferase (SpoU) 4559569 8119637 Dd1591_4038 Dickeya zeae Ech1591 tRNA/rRNA methyltransferase (SpoU) YP_003006315.1 4559105 R 561229 CDS YP_003006316.1 251791595 8119638 4559698..4559979 1 NC_012912.1 KEGG: eca:ECA4316 hypothetical protein; hypothetical protein 4559979 8119638 Dd1591_4039 Dickeya zeae Ech1591 hypothetical protein YP_003006316.1 4559698 D 561229 CDS YP_003006317.1 251791596 8119639 complement(4560051..4561007) 1 NC_012912.1 PFAM: Auxin Efflux Carrier; KEGG: eca:ECA4317 putative transporter; auxin efflux carrier 4561007 8119639 Dd1591_4040 Dickeya zeae Ech1591 auxin efflux carrier YP_003006317.1 4560051 R 561229 CDS YP_003006318.1 251791597 8119640 complement(4561192..4561935) 1 NC_012912.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase 4561935 ugpQ 8119640 ugpQ Dickeya zeae Ech1591 cytoplasmic glycerophosphodiester phosphodiesterase YP_003006318.1 4561192 R 561229 CDS YP_003006319.1 251791598 8119641 complement(4561932..4563008) 1 NC_012912.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 4563008 ugpC 8119641 ugpC Dickeya zeae Ech1591 glycerol-3-phosphate transporter ATP-binding subunit YP_003006319.1 4561932 R 561229 CDS YP_003006320.1 251791599 8119642 complement(4563015..4563863) 1 NC_012912.1 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 4563863 8119642 Dd1591_4043 Dickeya zeae Ech1591 glycerol-3-phosphate transporter membrane protein YP_003006320.1 4563015 R 561229 CDS YP_003006321.1 251791600 8119643 complement(4563890..4564777) 1 NC_012912.1 with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 4564777 8119643 Dd1591_4044 Dickeya zeae Ech1591 glycerol-3-phosphate transporter permease YP_003006321.1 4563890 R 561229 CDS YP_003006322.1 251791601 8119644 complement(4564866..4566185) 1 NC_012912.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 4566185 8119644 Dd1591_4045 Dickeya zeae Ech1591 glycerol-3-phosphate transporter periplasmic binding protein YP_003006322.1 4564866 R 561229 CDS YP_003006323.1 251791602 8119645 4567092..4568774 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4332 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4568774 8119645 Dd1591_4046 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003006323.1 4567092 D 561229 CDS YP_003006324.1 251791603 8119646 4569198..4570877 1 NC_012912.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4335 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4570877 8119646 Dd1591_4047 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003006324.1 4569198 D 561229 CDS YP_003006325.1 251791604 8119647 4571332..4572960 1 NC_012912.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4335 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4572960 8119647 Dd1591_4048 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003006325.1 4571332 D 561229 CDS YP_003006326.1 251791605 8119648 4573246..4573719 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: plu:plu0404 hypothetical protein; Hcp1 family type VI secretion system effector 4573719 8119648 Dd1591_4049 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003006326.1 4573246 D 561229 CDS YP_003006327.1 251791606 8119649 complement(4573912..4574313) 1 NC_012912.1 KEGG: sek:SSPA2223 probable secreted protein; hypothetical protein 4574313 8119649 Dd1591_4050 Dickeya zeae Ech1591 hypothetical protein YP_003006327.1 4573912 R 561229 CDS YP_003006328.1 251791607 8119650 complement(4574310..4575113) 1 NC_012912.1 PFAM: Peptidoglycan-binding domain 1 protein; glycoside hydrolase family 24; KEGG: btr:Btr_0306 phage-related lysozyme; peptidoglycan-binding domain 1 protein 4575113 8119650 Dd1591_4051 Dickeya zeae Ech1591 peptidoglycan-binding domain 1 protein YP_003006328.1 4574310 R 561229 CDS YP_003006329.1 251791608 8119651 complement(4575434..4576339) 1 NC_012912.1 KEGG: rru:Rru_A0564 hypothetical protein; hypothetical protein 4576339 8119651 Dd1591_4052 Dickeya zeae Ech1591 hypothetical protein YP_003006329.1 4575434 R 561229 CDS YP_003006330.1 251791609 8119652 4577034..4578671 1 NC_012912.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: aav:Aave_4495 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4578671 8119652 Dd1591_4053 Dickeya zeae Ech1591 methyl-accepting chemotaxis sensory transducer YP_003006330.1 4577034 D 561229 CDS YP_003006331.1 251791610 8119653 complement(4578751..4579935) 1 NC_012912.1 PFAM: aminotransferase class I and II; KEGG: eca:ECA4336 putative aminotransferase; GntR family transcriptional regulator 4579935 8119653 Dd1591_4054 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003006331.1 4578751 R 561229 CDS YP_003006332.1 251791611 8119654 complement(4580022..4580723) 1 NC_012912.1 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 4580723 livF 8119654 livF Dickeya zeae Ech1591 leucine/isoleucine/valine transporter ATP-binding subunit YP_003006332.1 4580022 R 561229 CDS YP_003006333.1 251791612 8119655 complement(4580730..4581500) 1 NC_012912.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 4581500 livG 8119655 livG Dickeya zeae Ech1591 leucine/isoleucine/valine transporter ATP-binding subunit YP_003006333.1 4580730 R 561229 CDS YP_003006334.1 251791613 8119656 complement(4581497..4582771) 1 NC_012912.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 4582771 livM 8119656 livM Dickeya zeae Ech1591 leucine/isoleucine/valine transporter permease subunit YP_003006334.1 4581497 R 561229 CDS YP_003006335.1 251791614 8119657 complement(4582768..4583694) 1 NC_012912.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease subunit LivH 4583694 8119657 Dd1591_4058 Dickeya zeae Ech1591 branched-chain amino acid transporter permease subunit LivH YP_003006335.1 4582768 R 561229 CDS YP_003006336.1 251791615 8119658 complement(4583773..4584885) 1 NC_012912.1 PFAM: Extracellular ligand-binding receptor; KEGG: eca:ECA4341 leucine-specific binding protein; Extracellular ligand-binding receptor 4584885 8119658 Dd1591_4059 Dickeya zeae Ech1591 Extracellular ligand-binding receptor YP_003006336.1 4583773 R 561229 CDS YP_003006337.1 251791616 8119659 4585289..4585708 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA4342 putative acetyltransferase; GCN5-related N-acetyltransferase 4585708 8119659 Dd1591_4060 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003006337.1 4585289 D 561229 CDS YP_003006338.1 251791617 8119660 4585730..4585858 1 NC_012912.1 hypothetical protein 4585858 8119660 Dd1591_4061 Dickeya zeae Ech1591 hypothetical protein YP_003006338.1 4585730 D 561229 CDS YP_003006339.1 251791618 8120914 complement(4585845..4586702) 1 NC_012912.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 4586702 8120914 Dd1591_4062 Dickeya zeae Ech1591 RNA polymerase factor sigma-32 YP_003006339.1 4585845 R 561229 CDS YP_003006340.1 251791619 8120915 complement(4587079..4588044) 1 NC_012912.1 putative ABC transporter, membrane protein; cell division protein FtsX 4588044 ftsX 8120915 ftsX Dickeya zeae Ech1591 cell division protein FtsX YP_003006340.1 4587079 R 561229 CDS YP_003006341.1 251791620 8120916 complement(4588034..4588702) 1 NC_012912.1 KEGG: sgl:SG0085 cell division protein FtsE; TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; Type II (general) Secretory Pathway (IISP) Family protein 4588702 8120916 Dd1591_4064 Dickeya zeae Ech1591 Type II (general) Secretory Pathway (IISP) Family protein YP_003006341.1 4588034 R 561229 CDS YP_003006342.1 251791621 8120917 complement(4588708..4590066) 1 NC_012912.1 KEGG: eca:ECA4346 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 4590066 8120917 Dd1591_4065 Dickeya zeae Ech1591 signal recognition particle-docking protein FtsY YP_003006342.1 4588708 R 561229 CDS YP_003006343.1 251791622 8120918 4590365..4590988 1 NC_012912.1 catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase 4590988 rsmD 8120918 rsmD Dickeya zeae Ech1591 16S rRNA m(2)G966-methyltransferase YP_003006343.1 4590365 D 561229 CDS YP_003006344.1 251791623 8120919 4590972..4591259 1 NC_012912.1 PFAM: protein of unknown function DUF1145; KEGG: eca:ECA4348 hypothetical protein; hypothetical protein 4591259 8120919 Dd1591_4067 Dickeya zeae Ech1591 hypothetical protein YP_003006344.1 4590972 D 561229 CDS YP_003006345.1 251791624 8120920 complement(4591335..4591661) 1 NC_012912.1 PFAM: Domain of unknown function DUF1820; KEGG: eca:ECA4350 hypothetical protein; hypothetical protein 4591661 8120920 Dd1591_4068 Dickeya zeae Ech1591 hypothetical protein YP_003006345.1 4591335 R 561229 CDS YP_003006346.1 251791625 8120921 complement(4592080..4592325) 1 NC_012912.1 PFAM: SirA family protein; KEGG: eca:ECA4353 cell developmental protein SirA; SirA family protein 4592325 8120921 Dd1591_4069 Dickeya zeae Ech1591 SirA family protein YP_003006346.1 4592080 R 561229 CDS YP_003006347.1 251791626 8120922 4592681..4593349 1 NC_012912.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: eca:ECA4354 hypothetical protein; hypothetical protein 4593349 8120922 Dd1591_4070 Dickeya zeae Ech1591 hypothetical protein YP_003006347.1 4592681 D 561229 CDS YP_003006348.1 251791627 8120923 4593554..4594117 1 NC_012912.1 KEGG: eca:ECA4355 hypothetical protein; hypothetical protein 4594117 8120923 Dd1591_4071 Dickeya zeae Ech1591 hypothetical protein YP_003006348.1 4593554 D 561229 CDS YP_003006349.1 251791628 8120924 complement(4594176..4595393) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4358 hypothetical protein; major facilitator superfamily transporter 4595393 8120924 Dd1591_4072 Dickeya zeae Ech1591 major facilitator superfamily transporter YP_003006349.1 4594176 R 561229 CDS YP_003006350.1 251791629 8120925 4595576..4596562 1 NC_012912.1 TIGRFAM: ribonuclease; PFAM: ribonuclease BN; KEGG: eca:ECA4359 hypothetical protein; ribonuclease 4596562 8120925 Dd1591_4073 Dickeya zeae Ech1591 ribonuclease YP_003006350.1 4595576 D 561229 CDS YP_003006351.1 251791630 8120926 4596594..4596797 1 NC_012912.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: yps:YPTB3829 tautomerase enzyme; 4-oxalocrotonate tautomerase family protein 4596797 8120926 Dd1591_4074 Dickeya zeae Ech1591 4-oxalocrotonate tautomerase family protein YP_003006351.1 4596594 D 561229 CDS YP_003006352.1 251791631 8120927 4596980..4597912 1 NC_012912.1 PFAM: PfkB domain protein; KEGG: eca:ECA4360 2-dehydro-3-deoxygluconokinase; PfkB domain-containing protein 4597912 8120927 Dd1591_4075 Dickeya zeae Ech1591 PfkB domain-containing protein YP_003006352.1 4596980 D 561229 CDS YP_003006353.1 251791632 8120928 4598358..4599383 1 NC_012912.1 KEGG: ecm:EcSMS35_4765 hypothetical protein; hypothetical protein 4599383 8120928 Dd1591_4076 Dickeya zeae Ech1591 hypothetical protein YP_003006353.1 4598358 D 561229 CDS YP_003006354.1 251791633 8120929 complement(4599613..4601070) 1 NC_012912.1 PFAM: peptidase M16 domain protein; KEGG: eca:ECA4361 putative peptidase; peptidase M16 domain-containing protein 4601070 8120929 Dd1591_4077 Dickeya zeae Ech1591 peptidase M16 domain-containing protein YP_003006354.1 4599613 R 561229 CDS YP_003006355.1 251791634 8120930 complement(4601545..4602831) 1 NC_012912.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 4602831 8120930 Dd1591_4078 Dickeya zeae Ech1591 C4-dicarboxylate transporter DctA YP_003006355.1 4601545 R 561229 CDS YP_003006356.1 251791635 8120931 complement(4603248..4604246) 1 NC_012912.1 PFAM: glycoside hydrolase family 8; KEGG: eta:ETA_33880 minor endoglucanase Y precursor (endo-1,4-beta-glucanase Y); Cellulase 4604246 8120931 Dd1591_4079 Dickeya zeae Ech1591 Cellulase YP_003006356.1 4603248 R 561229 CDS YP_003006357.1 251791636 8120932 complement(4604261..4604728) 1 NC_012912.1 KEGG: eta:ETA_33890 cellulose synthase operon protein D; cellulose synthase operon protein D 4604728 8120932 Dd1591_4080 Dickeya zeae Ech1591 cellulose synthase operon protein D YP_003006357.1 4604261 R 561229 CDS YP_003006358.1 251791637 8120933 complement(4604731..4608660) 1 NC_012912.1 PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: eta:ETA_33900 cellulose synthase operon protein C; cellulose synthase operon C domain-containing protein 4608660 8120933 Dd1591_4081 Dickeya zeae Ech1591 cellulose synthase operon C domain-containing protein YP_003006358.1 4604731 R 561229 CDS YP_003006359.1 251791638 8120934 complement(4608672..4611212) 1 NC_012912.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 4611212 8120934 Dd1591_4082 Dickeya zeae Ech1591 cellulose synthase regulator protein YP_003006359.1 4608672 R 561229 CDS YP_003006360.1 251791639 8120935 complement(4611209..4613299) 1 NC_012912.1 TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: eta:ETA_33920 cellulose synthase, cellulose synthase operon protein A; cellulose synthase catalytic subunit 4613299 8120935 Dd1591_4083 Dickeya zeae Ech1591 cellulose synthase catalytic subunit YP_003006360.1 4611209 R 561229 CDS YP_003006361.1 251791640 8120936 complement(4613408..4614223) 1 NC_012912.1 TIGRFAM: cellulose synthase operon protein YhjQ; KEGG: ent:Ent638_3941 hypothetical protein; cellulose synthase operon protein YhjQ 4614223 8120936 Dd1591_4084 Dickeya zeae Ech1591 cellulose synthase operon protein YhjQ YP_003006361.1 4613408 R 561229 CDS YP_003006362.1 251791641 8120937 complement(4614214..4614819) 1 NC_012912.1 KEGG: eta:ETA_33940 hypothetical protein; hypothetical protein 4614819 8120937 Dd1591_4085 Dickeya zeae Ech1591 hypothetical protein YP_003006362.1 4614214 R 561229 CDS YP_003006363.1 251791642 8120939 4615861..4616049 1 NC_012912.1 KEGG: spe:Spro_4310 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein 4616049 8120939 Dd1591_4087 Dickeya zeae Ech1591 helix-turn-helix domain-containing protein YP_003006363.1 4615861 D 561229 CDS YP_003006364.1 251791643 8120940 complement(join(4616046..4616540,4616540..4616890)) 1 NC_012912.1 KEGG: plu:plu4519 IS427 family transposase; transposase and inactivated derivatives-like protein 4616890 8120940 Dd1591_4088 Dickeya zeae Ech1591 transposase and inactivated derivatives-like protein YP_003006364.1 4616046 R 561229 CDS YP_003006365.1 251791644 8120941 4616959..4617057 1 NC_012912.1 hypothetical protein 4617057 8120941 Dd1591_4089 Dickeya zeae Ech1591 hypothetical protein YP_003006365.1 4616959 D 561229 CDS YP_003006366.1 251791645 8120942 4617050..4617172 1 NC_012912.1 KEGG: spe:Spro_4311 HipA domain-containing protein; hypothetical protein 4617172 8120942 Dd1591_4090 Dickeya zeae Ech1591 hypothetical protein YP_003006366.1 4617050 D 561229 CDS YP_003006367.1 251791646 8120943 4617492..4618178 1 NC_012912.1 KEGG: yps:YPTB1848 hypothetical protein; hypothetical protein 4618178 8120943 Dd1591_4091 Dickeya zeae Ech1591 hypothetical protein YP_003006367.1 4617492 D 561229 CDS YP_003006368.1 251791647 8120944 4618178..4618366 1 NC_012912.1 hypothetical protein 4618366 8120944 Dd1591_4092 Dickeya zeae Ech1591 hypothetical protein YP_003006368.1 4618178 D 561229 CDS YP_003006369.1 251791648 8120945 complement(4618386..4618865) 1 NC_012912.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA1069 hypothetical protein; Hcp1 family type VI secretion system effector 4618865 8120945 Dd1591_4093 Dickeya zeae Ech1591 Hcp1 family type VI secretion system effector YP_003006369.1 4618386 R 561229 CDS YP_003006370.1 251791649 8120946 complement(4619177..4620184) 1 NC_012912.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 4620184 dppF 8120946 dppF Dickeya zeae Ech1591 dipeptide transporter ATP-binding subunit YP_003006370.1 4619177 R 561229 CDS YP_003006371.1 251791650 8120947 complement(4620181..4621161) 1 NC_012912.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit 4621161 dppD 8120947 dppD Dickeya zeae Ech1591 dipeptide transporter ATP-binding subunit YP_003006371.1 4620181 R 561229 CDS YP_003006372.1 251791651 8120948 complement(4621190..4622092) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4392 dipeptide transporter; dipeptide transporter 4622092 8120948 Dd1591_4096 Dickeya zeae Ech1591 dipeptide transporter YP_003006372.1 4621190 R 561229 CDS YP_003006373.1 251791652 8120949 complement(4622106..4623125) 1 NC_012912.1 transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 4623125 8120949 Dd1591_4097 Dickeya zeae Ech1591 dipeptide transporter permease DppB YP_003006373.1 4622106 R 561229 CDS YP_003006374.1 251791653 8120950 complement(4623351..4624958) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4394 periplasmic dipeptide transport protein; extracellular solute-binding protein family 5 4624958 8120950 Dd1591_4098 Dickeya zeae Ech1591 extracellular solute-binding protein family 5 YP_003006374.1 4623351 R 561229 CDS YP_003006375.1 251791654 8120951 4626221..4627672 1 NC_012912.1 PFAM: Citrate carrier protein; KEGG: eca:ECA4395 Na(+)-malate symporter; Citrate carrier protein 4627672 8120951 Dd1591_4099 Dickeya zeae Ech1591 Citrate carrier protein YP_003006375.1 4626221 D 561229 CDS YP_003006376.1 251791655 8120952 4628142..4629494 1 NC_012912.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: bvi:Bcep1808_7013 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 4629494 8120952 Dd1591_4100 Dickeya zeae Ech1591 RNA-directed DNA polymerase YP_003006376.1 4628142 D 561229 CDS YP_003006377.1 251791656 8120953 complement(4629642..4630364) 1 NC_012912.1 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR 4630364 8120953 Dd1591_4101 Dickeya zeae Ech1591 DNA-binding transcriptional activator DcuR YP_003006377.1 4629642 R 561229 CDS YP_003006378.1 251791657 8120954 complement(4630377..4631990) 1 NC_012912.1 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS 4631990 8120954 Dd1591_4102 Dickeya zeae Ech1591 sensory histidine kinase DcuS YP_003006378.1 4630377 R 561229 CDS YP_003006379.1 251791658 8120955 complement(4632121..4633533) 1 NC_012912.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: eca:ECA4400 putative sodium:sulfate symporter; anion transporter 4633533 8120955 Dd1591_4103 Dickeya zeae Ech1591 anion transporter YP_003006379.1 4632121 R 561229 CDS YP_003006380.1 251791659 8120956 complement(4634237..4634686) 1 NC_012912.1 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 4634686 8120956 Dd1591_4104 Dickeya zeae Ech1591 heat shock chaperone IbpB YP_003006380.1 4634237 R 561229 CDS YP_003006381.1 251791660 8120957 complement(4634842..4635255) 1 NC_012912.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 4635255 8120957 Dd1591_4105 Dickeya zeae Ech1591 heat shock protein IbpA YP_003006381.1 4634842 R 561229 CDS YP_003006382.1 251791661 8120958 4635577..4635948 1 NC_012912.1 PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 hypothetical protein; hypothetical protein 4635948 8120958 Dd1591_4106 Dickeya zeae Ech1591 hypothetical protein YP_003006382.1 4635577 D 561229 CDS YP_003006383.1 251791662 8120959 complement(4636082..4637425) 1 NC_012912.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sed:SeD_A0233 major facilitator family transporter; general substrate transporter 4637425 8120959 Dd1591_4107 Dickeya zeae Ech1591 general substrate transporter YP_003006383.1 4636082 R 561229 CDS YP_003006384.1 251791663 8120961 complement(4637693..4638976) 1 NC_012912.1 KEGG: eca:ECA4405 hypothetical protein; hypothetical protein 4638976 8120961 Dd1591_4109 Dickeya zeae Ech1591 hypothetical protein YP_003006384.1 4637693 R 561229 CDS YP_003006385.1 251791664 8120962 4639212..4639469 1 NC_012912.1 PFAM: protein of unknown function DUF1471; KEGG: eca:ECA4406 hypothetical protein; hypothetical protein 4639469 8120962 Dd1591_4110 Dickeya zeae Ech1591 hypothetical protein YP_003006385.1 4639212 D 561229 CDS YP_003006386.1 251791665 8120963 complement(4639556..4640251) 1 NC_012912.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: csa:Csal_1739 transcriptional regulator, GntR family; GntR family transcriptional regulator 4640251 8120963 Dd1591_4111 Dickeya zeae Ech1591 GntR family transcriptional regulator YP_003006386.1 4639556 R 561229 CDS YP_003006387.1 251791666 8120964 4640509..4641693 1 NC_012912.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 4641693 8120964 Dd1591_4112 Dickeya zeae Ech1591 mannonate dehydratase YP_003006387.1 4640509 D 561229 CDS YP_003006388.1 251791667 8120965 complement(4641792..4642631) 1 NC_012912.1 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase 4642631 8120965 Dd1591_4113 Dickeya zeae Ech1591 sugar phosphatase YP_003006388.1 4641792 R 561229 CDS YP_003006389.1 251791668 8120966 complement(4642887..4643321) 1 NC_012912.1 PFAM: UspA domain protein; KEGG: eca:ECA0050 universal stress protein A; UspA domain-containing protein 4643321 8120966 Dd1591_4114 Dickeya zeae Ech1591 UspA domain-containing protein YP_003006389.1 4642887 R 561229 CDS YP_003006390.1 251791669 8120967 4643763..4643888 1 NC_012912.1 hypothetical protein 4643888 8120967 Dd1591_4115 Dickeya zeae Ech1591 hypothetical protein YP_003006390.1 4643763 D 561229 CDS YP_003006391.1 251791670 8120968 4643962..4644300 1 NC_012912.1 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB 4644300 8120968 Dd1591_4116 Dickeya zeae Ech1591 universal stress protein UspB YP_003006391.1 4643962 D 561229 CDS YP_003006392.1 251791671 8120969 complement(4644458..4645966) 1 NC_012912.1 PFAM: phosphate transporter; KEGG: eca:ECA0048 low-affinity inorganic phosphate transporter; phosphate transporter 4645966 8120969 Dd1591_4117 Dickeya zeae Ech1591 phosphate transporter YP_003006392.1 4644458 R 561229 CDS YP_003006393.1 251791672 8120970 4646270..4647454 1 NC_012912.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: spe:Spro_4688 hypothetical protein; hypothetical protein 4647454 8120970 Dd1591_4118 Dickeya zeae Ech1591 hypothetical protein YP_003006393.1 4646270 D 561229 CDS YP_003006394.1 251791673 8120971 4647552..4649000 1 NC_012912.1 PFAM: SMC domain protein; SMART: AAA ATPase; KEGG: ecm:EcSMS35_2489 SMC domain protein; SMC domain-containing protein 4649000 8120971 Dd1591_4119 Dickeya zeae Ech1591 SMC domain-containing protein YP_003006394.1 4647552 D 561229 CDS YP_003006395.1 251791674 8120972 4648984..4649607 1 NC_012912.1 KEGG: ecm:EcSMS35_2490 hypothetical protein; hypothetical protein 4649607 8120972 Dd1591_4120 Dickeya zeae Ech1591 hypothetical protein YP_003006395.1 4648984 D 561229 CDS YP_003006396.1 251791675 8120973 complement(4649711..4649977) 1 NC_012912.1 PFAM: protein of unknown function DUF1471; KEGG: plu:plu4502 hypothetical protein; hypothetical protein 4649977 8120973 Dd1591_4121 Dickeya zeae Ech1591 hypothetical protein YP_003006396.1 4649711 R 561229 CDS YP_003006397.1 251791676 8120974 complement(4650177..4651040) 1 NC_012912.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mlo:mll3063 hypothetical protein; Endonuclease/exonuclease/phosphatase 4651040 8120974 Dd1591_4122 Dickeya zeae Ech1591 Endonuclease/exonuclease/phosphatase YP_003006397.1 4650177 R 561229 CDS YP_003006398.1 251791677 8120975 complement(4651066..4652169) 1 NC_012912.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: avi:Avi_5254 ABC transporter nucleotide binding/ATPase protein (sugar); ABC transporter 4652169 8120975 Dd1591_4123 Dickeya zeae Ech1591 ABC transporter YP_003006398.1 4651066 R 561229 CDS YP_003006399.1 251791678 8120976 complement(4652173..4653219) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1293 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 4653219 8120976 Dd1591_4124 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006399.1 4652173 R 561229 CDS YP_003006400.1 251791679 8120977 complement(4653216..4654133) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: avi:Avi_5252 ABC transporter membrane spanning protein (sugar); binding-protein-dependent transport systems inner membrane component 4654133 8120977 Dd1591_4125 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006400.1 4653216 R 561229 CDS YP_003006401.1 251791680 8120978 complement(4654207..4655577) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_1296 putative multiple sugar transport system substrate-binding protein; extracellular solute-binding protein family 1 4655577 8120978 Dd1591_4126 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003006401.1 4654207 R 561229 CDS YP_003006402.1 251791681 8120979 4655678..4656781 1 NC_012912.1 PFAM: ROK family protein; KEGG: avi:Avi_5249 transcriptional regulator ROK family; ROK family protein 4656781 8120979 Dd1591_4127 Dickeya zeae Ech1591 ROK family protein YP_003006402.1 4655678 D 561229 CDS YP_003006403.1 251791682 8120980 complement(4656849..4657115) 1 NC_012912.1 PFAM: protein of unknown function DUF1471; KEGG: plu:plu4502 hypothetical protein; hypothetical protein 4657115 8120980 Dd1591_4128 Dickeya zeae Ech1591 hypothetical protein YP_003006403.1 4656849 R 561229 CDS YP_003006404.1 251791683 8120981 4657334..4658704 1 NC_012912.1 TIGRFAM: D-serine ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bvi:Bcep1808_3327 D-serine dehydratase; D-serine ammonia-lyase 4658704 8120981 Dd1591_4129 Dickeya zeae Ech1591 D-serine ammonia-lyase YP_003006404.1 4657334 D 561229 CDS YP_003006405.1 251791684 8120982 4658733..4659158 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vvu:VV1_2510 putative acetyltransferase; GCN5-related N-acetyltransferase 4659158 8120982 Dd1591_4130 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003006405.1 4658733 D 561229 CDS YP_003006406.1 251791685 8120983 complement(4659482..4660459) 1 NC_012912.1 KEGG: dac:Daci_1101 bile acid:sodium symporter; bile acid:sodium symporter 4660459 8120983 Dd1591_4131 Dickeya zeae Ech1591 bile acid:sodium symporter YP_003006406.1 4659482 R 561229 CDS YP_003006407.1 251791686 8120984 complement(4660604..4662052) 1 NC_012912.1 KEGG: cak:Caul_4076 phosphotransferase domain-containing protein; hypothetical protein 4662052 8120984 Dd1591_4132 Dickeya zeae Ech1591 hypothetical protein YP_003006407.1 4660604 R 561229 CDS YP_003006408.1 251791687 8120985 complement(4662045..4663325) 1 NC_012912.1 PFAM: extracellular solute-binding protein family 1; KEGG: dsh:Dshi_2014 extracellular solute-binding protein; extracellular solute-binding protein family 1 4663325 8120985 Dd1591_4133 Dickeya zeae Ech1591 extracellular solute-binding protein family 1 YP_003006408.1 4662045 R 561229 CDS YP_003006409.1 251791688 8120986 complement(4663325..4664212) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_0260 sugar ABC transporter permease; binding-protein-dependent transport systems inner membrane component 4664212 8120986 Dd1591_4134 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006409.1 4663325 R 561229 CDS YP_003006410.1 251791689 8120987 complement(4664224..4665132) 1 NC_012912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_78 probable binding protein dependent transport protein; binding-protein-dependent transport systems inner membrane component 4665132 8120987 Dd1591_4135 Dickeya zeae Ech1591 binding-protein-dependent transport systems inner membrane component YP_003006410.1 4664224 R 561229 CDS YP_003006411.1 251791690 8120988 4665402..4666685 1 NC_012912.1 PFAM: histidine acid phosphatase; KEGG: eca:ECA4198 putative exported phosphatase; Glucose-1-phosphatase 4666685 8120988 Dd1591_4136 Dickeya zeae Ech1591 Glucose-1-phosphatase YP_003006411.1 4665402 D 561229 CDS YP_003006412.1 251791691 8120989 complement(4666827..4667996) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3375 transporter; major facilitator superfamily protein 4667996 8120989 Dd1591_4137 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003006412.1 4666827 R 561229 CDS YP_003006413.1 251791692 8120990 complement(4668166..4669056) 1 NC_012912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3376 LysR family transcriptional regulator; LysR family transcriptional regulator 4669056 8120990 Dd1591_4138 Dickeya zeae Ech1591 LysR family transcriptional regulator YP_003006413.1 4668166 R 561229 CDS YP_003006414.1 251791693 8120991 complement(4669090..4670268) 1 NC_012912.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3953 transporter; major facilitator superfamily protein 4670268 8120991 Dd1591_4139 Dickeya zeae Ech1591 major facilitator superfamily protein YP_003006414.1 4669090 R 561229 CDS YP_003006415.1 251791694 8120992 4670491..4671099 1 NC_012912.1 KEGG: aha:AHA_3219 long-chain acyl-CoA synthetase; long-chain acyl-CoA synthetase 4671099 8120992 Dd1591_4140 Dickeya zeae Ech1591 long-chain acyl-CoA synthetase YP_003006415.1 4670491 D 561229 CDS YP_003006416.1 251791695 8120993 4671103..4671897 1 NC_012912.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: asa:ASA_1093 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4671897 8120993 Dd1591_4141 Dickeya zeae Ech1591 short-chain dehydrogenase/reductase SDR YP_003006416.1 4671103 D 561229 CDS YP_003006417.1 251791696 8117587 4671909..4672535 1 NC_012912.1 KEGG: aha:AHA_3221 TPR repeat-containing protein; TPR repeat-containing protein 4672535 8117587 Dd1591_4142 Dickeya zeae Ech1591 TPR repeat-containing protein YP_003006417.1 4671909 D 561229 CDS YP_003006418.1 251791697 8117589 complement(4673193..4674875) 1 NC_012912.1 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 4674875 8117589 Dd1591_4143 Dickeya zeae Ech1591 phosphoethanolamine transferase YP_003006418.1 4673193 R 561229 CDS YP_003006419.1 251791698 8117590 complement(4675241..4676923) 1 NC_012912.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB 4676923 ligB 8117590 ligB Dickeya zeae Ech1591 NAD-dependent DNA ligase LigB YP_003006419.1 4675241 R 561229 CDS YP_003006420.1 251791699 8117591 4677217..4677840 1 NC_012912.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 4677840 gmk 8117591 gmk Dickeya zeae Ech1591 guanylate kinase YP_003006420.1 4677217 D 561229 CDS YP_003006421.1 251791700 8117592 4677895..4678170 1 NC_012912.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: eca:ECA0039 DNA-directed RNA polymerase subunit omega; DNA-directed RNA polymerase subunit omega 4678170 8117592 Dd1591_4146 Dickeya zeae Ech1591 DNA-directed RNA polymerase subunit omega YP_003006421.1 4677895 D 561229 CDS YP_003006422.1 251791701 8117593 4678195..4680297 1 NC_012912.1 KEGG: eca:ECA0038 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 4680297 8117593 Dd1591_4147 Dickeya zeae Ech1591 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_003006422.1 4678195 D 561229 CDS YP_003006423.1 251791702 8117594 4680304..4680996 1 NC_012912.1 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 4680996 8117594 Dd1591_4148 Dickeya zeae Ech1591 tRNA guanosine-2'-O-methyltransferase YP_003006423.1 4680304 D 561229 CDS YP_003006424.1 251791703 8117595 4680996..4683077 1 NC_012912.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 4683077 8117595 Dd1591_4149 Dickeya zeae Ech1591 ATP-dependent DNA helicase RecG YP_003006424.1 4680996 D 561229 CDS YP_003006425.1 251791704 8117596 4683258..4684646 1 NC_012912.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: eta:ETA_00380 putative purine/xanthine transport protein; uracil-xanthine permease 4684646 8117596 Dd1591_4150 Dickeya zeae Ech1591 uracil-xanthine permease YP_003006425.1 4683258 D 561229 CDS YP_003006426.1 251791705 8117597 4684802..4686550 1 NC_012912.1 PFAM: AsmA family protein; KEGG: eca:ECA0034 hypothetical protein; AsmA family protein 4686550 8117597 Dd1591_4151 Dickeya zeae Ech1591 AsmA family protein YP_003006426.1 4684802 D 561229 CDS YP_003006427.1 251791706 8117598 complement(4686616..4687557) 1 NC_012912.1 TIGRFAM: thioesterase domain protein; PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0033 GNAT family acetyltransferase; thioesterase domain-containing protein 4687557 8117598 Dd1591_4152 Dickeya zeae Ech1591 thioesterase domain-containing protein YP_003006427.1 4686616 R 561229 CDS YP_003006428.1 251791707 8117599 complement(4687657..4688094) 1 NC_012912.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4688094 8117599 Dd1591_4153 Dickeya zeae Ech1591 D-tyrosyl-tRNA(Tyr) deacylase YP_003006428.1 4687657 R 561229 CDS YP_003006429.1 251791708 8117600 complement(4688102..4688713) 1 NC_012912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA0031 phosphatase; phosphatase 4688713 8117600 Dd1591_4154 Dickeya zeae Ech1591 phosphatase YP_003006429.1 4688102 R 561229 CDS YP_003006430.1 251791709 8117601 complement(4688934..4690757) 1 NC_012912.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: eum:ECUMN_4395 GTP-binding protein; GTP-binding protein TypA 4690757 8117601 Dd1591_4155 Dickeya zeae Ech1591 GTP-binding protein TypA YP_003006430.1 4688934 R 561229 CDS YP_003006431.1 251791710 8117602 4691132..4692541 1 NC_012912.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 4692541 glnA 8117602 glnA Dickeya zeae Ech1591 glutamine synthetase YP_003006431.1 4691132 D 561229 CDS YP_003006432.1 251791711 8117603 4692573..4692698 1 NC_012912.1 hypothetical protein 4692698 8117603 Dd1591_4157 Dickeya zeae Ech1591 hypothetical protein YP_003006432.1 4692573 D 561229 CDS YP_003006433.1 251791712 8117604 4692747..4693796 1 NC_012912.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 4693796 glnL 8117604 glnL Dickeya zeae Ech1591 nitrogen regulation protein NR(II) YP_003006433.1 4692747 D 561229 CDS YP_003006434.1 251791713 8117605 4693805..4695217 1 NC_012912.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 4695217 glnG 8117605 glnG Dickeya zeae Ech1591 nitrogen regulation protein NR(I) YP_003006434.1 4693805 D 561229 CDS YP_003006435.1 251791714 8117606 4695488..4695610 1 NC_012912.1 hypothetical protein 4695610 8117606 Dd1591_4160 Dickeya zeae Ech1591 hypothetical protein YP_003006435.1 4695488 D 561229 CDS YP_003006436.1 251791715 8117607 complement(4695814..4697187) 1 NC_012912.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4697187 8117607 Dd1591_4161 Dickeya zeae Ech1591 coproporphyrinogen III oxidase YP_003006436.1 4695814 R 561229 CDS YP_003006437.1 251791716 8117608 complement(4697368..4697901) 1 NC_012912.1 PFAM: protein of unknown function DUF414; KEGG: eca:ECA0024 hypothetical protein; hypothetical protein 4697901 8117608 Dd1591_4162 Dickeya zeae Ech1591 hypothetical protein YP_003006437.1 4697368 R 561229 CDS YP_003006438.1 251791717 8117609 4698125..4698769 1 NC_012912.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4698769 engB 8117609 engB Dickeya zeae Ech1591 ribosome biogenesis GTP-binding protein YsxC YP_003006438.1 4698125 D 561229 CDS YP_003006439.1 251791718 8117610 complement(4699243..4702029) 1 NC_012912.1 KEGG: eca:ECA0021 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; DNA polymerase I 4702029 8117610 Dd1591_4164 Dickeya zeae Ech1591 DNA polymerase I YP_003006439.1 4699243 R 561229 CDS YP_003006440.1 251791719 8117611 complement(4702407..4703030) 1 NC_012912.1 PFAM: DSBA oxidoreductase; KEGG: eca:ECA0020 periplasmic protein disulfide isomerase I; periplasmic protein disulfide isomerase I 4703030 8117611 Dd1591_4165 Dickeya zeae Ech1591 periplasmic protein disulfide isomerase I YP_003006440.1 4702407 R 561229 CDS YP_003006441.1 251791720 8117612 complement(4703053..4704039) 1 NC_012912.1 PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_4890 serine/threonine protein kinase; aminoglycoside phosphotransferase 4704039 8117612 Dd1591_4166 Dickeya zeae Ech1591 aminoglycoside phosphotransferase YP_003006441.1 4703053 R 561229 CDS YP_003006442.1 251791721 8117613 complement(4704075..4704344) 1 NC_012912.1 PFAM: protein of unknown function DUF1040; KEGG: eca:ECA0018 hypothetical protein; hypothetical protein 4704344 8117613 Dd1591_4167 Dickeya zeae Ech1591 hypothetical protein YP_003006442.1 4704075 R 561229 CDS YP_003006443.1 251791722 8117614 4704455..4705030 1 NC_012912.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4705030 mobA 8117614 mobA Dickeya zeae Ech1591 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_003006443.1 4704455 D 561229 CDS YP_003006444.1 251791723 8117615 4705023..4705541 1 NC_012912.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: spe:Spro_4893 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 4705541 8117615 Dd1591_4169 Dickeya zeae Ech1591 molybdopterin-guanine dinucleotide biosynthesis protein B YP_003006444.1 4705023 D 561229 CDS YP_003006445.1 251791724 8117620 complement(4711460..4712485) 1 NC_012912.1 DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR 4712485 8117620 Dd1591_4170 Dickeya zeae Ech1591 transcriptional repressor RbsR YP_003006445.1 4711460 R 561229 CDS YP_003006446.1 251791725 8117621 complement(4712498..4713430) 1 NC_012912.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 4713430 8117621 Dd1591_4171 Dickeya zeae Ech1591 ribokinase YP_003006446.1 4712498 R 561229 CDS YP_003006447.1 251791726 8117622 complement(4713507..4714397) 1 NC_012912.1 periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 4714397 8117622 Dd1591_4172 Dickeya zeae Ech1591 D-ribose transporter subunit RbsB YP_003006447.1 4713507 R 561229 CDS YP_003006448.1 251791727 8117623 complement(4714424..4715392) 1 NC_012912.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease protein 4715392 rbsC 8117623 rbsC Dickeya zeae Ech1591 ribose ABC transporter permease protein YP_003006448.1 4714424 R 561229 CDS YP_003006449.1 251791728 8117624 complement(4715400..4716905) 1 NC_012912.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP binding protein 4716905 8117624 Dd1591_4174 Dickeya zeae Ech1591 D-ribose transporter ATP binding protein YP_003006449.1 4715400 R 561229 CDS YP_003006450.1 251791729 8117625 complement(4716913..4717332) 1 NC_012912.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 4717332 8117625 Dd1591_4175 Dickeya zeae Ech1591 D-ribose pyranase YP_003006450.1 4716913 R 561229 CDS YP_003006451.1 251791730 8117626 complement(4717856..4718257) 1 NC_012912.1 PFAM: conserved hypothetical protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cko:CKO_04413 hypothetical protein; hypothetical protein 4718257 8117626 Dd1591_4176 Dickeya zeae Ech1591 hypothetical protein YP_003006451.1 4717856 R 561229 CDS YP_003006452.1 251791731 8117627 4718726..4719397 1 NC_012912.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0008 two-component system response regulator; winged helix family two component transcriptional regulator 4719397 8117627 Dd1591_4177 Dickeya zeae Ech1591 winged helix family two component transcriptional regulator YP_003006452.1 4718726 D 561229 CDS YP_003006453.1 251791732 8117628 4719384..4720733 1 NC_012912.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA0007 sensor protein QseC; sensor protein QseC 4720733 8117628 Dd1591_4178 Dickeya zeae Ech1591 sensor protein QseC YP_003006453.1 4719384 D 561229 CDS YP_003006454.1 251791733 8117629 complement(4720861..4722729) 1 NC_012912.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup 4722729 trkD 8117629 trkD Dickeya zeae Ech1591 potassium transport protein Kup YP_003006454.1 4720861 R 561229 CDS YP_003006455.1 251791734 8117630 4722992..4724488 1 NC_012912.1 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA 4724488 8117630 Dd1591_4180 Dickeya zeae Ech1591 regulatory ATPase RavA YP_003006455.1 4722992 D 561229 CDS YP_003006456.1 251791735 8117631 4724494..4725969 1 NC_012912.1 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 4725969 yieM 8117631 yieM Dickeya zeae Ech1591 hypothetical protein YP_003006456.1 4724494 D 561229 CDS YP_003006457.1 251791736 8117632 4726077..4726541 1 NC_012912.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 4726541 8117632 Dd1591_4182 Dickeya zeae Ech1591 DNA-binding transcriptional regulator AsnC YP_003006457.1 4726077 D 561229 CDS YP_003006458.1 251791737 8117633 4726632..4727075 1 NC_012912.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: eca:ECA0001 flavodoxin; flavodoxin/nitric oxide synthase 4727075 8117633 Dd1591_4183 Dickeya zeae Ech1591 flavodoxin/nitric oxide synthase YP_003006458.1 4726632 D 561229 CDS YP_003006459.1 251791738 8117634 4727454..4729343 1 NC_012912.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4729343 8117634 Dd1591_4184 Dickeya zeae Ech1591 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_003006459.1 4727454 D 561229 CDS YP_003006460.1 251791739 8117635 4729420..4730040 1 NC_012912.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: yen:YE4214 glucose-inhibited division protein B; methyltransferase GidB 4730040 8117635 Dd1591_4185 Dickeya zeae Ech1591 methyltransferase GidB YP_003006460.1 4729420 D 561229 CDS YP_003006461.1 251791740 8117636 4730127..4730288 1 NC_012912.1 hypothetical protein 4730288 8117636 Dd1591_4186 Dickeya zeae Ech1591 hypothetical protein YP_003006461.1 4730127 D 561229 CDS YP_003006462.1 251791741 8117637 4730661..4731044 1 NC_012912.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 4731044 8117637 Dd1591_4187 Dickeya zeae Ech1591 F0F1 ATP synthase subunit I YP_003006462.1 4730661 D 561229 CDS YP_003006463.1 251791742 8117638 4731067..4731858 1 NC_012912.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 4731858 8117638 Dd1591_4188 Dickeya zeae Ech1591 F0F1 ATP synthase subunit A YP_003006463.1 4731067 D 561229 CDS YP_003006464.1 251791743 8117639 4731907..4732146 1 NC_012912.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 4732146 8117639 Dd1591_4189 Dickeya zeae Ech1591 F0F1 ATP synthase subunit C YP_003006464.1 4731907 D 561229 CDS YP_003006465.1 251791744 8117640 4732210..4732680 1 NC_012912.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 4732680 8117640 Dd1591_4190 Dickeya zeae Ech1591 F0F1 ATP synthase subunit B YP_003006465.1 4732210 D 561229 CDS YP_003006466.1 251791745 8117641 4732695..4733228 1 NC_012912.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 4733228 8117641 Dd1591_4191 Dickeya zeae Ech1591 F0F1 ATP synthase subunit delta YP_003006466.1 4732695 D 561229 CDS YP_003006467.1 251791746 8117642 4733241..4734782 1 NC_012912.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4734782 8117642 Dd1591_4192 Dickeya zeae Ech1591 F0F1 ATP synthase subunit alpha YP_003006467.1 4733241 D 561229 CDS YP_003006468.1 251791747 8117643 4734836..4735699 1 NC_012912.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4735699 8117643 Dd1591_4193 Dickeya zeae Ech1591 F0F1 ATP synthase subunit gamma YP_003006468.1 4734836 D 561229 CDS YP_003006469.1 251791748 8117644 4735748..4737130 1 NC_012912.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 4737130 8117644 Dd1591_4194 Dickeya zeae Ech1591 F0F1 ATP synthase subunit beta YP_003006469.1 4735748 D 561229 CDS YP_003006470.1 251791749 8117645 4737151..4737573 1 NC_012912.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: eca:ECA4511 F0F1 ATP synthase subunit epsilon; ATP synthase F1 subunit epsilon 4737573 8117645 Dd1591_4195 Dickeya zeae Ech1591 ATP synthase F1 subunit epsilon YP_003006470.1 4737151 D 561229 CDS YP_003006471.1 251791750 8117646 complement(4737703..4739907) 1 NC_012912.1 KEGG: eca:ECA4510 exopolygalacturonate lyase; exopolygalacturonate lyase 4739907 8117646 Dd1591_4196 Dickeya zeae Ech1591 exopolygalacturonate lyase YP_003006471.1 4737703 R 561229 CDS YP_003006472.1 251791751 8117647 4740268..4741638 1 NC_012912.1 KEGG: spe:Spro_0010 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; UDP-N-acetylglucosamine pyrophosphorylase 4741638 8117647 Dd1591_4197 Dickeya zeae Ech1591 UDP-N-acetylglucosamine pyrophosphorylase YP_003006472.1 4740268 D 561229 CDS YP_003006473.1 251791752 8117648 4741908..4743743 1 NC_012912.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 4743743 8117648 Dd1591_4198 Dickeya zeae Ech1591 glucosamine--fructose-6-phosphate aminotransferase YP_003006473.1 4741908 D 561229 CDS YP_003006474.1 251791753 8117651 4744923..4745219 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: eci:UTI89_C4918 hypothetical protein; transposase IS3/IS911 family protein 4745219 8117651 Dd1591_4201 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003006474.1 4744923 D 561229 CDS YP_003006475.1 251791754 8117653 4746125..4746712 1 NC_012912.1 KEGG: slo:Shew_3662 hypothetical protein; hypothetical protein 4746712 8117653 Dd1591_4203 Dickeya zeae Ech1591 hypothetical protein YP_003006475.1 4746125 D 561229 CDS YP_003006476.1 251791755 8117654 complement(4747041..4749356) 1 NC_012912.1 KEGG: eca:ECA3625 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensors-containing diguanylate cyclase 4749356 8117654 Dd1591_4204 Dickeya zeae Ech1591 PAS/PAC and GAF sensors-containing diguanylate cyclase YP_003006476.1 4747041 R 561229 CDS YP_003006477.1 251791756 8117655 complement(4749731..4751167) 1 NC_012912.1 KEGG: rru:Rru_A2993 hypothetical protein; hypothetical protein 4751167 8117655 Dd1591_4205 Dickeya zeae Ech1591 hypothetical protein YP_003006477.1 4749731 R 561229 CDS YP_003006478.1 251791757 8117656 complement(4751312..4752601) 1 NC_012912.1 KEGG: rru:Rru_A2994 hypothetical protein; hypothetical protein 4752601 8117656 Dd1591_4206 Dickeya zeae Ech1591 hypothetical protein YP_003006478.1 4751312 R 561229 CDS YP_003006479.1 251791758 8117657 complement(4752598..4753011) 1 NC_012912.1 KEGG: rru:Rru_A2995 hypothetical protein; hypothetical protein 4753011 8117657 Dd1591_4207 Dickeya zeae Ech1591 hypothetical protein YP_003006479.1 4752598 R 561229 CDS YP_003006480.1 251791759 8117658 4753317..4754357 1 NC_012912.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA4477 phosphate transporter subunit; phosphate ABC transporter substrate-binding protein 4754357 8117658 Dd1591_4208 Dickeya zeae Ech1591 phosphate ABC transporter substrate-binding protein YP_003006480.1 4753317 D 561229 CDS YP_003006481.1 251791760 8117659 4754488..4755468 1 NC_012912.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 4755468 pstC 8117659 pstC Dickeya zeae Ech1591 phosphate transporter permease subunit PstC YP_003006481.1 4754488 D 561229 CDS YP_003006482.1 251791761 8117660 4755468..4756355 1 NC_012912.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 4756355 pstA 8117660 pstA Dickeya zeae Ech1591 phosphate transporter permease subunit PtsA YP_003006482.1 4755468 D 561229 CDS YP_003006483.1 251791762 8117661 4756465..4757241 1 NC_012912.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 4757241 pstB 8117661 pstB Dickeya zeae Ech1591 phosphate transporter ATP-binding protein YP_003006483.1 4756465 D 561229 CDS YP_003006484.1 251791763 8117662 4757255..4757983 1 NC_012912.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 4757983 8117662 Dd1591_4212 Dickeya zeae Ech1591 transcriptional regulator PhoU YP_003006484.1 4757255 D 561229 CDS YP_003006485.1 251791764 8117663 4758235..4759071 1 NC_012912.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4470 extracellular solute-binding protein; extracellular solute-binding protein family 3 4759071 8117663 Dd1591_4213 Dickeya zeae Ech1591 extracellular solute-binding protein family 3 YP_003006485.1 4758235 D 561229 CDS YP_003006486.1 251791765 8117664 4759208..4759951 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4468 binding-protein-dependent transport system inner membrane component; polar amino acid ABC transporter permease 4759951 8117664 Dd1591_4214 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003006486.1 4759208 D 561229 CDS YP_003006487.1 251791766 8117665 4759953..4760711 1 NC_012912.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4467 binding-protein-dependent transport system inner membrane component; polar amino acid ABC transporter permease 4760711 8117665 Dd1591_4215 Dickeya zeae Ech1591 polar amino acid ABC transporter permease YP_003006487.1 4759953 D 561229 CDS YP_003006488.1 251791767 8117666 complement(4760716..4761387) 1 NC_012912.1 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase 4761387 8117666 Dd1591_4216 Dickeya zeae Ech1591 6-phosphogluconate phosphatase YP_003006488.1 4760716 R 561229 CDS YP_003006489.1 251791768 8120142 4761661..4762998 1 NC_012912.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: eca:ECA4464 putative permease; Xanthine/uracil/vitamin C permease 4762998 8120142 Dd1591_4217 Dickeya zeae Ech1591 Xanthine/uracil/vitamin C permease YP_003006489.1 4761661 D 561229 CDS YP_003006490.1 251791769 8120143 complement(4763053..4763793) 1 NC_012912.1 KEGG: eca:ECA4463 hypothetical protein; hypothetical protein 4763793 8120143 Dd1591_4218 Dickeya zeae Ech1591 hypothetical protein YP_003006490.1 4763053 R 561229 CDS YP_003006491.1 251791770 8120144 complement(4764099..4764632) 1 NC_012912.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA4462 electron transport protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4764632 8120144 Dd1591_4219 Dickeya zeae Ech1591 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003006491.1 4764099 R 561229 CDS YP_003006492.1 251791771 8120145 complement(4764629..4766632) 1 NC_012912.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); putative oxidoreductase Fe-S binding subunit 4766632 8120145 Dd1591_4220 Dickeya zeae Ech1591 putative oxidoreductase Fe-S binding subunit YP_003006492.1 4764629 R 561229 CDS YP_003006493.1 251791772 8120146 4767238..4767909 1 NC_012912.1 PFAM: Curli production assembly/transport component CsgG; KEGG: eca:ECA4460 putative lipoprotein; Curli production assembly/transport component CsgG 4767909 8120146 Dd1591_4221 Dickeya zeae Ech1591 Curli production assembly/transport component CsgG YP_003006493.1 4767238 D 561229 CDS YP_003006494.1 251791773 8120147 4767928..4768281 1 NC_012912.1 KEGG: eca:ECA4459 putative lipoprotein; putative lipoprotein 4768281 8120147 Dd1591_4222 Dickeya zeae Ech1591 putative lipoprotein YP_003006494.1 4767928 D 561229 CDS YP_003006495.1 251791774 8120148 4768285..4768944 1 NC_012912.1 PFAM: protein of unknown function DUF799; KEGG: eca:ECA4458 putative lipoprotein; hypothetical protein 4768944 8120148 Dd1591_4223 Dickeya zeae Ech1591 hypothetical protein YP_003006495.1 4768285 D 561229 CDS YP_003006496.1 251791775 8120149 4769845..4770987 1 NC_012912.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 4770987 8120149 Dd1591_4224 Dickeya zeae Ech1591 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_003006496.1 4769845 D 561229 CDS YP_003006497.1 251791776 8120150 4770987..4771970 1 NC_012912.1 PFAM: glycosyl transferase family 2; KEGG: sgl:SG1844 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; glycosyl transferase family 2 4771970 8120150 Dd1591_4225 Dickeya zeae Ech1591 glycosyl transferase family 2 YP_003006497.1 4770987 D 561229 CDS YP_003006498.1 251791777 8120151 4771967..4773958 1 NC_012912.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 4773958 8120151 Dd1591_4226 Dickeya zeae Ech1591 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_003006498.1 4771967 D 561229 CDS YP_003006499.1 251791778 8120152 4773972..4774871 1 NC_012912.1 PFAM: polysaccharide deacetylase; KEGG: ent:Ent638_2076 polysaccharide deacetylase; polysaccharide deacetylase 4774871 8120152 Dd1591_4227 Dickeya zeae Ech1591 polysaccharide deacetylase YP_003006499.1 4773972 D 561229 CDS YP_003006500.1 251791779 8120153 4774871..4776529 1 NC_012912.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 4776529 arnT 8120153 arnT Dickeya zeae Ech1591 4-amino-4-deoxy-L-arabinose transferase YP_003006500.1 4774871 D 561229 CDS YP_003006501.1 251791780 8120154 4776526..4776867 1 NC_012912.1 KEGG: eta:ETA_23780 putative inner membrane protein; putative inner membrane protein 4776867 8120154 Dd1591_4229 Dickeya zeae Ech1591 putative inner membrane protein YP_003006501.1 4776526 D 561229 CDS YP_003006502.1 251791781 8120155 4776864..4777262 1 NC_012912.1 KEGG: ent:Ent638_2073 hypothetical protein; hypothetical protein 4777262 8120155 Dd1591_4230 Dickeya zeae Ech1591 hypothetical protein YP_003006502.1 4776864 D 561229 CDS YP_003006503.1 251791782 8120156 4777361..4777840 1 NC_012912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_17400 putative GNAT-family acetyltransferase; GCN5-related N-acetyltransferase 4777840 8120156 Dd1591_4231 Dickeya zeae Ech1591 GCN5-related N-acetyltransferase YP_003006503.1 4777361 D 561229 CDS YP_003006504.1 251791783 8120157 complement(4777946..4778557) 1 NC_012912.1 KEGG: atc:AGR_C_3633 conserved hypothetical protein PA0741; hypothetical protein 4778557 8120157 Dd1591_4232 Dickeya zeae Ech1591 hypothetical protein YP_003006504.1 4777946 R 561229 CDS YP_003006505.1 251791784 8120158 4778699..4779085 1 NC_012912.1 PFAM: helix-turn-helix HxlR type; KEGG: atc:AGR_C_3635 hypothetical protein; HxlR family transcriptional regulator 4779085 8120158 Dd1591_4233 Dickeya zeae Ech1591 HxlR family transcriptional regulator YP_003006505.1 4778699 D 561229 CDS YP_003006506.1 251791785 8120159 complement(4779241..4780329) 1 NC_012912.1 KEGG: dac:Daci_4795 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 4780329 8120159 Dd1591_4234 Dickeya zeae Ech1591 4-hydroxyphenylpyruvate dioxygenase YP_003006506.1 4779241 R 561229 CDS YP_003006507.1 251791786 8120160 4780651..4781424 1 NC_012912.1 KEGG: pfo:Pfl01_2954 beta-lactamase-like; beta-lactamase-like protein 4781424 8120160 Dd1591_4235 Dickeya zeae Ech1591 beta-lactamase-like protein YP_003006507.1 4780651 D 561229 CDS YP_003006508.1 251791787 8120161 4781469..4782446 1 NC_012912.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA2247 AraC family transcription regulator; AraC family transcriptional regulator 4782446 8120161 Dd1591_4236 Dickeya zeae Ech1591 AraC family transcriptional regulator YP_003006508.1 4781469 D 561229 CDS YP_003006509.1 251791788 8120162 complement(4782450..4783520) 1 NC_012912.1 KEGG: neu:NE2494 hypothetical protein; hypothetical protein 4783520 8120162 Dd1591_4237 Dickeya zeae Ech1591 hypothetical protein YP_003006509.1 4782450 R 561229 CDS YP_003006510.1 251791789 8120163 complement(4783520..4785286) 1 NC_012912.1 KEGG: neu:NE2495 ABC transporter; ABC transporter 4785286 8120163 Dd1591_4238 Dickeya zeae Ech1591 ABC transporter YP_003006510.1 4783520 R 561229 CDS YP_003006511.1 251791790 8120165 complement(4785558..4786868) 1 NC_012912.1 KEGG: neu:NE2496 restriction modification system, type I; Restriction endonuclease S subunits-like protein 4786868 8120165 Dd1591_4240 Dickeya zeae Ech1591 Restriction endonuclease S subunits-like protein YP_003006511.1 4785558 R 561229 CDS YP_003006512.1 251791791 8120166 complement(4786865..4788577) 1 NC_012912.1 PFAM: N-6 DNA methylase; putative RNA methylase; KEGG: neu:NE2497 type I restriction modification enzyme methylase subunit; N-6 DNA methylase 4788577 8120166 Dd1591_4241 Dickeya zeae Ech1591 N-6 DNA methylase YP_003006512.1 4786865 R 561229 CDS YP_003006513.1 251791792 8120167 complement(4788595..4789464) 1 NC_012912.1 KEGG: ajs:Ajs_0196 DNA-damage-inducible protein D; DNA-damage-inducible protein D 4789464 dinD 8120167 dinD Dickeya zeae Ech1591 DNA-damage-inducible protein D YP_003006513.1 4788595 R 561229 CDS YP_003006514.1 251791793 8120168 complement(4789495..4792296) 1 NC_012912.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; KEGG: neu:NE2499 DEAD/DEAH box helicase; type III restriction protein res subunit 4792296 8120168 Dd1591_4243 Dickeya zeae Ech1591 type III restriction protein res subunit YP_003006514.1 4789495 R 561229 CDS YP_003006515.1 251791794 8120169 complement(4792800..4794119) 1 NC_012912.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: plu:plu4900 HipA protein; HipA N-terminal domain-containing protein 4794119 8120169 Dd1591_4244 Dickeya zeae Ech1591 HipA N-terminal domain-containing protein YP_003006515.1 4792800 R 561229 CDS YP_003006516.1 251791795 8120170 complement(4794119..4794373) 1 NC_012912.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sbn:Sbal195_0378 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein 4794373 8120170 Dd1591_4245 Dickeya zeae Ech1591 helix-turn-helix domain-containing protein YP_003006516.1 4794119 R 561229 CDS YP_003006517.1 251791796 8120171 4794911..4795528 1 NC_012912.1 PFAM: Resolvase domain; KEGG: spc:Sputcn32_3979 resolvase domain-containing protein; Resolvase domain-containing protein 4795528 8120171 Dd1591_4246 Dickeya zeae Ech1591 Resolvase domain-containing protein YP_003006517.1 4794911 D 561229 CDS YP_003006518.1 251791797 8120172 complement(4795525..4795848) 1 NC_012912.1 KEGG: shm:Shewmr7_0345 hypothetical protein; hypothetical protein 4795848 8120172 Dd1591_4247 Dickeya zeae Ech1591 hypothetical protein YP_003006518.1 4795525 R 561229 CDS YP_003006519.1 251791798 8120173 complement(4795832..4795951) 1 NC_012912.1 hypothetical protein 4795951 8120173 Dd1591_4248 Dickeya zeae Ech1591 hypothetical protein YP_003006519.1 4795832 R 561229 CDS YP_003006520.1 251791799 8120175 complement(4796480..4799563) 1 NC_012912.1 PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase; hypothetical protein 4799563 8120175 Dd1591_4250 Dickeya zeae Ech1591 hypothetical protein YP_003006520.1 4796480 R 561229 CDS YP_003006521.1 251791800 8120176 complement(4799575..4800501) 1 NC_012912.1 PFAM: FRG domain protein; KEGG: gbm:Gbem_3768 FRG domain protein; FRG domain-containing protein 4800501 8120176 Dd1591_4251 Dickeya zeae Ech1591 FRG domain-containing protein YP_003006521.1 4799575 R 561229 CDS YP_003006522.1 251791801 8120177 complement(4800498..4801886) 1 NC_012912.1 PFAM: restriction modification system DNA specificity domain; KEGG: ccs:CCNA_00657 type I restriction-modification system specificity subunit; restriction modification system DNA specificity domain-containing protein 4801886 8120177 Dd1591_4252 Dickeya zeae Ech1591 restriction modification system DNA specificity domain-containing protein YP_003006522.1 4800498 R 561229 CDS YP_003006523.1 251791802 8120178 complement(4801883..4804009) 1 NC_012912.1 PFAM: N-6 DNA methylase; KEGG: mfa:Mfla_2604 N-6 DNA methylase; N-6 DNA methylase 4804009 8120178 Dd1591_4253 Dickeya zeae Ech1591 N-6 DNA methylase YP_003006523.1 4801883 R 561229 CDS YP_003006524.1 251791803 8120179 complement(4804006..4804194) 1 NC_012912.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: pmr:PMI3144 excisionase; phage transcriptional regulator AlpA 4804194 8120179 Dd1591_4254 Dickeya zeae Ech1591 phage transcriptional regulator AlpA YP_003006524.1 4804006 R 561229 CDS YP_003006525.1 251791804 8120180 4804589..4804924 1 NC_012912.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: spc:Sputcn32_3991 phage transcriptional regulator, AlpA; DNA binding domain-containing protein, excisionase family 4804924 8120180 Dd1591_4255 Dickeya zeae Ech1591 DNA binding domain-containing protein, excisionase family YP_003006525.1 4804589 D 561229 CDS YP_003006526.1 251791805 8120182 complement(4805084..4805899) 1 NC_012912.1 PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic region 4805899 8120182 Dd1591_4257 Dickeya zeae Ech1591 Integrase catalytic region YP_003006526.1 4805084 R 561229 CDS YP_003006527.1 251791806 8120183 complement(4805956..4806237) 1 NC_012912.1 PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 4806237 8120183 Dd1591_4258 Dickeya zeae Ech1591 transposase IS3/IS911 family protein YP_003006527.1 4805956 R 561229 CDS YP_003006528.1 251791807 8120184 4806275..4807021 1 NC_012912.1 KEGG: net:Neut_2254 putative DNA helicase; putative DNA helicase 4807021 8120184 Dd1591_4259 Dickeya zeae Ech1591 putative DNA helicase YP_003006528.1 4806275 D 561229 CDS YP_003006529.1 251791808 8120185 4807008..4807847 1 NC_012912.1 PFAM: replication C family protein; KEGG: sty:HCM1.221 putative replication protein; replication C family protein 4807847 8120185 Dd1591_4260 Dickeya zeae Ech1591 replication C family protein YP_003006529.1 4807008 D 561229 CDS YP_003006530.1 251791809 8120186 4807988..4808104 1 NC_012912.1 hypothetical protein 4808104 8120186 Dd1591_4261 Dickeya zeae Ech1591 hypothetical protein YP_003006530.1 4807988 D 561229 CDS YP_003006531.1 251791810 8120187 complement(4808057..4809196) 1 NC_012912.1 PFAM: integrase family protein; KEGG: spc:Sputcn32_4000 phage integrase family protein; integrase family protein 4809196 8120187 Dd1591_4262 Dickeya zeae Ech1591 integrase family protein YP_003006531.1 4808057 R 561229 CDS YP_003006532.1 251791811 8120188 complement(4809359..4810723) 1 NC_012912.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4810723 trmE 8120188 trmE Dickeya zeae Ech1591 tRNA modification GTPase TrmE YP_003006532.1 4809359 R 561229 CDS YP_003006533.1 251791812 8120189 complement(4810840..4812471) 1 NC_012912.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 4812471 8120189 Dd1591_4264 Dickeya zeae Ech1591 putative inner membrane protein translocase component YidC YP_003006533.1 4810840 R 561229 CDS YP_003006534.1 251791813 8120190 complement(4812474..4812731) 1 NC_012912.1 PFAM: protein of unknown function DUF37; KEGG: sgl:SG2430 hypothetical protein; hypothetical protein 4812731 8120190 Dd1591_4265 Dickeya zeae Ech1591 hypothetical protein YP_003006534.1 4812474 R 561229 CDS YP_003006535.1 251791814 8120191 complement(4812695..4813054) 1 NC_012912.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 4813054 rnpA 8120191 rnpA Dickeya zeae Ech1591 ribonuclease P YP_003006535.1 4812695 R 561229 CDS YP_003006536.1 251791815 8120192 complement(4813073..4813213) 1 NC_012912.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4813213 rpmH 8120192 rpmH Dickeya zeae Ech1591 50S ribosomal protein L34 YP_003006536.1 4813073 R 561229 CDS