-- dump date 20140619_065436 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002985642.1 242237461 8086532 188..1576 1 NC_012880.1 KEGG: ypk:y4113 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: replication initiation factor DnaA; ATPase AAA; chromosomal replication initiator protein DnaA 1576 8086532 Dd703_0001 Dickeya dadantii Ech703 chromosomal replication initiator protein DnaA YP_002985642.1 188 D 579405 CDS YP_002985643.1 242237462 8087423 1581..2681 1 NC_012880.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2681 8087423 Dd703_0002 Dickeya dadantii Ech703 DNA polymerase III subunit beta YP_002985643.1 1581 D 579405 CDS YP_002985644.1 242237463 8087424 2800..3885 1 NC_012880.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3885 recF 8087424 recF Dickeya dadantii Ech703 recombination protein F YP_002985644.1 2800 D 579405 CDS YP_002985645.1 242237464 8087425 3903..6314 1 NC_012880.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 6314 gyrB 8087425 gyrB Dickeya dadantii Ech703 DNA gyrase subunit B YP_002985645.1 3903 D 579405 CDS YP_002985646.1 242237465 8087426 complement(6528..7712) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4437 MFS efflux transporter; major facilitator superfamily protein 7712 8087426 Dd703_0005 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002985646.1 6528 R 579405 CDS YP_002985647.1 242237466 8087427 complement(7960..8823) 1 NC_012880.1 SMART: HNH nuclease; KEGG: hso:HS_0453 hypothetical protein; HNH nuclease 8823 8087427 Dd703_0006 Dickeya dadantii Ech703 HNH nuclease YP_002985647.1 7960 R 579405 CDS YP_002985648.1 242237467 8087428 complement(8816..9562) 1 NC_012880.1 KEGG: vsp:VS_1368 hypothetical protein; hypothetical protein 9562 8087428 Dd703_0007 Dickeya dadantii Ech703 hypothetical protein YP_002985648.1 8816 R 579405 CDS YP_002985649.1 242237468 8087429 complement(9566..11128) 1 NC_012880.1 KEGG: ecm:EcSMS35_4824 hypothetical protein; hypothetical protein 11128 8087429 Dd703_0008 Dickeya dadantii Ech703 hypothetical protein YP_002985649.1 9566 R 579405 CDS YP_002985650.1 242237469 8087430 complement(11561..12307) 1 NC_012880.1 predicted SAM-dependent methyltransferase; methyltransferase 12307 8087430 Dd703_0009 Dickeya dadantii Ech703 methyltransferase YP_002985650.1 11561 R 579405 CDS YP_002985651.1 242237470 8087431 complement(12310..14352) 1 NC_012880.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: eca:ECA0055 oligopeptidase A; oligopeptidase A 14352 8087431 Dd703_0010 Dickeya dadantii Ech703 oligopeptidase A YP_002985651.1 12310 R 579405 CDS YP_002985652.1 242237471 8087432 complement(14477..14761) 1 NC_012880.1 KEGG: eca:ECA0060 hypothetical protein; hypothetical protein 14761 8087432 Dd703_0011 Dickeya dadantii Ech703 hypothetical protein YP_002985652.1 14477 R 579405 CDS YP_002985653.1 242237472 8087433 14928..15770 1 NC_012880.1 PFAM: protein of unknown function DUF519; KEGG: plu:plu0374 hypothetical protein; hypothetical protein 15770 8087433 Dd703_0012 Dickeya dadantii Ech703 hypothetical protein YP_002985653.1 14928 D 579405 CDS YP_002985654.1 242237473 8087434 15968..17320 1 NC_012880.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 17320 8087434 Dd703_0013 Dickeya dadantii Ech703 glutathione reductase YP_002985654.1 15968 D 579405 CDS YP_002985655.1 242237474 8087435 complement(17493..20270) 1 NC_012880.1 KEGG: abu:Abu_1172 DNA helicase; DNA helicase 20270 8087435 Dd703_0014 Dickeya dadantii Ech703 DNA helicase YP_002985655.1 17493 R 579405 CDS YP_002985656.1 242237475 8087436 complement(20675..21709) 1 NC_012880.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: kpe:KPK_0472 peptidase, S15 family; alpha/beta hydrolase 21709 8087436 Dd703_0015 Dickeya dadantii Ech703 alpha/beta hydrolase YP_002985656.1 20675 R 579405 CDS YP_002985657.1 242237476 8087437 22163..22687 1 NC_012880.1 KEGG: avi:Avi_0040 hypothetical protein; hypothetical protein 22687 8087437 Dd703_0016 Dickeya dadantii Ech703 hypothetical protein YP_002985657.1 22163 D 579405 CDS YP_002985658.1 242237477 8087438 complement(22767..23414) 1 NC_012880.1 PFAM: protein of unknown function DUF161; KEGG: ppu:PP_0642 hypothetical protein; hypothetical protein 23414 8087438 Dd703_0017 Dickeya dadantii Ech703 hypothetical protein YP_002985658.1 22767 R 579405 CDS YP_002985659.1 242237478 8087439 23614..24084 1 NC_012880.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: reu:Reut_C6217 AsnC family transcriptional regulator; AsnC family transcriptional regulator 24084 8087439 Dd703_0018 Dickeya dadantii Ech703 AsnC family transcriptional regulator YP_002985659.1 23614 D 579405 CDS YP_002985660.1 242237479 8087440 complement(24074..25156) 1 NC_012880.1 KEGG: pap:PSPA7_1546 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain protein; methylguanine DNA methyltransferase ribonuclease domain protein; SMART: helix-turn-helix- domain containing protein AraC type; methylated-DNA--protein-cysteine methyltransferase 25156 8087440 Dd703_0019 Dickeya dadantii Ech703 methylated-DNA--protein-cysteine methyltransferase YP_002985660.1 24074 R 579405 CDS YP_002985661.1 242237480 8087441 25301..25756 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_2129 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 25756 8087441 Dd703_0020 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002985661.1 25301 D 579405 CDS YP_002985662.1 242237481 8087442 26097..26825 1 NC_012880.1 KEGG: vei:Veis_0626 hypothetical protein; hypothetical protein 26825 8087442 Dd703_0021 Dickeya dadantii Ech703 hypothetical protein YP_002985662.1 26097 D 579405 CDS YP_002985663.1 242237482 8087443 complement(26896..28293) 1 NC_012880.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: swp:swp_0839 site-specific DNA-methyltransferase; DNA-cytosine methyltransferase 28293 8087443 Dd703_0022 Dickeya dadantii Ech703 DNA-cytosine methyltransferase YP_002985663.1 26896 R 579405 CDS YP_002985664.1 242237483 8087444 28702..28872 1 NC_012880.1 hypothetical protein 28872 8087444 Dd703_0023 Dickeya dadantii Ech703 hypothetical protein YP_002985664.1 28702 D 579405 CDS YP_002985665.1 242237484 8087445 29573..30541 1 NC_012880.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 30541 glk 8087445 glk Dickeya dadantii Ech703 glucokinase YP_002985665.1 29573 D 579405 CDS YP_002985666.1 242237485 8087446 complement(30639..32123) 1 NC_012880.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: kpe:KPK_4014 GntR family transcriptional regulator; GntR family transcriptional regulator 32123 8087446 Dd703_0025 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002985666.1 30639 R 579405 CDS YP_002985667.1 242237486 8087447 complement(32524..33639) 1 NC_012880.1 TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: eca:ECA0070 hypothetical protein; peroxidase-like protein 33639 8087447 Dd703_0026 Dickeya dadantii Ech703 peroxidase-like protein YP_002985667.1 32524 R 579405 CDS YP_002985668.1 242237487 8087448 complement(33636..34673) 1 NC_012880.1 PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA0071 monooxygenase; luciferase-like monooxygenase 34673 8087448 Dd703_0027 Dickeya dadantii Ech703 luciferase-like monooxygenase YP_002985668.1 33636 R 579405 CDS YP_002985669.1 242237488 8087449 complement(34700..36340) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA0072 ABC transporter ATP-binding protein; ABC transporter 36340 8087449 Dd703_0028 Dickeya dadantii Ech703 ABC transporter YP_002985669.1 34700 R 579405 CDS YP_002985670.1 242237489 8087450 complement(36343..37197) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0073 ABC transporter permease; binding-protein-dependent transporters inner membrane component 37197 8087450 Dd703_0029 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985670.1 36343 R 579405 CDS YP_002985671.1 242237490 8087451 complement(37200..38135) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0074 ABC transporter permease; binding-protein-dependent transporters inner membrane component 38135 8087451 Dd703_0030 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985671.1 37200 R 579405 CDS YP_002985672.1 242237491 8087452 complement(38315..39958) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0075 ABC-type transporter substrate binding protein; family 5 extracellular solute-binding protein 39958 8087452 Dd703_0031 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002985672.1 38315 R 579405 CDS YP_002985673.1 242237492 8087453 40345..41370 1 NC_012880.1 KEGG: spc:Sputcn32_3988 cytoplasmic protein; hypothetical protein 41370 8087453 Dd703_0032 Dickeya dadantii Ech703 hypothetical protein YP_002985673.1 40345 D 579405 CDS YP_002985674.1 242237493 8087454 complement(41602..42366) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: psa:PST_4121 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 42366 8087454 Dd703_0033 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002985674.1 41602 R 579405 CDS YP_002985675.1 242237494 8087455 42667..43992 1 NC_012880.1 PFAM: aminotransferase class-III; KEGG: kpn:KPN_00577 hypothetical protein; hypothetical protein 43992 8087455 Dd703_0034 Dickeya dadantii Ech703 hypothetical protein YP_002985675.1 42667 D 579405 CDS YP_002985676.1 242237495 8087456 44318..45154 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rlt:Rleg2_3040 ABC transporter; ABC transporter 45154 8087456 Dd703_0035 Dickeya dadantii Ech703 ABC transporter YP_002985676.1 44318 D 579405 CDS YP_002985677.1 242237496 8087457 45144..46022 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smd:Smed_2371 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 46022 8087457 Dd703_0036 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985677.1 45144 D 579405 CDS YP_002985678.1 242237497 8087458 46023..47111 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rru:Rru_A3455 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transporters inner membrane component 47111 8087458 Dd703_0037 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985678.1 46023 D 579405 CDS YP_002985679.1 242237498 8087459 47251..48261 1 NC_012880.1 PFAM: NMT1/THI5 like domain protein; KEGG: avi:Avi_3461 ABC transporter substrate-binding protein (nitrate/sulfonate/taurine/bicarbonate); NMT1/THI5 like domain-containing protein 48261 8087459 Dd703_0038 Dickeya dadantii Ech703 NMT1/THI5 like domain-containing protein YP_002985679.1 47251 D 579405 CDS YP_002985680.1 242237499 8087460 48304..48990 1 NC_012880.1 PFAM: Tetracycline transcriptional regulator YcdC domain protein; regulatory protein TetR; KEGG: pna:Pnap_4037 TetR family transcriptional regulator; TetR family transcriptional regulator 48990 8087460 Dd703_0039 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002985680.1 48304 D 579405 CDS YP_002985681.1 242237500 8087461 49032..49838 1 NC_012880.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dac:Daci_3066 AraC family transcriptional regulator; AraC family transcriptional regulator 49838 8087461 Dd703_0040 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002985681.1 49032 D 579405 CDS YP_002985682.1 242237501 8087462 50045..50656 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: rpc:RPC_2485 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 50656 8087462 Dd703_0041 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002985682.1 50045 D 579405 CDS YP_002985683.1 242237502 8087463 complement(50676..51950) 1 NC_012880.1 PFAM: ferric reductase domain protein transmembrane component domain; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; KEGG: dar:Daro_2745 oxidoreductase FAD-binding region; ferric reductase domain-containing transmembrane protein 51950 8087463 Dd703_0042 Dickeya dadantii Ech703 ferric reductase domain-containing transmembrane protein YP_002985683.1 50676 R 579405 CDS YP_002985684.1 242237503 8087464 52958..53062 1 NC_012880.1 hypothetical protein 53062 8087464 Dd703_0043 Dickeya dadantii Ech703 hypothetical protein YP_002985684.1 52958 D 579405 CDS YP_002985685.1 242237504 8087465 53059..54477 1 NC_012880.1 glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 54477 gltD 8087465 gltD Dickeya dadantii Ech703 glutamate synthase subunit beta YP_002985685.1 53059 D 579405 CDS YP_002985686.1 242237505 8087466 54470..55783 1 NC_012880.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 55783 8087466 Dd703_0045 Dickeya dadantii Ech703 dihydropyrimidine dehydrogenase YP_002985686.1 54470 D 579405 CDS YP_002985687.1 242237506 8087467 55825..57270 1 NC_012880.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 57270 8087467 Dd703_0046 Dickeya dadantii Ech703 phenylhydantoinase YP_002985687.1 55825 D 579405 CDS YP_002985688.1 242237507 8087468 57352..58638 1 NC_012880.1 KEGG: pna:Pnap_4022 amidase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 58638 8087468 Dd703_0047 Dickeya dadantii Ech703 amidase YP_002985688.1 57352 D 579405 CDS YP_002985689.1 242237508 8087469 complement(58821..59138) 1 NC_012880.1 PFAM: NIPSNAP family containing protein; NIPSNAP family containing protein 59138 8087469 Dd703_0048 Dickeya dadantii Ech703 NIPSNAP family containing protein YP_002985689.1 58821 R 579405 CDS YP_002985690.1 242237509 8087470 59473..60525 1 NC_012880.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bsu:BSU06240 hypothetical protein; alcohol dehydrogenase zinc-binding domain-containing protein 60525 8087470 Dd703_0049 Dickeya dadantii Ech703 alcohol dehydrogenase zinc-binding domain-containing protein YP_002985690.1 59473 D 579405 CDS YP_002985691.1 242237510 8087471 complement(60637..61890) 1 NC_012880.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 61890 avtA 8087471 avtA Dickeya dadantii Ech703 valine--pyruvate transaminase YP_002985691.1 60637 R 579405 CDS YP_002985692.1 242237511 8087472 61991..62152 1 NC_012880.1 hypothetical protein 62152 8087472 Dd703_0051 Dickeya dadantii Ech703 hypothetical protein YP_002985692.1 61991 D 579405 CDS YP_002985693.1 242237512 8087473 62286..63494 1 NC_012880.1 KEGG: eca:ECA4385 hypothetical protein; hypothetical protein 63494 8087473 Dd703_0052 Dickeya dadantii Ech703 hypothetical protein YP_002985693.1 62286 D 579405 CDS YP_002985694.1 242237513 8087474 complement(63722..64246) 1 NC_012880.1 KEGG: pcr:Pcryo_1617 hypothetical protein; hypothetical protein 64246 8087474 Dd703_0053 Dickeya dadantii Ech703 hypothetical protein YP_002985694.1 63722 R 579405 CDS YP_002985695.1 242237514 8087475 complement(64258..65481) 1 NC_012880.1 KEGG: mmw:Mmwyl1_3852 abortive infection protein; abortive infection protein 65481 8087475 Dd703_0054 Dickeya dadantii Ech703 abortive infection protein YP_002985695.1 64258 R 579405 CDS YP_002985696.1 242237515 8087476 complement(65850..66815) 1 NC_012880.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: eca:ECA0078 2-hydroxyacid dehydrogenase; gluconate 2-dehydrogenase 66815 8087476 Dd703_0055 Dickeya dadantii Ech703 gluconate 2-dehydrogenase YP_002985696.1 65850 R 579405 CDS YP_002985697.1 242237516 8087477 67055..67303 1 NC_012880.1 PFAM: protein of unknown function DUF1471; KEGG: plu:plu4502 hypothetical protein; hypothetical protein 67303 8087477 Dd703_0056 Dickeya dadantii Ech703 hypothetical protein YP_002985697.1 67055 D 579405 CDS YP_002985698.1 242237517 8087478 complement(67363..67812) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0081 hypothetical protein; N-acetyltransferase GCN5 67812 8087478 Dd703_0057 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002985698.1 67363 R 579405 CDS YP_002985699.1 242237518 8087479 complement(67809..68447) 1 NC_012880.1 KEGG: eca:ECA0082 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 68447 8087479 Dd703_0058 Dickeya dadantii Ech703 DNA-3-methyladenine glycosylase I YP_002985699.1 67809 R 579405 CDS YP_002985700.1 242237519 8087480 68575..69381 1 NC_012880.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA0083 hypothetical protein; hypothetical protein 69381 8087480 Dd703_0059 Dickeya dadantii Ech703 hypothetical protein YP_002985700.1 68575 D 579405 CDS YP_002985701.1 242237520 8087481 69529..70443 1 NC_012880.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 70443 glyQ 8087481 glyQ Dickeya dadantii Ech703 glycyl-tRNA synthetase subunit alpha YP_002985701.1 69529 D 579405 CDS YP_002985702.1 242237521 8087482 70453..72522 1 NC_012880.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 72522 glyS 8087482 glyS Dickeya dadantii Ech703 glycyl-tRNA synthetase subunit beta YP_002985702.1 70453 D 579405 CDS YP_002985703.1 242237522 8087483 complement(72706..73713) 1 NC_012880.1 KEGG: par:Psyc_1209 hypothetical protein; hypothetical protein 73713 8087483 Dd703_0062 Dickeya dadantii Ech703 hypothetical protein YP_002985703.1 72706 R 579405 CDS YP_002985704.1 242237523 8087484 complement(73881..74975) 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: avi:Avi_5760 ABC transporter nucleotide binding/ATPase protein (sugar); ABC transporter 74975 8087484 Dd703_0063 Dickeya dadantii Ech703 ABC transporter YP_002985704.1 73881 R 579405 CDS YP_002985705.1 242237524 8087485 complement(75338..76537) 1 NC_012880.1 PFAM: ROK family protein; KEGG: avi:Avi_5412 transcriptional regulator ROK family; ROK family protein 76537 8087485 Dd703_0064 Dickeya dadantii Ech703 ROK family protein YP_002985705.1 75338 R 579405 CDS YP_002985706.1 242237525 8087486 76787..77908 1 NC_012880.1 PFAM: ROK family protein; KEGG: avi:Avi_5514 transcriptional regulator ROK family; ROK family protein 77908 8087486 Dd703_0065 Dickeya dadantii Ech703 ROK family protein YP_002985706.1 76787 D 579405 CDS YP_002985707.1 242237526 8087487 77905..79659 1 NC_012880.1 KEGG: avi:Avi_5513 hypothetical protein; hypothetical protein 79659 8087487 Dd703_0066 Dickeya dadantii Ech703 hypothetical protein YP_002985707.1 77905 D 579405 CDS YP_002985708.1 242237527 8087488 79714..80958 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO4396 sugar ABC transporter periplasmic protein; family 1 extracellular solute-binding protein 80958 8087488 Dd703_0067 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002985708.1 79714 D 579405 CDS YP_002985709.1 242237528 8087489 80955..81902 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rle:pRL120557 transmembrane permease transporter component; binding-protein-dependent transporters inner membrane component 81902 8087489 Dd703_0068 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985709.1 80955 D 579405 CDS YP_002985710.1 242237529 8087490 81899..82717 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: xca:xccb100_1976 permease of a sugar import ABC transporter; binding-protein-dependent transporters inner membrane component 82717 8087490 Dd703_0069 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985710.1 81899 D 579405 CDS YP_002985711.1 242237530 8087491 83208..83918 1 NC_012880.1 KEGG: eca:ECA0086 hypothetical protein; hypothetical protein 83918 8087491 Dd703_0070 Dickeya dadantii Ech703 hypothetical protein YP_002985711.1 83208 D 579405 CDS YP_002985712.1 242237531 8087492 complement(84020..85912) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0091 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 85912 8087492 Dd703_0071 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002985712.1 84020 R 579405 CDS YP_002985713.1 242237532 8087493 complement(86505..87131) 1 NC_012880.1 PFAM: manganese and iron superoxide dismutase; KEGG: ent:Ent638_4063 superoxide dismutase; superoxide dismutase 87131 8087493 Dd703_0072 Dickeya dadantii Ech703 superoxide dismutase YP_002985713.1 86505 R 579405 CDS YP_002985714.1 242237533 8087494 complement(87335..88168) 1 NC_012880.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 88168 8087494 Dd703_0073 Dickeya dadantii Ech703 formate dehydrogenase accessory protein YP_002985714.1 87335 R 579405 CDS YP_002985715.1 242237534 8087495 88530..90068 1 NC_012880.1 PFAM: aldehyde dehydrogenase; KEGG: eca:ECA0094 aldehyde dehydrogenase B; aldehyde dehydrogenase 90068 8087495 Dd703_0074 Dickeya dadantii Ech703 aldehyde dehydrogenase YP_002985715.1 88530 D 579405 CDS YP_002985716.1 242237535 8087496 complement(90118..91041) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spe:Spro_0094 AraC family transcriptional regulator; AraC family transcriptional regulator 91041 8087496 Dd703_0075 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002985716.1 90118 R 579405 CDS YP_002985717.1 242237536 8087497 complement(91121..91669) 1 NC_012880.1 PFAM: isochorismatase hydrolase; KEGG: spe:Spro_0095 isochorismatase hydrolase; isochorismatase hydrolase 91669 8087497 Dd703_0076 Dickeya dadantii Ech703 isochorismatase hydrolase YP_002985717.1 91121 R 579405 CDS YP_002985718.1 242237537 8087498 complement(91802..93262) 1 NC_012880.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: eca:ECA0096 xylulose kinase; xylulokinase 93262 8087498 Dd703_0077 Dickeya dadantii Ech703 xylulokinase YP_002985718.1 91802 R 579405 CDS YP_002985719.1 242237538 8087499 complement(93337..94656) 1 NC_012880.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 94656 8087499 Dd703_0078 Dickeya dadantii Ech703 xylose isomerase YP_002985719.1 93337 R 579405 CDS YP_002985720.1 242237539 8087500 95013..96011 1 NC_012880.1 periplasmic substrate-binding component of the ATP-dependent xylose transporter; high affinity; D-xylose transporter subunit XylF 96011 xylF 8087500 xylF Dickeya dadantii Ech703 D-xylose transporter subunit XylF YP_002985720.1 95013 D 579405 CDS YP_002985721.1 242237540 8087501 96094..97635 1 NC_012880.1 with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 97635 8087501 Dd703_0080 Dickeya dadantii Ech703 xylose transporter ATP-binding subunit YP_002985721.1 96094 D 579405 CDS YP_002985722.1 242237541 8087502 97613..98785 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: eca:ECA0100 xylose transporter permease; inner-membrane translocator 98785 8087502 Dd703_0081 Dickeya dadantii Ech703 inner-membrane translocator YP_002985722.1 97613 D 579405 CDS YP_002985723.1 242237542 8087503 98921..100108 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA0101 xylose operon regulatory protein; AraC family transcriptional regulator 100108 8087503 Dd703_0082 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002985723.1 98921 D 579405 CDS YP_002985724.1 242237543 8087504 complement(100179..100766) 1 NC_012880.1 PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA0102 hypothetical protein; ThiJ/PfpI domain-containing protein 100766 8087504 Dd703_0083 Dickeya dadantii Ech703 ThiJ/PfpI domain-containing protein YP_002985724.1 100179 R 579405 CDS YP_002985725.1 242237544 8087505 complement(100950..101228) 1 NC_012880.1 PFAM: protein of unknown function DUF156; KEGG: aha:AHA_0625 hypothetical protein; hypothetical protein 101228 8087505 Dd703_0084 Dickeya dadantii Ech703 hypothetical protein YP_002985725.1 100950 R 579405 CDS YP_002985726.1 242237545 8087506 101327..102442 1 NC_012880.1 PFAM: high-affinity nickel-transporter; KEGG: pmy:Pmen_2243 high-affinity nickel-transporter; high-affinity nickel-transporter 102442 8087506 Dd703_0085 Dickeya dadantii Ech703 high-affinity nickel-transporter YP_002985726.1 101327 D 579405 CDS YP_002985727.1 242237546 8087507 102770..104122 1 NC_012880.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 104122 8087507 Dd703_0086 Dickeya dadantii Ech703 argininosuccinate synthase YP_002985727.1 102770 D 579405 CDS YP_002985728.1 242237547 8087508 complement(104197..104697) 1 NC_012880.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: atc:AGR_C_466 hypothetical protein; MarR family transcriptional regulator 104697 8087508 Dd703_0087 Dickeya dadantii Ech703 MarR family transcriptional regulator YP_002985728.1 104197 R 579405 CDS YP_002985729.1 242237548 8087509 105005..105877 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ara:Arad_4435 transporter; hypothetical protein 105877 8087509 Dd703_0088 Dickeya dadantii Ech703 hypothetical protein YP_002985729.1 105005 D 579405 CDS YP_002985730.1 242237549 8087510 106261..107238 1 NC_012880.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0753 hypothetical protein; 3-oxoacyl-ACP synthase 107238 8087510 Dd703_0089 Dickeya dadantii Ech703 3-oxoacyl-ACP synthase YP_002985730.1 106261 D 579405 CDS YP_002985731.1 242237550 8087511 107251..107517 1 NC_012880.1 hypothetical protein 107517 8087511 Dd703_0090 Dickeya dadantii Ech703 hypothetical protein YP_002985731.1 107251 D 579405 CDS YP_002985732.1 242237551 8087512 107507..108118 1 NC_012880.1 hypothetical protein 108118 8087512 Dd703_0091 Dickeya dadantii Ech703 hypothetical protein YP_002985732.1 107507 D 579405 CDS YP_002985733.1 242237552 8087513 108139..109500 1 NC_012880.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: plu:plu0761 hypothetical protein; multi antimicrobial extrusion protein MatE 109500 8087513 Dd703_0092 Dickeya dadantii Ech703 multi antimicrobial extrusion protein MatE YP_002985733.1 108139 D 579405 CDS YP_002985734.1 242237553 8087514 109487..110488 1 NC_012880.1 KEGG: pfl:PFL_0267 hypothetical protein; hypothetical protein 110488 8087514 Dd703_0093 Dickeya dadantii Ech703 hypothetical protein YP_002985734.1 109487 D 579405 CDS YP_002985735.1 242237554 8087515 complement(110470..111027) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pde:Pden_1138 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 111027 8087515 Dd703_0094 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002985735.1 110470 R 579405 CDS YP_002985736.1 242237555 8087516 111476..112183 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cps:CPS_2119 ABC transporter ATP-binding protein; ABC transporter 112183 8087516 Dd703_0095 Dickeya dadantii Ech703 ABC transporter YP_002985736.1 111476 D 579405 CDS YP_002985737.1 242237556 8087517 112188..114629 1 NC_012880.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_2120 ABC transporter permease; hypothetical protein 114629 8087517 Dd703_0096 Dickeya dadantii Ech703 hypothetical protein YP_002985737.1 112188 D 579405 CDS YP_002985738.1 242237557 8087518 114948..116348 1 NC_012880.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: cps:CPS_2121 sigma-54 dependent DNA-binding response regulator; two component sigma-54 specific Fis family transcriptional regulator 116348 8087518 Dd703_0097 Dickeya dadantii Ech703 two component sigma-54 specific Fis family transcriptional regulator YP_002985738.1 114948 D 579405 CDS YP_002985739.1 242237558 8087519 116341..117660 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: cps:CPS_2122 sensor histidine kinase; histidine kinase 117660 8087519 Dd703_0098 Dickeya dadantii Ech703 histidine kinase YP_002985739.1 116341 D 579405 CDS YP_002985740.1 242237559 8087520 117617..118363 1 NC_012880.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: cbs:COXBURSA331_A0314 phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 118363 8087520 Dd703_0099 Dickeya dadantii Ech703 4'-phosphopantetheinyl transferase YP_002985740.1 117617 D 579405 CDS YP_002985741.1 242237560 8087521 complement(118424..119164) 1 NC_012880.1 KEGG: neu:NE1226 hypothetical protein; hypothetical protein 119164 8087521 Dd703_0100 Dickeya dadantii Ech703 hypothetical protein YP_002985741.1 118424 R 579405 CDS YP_002985742.1 242237561 8087522 complement(119398..120321) 1 NC_012880.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0753 hypothetical protein; 3-oxoacyl-ACP synthase 120321 8087522 Dd703_0101 Dickeya dadantii Ech703 3-oxoacyl-ACP synthase YP_002985742.1 119398 R 579405 CDS YP_002985743.1 242237562 8087523 complement(120326..121162) 1 NC_012880.1 hypothetical protein 121162 8087523 Dd703_0102 Dickeya dadantii Ech703 hypothetical protein YP_002985743.1 120326 R 579405 CDS YP_002985744.1 242237563 8087524 complement(121146..122282) 1 NC_012880.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: plu:plu0762 hypothetical protein; acyl-CoA dehydrogenase domain-containing protein 122282 8087524 Dd703_0103 Dickeya dadantii Ech703 acyl-CoA dehydrogenase domain-containing protein YP_002985744.1 121146 R 579405 CDS YP_002985745.1 242237564 8087525 complement(122330..123307) 1 NC_012880.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0757 hypothetical protein; 3-oxoacyl-ACP synthase 123307 8087525 Dd703_0104 Dickeya dadantii Ech703 3-oxoacyl-ACP synthase YP_002985745.1 122330 R 579405 CDS YP_002985746.1 242237565 8087526 complement(123358..123876) 1 NC_012880.1 hypothetical protein 123876 8087526 Dd703_0105 Dickeya dadantii Ech703 hypothetical protein YP_002985746.1 123358 R 579405 CDS YP_002985747.1 242237566 8087527 complement(123882..125012) 1 NC_012880.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: plu:plu0762 hypothetical protein; acyl-CoA dehydrogenase domain-containing protein 125012 8087527 Dd703_0106 Dickeya dadantii Ech703 acyl-CoA dehydrogenase domain-containing protein YP_002985747.1 123882 R 579405 CDS YP_002985748.1 242237567 8087528 complement(125009..125440) 1 NC_012880.1 KEGG: mes:Meso_1038 methylmalonyl-CoA epimerase; hypothetical protein 125440 8087528 Dd703_0107 Dickeya dadantii Ech703 hypothetical protein YP_002985748.1 125009 R 579405 CDS YP_002985749.1 242237568 8087529 complement(125497..127017) 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: baa:BA_1915 AMP-binding enzyme; AMP-dependent synthetase and ligase 127017 8087529 Dd703_0108 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002985749.1 125497 R 579405 CDS YP_002985750.1 242237569 8087530 complement(126998..128548) 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bsu:BSU38500 D-alanine--D-alanyl carrier protein ligase; AMP-dependent synthetase and ligase 128548 8087530 Dd703_0109 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002985750.1 126998 R 579405 CDS YP_002985751.1 242237570 8087531 complement(128539..128811) 1 NC_012880.1 hypothetical protein 128811 8087531 Dd703_0110 Dickeya dadantii Ech703 hypothetical protein YP_002985751.1 128539 R 579405 CDS YP_002985752.1 242237571 8087532 complement(128817..130397) 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mll6742 long chain acyl-CoA synthetase; AMP-dependent synthetase and ligase 130397 8087532 Dd703_0111 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002985752.1 128817 R 579405 CDS YP_002985753.1 242237572 8087533 complement(130407..131324) 1 NC_012880.1 KEGG: plu:plu0764 hypothetical protein; hypothetical protein 131324 8087533 Dd703_0112 Dickeya dadantii Ech703 hypothetical protein YP_002985753.1 130407 R 579405 CDS YP_002985754.1 242237573 8087534 complement(131321..132649) 1 NC_012880.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mpo:Mpop_3620 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 132649 8087534 Dd703_0113 Dickeya dadantii Ech703 Orn/DAP/Arg decarboxylase 2 YP_002985754.1 131321 R 579405 CDS YP_002985755.1 242237574 8087535 complement(132642..132950) 1 NC_012880.1 hypothetical protein 132950 8087535 Dd703_0114 Dickeya dadantii Ech703 hypothetical protein YP_002985755.1 132642 R 579405 CDS YP_002985756.1 242237575 8087536 complement(133173..133820) 1 NC_012880.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase 133820 ulaD 8087536 ulaD Dickeya dadantii Ech703 3-keto-L-gulonate-6-phosphate decarboxylase YP_002985756.1 133173 R 579405 CDS YP_002985757.1 242237576 8087537 complement(134212..134904) 1 NC_012880.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 134904 araD 8087537 araD Dickeya dadantii Ech703 L-ribulose-5-phosphate 4-epimerase YP_002985757.1 134212 R 579405 CDS YP_002985758.1 242237577 8087538 complement(134962..135438) 1 NC_012880.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ppr:PBPRB0274 phosphotransferase system mannitol/fructose-specific IIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 135438 8087538 Dd703_0117 Dickeya dadantii Ech703 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_002985758.1 134962 R 579405 CDS YP_002985759.1 242237578 8087539 complement(135508..137271) 1 NC_012880.1 PFAM: sugar-specific permease SgaT/UlaA; phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: ppr:PBPRB0273 ascorbate-specific PTS system enzyme IIC/IIB; PTS system ascorbate-specific transporter subunits IICB 137271 8087539 Dd703_0118 Dickeya dadantii Ech703 PTS system ascorbate-specific transporter subunits IICB YP_002985759.1 135508 R 579405 CDS YP_002985760.1 242237579 8087540 137757..138824 1 NC_012880.1 KEGG: ppr:PBPRB0271 L-ascorbate 6-phosphate lactonase; L-ascorbate 6-phosphate lactonase 138824 8087540 Dd703_0119 Dickeya dadantii Ech703 L-ascorbate 6-phosphate lactonase YP_002985760.1 137757 D 579405 CDS YP_002985761.1 242237580 8087541 138901..139725 1 NC_012880.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: ppr:PBPRB0270 hypothetical protein; cof family hydrolase 139725 8087541 Dd703_0120 Dickeya dadantii Ech703 cof family hydrolase YP_002985761.1 138901 D 579405 CDS YP_002985762.1 242237581 8087542 139765..140637 1 NC_012880.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; L-xylulose 5-phosphate 3-epimerase 140637 8087542 Dd703_0121 Dickeya dadantii Ech703 L-xylulose 5-phosphate 3-epimerase YP_002985762.1 139765 D 579405 CDS YP_002985763.1 242237582 8087543 140737..141492 1 NC_012880.1 negative regulator of ulaG and ulaABCDEF; transcriptional repressor UlaR 141492 8087543 Dd703_0122 Dickeya dadantii Ech703 transcriptional repressor UlaR YP_002985763.1 140737 D 579405 CDS YP_002985764.1 242237583 8087544 141641..142321 1 NC_012880.1 KEGG: swd:Swoo_4575 amino acid adenylation; amino acid adenylation 142321 8087544 Dd703_0123 Dickeya dadantii Ech703 amino acid adenylation YP_002985764.1 141641 D 579405 CDS YP_002985765.1 242237584 8087545 complement(142438..144480) 1 NC_012880.1 KEGG: pfo:Pfl01_1382 hypothetical protein; hypothetical protein 144480 8087545 Dd703_0124 Dickeya dadantii Ech703 hypothetical protein YP_002985765.1 142438 R 579405 CDS YP_002985766.1 242237585 8087546 complement(144554..145513) 1 NC_012880.1 PFAM: glycosyl transferase family 2; KEGG: sea:SeAg_B4458 bactoprenol glucosyl transferase; family 2 glycosyl transferase 145513 8087546 Dd703_0125 Dickeya dadantii Ech703 family 2 glycosyl transferase YP_002985766.1 144554 R 579405 CDS YP_002985767.1 242237586 8087547 complement(145783..146142) 1 NC_012880.1 PFAM: GtrA family protein; KEGG: sfv:SFV_0258 bactoprenol-linked glucose translocase; GtrA family protein 146142 8087547 Dd703_0126 Dickeya dadantii Ech703 GtrA family protein YP_002985767.1 145783 R 579405 CDS YP_002985768.1 242237587 8087548 146864..147574 1 NC_012880.1 PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: eca:ECA1561 quorum-sensing transcriptional regulator; LuxR family transcriptional regulator 147574 8087548 Dd703_0127 Dickeya dadantii Ech703 LuxR family transcriptional regulator YP_002985768.1 146864 D 579405 CDS YP_002985769.1 242237588 8087549 147615..148295 1 NC_012880.1 KEGG: shm:Shewmr7_1780 hypothetical protein; hypothetical protein 148295 8087549 Dd703_0128 Dickeya dadantii Ech703 hypothetical protein YP_002985769.1 147615 D 579405 CDS YP_002985770.1 242237589 8087550 complement(148332..149381) 1 NC_012880.1 PFAM: aminoglycoside phosphotransferase; KEGG: mxa:MXAN_2524 homoserine kinase; aminoglycoside phosphotransferase 149381 8087550 Dd703_0129 Dickeya dadantii Ech703 aminoglycoside phosphotransferase YP_002985770.1 148332 R 579405 CDS YP_002985771.1 242237590 8087551 complement(149550..149849) 1 NC_012880.1 hypothetical protein 149849 8087551 Dd703_0130 Dickeya dadantii Ech703 hypothetical protein YP_002985771.1 149550 R 579405 CDS YP_002985772.1 242237591 8087552 complement(149849..150712) 1 NC_012880.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: yps:YPTB0040 hypothetical protein; hypothetical protein 150712 8087552 Dd703_0131 Dickeya dadantii Ech703 hypothetical protein YP_002985772.1 149849 R 579405 CDS YP_002985773.1 242237592 8087553 complement(150937..151407) 1 NC_012880.1 KEGG: kpe:KPK_4062 hypothetical protein; hypothetical protein 151407 8087553 Dd703_0132 Dickeya dadantii Ech703 hypothetical protein YP_002985773.1 150937 R 579405 CDS YP_002985774.1 242237593 8087554 complement(151594..152502) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0131 LysR family transcriptional regulator; LysR family transcriptional regulator 152502 8087554 Dd703_0133 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002985774.1 151594 R 579405 CDS YP_002985775.1 242237594 8087555 complement(152670..153737) 1 NC_012880.1 PFAM: peptidase M19 renal dipeptidase; KEGG: atc:AGR_C_4575 membrane dipeptidase homolog; membrane dipeptidase 153737 8087555 Dd703_0134 Dickeya dadantii Ech703 membrane dipeptidase YP_002985775.1 152670 R 579405 CDS YP_002985776.1 242237595 8087556 153948..155543 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: oan:Oant_3741 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 155543 8087556 Dd703_0135 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002985776.1 153948 D 579405 CDS YP_002985777.1 242237596 8087557 155543..156553 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oan:Oant_3740 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 156553 8087557 Dd703_0136 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985777.1 155543 D 579405 CDS YP_002985778.1 242237597 8087558 156550..157452 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oan:Oant_3739 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 157452 8087558 Dd703_0137 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985778.1 156550 D 579405 CDS YP_002985779.1 242237598 8087559 157453..158283 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: atc:AGR_C_4569 dipeptide transporter DppD homolog; ABC transporter 158283 8087559 Dd703_0138 Dickeya dadantii Ech703 ABC transporter YP_002985779.1 157453 D 579405 CDS YP_002985780.1 242237599 8087560 158280..159020 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: oan:Oant_3737 ABC transporter; ABC transporter 159020 8087560 Dd703_0139 Dickeya dadantii Ech703 ABC transporter YP_002985780.1 158280 D 579405 CDS YP_002985781.1 242237600 8087561 159017..160528 1 NC_012880.1 PFAM: beta-lactamase; KEGG: spe:Spro_2075 beta-lactamase; beta-lactamase 160528 8087561 Dd703_0140 Dickeya dadantii Ech703 beta-lactamase YP_002985781.1 159017 D 579405 CDS YP_002985782.1 242237601 8087562 complement(160651..161610) 1 NC_012880.1 PFAM: peptidase T2 asparaginase 2; KEGG: eca:ECA0132 L-asparaginase; peptidase T2 asparaginase 2 161610 8087562 Dd703_0141 Dickeya dadantii Ech703 peptidase T2 asparaginase 2 YP_002985782.1 160651 R 579405 CDS YP_002985783.1 242237602 8087563 complement(161638..162459) 1 NC_012880.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: eca:ECA0133 hypothetical protein; peptidase M55 D-aminopeptidase 162459 8087563 Dd703_0142 Dickeya dadantii Ech703 peptidase M55 D-aminopeptidase YP_002985783.1 161638 R 579405 CDS YP_002985784.1 242237603 8087564 complement(162470..163528) 1 NC_012880.1 PFAM: peptidase S58 DmpA; KEGG: eca:ECA0134 peptidase; peptidase S58 DmpA 163528 8087564 Dd703_0143 Dickeya dadantii Ech703 peptidase S58 DmpA YP_002985784.1 162470 R 579405 CDS YP_002985785.1 242237604 8087565 complement(163654..164550) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0135 ABC transporter permease; binding-protein-dependent transporters inner membrane component 164550 8087565 Dd703_0144 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985785.1 163654 R 579405 CDS YP_002985786.1 242237605 8087566 complement(164559..165479) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0136 ABC transporter permease; binding-protein-dependent transporters inner membrane component 165479 8087566 Dd703_0145 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985786.1 164559 R 579405 CDS YP_002985787.1 242237606 8087567 complement(165497..167038) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0137 ABC transporter periplasmic protein; family 5 extracellular solute-binding protein 167038 8087567 Dd703_0146 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002985787.1 165497 R 579405 CDS YP_002985788.1 242237607 8087568 complement(167099..168973) 1 NC_012880.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: eca:ECA0138 ABC transporter ATP-binding protein; ABC transporter 168973 8087568 Dd703_0147 Dickeya dadantii Ech703 ABC transporter YP_002985788.1 167099 R 579405 CDS YP_002985789.1 242237608 8087569 complement(168994..169959) 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0139 mandelate racemase / muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein 169959 8087569 Dd703_0148 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002985789.1 168994 R 579405 CDS YP_002985790.1 242237609 8087570 complement(169964..170971) 1 NC_012880.1 PFAM: protein of unknown function DUF1611; KEGG: ppr:PBPRA1897 hypothetical protein; hypothetical protein 170971 8087570 Dd703_0149 Dickeya dadantii Ech703 hypothetical protein YP_002985790.1 169964 R 579405 CDS YP_002985791.1 242237610 8087571 complement(171189..171506) 1 NC_012880.1 KEGG: eca:ECA3001 hypothetical protein; hypothetical protein 171506 8087571 Dd703_0150 Dickeya dadantii Ech703 hypothetical protein YP_002985791.1 171189 R 579405 CDS YP_002985792.1 242237611 8087572 complement(171517..171891) 1 NC_012880.1 PFAM: protein of unknown function DUF202; KEGG: eca:ECA3000 hypothetical protein; hypothetical protein 171891 8087572 Dd703_0151 Dickeya dadantii Ech703 hypothetical protein YP_002985792.1 171517 R 579405 CDS YP_002985793.1 242237612 8087574 173760..174476 1 NC_012880.1 KEGG: eca:ECA0140 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 174476 8087574 Dd703_0153 Dickeya dadantii Ech703 ribonuclease PH YP_002985793.1 173760 D 579405 CDS YP_002985794.1 242237613 8087575 174662..175303 1 NC_012880.1 KEGG: esa:ESA_04090 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 175303 8087575 Dd703_0154 Dickeya dadantii Ech703 orotate phosphoribosyltransferase YP_002985794.1 174662 D 579405 CDS YP_002985795.1 242237614 8087576 complement(175345..175941) 1 NC_012880.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 175941 slmA 8087576 slmA Dickeya dadantii Ech703 nucleoid occlusion protein YP_002985795.1 175345 R 579405 CDS YP_002985796.1 242237615 8087577 complement(176049..176507) 1 NC_012880.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: ent:Ent638_0099 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 176507 8087577 Dd703_0156 Dickeya dadantii Ech703 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_002985796.1 176049 R 579405 CDS YP_002985797.1 242237616 8087578 complement(176491..177726) 1 NC_012880.1 KEGG: eca:ECA0144 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 177726 8087578 Dd703_0157 Dickeya dadantii Ech703 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_002985797.1 176491 R 579405 CDS YP_002985798.1 242237617 8087579 complement(177887..178372) 1 NC_012880.1 KEGG: swi:Swit_3729 hypothetical protein; hypothetical protein 178372 8087579 Dd703_0158 Dickeya dadantii Ech703 hypothetical protein YP_002985798.1 177887 R 579405 CDS YP_002985799.1 242237618 8087580 178581..179246 1 NC_012880.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 179246 radC 8087580 radC Dickeya dadantii Ech703 DNA repair protein RadC YP_002985799.1 178581 D 579405 CDS YP_002985800.1 242237619 8087581 179485..179721 1 NC_012880.1 required for 70S ribosome assembly; 50S ribosomal protein L28 179721 rpmB 8087581 rpmB Dickeya dadantii Ech703 50S ribosomal protein L28 YP_002985800.1 179485 D 579405 CDS YP_002985801.1 242237620 8087582 179733..179900 1 NC_012880.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: yen:YE0065 50S ribosomal protein L33; 50S ribosomal protein L33 179900 8087582 Dd703_0161 Dickeya dadantii Ech703 50S ribosomal protein L33 YP_002985801.1 179733 D 579405 CDS YP_002985802.1 242237621 8087583 179976..180785 1 NC_012880.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 180785 8087583 Dd703_0162 Dickeya dadantii Ech703 formamidopyrimidine-DNA glycosylase YP_002985802.1 179976 D 579405 CDS YP_002985803.1 242237622 8087584 complement(181026..181505) 1 NC_012880.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 181505 coaD 8087584 coaD Dickeya dadantii Ech703 phosphopantetheine adenylyltransferase YP_002985803.1 181026 R 579405 CDS YP_002985804.1 242237623 8088719 complement(181495..182286) 1 NC_012880.1 PFAM: glycosyl transferase family 2; KEGG: yps:YPTB0051 lipopolysaccharide core biosynthesis glycosyl transferase; family 2 glycosyl transferase 182286 8088719 Dd703_0164 Dickeya dadantii Ech703 family 2 glycosyl transferase YP_002985804.1 181495 R 579405 CDS YP_002985805.1 242237624 8088720 complement(182286..183569) 1 NC_012880.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 183569 8088720 Dd703_0165 Dickeya dadantii Ech703 3-deoxy-D-manno-octulosonic-acid transferase YP_002985805.1 182286 R 579405 CDS YP_002985806.1 242237625 8088721 184132..185256 1 NC_012880.1 PFAM: glycosyl transferase group 1; KEGG: plu:plu4862 WalR protein; group 1 glycosyl transferase 185256 8088721 Dd703_0166 Dickeya dadantii Ech703 group 1 glycosyl transferase YP_002985806.1 184132 D 579405 CDS YP_002985807.1 242237626 8088722 185257..186366 1 NC_012880.1 PFAM: glycosyl transferase family 9; KEGG: bma:BMA1910 heptosyltransferase family protein; glycosyl transferase family protein 186366 8088722 Dd703_0167 Dickeya dadantii Ech703 glycosyl transferase family protein YP_002985807.1 185257 D 579405 CDS YP_002985808.1 242237627 8088723 186363..187565 1 NC_012880.1 PFAM: O-antigen polymerase; KEGG: hch:HCH_01051 O-antigen polymerase; O-antigen polymerase 187565 8088723 Dd703_0168 Dickeya dadantii Ech703 O-antigen polymerase YP_002985808.1 186363 D 579405 CDS YP_002985809.1 242237628 8088724 complement(187707..188825) 1 NC_012880.1 PFAM: glycosyl transferase group 1; KEGG: eta:ETA_00760 glycosyl transferase, group 1; group 1 glycosyl transferase 188825 8088724 Dd703_0169 Dickeya dadantii Ech703 group 1 glycosyl transferase YP_002985809.1 187707 R 579405 CDS YP_002985810.1 242237629 8088725 complement(188822..189907) 1 NC_012880.1 TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; KEGG: dar:Daro_0152 lipopolysaccharide heptosyltransferase III; lipopolysaccharide heptosyltransferase III 189907 8088725 Dd703_0170 Dickeya dadantii Ech703 lipopolysaccharide heptosyltransferase III YP_002985810.1 188822 R 579405 CDS YP_002985811.1 242237630 8088726 complement(189920..190888) 1 NC_012880.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: eca:ECA0163 ADP-heptose:LPS heptosyl transferase I; ADP-heptose--LPS heptosyltransferase 190888 8088726 Dd703_0171 Dickeya dadantii Ech703 ADP-heptose--LPS heptosyltransferase YP_002985811.1 189920 R 579405 CDS YP_002985812.1 242237631 8088727 complement(190885..191937) 1 NC_012880.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase 191937 8088727 Dd703_0172 Dickeya dadantii Ech703 ADP-heptose--LPS heptosyltransferase YP_002985812.1 190885 R 579405 CDS YP_002985813.1 242237632 8088728 complement(191970..192902) 1 NC_012880.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase 192902 rfaD 8088728 rfaD Dickeya dadantii Ech703 ADP-L-glycero-D-manno-heptose-6-epimerase YP_002985813.1 191970 R 579405 CDS YP_002985814.1 242237633 8088729 193178..194374 1 NC_012880.1 KEGG: spe:Spro_4824 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; aminotransferase class-III; 2-amino-3-ketobutyrate coenzyme A ligase 194374 8088729 Dd703_0174 Dickeya dadantii Ech703 2-amino-3-ketobutyrate coenzyme A ligase YP_002985814.1 193178 D 579405 CDS YP_002985815.1 242237634 8088730 194386..195411 1 NC_012880.1 TIGRFAM: L-threonine 3-dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: pmr:PMI3178 L-threonine 3-dehydrogenase; L-threonine 3-dehydrogenase 195411 8088730 Dd703_0175 Dickeya dadantii Ech703 L-threonine 3-dehydrogenase YP_002985815.1 194386 D 579405 CDS YP_002985816.1 242237635 8088731 complement(195863..196822) 1 NC_012880.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: eca:ECA0169 hypothetical protein; hypothetical protein 196822 8088731 Dd703_0176 Dickeya dadantii Ech703 hypothetical protein YP_002985816.1 195863 R 579405 CDS YP_002985817.1 242237636 8088732 complement(196826..198100) 1 NC_012880.1 PFAM: peptidase M23; KEGG: eca:ECA0170 hypothetical protein; hypothetical protein 198100 8088732 Dd703_0177 Dickeya dadantii Ech703 hypothetical protein YP_002985817.1 196826 R 579405 CDS YP_002985818.1 242237637 8088733 198357..198788 1 NC_012880.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: eca:ECA0171 rhodanese-related sulfurtransferase; rhodanese 198788 8088733 Dd703_0178 Dickeya dadantii Ech703 rhodanese YP_002985818.1 198357 D 579405 CDS YP_002985819.1 242237638 8088734 199013..199489 1 NC_012880.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 199489 8088734 Dd703_0179 Dickeya dadantii Ech703 preprotein translocase subunit SecB YP_002985819.1 199013 D 579405 CDS YP_002985820.1 242237639 8088735 199489..200505 1 NC_012880.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 200505 gpsA 8088735 gpsA Dickeya dadantii Ech703 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002985820.1 199489 D 579405 CDS YP_002985821.1 242237640 8088736 200760..201581 1 NC_012880.1 catalyzes the O-acetylation of serine; serine acetyltransferase 201581 cysE 8088736 cysE Dickeya dadantii Ech703 serine acetyltransferase YP_002985821.1 200760 D 579405 CDS YP_002985822.1 242237641 8088737 202086..202586 1 NC_012880.1 PFAM: antimicrobial peptide resistance and lipid A acylation PagP; KEGG: eca:ECA0175 palmitoyl transferase for lipid A; antimicrobial peptide resistance and lipid A acylation PagP 202586 8088737 Dd703_0182 Dickeya dadantii Ech703 antimicrobial peptide resistance and lipid A acylation PagP YP_002985822.1 202086 D 579405 CDS YP_002985823.1 242237642 8088738 202688..203587 1 NC_012880.1 TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA0179 hypothetical protein; carboxylate/amino acid/amine transporter 203587 8088738 Dd703_0183 Dickeya dadantii Ech703 carboxylate/amino acid/amine transporter YP_002985823.1 202688 D 579405 CDS YP_002985824.1 242237643 8088739 complement(203490..204428) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0180 transcriptional activator protein; LysR family transcriptional regulator 204428 8088739 Dd703_0184 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002985824.1 203490 R 579405 CDS YP_002985825.1 242237644 8088740 204533..206800 1 NC_012880.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 206800 8088740 Dd703_0185 Dickeya dadantii Ech703 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_002985825.1 204533 D 579405 CDS YP_002985826.1 242237645 8088741 complement(206961..207788) 1 NC_012880.1 PFAM: dienelactone hydrolase; KEGG: spe:Spro_0243 carboxymethylenebutenolidase; carboxymethylenebutenolidase 207788 8088741 Dd703_0186 Dickeya dadantii Ech703 carboxymethylenebutenolidase YP_002985826.1 206961 R 579405 CDS YP_002985827.1 242237646 8088742 208079..208837 1 NC_012880.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 208837 8088742 Dd703_0187 Dickeya dadantii Ech703 uridine phosphorylase YP_002985827.1 208079 D 579405 CDS YP_002985828.1 242237647 8088743 208982..209764 1 NC_012880.1 KEGG: eca:ECA0186 hypothetical protein; protein tyrosine/serine phosphatase 209764 8088743 Dd703_0188 Dickeya dadantii Ech703 protein tyrosine/serine phosphatase YP_002985828.1 208982 D 579405 CDS YP_002985829.1 242237648 8088744 210228..210710 1 NC_012880.1 KEGG: rpa:RPA2267 hypothetical protein; hypothetical protein 210710 8088744 Dd703_0189 Dickeya dadantii Ech703 hypothetical protein YP_002985829.1 210228 D 579405 CDS YP_002985830.1 242237649 8088745 complement(210782..213424) 1 NC_012880.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 213424 8088745 Dd703_0190 Dickeya dadantii Ech703 phosphoenolpyruvate carboxylase YP_002985830.1 210782 R 579405 CDS YP_002985831.1 242237650 8088747 215424..216623 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0189 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 216623 8088747 Dd703_0192 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002985831.1 215424 D 579405 CDS YP_002985832.1 242237651 8088748 complement(216647..217375) 1 NC_012880.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0190 GntR family transcriptional regulator; GntR family transcriptional regulator 217375 8088748 Dd703_0193 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002985832.1 216647 R 579405 CDS YP_002985833.1 242237652 8088749 complement(217465..218613) 1 NC_012880.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 218613 8088749 Dd703_0194 Dickeya dadantii Ech703 acetylornithine deacetylase YP_002985833.1 217465 R 579405 CDS YP_002985834.1 242237653 8088750 218826..219830 1 NC_012880.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 219830 argC 8088750 argC Dickeya dadantii Ech703 N-acetyl-gamma-glutamyl-phosphate reductase YP_002985834.1 218826 D 579405 CDS YP_002985835.1 242237654 8088751 219856..220629 1 NC_012880.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 220629 8088751 Dd703_0196 Dickeya dadantii Ech703 acetylglutamate kinase YP_002985835.1 219856 D 579405 CDS YP_002985836.1 242237655 8088752 220742..222115 1 NC_012880.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 222115 8088752 Dd703_0197 Dickeya dadantii Ech703 argininosuccinate lyase YP_002985836.1 220742 D 579405 CDS YP_002985837.1 242237656 8088753 complement(222273..222554) 1 NC_012880.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eca:ECA4216 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 222554 8088753 Dd703_0198 Dickeya dadantii Ech703 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002985837.1 222273 R 579405 CDS YP_002985838.1 242237657 8088754 222727..224751 1 NC_012880.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 224751 8088754 Dd703_0199 Dickeya dadantii Ech703 ATP-dependent DNA helicase Rep YP_002985838.1 222727 D 579405 CDS YP_002985839.1 242237658 8088755 complement(224944..226761) 1 NC_012880.1 PFAM: glycoside hydrolase family 28; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: yen:YE0164 exo-poly-alpha-D-galacturonosidase precursor; glycoside hydrolase family protein 226761 8088755 Dd703_0200 Dickeya dadantii Ech703 glycoside hydrolase family protein YP_002985839.1 224944 R 579405 CDS YP_002985840.1 242237659 8088756 complement(226927..228423) 1 NC_012880.1 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase 228423 8088756 Dd703_0201 Dickeya dadantii Ech703 guanosine pentaphosphate phosphohydrolase YP_002985840.1 226927 R 579405 CDS YP_002985841.1 242237660 8088757 complement(228431..229717) 1 NC_012880.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 229717 8088757 Dd703_0202 Dickeya dadantii Ech703 ATP-dependent RNA helicase RhlB YP_002985841.1 228431 R 579405 CDS YP_002985842.1 242237661 8088758 229837..230163 1 NC_012880.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: spe:Spro_0159 thioredoxin; thioredoxin 230163 8088758 Dd703_0203 Dickeya dadantii Ech703 thioredoxin YP_002985842.1 229837 D 579405 CDS YP_002985843.1 242237662 8088759 230583..231842 1 NC_012880.1 KEGG: cko:CKO_00124 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; ribonuclease B OB region domain; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; ATPase AAA; transcription termination factor Rho 231842 8088759 Dd703_0204 Dickeya dadantii Ech703 transcription termination factor Rho YP_002985843.1 230583 D 579405 CDS YP_002985844.1 242237663 8088760 232325..233458 1 NC_012880.1 KEGG: yen:YE0171 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 233458 8088760 Dd703_0205 Dickeya dadantii Ech703 UDP-N-acetylglucosamine 2-epimerase YP_002985844.1 232325 D 579405 CDS YP_002985845.1 242237664 8088761 233455..234717 1 NC_012880.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: yps:YPTB0171 UDP-N-acetyl-D-mannosamine dehydrogenase; nucleotide sugar dehydrogenase 234717 8088761 Dd703_0206 Dickeya dadantii Ech703 nucleotide sugar dehydrogenase YP_002985845.1 233455 D 579405 CDS YP_002985846.1 242237665 8088762 234741..235463 1 NC_012880.1 TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA4205 TDP-fucosamine acetyltransferase; TDP-fucosamine acetyltransferase 235463 8088762 Dd703_0207 Dickeya dadantii Ech703 TDP-fucosamine acetyltransferase YP_002985846.1 234741 D 579405 CDS YP_002985847.1 242237666 8088763 235450..236577 1 NC_012880.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 236577 8088763 Dd703_0208 Dickeya dadantii Ech703 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_002985847.1 235450 D 579405 CDS YP_002985848.1 242237667 8088764 236577..237830 1 NC_012880.1 PFAM: polysaccharide biosynthesis protein; KEGG: eca:ECA4203 entero common antigen biosynthesis protein; polysaccharide biosynthesis protein 237830 8088764 Dd703_0209 Dickeya dadantii Ech703 polysaccharide biosynthesis protein YP_002985848.1 236577 D 579405 CDS YP_002985849.1 242237668 8088765 237827..238897 1 NC_012880.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 238897 8088765 Dd703_0210 Dickeya dadantii Ech703 4-alpha-L-fucosyltransferase YP_002985849.1 237827 D 579405 CDS YP_002985850.1 242237669 8088766 238894..240231 1 NC_012880.1 enterobacterial common antigen polymerase; common antigen polymerase 240231 8088766 Dd703_0211 Dickeya dadantii Ech703 common antigen polymerase YP_002985850.1 238894 D 579405 CDS YP_002985851.1 242237670 8088767 240237..240968 1 NC_012880.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: kpn:KPN_04295 UDP-N-acetyl-D-mannosaminuronic acid transferase; UDP-N-acetyl-D-mannosaminuronic acid transferase 240968 8088767 Dd703_0212 Dickeya dadantii Ech703 UDP-N-acetyl-D-mannosaminuronic acid transferase YP_002985851.1 240237 D 579405 CDS YP_002985852.1 242237671 8088768 241205..242599 1 NC_012880.1 uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; transporter YifK 242599 8088768 Dd703_0213 Dickeya dadantii Ech703 transporter YifK YP_002985852.1 241205 D 579405 CDS YP_002985853.1 242237672 8088773 243372..243710 1 NC_012880.1 KEGG: aha:AHA_0731 steroid delta-isomerase domain-containing protein; steroid delta-isomerase domain-containing protein 243710 8088773 Dd703_0214 Dickeya dadantii Ech703 steroid delta-isomerase domain-containing protein YP_002985853.1 243372 D 579405 CDS YP_002985854.1 242237673 8088774 243962..245326 1 NC_012880.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 245326 8088774 Dd703_0215 Dickeya dadantii Ech703 adenylosuccinate lyase YP_002985854.1 243962 D 579405 CDS YP_002985855.1 242237674 8088775 245338..245874 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA4196 acetyltransferase; N-acetyltransferase GCN5 245874 8088775 Dd703_0216 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002985855.1 245338 D 579405 CDS YP_002985856.1 242237675 8088776 245875..246642 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4195 amino-acid ABC transporter binding protein; family 3 extracellular solute-binding protein 246642 8088776 Dd703_0217 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002985856.1 245875 D 579405 CDS YP_002985857.1 242237676 8088777 246706..247377 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4194 amino-acid ABC transporter permease; polar amino acid ABC transporter permease 247377 8088777 Dd703_0218 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002985857.1 246706 D 579405 CDS YP_002985858.1 242237677 8088778 247387..248148 1 NC_012880.1 PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: eca:ECA4193 amino-acid ABC transporter ATP-binding protein; ABC transporter 248148 8088778 Dd703_0219 Dickeya dadantii Ech703 ABC transporter YP_002985858.1 247387 D 579405 CDS YP_002985859.1 242237678 8088779 248227..249384 1 NC_012880.1 KEGG: eca:ECA4192 peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 249384 8088779 Dd703_0220 Dickeya dadantii Ech703 amidohydrolase YP_002985859.1 248227 D 579405 CDS YP_002985860.1 242237679 8088780 250337..251368 1 NC_012880.1 NAD-binding; L-idonate 5-dehydrogenase 251368 8088780 Dd703_0221 Dickeya dadantii Ech703 L-idonate 5-dehydrogenase YP_002985860.1 250337 D 579405 CDS YP_002985861.1 242237680 8088781 251394..252158 1 NC_012880.1 Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 252158 8088781 Dd703_0222 Dickeya dadantii Ech703 gluconate 5-dehydrogenase YP_002985861.1 251394 D 579405 CDS YP_002985862.1 242237681 8088782 252251..253570 1 NC_012880.1 TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: stm:STM4482 L-idonate transport protein; gluconate transporter 253570 8088782 Dd703_0223 Dickeya dadantii Ech703 gluconate transporter YP_002985862.1 252251 D 579405 CDS YP_002985863.1 242237682 8088783 253638..254636 1 NC_012880.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: see:SNSL254_A4829 HTH-type transcriptional regulator IdnR; LacI family transcriptional regulator 254636 8088783 Dd703_0224 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002985863.1 253638 D 579405 CDS YP_002985864.1 242237683 8088784 complement(254842..256035) 1 NC_012880.1 TIGRFAM: HemY protein; PFAM: HemY domain protein; hypothetical protein; KEGG: eca:ECA4191 protoheme IX biogenesis protein; protoheme IX biogenesis protein 256035 8088784 Dd703_0225 Dickeya dadantii Ech703 protoheme IX biogenesis protein YP_002985864.1 254842 R 579405 CDS YP_002985865.1 242237684 8088785 complement(256038..257162) 1 NC_012880.1 PFAM: protein of unknown function DUF513 hemX; KEGG: eca:ECA4190 uroporphyrinogen III C-methyltransferase; uroporphyrinogen III C-methyltransferase 257162 8088785 Dd703_0226 Dickeya dadantii Ech703 uroporphyrinogen III C-methyltransferase YP_002985865.1 256038 R 579405 CDS YP_002985866.1 242237685 8088786 complement(257186..257926) 1 NC_012880.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 257926 hemD 8088786 hemD Dickeya dadantii Ech703 uroporphyrinogen-III synthase YP_002985866.1 257186 R 579405 CDS YP_002985867.1 242237686 8088787 complement(257923..258864) 1 NC_012880.1 KEGG: spe:Spro_0178 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase; porphobilinogen deaminase 258864 8088787 Dd703_0228 Dickeya dadantii Ech703 porphobilinogen deaminase YP_002985867.1 257923 R 579405 CDS YP_002985868.1 242237687 8088788 259192..261747 1 NC_012880.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 261747 cyaA 8088788 cyaA Dickeya dadantii Ech703 adenylate cyclase YP_002985868.1 259192 D 579405 CDS YP_002985869.1 242237688 8088789 complement(261790..262110) 1 NC_012880.1 TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: spe:Spro_0180 frataxin-like protein; iron donor protein CyaY 262110 8088789 Dd703_0230 Dickeya dadantii Ech703 iron donor protein CyaY YP_002985869.1 261790 R 579405 CDS YP_002985870.1 242237689 8088790 262188..262361 1 NC_012880.1 KEGG: ses:SARI_03711 hypothetical protein; hypothetical protein 262361 8088790 Dd703_0231 Dickeya dadantii Ech703 hypothetical protein YP_002985870.1 262188 D 579405 CDS YP_002985871.1 242237690 8088791 262456..263280 1 NC_012880.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 263280 dapF 8088791 dapF Dickeya dadantii Ech703 diaminopimelate epimerase YP_002985871.1 262456 D 579405 CDS YP_002985872.1 242237691 8088792 263277..263978 1 NC_012880.1 PFAM: protein of unknown function DUF484; KEGG: eca:ECA4182 hypothetical protein; hypothetical protein 263978 8088792 Dd703_0233 Dickeya dadantii Ech703 hypothetical protein YP_002985872.1 263277 D 579405 CDS YP_002985873.1 242237692 8088793 263975..264883 1 NC_012880.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 264883 xerC 8088793 xerC Dickeya dadantii Ech703 site-specific tyrosine recombinase XerC YP_002985873.1 263975 D 579405 CDS YP_002985874.1 242237693 8088794 264883..265599 1 NC_012880.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: eca:ECA4180 flavin mononucleotide phosphatase; HAD-superfamily hydrolase 265599 8088794 Dd703_0235 Dickeya dadantii Ech703 HAD-superfamily hydrolase YP_002985874.1 264883 D 579405 CDS YP_002985875.1 242237694 8088795 265686..267848 1 NC_012880.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 267848 uvrD 8088795 uvrD Dickeya dadantii Ech703 DNA-dependent helicase II YP_002985875.1 265686 D 579405 CDS YP_002985876.1 242237695 8088796 268230..269180 1 NC_012880.1 responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 269180 8088796 Dd703_0237 Dickeya dadantii Ech703 magnesium/nickel/cobalt transporter CorA YP_002985876.1 268230 D 579405 CDS YP_002985877.1 242237696 8088797 269382..270440 1 NC_012880.1 TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: eca:ECA4176 hypothetical protein; membrane protein AbrB 270440 8088797 Dd703_0238 Dickeya dadantii Ech703 membrane protein AbrB YP_002985877.1 269382 D 579405 CDS YP_002985878.1 242237697 8088798 complement(270399..271319) 1 NC_012880.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA4175 hypothetical protein; RarD protein, DMT superfamily transporter 271319 8088798 Dd703_0239 Dickeya dadantii Ech703 RarD protein, DMT superfamily transporter YP_002985878.1 270399 R 579405 CDS YP_002985879.1 242237698 8088799 complement(271394..271864) 1 NC_012880.1 PFAM: thioesterase superfamily protein; KEGG: eca:ECA4174 hypothetical protein; hypothetical protein 271864 8088799 Dd703_0240 Dickeya dadantii Ech703 hypothetical protein YP_002985879.1 271394 R 579405 CDS YP_002985880.1 242237699 8088476 272077..272946 1 NC_012880.1 catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 272946 8088476 Dd703_0241 Dickeya dadantii Ech703 phospholipase A YP_002985880.1 272077 D 579405 CDS YP_002985881.1 242237700 8088477 273050..274873 1 NC_012880.1 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ 274873 8088477 Dd703_0242 Dickeya dadantii Ech703 ATP-dependent DNA helicase RecQ YP_002985881.1 273050 D 579405 CDS YP_002985882.1 242237701 8088478 274962..275582 1 NC_012880.1 TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4171 threonine efflux system; threonine efflux system 275582 8088478 Dd703_0243 Dickeya dadantii Ech703 threonine efflux system YP_002985882.1 274962 D 579405 CDS YP_002985883.1 242237702 8088479 complement(275738..276358) 1 NC_012880.1 TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4170 homoserine/homoserine lactone efflux protein; homoserine/homoserine lactone efflux protein 276358 rhtB 8088479 rhtB Dickeya dadantii Ech703 homoserine/homoserine lactone efflux protein YP_002985883.1 275738 R 579405 CDS YP_002985884.1 242237703 8088480 276502..277494 1 NC_012880.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 277494 8088480 Dd703_0245 Dickeya dadantii Ech703 lysophospholipase L2 YP_002985884.1 276502 D 579405 CDS YP_002985885.1 242237704 8088481 277549..278349 1 NC_012880.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: eca:ECA4168 sugar phosphatase; cof family hydrolase 278349 8088481 Dd703_0246 Dickeya dadantii Ech703 cof family hydrolase YP_002985885.1 277549 D 579405 CDS YP_002985886.1 242237705 8088482 complement(278468..279820) 1 NC_012880.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter 279820 glpT 8088482 glpT Dickeya dadantii Ech703 sn-glycerol-3-phosphate transporter YP_002985886.1 278468 R 579405 CDS YP_002985887.1 242237706 8088483 280130..281788 1 NC_012880.1 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A 281788 glpA 8088483 glpA Dickeya dadantii Ech703 sn-glycerol-3-phosphate dehydrogenase subunit A YP_002985887.1 280130 D 579405 CDS YP_002985888.1 242237707 8088484 281778..283034 1 NC_012880.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 283034 8088484 Dd703_0249 Dickeya dadantii Ech703 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_002985888.1 281778 D 579405 CDS YP_002985889.1 242237708 8088485 283034..284236 1 NC_012880.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 284236 glpC 8088485 glpC Dickeya dadantii Ech703 sn-glycerol-3-phosphate dehydrogenase subunit C YP_002985889.1 283034 D 579405 CDS YP_002985890.1 242237709 8088486 284842..285537 1 NC_012880.1 PFAM: pirin; KEGG: eca:ECA4162 hypothetical protein; pirin 285537 8088486 Dd703_0251 Dickeya dadantii Ech703 pirin YP_002985890.1 284842 D 579405 CDS YP_002985891.1 242237710 8088487 complement(285677..286465) 1 NC_012880.1 PFAM: protein of unknown function DUF323; KEGG: plu:plu0187 CpmF protein involved in carbapenem resistance; hypothetical protein 286465 8088487 Dd703_0252 Dickeya dadantii Ech703 hypothetical protein YP_002985891.1 285677 R 579405 CDS YP_002985892.1 242237711 8088488 complement(286909..287448) 1 NC_012880.1 KEGG: sgl:SG0585 hypothetical protein; hypothetical protein 287448 8088488 Dd703_0253 Dickeya dadantii Ech703 hypothetical protein YP_002985892.1 286909 R 579405 CDS YP_002985893.1 242237712 8088489 287951..289579 1 NC_012880.1 PFAM: oligopeptide transporter OPT superfamily protein; KEGG: vei:Veis_1103 oligopeptide transporter OPT superfamily protein; oligopeptide transporter OPT superfamily protein 289579 8088489 Dd703_0254 Dickeya dadantii Ech703 oligopeptide transporter OPT superfamily protein YP_002985893.1 287951 D 579405 CDS YP_002985894.1 242237713 8088490 289634..290575 1 NC_012880.1 PFAM: protein of unknown function DUF1177; KEGG: vei:Veis_1102 hypothetical protein; hypothetical protein 290575 8088490 Dd703_0255 Dickeya dadantii Ech703 hypothetical protein YP_002985894.1 289634 D 579405 CDS YP_002985895.1 242237714 8088491 290577..291257 1 NC_012880.1 PFAM: AroM family protein; KEGG: spe:Spro_1025 hypothetical protein; hypothetical protein 291257 8088491 Dd703_0256 Dickeya dadantii Ech703 hypothetical protein YP_002985895.1 290577 D 579405 CDS YP_002985896.1 242237715 8088492 291285..291980 1 NC_012880.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 291980 8088492 Dd703_0257 Dickeya dadantii Ech703 peptidase E YP_002985896.1 291285 D 579405 CDS YP_002985897.1 242237716 8088493 complement(292518..293528) 1 NC_012880.1 KEGG: bja:blr1357 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 293528 8088493 Dd703_0258 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002985897.1 292518 R 579405 CDS YP_002985898.1 242237717 8088494 complement(293525..294502) 1 NC_012880.1 KEGG: bar:GBAA4733 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 294502 8088494 Dd703_0259 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002985898.1 293525 R 579405 CDS YP_002985899.1 242237718 8088495 complement(294505..295674) 1 NC_012880.1 TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: scl:sce8630 amidohydrolase; amidohydrolase 295674 8088495 Dd703_0260 Dickeya dadantii Ech703 amidohydrolase YP_002985899.1 294505 R 579405 CDS YP_002985900.1 242237719 8088496 complement(295686..296516) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0030 oligopeptide ABC transporter (permease); binding-protein-dependent transporters inner membrane component 296516 8088496 Dd703_0261 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985900.1 295686 R 579405 CDS YP_002985901.1 242237720 8088497 complement(296516..297478) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter permease protein; binding-protein-dependent transporters inner membrane component 297478 8088497 Dd703_0262 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985901.1 296516 R 579405 CDS YP_002985902.1 242237721 8088498 complement(297495..299045) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: bha:BH0031 oligopeptide ABC transporter (oligopeptide-binding protein); family 5 extracellular solute-binding protein 299045 8088498 Dd703_0263 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002985902.1 297495 R 579405 CDS YP_002985903.1 242237722 8088499 299652..300422 1 NC_012880.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: cti:RALTA_A1843 transcription regulator, IclR family; IclR family transcriptional regulator 300422 8088499 Dd703_0264 Dickeya dadantii Ech703 IclR family transcriptional regulator YP_002985903.1 299652 D 579405 CDS YP_002985904.1 242237723 8088500 300571..301566 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: spe:Spro_4652 LacI family transcription regulator; LacI family transcriptional regulator 301566 8088500 Dd703_0265 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002985904.1 300571 D 579405 CDS YP_002985905.1 242237724 8088501 complement(301708..302235) 1 NC_012880.1 KEGG: eca:ECA1839 gluconokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 302235 8088501 Dd703_0266 Dickeya dadantii Ech703 thermoresistant glucokinase family carbohydrate kinase YP_002985905.1 301708 R 579405 CDS YP_002985906.1 242237725 8088502 302496..303812 1 NC_012880.1 TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: yen:YE4021 gluconate permease; gluconate transporter 303812 8088502 Dd703_0267 Dickeya dadantii Ech703 gluconate transporter YP_002985906.1 302496 D 579405 CDS YP_002985907.1 242237726 8088503 complement(303916..304509) 1 NC_012880.1 YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase 304509 8088503 Dd703_0268 Dickeya dadantii Ech703 dITP- and XTP- hydrolase YP_002985907.1 303916 R 579405 CDS YP_002985908.1 242237727 8088504 304684..305784 1 NC_012880.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 305784 8088504 Dd703_0269 Dickeya dadantii Ech703 aspartate-semialdehyde dehydrogenase YP_002985908.1 304684 D 579405 CDS YP_002985909.1 242237728 8088505 complement(305880..306941) 1 NC_012880.1 PFAM: beta-lactamase; KEGG: pde:Pden_1080 beta-lactamase; beta-lactamase 306941 8088505 Dd703_0270 Dickeya dadantii Ech703 beta-lactamase YP_002985909.1 305880 R 579405 CDS YP_002985910.1 242237729 8088506 307333..307740 1 NC_012880.1 PFAM: NikR nickel binding; CopG domain protein DNA-binding domain protein; KEGG: azo:azo3128 nickel responsive regulator; CopG family transcriptional regulator 307740 8088506 Dd703_0271 Dickeya dadantii Ech703 CopG family transcriptional regulator YP_002985910.1 307333 D 579405 CDS YP_002985911.1 242237730 8088507 308122..308898 1 NC_012880.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: msu:MS0467 SmtA protein; type 11 methyltransferase 308898 8088507 Dd703_0272 Dickeya dadantii Ech703 type 11 methyltransferase YP_002985911.1 308122 D 579405 CDS YP_002985912.1 242237731 8088508 308909..310486 1 NC_012880.1 TIGRFAM: nickel ABC transporter periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5; KEGG: pmr:PMI2947 ABC transporter. substrate-binding protein; nickel ABC transporter substrate-binding protein 310486 8088508 Dd703_0273 Dickeya dadantii Ech703 nickel ABC transporter substrate-binding protein YP_002985912.1 308909 D 579405 CDS YP_002985913.1 242237732 8088509 310497..311435 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pmr:PMI2946 ABC-transporter permease; binding-protein-dependent transporters inner membrane component 311435 8088509 Dd703_0274 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985913.1 310497 D 579405 CDS YP_002985914.1 242237733 8088510 311432..312283 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pmr:PMI2945 ABC transporter permease; binding-protein-dependent transporters inner membrane component 312283 8088510 Dd703_0275 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985914.1 311432 D 579405 CDS YP_002985915.1 242237734 8088511 complement(312380..314065) 1 NC_012880.1 KEGG: eca:ECA4152 two-component system sensor kinase; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; signal transduction histidine kinase LytS 314065 8088511 Dd703_0276 Dickeya dadantii Ech703 signal transduction histidine kinase LytS YP_002985915.1 312380 R 579405 CDS YP_002985916.1 242237735 8088512 314638..316821 1 NC_012880.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 316821 8088512 Dd703_0277 Dickeya dadantii Ech703 glycogen branching protein YP_002985916.1 314638 D 579405 CDS YP_002985917.1 242237736 8088513 316821..318788 1 NC_012880.1 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching protein 318788 8088513 Dd703_0278 Dickeya dadantii Ech703 glycogen debranching protein YP_002985917.1 316821 D 579405 CDS YP_002985918.1 242237737 8088514 318803..320086 1 NC_012880.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 320086 glgC 8088514 glgC Dickeya dadantii Ech703 glucose-1-phosphate adenylyltransferase YP_002985918.1 318803 D 579405 CDS YP_002985919.1 242237738 8088515 320149..321582 1 NC_012880.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 321582 glgA 8088515 glgA Dickeya dadantii Ech703 glycogen synthase YP_002985919.1 320149 D 579405 CDS YP_002985920.1 242237739 8088516 321607..324054 1 NC_012880.1 KEGG: eca:ECA4147 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 324054 8088516 Dd703_0281 Dickeya dadantii Ech703 glycogen/starch/alpha-glucan phosphorylase YP_002985920.1 321607 D 579405 CDS YP_002985921.1 242237740 8088517 complement(324132..325043) 1 NC_012880.1 KEGG: cko:CKO_01694 hypothetical protein; hypothetical protein 325043 8088517 Dd703_0282 Dickeya dadantii Ech703 hypothetical protein YP_002985921.1 324132 R 579405 CDS YP_002985922.1 242237741 8088518 complement(325060..325839) 1 NC_012880.1 PFAM: cytochrome B561; KEGG: pmr:PMI0066 oxidoreductase, cytochrome b subunit; cytochrome B561 325839 8088518 Dd703_0283 Dickeya dadantii Ech703 cytochrome B561 YP_002985922.1 325060 R 579405 CDS YP_002985923.1 242237742 8088519 complement(325836..326507) 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pmr:PMI0067 oxidoreductase, Fe-S subunit; 4Fe-4S ferredoxin 326507 8088519 Dd703_0284 Dickeya dadantii Ech703 4Fe-4S ferredoxin YP_002985923.1 325836 R 579405 CDS YP_002985924.1 242237743 8088520 complement(326589..327272) 1 NC_012880.1 KEGG: eck:EC55989_1839 hypothetical protein; hypothetical protein 327272 8088520 Dd703_0285 Dickeya dadantii Ech703 hypothetical protein YP_002985924.1 326589 R 579405 CDS YP_002985925.1 242237744 8088521 complement(327294..329396) 1 NC_012880.1 KEGG: pmr:PMI0069 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase ; aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; oxidoreductase 329396 8088521 Dd703_0286 Dickeya dadantii Ech703 oxidoreductase YP_002985925.1 327294 R 579405 CDS YP_002985926.1 242237745 8088522 complement(329456..330085) 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pmr:PMI0070 oxidoreductase, Fe-S subunit; hypothetical protein 330085 8088522 Dd703_0287 Dickeya dadantii Ech703 hypothetical protein YP_002985926.1 329456 R 579405 CDS YP_002985927.1 242237746 8088523 complement(330796..332295) 1 NC_012880.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 332295 glpD 8088523 glpD Dickeya dadantii Ech703 glycerol-3-phosphate dehydrogenase YP_002985927.1 330796 R 579405 CDS YP_002985928.1 242237747 8088524 332630..332950 1 NC_012880.1 KEGG: eca:ECA4139 thiosulfate sulfurtransferase; PFAM: rhodanese; SMART: rhodanese; thiosulfate sulfurtransferase 332950 8088524 Dd703_0289 Dickeya dadantii Ech703 thiosulfate sulfurtransferase YP_002985928.1 332630 D 579405 CDS YP_002985929.1 242237748 8088525 333057..333587 1 NC_012880.1 KEGG: ypp:YPDSF_4129 endonuclease; endonuclease 333587 8088525 Dd703_0290 Dickeya dadantii Ech703 endonuclease YP_002985929.1 333057 D 579405 CDS YP_002985930.1 242237749 8088526 complement(333637..333972) 1 NC_012880.1 hypothetical protein 333972 8088526 Dd703_0291 Dickeya dadantii Ech703 hypothetical protein YP_002985930.1 333637 R 579405 CDS YP_002985931.1 242237750 8088527 complement(334546..335295) 1 NC_012880.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: lch:Lcho_1614 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); diguanylate phosphodiesterase 335295 8088527 Dd703_0292 Dickeya dadantii Ech703 diguanylate phosphodiesterase YP_002985931.1 334546 R 579405 CDS YP_002985932.1 242237751 8088528 complement(335276..335908) 1 NC_012880.1 KEGG: spe:Spro_2163 diguanylate phosphodiesterase; diguanylate phosphodiesterase 335908 8088528 Dd703_0293 Dickeya dadantii Ech703 diguanylate phosphodiesterase YP_002985932.1 335276 R 579405 CDS YP_002985933.1 242237752 8088529 complement(336234..337256) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: mmw:Mmwyl1_1602 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 337256 8088529 Dd703_0294 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002985933.1 336234 R 579405 CDS YP_002985934.1 242237753 8088530 complement(337262..338725) 1 NC_012880.1 PFAM: inositol monophosphatase; KEGG: mmw:Mmwyl1_1604 inositol-phosphate phosphatase; inositol monophosphatase 338725 8088530 Dd703_0295 Dickeya dadantii Ech703 inositol monophosphatase YP_002985934.1 337262 R 579405 CDS YP_002985935.1 242237754 8088531 complement(338771..339874) 1 NC_012880.1 KEGG: mmw:Mmwyl1_1605 ABC transporter periplasmic solute-binding protein; ABC transporter substrate-binding protein 339874 8088531 Dd703_0296 Dickeya dadantii Ech703 ABC transporter substrate-binding protein YP_002985935.1 338771 R 579405 CDS YP_002985936.1 242237755 8088532 complement(339912..340991) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mmw:Mmwyl1_1606 ABC transporter; ABC transporter 340991 8088532 Dd703_0297 Dickeya dadantii Ech703 ABC transporter YP_002985936.1 339912 R 579405 CDS YP_002985937.1 242237756 8088533 complement(340993..342828) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mmw:Mmwyl1_1607 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 342828 8088533 Dd703_0298 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002985937.1 340993 R 579405 CDS YP_002985938.1 242237757 8088534 complement(343046..344341) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: ppg:PputGB1_3154 major facilitator transporter; major facilitator superfamily protein 344341 8088534 Dd703_0299 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002985938.1 343046 R 579405 CDS YP_002985939.1 242237758 8088535 complement(344347..344826) 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: sew:SeSA_A3867 YiaL; hypothetical protein 344826 8088535 Dd703_0300 Dickeya dadantii Ech703 hypothetical protein YP_002985939.1 344347 R 579405 CDS YP_002985940.1 242237759 8088536 complement(345069..345995) 1 NC_012880.1 PFAM: dihydrodipicolinate synthetase; KEGG: efe:EFER_0075 dihydrodipicolinate synthetase (DHDPS); dihydrodipicolinate synthetase 345995 8088536 Dd703_0301 Dickeya dadantii Ech703 dihydrodipicolinate synthetase YP_002985940.1 345069 R 579405 CDS YP_002985941.1 242237760 8088538 346626..347228 1 NC_012880.1 KEGG: plu:plu3694 hypothetical protein; hypothetical protein 347228 8088538 Dd703_0303 Dickeya dadantii Ech703 hypothetical protein YP_002985941.1 346626 D 579405 CDS YP_002985942.1 242237761 8088539 complement(347474..347806) 1 NC_012880.1 PFAM: plasmid stabilization system; KEGG: eca:ECA1466 hypothetical protein; plasmid stabilization system 347806 8088539 Dd703_0304 Dickeya dadantii Ech703 plasmid stabilization system YP_002985942.1 347474 R 579405 CDS YP_002985943.1 242237762 8088540 complement(347806..348084) 1 NC_012880.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: eca:ECA1467 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 348084 8088540 Dd703_0305 Dickeya dadantii Ech703 CopG/Arc/MetJ family addiction module antidote protein YP_002985943.1 347806 R 579405 CDS YP_002985944.1 242237763 8088541 complement(348117..349217) 1 NC_012880.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 349217 xerC 8088541 xerC Dickeya dadantii Ech703 site-specific tyrosine recombinase XerC YP_002985944.1 348117 R 579405 CDS YP_002985945.1 242237764 8088542 complement(349204..352464) 1 NC_012880.1 PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; KEGG: plu:plu3714 hypothetical protein; zinc finger CHC2-family protein 352464 8088542 Dd703_0307 Dickeya dadantii Ech703 zinc finger CHC2-family protein YP_002985945.1 349204 R 579405 CDS YP_002985946.1 242237765 8088543 352579..353013 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA3401 phage regulatory protein; XRE family transcriptional regulator 353013 8088543 Dd703_0308 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002985946.1 352579 D 579405 CDS YP_002985947.1 242237766 8088544 353099..353386 1 NC_012880.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3380 hypothetical protein; hypothetical protein 353386 8088544 Dd703_0309 Dickeya dadantii Ech703 hypothetical protein YP_002985947.1 353099 D 579405 CDS YP_002985948.1 242237767 8088545 complement(353628..353975) 1 NC_012880.1 KEGG: plu:plu3717 hypothetical protein; hypothetical protein 353975 8088545 Dd703_0310 Dickeya dadantii Ech703 hypothetical protein YP_002985948.1 353628 R 579405 CDS YP_002985949.1 242237768 8088546 complement(353979..354914) 1 NC_012880.1 KEGG: plu:plu3718 hypothetical protein; hypothetical protein 354914 8088546 Dd703_0311 Dickeya dadantii Ech703 hypothetical protein YP_002985949.1 353979 R 579405 CDS YP_002985950.1 242237769 8088547 355904..356728 1 NC_012880.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 356728 8088547 Dd703_0312 Dickeya dadantii Ech703 intramembrane serine protease GlpG YP_002985950.1 355904 D 579405 CDS YP_002985951.1 242237770 8088548 356753..357511 1 NC_012880.1 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR 357511 8088548 Dd703_0313 Dickeya dadantii Ech703 DNA-binding transcriptional repressor GlpR YP_002985951.1 356753 D 579405 CDS YP_002985952.1 242237771 8088549 357557..359974 1 NC_012880.1 KEGG: eca:ECA4136 maltodextrin phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 359974 8088549 Dd703_0314 Dickeya dadantii Ech703 glycogen/starch/alpha-glucan phosphorylase YP_002985952.1 357557 D 579405 CDS YP_002985953.1 242237772 8088550 359987..362110 1 NC_012880.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 362110 malQ 8088550 malQ Dickeya dadantii Ech703 4-alpha-glucanotransferase YP_002985953.1 359987 D 579405 CDS YP_002985954.1 242237773 8088551 complement(362199..362774) 1 NC_012880.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 362774 8088551 Dd703_0316 Dickeya dadantii Ech703 DNA uptake protein YP_002985954.1 362199 R 579405 CDS YP_002985955.1 242237774 8088552 complement(362834..363535) 1 NC_012880.1 KEGG: eca:ECA4133 gluconate periplasmic binding protein; gluconate periplasmic binding protein 363535 8088552 Dd703_0317 Dickeya dadantii Ech703 gluconate periplasmic binding protein YP_002985955.1 362834 R 579405 CDS YP_002985956.1 242237775 8088553 363591..364370 1 NC_012880.1 KEGG: eca:ECA4132 biotin biosynthesis protein; TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; bioH protein 364370 8088553 Dd703_0318 Dickeya dadantii Ech703 bioH protein YP_002985956.1 363591 D 579405 CDS YP_002985957.1 242237776 8088555 complement(364706..367033) 1 NC_012880.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: eca:ECA4122 RNA binding protein; RNA binding S1 domain-containing protein 367033 8088555 Dd703_0320 Dickeya dadantii Ech703 RNA binding S1 domain-containing protein YP_002985957.1 364706 R 579405 CDS YP_002985958.1 242237777 8088556 complement(367161..368867) 1 NC_012880.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: eca:ECA4119 acyltransferase; phospholipid/glycerol acyltransferase 368867 8088556 Dd703_0321 Dickeya dadantii Ech703 phospholipid/glycerol acyltransferase YP_002985958.1 367161 R 579405 CDS YP_002985959.1 242237778 8088557 complement(369011..370999) 1 NC_012880.1 PFAM: sulfatase; KEGG: asu:Asuc_0556 sulfatase; sulfatase 370999 8088557 Dd703_0322 Dickeya dadantii Ech703 sulfatase YP_002985959.1 369011 R 579405 CDS YP_002985960.1 242237779 8088558 complement(371143..371625) 1 NC_012880.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: spc:Sputcn32_3809 transcription elongation factor GreB; transcription elongation factor GreB 371625 8088558 Dd703_0323 Dickeya dadantii Ech703 transcription elongation factor GreB YP_002985960.1 371143 R 579405 CDS YP_002985961.1 242237780 8088559 371899..372618 1 NC_012880.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 372618 ompR 8088559 ompR Dickeya dadantii Ech703 osmolarity response regulator YP_002985961.1 371899 D 579405 CDS YP_002985962.1 242237781 8088560 372615..373973 1 NC_012880.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 373973 envZ 8088560 envZ Dickeya dadantii Ech703 osmolarity sensor protein YP_002985962.1 372615 D 579405 CDS YP_002985963.1 242237782 8088561 complement(374177..375796) 1 NC_012880.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 375796 8088561 Dd703_0326 Dickeya dadantii Ech703 phosphoenolpyruvate carboxykinase YP_002985963.1 374177 R 579405 CDS YP_002985964.1 242237783 8088562 complement(376067..376939) 1 NC_012880.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 376939 hslO 8088562 hslO Dickeya dadantii Ech703 Hsp33-like chaperonin YP_002985964.1 376067 R 579405 CDS YP_002985965.1 242237784 8088563 complement(376966..377379) 1 NC_012880.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: eca:ECA4104 heat shock protein; RNA-binding S4 domain-containing protein 377379 8088563 Dd703_0328 Dickeya dadantii Ech703 RNA-binding S4 domain-containing protein YP_002985965.1 376966 R 579405 CDS YP_002985966.1 242237785 8088564 complement(377390..378067) 1 NC_012880.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: eca:ECA4103 hydrolase; HAD-superfamily hydrolase 378067 8088564 Dd703_0329 Dickeya dadantii Ech703 HAD-superfamily hydrolase YP_002985966.1 377390 R 579405 CDS YP_002985967.1 242237786 8088565 complement(378156..380300) 1 NC_012880.1 PFAM: Intracellular growth attenuator IgaA; KEGG: eca:ECA4102 intracellular growth attenuator protein; intracellular growth attenuator igaA 380300 8088565 Dd703_0330 Dickeya dadantii Ech703 intracellular growth attenuator igaA YP_002985967.1 378156 R 579405 CDS YP_002985968.1 242237787 8088566 380733..381287 1 NC_012880.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 381287 nudE 8088566 nudE Dickeya dadantii Ech703 ADP-ribose diphosphatase NudE YP_002985968.1 380733 D 579405 CDS YP_002985969.1 242237788 8088567 complement(381362..383917) 1 NC_012880.1 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 383917 mrcA 8088567 mrcA Dickeya dadantii Ech703 peptidoglycan synthetase YP_002985969.1 381362 R 579405 CDS YP_002985970.1 242237789 8088568 384035..384886 1 NC_012880.1 KEGG: eca:ECA4098 hypothetical protein; hypothetical protein 384886 8088568 Dd703_0333 Dickeya dadantii Ech703 hypothetical protein YP_002985970.1 384035 D 579405 CDS YP_002985971.1 242237790 8088569 384886..385446 1 NC_012880.1 PFAM: fimbrial assembly family protein; KEGG: spe:Spro_4609 fimbrial assembly family protein; fimbrial assembly family protein 385446 8088569 Dd703_0334 Dickeya dadantii Ech703 fimbrial assembly family protein YP_002985971.1 384886 D 579405 CDS YP_002985972.1 242237791 8088570 385443..386003 1 NC_012880.1 KEGG: eca:ECA4096 hypothetical protein; hypothetical protein 386003 8088570 Dd703_0335 Dickeya dadantii Ech703 hypothetical protein YP_002985972.1 385443 D 579405 CDS YP_002985973.1 242237792 8088571 386000..386371 1 NC_012880.1 KEGG: eca:ECA4095 hypothetical protein; hypothetical protein 386371 8088571 Dd703_0336 Dickeya dadantii Ech703 hypothetical protein YP_002985973.1 386000 D 579405 CDS YP_002985974.1 242237793 8088572 386382..387662 1 NC_012880.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; outer membrane porin HofQ 387662 hofQ 8088572 hofQ Dickeya dadantii Ech703 outer membrane porin HofQ YP_002985974.1 386382 D 579405 CDS YP_002985975.1 242237794 8088573 387943..388512 1 NC_012880.1 PFAM: shikimate kinase; KEGG: esa:ESA_04351 shikimate kinase I; shikimate kinase 388512 8088573 Dd703_0338 Dickeya dadantii Ech703 shikimate kinase YP_002985975.1 387943 D 579405 CDS YP_002985976.1 242237795 8088574 388566..389651 1 NC_012880.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 389651 aroB 8088574 aroB Dickeya dadantii Ech703 3-dehydroquinate synthase YP_002985976.1 388566 D 579405 CDS YP_002985977.1 242237796 8088575 389784..390833 1 NC_012880.1 PFAM: sporulation domain protein; KEGG: eca:ECA4091 hypothetical protein; hypothetical protein 390833 8088575 Dd703_0340 Dickeya dadantii Ech703 hypothetical protein YP_002985977.1 389784 D 579405 CDS YP_002985978.1 242237797 8088576 390911..391726 1 NC_012880.1 KEGG: eca:ECA4090 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 391726 8088576 Dd703_0341 Dickeya dadantii Ech703 DNA adenine methylase YP_002985978.1 390911 D 579405 CDS YP_002985979.1 242237798 8088577 391850..392527 1 NC_012880.1 KEGG: eum:ECUMN_3844 D-ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 392527 8088577 Dd703_0342 Dickeya dadantii Ech703 ribulose-phosphate 3-epimerase YP_002985979.1 391850 D 579405 CDS YP_002985980.1 242237799 8088578 392520..393221 1 NC_012880.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 393221 8088578 Dd703_0343 Dickeya dadantii Ech703 phosphoglycolate phosphatase YP_002985980.1 392520 D 579405 CDS YP_002985981.1 242237800 8088579 393218..394222 1 NC_012880.1 KEGG: kpe:KPK_0361 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 394222 8088579 Dd703_0344 Dickeya dadantii Ech703 tryptophanyl-tRNA synthetase YP_002985981.1 393218 D 579405 CDS YP_002985982.1 242237801 8088580 394472..395626 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA4077 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 395626 8088580 Dd703_0345 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002985982.1 394472 D 579405 CDS YP_002985983.1 242237802 8088581 395966..396538 1 NC_012880.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: eca:ECA4071 peptidyl-prolyl cis-trans isomerase A (rotamase A); peptidyl-prolyl cis-trans isomerase A 396538 8088581 Dd703_0346 Dickeya dadantii Ech703 peptidyl-prolyl cis-trans isomerase A YP_002985983.1 395966 D 579405 CDS YP_002985984.1 242237803 8088582 complement(396599..398194) 1 NC_012880.1 KEGG: ajs:Ajs_4122 diguanylate cyclase; TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; hemerythrin HHE cation binding domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase with hemerythrin-like metal-binding domain 398194 8088582 Dd703_0347 Dickeya dadantii Ech703 diguanylate cyclase with hemerythrin-like metal-binding domain YP_002985984.1 396599 R 579405 CDS YP_002985985.1 242237804 8088583 complement(398592..398966) 1 NC_012880.1 KEGG: eca:ECA1072 glutathione S-transferase; glutathione S-transferase 398966 8088583 Dd703_0348 Dickeya dadantii Ech703 glutathione S-transferase YP_002985985.1 398592 R 579405 CDS YP_002985986.1 242237805 8088584 complement(399001..399678) 1 NC_012880.1 PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA3563 hypothetical protein; ThiJ/PfpI domain-containing protein 399678 8088584 Dd703_0349 Dickeya dadantii Ech703 ThiJ/PfpI domain-containing protein YP_002985986.1 399001 R 579405 CDS YP_002985987.1 242237806 8088586 complement(399903..401168) 1 NC_012880.1 KEGG: eca:ECA4070 pectate lyase; pectate lyase 401168 8088586 Dd703_0351 Dickeya dadantii Ech703 pectate lyase YP_002985987.1 399903 R 579405 CDS YP_002985988.1 242237807 8088587 complement(401304..402431) 1 NC_012880.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA4069 pectate lyase III; Pectate lyase/Amb allergen 402431 8088587 Dd703_0352 Dickeya dadantii Ech703 Pectate lyase/Amb allergen YP_002985988.1 401304 R 579405 CDS YP_002985989.1 242237808 8088588 complement(402889..404019) 1 NC_012880.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA4069 pectate lyase III; Pectate lyase/Amb allergen 404019 8088588 Dd703_0353 Dickeya dadantii Ech703 Pectate lyase/Amb allergen YP_002985989.1 402889 R 579405 CDS YP_002985990.1 242237809 8088589 404444..405790 1 NC_012880.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: vvu:VV2_1425 glutamate decarboxylase; pyridoxal-dependent decarboxylase 405790 8088589 Dd703_0354 Dickeya dadantii Ech703 pyridoxal-dependent decarboxylase YP_002985990.1 404444 D 579405 CDS YP_002985991.1 242237810 8088590 405792..406805 1 NC_012880.1 KEGG: fph:Fphi_0374 hypothetical protein; hypothetical protein 406805 8088590 Dd703_0355 Dickeya dadantii Ech703 hypothetical protein YP_002985991.1 405792 D 579405 CDS YP_002985992.1 242237811 8088591 406802..408088 1 NC_012880.1 KEGG: dal:Dalk_2018 PAS/PAC sensor hybrid histidine kinase; signal transduction histidine kinase regulating citrate/malate metabolism 408088 8088591 Dd703_0356 Dickeya dadantii Ech703 signal transduction histidine kinase regulating citrate/malate metabolism YP_002985992.1 406802 D 579405 CDS YP_002985993.1 242237812 8088592 408085..409227 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_3861 major facilitator transporter; major facilitator superfamily protein 409227 8088592 Dd703_0357 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002985993.1 408085 D 579405 CDS YP_002985994.1 242237813 8088593 409370..409993 1 NC_012880.1 PFAM: glycoside hydrolase family 19; KEGG: pap:PSPA7_2430 lytic enzyme; glycoside hydrolase family protein 409993 8088593 Dd703_0358 Dickeya dadantii Ech703 glycoside hydrolase family protein YP_002985994.1 409370 D 579405 CDS YP_002985995.1 242237814 8088594 410479..411696 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: smt:Smal_2105 sigma54 specific transcriptional regulator; AraC family transcriptional regulator 411696 8088594 Dd703_0359 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002985995.1 410479 D 579405 CDS YP_002985996.1 242237815 8088595 411699..412094 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_2358 AraC family transcriptional regulator; AraC family transcriptional regulator 412094 8088595 Dd703_0360 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002985996.1 411699 D 579405 CDS YP_002985997.1 242237816 8088596 412229..412816 1 NC_012880.1 KEGG: bur:Bcep18194_B1924 hypothetical protein; hypothetical protein 412816 8088596 Dd703_0361 Dickeya dadantii Ech703 hypothetical protein YP_002985997.1 412229 D 579405 CDS YP_002985998.1 242237817 8088597 412877..413662 1 NC_012880.1 KEGG: pin:Ping_2136 hypothetical protein; hypothetical protein 413662 8088597 Dd703_0362 Dickeya dadantii Ech703 hypothetical protein YP_002985998.1 412877 D 579405 CDS YP_002985999.1 242237818 8088598 413674..414231 1 NC_012880.1 KEGG: lch:Lcho_2130 hypothetical protein; hypothetical protein 414231 8088598 Dd703_0363 Dickeya dadantii Ech703 hypothetical protein YP_002985999.1 413674 D 579405 CDS YP_002986000.1 242237819 8088599 414228..414470 1 NC_012880.1 hypothetical protein 414470 8088599 Dd703_0364 Dickeya dadantii Ech703 hypothetical protein YP_002986000.1 414228 D 579405 CDS YP_002986001.1 242237820 8088600 414470..415294 1 NC_012880.1 hypothetical protein 415294 8088600 Dd703_0365 Dickeya dadantii Ech703 hypothetical protein YP_002986001.1 414470 D 579405 CDS YP_002986002.1 242237821 8088601 415478..415792 1 NC_012880.1 KEGG: bte:BTH_II1638 hypothetical protein; hypothetical protein 415792 8088601 Dd703_0366 Dickeya dadantii Ech703 hypothetical protein YP_002986002.1 415478 D 579405 CDS YP_002986003.1 242237822 8088602 416229..416807 1 NC_012880.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: yen:YE3958 para-aminobenzoate synthase component II; glutamine amidotransferase 416807 8088602 Dd703_0367 Dickeya dadantii Ech703 glutamine amidotransferase YP_002986003.1 416229 D 579405 CDS YP_002986004.1 242237823 8088603 416929..418149 1 NC_012880.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 418149 argD 8088603 argD Dickeya dadantii Ech703 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_002986004.1 416929 D 579405 CDS YP_002986005.1 242237824 8088604 complement(418218..418850) 1 NC_012880.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 418850 8088604 Dd703_0369 Dickeya dadantii Ech703 cAMP-regulatory protein YP_002986005.1 418218 R 579405 CDS YP_002986006.1 242237825 8088605 419166..419573 1 NC_012880.1 PFAM: OsmC family protein; KEGG: eca:ECA4063 hypothetical protein; hypothetical protein 419573 8088605 Dd703_0370 Dickeya dadantii Ech703 hypothetical protein YP_002986006.1 419166 D 579405 CDS YP_002986007.1 242237826 8088606 complement(419626..420495) 1 NC_012880.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: eca:ECA4062 phosphoribulokinase; phosphoribulokinase 420495 8088606 Dd703_0371 Dickeya dadantii Ech703 phosphoribulokinase YP_002986007.1 419626 R 579405 CDS YP_002986008.1 242237827 8088607 complement(420613..420849) 1 NC_012880.1 PFAM: protein of unknown function UPF0270; KEGG: set:SEN3290 hypothetical protein; hypothetical protein 420849 8088607 Dd703_0372 Dickeya dadantii Ech703 hypothetical protein YP_002986008.1 420613 R 579405 CDS YP_002986009.1 242237828 8088608 complement(420851..421843) 1 NC_012880.1 PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA4060 hydrolase; hydrolase 421843 8088608 Dd703_0373 Dickeya dadantii Ech703 hydrolase YP_002986009.1 420851 R 579405 CDS YP_002986010.1 242237829 8088609 421929..422534 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA4059 hypothetical protein; lysine exporter protein LysE/YggA 422534 8088609 Dd703_0374 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002986010.1 421929 D 579405 CDS YP_002986011.1 242237830 8088610 complement(422593..424506) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA4058 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 424506 8088610 Dd703_0375 Dickeya dadantii Ech703 ABC transporter ATP-binding protein YP_002986011.1 422593 R 579405 CDS YP_002986012.1 242237831 8088611 424628..425179 1 NC_012880.1 required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG 425179 8088611 Dd703_0376 Dickeya dadantii Ech703 glutathione-regulated potassium-efflux system ancillary protein KefG YP_002986012.1 424628 D 579405 CDS YP_002986013.1 242237832 8088612 425182..426990 1 NC_012880.1 involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB 426990 8088612 Dd703_0377 Dickeya dadantii Ech703 glutathione-regulated potassium-efflux system protein KefB YP_002986013.1 425182 D 579405 CDS YP_002986014.1 242237833 8088613 427046..427240 1 NC_012880.1 KEGG: eca:ECA4055 hypothetical protein; hypothetical protein 427240 8088613 Dd703_0378 Dickeya dadantii Ech703 hypothetical protein YP_002986014.1 427046 D 579405 CDS YP_002986015.1 242237834 8088614 427346..427945 1 NC_012880.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ent:Ent638_3766 FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 427945 8088614 Dd703_0379 Dickeya dadantii Ech703 FKBP-type peptidylprolyl isomerase YP_002986015.1 427346 D 579405 CDS YP_002986016.1 242237835 8088615 complement(428016..429383) 1 NC_012880.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: eta:ETA_25540 ethanolamin permease; ethanolamine transporter 429383 8088615 Dd703_0380 Dickeya dadantii Ech703 ethanolamine transporter YP_002986016.1 428016 R 579405 CDS YP_002986017.1 242237836 8088616 429719..430720 1 NC_012880.1 PFAM: aminoglycoside phosphotransferase; KEGG: eta:ETA_25530 hypothetical protein; aminoglycoside phosphotransferase 430720 8088616 Dd703_0381 Dickeya dadantii Ech703 aminoglycoside phosphotransferase YP_002986017.1 429719 D 579405 CDS YP_002986018.1 242237837 8088617 430864..431907 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eta:ETA_25520 AraC family transcriptional regulator; AraC family transcriptional regulator 431907 8088617 Dd703_0382 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986018.1 430864 D 579405 CDS YP_002986019.1 242237838 8088618 complement(431932..432150) 1 NC_012880.1 PFAM: SlyX family protein; KEGG: eta:ETA_31750 host factor for lysis of phiX174 infection SlyX; SlyX family protein 432150 8088618 Dd703_0383 Dickeya dadantii Ech703 SlyX family protein YP_002986019.1 431932 R 579405 CDS YP_002986020.1 242237839 8088619 432356..433192 1 NC_012880.1 rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase 433192 8088619 Dd703_0384 Dickeya dadantii Ech703 FKBP-type peptidyl-prolyl cis-trans isomerase YP_002986020.1 432356 D 579405 CDS YP_002986021.1 242237840 8088620 complement(433377..434735) 1 NC_012880.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rlt:Rleg2_5225 GntR family transcriptional regulator; GntR family transcriptional regulator 434735 8088620 Dd703_0385 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986021.1 433377 R 579405 CDS YP_002986022.1 242237841 8088621 434881..435843 1 NC_012880.1 KEGG: vei:Veis_2840 hypothetical protein; hypothetical protein 435843 8088621 Dd703_0386 Dickeya dadantii Ech703 hypothetical protein YP_002986022.1 434881 D 579405 CDS YP_002986023.1 242237842 8088622 435847..436641 1 NC_012880.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eta:ETA_23610 hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 436641 8088622 Dd703_0387 Dickeya dadantii Ech703 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002986023.1 435847 D 579405 CDS YP_002986024.1 242237843 8088623 436659..437549 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ara:Arad_8818 amino acid ABC transporter; family 3 extracellular solute-binding protein 437549 8088623 Dd703_0388 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002986024.1 436659 D 579405 CDS YP_002986025.1 242237844 8088624 437546..438526 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_8820 amino acid ABC transporter; polar amino acid ABC transporter permease 438526 8088624 Dd703_0389 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002986025.1 437546 D 579405 CDS YP_002986026.1 242237845 8088625 438523..439293 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ara:Arad_8821 amino acid ABC transporter; ABC transporter 439293 8088625 Dd703_0390 Dickeya dadantii Ech703 ABC transporter YP_002986026.1 438523 D 579405 CDS YP_002986027.1 242237846 8088626 complement(439431..440516) 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA4045 sensor protein BasS/PmrB; sensor protein BasS/PmrB 440516 8088626 Dd703_0391 Dickeya dadantii Ech703 sensor protein BasS/PmrB YP_002986027.1 439431 R 579405 CDS YP_002986028.1 242237847 8088627 complement(440513..441181) 1 NC_012880.1 response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR 441181 8088627 Dd703_0392 Dickeya dadantii Ech703 DNA-binding transcriptional regulator BasR YP_002986028.1 440513 R 579405 CDS YP_002986029.1 242237848 8088629 442984..443733 1 NC_012880.1 PFAM: YheO domain protein; KEGG: eca:ECA4042 DNA-binding protein; YheO domain-containing protein 443733 8088629 Dd703_0394 Dickeya dadantii Ech703 YheO domain-containing protein YP_002986029.1 442984 D 579405 CDS YP_002986030.1 242237849 8088630 443733..444122 1 NC_012880.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 444122 8088630 Dd703_0395 Dickeya dadantii Ech703 sulfur transfer complex subunit TusD YP_002986030.1 443733 D 579405 CDS YP_002986031.1 242237850 8088631 444143..444502 1 NC_012880.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC 444502 8088631 Dd703_0396 Dickeya dadantii Ech703 sulfur relay protein TusC YP_002986031.1 444143 D 579405 CDS YP_002986032.1 242237851 8088632 444512..444799 1 NC_012880.1 TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: eca:ECA4039 intracellular sulfur oxidation protein; sulfur relay protein TusB/DsrH 444799 8088632 Dd703_0397 Dickeya dadantii Ech703 sulfur relay protein TusB/DsrH YP_002986032.1 444512 D 579405 CDS YP_002986033.1 242237852 8088633 444935..445309 1 NC_012880.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: kpn:KPN_03727 30S ribosomal protein S12; 30S ribosomal protein S12 445309 8088633 Dd703_0398 Dickeya dadantii Ech703 30S ribosomal protein S12 YP_002986033.1 444935 D 579405 CDS YP_002986034.1 242237853 8088634 445406..445876 1 NC_012880.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 445876 8088634 Dd703_0399 Dickeya dadantii Ech703 30S ribosomal protein S7 YP_002986034.1 445406 D 579405 CDS YP_002986035.1 242237854 8088635 445969..448083 1 NC_012880.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 448083 8088635 Dd703_0400 Dickeya dadantii Ech703 elongation factor G YP_002986035.1 445969 D 579405 CDS YP_002986036.1 242237855 8088636 448155..449339 1 NC_012880.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 449339 8088636 Dd703_0401 Dickeya dadantii Ech703 elongation factor Tu YP_002986036.1 448155 D 579405 CDS YP_002986037.1 242237856 8088637 449468..449662 1 NC_012880.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA4034 bacterioferritin-associated ferredoxin; BFD (2Fe-2S)-binding domain-containing protein 449662 8088637 Dd703_0402 Dickeya dadantii Ech703 BFD (2Fe-2S)-binding domain-containing protein YP_002986037.1 449468 D 579405 CDS YP_002986038.1 242237857 8088638 449737..450210 1 NC_012880.1 iron storage protein; bacterioferritin 450210 8088638 Dd703_0403 Dickeya dadantii Ech703 bacterioferritin YP_002986038.1 449737 D 579405 CDS YP_002986039.1 242237858 8088639 450510..450821 1 NC_012880.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 450821 rpsJ 8088639 rpsJ Dickeya dadantii Ech703 30S ribosomal protein S10 YP_002986039.1 450510 D 579405 CDS YP_002986040.1 242237859 8088640 450854..451483 1 NC_012880.1 PFAM: ribosomal protein L3; KEGG: eca:ECA4031 50S ribosomal protein L3; 50S ribosomal protein L3 451483 8088640 Dd703_0405 Dickeya dadantii Ech703 50S ribosomal protein L3 YP_002986040.1 450854 D 579405 CDS YP_002986041.1 242237860 8088641 451494..452099 1 NC_012880.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 452099 rplD 8088641 rplD Dickeya dadantii Ech703 50S ribosomal protein L4 YP_002986041.1 451494 D 579405 CDS YP_002986042.1 242237861 8088642 452096..452398 1 NC_012880.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 452398 rplW 8088642 rplW Dickeya dadantii Ech703 50S ribosomal protein L23 YP_002986042.1 452096 D 579405 CDS YP_002986043.1 242237862 8088643 452416..453237 1 NC_012880.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 453237 rplB 8088643 rplB Dickeya dadantii Ech703 50S ribosomal protein L2 YP_002986043.1 452416 D 579405 CDS YP_002986044.1 242237863 8088644 453254..453532 1 NC_012880.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 453532 rpsS 8088644 rpsS Dickeya dadantii Ech703 30S ribosomal protein S19 YP_002986044.1 453254 D 579405 CDS YP_002986045.1 242237864 8088645 453547..453879 1 NC_012880.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 453879 rplV 8088645 rplV Dickeya dadantii Ech703 50S ribosomal protein L22 YP_002986045.1 453547 D 579405 CDS YP_002986046.1 242237865 8088646 453897..454598 1 NC_012880.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 454598 rpsC 8088646 rpsC Dickeya dadantii Ech703 30S ribosomal protein S3 YP_002986046.1 453897 D 579405 CDS YP_002986047.1 242237866 8088647 454611..455021 1 NC_012880.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: eca:ECA4024 50S ribosomal protein L16; 50S ribosomal protein L16 455021 8088647 Dd703_0412 Dickeya dadantii Ech703 50S ribosomal protein L16 YP_002986047.1 454611 D 579405 CDS YP_002986048.1 242237867 8088648 455021..455212 1 NC_012880.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: ypi:YpsIP31758_3907 50S ribosomal protein L29; 50S ribosomal protein L29 455212 8088648 Dd703_0413 Dickeya dadantii Ech703 50S ribosomal protein L29 YP_002986048.1 455021 D 579405 CDS YP_002986049.1 242237868 8088649 455212..455466 1 NC_012880.1 PFAM: ribosomal protein S17; KEGG: eum:ECUMN_3784 30S ribosomal subunit protein S17; 30S ribosomal protein S17 455466 8088649 Dd703_0414 Dickeya dadantii Ech703 30S ribosomal protein S17 YP_002986049.1 455212 D 579405 CDS YP_002986050.1 242237869 8088650 455636..456007 1 NC_012880.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 456007 rplN 8088650 rplN Dickeya dadantii Ech703 50S ribosomal protein L14 YP_002986050.1 455636 D 579405 CDS YP_002986051.1 242237870 8088651 456018..456332 1 NC_012880.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 456332 rplX 8088651 rplX Dickeya dadantii Ech703 50S ribosomal protein L24 YP_002986051.1 456018 D 579405 CDS YP_002986052.1 242237871 8088652 456347..456886 1 NC_012880.1 PFAM: ribosomal protein L5; KEGG: eca:ECA4019 50S ribosomal protein L5; 50S ribosomal protein L5 456886 8088652 Dd703_0417 Dickeya dadantii Ech703 50S ribosomal protein L5 YP_002986052.1 456347 D 579405 CDS YP_002986053.1 242237872 8088653 456899..457204 1 NC_012880.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 457204 rpsN 8088653 rpsN Dickeya dadantii Ech703 30S ribosomal protein S14 YP_002986053.1 456899 D 579405 CDS YP_002986054.1 242237873 8088654 457238..457630 1 NC_012880.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 457630 rpsH 8088654 rpsH Dickeya dadantii Ech703 30S ribosomal protein S8 YP_002986054.1 457238 D 579405 CDS YP_002986055.1 242237874 8088655 457644..458177 1 NC_012880.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 458177 rplF 8088655 rplF Dickeya dadantii Ech703 50S ribosomal protein L6 YP_002986055.1 457644 D 579405 CDS YP_002986056.1 242237875 8088656 458187..458540 1 NC_012880.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 458540 rplR 8088656 rplR Dickeya dadantii Ech703 50S ribosomal protein L18 YP_002986056.1 458187 D 579405 CDS YP_002986057.1 242237876 8088657 458555..459055 1 NC_012880.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 459055 rpsE 8088657 rpsE Dickeya dadantii Ech703 30S ribosomal protein S5 YP_002986057.1 458555 D 579405 CDS YP_002986058.1 242237877 8088658 459062..459241 1 NC_012880.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 459241 rpmD 8088658 rpmD Dickeya dadantii Ech703 50S ribosomal protein L30 YP_002986058.1 459062 D 579405 CDS YP_002986059.1 242237878 8088659 459245..459679 1 NC_012880.1 late assembly protein; 50S ribosomal protein L15 459679 rplO 8088659 rplO Dickeya dadantii Ech703 50S ribosomal protein L15 YP_002986059.1 459245 D 579405 CDS YP_002986060.1 242237879 8088660 459687..461018 1 NC_012880.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 461018 secY 8088660 secY Dickeya dadantii Ech703 preprotein translocase subunit SecY YP_002986060.1 459687 D 579405 CDS YP_002986061.1 242237880 8088661 461053..461169 1 NC_012880.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 461169 rpmJ 8088661 rpmJ Dickeya dadantii Ech703 50S ribosomal protein L36 YP_002986061.1 461053 D 579405 CDS YP_002986062.1 242237881 8088662 461316..461672 1 NC_012880.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 461672 rpsM 8088662 rpsM Dickeya dadantii Ech703 30S ribosomal protein S13 YP_002986062.1 461316 D 579405 CDS YP_002986063.1 242237882 8088663 461689..462078 1 NC_012880.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 462078 8088663 Dd703_0428 Dickeya dadantii Ech703 30S ribosomal protein S11 YP_002986063.1 461689 D 579405 CDS YP_002986064.1 242237883 8088664 462109..462729 1 NC_012880.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 462729 rpsD 8088664 rpsD Dickeya dadantii Ech703 30S ribosomal protein S4 YP_002986064.1 462109 D 579405 CDS YP_002986065.1 242237884 8088665 462755..463744 1 NC_012880.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 463744 8088665 Dd703_0430 Dickeya dadantii Ech703 DNA-directed RNA polymerase subunit alpha YP_002986065.1 462755 D 579405 CDS YP_002986066.1 242237885 8088666 463785..464177 1 NC_012880.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 464177 rplQ 8088666 rplQ Dickeya dadantii Ech703 50S ribosomal protein L17 YP_002986066.1 463785 D 579405 CDS YP_002986067.1 242237886 8088668 464744..464944 1 NC_012880.1 PFAM: protein of unknown function DUF331; KEGG: set:SEN3239 hypothetical protein; hypothetical protein 464944 8088668 Dd703_0433 Dickeya dadantii Ech703 hypothetical protein YP_002986067.1 464744 D 579405 CDS YP_002986068.1 242237887 8088669 complement(465025..466065) 1 NC_012880.1 PFAM: Integrase catalytic region; KEGG: son:SO_A0151 ISSod13, transposase; Integrase catalytic subunit 466065 8088669 Dd703_0434 Dickeya dadantii Ech703 Integrase catalytic subunit YP_002986068.1 465025 R 579405 CDS YP_002986069.1 242237888 8088670 complement(466187..466594) 1 NC_012880.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: eca:ECA4003 large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 466594 8088670 Dd703_0435 Dickeya dadantii Ech703 large conductance mechanosensitive channel protein YP_002986069.1 466187 R 579405 CDS YP_002986070.1 242237889 8088671 complement(466685..468061) 1 NC_012880.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 468061 trkA 8088671 trkA Dickeya dadantii Ech703 potassium transporter peripheral membrane protein YP_002986070.1 466685 R 579405 CDS YP_002986071.1 242237890 8088672 complement(468110..469405) 1 NC_012880.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B 469405 8088672 Dd703_0437 Dickeya dadantii Ech703 16S rRNA methyltransferase B YP_002986071.1 468110 R 579405 CDS YP_002986072.1 242237891 8088673 complement(469466..470407) 1 NC_012880.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: sdy:SDY_3464 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 470407 8088673 Dd703_0438 Dickeya dadantii Ech703 methionyl-tRNA formyltransferase YP_002986072.1 469466 R 579405 CDS YP_002986073.1 242237892 8088674 complement(470437..470949) 1 NC_012880.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 470949 def 8088674 def Dickeya dadantii Ech703 peptide deformylase YP_002986073.1 470437 R 579405 CDS YP_002986074.1 242237893 8088675 471061..472194 1 NC_012880.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: eca:ECA3998 hypothetical protein; DNA protecting protein DprA 472194 8088675 Dd703_0440 Dickeya dadantii Ech703 DNA protecting protein DprA YP_002986074.1 471061 D 579405 CDS YP_002986075.1 242237894 8088676 472166..472636 1 NC_012880.1 PFAM: protein of unknown function DUF494; KEGG: eca:ECA3997 hypothetical protein; hypothetical protein 472636 8088676 Dd703_0441 Dickeya dadantii Ech703 hypothetical protein YP_002986075.1 472166 D 579405 CDS YP_002986076.1 242237895 8088677 472657..473214 1 NC_012880.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: spe:Spro_4508 DNA topoisomerase type IA Zn finger domain-containing protein; DNA topoisomerase type IA zn finger domain-containing protein 473214 8088677 Dd703_0442 Dickeya dadantii Ech703 DNA topoisomerase type IA zn finger domain-containing protein YP_002986076.1 472657 D 579405 CDS YP_002986077.1 242237896 8088678 473207..473776 1 NC_012880.1 PFAM: SUA5/yciO/yrdC domain; KEGG: eca:ECA3996 DNA topoisomerase; SUA5/yciO/yrdC domain-containing protein 473776 8088678 Dd703_0443 Dickeya dadantii Ech703 SUA5/yciO/yrdC domain-containing protein YP_002986077.1 473207 D 579405 CDS YP_002986078.1 242237897 8088679 473799..474626 1 NC_012880.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; KEGG: eca:ECA3995 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 474626 8088679 Dd703_0444 Dickeya dadantii Ech703 shikimate 5-dehydrogenase YP_002986078.1 473799 D 579405 CDS YP_002986079.1 242237898 8088680 474623..474880 1 NC_012880.1 PFAM: protein of unknown function DUF1488; KEGG: sed:SeD_A3767 periplasmic protein; hypothetical protein 474880 8088680 Dd703_0445 Dickeya dadantii Ech703 hypothetical protein YP_002986079.1 474623 D 579405 CDS YP_002986080.1 242237899 8088681 complement(474874..475410) 1 NC_012880.1 KEGG: eca:ECA3993 transferase; transferase 475410 8088681 Dd703_0446 Dickeya dadantii Ech703 transferase YP_002986080.1 474874 R 579405 CDS YP_002986081.1 242237900 8088689 481382..481708 1 NC_012880.1 KEGG: stm:STM0948 cytoplasmic protein; hypothetical protein 481708 8088689 Dd703_0447 Dickeya dadantii Ech703 hypothetical protein YP_002986081.1 481382 D 579405 CDS YP_002986082.1 242237901 8088691 482814..483743 1 NC_012880.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 483743 8088691 Dd703_0449 Dickeya dadantii Ech703 homoserine O-succinyltransferase YP_002986082.1 482814 D 579405 CDS YP_002986083.1 242237902 8088692 484045..485643 1 NC_012880.1 KEGG: eca:ECA3991 malate synthase; TIGRFAM: malate synthase A; PFAM: malate synthase; malate synthase A 485643 8088692 Dd703_0450 Dickeya dadantii Ech703 malate synthase A YP_002986083.1 484045 D 579405 CDS YP_002986084.1 242237903 8088693 485667..486977 1 NC_012880.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: eca:ECA3990 isocitrate lyase; isocitrate lyase 486977 8088693 Dd703_0451 Dickeya dadantii Ech703 isocitrate lyase YP_002986084.1 485667 D 579405 CDS YP_002986085.1 242237904 8088694 487050..488807 1 NC_012880.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 488807 aceK 8088694 aceK Dickeya dadantii Ech703 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_002986085.1 487050 D 579405 CDS YP_002986086.1 242237905 8088695 complement(488815..489648) 1 NC_012880.1 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; IclR family transcriptional regulator 489648 8088695 Dd703_0453 Dickeya dadantii Ech703 IclR family transcriptional regulator YP_002986086.1 488815 R 579405 CDS YP_002986087.1 242237906 8088696 489872..493558 1 NC_012880.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 493558 metH 8088696 metH Dickeya dadantii Ech703 B12-dependent methionine synthase YP_002986087.1 489872 D 579405 CDS YP_002986088.1 242237907 8088697 493595..494953 1 NC_012880.1 KEGG: eba:ebA5917 hypothetical protein; hypothetical protein 494953 8088697 Dd703_0455 Dickeya dadantii Ech703 hypothetical protein YP_002986088.1 493595 D 579405 CDS YP_002986089.1 242237908 8088698 494928..495554 1 NC_012880.1 KEGG: eba:ebA5228 hypothetical protein; hypothetical protein 495554 8088698 Dd703_0456 Dickeya dadantii Ech703 hypothetical protein YP_002986089.1 494928 D 579405 CDS YP_002986090.1 242237909 8088699 495684..496679 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA3986 AraC family transcription regulator; AraC family transcriptional regulator 496679 8088699 Dd703_0457 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986090.1 495684 D 579405 CDS YP_002986091.1 242237910 8088700 496818..498935 1 NC_012880.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA3985 ferrioxamine B receptor; TonB-dependent siderophore receptor 498935 8088700 Dd703_0458 Dickeya dadantii Ech703 TonB-dependent siderophore receptor YP_002986091.1 496818 D 579405 CDS YP_002986092.1 242237911 8088701 complement(499109..500002) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_2915 LysR family transcriptional regulator; LysR family transcriptional regulator 500002 8088701 Dd703_0459 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986092.1 499109 R 579405 CDS YP_002986093.1 242237912 8088702 500106..501635 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_2916 major facilitator family transporter; major facilitator superfamily protein 501635 8088702 Dd703_0460 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986093.1 500106 D 579405 CDS YP_002986094.1 242237913 8088703 501864..503510 1 NC_012880.1 TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: eca:ECA3983 sodium/phosphate cotransporter; sodium-dependent inorganic phosphate (Pi) transporter 503510 8088703 Dd703_0461 Dickeya dadantii Ech703 sodium-dependent inorganic phosphate (Pi) transporter YP_002986094.1 501864 D 579405 CDS YP_002986095.1 242237914 8088704 complement(503601..504968) 1 NC_012880.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 504968 8088704 Dd703_0462 Dickeya dadantii Ech703 aspartate kinase III YP_002986095.1 503601 R 579405 CDS YP_002986096.1 242237915 8088705 505460..507112 1 NC_012880.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 507112 pgi 8088705 pgi Dickeya dadantii Ech703 glucose-6-phosphate isomerase YP_002986096.1 505460 D 579405 CDS YP_002986097.1 242237916 8088706 507341..507685 1 NC_012880.1 KEGG: spe:Spro_0410 hypothetical protein; hypothetical protein 507685 8088706 Dd703_0464 Dickeya dadantii Ech703 hypothetical protein YP_002986097.1 507341 D 579405 CDS YP_002986098.1 242237917 8088707 complement(507709..508755) 1 NC_012880.1 KEGG: eca:ECA3977 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM protein; lysine 2,3-aminomutase YodO family protein 508755 8088707 Dd703_0465 Dickeya dadantii Ech703 lysine 2,3-aminomutase YodO family protein YP_002986098.1 507709 R 579405 CDS YP_002986099.1 242237918 8088708 508791..509357 1 NC_012880.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 509357 8088708 Dd703_0466 Dickeya dadantii Ech703 elongation factor P YP_002986099.1 508791 D 579405 CDS YP_002986100.1 242237919 8088709 509499..509852 1 NC_012880.1 PFAM: protein of unknown function DUF486; KEGG: eca:ECA3974 hypothetical protein; hypothetical protein 509852 8088709 Dd703_0467 Dickeya dadantii Ech703 hypothetical protein YP_002986100.1 509499 D 579405 CDS YP_002986101.1 242237920 8088710 complement(510392..510748) 1 NC_012880.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 510748 8088710 Dd703_0468 Dickeya dadantii Ech703 fumarate reductase subunit D YP_002986101.1 510392 R 579405 CDS YP_002986102.1 242237921 8088711 complement(510763..511158) 1 NC_012880.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 511158 8088711 Dd703_0469 Dickeya dadantii Ech703 fumarate reductase subunit C YP_002986102.1 510763 R 579405 CDS YP_002986103.1 242237922 8088712 complement(511176..511910) 1 NC_012880.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 511910 8088712 Dd703_0470 Dickeya dadantii Ech703 fumarate reductase iron-sulfur subunit YP_002986103.1 511176 R 579405 CDS YP_002986104.1 242237923 8088713 complement(511903..513699) 1 NC_012880.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 513699 8088713 Dd703_0471 Dickeya dadantii Ech703 fumarate reductase flavoprotein subunit YP_002986104.1 511903 R 579405 CDS YP_002986105.1 242237924 8088714 514403..515380 1 NC_012880.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 515380 8088714 Dd703_0472 Dickeya dadantii Ech703 lysyl-tRNA synthetase YP_002986105.1 514403 D 579405 CDS YP_002986106.1 242237925 8088715 complement(515513..518827) 1 NC_012880.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eca:ECA3967 hypothetical protein; hypothetical protein 518827 8088715 Dd703_0473 Dickeya dadantii Ech703 hypothetical protein YP_002986106.1 515513 R 579405 CDS YP_002986107.1 242237926 8088716 complement(518859..519773) 1 NC_012880.1 KEGG: eca:ECA3966 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 519773 8088716 Dd703_0474 Dickeya dadantii Ech703 phosphatidylserine decarboxylase YP_002986107.1 518859 R 579405 CDS YP_002986108.1 242237927 8088717 complement(519842..520891) 1 NC_012880.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 520891 8088717 Dd703_0475 Dickeya dadantii Ech703 ribosome-associated GTPase YP_002986108.1 519842 R 579405 CDS YP_002986109.1 242237928 8088718 521024..521566 1 NC_012880.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: eum:ECUMN_4696 oligoribonuclease; exonuclease RNase T and DNA polymerase III 521566 8088718 Dd703_0476 Dickeya dadantii Ech703 exonuclease RNase T and DNA polymerase III YP_002986109.1 521024 D 579405 CDS YP_002986110.1 242237929 8088801 522107..522913 1 NC_012880.1 KEGG: pen:PSEEN0738 hypothetical protein; hypothetical protein 522913 8088801 Dd703_0477 Dickeya dadantii Ech703 hypothetical protein YP_002986110.1 522107 D 579405 CDS YP_002986111.1 242237930 8088802 522910..524220 1 NC_012880.1 KEGG: pfo:Pfl01_0146 hypothetical protein; hypothetical protein 524220 8088802 Dd703_0478 Dickeya dadantii Ech703 hypothetical protein YP_002986111.1 522910 D 579405 CDS YP_002986112.1 242237931 8088803 524217..526322 1 NC_012880.1 PFAM: peptidase M50; KEGG: pfo:Pfl01_0147 peptidase M50; peptidase M50 526322 8088803 Dd703_0479 Dickeya dadantii Ech703 peptidase M50 YP_002986112.1 524217 D 579405 CDS YP_002986113.1 242237932 8088804 526593..527525 1 NC_012880.1 PFAM: Tail Collar domain protein; KEGG: shn:Shewana3_0167 phage tail collar domain-containing protein; Tail Collar domain-containing protein 527525 8088804 Dd703_0480 Dickeya dadantii Ech703 Tail Collar domain-containing protein YP_002986113.1 526593 D 579405 CDS YP_002986114.1 242237933 8088805 527910..528836 1 NC_012880.1 PFAM: Tail Collar domain protein; KEGG: shw:Sputw3181_3688 phage tail collar domain-containing protein; Tail Collar domain-containing protein 528836 8088805 Dd703_0481 Dickeya dadantii Ech703 Tail Collar domain-containing protein YP_002986114.1 527910 D 579405 CDS YP_002986115.1 242237934 8088806 529088..535486 1 NC_012880.1 PFAM: Ig family protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: hch:HCH_03194 outer membrane protein domain-containing protein; Ig family protein 535486 8088806 Dd703_0482 Dickeya dadantii Ech703 Ig family protein YP_002986115.1 529088 D 579405 CDS YP_002986116.1 242237935 8088807 535548..537056 1 NC_012880.1 PFAM: outer membrane efflux protein; KEGG: ppw:PputW619_0676 outer membrane efflux protein; outer membrane efflux protein 537056 8088807 Dd703_0483 Dickeya dadantii Ech703 outer membrane efflux protein YP_002986116.1 535548 D 579405 CDS YP_002986117.1 242237936 8088808 537662..538882 1 NC_012880.1 TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; aminotransferase class I and II; KEGG: spe:Spro_2844 bifunctional succinylornithine transaminase/acetylornithine transaminase; succinylornithine transaminase family 538882 8088808 Dd703_0484 Dickeya dadantii Ech703 succinylornithine transaminase family YP_002986117.1 537662 D 579405 CDS YP_002986118.1 242237937 8088809 538904..539938 1 NC_012880.1 KEGG: spe:Spro_2843 arginine succinyltransferase; TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; PFAM: arginine N-succinyltransferase subunit beta; arginine succinyltransferase 539938 8088809 Dd703_0485 Dickeya dadantii Ech703 arginine succinyltransferase YP_002986118.1 538904 D 579405 CDS YP_002986119.1 242237938 8088810 539938..541407 1 NC_012880.1 TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: abm:ABSDF0357 succinylglutamic semialdehyde dehydrogenase; succinylglutamic semialdehyde dehydrogenase 541407 8088810 Dd703_0486 Dickeya dadantii Ech703 succinylglutamic semialdehyde dehydrogenase YP_002986119.1 539938 D 579405 CDS YP_002986120.1 242237939 8088811 541433..542782 1 NC_012880.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 542782 8088811 Dd703_0487 Dickeya dadantii Ech703 succinylarginine dihydrolase YP_002986120.1 541433 D 579405 CDS YP_002986121.1 242237940 8088812 542800..543822 1 NC_012880.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 543822 8088812 Dd703_0488 Dickeya dadantii Ech703 succinylglutamate desuccinylase YP_002986121.1 542800 D 579405 CDS YP_002986122.1 242237941 8088813 complement(544120..544602) 1 NC_012880.1 KEGG: sew:SeSA_A4796 P-18 protein; P-18 protein 544602 8088813 Dd703_0489 Dickeya dadantii Ech703 P-18 protein YP_002986122.1 544120 R 579405 CDS YP_002986123.1 242237942 8088814 complement(545209..548721) 1 NC_012880.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2957 pyruvate-flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 548721 8088814 Dd703_0490 Dickeya dadantii Ech703 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002986123.1 545209 R 579405 CDS YP_002986124.1 242237943 8088815 549280..550161 1 NC_012880.1 KEGG: kpe:KPK_1714 nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 550161 8088815 Dd703_0491 Dickeya dadantii Ech703 nitrogenase iron protein YP_002986124.1 549280 D 579405 CDS YP_002986125.1 242237944 8088816 550226..551674 1 NC_012880.1 KEGG: eca:ECA2955 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha 551674 8088816 Dd703_0492 Dickeya dadantii Ech703 nitrogenase molybdenum-iron protein subunit alpha YP_002986125.1 550226 D 579405 CDS YP_002986126.1 242237945 8088817 551745..553313 1 NC_012880.1 KEGG: eca:ECA2954 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 553313 8088817 Dd703_0493 Dickeya dadantii Ech703 nitrogenase molybdenum-iron protein subunit beta YP_002986126.1 551745 D 579405 CDS YP_002986127.1 242237946 8088818 553531..553749 1 NC_012880.1 TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: eca:ECA2953 nitrogen fixation protein; nitrogen fixation protein FixT 553749 8088818 Dd703_0494 Dickeya dadantii Ech703 nitrogen fixation protein FixT YP_002986127.1 553531 D 579405 CDS YP_002986128.1 242237947 8088819 553763..554425 1 NC_012880.1 PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: eca:ECA2952 nitrogen fixation protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 554425 8088819 Dd703_0495 Dickeya dadantii Ech703 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002986128.1 553763 D 579405 CDS YP_002986129.1 242237948 8088820 complement(554464..556056) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: spe:Spro_0463 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 556056 8088820 Dd703_0496 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002986129.1 554464 R 579405 CDS YP_002986130.1 242237949 8088821 556433..557806 1 NC_012880.1 TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; KEGG: eca:ECA2949 nitrogenase iron-molybdenum cofactor biosynthesis protein; nitrogenase MoFe cofactor biosynthesis protein NifE 557806 8088821 Dd703_0497 Dickeya dadantii Ech703 nitrogenase MoFe cofactor biosynthesis protein NifE YP_002986130.1 556433 D 579405 CDS YP_002986131.1 242237950 8088822 557823..559208 1 NC_012880.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 559208 8088822 Dd703_0498 Dickeya dadantii Ech703 nitrogenase molybdenum-cofactor biosynthesis protein NifN YP_002986131.1 557823 D 579405 CDS YP_002986132.1 242237951 8088823 559195..559662 1 NC_012880.1 PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: eca:ECA2947 nitrogen fixation protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 559662 8088823 Dd703_0499 Dickeya dadantii Ech703 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002986132.1 559195 D 579405 CDS YP_002986133.1 242237952 8088824 560039..560716 1 NC_012880.1 hypothetical protein 560716 8088824 Dd703_0500 Dickeya dadantii Ech703 hypothetical protein YP_002986133.1 560039 D 579405 CDS YP_002986134.1 242237953 8088825 561038..561580 1 NC_012880.1 KEGG: rfr:Rfer_1069 hypothetical protein; hypothetical protein 561580 8088825 Dd703_0501 Dickeya dadantii Ech703 hypothetical protein YP_002986134.1 561038 D 579405 CDS YP_002986135.1 242237954 8088826 561623..562186 1 NC_012880.1 KEGG: rfr:Rfer_1070 hypothetical protein; hypothetical protein 562186 8088826 Dd703_0502 Dickeya dadantii Ech703 hypothetical protein YP_002986135.1 561623 D 579405 CDS YP_002986136.1 242237955 8088827 563328..564161 1 NC_012880.1 TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA2946 nitrogen fixation protein; Fe-S cluster assembly protein NifU 564161 8088827 Dd703_0503 Dickeya dadantii Ech703 Fe-S cluster assembly protein NifU YP_002986136.1 563328 D 579405 CDS YP_002986137.1 242237956 8088828 564201..565409 1 NC_012880.1 KEGG: eca:ECA2945 cysteine desulfurase; TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; cysteine desulfurase NifS 565409 8088828 Dd703_0504 Dickeya dadantii Ech703 cysteine desulfurase NifS YP_002986137.1 564201 D 579405 CDS YP_002986138.1 242237957 8088829 565422..566567 1 NC_012880.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: eca:ECA2944 homocitrate synthase; homocitrate synthase 566567 8088829 Dd703_0505 Dickeya dadantii Ech703 homocitrate synthase YP_002986138.1 565422 D 579405 CDS YP_002986139.1 242237958 8088830 566571..566828 1 NC_012880.1 KEGG: eca:ECA2943 nitrogenase stabilizing/protective protein; nitrogenase stabilizing/protective protein 566828 8088830 Dd703_0506 Dickeya dadantii Ech703 nitrogenase stabilizing/protective protein YP_002986139.1 566571 D 579405 CDS YP_002986140.1 242237959 8088831 566825..567265 1 NC_012880.1 PFAM: NifZ family protein; KEGG: eca:ECA2942 nitrogen fixation protein; NifZ family protein 567265 8088831 Dd703_0507 Dickeya dadantii Ech703 NifZ family protein YP_002986140.1 566825 D 579405 CDS YP_002986141.1 242237960 8088832 567262..568101 1 NC_012880.1 TIGRFAM: nitrogen fixation protein NifM; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eca:ECA2941 nitrogen fixation protein; nitrogen fixation protein NifM 568101 8088832 Dd703_0508 Dickeya dadantii Ech703 nitrogen fixation protein NifM YP_002986141.1 567262 D 579405 CDS YP_002986142.1 242237961 8088833 complement(568205..568621) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_3129 acetyltransferase; N-acetyltransferase GCN5 568621 8088833 Dd703_0509 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002986142.1 568205 R 579405 CDS YP_002986143.1 242237962 8088834 complement(568737..569267) 1 NC_012880.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 569267 8088834 Dd703_0510 Dickeya dadantii Ech703 flavodoxin FldA YP_002986143.1 568737 R 579405 CDS YP_002986144.1 242237963 8088835 569647..571134 1 NC_012880.1 KEGG: eca:ECA2939 nitrogen fixation regulatory protein; TIGRFAM: nitrogen fixation negative regulator NifL; PAS sensor protein; PFAM: PAS fold domain protein; hypothetical protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor protein 571134 8088835 Dd703_0511 Dickeya dadantii Ech703 PAS/PAC sensor protein YP_002986144.1 569647 D 579405 CDS YP_002986145.1 242237964 8088836 571131..572705 1 NC_012880.1 KEGG: eca:ECA2938 nif-specific regulatory protein; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase AAA; SMART: GAF domain protein; ATPase AAA; Fis Family transcriptional regulator NifA 572705 8088836 Dd703_0512 Dickeya dadantii Ech703 Fis Family transcriptional regulator NifA YP_002986145.1 571131 D 579405 CDS YP_002986146.1 242237965 8088837 572964..574370 1 NC_012880.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; radical SAM protein; KEGG: eca:ECA2937 femo cofactor biosynthesis protein; nitrogenase cofactor biosynthesis protein NifB 574370 8088837 Dd703_0513 Dickeya dadantii Ech703 nitrogenase cofactor biosynthesis protein NifB YP_002986146.1 572964 D 579405 CDS YP_002986147.1 242237966 8088838 574370..574882 1 NC_012880.1 PFAM: NifQ family protein; KEGG: eca:ECA2936 nitrogen fixation protein; NifQ family protein 574882 8088838 Dd703_0514 Dickeya dadantii Ech703 NifQ family protein YP_002986147.1 574370 D 579405 CDS YP_002986148.1 242237967 8088839 complement(574936..575832) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4199 DNA-binding transcriptional regulator; DNA-binding transcriptional regulator 575832 8088839 Dd703_0515 Dickeya dadantii Ech703 DNA-binding transcriptional regulator YP_002986148.1 574936 R 579405 CDS YP_002986149.1 242237968 8088840 576006..577331 1 NC_012880.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: spe:Spro_4200 amidohydrolase; amidohydrolase 577331 8088840 Dd703_0516 Dickeya dadantii Ech703 amidohydrolase YP_002986149.1 576006 D 579405 CDS YP_002986150.1 242237969 8088841 577334..578785 1 NC_012880.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: spe:Spro_4201 amidohydrolase; amidohydrolase 578785 8088841 Dd703_0517 Dickeya dadantii Ech703 amidohydrolase YP_002986150.1 577334 D 579405 CDS YP_002986151.1 242237970 8088842 578929..580452 1 NC_012880.1 TIGRFAM: AbgT transporter family; PFAM: AbgT transporter; KEGG: spe:Spro_4202 aminobenzoyl-glutamate transporter; aminobenzoyl-glutamate transporter 580452 abgT 8088842 abgT Dickeya dadantii Ech703 aminobenzoyl-glutamate transporter YP_002986151.1 578929 D 579405 CDS YP_002986152.1 242237971 8088843 580606..581079 1 NC_012880.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: eca:ECA3168 transcriptional regulator of organic hydroperoxide resistance gene ohr; MarR family transcriptional regulator 581079 8088843 Dd703_0519 Dickeya dadantii Ech703 MarR family transcriptional regulator YP_002986152.1 580606 D 579405 CDS YP_002986153.1 242237972 8088844 581221..581646 1 NC_012880.1 PFAM: OsmC family protein; KEGG: eca:ECA3167 organic hydroperoxide resistance protein; OsmC family protein 581646 8088844 Dd703_0520 Dickeya dadantii Ech703 OsmC family protein YP_002986153.1 581221 D 579405 CDS YP_002986154.1 242237973 8088845 complement(581777..582595) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2153 ABC transporter ATP-binding protein; ABC transporter 582595 8088845 Dd703_0521 Dickeya dadantii Ech703 ABC transporter YP_002986154.1 581777 R 579405 CDS YP_002986155.1 242237974 8088846 complement(582613..583533) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2154 ABC transporter permease; polar amino acid ABC transporter permease 583533 8088846 Dd703_0522 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002986155.1 582613 R 579405 CDS YP_002986156.1 242237975 8088847 complement(583530..584090) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2155 acetyltransferase; N-acetyltransferase GCN5 584090 8088847 Dd703_0523 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002986156.1 583530 R 579405 CDS YP_002986157.1 242237976 8088848 complement(584104..585051) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA2156 ABC transporter substrate-binding protein; family 3 extracellular solute-binding protein 585051 8088848 Dd703_0524 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002986157.1 584104 R 579405 CDS YP_002986158.1 242237977 8088849 complement(585106..586023) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA2157 ABC transporter substrate-binding protein; family 3 extracellular solute-binding protein 586023 8088849 Dd703_0525 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002986158.1 585106 R 579405 CDS YP_002986159.1 242237978 8088850 complement(586020..587375) 1 NC_012880.1 KEGG: eca:ECA2158 hypothetical protein; hypothetical protein 587375 8088850 Dd703_0526 Dickeya dadantii Ech703 hypothetical protein YP_002986159.1 586020 R 579405 CDS YP_002986160.1 242237979 8088851 587958..588986 1 NC_012880.1 PFAM: Luciferase-like monooxygenase; KEGG: eca:ECA2161 luciferase-like monooxygenase; luciferase-like monooxygenase 588986 8088851 Dd703_0527 Dickeya dadantii Ech703 luciferase-like monooxygenase YP_002986160.1 587958 D 579405 CDS YP_002986161.1 242237980 8088853 589386..590312 1 NC_012880.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: eca:ECA3947 D-isomer specific 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 590312 8088853 Dd703_0528 Dickeya dadantii Ech703 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_002986161.1 589386 D 579405 CDS YP_002986162.1 242237981 8088855 complement(590887..592026) 1 NC_012880.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: eca:ECA3940 4Fe-4S binding protein; iron-sulfur cluster binding protein 592026 8088855 Dd703_0529 Dickeya dadantii Ech703 iron-sulfur cluster binding protein YP_002986162.1 590887 R 579405 CDS YP_002986163.1 242237982 8088856 592043..593554 1 NC_012880.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: eca:ECA3939 hypothetical protein; hypothetical protein 593554 8088856 Dd703_0530 Dickeya dadantii Ech703 hypothetical protein YP_002986163.1 592043 D 579405 CDS YP_002986164.1 242237983 8088857 593551..594024 1 NC_012880.1 PFAM: protein of unknown function UPF0079; KEGG: spe:Spro_0427 ATPase; hypothetical protein 594024 8088857 Dd703_0531 Dickeya dadantii Ech703 hypothetical protein YP_002986164.1 593551 D 579405 CDS YP_002986165.1 242237984 8088858 594036..595727 1 NC_012880.1 PFAM: cell wall hydrolase/autolysin; peptidoglycan-binding LysM; SMART: cell wall hydrolase/autolysin; peptidoglycan-binding LysM; KEGG: eca:ECA3937 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 595727 8088858 Dd703_0532 Dickeya dadantii Ech703 cell wall hydrolase/autolysin YP_002986165.1 594036 D 579405 CDS YP_002986166.1 242237985 8088859 595768..597657 1 NC_012880.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 597657 mutL 8088859 mutL Dickeya dadantii Ech703 DNA mismatch repair protein YP_002986166.1 595768 D 579405 CDS YP_002986167.1 242237986 8088860 597650..598591 1 NC_012880.1 KEGG: eca:ECA3935 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 598591 8088860 Dd703_0534 Dickeya dadantii Ech703 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002986167.1 597650 D 579405 CDS YP_002986168.1 242237987 8088861 598703..599002 1 NC_012880.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 599002 hfq 8088861 hfq Dickeya dadantii Ech703 RNA-binding protein Hfq YP_002986168.1 598703 D 579405 CDS YP_002986169.1 242237988 8088862 599094..600374 1 NC_012880.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX 600374 8088862 Dd703_0536 Dickeya dadantii Ech703 GTPase HflX YP_002986169.1 599094 D 579405 CDS YP_002986170.1 242237989 8088863 600447..601703 1 NC_012880.1 KEGG: eca:ECA3932 FtsH protease regulator HflK; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein 601703 8088863 Dd703_0537 Dickeya dadantii Ech703 HflK protein YP_002986170.1 600447 D 579405 CDS YP_002986171.1 242237990 8088864 601706..602701 1 NC_012880.1 with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 602701 8088864 Dd703_0538 Dickeya dadantii Ech703 FtsH protease regulator HflC YP_002986171.1 601706 D 579405 CDS YP_002986172.1 242237991 8088865 602760..602960 1 NC_012880.1 KEGG: eca:ECA3930 hypothetical protein; hypothetical protein 602960 8088865 Dd703_0539 Dickeya dadantii Ech703 hypothetical protein YP_002986172.1 602760 D 579405 CDS YP_002986173.1 242237992 8088866 603061..604359 1 NC_012880.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 604359 8088866 Dd703_0540 Dickeya dadantii Ech703 adenylosuccinate synthetase YP_002986173.1 603061 D 579405 CDS YP_002986174.1 242237993 8088867 complement(604428..605810) 1 NC_012880.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: eca:ECA3928 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 605810 8088867 Dd703_0541 Dickeya dadantii Ech703 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_002986174.1 604428 R 579405 CDS YP_002986175.1 242237994 8088868 605981..606985 1 NC_012880.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 606985 8088868 Dd703_0542 Dickeya dadantii Ech703 fructose-1,6-bisphosphatase YP_002986175.1 605981 D 579405 CDS YP_002986176.1 242237995 8088869 complement(607078..607497) 1 NC_012880.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 607497 8088869 Dd703_0543 Dickeya dadantii Ech703 Holliday junction resolvase-like protein YP_002986176.1 607078 R 579405 CDS YP_002986177.1 242237996 8088870 complement(607497..608090) 1 NC_012880.1 PFAM: protein of unknown function DUF179; KEGG: eca:ECA3925 hypothetical protein; hypothetical protein 608090 8088870 Dd703_0544 Dickeya dadantii Ech703 hypothetical protein YP_002986177.1 607497 R 579405 CDS YP_002986178.1 242237997 8088871 complement(608151..609104) 1 NC_012880.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 609104 8088871 Dd703_0545 Dickeya dadantii Ech703 glutathione synthetase YP_002986178.1 608151 R 579405 CDS YP_002986179.1 242237998 8088872 complement(609116..609850) 1 NC_012880.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 609850 8088872 Dd703_0546 Dickeya dadantii Ech703 16S ribosomal RNA methyltransferase RsmE YP_002986179.1 609116 R 579405 CDS YP_002986180.1 242237999 8088873 complement(609963..610661) 1 NC_012880.1 PFAM: endonuclease I; KEGG: esa:ESA_00397 hypothetical protein; deoxyribonuclease I 610661 8088873 Dd703_0547 Dickeya dadantii Ech703 deoxyribonuclease I YP_002986180.1 609963 R 579405 CDS YP_002986181.1 242238000 8088874 complement(610762..611274) 1 NC_012880.1 PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: eca:ECA3921 hypothetical protein; hypothetical protein 611274 8088874 Dd703_0548 Dickeya dadantii Ech703 hypothetical protein YP_002986181.1 610762 R 579405 CDS YP_002986182.1 242238001 8088875 complement(611547..612701) 1 NC_012880.1 KEGG: ypg:YpAngola_A3347 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 612701 8088875 Dd703_0549 Dickeya dadantii Ech703 S-adenosylmethionine synthetase YP_002986182.1 611547 R 579405 CDS YP_002986183.1 242238002 8088876 613400..615373 1 NC_012880.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 615373 8088876 Dd703_0550 Dickeya dadantii Ech703 arginine decarboxylase YP_002986183.1 613400 D 579405 CDS YP_002986184.1 242238003 8088877 615789..616985 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4593 hypothetical protein; hypothetical protein 616985 8088877 Dd703_0551 Dickeya dadantii Ech703 hypothetical protein YP_002986184.1 615789 D 579405 CDS YP_002986185.1 242238004 8088878 617593..619587 1 NC_012880.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: eca:ECA0861 transketolase; transketolase 619587 8088878 Dd703_0552 Dickeya dadantii Ech703 transketolase YP_002986185.1 617593 D 579405 CDS YP_002986186.1 242238005 8088879 619893..620909 1 NC_012880.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 620909 8088879 Dd703_0553 Dickeya dadantii Ech703 erythrose 4-phosphate dehydrogenase YP_002986186.1 619893 D 579405 CDS YP_002986187.1 242238006 8088880 620977..622140 1 NC_012880.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 622140 pgk 8088880 pgk Dickeya dadantii Ech703 phosphoglycerate kinase YP_002986187.1 620977 D 579405 CDS YP_002986188.1 242238007 8088962 622259..623335 1 NC_012880.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 623335 8088962 Dd703_0555 Dickeya dadantii Ech703 fructose-bisphosphate aldolase YP_002986188.1 622259 D 579405 CDS YP_002986189.1 242238008 8088963 623459..624340 1 NC_012880.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: eca:ECA3910 mechanosensitive ion channel; mechanosensitive ion channel MscS 624340 8088963 Dd703_0556 Dickeya dadantii Ech703 mechanosensitive ion channel MscS YP_002986189.1 623459 D 579405 CDS YP_002986190.1 242238009 8088964 624506..625120 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: efe:EFER_2855 arginine transporter; lysine exporter protein LysE/YggA 625120 8088964 Dd703_0557 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002986190.1 624506 D 579405 CDS YP_002986191.1 242238010 8088965 625256..625984 1 NC_012880.1 PFAM: protein of unknown function DUF541; KEGG: eca:ECA3908 hypothetical protein; hypothetical protein 625984 8088965 Dd703_0558 Dickeya dadantii Ech703 hypothetical protein YP_002986191.1 625256 D 579405 CDS YP_002986192.1 242238011 8088966 complement(626041..626934) 1 NC_012880.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 626934 8088966 Dd703_0559 Dickeya dadantii Ech703 chromosome replication initiation inhibitor protein YP_002986192.1 626041 R 579405 CDS YP_002986193.1 242238012 8088967 627129..627791 1 NC_012880.1 KEGG: eca:ECA3906 ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 627791 8088967 Dd703_0560 Dickeya dadantii Ech703 ribose 5-phosphate isomerase YP_002986193.1 627129 D 579405 CDS YP_002986194.1 242238013 8088968 628096..629328 1 NC_012880.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 629328 8088968 Dd703_0561 Dickeya dadantii Ech703 D-3-phosphoglycerate dehydrogenase YP_002986194.1 628096 D 579405 CDS YP_002986195.1 242238014 8088969 629861..631573 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3902 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 631573 8088969 Dd703_0562 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002986195.1 629861 D 579405 CDS YP_002986196.1 242238015 8088970 complement(631745..633463) 1 NC_012880.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 633463 8088970 Dd703_0563 Dickeya dadantii Ech703 ABC transporter ATP-binding protein YP_002986196.1 631745 R 579405 CDS YP_002986197.1 242238016 8088971 633844..635775 1 NC_012880.1 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 635775 8088971 Dd703_0564 Dickeya dadantii Ech703 lytic murein transglycosylase YP_002986197.1 633844 D 579405 CDS YP_002986198.1 242238017 8088972 635932..636264 1 NC_012880.1 TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: eca:ECA3899 Trp operon repressor; Trp operon repressor 636264 8088972 Dd703_0565 Dickeya dadantii Ech703 Trp operon repressor YP_002986198.1 635932 D 579405 CDS YP_002986199.1 242238018 8088973 complement(636277..636816) 1 NC_012880.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 636816 8088973 Dd703_0566 Dickeya dadantii Ech703 NTPase YP_002986199.1 636277 R 579405 CDS YP_002986200.1 242238019 8088974 636868..637518 1 NC_012880.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 637518 8088974 Dd703_0567 Dickeya dadantii Ech703 phosphoglycerate mutase YP_002986200.1 636868 D 579405 CDS YP_002986201.1 242238020 8088975 complement(637515..638396) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA3896 right origin-binding protein; AraC family transcriptional regulator 638396 8088975 Dd703_0568 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986201.1 637515 R 579405 CDS YP_002986202.1 242238021 8088976 638599..639084 1 NC_012880.1 PFAM: CreA family protein; KEGG: eca:ECA3894 hypothetical protein; hypothetical protein 639084 8088976 Dd703_0569 Dickeya dadantii Ech703 hypothetical protein YP_002986202.1 638599 D 579405 CDS YP_002986203.1 242238022 8088977 complement(639145..639861) 1 NC_012880.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA3893 two-component response regulator; two-component response regulator 639861 8088977 Dd703_0570 Dickeya dadantii Ech703 two-component response regulator YP_002986203.1 639145 R 579405 CDS YP_002986204.1 242238023 8088978 640474..641172 1 NC_012880.1 member of the SPOUT superfamily of methyltransferases; RNA methyltransferase 641172 8088978 Dd703_0571 Dickeya dadantii Ech703 RNA methyltransferase YP_002986204.1 640474 D 579405 CDS YP_002986205.1 242238024 8088979 641600..644056 1 NC_012880.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 644056 thrA 8088979 thrA Dickeya dadantii Ech703 bifunctional aspartokinase I/homoserine dehydrogenase I YP_002986205.1 641600 D 579405 CDS YP_002986206.1 242238025 8088980 644059..644988 1 NC_012880.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 644988 8088980 Dd703_0573 Dickeya dadantii Ech703 homoserine kinase YP_002986206.1 644059 D 579405 CDS YP_002986207.1 242238026 8088981 644992..646281 1 NC_012880.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 646281 8088981 Dd703_0574 Dickeya dadantii Ech703 threonine synthase YP_002986207.1 644992 D 579405 CDS YP_002986208.1 242238027 8088982 complement(646446..647219) 1 NC_012880.1 PFAM: protein of unknown function DUF328; KEGG: eca:ECA3888 hypothetical protein; hypothetical protein 647219 8088982 Dd703_0575 Dickeya dadantii Ech703 hypothetical protein YP_002986208.1 646446 R 579405 CDS YP_002986209.1 242238028 8088983 647522..648475 1 NC_012880.1 KEGG: eca:ECA3887 transaldolase B; TIGRFAM: transaldolase; PFAM: transaldolase; transaldolase B 648475 8088983 Dd703_0576 Dickeya dadantii Ech703 transaldolase B YP_002986209.1 647522 D 579405 CDS YP_002986210.1 242238029 8088984 complement(648501..649637) 1 NC_012880.1 KEGG: eca:ECA3886 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 649637 8088984 Dd703_0577 Dickeya dadantii Ech703 diguanylate cyclase YP_002986210.1 648501 R 579405 CDS YP_002986211.1 242238030 8088985 649913..650500 1 NC_012880.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 650500 mogA 8088985 mogA Dickeya dadantii Ech703 molybdenum cofactor biosynthesis protein MogA YP_002986211.1 649913 D 579405 CDS YP_002986212.1 242238031 8088986 650629..651942 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: spe:Spro_0690 major facilitator transporter; major facilitator superfamily protein 651942 8088986 Dd703_0579 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986212.1 650629 D 579405 CDS YP_002986213.1 242238032 8088987 complement(652121..652693) 1 NC_012880.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: eca:ECA3883 hypothetical protein; hypothetical protein 652693 8088987 Dd703_0580 Dickeya dadantii Ech703 hypothetical protein YP_002986213.1 652121 R 579405 CDS YP_002986214.1 242238033 8088988 653027..654946 1 NC_012880.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 654946 dnaK 8088988 dnaK Dickeya dadantii Ech703 molecular chaperone DnaK YP_002986214.1 653027 D 579405 CDS YP_002986215.1 242238034 8088989 655057..656190 1 NC_012880.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 656190 8088989 Dd703_0582 Dickeya dadantii Ech703 chaperone protein DnaJ YP_002986215.1 655057 D 579405 CDS YP_002986216.1 242238035 8088990 656623..657801 1 NC_012880.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 657801 nhaA 8088990 nhaA Dickeya dadantii Ech703 pH-dependent sodium/proton antiporter YP_002986216.1 656623 D 579405 CDS YP_002986217.1 242238036 8088991 657812..658699 1 NC_012880.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 658699 nhaR 8088991 nhaR Dickeya dadantii Ech703 transcriptional activator NhaR YP_002986217.1 657812 D 579405 CDS YP_002986218.1 242238037 8088992 complement(658757..659020) 1 NC_012880.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 659020 rpsT 8088992 rpsT Dickeya dadantii Ech703 30S ribosomal protein S20 YP_002986218.1 658757 R 579405 CDS YP_002986219.1 242238038 8088993 659416..660357 1 NC_012880.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 660357 8088993 Dd703_0586 Dickeya dadantii Ech703 bifunctional riboflavin kinase/FMN adenylyltransferase YP_002986219.1 659416 D 579405 CDS YP_002986220.1 242238039 8088994 660390..663212 1 NC_012880.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 663212 ileS 8088994 ileS Dickeya dadantii Ech703 isoleucyl-tRNA synthetase YP_002986220.1 660390 D 579405 CDS YP_002986221.1 242238040 8088995 663212..663718 1 NC_012880.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 663718 lspA 8088995 lspA Dickeya dadantii Ech703 lipoprotein signal peptidase YP_002986221.1 663212 D 579405 CDS YP_002986222.1 242238041 8088996 663722..664180 1 NC_012880.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: eca:ECA3874 FkbP-type 16 kDa peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 664180 8088996 Dd703_0589 Dickeya dadantii Ech703 FKBP-type peptidylprolyl isomerase YP_002986222.1 663722 D 579405 CDS YP_002986223.1 242238042 8088997 664177..665127 1 NC_012880.1 KEGG: eca:ECA3873 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 665127 8088997 Dd703_0590 Dickeya dadantii Ech703 hydroxymethylbutenyl pyrophosphate reductase YP_002986223.1 664177 D 579405 CDS YP_002986224.1 242238043 8088998 665387..666208 1 NC_012880.1 KEGG: eca:ECA3872 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 666208 8088998 Dd703_0591 Dickeya dadantii Ech703 dihydrodipicolinate reductase YP_002986224.1 665387 D 579405 CDS YP_002986225.1 242238044 8088999 666666..667814 1 NC_012880.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: yen:YE0621 carbamoyl phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit 667814 8088999 Dd703_0592 Dickeya dadantii Ech703 carbamoyl-phosphate synthase small subunit YP_002986225.1 666666 D 579405 CDS YP_002986226.1 242238045 8089000 667902..671126 1 NC_012880.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 671126 carB 8089000 carB Dickeya dadantii Ech703 carbamoyl phosphate synthase large subunit YP_002986226.1 667902 D 579405 CDS YP_002986227.1 242238046 8089001 complement(671201..672004) 1 NC_012880.1 KEGG: ent:Ent638_0389 hypothetical protein; hypothetical protein 672004 8089001 Dd703_0594 Dickeya dadantii Ech703 hypothetical protein YP_002986227.1 671201 R 579405 CDS YP_002986228.1 242238047 8089002 complement(672017..672163) 1 NC_012880.1 hypothetical protein 672163 8089002 Dd703_0595 Dickeya dadantii Ech703 hypothetical protein YP_002986228.1 672017 R 579405 CDS YP_002986229.1 242238048 8089003 complement(672332..673024) 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: spe:Spro_0717 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 673024 8089003 Dd703_0596 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002986229.1 672332 R 579405 CDS YP_002986230.1 242238049 8089004 673109..673885 1 NC_012880.1 PFAM: protein of unknown function DUF1212; KEGG: eca:ECA3866 hypothetical protein; hypothetical protein 673885 8089004 Dd703_0597 Dickeya dadantii Ech703 hypothetical protein YP_002986230.1 673109 D 579405 CDS YP_002986231.1 242238050 8089005 673876..674346 1 NC_012880.1 KEGG: eca:ECA3865 hypothetical protein; hypothetical protein 674346 8089005 Dd703_0598 Dickeya dadantii Ech703 hypothetical protein YP_002986231.1 673876 D 579405 CDS YP_002986232.1 242238051 8089006 674712..675209 1 NC_012880.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 675209 folA 8089006 folA Dickeya dadantii Ech703 dihydrofolate reductase YP_002986232.1 674712 D 579405 CDS YP_002986233.1 242238052 8089007 complement(675260..676102) 1 NC_012880.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 676102 apaH 8089007 apaH Dickeya dadantii Ech703 diadenosine tetraphosphatase YP_002986233.1 675260 R 579405 CDS YP_002986234.1 242238053 8089008 complement(676109..676486) 1 NC_012880.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 676486 apaG 8089008 apaG Dickeya dadantii Ech703 ApaG protein YP_002986234.1 676109 R 579405 CDS YP_002986235.1 242238054 8089009 complement(676502..677320) 1 NC_012880.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 677320 ksgA 8089009 ksgA Dickeya dadantii Ech703 dimethyladenosine transferase YP_002986235.1 676502 R 579405 CDS YP_002986236.1 242238055 8089010 complement(677313..678314) 1 NC_012880.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 678314 pdxA 8089010 pdxA Dickeya dadantii Ech703 4-hydroxythreonine-4-phosphate dehydrogenase YP_002986236.1 677313 R 579405 CDS YP_002986237.1 242238056 8089011 complement(678314..679615) 1 NC_012880.1 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA 679615 8089011 Dd703_0604 Dickeya dadantii Ech703 peptidyl-prolyl cis-trans isomerase SurA YP_002986237.1 678314 R 579405 CDS YP_002986238.1 242238057 8089012 complement(679714..682113) 1 NC_012880.1 determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 682113 8089012 Dd703_0605 Dickeya dadantii Ech703 organic solvent tolerance protein YP_002986238.1 679714 R 579405 CDS YP_002986239.1 242238058 8089013 682263..683180 1 NC_012880.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 683180 djlA 8089013 djlA Dickeya dadantii Ech703 Dna-J like membrane chaperone protein YP_002986239.1 682263 D 579405 CDS YP_002986240.1 242238059 8089014 complement(683230..683883) 1 NC_012880.1 PFAM: pseudouridine synthase; KEGG: eca:ECA3854 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase 683883 8089014 Dd703_0607 Dickeya dadantii Ech703 pseudouridine synthase YP_002986240.1 683230 R 579405 CDS YP_002986241.1 242238060 8089015 complement(683937..686840) 1 NC_012880.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 686840 8089015 Dd703_0608 Dickeya dadantii Ech703 ATP-dependent helicase HepA YP_002986241.1 683937 R 579405 CDS YP_002986242.1 242238061 8089016 complement(687204..689576) 1 NC_012880.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 689576 8089016 Dd703_0609 Dickeya dadantii Ech703 DNA polymerase II YP_002986242.1 687204 R 579405 CDS YP_002986243.1 242238062 8089017 690333..691469 1 NC_012880.1 PFAM: extracellular ligand-binding receptor; KEGG: kpe:KPK_4384 branched-chain amino acid ABC transporter periplasmic amino acid-binding protein; extracellular ligand-binding receptor 691469 8089017 Dd703_0610 Dickeya dadantii Ech703 extracellular ligand-binding receptor YP_002986243.1 690333 D 579405 CDS YP_002986244.1 242238063 8089018 691598..692500 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: kpe:KPK_4385 branched-chain amino acid ABC transporter permease; inner-membrane translocator 692500 8089018 Dd703_0611 Dickeya dadantii Ech703 inner-membrane translocator YP_002986244.1 691598 D 579405 CDS YP_002986245.1 242238064 8089019 692500..693543 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: kpe:KPK_4386 branched-chain amino acid ABC transporter permease; inner-membrane translocator 693543 8089019 Dd703_0612 Dickeya dadantii Ech703 inner-membrane translocator YP_002986245.1 692500 D 579405 CDS YP_002986246.1 242238065 8089020 693533..694312 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpn:KPN_00302 ATP-binding component of high-affinity branched-chain amino acid transporter; ABC transporter 694312 8089020 Dd703_0613 Dickeya dadantii Ech703 ABC transporter YP_002986246.1 693533 D 579405 CDS YP_002986247.1 242238066 8089021 694305..695000 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpn:KPN_00301 ATP-binding component of leucine transport; ABC transporter 695000 8089021 Dd703_0614 Dickeya dadantii Ech703 ABC transporter YP_002986247.1 694305 D 579405 CDS YP_002986248.1 242238067 8089022 695528..696295 1 NC_012880.1 PFAM: SNARE associated Golgi protein; KEGG: eca:ECA3850 hypothetical protein; hypothetical protein 696295 8089022 Dd703_0615 Dickeya dadantii Ech703 hypothetical protein YP_002986248.1 695528 D 579405 CDS YP_002986249.1 242238068 8089023 complement(696302..697264) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet1343 LysR family transcriptional regulator; LysR family transcriptional regulator 697264 8089023 Dd703_0616 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986249.1 696302 R 579405 CDS YP_002986250.1 242238069 8089024 697332..697964 1 NC_012880.1 PFAM: threonyl/alanyl tRNA synthetase SAD; KEGG: spe:Spro_3159 threonyl/alanyl tRNA synthetase SAD; threonyl/alanyl tRNA synthetase SAD 697964 8089024 Dd703_0617 Dickeya dadantii Ech703 threonyl/alanyl tRNA synthetase SAD YP_002986250.1 697332 D 579405 CDS YP_002986251.1 242238070 8089025 698119..698754 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: plu:plu1236 hypothetical protein; lysine exporter protein LysE/YggA 698754 8089025 Dd703_0618 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002986251.1 698119 D 579405 CDS YP_002986252.1 242238071 8089026 complement(698859..699155) 1 NC_012880.1 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit 699155 8089026 Dd703_0619 Dickeya dadantii Ech703 acetolactate synthase 1 regulatory subunit YP_002986252.1 698859 R 579405 CDS YP_002986253.1 242238072 8089027 complement(699160..700824) 1 NC_012880.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: eca:ECA3848 acetolactate synthase catalytic subunit; acetolactate synthase catalytic subunit 700824 8089027 Dd703_0620 Dickeya dadantii Ech703 acetolactate synthase catalytic subunit YP_002986253.1 699160 R 579405 CDS YP_002986254.1 242238073 8089028 complement(701145..701858) 1 NC_012880.1 with TbpA and ThiP is part of the thiamine and TPP transporter; thiamine transporter ATP-binding subunit 701858 thiQ 8089028 thiQ Dickeya dadantii Ech703 thiamine transporter ATP-binding subunit YP_002986254.1 701145 R 579405 CDS YP_002986255.1 242238074 8089029 complement(701842..703452) 1 NC_012880.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 703452 thiP 8089029 thiP Dickeya dadantii Ech703 thiamine transporter membrane protein YP_002986255.1 701842 R 579405 CDS YP_002986256.1 242238075 8089030 complement(703428..704411) 1 NC_012880.1 part of the thiamine and TPP transporter tbpA-thiPQ; thiamine transporter substrate binding subunit 704411 tbpA 8089030 tbpA Dickeya dadantii Ech703 thiamine transporter substrate binding subunit YP_002986256.1 703428 R 579405 CDS YP_002986257.1 242238076 8089031 complement(704670..706331) 1 NC_012880.1 activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR 706331 8089031 Dd703_0624 Dickeya dadantii Ech703 transcriptional regulator SgrR YP_002986257.1 704670 R 579405 CDS YP_002986258.1 242238077 8089032 706430..706588 1 NC_012880.1 hypothetical protein 706588 8089032 Dd703_0625 Dickeya dadantii Ech703 hypothetical protein YP_002986258.1 706430 D 579405 CDS YP_002986259.1 242238078 8089033 complement(706768..708168) 1 NC_012880.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 708168 tnaA 8089033 tnaA Dickeya dadantii Ech703 tryptophanase YP_002986259.1 706768 R 579405 CDS YP_002986260.1 242238079 8089034 complement(708262..708372) 1 NC_012880.1 TIGRFAM: tryptophanase leader peptide; tryptophanase leader peptide 708372 8089034 Dd703_0627 Dickeya dadantii Ech703 tryptophanase leader peptide YP_002986260.1 708262 R 579405 CDS YP_002986261.1 242238080 8089035 708581..709480 1 NC_012880.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: cko:CKO_00978 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein 709480 8089035 Dd703_0628 Dickeya dadantii Ech703 FAD-binding 9 siderophore-interacting domain-containing protein YP_002986261.1 708581 D 579405 CDS YP_002986262.1 242238081 8089036 complement(709534..710136) 1 NC_012880.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 710136 leuD 8089036 leuD Dickeya dadantii Ech703 isopropylmalate isomerase small subunit YP_002986262.1 709534 R 579405 CDS YP_002986263.1 242238082 8089037 complement(710148..711548) 1 NC_012880.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: eca:ECA3833 isopropylmalate isomerase large subunit; 3-isopropylmalate dehydratase large subunit 711548 8089037 Dd703_0630 Dickeya dadantii Ech703 3-isopropylmalate dehydratase large subunit YP_002986263.1 710148 R 579405 CDS YP_002986264.1 242238083 8089038 complement(711551..712642) 1 NC_012880.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 712642 8089038 Dd703_0631 Dickeya dadantii Ech703 3-isopropylmalate dehydrogenase YP_002986264.1 711551 R 579405 CDS YP_002986265.1 242238084 8089039 complement(712642..714219) 1 NC_012880.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 714219 8089039 Dd703_0632 Dickeya dadantii Ech703 2-isopropylmalate synthase YP_002986265.1 712642 R 579405 CDS YP_002986266.1 242238085 8089040 714624..716429 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA3830 AMP-binding protein; AMP-dependent synthetase and ligase 716429 8089040 Dd703_0633 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002986266.1 714624 D 579405 CDS YP_002986267.1 242238086 8089041 716715..718436 1 NC_012880.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 718436 8089041 Dd703_0634 Dickeya dadantii Ech703 acetolactate synthase 3 catalytic subunit YP_002986267.1 716715 D 579405 CDS YP_002986268.1 242238087 8089042 718439..718930 1 NC_012880.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 718930 ilvH 8089042 ilvH Dickeya dadantii Ech703 acetolactate synthase 3 regulatory subunit YP_002986268.1 718439 D 579405 CDS YP_002986269.1 242238088 8089043 719157..720161 1 NC_012880.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 720161 8089043 Dd703_0636 Dickeya dadantii Ech703 DNA-binding transcriptional regulator FruR YP_002986269.1 719157 D 579405 CDS YP_002986270.1 242238089 8089044 complement(720262..720723) 1 NC_012880.1 PFAM: protein of unknown function DUF1144; KEGG: eca:ECA3826 hypothetical protein; hypothetical protein 720723 8089044 Dd703_0637 Dickeya dadantii Ech703 hypothetical protein YP_002986270.1 720262 R 579405 CDS YP_002986271.1 242238090 8089045 720998..721129 1 NC_012880.1 hypothetical protein 721129 8089045 Dd703_0638 Dickeya dadantii Ech703 hypothetical protein YP_002986271.1 720998 D 579405 CDS YP_002986272.1 242238091 8089046 721589..722047 1 NC_012880.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 722047 8089046 Dd703_0639 Dickeya dadantii Ech703 cell division protein MraZ YP_002986272.1 721589 D 579405 CDS YP_002986273.1 242238092 8089047 722050..722991 1 NC_012880.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: eca:ECA3823 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 722991 mraW 8089047 mraW Dickeya dadantii Ech703 S-adenosyl-methyltransferase MraW YP_002986273.1 722050 D 579405 CDS YP_002986274.1 242238093 8089048 722988..723311 1 NC_012880.1 membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 723311 8089048 Dd703_0641 Dickeya dadantii Ech703 cell division protein FtsL YP_002986274.1 722988 D 579405 CDS YP_002986275.1 242238094 8089049 723333..725096 1 NC_012880.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: eca:ECA3821 peptidoglycan synthetase; peptidoglycan glycosyltransferase 725096 8089049 Dd703_0642 Dickeya dadantii Ech703 peptidoglycan glycosyltransferase YP_002986275.1 723333 D 579405 CDS YP_002986276.1 242238095 8089050 725083..726567 1 NC_012880.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 726567 murE 8089050 murE Dickeya dadantii Ech703 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002986276.1 725083 D 579405 CDS YP_002986277.1 242238096 8089051 726564..727925 1 NC_012880.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: eca:ECA3819 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 727925 murF 8089051 murF Dickeya dadantii Ech703 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_002986277.1 726564 D 579405 CDS YP_002986278.1 242238097 8089052 727919..729001 1 NC_012880.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 729001 mraY 8089052 mraY Dickeya dadantii Ech703 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002986278.1 727919 D 579405 CDS YP_002986279.1 242238098 8089053 729004..730317 1 NC_012880.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 730317 murD 8089053 murD Dickeya dadantii Ech703 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002986279.1 729004 D 579405 CDS YP_002986280.1 242238099 8089054 730317..731519 1 NC_012880.1 integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 731519 8089054 Dd703_0647 Dickeya dadantii Ech703 cell division protein FtsW YP_002986280.1 730317 D 579405 CDS YP_002986281.1 242238100 8089055 731516..732607 1 NC_012880.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 732607 murG 8089055 murG Dickeya dadantii Ech703 UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase YP_002986281.1 731516 D 579405 CDS YP_002986282.1 242238101 8089056 732660..734120 1 NC_012880.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 734120 murC 8089056 murC Dickeya dadantii Ech703 UDP-N-acetylmuramate--L-alanine ligase YP_002986282.1 732660 D 579405 CDS YP_002986283.1 242238102 8089057 734126..734239 1 NC_012880.1 hypothetical protein 734239 8089057 Dd703_0650 Dickeya dadantii Ech703 hypothetical protein YP_002986283.1 734126 D 579405 CDS YP_002986284.1 242238103 8089058 734245..735099 1 NC_012880.1 involved in septum formation; cell division protein FtsQ 735099 8089058 Dd703_0651 Dickeya dadantii Ech703 cell division protein FtsQ YP_002986284.1 734245 D 579405 CDS YP_002986285.1 242238104 8089059 735096..736352 1 NC_012880.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 736352 ftsA 8089059 ftsA Dickeya dadantii Ech703 cell division protein FtsA YP_002986285.1 735096 D 579405 CDS YP_002986286.1 242238105 8089060 736427..737578 1 NC_012880.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 737578 8089060 Dd703_0653 Dickeya dadantii Ech703 cell division protein FtsZ YP_002986286.1 736427 D 579405 CDS YP_002986287.1 242238106 8089061 737658..738590 1 NC_012880.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 738590 lpxC 8089061 lpxC Dickeya dadantii Ech703 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002986287.1 737658 D 579405 CDS YP_002986288.1 242238107 8089062 complement(738605..739129) 1 NC_012880.1 PFAM: protein of unknown function DUF721; KEGG: eca:ECA3808 hypothetical protein; hypothetical protein 739129 8089062 Dd703_0655 Dickeya dadantii Ech703 hypothetical protein YP_002986288.1 738605 R 579405 CDS YP_002986289.1 242238108 8089063 739225..739659 1 NC_012880.1 secM translational pause allows for the initiation of secA translation; SecA regulator SecM 739659 8089063 Dd703_0656 Dickeya dadantii Ech703 SecA regulator SecM YP_002986289.1 739225 D 579405 CDS YP_002986290.1 242238109 8089064 739758..742451 1 NC_012880.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 742451 8089064 Dd703_0657 Dickeya dadantii Ech703 preprotein translocase subunit SecA YP_002986290.1 739758 D 579405 CDS YP_002986291.1 242238110 8089065 742527..742643 1 NC_012880.1 hypothetical protein 742643 8089065 Dd703_0658 Dickeya dadantii Ech703 hypothetical protein YP_002986291.1 742527 D 579405 CDS YP_002986292.1 242238111 8089066 742634..743038 1 NC_012880.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: eca:ECA3805 nucleoside triphosphate pyrophosphohydrolase; nucleoside triphosphate pyrophosphohydrolase 743038 8089066 Dd703_0659 Dickeya dadantii Ech703 nucleoside triphosphate pyrophosphohydrolase YP_002986292.1 742634 D 579405 CDS YP_002986293.1 242238112 8089067 complement(743048..743245) 1 NC_012880.1 PFAM: protein of unknown function DUF329; KEGG: eca:ECA3804 hypothetical protein; hypothetical protein 743245 8089067 Dd703_0660 Dickeya dadantii Ech703 hypothetical protein YP_002986293.1 743048 R 579405 CDS YP_002986294.1 242238113 8089068 complement(743273..744025) 1 NC_012880.1 PFAM: protein of unknown function DUF1342; KEGG: eca:ECA3803 hypothetical protein; hypothetical protein 744025 8089068 Dd703_0661 Dickeya dadantii Ech703 hypothetical protein YP_002986294.1 743273 R 579405 CDS YP_002986295.1 242238114 8089069 complement(744018..744644) 1 NC_012880.1 KEGG: eca:ECA3802 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 744644 8089069 Dd703_0662 Dickeya dadantii Ech703 dephospho-CoA kinase YP_002986295.1 744018 R 579405 CDS YP_002986296.1 242238115 8089070 744794..745834 1 NC_012880.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 745834 8089070 Dd703_0663 Dickeya dadantii Ech703 guanosine 5'-monophosphate oxidoreductase YP_002986296.1 744794 D 579405 CDS YP_002986297.1 242238116 8089071 complement(745862..747064) 1 NC_012880.1 PFAM: type II secretion system protein; KEGG: eca:ECA3800 type IV pilin biogenesis protein; type IV pilin biogenesis protein 747064 8089071 Dd703_0664 Dickeya dadantii Ech703 type IV pilin biogenesis protein YP_002986297.1 745862 R 579405 CDS YP_002986298.1 242238117 8089072 complement(747076..748497) 1 NC_012880.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: eca:ECA3799 hypothetical protein; hypothetical protein 748497 8089072 Dd703_0665 Dickeya dadantii Ech703 hypothetical protein YP_002986298.1 747076 R 579405 CDS YP_002986299.1 242238118 8089073 complement(748503..748946) 1 NC_012880.1 KEGG: eca:ECA3798 major pilin subunit; major pilin subunit 748946 8089073 Dd703_0666 Dickeya dadantii Ech703 major pilin subunit YP_002986299.1 748503 R 579405 CDS YP_002986300.1 242238119 8089074 complement(749210..750100) 1 NC_012880.1 KEGG: spe:Spro_0779 quinolinate phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 750100 8089074 Dd703_0667 Dickeya dadantii Ech703 nicotinate-nucleotide pyrophosphorylase YP_002986300.1 749210 R 579405 CDS YP_002986301.1 242238120 8089075 complement(750239..751102) 1 NC_012880.1 PFAM: nucleoside-specific channel-forming protein Tsx; KEGG: eca:ECA3796 nucleoside-specific channel-forming protein; nucleoside-specific channel-forming protein Tsx 751102 8089075 Dd703_0668 Dickeya dadantii Ech703 nucleoside-specific channel-forming protein Tsx YP_002986301.1 750239 R 579405 CDS YP_002986302.1 242238121 8089076 751524..752090 1 NC_012880.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: yps:YPTB0709 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase 752090 8089076 Dd703_0669 Dickeya dadantii Ech703 N-acetyl-anhydromuranmyl-L-alanine amidase YP_002986302.1 751524 D 579405 CDS YP_002986303.1 242238122 8089077 752097..752951 1 NC_012880.1 involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE 752951 8089077 Dd703_0670 Dickeya dadantii Ech703 regulatory protein AmpE YP_002986303.1 752097 D 579405 CDS YP_002986304.1 242238123 8089078 complement(753153..754514) 1 NC_012880.1 PFAM: amino acid permease-associated region; KEGG: eca:ECA3791 aromatic amino acid transporter; amino acid permease-associated protein 754514 8089078 Dd703_0671 Dickeya dadantii Ech703 amino acid permease-associated protein YP_002986304.1 753153 R 579405 CDS YP_002986305.1 242238124 8089079 754562..754756 1 NC_012880.1 hypothetical protein 754756 8089079 Dd703_0672 Dickeya dadantii Ech703 hypothetical protein YP_002986305.1 754562 D 579405 CDS YP_002986306.1 242238125 8089080 755164..755928 1 NC_012880.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 755928 pdhR 8089080 pdhR Dickeya dadantii Ech703 transcriptional regulator PdhR YP_002986306.1 755164 D 579405 CDS YP_002986307.1 242238126 8089081 756058..758721 1 NC_012880.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 758721 aceE 8089081 aceE Dickeya dadantii Ech703 pyruvate dehydrogenase subunit E1 YP_002986307.1 756058 D 579405 CDS YP_002986308.1 242238127 8089082 758735..760585 1 NC_012880.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase 760585 aceF 8089082 aceF Dickeya dadantii Ech703 dihydrolipoamide acetyltransferase YP_002986308.1 758735 D 579405 CDS YP_002986309.1 242238128 8089083 760799..762223 1 NC_012880.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: cko:CKO_03256 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 762223 8089083 Dd703_0676 Dickeya dadantii Ech703 dihydrolipoamide dehydrogenase YP_002986309.1 760799 D 579405 CDS YP_002986310.1 242238129 8089084 762380..763564 1 NC_012880.1 PFAM: dienelactone hydrolase; KEGG: eca:ECA3785 hypothetical protein; dienelactone hydrolase 763564 8089084 Dd703_0677 Dickeya dadantii Ech703 dienelactone hydrolase YP_002986310.1 762380 D 579405 CDS YP_002986311.1 242238130 8089085 complement(763605..764939) 1 NC_012880.1 PFAM: MmgE/PrpD family protein; KEGG: eca:ECA3784 hypothetical protein; MmgE/PrpD family protein 764939 8089085 Dd703_0678 Dickeya dadantii Ech703 MmgE/PrpD family protein YP_002986311.1 763605 R 579405 CDS YP_002986312.1 242238131 8089086 complement(765193..766194) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA3783 AraC family transcription regulator; AraC family transcriptional regulator 766194 8089086 Dd703_0679 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986312.1 765193 R 579405 CDS YP_002986313.1 242238132 8089087 766378..768729 1 NC_012880.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 768729 8089087 Dd703_0680 Dickeya dadantii Ech703 outer membrane receptor FepA YP_002986313.1 766378 D 579405 CDS YP_002986314.1 242238133 8089088 768803..769657 1 NC_012880.1 PFAM: esterase; KEGG: mxa:MXAN_1690 esterase; esterase 769657 8089088 Dd703_0681 Dickeya dadantii Ech703 esterase YP_002986314.1 768803 D 579405 CDS YP_002986315.1 242238134 8089089 770079..772676 1 NC_012880.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 772676 8089089 Dd703_0682 Dickeya dadantii Ech703 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_002986315.1 770079 D 579405 CDS YP_002986316.1 242238135 8089090 772788..773150 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA3777 hypothetical protein; hypothetical protein 773150 8089090 Dd703_0683 Dickeya dadantii Ech703 hypothetical protein YP_002986316.1 772788 D 579405 CDS YP_002986317.1 242238136 8089091 complement(773241..773924) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA3767 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 773924 8089091 Dd703_0684 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002986317.1 773241 R 579405 CDS YP_002986318.1 242238137 8089092 complement(773921..774406) 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA3766 hypothetical protein; hypothetical protein 774406 8089092 Dd703_0685 Dickeya dadantii Ech703 hypothetical protein YP_002986318.1 773921 R 579405 CDS YP_002986319.1 242238138 8089093 complement(774625..774726) 1 NC_012880.1 hypothetical protein 774726 8089093 Dd703_0686 Dickeya dadantii Ech703 hypothetical protein YP_002986319.1 774625 R 579405 CDS YP_002986320.1 242238139 8089094 complement(774755..775936) 1 NC_012880.1 KEGG: eca:ECA3765 hypothetical protein; hypothetical protein 775936 8089094 Dd703_0687 Dickeya dadantii Ech703 hypothetical protein YP_002986320.1 774755 R 579405 CDS YP_002986321.1 242238140 8089095 complement(775943..777358) 1 NC_012880.1 PFAM: Na+/solute symporter; KEGG: eca:ECA3764 sodium:solute symporter; Na+/solute symporter 777358 8089095 Dd703_0688 Dickeya dadantii Ech703 Na+/solute symporter YP_002986321.1 775943 R 579405 CDS YP_002986322.1 242238141 8089096 complement(777415..778299) 1 NC_012880.1 PFAM: dihydrodipicolinate synthetase; KEGG: eca:ECA3763 dihydrodipicolinate synthase; dihydrodipicolinate synthetase 778299 8089096 Dd703_0689 Dickeya dadantii Ech703 dihydrodipicolinate synthetase YP_002986322.1 777415 R 579405 CDS YP_002986323.1 242238142 8089097 complement(778337..779473) 1 NC_012880.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: eca:ECA3762 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 779473 8089097 Dd703_0690 Dickeya dadantii Ech703 iron-containing alcohol dehydrogenase YP_002986323.1 778337 R 579405 CDS YP_002986324.1 242238143 8089098 779719..780987 1 NC_012880.1 PFAM: type III effector Hrp-dependent outers; KEGG: eca:ECA3761 hypothetical protein; Hrp-dependent type III effector protein 780987 8089098 Dd703_0691 Dickeya dadantii Ech703 Hrp-dependent type III effector protein YP_002986324.1 779719 D 579405 CDS YP_002986325.1 242238144 8089099 780980..781960 1 NC_012880.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 781960 pdxA 8089099 pdxA Dickeya dadantii Ech703 4-hydroxythreonine-4-phosphate dehydrogenase YP_002986325.1 780980 D 579405 CDS YP_002986326.1 242238145 8089100 781997..782806 1 NC_012880.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eca:ECA3759 DeoR family transcriptional regulator; DeoR family transcriptional regulator 782806 8089100 Dd703_0693 Dickeya dadantii Ech703 DeoR family transcriptional regulator YP_002986326.1 781997 D 579405 CDS YP_002986327.1 242238146 8089101 complement(782902..783885) 1 NC_012880.1 KEGG: vei:Veis_3591 hypothetical protein; hypothetical protein 783885 8089101 Dd703_0694 Dickeya dadantii Ech703 hypothetical protein YP_002986327.1 782902 R 579405 CDS YP_002986328.1 242238147 8089102 complement(783969..784961) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: lch:Lcho_0454 LacI family transcription regulator; LacI family transcriptional regulator 784961 8089102 Dd703_0695 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002986328.1 783969 R 579405 CDS YP_002986329.1 242238148 8089103 complement(785029..785949) 1 NC_012880.1 PFAM: ROK family protein; KEGG: kpe:KPK_1046 ROK family protein; ROK family protein 785949 8089103 Dd703_0696 Dickeya dadantii Ech703 ROK family protein YP_002986329.1 785029 R 579405 CDS YP_002986330.1 242238149 8089104 786284..789397 1 NC_012880.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; glycoside hydrolase family 38 central region; KEGG: bha:BH0791 alpha-mannosidase; glycoside hydrolase family protein 789397 8089104 Dd703_0697 Dickeya dadantii Ech703 glycoside hydrolase family protein YP_002986330.1 786284 D 579405 CDS YP_002986331.1 242238150 8089105 789604..790890 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE0460 sugar binding protein; family 1 extracellular solute-binding protein 790890 8089105 Dd703_0698 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002986331.1 789604 D 579405 CDS YP_002986332.1 242238151 8089106 790998..791873 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: yen:YE0461 sugar transporter, permease; binding-protein-dependent transporters inner membrane component 791873 8089106 Dd703_0699 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986332.1 790998 D 579405 CDS YP_002986333.1 242238152 8089107 791910..792749 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: yps:YPTB0503 ABC type sugar transporter, permease; binding-protein-dependent transporters inner membrane component 792749 8089107 Dd703_0700 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986333.1 791910 D 579405 CDS YP_002986334.1 242238153 8089108 792828..793916 1 NC_012880.1 PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: yps:YPTB0504 sugar ABC transporter ATP-binding protein; ABC transporter 793916 8089108 Dd703_0701 Dickeya dadantii Ech703 ABC transporter YP_002986334.1 792828 D 579405 CDS YP_002986335.1 242238154 8089109 complement(794214..794780) 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: mmw:Mmwyl1_4122 hypothetical protein; hypothetical protein 794780 8089109 Dd703_0702 Dickeya dadantii Ech703 hypothetical protein YP_002986335.1 794214 R 579405 CDS YP_002986336.1 242238155 8089110 complement(795404..796282) 1 NC_012880.1 PFAM: periplasmic solute binding protein; KEGG: ecp:ECP_3824 periplasmic binding protein; periplasmic solute binding protein 796282 8089110 Dd703_0703 Dickeya dadantii Ech703 periplasmic solute binding protein YP_002986336.1 795404 R 579405 CDS YP_002986337.1 242238156 8089111 complement(796318..797178) 1 NC_012880.1 PFAM: ABC transporter; KEGG: ecp:ECP_3823 ABC-transporter membrane protein; ABC transporter 797178 8089111 Dd703_0704 Dickeya dadantii Ech703 ABC transporter YP_002986337.1 796318 R 579405 CDS YP_002986338.1 242238157 8089112 complement(797175..797873) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ecp:ECP_3822 ABC-transporter ATP-binding protein; ABC transporter 797873 8089112 Dd703_0705 Dickeya dadantii Ech703 ABC transporter YP_002986338.1 797175 R 579405 CDS YP_002986339.1 242238158 8089113 complement(797870..797974) 1 NC_012880.1 hypothetical protein 797974 8089113 Dd703_0706 Dickeya dadantii Ech703 hypothetical protein YP_002986339.1 797870 R 579405 CDS YP_002986340.1 242238159 8089114 798267..799202 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_7294 tungstate/molybdate binding protein; family 1 extracellular solute-binding protein 799202 8089114 Dd703_0707 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002986340.1 798267 D 579405 CDS YP_002986341.1 242238160 8089115 799211..799966 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sgl:SG0292 sulfate/molybdate ABC transporter permease; binding-protein-dependent transporters inner membrane component 799966 8089115 Dd703_0708 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986341.1 799211 D 579405 CDS YP_002986342.1 242238161 8089116 complement(799979..800872) 1 NC_012880.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: eca:ECA3753 hypothetical protein; BadF/BadG/BcrA/BcrD type ATPase 800872 8089116 Dd703_0709 Dickeya dadantii Ech703 BadF/BadG/BcrA/BcrD type ATPase YP_002986342.1 799979 R 579405 CDS YP_002986343.1 242238162 8089117 complement(800869..801417) 1 NC_012880.1 KEGG: eca:ECA3752 hypothetical protein; hypothetical protein 801417 8089117 Dd703_0710 Dickeya dadantii Ech703 hypothetical protein YP_002986343.1 800869 R 579405 CDS YP_002986344.1 242238163 8089118 complement(801420..802730) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3751 extracellular solute-binding protein; family 1 extracellular solute-binding protein 802730 8089118 Dd703_0711 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002986344.1 801420 R 579405 CDS YP_002986345.1 242238164 8089119 803160..805625 1 NC_012880.1 KEGG: eca:ECA3750 hypothetical protein; hypothetical protein 805625 8089119 Dd703_0712 Dickeya dadantii Ech703 hypothetical protein YP_002986345.1 803160 D 579405 CDS YP_002986346.1 242238165 8089120 805627..806715 1 NC_012880.1 PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3749 plant-inducible protein; glycosyl hydrolase family protein 806715 8089120 Dd703_0713 Dickeya dadantii Ech703 glycosyl hydrolase family protein YP_002986346.1 805627 D 579405 CDS YP_002986347.1 242238166 8089121 806727..807818 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: eca:ECA3748 ABC transporter ATP-binding protein; ABC transporter 807818 8089121 Dd703_0714 Dickeya dadantii Ech703 ABC transporter YP_002986347.1 806727 D 579405 CDS YP_002986348.1 242238167 8089122 807839..808840 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3747 ABC transporter membrane spanning protein; binding-protein-dependent transporters inner membrane component 808840 8089122 Dd703_0715 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986348.1 807839 D 579405 CDS YP_002986349.1 242238168 8089123 808852..809904 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3746 ABC transporter membrane spanning protein; binding-protein-dependent transporters inner membrane component 809904 8089123 Dd703_0716 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986349.1 808852 D 579405 CDS YP_002986350.1 242238169 8087990 809901..810935 1 NC_012880.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA3745 LacI family transcriptional regulator; LacI family transcriptional regulator 810935 8087990 Dd703_0717 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002986350.1 809901 D 579405 CDS YP_002986351.1 242238170 8087991 811122..812660 1 NC_012880.1 hypothetical protein 812660 8087991 Dd703_0718 Dickeya dadantii Ech703 hypothetical protein YP_002986351.1 811122 D 579405 CDS YP_002986352.1 242238171 8087992 812780..813202 1 NC_012880.1 KEGG: bac:BamMC406_1027 hypothetical protein; hypothetical protein 813202 8087992 Dd703_0719 Dickeya dadantii Ech703 hypothetical protein YP_002986352.1 812780 D 579405 CDS YP_002986353.1 242238172 8087993 813412..813999 1 NC_012880.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bpm:BURPS1710b_A1998 NAD(P)H-flavin oxidoreductase; flavin reductase domain-containing protein 813999 8087993 Dd703_0720 Dickeya dadantii Ech703 flavin reductase domain-containing protein YP_002986353.1 813412 D 579405 CDS YP_002986354.1 242238173 8087994 complement(814078..814371) 1 NC_012880.1 hypothetical protein 814371 8087994 Dd703_0721 Dickeya dadantii Ech703 hypothetical protein YP_002986354.1 814078 R 579405 CDS YP_002986355.1 242238174 8087995 complement(814388..816268) 1 NC_012880.1 KEGG: bpt:Bpet4285 mobile mitochondrial group II intron of COX1 which IS involved in pre-mRNA splicing and in deletion of introns from mitochondrial DNA; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); intron maturase type II; SMART: HNH nuclease; RNA-directed DNA polymerase 816268 8087995 Dd703_0722 Dickeya dadantii Ech703 RNA-directed DNA polymerase YP_002986355.1 814388 R 579405 CDS YP_002986356.1 242238175 8087996 complement(816882..817424) 1 NC_012880.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cko:CKO_03842 single-stranded DNA-binding protein; single-strand binding protein 817424 8087996 Dd703_0723 Dickeya dadantii Ech703 single-strand binding protein YP_002986356.1 816882 R 579405 CDS YP_002986357.1 242238176 8087997 817711..820542 1 NC_012880.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrsubunit betas scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 820542 uvrA 8087997 uvrA Dickeya dadantii Ech703 excinuclease ABC subunit A YP_002986357.1 817711 D 579405 CDS YP_002986358.1 242238177 8087998 820640..821065 1 NC_012880.1 PFAM: protein of unknown function UPF0047; KEGG: eca:ECA3688 hypothetical protein; hypothetical protein 821065 8087998 Dd703_0725 Dickeya dadantii Ech703 hypothetical protein YP_002986358.1 820640 D 579405 CDS YP_002986359.1 242238178 8087999 complement(821149..822792) 1 NC_012880.1 KEGG: eca:ECA3374 signaling membrane protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 822792 8087999 Dd703_0726 Dickeya dadantii Ech703 diguanylate cyclase YP_002986359.1 821149 R 579405 CDS YP_002986360.1 242238179 8088000 823619..825298 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0183 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 825298 8088000 Dd703_0727 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002986360.1 823619 D 579405 CDS YP_002986361.1 242238180 8088001 complement(827193..827660) 1 NC_012880.1 KEGG: plu:plu1782 hypothetical protein; hypothetical protein 827660 8088001 Dd703_0728 Dickeya dadantii Ech703 hypothetical protein YP_002986361.1 827193 R 579405 CDS YP_002986362.1 242238181 8088002 complement(828197..828751) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Csy4 family; KEGG: eca:ECA3684 hypothetical protein; CRISPR-associated protein, Csy4 family 828751 8088002 Dd703_0729 Dickeya dadantii Ech703 CRISPR-associated protein, Csy4 family YP_002986362.1 828197 R 579405 CDS YP_002986363.1 242238182 8088003 complement(828756..829766) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Csy3 family; KEGG: eca:ECA3683 hypothetical protein; CRISPR-associated protein, Csy3 family 829766 8088003 Dd703_0730 Dickeya dadantii Ech703 CRISPR-associated protein, Csy3 family YP_002986363.1 828756 R 579405 CDS YP_002986364.1 242238183 8088004 complement(829783..830733) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Csy2 family; KEGG: eca:ECA3682 hypothetical protein; CRISPR-associated protein, Csy2 family 830733 8088004 Dd703_0731 Dickeya dadantii Ech703 CRISPR-associated protein, Csy2 family YP_002986364.1 829783 R 579405 CDS YP_002986365.1 242238184 8088005 complement(830730..832055) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Csy1 family; KEGG: eca:ECA3681 hypothetical protein; CRISPR-associated protein, Csy1 family 832055 8088005 Dd703_0732 Dickeya dadantii Ech703 CRISPR-associated protein, Csy1 family YP_002986365.1 830730 R 579405 CDS YP_002986366.1 242238185 8088006 complement(832070..835357) 1 NC_012880.1 TIGRFAM: CRISPR-associated helicase Cas3 family; KEGG: eca:ECA3680 hypothetical protein; CRISPR-associated helicase Cas3 family 835357 8088006 Dd703_0733 Dickeya dadantii Ech703 CRISPR-associated helicase Cas3 family YP_002986366.1 832070 R 579405 CDS YP_002986367.1 242238186 8088007 complement(835354..836355) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: eca:ECA3679 hypothetical protein; CRISPR-associated protein Cas1 836355 8088007 Dd703_0734 Dickeya dadantii Ech703 CRISPR-associated protein Cas1 YP_002986367.1 835354 R 579405 CDS YP_002986368.1 242238187 8088008 complement(840546..841739) 1 NC_012880.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 841739 8088008 Dd703_0735 Dickeya dadantii Ech703 aromatic amino acid aminotransferase YP_002986368.1 840546 R 579405 CDS YP_002986369.1 242238188 8088009 complement(841795..842409) 1 NC_012880.1 PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein; hypothetical protein 842409 8088009 Dd703_0736 Dickeya dadantii Ech703 hypothetical protein YP_002986369.1 841795 R 579405 CDS YP_002986370.1 242238189 8088010 complement(842659..843141) 1 NC_012880.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA3668 transcription regulator AsnC; AsnC family transcriptional regulator 843141 8088010 Dd703_0737 Dickeya dadantii Ech703 AsnC family transcriptional regulator YP_002986370.1 842659 R 579405 CDS YP_002986371.1 242238190 8088011 843531..844298 1 NC_012880.1 KEGG: spe:Spro_4447 arogenate dehydratase; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; prephenate dehydratase 844298 8088011 Dd703_0738 Dickeya dadantii Ech703 prephenate dehydratase YP_002986371.1 843531 D 579405 CDS YP_002986372.1 242238191 8088012 844541..844789 1 NC_012880.1 PFAM: protein of unknown function DUF1471; KEGG: eca:ECA4414 hypothetical protein; hypothetical protein 844789 8088012 Dd703_0739 Dickeya dadantii Ech703 hypothetical protein YP_002986372.1 844541 D 579405 CDS YP_002986373.1 242238192 8088013 complement(844894..845970) 1 NC_012880.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 845970 alr 8088013 alr Dickeya dadantii Ech703 alanine racemase YP_002986373.1 844894 R 579405 CDS YP_002986374.1 242238193 8088014 complement(845989..847395) 1 NC_012880.1 KEGG: eca:ECA3664 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: ATPase AAA; replicative DNA helicase 847395 8088014 Dd703_0741 Dickeya dadantii Ech703 replicative DNA helicase YP_002986374.1 845989 R 579405 CDS YP_002986375.1 242238194 8088015 847513..848502 1 NC_012880.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA3663 quinone oxidoreductase, NADPH-dependent; quinone oxidoreductase 848502 8088015 Dd703_0742 Dickeya dadantii Ech703 quinone oxidoreductase YP_002986375.1 847513 D 579405 CDS YP_002986376.1 242238195 8088016 complement(848779..849000) 1 NC_012880.1 TIGRFAM: phage shock protein G; KEGG: yps:YPTB0373 phage shock protein G; phage shock protein G 849000 8088016 Dd703_0743 Dickeya dadantii Ech703 phage shock protein G YP_002986376.1 848779 R 579405 CDS YP_002986377.1 242238196 8088017 complement(849167..850174) 1 NC_012880.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase; KEGG: eca:ECA3660 tRNA-dihydrouridine synthase A; yjbN family TIM-barrel protein 850174 8088017 Dd703_0744 Dickeya dadantii Ech703 yjbN family TIM-barrel protein YP_002986377.1 849167 R 579405 CDS YP_002986378.1 242238197 8088018 complement(850263..850970) 1 NC_012880.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: spe:Spro_4489 GntR family transcriptional regulator; GntR family transcriptional regulator 850970 8088018 Dd703_0745 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986378.1 850263 R 579405 CDS YP_002986379.1 242238198 8088019 851176..852228 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_4488 extracellular solute-binding protein; family 1 extracellular solute-binding protein 852228 8088019 Dd703_0746 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002986379.1 851176 D 579405 CDS YP_002986380.1 242238199 8088020 852248..853072 1 NC_012880.1 KEGG: eta:ETA_31180 hypothetical protein; hypothetical protein 853072 8088020 Dd703_0747 Dickeya dadantii Ech703 hypothetical protein YP_002986380.1 852248 D 579405 CDS YP_002986381.1 242238200 8088021 853069..853911 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 853911 8088021 Dd703_0748 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986381.1 853069 D 579405 CDS YP_002986382.1 242238201 8088022 853947..854732 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eta:ETA_31160 ABC transporter permease, fragment; binding-protein-dependent transporters inner membrane component 854732 8088022 Dd703_0749 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986382.1 853947 D 579405 CDS YP_002986383.1 242238202 8088023 854734..855726 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: spe:Spro_4484 ABC transporter-related protein; ABC transporter 855726 8088023 Dd703_0750 Dickeya dadantii Ech703 ABC transporter YP_002986383.1 854734 D 579405 CDS YP_002986384.1 242238203 8088024 855748..857460 1 NC_012880.1 TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: eta:ETA_31140 sodium/phosphate cotransporter; sodium-dependent inorganic phosphate (Pi) transporter 857460 8088024 Dd703_0751 Dickeya dadantii Ech703 sodium-dependent inorganic phosphate (Pi) transporter YP_002986384.1 855748 D 579405 CDS YP_002986385.1 242238204 8088025 complement(857396..858316) 1 NC_012880.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; LysR family transcriptional regulator 858316 8088025 Dd703_0752 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986385.1 857396 R 579405 CDS YP_002986386.1 242238205 8088026 858431..859693 1 NC_012880.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 859693 8088026 Dd703_0753 Dickeya dadantii Ech703 diaminopimelate decarboxylase YP_002986386.1 858431 D 579405 CDS YP_002986387.1 242238206 8088027 complement(859712..860725) 1 NC_012880.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA3649 transcriptional repressor of carbon metabolism; LacI family transcriptional regulator 860725 8088027 Dd703_0754 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002986387.1 859712 R 579405 CDS YP_002986388.1 242238207 8088028 complement(861149..861475) 1 NC_012880.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: eca:ECA3648 PTS system, cellobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA 861475 8088028 Dd703_0755 Dickeya dadantii Ech703 PTS system lactose/cellobiose-specific transporter subunit IIA YP_002986388.1 861149 R 579405 CDS YP_002986389.1 242238208 8088029 861710..863050 1 NC_012880.1 KEGG: eca:ECA3647 PTS system, lichenan-specific IIC component; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 863050 8088029 Dd703_0756 Dickeya dadantii Ech703 PTS system lactose/cellobiose family transporter subunit IIC YP_002986389.1 861710 D 579405 CDS YP_002986390.1 242238209 8088030 863183..864619 1 NC_012880.1 PFAM: glycoside hydrolase family 1; KEGG: eca:ECA3646 6-phospho-beta-glucosidase; glycoside hydrolase family 1 864619 8088030 Dd703_0757 Dickeya dadantii Ech703 glycoside hydrolase family 1 YP_002986390.1 863183 D 579405 CDS YP_002986391.1 242238210 8088031 864628..864945 1 NC_012880.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: eca:ECA3645 PTS system, lichenan-specific IIB component; PTS system lactose/cellobiose-specific transporter subunit IIB 864945 8088031 Dd703_0758 Dickeya dadantii Ech703 PTS system lactose/cellobiose-specific transporter subunit IIB YP_002986391.1 864628 D 579405 CDS YP_002986392.1 242238211 8088032 865030..865797 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA3644 GntR family transcriptional regulator; GntR family transcriptional regulator 865797 8088032 Dd703_0759 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986392.1 865030 D 579405 CDS YP_002986393.1 242238212 8088033 865801..866271 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3643 GnaT-family acetyltransferase; N-acetyltransferase GCN5 866271 8088033 Dd703_0760 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002986393.1 865801 D 579405 CDS YP_002986394.1 242238213 8088034 complement(866282..867328) 1 NC_012880.1 controls transcription of galETKM; DNA-binding transcriptional regulator GalR 867328 8088034 Dd703_0761 Dickeya dadantii Ech703 DNA-binding transcriptional regulator GalR YP_002986394.1 866282 R 579405 CDS YP_002986395.1 242238214 8088035 867965..868810 1 NC_012880.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: esa:ESA_02544 hypothetical protein; transcriptional antiterminator BglG 868810 8088035 Dd703_0762 Dickeya dadantii Ech703 transcriptional antiterminator BglG YP_002986395.1 867965 D 579405 CDS YP_002986396.1 242238215 8088036 868920..870800 1 NC_012880.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: esa:ESA_02545 hypothetical protein; PTS system beta-glucoside-specific transporter subunit IIABC 870800 8088036 Dd703_0763 Dickeya dadantii Ech703 PTS system beta-glucoside-specific transporter subunit IIABC YP_002986396.1 868920 D 579405 CDS YP_002986397.1 242238216 8088037 870817..872286 1 NC_012880.1 PFAM: glycoside hydrolase family 1; KEGG: esa:ESA_02546 hypothetical protein; glycoside hydrolase family 1 872286 8088037 Dd703_0764 Dickeya dadantii Ech703 glycoside hydrolase family 1 YP_002986397.1 870817 D 579405 CDS YP_002986398.1 242238217 8088038 872311..873708 1 NC_012880.1 PFAM: glycoside hydrolase family 1; KEGG: esa:ESA_02547 hypothetical protein; 6-phospho-beta-glucosidase 873708 8088038 Dd703_0765 Dickeya dadantii Ech703 6-phospho-beta-glucosidase YP_002986398.1 872311 D 579405 CDS YP_002986399.1 242238218 8088039 874012..876174 1 NC_012880.1 transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 876174 8088039 Dd703_0766 Dickeya dadantii Ech703 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase YP_002986399.1 874012 D 579405 CDS YP_002986400.1 242238219 8088040 876171..877385 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3640 hypothetical protein; lysophospholipid transporter LplT 877385 8088040 Dd703_0767 Dickeya dadantii Ech703 lysophospholipid transporter LplT YP_002986400.1 876171 D 579405 CDS YP_002986401.1 242238220 8088041 877402..877878 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3639 acyltransferase; N-acetyltransferase GCN5 877878 8088041 Dd703_0768 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002986401.1 877402 D 579405 CDS YP_002986402.1 242238221 8088042 complement(877955..878083) 1 NC_012880.1 PFAM: entericidin EcnAB; KEGG: eca:ECA3638 entericidin A precursor; entericidin EcnAB 878083 8088042 Dd703_0769 Dickeya dadantii Ech703 entericidin EcnAB YP_002986402.1 877955 R 579405 CDS YP_002986403.1 242238222 8088043 complement(878403..879539) 1 NC_012880.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 879539 8088043 Dd703_0770 Dickeya dadantii Ech703 coproporphyrinogen III oxidase YP_002986403.1 878403 R 579405 CDS YP_002986404.1 242238223 8088044 complement(879532..880125) 1 NC_012880.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 880125 8088044 Dd703_0771 Dickeya dadantii Ech703 deoxyribonucleotide triphosphate pyrophosphatase YP_002986404.1 879532 R 579405 CDS YP_002986405.1 242238224 8088045 complement(880229..880528) 1 NC_012880.1 PFAM: protein of unknown function DUF167; KEGG: eca:ECA3630 hypothetical protein; hypothetical protein 880528 8088045 Dd703_0772 Dickeya dadantii Ech703 hypothetical protein YP_002986405.1 880229 R 579405 CDS YP_002986406.1 242238225 8088046 complement(880525..881079) 1 NC_012880.1 PFAM: protein of unknown function YGGT; KEGG: eca:ECA3629 hypothetical protein; hypothetical protein 881079 8088046 Dd703_0773 Dickeya dadantii Ech703 hypothetical protein YP_002986406.1 880525 R 579405 CDS YP_002986407.1 242238226 8088047 complement(881122..881940) 1 NC_012880.1 KEGG: eca:ECA3628 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 881940 8088047 Dd703_0774 Dickeya dadantii Ech703 pyrroline-5-carboxylate reductase YP_002986407.1 881122 R 579405 CDS YP_002986408.1 242238227 8088048 complement(881968..882693) 1 NC_012880.1 PFAM: alanine racemase domain protein; KEGG: eca:ECA3627 alanine racemase; alanine racemase domain-containing protein 882693 8088048 Dd703_0775 Dickeya dadantii Ech703 alanine racemase domain-containing protein YP_002986408.1 881968 R 579405 CDS YP_002986409.1 242238228 8088049 882717..883757 1 NC_012880.1 KEGG: eca:ECA3626 type II/IV secretion system protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA; twitching motility protein 883757 8088049 Dd703_0776 Dickeya dadantii Ech703 twitching motility protein YP_002986409.1 882717 D 579405 CDS YP_002986410.1 242238229 8088050 complement(884059..885297) 1 NC_012880.1 PFAM: amidohydrolase; amidohydrolase; KEGG: esa:ESA_03405 hypothetical protein; cytosine deaminase 885297 8088050 Dd703_0777 Dickeya dadantii Ech703 cytosine deaminase YP_002986410.1 884059 R 579405 CDS YP_002986411.1 242238230 8088051 complement(885294..886571) 1 NC_012880.1 PFAM: purine catabolism PurC domain protein; helix-turn-helix Fis-type; KEGG: bte:BTH_II1640 DNA-binding protein; PucR family transcriptional regulator 886571 8088051 Dd703_0778 Dickeya dadantii Ech703 PucR family transcriptional regulator YP_002986411.1 885294 R 579405 CDS YP_002986412.1 242238231 8088052 complement(886568..887833) 1 NC_012880.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: esa:ESA_03406 cytosine permease; cytosine permease 887833 codB 8088052 codB Dickeya dadantii Ech703 cytosine permease YP_002986412.1 886568 R 579405 CDS YP_002986413.1 242238232 8088053 887874..887975 1 NC_012880.1 hypothetical protein 887975 8088053 Dd703_0780 Dickeya dadantii Ech703 hypothetical protein YP_002986413.1 887874 D 579405 CDS YP_002986414.1 242238233 8088054 complement(888109..889017) 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bsu:BSU02210 hypothetical protein; hypothetical protein 889017 8088054 Dd703_0781 Dickeya dadantii Ech703 hypothetical protein YP_002986414.1 888109 R 579405 CDS YP_002986415.1 242238234 8088055 complement(889213..890745) 1 NC_012880.1 PFAM: radical SAM protein; KEGG: nar:Saro_3029 radical SAM family protein; radical SAM protein 890745 8088055 Dd703_0782 Dickeya dadantii Ech703 radical SAM protein YP_002986415.1 889213 R 579405 CDS YP_002986416.1 242238235 8088056 complement(890765..892174) 1 NC_012880.1 PFAM: radical SAM protein; KEGG: nar:Saro_3029 radical SAM family protein; radical SAM protein 892174 8088056 Dd703_0783 Dickeya dadantii Ech703 radical SAM protein YP_002986416.1 890765 R 579405 CDS YP_002986417.1 242238236 8088057 complement(892278..892490) 1 NC_012880.1 KEGG: hypothetical protein LOC777554; hypothetical protein 892490 8088057 Dd703_0784 Dickeya dadantii Ech703 hypothetical protein YP_002986417.1 892278 R 579405 CDS YP_002986418.1 242238237 8088058 complement(892970..894208) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: afw:Anae109_4401 major facilitator transporter; major facilitator superfamily protein 894208 8088058 Dd703_0785 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986418.1 892970 R 579405 CDS YP_002986419.1 242238238 8088059 complement(894587..896176) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3624 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 896176 8088059 Dd703_0786 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002986419.1 894587 R 579405 CDS YP_002986420.1 242238239 8088060 896632..897057 1 NC_012880.1 negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 897057 8088060 Dd703_0787 Dickeya dadantii Ech703 transcriptional repressor NsrR YP_002986420.1 896632 D 579405 CDS YP_002986421.1 242238240 8088061 897101..899560 1 NC_012880.1 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R 899560 8088061 Dd703_0788 Dickeya dadantii Ech703 exoribonuclease R YP_002986421.1 897101 D 579405 CDS YP_002986422.1 242238241 8088062 899685..900419 1 NC_012880.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 900419 8088062 Dd703_0789 Dickeya dadantii Ech703 23S rRNA (guanosine-2'-O-)-methyltransferase YP_002986422.1 899685 D 579405 CDS YP_002986423.1 242238242 8088063 complement(900657..900932) 1 NC_012880.1 hypothetical protein 900932 8088063 Dd703_0790 Dickeya dadantii Ech703 hypothetical protein YP_002986423.1 900657 R 579405 CDS YP_002986424.1 242238243 8088064 complement(900988..901317) 1 NC_012880.1 in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; biofilm stress and motility protein A 901317 8088064 Dd703_0791 Dickeya dadantii Ech703 biofilm stress and motility protein A YP_002986424.1 900988 R 579405 CDS YP_002986425.1 242238244 8088065 complement(901445..903400) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3615 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 903400 8088065 Dd703_0792 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002986425.1 901445 R 579405 CDS YP_002986426.1 242238245 8088066 903617..904369 1 NC_012880.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 904369 8088066 Dd703_0793 Dickeya dadantii Ech703 esterase YP_002986426.1 903617 D 579405 CDS YP_002986427.1 242238246 8088067 904563..904955 1 NC_012880.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 904955 rpsF 8088067 rpsF Dickeya dadantii Ech703 30S ribosomal protein S6 YP_002986427.1 904563 D 579405 CDS YP_002986428.1 242238247 8088068 904961..905281 1 NC_012880.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 905281 8088068 Dd703_0795 Dickeya dadantii Ech703 primosomal replication protein N YP_002986428.1 904961 D 579405 CDS YP_002986429.1 242238248 8088069 905286..905513 1 NC_012880.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 905513 rpsR 8088069 rpsR Dickeya dadantii Ech703 30S ribosomal protein S18 YP_002986429.1 905286 D 579405 CDS YP_002986430.1 242238249 8088070 905554..906006 1 NC_012880.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 906006 rplI 8088070 rplI Dickeya dadantii Ech703 50S ribosomal protein L9 YP_002986430.1 905554 D 579405 CDS YP_002986431.1 242238250 8089934 906301..906672 1 NC_012880.1 PFAM: protein of unknown function DUF488; KEGG: spe:Spro_0450 hypothetical protein; hypothetical protein 906672 8089934 Dd703_0798 Dickeya dadantii Ech703 hypothetical protein YP_002986431.1 906301 D 579405 CDS YP_002986432.1 242238251 8089935 complement(906656..907375) 1 NC_012880.1 PFAM: Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: eca:ECA3608 hypothetical protein; Opacity-associated protein A 907375 8089935 Dd703_0799 Dickeya dadantii Ech703 Opacity-associated protein A YP_002986432.1 906656 R 579405 CDS YP_002986433.1 242238252 8089936 907600..908220 1 NC_012880.1 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 908220 8089936 Dd703_0800 Dickeya dadantii Ech703 peptidyl-prolyl cis-trans isomerase YP_002986433.1 907600 D 579405 CDS YP_002986434.1 242238253 8089937 complement(908269..910041) 1 NC_012880.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_3883 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 910041 8089937 Dd703_0801 Dickeya dadantii Ech703 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002986434.1 908269 R 579405 CDS YP_002986435.1 242238254 8089938 complement(910076..910714) 1 NC_012880.1 PFAM: ANTAR domain protein; KEGG: bpy:Bphyt_5752 response regulator receiver and ANTAR domain protein; ANTAR domain-containing protein 910714 8089938 Dd703_0802 Dickeya dadantii Ech703 ANTAR domain-containing protein YP_002986435.1 910076 R 579405 CDS YP_002986436.1 242238255 8089939 complement(910704..911870) 1 NC_012880.1 KEGG: bpy:Bphyt_5753 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched-chain amino acid ABC transporter substrate-binding protein 911870 8089939 Dd703_0803 Dickeya dadantii Ech703 branched-chain amino acid ABC transporter substrate-binding protein YP_002986436.1 910704 R 579405 CDS YP_002986437.1 242238256 8089940 complement(911921..912910) 1 NC_012880.1 PFAM: acetamidase/Formamidase; KEGG: bpy:Bphyt_5754 acetamidase/formamidase; acetamidase/formamidase 912910 8089940 Dd703_0804 Dickeya dadantii Ech703 acetamidase/formamidase YP_002986437.1 911921 R 579405 CDS YP_002986438.1 242238257 8089941 complement(912974..913693) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bpy:Bphyt_5755 ABC transporter; ABC transporter 913693 8089941 Dd703_0805 Dickeya dadantii Ech703 ABC transporter YP_002986438.1 912974 R 579405 CDS YP_002986439.1 242238258 8089942 complement(913698..914423) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bpy:Bphyt_5756 ABC transporter; ABC transporter 914423 8089942 Dd703_0806 Dickeya dadantii Ech703 ABC transporter YP_002986439.1 913698 R 579405 CDS YP_002986440.1 242238259 8089943 complement(914420..915478) 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_5757 inner-membrane translocator; inner-membrane translocator 915478 8089943 Dd703_0807 Dickeya dadantii Ech703 inner-membrane translocator YP_002986440.1 914420 R 579405 CDS YP_002986441.1 242238260 8089944 complement(915489..916358) 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_5758 inner-membrane translocator; inner-membrane translocator 916358 8089944 Dd703_0808 Dickeya dadantii Ech703 inner-membrane translocator YP_002986441.1 915489 R 579405 CDS YP_002986442.1 242238261 8089945 complement(916449..917693) 1 NC_012880.1 PFAM: extracellular ligand-binding receptor; KEGG: bpy:Bphyt_5759 UreA/short-chain amide transporter substrate-binding protein precursor; extracellular ligand-binding receptor 917693 8089945 Dd703_0809 Dickeya dadantii Ech703 extracellular ligand-binding receptor YP_002986442.1 916449 R 579405 CDS YP_002986443.1 242238262 8089946 918602..919093 1 NC_012880.1 hypothetical protein 919093 8089946 Dd703_0810 Dickeya dadantii Ech703 hypothetical protein YP_002986443.1 918602 D 579405 CDS YP_002986444.1 242238263 8089947 919931..920281 1 NC_012880.1 KEGG: ecd:ECDH10B_0005 hypothetical protein; hypothetical protein 920281 8089947 Dd703_0811 Dickeya dadantii Ech703 hypothetical protein YP_002986444.1 919931 D 579405 CDS YP_002986445.1 242238264 8089948 920679..921566 1 NC_012880.1 hypothetical protein 921566 8089948 Dd703_0812 Dickeya dadantii Ech703 hypothetical protein YP_002986445.1 920679 D 579405 CDS YP_002986446.1 242238265 8089949 921639..922187 1 NC_012880.1 hypothetical protein 922187 8089949 Dd703_0813 Dickeya dadantii Ech703 hypothetical protein YP_002986446.1 921639 D 579405 CDS YP_002986447.1 242238266 8089951 complement(922522..923190) 1 NC_012880.1 Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein 923190 8089951 Dd703_0815 Dickeya dadantii Ech703 iron-sulfur cluster repair di-iron protein YP_002986447.1 922522 R 579405 CDS YP_002986448.1 242238267 8089952 complement(923375..925327) 1 NC_012880.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 925327 cpdB 8089952 cpdB Dickeya dadantii Ech703 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_002986448.1 923375 R 579405 CDS YP_002986449.1 242238268 8089953 925526..926266 1 NC_012880.1 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase 926266 8089953 Dd703_0817 Dickeya dadantii Ech703 adenosine-3'(2'),5'-bisphosphate nucleotidase YP_002986449.1 925526 D 579405 CDS YP_002986450.1 242238269 8089954 complement(926228..926833) 1 NC_012880.1 KEGG: eca:ECA3600 hypothetical protein; hypothetical protein 926833 8089954 Dd703_0818 Dickeya dadantii Ech703 hypothetical protein YP_002986450.1 926228 R 579405 CDS YP_002986451.1 242238270 8089955 927177..927383 1 NC_012880.1 PFAM: protein of unknown function DUF1107; KEGG: eca:ECA3599 hypothetical protein; hypothetical protein 927383 8089955 Dd703_0819 Dickeya dadantii Ech703 hypothetical protein YP_002986451.1 927177 D 579405 CDS YP_002986452.1 242238271 8089956 complement(927439..928773) 1 NC_012880.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: eca:ECA3598 hypothetical protein; hypothetical protein 928773 8089956 Dd703_0820 Dickeya dadantii Ech703 hypothetical protein YP_002986452.1 927439 R 579405 CDS YP_002986453.1 242238272 8089957 complement(928919..929557) 1 NC_012880.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 929557 8089957 Dd703_0821 Dickeya dadantii Ech703 methionine sulfoxide reductase A YP_002986453.1 928919 R 579405 CDS YP_002986454.1 242238273 8089958 929816..931591 1 NC_012880.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: eca:ECA3596 hypothetical protein; surface antigen (D15) 931591 8089958 Dd703_0822 Dickeya dadantii Ech703 surface antigen (D15) YP_002986454.1 929816 D 579405 CDS YP_002986455.1 242238274 8089959 931588..935337 1 NC_012880.1 PFAM: protein of unknown function DUF490; KEGG: eca:ECA3595 hypothetical protein; hypothetical protein 935337 8089959 Dd703_0823 Dickeya dadantii Ech703 hypothetical protein YP_002986455.1 931588 D 579405 CDS YP_002986456.1 242238275 8089960 935340..935684 1 NC_012880.1 PFAM: AIG2 family protein; KEGG: eca:ECA3594 hypothetical protein; AIG2 family protein 935684 8089960 Dd703_0824 Dickeya dadantii Ech703 AIG2 family protein YP_002986456.1 935340 D 579405 CDS YP_002986457.1 242238276 8089961 complement(935758..936288) 1 NC_012880.1 PFAM: inorganic pyrophosphatase; KEGG: kpe:KPK_5044 inorganic diphosphatase; inorganic diphosphatase 936288 8089961 Dd703_0825 Dickeya dadantii Ech703 inorganic diphosphatase YP_002986457.1 935758 R 579405 CDS YP_002986458.1 242238277 8089962 936577..938166 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3592 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 938166 8089962 Dd703_0826 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002986458.1 936577 D 579405 CDS YP_002986459.1 242238278 8089963 complement(938209..938841) 1 NC_012880.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 938841 8089963 Dd703_0827 Dickeya dadantii Ech703 glycerol-3-phosphate acyltransferase PlsY YP_002986459.1 938209 R 579405 CDS YP_002986460.1 242238279 8089964 938951..939304 1 NC_012880.1 KEGG: eca:ECA3590 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 939304 8089964 Dd703_0828 Dickeya dadantii Ech703 dihydroneopterin aldolase YP_002986460.1 938951 D 579405 CDS YP_002986461.1 242238280 8089965 939448..940266 1 NC_012880.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 940266 8089965 Dd703_0829 Dickeya dadantii Ech703 UDP pyrophosphate phosphatase YP_002986461.1 939448 D 579405 CDS YP_002986462.1 242238281 8089966 complement(940332..941570) 1 NC_012880.1 PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: eca:ECA3588 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 941570 8089966 Dd703_0830 Dickeya dadantii Ech703 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_002986462.1 940332 R 579405 CDS YP_002986463.1 242238282 8089967 complement(941802..942419) 1 NC_012880.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: eca:ECA3587 signal transduction protein; signal transduction protein 942419 8089967 Dd703_0831 Dickeya dadantii Ech703 signal transduction protein YP_002986463.1 941802 R 579405 CDS YP_002986464.1 242238283 8089968 942604..943935 1 NC_012880.1 PFAM: adenylate cyclase; KEGG: eca:ECA3586 hypothetical protein; adenylate cyclase 943935 8089968 Dd703_0832 Dickeya dadantii Ech703 adenylate cyclase YP_002986464.1 942604 D 579405 CDS YP_002986465.1 242238284 8089969 944062..946911 1 NC_012880.1 PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: eca:ECA3585 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 946911 8089969 Dd703_0833 Dickeya dadantii Ech703 (glutamate--ammonia-ligase) adenylyltransferase YP_002986465.1 944062 D 579405 CDS YP_002986466.1 242238285 8089970 947127..948554 1 NC_012880.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 948554 8089970 Dd703_0834 Dickeya dadantii Ech703 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_002986466.1 947127 D 579405 CDS YP_002986467.1 242238286 8089971 948566..950620 1 NC_012880.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 950620 ligA 8089971 ligA Dickeya dadantii Ech703 NAD-dependent DNA ligase LigA YP_002986467.1 948566 D 579405 CDS YP_002986468.1 242238287 8089972 950625..950837 1 NC_012880.1 KEGG: ypg:YpAngola_A2743 hypothetical protein; hypothetical protein 950837 8089972 Dd703_0836 Dickeya dadantii Ech703 hypothetical protein YP_002986468.1 950625 D 579405 CDS YP_002986469.1 242238288 8089973 complement(951030..951416) 1 NC_012880.1 KEGG: eca:ECA3581 hypothetical protein; hypothetical protein 951416 8089973 Dd703_0837 Dickeya dadantii Ech703 hypothetical protein YP_002986469.1 951030 R 579405 CDS YP_002986470.1 242238289 8089974 complement(951637..952020) 1 NC_012880.1 KEGG: cko:CKO_00388 hypothetical protein; hypothetical protein 952020 8089974 Dd703_0838 Dickeya dadantii Ech703 hypothetical protein YP_002986470.1 951637 R 579405 CDS YP_002986471.1 242238290 8089975 complement(952161..953696) 1 NC_012880.1 KEGG: eca:ECA3579 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 953696 8089975 Dd703_0839 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_002986471.1 952161 R 579405 CDS YP_002986472.1 242238291 8089976 complement(954516..956090) 1 NC_012880.1 KEGG: eca:ECA3578 D-galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 956090 8089976 Dd703_0840 Dickeya dadantii Ech703 galactarate dehydratase YP_002986472.1 954516 R 579405 CDS YP_002986473.1 242238292 8089977 956622..957974 1 NC_012880.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA3577 glucarate transporter; d-galactonate transporter 957974 8089977 Dd703_0841 Dickeya dadantii Ech703 d-galactonate transporter YP_002986473.1 956622 D 579405 CDS YP_002986474.1 242238293 8089978 957997..959358 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA3576 glucarate dehydratase; glucarate dehydratase 959358 8089978 Dd703_0842 Dickeya dadantii Ech703 glucarate dehydratase YP_002986474.1 957997 D 579405 CDS YP_002986475.1 242238294 8089979 959375..960715 1 NC_012880.1 KEGG: eca:ECA3575 glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: mandelate racemase/muconate lactonizing protein; glucarate dehydratase 960715 8089979 Dd703_0843 Dickeya dadantii Ech703 glucarate dehydratase YP_002986475.1 959375 D 579405 CDS YP_002986476.1 242238295 8089980 960768..961538 1 NC_012880.1 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase 961538 8089980 Dd703_0844 Dickeya dadantii Ech703 alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_002986476.1 960768 D 579405 CDS YP_002986477.1 242238296 8089981 961735..962619 1 NC_012880.1 catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase 962619 garR 8089981 garR Dickeya dadantii Ech703 tartronate semialdehyde reductase YP_002986477.1 961735 D 579405 CDS YP_002986478.1 242238297 8089982 962722..963864 1 NC_012880.1 KEGG: eca:ECA3572 glycerate kinase 2; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase 963864 8089982 Dd703_0846 Dickeya dadantii Ech703 glycerate kinase YP_002986478.1 962722 D 579405 CDS YP_002986479.1 242238298 8089983 complement(963971..966727) 1 NC_012880.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 966727 8089983 Dd703_0847 Dickeya dadantii Ech703 hybrid sensory histidine kinase BarA YP_002986479.1 963971 R 579405 CDS YP_002986480.1 242238299 8089984 966791..968119 1 NC_012880.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 968119 rumA 8089984 rumA Dickeya dadantii Ech703 23S rRNA 5-methyluridine methyltransferase YP_002986480.1 966791 D 579405 CDS YP_002986481.1 242238300 8089985 968134..970374 1 NC_012880.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 970374 relA 8089985 relA Dickeya dadantii Ech703 GDP/GTP pyrophosphokinase YP_002986481.1 968134 D 579405 CDS YP_002986482.1 242238301 8089986 970510..971310 1 NC_012880.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 971310 mazG 8089986 mazG Dickeya dadantii Ech703 nucleoside triphosphate pyrophosphohydrolase YP_002986482.1 970510 D 579405 CDS YP_002986483.1 242238302 8089987 971543..973180 1 NC_012880.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 973180 pyrG 8089987 pyrG Dickeya dadantii Ech703 CTP synthetase YP_002986483.1 971543 D 579405 CDS YP_002986484.1 242238303 8089988 973261..974559 1 NC_012880.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 974559 eno 8089988 eno Dickeya dadantii Ech703 phosphopyruvate hydratase YP_002986484.1 973261 D 579405 CDS YP_002986485.1 242238304 8089989 975029..976600 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3560 oligogalacturonide transporter; major facilitator superfamily protein 976600 8089989 Dd703_0853 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986485.1 975029 D 579405 CDS YP_002986486.1 242238305 8089990 976632..977771 1 NC_012880.1 PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein; glycosyl hydrolase family protein 977771 8089990 Dd703_0854 Dickeya dadantii Ech703 glycosyl hydrolase family protein YP_002986486.1 976632 D 579405 CDS YP_002986487.1 242238306 8089991 complement(977813..978787) 1 NC_012880.1 PFAM: beta-lactamase; KEGG: eca:ECA3555 metallo hydrolase; beta-lactamase 978787 8089991 Dd703_0855 Dickeya dadantii Ech703 beta-lactamase YP_002986487.1 977813 R 579405 CDS YP_002986488.1 242238307 8089992 979083..979757 1 NC_012880.1 KEGG: eca:ECA3554 hypothetical protein; hypothetical protein 979757 8089992 Dd703_0856 Dickeya dadantii Ech703 hypothetical protein YP_002986488.1 979083 D 579405 CDS YP_002986489.1 242238308 8089993 complement(979766..980131) 1 NC_012880.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: yps:YPTB0758 6-pyruvoyl tetrahydrobiopterin synthase family protein; hypothetical protein 980131 8089993 Dd703_0857 Dickeya dadantii Ech703 hypothetical protein YP_002986489.1 979766 R 579405 CDS YP_002986490.1 242238309 8089994 980548..982365 1 NC_012880.1 TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: eca:ECA3547 sulfite reductase subunit alpha; sulfite reductase (NADPH) flavoprotein, alpha chain 982365 8089994 Dd703_0858 Dickeya dadantii Ech703 sulfite reductase (NADPH) flavoprotein, alpha chain YP_002986490.1 980548 D 579405 CDS YP_002986491.1 242238310 8089995 982365..984080 1 NC_012880.1 hemoprotein; NADPH dependent; with the subunit alpha (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 984080 8089995 Dd703_0859 Dickeya dadantii Ech703 sulfite reductase subunit beta YP_002986491.1 982365 D 579405 CDS YP_002986492.1 242238311 8089996 984093..984827 1 NC_012880.1 TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: yps:YPTB0761 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 984827 8089996 Dd703_0860 Dickeya dadantii Ech703 phosphoadenosine phosphosulfate reductase YP_002986492.1 984093 D 579405 CDS YP_002986493.1 242238312 8089997 985124..986542 1 NC_012880.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA3544 siroheme synthase [includes: uroporphyrin-III C-methyltransferase; precorrin-2 oxidase; ferrochelatase]; uroporphyrin-III C-methyltransferase 986542 8089997 Dd703_0861 Dickeya dadantii Ech703 uroporphyrin-III C-methyltransferase YP_002986493.1 985124 D 579405 CDS YP_002986494.1 242238313 8089998 986552..987460 1 NC_012880.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 987460 8089998 Dd703_0862 Dickeya dadantii Ech703 sulfate adenylyltransferase subunit 2 YP_002986494.1 986552 D 579405 CDS YP_002986495.1 242238314 8089999 987472..988902 1 NC_012880.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 988902 cysN 8089999 cysN Dickeya dadantii Ech703 sulfate adenylyltransferase subunit 1 YP_002986495.1 987472 D 579405 CDS YP_002986496.1 242238315 8090000 988904..989527 1 NC_012880.1 KEGG: spe:Spro_0820 adenylyl-sulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase; adenylylsulfate kinase 989527 8090000 Dd703_0864 Dickeya dadantii Ech703 adenylylsulfate kinase YP_002986496.1 988904 D 579405 CDS YP_002986497.1 242238316 8090001 989610..989933 1 NC_012880.1 KEGG: spe:Spro_0821 hypothetical protein; hypothetical protein 989933 8090001 Dd703_0865 Dickeya dadantii Ech703 hypothetical protein YP_002986497.1 989610 D 579405 CDS YP_002986498.1 242238317 8090002 990086..990433 1 NC_012880.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 990433 ftsB 8090002 ftsB Dickeya dadantii Ech703 cell division protein FtsB YP_002986498.1 990086 D 579405 CDS YP_002986499.1 242238318 8090003 990436..991137 1 NC_012880.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: eca:ECA3535 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 991137 8090003 Dd703_0867 Dickeya dadantii Ech703 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002986499.1 990436 D 579405 CDS YP_002986500.1 242238319 8090004 991167..991664 1 NC_012880.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 991664 ispF 8090004 ispF Dickeya dadantii Ech703 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002986500.1 991167 D 579405 CDS YP_002986501.1 242238320 8090005 991658..992731 1 NC_012880.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 992731 truD 8090005 truD Dickeya dadantii Ech703 tRNA pseudouridine synthase D YP_002986501.1 991658 D 579405 CDS YP_002986502.1 242238321 8090006 992839..993465 1 NC_012880.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 993465 pcm 8090006 pcm Dickeya dadantii Ech703 protein-L-isoaspartate O-methyltransferase YP_002986502.1 992839 D 579405 CDS YP_002986503.1 242238322 8090007 993723..994928 1 NC_012880.1 PFAM: peptidase M23; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: eca:ECA3531 lipoprotein NlpD; peptidase M23 994928 8090007 Dd703_0871 Dickeya dadantii Ech703 peptidase M23 YP_002986503.1 993723 D 579405 CDS YP_002986504.1 242238323 8090008 994982..995974 1 NC_012880.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 995974 8090008 Dd703_0872 Dickeya dadantii Ech703 RNA polymerase sigma factor RpoS YP_002986504.1 994982 D 579405 CDS YP_002986505.1 242238324 8090009 complement(996054..997772) 1 NC_012880.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 997772 8090009 Dd703_0873 Dickeya dadantii Ech703 prolyl-tRNA synthetase YP_002986505.1 996054 R 579405 CDS YP_002986506.1 242238325 8090010 complement(997888..998595) 1 NC_012880.1 PFAM: protein of unknown function UPF0066; KEGG: ypg:YpAngola_A3409 hypothetical protein; hypothetical protein 998595 8090010 Dd703_0874 Dickeya dadantii Ech703 hypothetical protein YP_002986506.1 997888 R 579405 CDS YP_002986507.1 242238326 8090011 complement(998592..998999) 1 NC_012880.1 KEGG: eca:ECA3527 outer membrane lipoprotein; outer membrane lipoprotein 998999 rcsF 8090011 rcsF Dickeya dadantii Ech703 outer membrane lipoprotein YP_002986507.1 998592 R 579405 CDS YP_002986508.1 242238327 8090012 complement(999113..999928) 1 NC_012880.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; substrate-binding region of ABC-type glycine betaine transporter; KEGG: eca:ECA3526 DL-methionine transporter substrate-binding subunit; DL-methionine transporter substrate-binding subunit 999928 metQ 8090012 metQ Dickeya dadantii Ech703 DL-methionine transporter substrate-binding subunit YP_002986508.1 999113 R 579405 CDS YP_002986509.1 242238328 8090013 complement(999992..1000645) 1 NC_012880.1 part of the MetNIQ methionine uptake system; DL-methionine transporter permease 1000645 8090013 Dd703_0877 Dickeya dadantii Ech703 DL-methionine transporter permease YP_002986509.1 999992 R 579405 CDS YP_002986510.1 242238329 8090014 complement(1000638..1001669) 1 NC_012880.1 KEGG: sek:SSPA0246 ABC transporter ATP-binding protein; TIGRFAM: D-methionine ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; D-methionine ABC transporter ATPase 1001669 8090014 Dd703_0878 Dickeya dadantii Ech703 D-methionine ABC transporter ATPase YP_002986510.1 1000638 R 579405 CDS YP_002986511.1 242238330 8090015 1001851..1002417 1 NC_012880.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 1002417 8090015 Dd703_0879 Dickeya dadantii Ech703 D,D-heptose 1,7-bisphosphate phosphatase YP_002986511.1 1001851 D 579405 CDS YP_002986512.1 242238331 8090021 1008048..1008161 1 NC_012880.1 KEGG: stm:STM0948 cytoplasmic protein; hypothetical protein 1008161 8090021 Dd703_0880 Dickeya dadantii Ech703 hypothetical protein YP_002986512.1 1008048 D 579405 CDS YP_002986513.1 242238332 8090024 1009910..1011205 1 NC_012880.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA3522 alpha-ketoglutarate transporter; alpha-ketoglutarate transporter 1011205 8090024 Dd703_0883 Dickeya dadantii Ech703 alpha-ketoglutarate transporter YP_002986513.1 1009910 D 579405 CDS YP_002986514.1 242238333 8090025 complement(1011265..1012620) 1 NC_012880.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 1012620 pssA 8090025 pssA Dickeya dadantii Ech703 phosphatidylserine synthase YP_002986514.1 1011265 R 579405 CDS YP_002986515.1 242238334 8090026 complement(1012774..1015437) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: eca:ECA3519 acyl-CoA synthetase; N-acetyltransferase GCN5 1015437 8090026 Dd703_0885 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002986515.1 1012774 R 579405 CDS YP_002986516.1 242238335 8090027 complement(1015471..1016184) 1 NC_012880.1 PFAM: DTW domain containing protein; KEGG: eca:ECA3518 hypothetical protein; DTW domain containing protein 1016184 8090027 Dd703_0886 Dickeya dadantii Ech703 DTW domain containing protein YP_002986516.1 1015471 R 579405 CDS YP_002986517.1 242238336 8090028 complement(1016335..1016760) 1 NC_012880.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: eca:ECA3517 thioredoxin 2; thioredoxin 2 1016760 8090028 Dd703_0887 Dickeya dadantii Ech703 thioredoxin 2 YP_002986517.1 1016335 R 579405 CDS YP_002986518.1 242238337 8090029 1016980..1018029 1 NC_012880.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: spe:Spro_3745 methyltransferase; methyltransferase 1018029 8090029 Dd703_0888 Dickeya dadantii Ech703 methyltransferase YP_002986518.1 1016980 D 579405 CDS YP_002986519.1 242238338 8090030 complement(1018120..1019661) 1 NC_012880.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3513 multidrug resistance protein B; EmrB/QacA subfamily drug resistance transporter 1019661 8090030 Dd703_0889 Dickeya dadantii Ech703 EmrB/QacA subfamily drug resistance transporter YP_002986519.1 1018120 R 579405 CDS YP_002986520.1 242238339 8090031 complement(1019683..1020858) 1 NC_012880.1 TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: eca:ECA3512 multidrug resistance protein A; efflux pump membrane protein 1020858 8090031 Dd703_0890 Dickeya dadantii Ech703 efflux pump membrane protein YP_002986520.1 1019683 R 579405 CDS YP_002986521.1 242238340 8090032 complement(1021099..1021611) 1 NC_012880.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 1021611 8090032 Dd703_0891 Dickeya dadantii Ech703 transcriptional repressor MprA YP_002986521.1 1021099 R 579405 CDS YP_002986522.1 242238341 8090033 complement(1021785..1022126) 1 NC_012880.1 KEGG: eca:ECA3510 hypothetical protein; hypothetical protein 1022126 8090033 Dd703_0892 Dickeya dadantii Ech703 hypothetical protein YP_002986522.1 1021785 R 579405 CDS YP_002986523.1 242238342 8090034 complement(1022123..1022875) 1 NC_012880.1 PFAM: AzlC family protein; KEGG: eca:ECA3509 amino acid transporter; AzlC family protein 1022875 8090034 Dd703_0893 Dickeya dadantii Ech703 AzlC family protein YP_002986523.1 1022123 R 579405 CDS YP_002986524.1 242238343 8090035 complement(1023050..1024249) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3508 transporter; major facilitator superfamily protein 1024249 8090035 Dd703_0894 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986524.1 1023050 R 579405 CDS YP_002986525.1 242238344 8090036 complement(1024632..1025627) 1 NC_012880.1 with ProVW, part of the high-affinity transporter for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 1025627 proX 8090036 proX Dickeya dadantii Ech703 glycine betaine transporter periplasmic subunit YP_002986525.1 1024632 R 579405 CDS YP_002986526.1 242238345 8090037 complement(1025705..1026883) 1 NC_012880.1 with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 1026883 8090037 Dd703_0896 Dickeya dadantii Ech703 glycine betaine transporter membrane protein YP_002986526.1 1025705 R 579405 CDS YP_002986527.1 242238346 8090038 complement(1026876..1028078) 1 NC_012880.1 KEGG: eca:ECA3502 glycine betaine/L-proline transport ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA; glycine/betaine/L-proline ABC transporter ATPase 1028078 8090038 Dd703_0897 Dickeya dadantii Ech703 glycine/betaine/L-proline ABC transporter ATPase YP_002986527.1 1026876 R 579405 CDS YP_002986528.1 242238347 8090039 complement(1028676..1030157) 1 NC_012880.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: kpe:KPK_2569 permease, cytosine/purine, uracil, thiamine, allantoin family; cytosine/purines uracil thiamine allantoin permease 1030157 8090039 Dd703_0898 Dickeya dadantii Ech703 cytosine/purines uracil thiamine allantoin permease YP_002986528.1 1028676 R 579405 CDS YP_002986529.1 242238348 8090040 1030312..1031034 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eta:ETA_26320 transcriptional regulator, GntR family; GntR family transcriptional regulator 1031034 8090040 Dd703_0899 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986529.1 1030312 D 579405 CDS YP_002986530.1 242238349 8090041 1031034..1031768 1 NC_012880.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: spe:Spro_0915 Asp/Glu racemase; Asp/Glu/hydantoin racemase 1031768 8090041 Dd703_0900 Dickeya dadantii Ech703 Asp/Glu/hydantoin racemase YP_002986530.1 1031034 D 579405 CDS YP_002986531.1 242238350 8090042 1031799..1032749 1 NC_012880.1 KEGG: spe:Spro_0916 chitin deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein 1032749 8090042 Dd703_0901 Dickeya dadantii Ech703 urate catabolism protein YP_002986531.1 1031799 D 579405 CDS YP_002986532.1 242238351 8090043 complement(1032952..1033332) 1 NC_012880.1 KEGG: eca:ECA3500 hypothetical protein; hypothetical protein 1033332 8090043 Dd703_0902 Dickeya dadantii Ech703 hypothetical protein YP_002986532.1 1032952 R 579405 CDS YP_002986533.1 242238352 8090044 complement(1033332..1034741) 1 NC_012880.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1034741 8090044 Dd703_0903 Dickeya dadantii Ech703 amidase YP_002986533.1 1033332 R 579405 CDS YP_002986534.1 242238353 8090045 complement(1034738..1034935) 1 NC_012880.1 KEGG: spe:Spro_0929 hypothetical protein; hypothetical protein 1034935 8090045 Dd703_0904 Dickeya dadantii Ech703 hypothetical protein YP_002986534.1 1034738 R 579405 CDS YP_002986535.1 242238354 8090046 complement(1035000..1036589) 1 NC_012880.1 PFAM: gamma-glutamyltranspeptidase; KEGG: eca:ECA3497 gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1036589 8090046 Dd703_0905 Dickeya dadantii Ech703 gamma-glutamyltransferase YP_002986535.1 1035000 R 579405 CDS YP_002986536.1 242238355 8090047 1036753..1037592 1 NC_012880.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: eca:ECA3496 transcriptional regulator; RpiR family transcriptional regulator 1037592 8090047 Dd703_0906 Dickeya dadantii Ech703 RpiR family transcriptional regulator YP_002986536.1 1036753 D 579405 CDS YP_002986537.1 242238356 8090048 1037893..1038657 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA3495 amino acid ABC transporter substrate-binding protein; family 3 extracellular solute-binding protein 1038657 8090048 Dd703_0907 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002986537.1 1037893 D 579405 CDS YP_002986538.1 242238357 8090049 1038667..1039335 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3494 amino acid ABC transporter permease protein; polar amino acid ABC transporter permease 1039335 8090049 Dd703_0908 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002986538.1 1038667 D 579405 CDS YP_002986539.1 242238358 8090050 1039332..1039988 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3493 amino acid ABC transporter permease protein; polar amino acid ABC transporter permease 1039988 8090050 Dd703_0909 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002986539.1 1039332 D 579405 CDS YP_002986540.1 242238359 8090051 1039969..1040700 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3492 amino acid ABC transporter ATP-binding protein; ABC transporter 1040700 8090051 Dd703_0910 Dickeya dadantii Ech703 ABC transporter YP_002986540.1 1039969 D 579405 CDS YP_002986541.1 242238360 8090052 1040865..1042109 1 NC_012880.1 PFAM: aminotransferase class V; KEGG: eca:ECA3491 purine catabolism protein; class V aminotransferase 1042109 8090052 Dd703_0911 Dickeya dadantii Ech703 class V aminotransferase YP_002986541.1 1040865 D 579405 CDS YP_002986542.1 242238361 8090053 1042106..1043356 1 NC_012880.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1043356 8090053 Dd703_0912 Dickeya dadantii Ech703 allantoate amidohydrolase YP_002986542.1 1042106 D 579405 CDS YP_002986543.1 242238362 8090054 complement(1043888..1044538) 1 NC_012880.1 KEGG: rlt:Rleg2_6114 glutathione S-transferase domain; glutathione S-transferase-like protein 1044538 8090054 Dd703_0913 Dickeya dadantii Ech703 glutathione S-transferase-like protein YP_002986543.1 1043888 R 579405 CDS YP_002986544.1 242238363 8090056 complement(1045085..1046125) 1 NC_012880.1 PFAM: Integrase catalytic region; KEGG: son:SO_A0151 ISSod13, transposase; Integrase catalytic subunit 1046125 8090056 Dd703_0915 Dickeya dadantii Ech703 Integrase catalytic subunit YP_002986544.1 1045085 R 579405 CDS YP_002986545.1 242238364 8090057 complement(1047929..1048696) 1 NC_012880.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eca:ECA3489 hypothetical protein; hypothetical protein 1048696 8090057 Dd703_0916 Dickeya dadantii Ech703 hypothetical protein YP_002986545.1 1047929 R 579405 CDS YP_002986546.1 242238365 8090058 complement(1048684..1049841) 1 NC_012880.1 catalyzes the transfer of an amino moiety; aminotransferase 1049841 8090058 Dd703_0917 Dickeya dadantii Ech703 aminotransferase YP_002986546.1 1048684 R 579405 CDS YP_002986547.1 242238366 8090059 1050028..1050645 1 NC_012880.1 catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 1050645 8090059 Dd703_0918 Dickeya dadantii Ech703 methylthioribulose-1-phosphate dehydratase YP_002986547.1 1050028 D 579405 CDS YP_002986548.1 242238367 8090060 1050642..1051334 1 NC_012880.1 KEGG: eca:ECA3486 enolase-phosphatase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1051334 8090060 Dd703_0919 Dickeya dadantii Ech703 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_002986548.1 1050642 D 579405 CDS YP_002986549.1 242238368 8090061 1051349..1051891 1 NC_012880.1 PFAM: acireductone dioxygenase; KEGG: eca:ECA3485 oxidase; acireductone dioxygenase 1051891 8090061 Dd703_0920 Dickeya dadantii Ech703 acireductone dioxygenase YP_002986549.1 1051349 D 579405 CDS YP_002986550.1 242238369 8090062 complement(1051937..1052965) 1 NC_012880.1 KEGG: eca:ECA3477 translation initiation factor EIF-2B; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 1052965 8090062 Dd703_0921 Dickeya dadantii Ech703 translation initiation factor, aIF-2BI family YP_002986550.1 1051937 R 579405 CDS YP_002986551.1 242238370 8090063 1053113..1054315 1 NC_012880.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1054315 mtnK 8090063 mtnK Dickeya dadantii Ech703 methylthioribose kinase YP_002986551.1 1053113 D 579405 CDS YP_002986552.1 242238371 8090064 complement(1054377..1056815) 1 NC_012880.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1056815 fadE 8090064 fadE Dickeya dadantii Ech703 acyl-CoA dehydrogenase YP_002986552.1 1054377 R 579405 CDS YP_002986553.1 242238372 8090065 1057070..1057651 1 NC_012880.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1057651 gmhA 8090065 gmhA Dickeya dadantii Ech703 phosphoheptose isomerase YP_002986553.1 1057070 D 579405 CDS YP_002986554.1 242238373 8090066 1057683..1058450 1 NC_012880.1 PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein; glutamine amidotransferase 1058450 8090066 Dd703_0925 Dickeya dadantii Ech703 glutamine amidotransferase YP_002986554.1 1057683 D 579405 CDS YP_002986555.1 242238374 8090067 complement(1058421..1059170) 1 NC_012880.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eca:ECA3471 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1059170 8090067 Dd703_0926 Dickeya dadantii Ech703 ErfK/YbiS/YcfS/YnhG family protein YP_002986555.1 1058421 R 579405 CDS YP_002986556.1 242238375 8090068 1059541..1060599 1 NC_012880.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1060599 8090068 Dd703_0927 Dickeya dadantii Ech703 DNA polymerase IV YP_002986556.1 1059541 D 579405 CDS YP_002986557.1 242238376 8090069 complement(1060668..1062128) 1 NC_012880.1 KEGG: eca:ECA3467 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 1062128 8090069 Dd703_0928 Dickeya dadantii Ech703 aminoacyl-histidine dipeptidase YP_002986557.1 1060668 R 579405 CDS YP_002986558.1 242238377 8090070 complement(1062318..1062509) 1 NC_012880.1 hypothetical protein 1062509 8090070 Dd703_0929 Dickeya dadantii Ech703 hypothetical protein YP_002986558.1 1062318 R 579405 CDS YP_002986559.1 242238378 8090071 1062745..1063203 1 NC_012880.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1063203 8090071 Dd703_0930 Dickeya dadantii Ech703 xanthine-guanine phosphoribosyltransferase YP_002986559.1 1062745 D 579405 CDS YP_002986560.1 242238379 8090072 1063355..1064602 1 NC_012880.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 1064602 frsA 8090072 frsA Dickeya dadantii Ech703 fermentation/respiration switch protein YP_002986560.1 1063355 D 579405 CDS YP_002986561.1 242238380 8090073 1064702..1065256 1 NC_012880.1 KEGG: ent:Ent638_3082 hypothetical protein; hypothetical protein 1065256 8090073 Dd703_0932 Dickeya dadantii Ech703 hypothetical protein YP_002986561.1 1064702 D 579405 CDS YP_002986562.1 242238381 8090074 1065240..1066511 1 NC_012880.1 KEGG: eum:ECUMN_2929 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1066511 8090074 Dd703_0933 Dickeya dadantii Ech703 diguanylate cyclase YP_002986562.1 1065240 D 579405 CDS YP_002986563.1 242238382 8090075 1066630..1066989 1 NC_012880.1 PFAM: transcriptional regulator Crl; KEGG: spe:Spro_0966 DNA-binding transcriptional regulator Crl; transcriptional regulator Crl 1066989 8090075 Dd703_0934 Dickeya dadantii Ech703 transcriptional regulator Crl YP_002986563.1 1066630 D 579405 CDS YP_002986564.1 242238383 8090076 1067114..1068217 1 NC_012880.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1068217 8090076 Dd703_0935 Dickeya dadantii Ech703 gamma-glutamyl kinase YP_002986564.1 1067114 D 579405 CDS YP_002986565.1 242238384 8090077 1068228..1069481 1 NC_012880.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1069481 proA 8090077 proA Dickeya dadantii Ech703 gamma-glutamyl phosphate reductase YP_002986565.1 1068228 D 579405 CDS YP_002986566.1 242238385 8090079 1070251..1071390 1 NC_012880.1 KEGG: eca:ECA3130 poly(glycerophosphate chain) D-alanine transfer protein; poly(glycerophosphate chain) D-alanine transfer protein 1071390 8090079 Dd703_0937 Dickeya dadantii Ech703 poly(glycerophosphate chain) D-alanine transfer protein YP_002986566.1 1070251 D 579405 CDS YP_002986567.1 242238386 8090080 1071387..1071509 1 NC_012880.1 hypothetical protein 1071509 8090080 Dd703_0938 Dickeya dadantii Ech703 hypothetical protein YP_002986567.1 1071387 D 579405 CDS YP_002986568.1 242238387 8090081 1071520..1072638 1 NC_012880.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: eca:ECA3129 peptidoglycan biosynthesis protein; membrane bound O-acyl transferase MBOAT family protein 1072638 8090081 Dd703_0939 Dickeya dadantii Ech703 membrane bound O-acyl transferase MBOAT family protein YP_002986568.1 1071520 D 579405 CDS YP_002986569.1 242238388 8090082 1072635..1074071 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA3128 D-alanine--poly(phosphoribitol) ligase subunit 1; AMP-dependent synthetase and ligase 1074071 8090082 Dd703_0940 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002986569.1 1072635 D 579405 CDS YP_002986570.1 242238389 8090083 1074090..1074311 1 NC_012880.1 KEGG: eca:ECA3127 acyl carrier protein; acyl carrier protein 1074311 8090083 Dd703_0941 Dickeya dadantii Ech703 acyl carrier protein YP_002986570.1 1074090 D 579405 CDS YP_002986571.1 242238390 8090084 complement(1074460..1075353) 1 NC_012880.1 PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: bam:Bamb_6421 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 1075353 8090084 Dd703_0942 Dickeya dadantii Ech703 2-dehydropantoate 2-reductase YP_002986571.1 1074460 R 579405 CDS YP_002986572.1 242238391 8090085 complement(1075652..1076380) 1 NC_012880.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: sea:SeAg_B1537 GntR domain protein; GntR family transcriptional regulator 1076380 8090085 Dd703_0943 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986572.1 1075652 R 579405 CDS YP_002986573.1 242238392 8090086 complement(1076508..1077560) 1 NC_012880.1 NAD-binding; L-idonate 5-dehydrogenase 1077560 8090086 Dd703_0944 Dickeya dadantii Ech703 L-idonate 5-dehydrogenase YP_002986573.1 1076508 R 579405 CDS YP_002986574.1 242238393 8090087 complement(1077571..1078932) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: sea:SeAg_B1539 probable glucarate transporter; major facilitator superfamily protein 1078932 8090087 Dd703_0945 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986574.1 1077571 R 579405 CDS YP_002986575.1 242238394 8090088 complement(1079033..1079800) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: set:SEN1435 hexonate dehydrogenase; short-chain dehydrogenase/reductase SDR 1079800 8090088 Dd703_0946 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002986575.1 1079033 R 579405 CDS YP_002986576.1 242238395 8090089 1080140..1081393 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: set:SEN1436 dehydratase; mandelate racemase/muconate lactonizing protein 1081393 8090089 Dd703_0947 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002986576.1 1080140 D 579405 CDS YP_002986577.1 242238396 8090090 complement(1081560..1082672) 1 NC_012880.1 PFAM: peptidase M24; creatinase; KEGG: ara:Arad_8261 peptidase protein; peptidase M24 1082672 8090090 Dd703_0948 Dickeya dadantii Ech703 peptidase M24 YP_002986577.1 1081560 R 579405 CDS YP_002986578.1 242238397 8090091 complement(1082669..1083943) 1 NC_012880.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bbt:BBta_3717 acetylornithine deacetylase; peptidase M20 1083943 8090091 Dd703_0949 Dickeya dadantii Ech703 peptidase M20 YP_002986578.1 1082669 R 579405 CDS YP_002986579.1 242238398 8090092 complement(1083906..1085603) 1 NC_012880.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: ara:Arad_8264 peptide ABC transporter; ABC transporter 1085603 8090092 Dd703_0950 Dickeya dadantii Ech703 ABC transporter YP_002986579.1 1083906 R 579405 CDS YP_002986580.1 242238399 8090093 complement(1085603..1086430) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_8265 dipeptide ABC transporter; binding-protein-dependent transporters inner membrane component 1086430 8090093 Dd703_0951 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986580.1 1085603 R 579405 CDS YP_002986581.1 242238400 8090094 complement(1086423..1087370) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bbt:BBta_3714 nickel ABC transporter permease(NikB); binding-protein-dependent transporters inner membrane component 1087370 8090094 Dd703_0952 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986581.1 1086423 R 579405 CDS YP_002986582.1 242238401 8090095 complement(1087385..1088983) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_3713 ABC transporter (substrate binding component); family 5 extracellular solute-binding protein 1088983 8090095 Dd703_0953 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002986582.1 1087385 R 579405 CDS YP_002986583.1 242238402 8088071 complement(1089034..1090314) 1 NC_012880.1 PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: ara:Arad_8269 acetylornithine deacetylase protein; peptidase dimerisation domain-containing protein 1090314 8088071 Dd703_0954 Dickeya dadantii Ech703 peptidase dimerisation domain-containing protein YP_002986583.1 1089034 R 579405 CDS YP_002986584.1 242238403 8088072 1090392..1091165 1 NC_012880.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ara:Arad_8270 transcriptional regulator protein; GntR family transcriptional regulator 1091165 8088072 Dd703_0955 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986584.1 1090392 D 579405 CDS YP_002986585.1 242238404 8088073 1091486..1093177 1 NC_012880.1 KEGG: efe:EFER_2212 sensory kinase in two-component system with YehT; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; signal transduction histidine kinase LytS 1093177 8088073 Dd703_0956 Dickeya dadantii Ech703 signal transduction histidine kinase LytS YP_002986585.1 1091486 D 579405 CDS YP_002986586.1 242238405 8088074 1093171..1093896 1 NC_012880.1 unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT 1093896 8088074 Dd703_0957 Dickeya dadantii Ech703 two-component response-regulatory protein YehT YP_002986586.1 1093171 D 579405 CDS YP_002986587.1 242238406 8088075 1094152..1096302 1 NC_012880.1 PFAM: carbon starvation protein CstA; KEGG: eum:ECUMN_4963 conserved hypothetical protein; inner membrane protein; carbon starvation protein CstA 1096302 8088075 Dd703_0958 Dickeya dadantii Ech703 carbon starvation protein CstA YP_002986587.1 1094152 D 579405 CDS YP_002986588.1 242238407 8088076 1096376..1096579 1 NC_012880.1 PFAM: protein of unknown function DUF466; KEGG: spe:Spro_0581 hypothetical protein; hypothetical protein 1096579 8088076 Dd703_0959 Dickeya dadantii Ech703 hypothetical protein YP_002986588.1 1096376 D 579405 CDS YP_002986589.1 242238408 8088077 1096740..1097702 1 NC_012880.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eca:ECA1189 GTP-binding protein YjiA; GTP-binding protein YjiA 1097702 8088077 Dd703_0960 Dickeya dadantii Ech703 GTP-binding protein YjiA YP_002986589.1 1096740 D 579405 CDS YP_002986590.1 242238409 8088078 complement(1098311..1099513) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: plu:plu0937 hypothetical protein; major facilitator superfamily protein 1099513 8088078 Dd703_0961 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986590.1 1098311 R 579405 CDS YP_002986591.1 242238410 8088079 complement(1099540..1100211) 1 NC_012880.1 PFAM: thymidylate kinase; KEGG: plu:plu0936 hypothetical protein; thymidylate kinase 1100211 8088079 Dd703_0962 Dickeya dadantii Ech703 thymidylate kinase YP_002986591.1 1099540 R 579405 CDS YP_002986592.1 242238411 8088080 complement(1100204..1101346) 1 NC_012880.1 KEGG: plu:plu0935 hypothetical protein; hypothetical protein 1101346 8088080 Dd703_0963 Dickeya dadantii Ech703 hypothetical protein YP_002986592.1 1100204 R 579405 CDS YP_002986593.1 242238412 8088081 complement(1101343..1102191) 1 NC_012880.1 PFAM: inositol monophosphatase; KEGG: plu:plu0934 hypothetical protein; inositol monophosphatase 1102191 8088081 Dd703_0964 Dickeya dadantii Ech703 inositol monophosphatase YP_002986593.1 1101343 R 579405 CDS YP_002986594.1 242238413 8088082 complement(1102637..1103200) 1 NC_012880.1 KEGG: plu:plu0933 hypothetical protein; hypothetical protein 1103200 8088082 Dd703_0965 Dickeya dadantii Ech703 hypothetical protein YP_002986594.1 1102637 R 579405 CDS YP_002986595.1 242238414 8088083 complement(1103220..1104257) 1 NC_012880.1 KEGG: plu:plu0932 hypothetical protein; hypothetical protein 1104257 8088083 Dd703_0966 Dickeya dadantii Ech703 hypothetical protein YP_002986595.1 1103220 R 579405 CDS YP_002986596.1 242238415 8088085 1105219..1105623 1 NC_012880.1 hypothetical protein 1105623 8088085 Dd703_0968 Dickeya dadantii Ech703 hypothetical protein YP_002986596.1 1105219 D 579405 CDS YP_002986597.1 242238416 8088086 1105979..1106455 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: ara:Arad_8648 nucleoside polyphosphate hydrolase protein; NUDIX hydrolase 1106455 8088086 Dd703_0969 Dickeya dadantii Ech703 NUDIX hydrolase YP_002986597.1 1105979 D 579405 CDS YP_002986598.1 242238417 8088087 complement(1106494..1107741) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU27760 sigma-B-transcribed gene; major facilitator superfamily protein 1107741 8088087 Dd703_0970 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986598.1 1106494 R 579405 CDS YP_002986599.1 242238418 8088088 complement(1107852..1109429) 1 NC_012880.1 KEGG: eca:ECA3560 oligogalacturonide transporter; oligogalacturonide transporter 1109429 8088088 Dd703_0971 Dickeya dadantii Ech703 oligogalacturonide transporter YP_002986599.1 1107852 R 579405 CDS YP_002986600.1 242238419 8088089 complement(1109638..1110984) 1 NC_012880.1 PFAM: glycoside hydrolase family 28; SMART: Parallel beta-helix repeat; KEGG: eca:ECA3552 polygalacturonase; glycoside hydrolase family protein 1110984 8088089 Dd703_0972 Dickeya dadantii Ech703 glycoside hydrolase family protein YP_002986600.1 1109638 R 579405 CDS YP_002986601.1 242238420 8088090 1111128..1111259 1 NC_012880.1 hypothetical protein 1111259 8088090 Dd703_0973 Dickeya dadantii Ech703 hypothetical protein YP_002986601.1 1111128 D 579405 CDS YP_002986602.1 242238421 8088091 complement(1111281..1112981) 1 NC_012880.1 KEGG: eca:ECA3550 hypothetical protein; hypothetical protein 1112981 8088091 Dd703_0974 Dickeya dadantii Ech703 hypothetical protein YP_002986602.1 1111281 R 579405 CDS YP_002986603.1 242238422 8088092 complement(1113139..1114329) 1 NC_012880.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1114329 8088092 Dd703_0975 Dickeya dadantii Ech703 mannonate dehydratase YP_002986603.1 1113139 R 579405 CDS YP_002986604.1 242238423 8088093 1114655..1116148 1 NC_012880.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE1438 D-mannonate oxidoreductase; mannitol dehydrogenase 1116148 8088093 Dd703_0976 Dickeya dadantii Ech703 mannitol dehydrogenase YP_002986604.1 1114655 D 579405 CDS YP_002986605.1 242238424 8088094 complement(1116217..1116951) 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA1092 GntR family transcriptional regulator; GntR family transcriptional regulator 1116951 8088094 Dd703_0977 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986605.1 1116217 R 579405 CDS YP_002986606.1 242238425 8088095 complement(1117242..1118930) 1 NC_012880.1 PFAM: peptidase U34 dipeptidase; KEGG: dal:Dalk_1471 peptidase U34 dipeptidase; peptidase U34 dipeptidase 1118930 8088095 Dd703_0978 Dickeya dadantii Ech703 peptidase U34 dipeptidase YP_002986606.1 1117242 R 579405 CDS YP_002986607.1 242238426 8088096 complement(1119028..1120452) 1 NC_012880.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: bxe:Bxe_C0076 phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 1120452 8088096 Dd703_0979 Dickeya dadantii Ech703 phosphatidylserine decarboxylase YP_002986607.1 1119028 R 579405 CDS YP_002986608.1 242238427 8088097 1120965..1121906 1 NC_012880.1 KEGG: bav:BAV3207 poly(aspartic acid) hydrolase; hypothetical protein 1121906 8088097 Dd703_0980 Dickeya dadantii Ech703 hypothetical protein YP_002986608.1 1120965 D 579405 CDS YP_002986609.1 242238428 8088098 complement(1122077..1123066) 1 NC_012880.1 membrane component of a sugar ABC transporter system; inner membrane ABC transporter permease YjfF 1123066 8088098 Dd703_0981 Dickeya dadantii Ech703 inner membrane ABC transporter permease YjfF YP_002986609.1 1122077 R 579405 CDS YP_002986610.1 242238429 8088099 complement(1123053..1124075) 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: eum:ECUMN_4763 sugar transporter subunit: membrane component of ABC superfamily; inner-membrane translocator 1124075 8088099 Dd703_0982 Dickeya dadantii Ech703 inner-membrane translocator YP_002986610.1 1123053 R 579405 CDS YP_002986611.1 242238430 8088100 complement(1124089..1125594) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpe:KPK_5042 sugar ABC transporter ATP-binding protein; ABC transporter 1125594 8088100 Dd703_0983 Dickeya dadantii Ech703 ABC transporter YP_002986611.1 1124089 R 579405 CDS YP_002986612.1 242238431 8088101 complement(1125694..1126650) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecd:ECDH10B_4422 sugar ABC transporter periplasmic-binding protein; periplasmic binding protein/LacI transcriptional regulator 1126650 8088101 Dd703_0984 Dickeya dadantii Ech703 periplasmic binding protein/LacI transcriptional regulator YP_002986612.1 1125694 R 579405 CDS YP_002986613.1 242238432 8088102 complement(1127312..1127881) 1 NC_012880.1 PFAM: PEBP family protein; KEGG: rfr:Rfer_3962 YbcL; PEBP family protein 1127881 8088102 Dd703_0985 Dickeya dadantii Ech703 PEBP family protein YP_002986613.1 1127312 R 579405 CDS YP_002986614.1 242238433 8088103 1127997..1128836 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spe:Spro_2944 AraC family transcriptional regulator; AraC family transcriptional regulator 1128836 8088103 Dd703_0986 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986614.1 1127997 D 579405 CDS YP_002986615.1 242238434 8088104 1128925..1129857 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_1938 hypothetical protein; hypothetical protein 1129857 8088104 Dd703_0987 Dickeya dadantii Ech703 hypothetical protein YP_002986615.1 1128925 D 579405 CDS YP_002986616.1 242238435 8088105 complement(1129930..1130835) 1 NC_012880.1 KEGG: rpi:Rpic_2604 hypothetical protein; hypothetical protein 1130835 8088105 Dd703_0988 Dickeya dadantii Ech703 hypothetical protein YP_002986616.1 1129930 R 579405 CDS YP_002986617.1 242238436 8088106 1131410..1131505 1 NC_012880.1 hypothetical protein 1131505 8088106 Dd703_0989 Dickeya dadantii Ech703 hypothetical protein YP_002986617.1 1131410 D 579405 CDS YP_002986618.1 242238437 8088107 complement(1131734..1132507) 1 NC_012880.1 TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ent:Ent638_2028 acetoin reductase; acetoin reductase 1132507 8088107 Dd703_0990 Dickeya dadantii Ech703 acetoin reductase YP_002986618.1 1131734 R 579405 CDS YP_002986619.1 242238438 8088108 1132863..1133516 1 NC_012880.1 hypothetical protein 1133516 8088108 Dd703_0991 Dickeya dadantii Ech703 hypothetical protein YP_002986619.1 1132863 D 579405 CDS YP_002986620.1 242238439 8088109 1133528..1134226 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: eta:ETA_25920 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1134226 8088109 Dd703_0992 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002986620.1 1133528 D 579405 CDS YP_002986621.1 242238440 8088110 1134620..1135153 1 NC_012880.1 PFAM: cytochrome B561; KEGG: eca:ECA0823 cytochrome b561; cytochrome B561 1135153 8088110 Dd703_0993 Dickeya dadantii Ech703 cytochrome B561 YP_002986621.1 1134620 D 579405 CDS YP_002986622.1 242238441 8088111 complement(1135313..1135807) 1 NC_012880.1 PFAM: cyclase/dehydrase; KEGG: eca:ECA3372 hypothetical protein; cyclase/dehydrase 1135807 8088111 Dd703_0994 Dickeya dadantii Ech703 cyclase/dehydrase YP_002986622.1 1135313 R 579405 CDS YP_002986623.1 242238442 8088112 1137404..1137922 1 NC_012880.1 PFAM: damage inducible protein CinA; KEGG: eca:ECA3370 competence damage-inducible protein A; competence damage-inducible protein A 1137922 8088112 Dd703_0995 Dickeya dadantii Ech703 competence damage-inducible protein A YP_002986623.1 1137404 D 579405 CDS YP_002986624.1 242238443 8088113 1138027..1139118 1 NC_012880.1 KEGG: eca:ECA3369 recombinase A; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA; recA protein 1139118 8088113 Dd703_0996 Dickeya dadantii Ech703 recA protein YP_002986624.1 1138027 D 579405 CDS YP_002986625.1 242238444 8088114 1139154..1139642 1 NC_012880.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1139642 recX 8088114 recX Dickeya dadantii Ech703 recombination regulator RecX YP_002986625.1 1139154 D 579405 CDS YP_002986626.1 242238445 8088115 1139780..1142407 1 NC_012880.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1142407 alaS 8088115 alaS Dickeya dadantii Ech703 alanyl-tRNA synthetase YP_002986626.1 1139780 D 579405 CDS YP_002986627.1 242238446 8088116 1142732..1142917 1 NC_012880.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1142917 8088116 Dd703_0999 Dickeya dadantii Ech703 carbon storage regulator YP_002986627.1 1142732 D 579405 CDS YP_002986628.1 242238447 8088121 1143857..1144423 1 NC_012880.1 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 1144423 8088121 Dd703_1000 Dickeya dadantii Ech703 fructose-1-phosphatase YP_002986628.1 1143857 D 579405 CDS YP_002986629.1 242238448 8088122 1144420..1144851 1 NC_012880.1 KEGG: eca:ECA3364 hypothetical protein; hypothetical protein 1144851 8088122 Dd703_1001 Dickeya dadantii Ech703 hypothetical protein YP_002986629.1 1144420 D 579405 CDS YP_002986630.1 242238449 8088123 1144925..1146481 1 NC_012880.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 1146481 8088123 Dd703_1002 Dickeya dadantii Ech703 glutamate--cysteine ligase YP_002986630.1 1144925 D 579405 CDS YP_002986631.1 242238450 8088124 1146636..1147151 1 NC_012880.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1147151 8088124 Dd703_1003 Dickeya dadantii Ech703 S-ribosylhomocysteinase YP_002986631.1 1146636 D 579405 CDS YP_002986632.1 242238451 8088126 complement(1148642..1149505) 1 NC_012880.1 KEGG: eca:ECA1162 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 1149505 8088126 Dd703_1005 Dickeya dadantii Ech703 acyl-CoA thioesterase II YP_002986632.1 1148642 R 579405 CDS YP_002986633.1 242238452 8088127 1149729..1150295 1 NC_012880.1 KEGG: eca:ECA1163 lipoprotein; lipoprotein 1150295 8088127 Dd703_1006 Dickeya dadantii Ech703 lipoprotein YP_002986633.1 1149729 D 579405 CDS YP_002986634.1 242238453 8088128 complement(1150341..1150658) 1 NC_012880.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: yps:YPTB0977 6-O-methylguanine DNA methyltransferase family protein; methylated-DNA--protein-cysteine methyltransferase 1150658 8088128 Dd703_1007 Dickeya dadantii Ech703 methylated-DNA--protein-cysteine methyltransferase YP_002986634.1 1150341 R 579405 CDS YP_002986635.1 242238454 8088130 complement(1151294..1151497) 1 NC_012880.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 1151497 8088130 Dd703_1008 Dickeya dadantii Ech703 hemolysin expression-modulating protein YP_002986635.1 1151294 R 579405 CDS YP_002986636.1 242238455 8088131 complement(1151547..1151915) 1 NC_012880.1 KEGG: eca:ECA1166 hypothetical protein; hypothetical protein 1151915 8088131 Dd703_1009 Dickeya dadantii Ech703 hypothetical protein YP_002986636.1 1151547 R 579405 CDS YP_002986637.1 242238456 8088132 complement(1152821..1155964) 1 NC_012880.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: eca:ECA1169 acriflavin resistance protein B; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1155964 8088132 Dd703_1010 Dickeya dadantii Ech703 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_002986637.1 1152821 R 579405 CDS YP_002986638.1 242238457 8088133 complement(1155981..1157168) 1 NC_012880.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: eca:ECA1170 acriflavine resistance protein A; RND family efflux transporter MFP subunit 1157168 8088133 Dd703_1011 Dickeya dadantii Ech703 RND family efflux transporter MFP subunit YP_002986638.1 1155981 R 579405 CDS YP_002986639.1 242238458 8088134 1157311..1157949 1 NC_012880.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain protein; regulatory protein TetR; KEGG: eca:ECA1171 DNA-binding transcriptional repressor AcrR; TetR family transcriptional regulator 1157949 8088134 Dd703_1012 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002986639.1 1157311 D 579405 CDS YP_002986640.1 242238459 8088135 1158207..1161593 1 NC_012880.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 1161593 8088135 Dd703_1013 Dickeya dadantii Ech703 potassium efflux protein KefA YP_002986640.1 1158207 D 579405 CDS YP_002986641.1 242238460 8088136 complement(1161640..1161804) 1 NC_012880.1 KEGG: eca:ECA1172 hypothetical protein; hypothetical protein 1161804 8088136 Dd703_1014 Dickeya dadantii Ech703 hypothetical protein YP_002986641.1 1161640 R 579405 CDS YP_002986642.1 242238461 8088137 complement(1161829..1162365) 1 NC_012880.1 PFAM: Primosomal replication priB and priC; KEGG: eca:ECA1173 primosomal replication protein N''; primosomal replication priB and priC 1162365 8088137 Dd703_1015 Dickeya dadantii Ech703 primosomal replication priB and priC YP_002986642.1 1161829 R 579405 CDS YP_002986643.1 242238462 8088138 complement(1162406..1163164) 1 NC_012880.1 PFAM: tRNA-hydroxylase; KEGG: vfm:VFMJ11_1585 tRNA-hydroxylase; tRNA-hydroxylase 1163164 8088138 Dd703_1016 Dickeya dadantii Ech703 tRNA-hydroxylase YP_002986643.1 1162406 R 579405 CDS YP_002986644.1 242238463 8088139 1163258..1163638 1 NC_012880.1 PFAM: protein of unknown function DUF454; KEGG: eca:ECA1174 hypothetical protein; hypothetical protein 1163638 8088139 Dd703_1017 Dickeya dadantii Ech703 hypothetical protein YP_002986644.1 1163258 D 579405 CDS YP_002986645.1 242238464 8088140 1163930..1164478 1 NC_012880.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1164478 8088140 Dd703_1018 Dickeya dadantii Ech703 adenine phosphoribosyltransferase YP_002986645.1 1163930 D 579405 CDS YP_002986646.1 242238465 8088141 1164553..1166547 1 NC_012880.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1166547 8088141 Dd703_1019 Dickeya dadantii Ech703 DNA polymerase III subunits gamma and tau YP_002986646.1 1164553 D 579405 CDS YP_002986647.1 242238466 8088142 1166589..1166918 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: stt:t2375 hypothetical protein; hypothetical protein 1166918 8088142 Dd703_1020 Dickeya dadantii Ech703 hypothetical protein YP_002986647.1 1166589 D 579405 CDS YP_002986648.1 242238467 8088143 1166918..1167523 1 NC_012880.1 KEGG: spe:Spro_1137 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; recombination protein RecR 1167523 8088143 Dd703_1021 Dickeya dadantii Ech703 recombination protein RecR YP_002986648.1 1166918 D 579405 CDS YP_002986649.1 242238468 8088144 1167700..1169589 1 NC_012880.1 molecular chaperone; heat shock protein 90 1169589 8088144 Dd703_1022 Dickeya dadantii Ech703 heat shock protein 90 YP_002986649.1 1167700 D 579405 CDS YP_002986650.1 242238469 8088145 1169631..1169810 1 NC_012880.1 hypothetical protein 1169810 8088145 Dd703_1023 Dickeya dadantii Ech703 hypothetical protein YP_002986650.1 1169631 D 579405 CDS YP_002986651.1 242238470 8088146 1169989..1170633 1 NC_012880.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: spe:Spro_1139 nucleoside-triphosphate--adenylate kinase; adenylate kinase 1170633 8088146 Dd703_1024 Dickeya dadantii Ech703 adenylate kinase YP_002986651.1 1169989 D 579405 CDS YP_002986652.1 242238471 8088147 1170942..1171904 1 NC_012880.1 KEGG: eca:ECA1181 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase; ferrochelatase 1171904 8088147 Dd703_1025 Dickeya dadantii Ech703 ferrochelatase YP_002986652.1 1170942 D 579405 CDS YP_002986653.1 242238472 8088148 complement(1171962..1173650) 1 NC_012880.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein 1173650 8088148 Dd703_1026 Dickeya dadantii Ech703 cation:proton antiport protein YP_002986653.1 1171962 R 579405 CDS YP_002986654.1 242238473 8088149 1174221..1175873 1 NC_012880.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 1175873 ushA 8088149 ushA Dickeya dadantii Ech703 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_002986654.1 1174221 D 579405 CDS YP_002986655.1 242238474 8088150 1176538..1178136 1 NC_012880.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: bac:BamMC406_6172 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 1178136 8088150 Dd703_1028 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_002986655.1 1176538 D 579405 CDS YP_002986656.1 242238475 8088151 complement(1178334..1178813) 1 NC_012880.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: eca:ECA1191 hypothetical protein; hypothetical protein 1178813 8088151 Dd703_1029 Dickeya dadantii Ech703 hypothetical protein YP_002986656.1 1178334 R 579405 CDS YP_002986657.1 242238476 8087585 complement(1178894..1179721) 1 NC_012880.1 KEGG: eca:ECA1192 hypothetical protein; hypothetical protein 1179721 8087585 Dd703_1030 Dickeya dadantii Ech703 hypothetical protein YP_002986657.1 1178894 R 579405 CDS YP_002986658.1 242238477 8087586 complement(1179924..1182665) 1 NC_012880.1 TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA1193 copper exporting ATPase; copper-translocating P-type ATPase 1182665 8087586 Dd703_1031 Dickeya dadantii Ech703 copper-translocating P-type ATPase YP_002986658.1 1179924 R 579405 CDS YP_002986659.1 242238478 8087587 1182780..1183214 1 NC_012880.1 KEGG: spe:Spro_1151 MerR family transcriptional regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 1183214 8087587 Dd703_1032 Dickeya dadantii Ech703 MerR family transcriptional regulator YP_002986659.1 1182780 D 579405 CDS YP_002986660.1 242238479 8087588 complement(1183290..1183739) 1 NC_012880.1 PFAM: protein of unknown function DUF107; KEGG: eca:ECA1195 hypothetical protein; hypothetical protein 1183739 8087588 Dd703_1033 Dickeya dadantii Ech703 hypothetical protein YP_002986660.1 1183290 R 579405 CDS YP_002986661.1 242238480 8087589 complement(1183732..1184655) 1 NC_012880.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: eca:ECA1196 hypothetical protein; hypothetical protein 1184655 8087589 Dd703_1034 Dickeya dadantii Ech703 hypothetical protein YP_002986661.1 1183732 R 579405 CDS YP_002986662.1 242238481 8087590 complement(1184812..1185072) 1 NC_012880.1 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin 1185072 8087590 Dd703_1035 Dickeya dadantii Ech703 2Fe-2S ferredoxin YP_002986662.1 1184812 R 579405 CDS YP_002986663.1 242238482 8087591 complement(1185078..1186208) 1 NC_012880.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 1186208 nrdB 8087591 nrdB Dickeya dadantii Ech703 ribonucleotide-diphosphate reductase subunit beta YP_002986663.1 1185078 R 579405 CDS YP_002986664.1 242238483 8087592 complement(1186431..1188719) 1 NC_012880.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1188719 8087592 Dd703_1037 Dickeya dadantii Ech703 ribonucleotide-diphosphate reductase subunit alpha YP_002986664.1 1186431 R 579405 CDS YP_002986665.1 242238484 8087593 complement(1189201..1189935) 1 NC_012880.1 KEGG: eca:ECA1200 3-demethylubiquinone-9 3-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase type 11; methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase 1189935 8087593 Dd703_1038 Dickeya dadantii Ech703 ubiquinone biosynthesis O-methyltransferase YP_002986665.1 1189201 R 579405 CDS YP_002986666.1 242238485 8087594 1190150..1192786 1 NC_012880.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1192786 8087594 Dd703_1039 Dickeya dadantii Ech703 DNA gyrase subunit A YP_002986666.1 1190150 D 579405 CDS YP_002986667.1 242238486 8087595 1192952..1195756 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: eca:ECA1202 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 1195756 8087595 Dd703_1040 Dickeya dadantii Ech703 hybrid sensory kinase in two-component regulatory system with RcsB and YojN YP_002986667.1 1192952 D 579405 CDS YP_002986668.1 242238487 8087596 complement(1195815..1196471) 1 NC_012880.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 1196471 8087596 Dd703_1041 Dickeya dadantii Ech703 transcriptional regulator RcsB YP_002986668.1 1195815 R 579405 CDS YP_002986669.1 242238488 8087597 complement(1196478..1199147) 1 NC_012880.1 KEGG: eca:ECA1204 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: Hpt domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 1199147 8087597 Dd703_1042 Dickeya dadantii Ech703 phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_002986669.1 1196478 R 579405 CDS YP_002986670.1 242238489 8087598 1199749..1199937 1 NC_012880.1 hypothetical protein 1199937 8087598 Dd703_1043 Dickeya dadantii Ech703 hypothetical protein YP_002986670.1 1199749 D 579405 CDS YP_002986671.1 242238490 8087599 1200252..1201574 1 NC_012880.1 TIGRFAM: isochorismate synthase; PFAM: chorismate binding-like; KEGG: eca:ECA1210 menaquinone-specific isochorismate synthase; isochorismate synthase 1201574 8087599 Dd703_1044 Dickeya dadantii Ech703 isochorismate synthase YP_002986671.1 1200252 D 579405 CDS YP_002986672.1 242238491 8087600 1201754..1203433 1 NC_012880.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1203433 8087600 Dd703_1045 Dickeya dadantii Ech703 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_002986672.1 1201754 D 579405 CDS YP_002986673.1 242238492 8087601 1203433..1204203 1 NC_012880.1 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB 1204203 8087601 Dd703_1046 Dickeya dadantii Ech703 acyl-CoA thioester hydrolase YfbB YP_002986673.1 1203433 D 579405 CDS YP_002986674.1 242238493 8087602 1204209..1205066 1 NC_012880.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 1205066 8087602 Dd703_1047 Dickeya dadantii Ech703 naphthoate synthase YP_002986674.1 1204209 D 579405 CDS YP_002986675.1 242238494 8087603 1205066..1206034 1 NC_012880.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 1206034 8087603 Dd703_1048 Dickeya dadantii Ech703 O-succinylbenzoate synthase YP_002986675.1 1205066 D 579405 CDS YP_002986676.1 242238495 8087604 1206022..1207407 1 NC_012880.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA1215 O-succinylbenzoic acid--CoA ligase; O-succinylbenzoic acid--CoA ligase 1207407 8087604 Dd703_1049 Dickeya dadantii Ech703 O-succinylbenzoic acid--CoA ligase YP_002986676.1 1206022 D 579405 CDS YP_002986677.1 242238496 8087605 1207758..1208306 1 NC_012880.1 PFAM: YfaZ family protein; KEGG: eca:ECA1217 hypothetical protein; hypothetical protein 1208306 8087605 Dd703_1050 Dickeya dadantii Ech703 hypothetical protein YP_002986677.1 1207758 D 579405 CDS YP_002986678.1 242238497 8087606 1208654..1209847 1 NC_012880.1 TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis protein; PFAM: molybdopterin binding domain; KEGG: eca:ECA1219 competence damage-inducible protein A; competence damage-inducible protein A 1209847 8087606 Dd703_1051 Dickeya dadantii Ech703 competence damage-inducible protein A YP_002986678.1 1208654 D 579405 CDS YP_002986679.1 242238498 8087607 complement(1209911..1210771) 1 NC_012880.1 PFAM: thioredoxin domain; KEGG: eca:ECA1220 thioredoxin; thioredoxin 1210771 8087607 Dd703_1052 Dickeya dadantii Ech703 thioredoxin YP_002986679.1 1209911 R 579405 CDS YP_002986680.1 242238499 8087608 complement(1210835..1211611) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA1221 short chain dehydrogenase; short chain dehydrogenase 1211611 8087608 Dd703_1053 Dickeya dadantii Ech703 short chain dehydrogenase YP_002986680.1 1210835 R 579405 CDS YP_002986681.1 242238500 8087609 complement(1211641..1212279) 1 NC_012880.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ecq:ECED1_0521 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; lysophospholipase 1212279 8087609 Dd703_1054 Dickeya dadantii Ech703 lysophospholipase YP_002986681.1 1211641 R 579405 CDS YP_002986682.1 242238501 8087610 1212247..1212933 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: spe:Spro_1158 ABC transporter ATP-binding protein YbbA; ABC transporter 1212933 8087610 Dd703_1055 Dickeya dadantii Ech703 ABC transporter YP_002986682.1 1212247 D 579405 CDS YP_002986683.1 242238502 8087611 1212930..1215362 1 NC_012880.1 PFAM: protein of unknown function DUF214; KEGG: eca:ECA1224 hypothetical protein; hypothetical protein 1215362 8087611 Dd703_1056 Dickeya dadantii Ech703 hypothetical protein YP_002986683.1 1212930 D 579405 CDS YP_002986684.1 242238503 8087612 complement(1215489..1217648) 1 NC_012880.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spe:Spro_1016 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 1217648 8087612 Dd703_1057 Dickeya dadantii Ech703 TonB-dependent siderophore receptor YP_002986684.1 1215489 R 579405 CDS YP_002986685.1 242238504 8087613 complement(1217638..1218750) 1 NC_012880.1 PFAM: periplasmic binding protein; KEGG: yen:YE3190 hypothetical protein; periplasmic binding protein 1218750 8087613 Dd703_1058 Dickeya dadantii Ech703 periplasmic binding protein YP_002986685.1 1217638 R 579405 CDS YP_002986686.1 242238505 8087614 complement(1219154..1220164) 1 NC_012880.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane protein 1220164 mglC 8087614 mglC Dickeya dadantii Ech703 beta-methylgalactoside transporter inner membrane protein YP_002986686.1 1219154 R 579405 CDS YP_002986687.1 242238506 8087615 complement(1220184..1221704) 1 NC_012880.1 with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 1221704 8087615 Dd703_1060 Dickeya dadantii Ech703 galactose/methyl galaxtoside transporter ATP-binding protein YP_002986687.1 1220184 R 579405 CDS YP_002986688.1 242238507 8087616 complement(1221826..1222821) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2815 galactose-binding protein; periplasmic binding protein/LacI transcriptional regulator 1222821 8087616 Dd703_1061 Dickeya dadantii Ech703 periplasmic binding protein/LacI transcriptional regulator YP_002986688.1 1221826 R 579405 CDS YP_002986689.1 242238508 8087617 complement(1223135..1224175) 1 NC_012880.1 negative regulator of the mglBAC operon for galactose utilization; DNA-binding transcriptional regulator GalS 1224175 8087617 Dd703_1062 Dickeya dadantii Ech703 DNA-binding transcriptional regulator GalS YP_002986689.1 1223135 R 579405 CDS YP_002986690.1 242238509 8087618 complement(1224516..1225154) 1 NC_012880.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: ypg:YpAngola_A3119 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1225154 8087618 Dd703_1063 Dickeya dadantii Ech703 phosphoribosylglycinamide formyltransferase YP_002986690.1 1224516 R 579405 CDS YP_002986691.1 242238510 8087619 complement(1225154..1226191) 1 NC_012880.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1226191 8087619 Dd703_1064 Dickeya dadantii Ech703 phosphoribosylaminoimidazole synthetase YP_002986691.1 1225154 R 579405 CDS YP_002986692.1 242238511 8087620 1226423..1227049 1 NC_012880.1 KEGG: eca:ECA1255 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 1227049 8087620 Dd703_1065 Dickeya dadantii Ech703 uracil phosphoribosyltransferase YP_002986692.1 1226423 D 579405 CDS YP_002986693.1 242238512 8087621 1227325..1228614 1 NC_012880.1 TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: spe:Spro_3522 uracil transporter; uracil transporter 1228614 8087621 Dd703_1066 Dickeya dadantii Ech703 uracil transporter YP_002986693.1 1227325 D 579405 CDS YP_002986694.1 242238513 8087622 1228726..1229433 1 NC_012880.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 1229433 8087622 Dd703_1067 Dickeya dadantii Ech703 DNA replication initiation factor YP_002986694.1 1228726 D 579405 CDS YP_002986695.1 242238514 8087623 complement(1229461..1229817) 1 NC_012880.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: spe:Spro_3518 arsenate reductase; arsenate reductase 1229817 8087623 Dd703_1068 Dickeya dadantii Ech703 arsenate reductase YP_002986695.1 1229461 R 579405 CDS YP_002986696.1 242238515 8087624 complement(1229834..1231300) 1 NC_012880.1 PFAM: peptidase M48 Ste24p; KEGG: eca:ECA1259 hypothetical protein; peptidase M48 Ste24p 1231300 8087624 Dd703_1069 Dickeya dadantii Ech703 peptidase M48 Ste24p YP_002986696.1 1229834 R 579405 CDS YP_002986697.1 242238516 8087625 complement(1231496..1231963) 1 NC_012880.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 1231963 bcp 8087625 bcp Dickeya dadantii Ech703 thioredoxin-dependent thiol peroxidase YP_002986697.1 1231496 R 579405 CDS YP_002986698.1 242238517 8087626 complement(1231966..1232535) 1 NC_012880.1 PFAM: amino acid-binding ACT domain protein; KEGG: eca:ECA1261 glycine cleavage system transcriptional repressor; amino acid-binding ACT domain-containing protein 1232535 8087626 Dd703_1071 Dickeya dadantii Ech703 amino acid-binding ACT domain-containing protein YP_002986698.1 1231966 R 579405 CDS YP_002986699.1 242238518 8087627 1232683..1233561 1 NC_012880.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1233561 8087627 Dd703_1072 Dickeya dadantii Ech703 dihydrodipicolinate synthase YP_002986699.1 1232683 D 579405 CDS YP_002986700.1 242238519 8087628 1233577..1234617 1 NC_012880.1 PFAM: NlpBDapX family lipoprotein; KEGG: eca:ECA1263 lipoprotein; lipoprotein 1234617 8087628 Dd703_1073 Dickeya dadantii Ech703 lipoprotein YP_002986700.1 1233577 D 579405 CDS YP_002986701.1 242238520 8087629 1234726..1235439 1 NC_012880.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1235439 8087629 Dd703_1074 Dickeya dadantii Ech703 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002986701.1 1234726 D 579405 CDS YP_002986702.1 242238521 8087630 1235589..1236041 1 NC_012880.1 PFAM: protein of unknown function DUF441; KEGG: eca:ECA1265 hypothetical protein; hypothetical protein 1236041 8087630 Dd703_1075 Dickeya dadantii Ech703 hypothetical protein YP_002986702.1 1235589 D 579405 CDS YP_002986703.1 242238522 8087631 1236062..1238089 1 NC_012880.1 PFAM: protein of unknown function DUF699 ATPase ; GCN5-related N-acetyltransferase; KEGG: eca:ECA1266 acetyltransferase; hypothetical protein 1238089 8087631 Dd703_1076 Dickeya dadantii Ech703 hypothetical protein YP_002986703.1 1236062 D 579405 CDS YP_002986704.1 242238523 8087632 1238398..1239084 1 NC_012880.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH 1239084 8087632 Dd703_1077 Dickeya dadantii Ech703 esterase YpfH YP_002986704.1 1238398 D 579405 CDS YP_002986705.1 242238524 8087633 complement(1239252..1239440) 1 NC_012880.1 KEGG: ypg:YpAngola_A3139 hypothetical protein; hypothetical protein 1239440 8087633 Dd703_1078 Dickeya dadantii Ech703 hypothetical protein YP_002986705.1 1239252 R 579405 CDS YP_002986706.1 242238525 8087634 complement(1239437..1240117) 1 NC_012880.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: eca:ECA1290 D-alanyl-D-alanine carboxypeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 1240117 8087634 Dd703_1079 Dickeya dadantii Ech703 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_002986706.1 1239437 R 579405 CDS YP_002986707.1 242238526 8087635 complement(1240114..1241241) 1 NC_012880.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1241241 8087635 Dd703_1080 Dickeya dadantii Ech703 succinyl-diaminopimelate desuccinylase YP_002986707.1 1240114 R 579405 CDS YP_002986708.1 242238527 8087636 complement(1241243..1241605) 1 NC_012880.1 PFAM: arsenate reductase; KEGG: esa:ESA_00779 hypothetical protein; arsenate reductase 1241605 8087636 Dd703_1081 Dickeya dadantii Ech703 arsenate reductase YP_002986708.1 1241243 R 579405 CDS YP_002986709.1 242238528 8087637 complement(1242201..1242914) 1 NC_012880.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: eca:ECA1293 aspartate/glutamate racemase; aspartate racemase 1242914 8087637 Dd703_1082 Dickeya dadantii Ech703 aspartate racemase YP_002986709.1 1242201 R 579405 CDS YP_002986710.1 242238529 8087638 1243142..1243351 1 NC_012880.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eta:ETA_23620 cold shock-like protein; cold-shock DNA-binding domain-containing protein 1243351 8087638 Dd703_1083 Dickeya dadantii Ech703 cold-shock DNA-binding domain-containing protein YP_002986710.1 1243142 D 579405 CDS YP_002986711.1 242238530 8087639 complement(1243408..1243791) 1 NC_012880.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: eca:ECA1295 hypothetical protein; CrcB protein 1243791 8087639 Dd703_1084 Dickeya dadantii Ech703 CrcB protein YP_002986711.1 1243408 R 579405 CDS YP_002986712.1 242238531 8087640 1244270..1244467 1 NC_012880.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: efe:EFER_2477 TatABCE protein translocation system subunit; twin-arginine translocation protein, TatA/E family subunit 1244467 8087640 Dd703_1085 Dickeya dadantii Ech703 twin-arginine translocation protein, TatA/E family subunit YP_002986712.1 1244270 D 579405 CDS YP_002986713.1 242238532 8087641 complement(1244572..1245537) 1 NC_012880.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1245537 8087641 Dd703_1086 Dickeya dadantii Ech703 lipoyl synthase YP_002986713.1 1244572 R 579405 CDS YP_002986714.1 242238533 8087642 complement(1245719..1246408) 1 NC_012880.1 KEGG: eca:ECA1298 lipoyltransferase; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 1246408 8087642 Dd703_1087 Dickeya dadantii Ech703 lipoate-protein ligase B YP_002986714.1 1245719 R 579405 CDS YP_002986715.1 242238534 8087643 complement(1246501..1246764) 1 NC_012880.1 PFAM: protein of unknown function DUF493; KEGG: eca:ECA1299 hypothetical protein; hypothetical protein 1246764 8087643 Dd703_1088 Dickeya dadantii Ech703 hypothetical protein YP_002986715.1 1246501 R 579405 CDS YP_002986716.1 242238535 8087644 complement(1246903..1248114) 1 NC_012880.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase 1248114 8087644 Dd703_1089 Dickeya dadantii Ech703 D-alanyl-D-alanine carboxypeptidase YP_002986716.1 1246903 R 579405 CDS YP_002986717.1 242238536 8087645 complement(1248291..1249457) 1 NC_012880.1 TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; sporulation domain protein; KEGG: eca:ECA1301 lipoprotein A; lipoprotein A 1249457 8087645 Dd703_1090 Dickeya dadantii Ech703 lipoprotein A YP_002986717.1 1248291 R 579405 CDS YP_002986718.1 242238537 8087646 complement(1249467..1250579) 1 NC_012880.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: eca:ECA1302 cell wall shape-determining protein; cell wall shape-determining protein 1250579 8087646 Dd703_1091 Dickeya dadantii Ech703 cell wall shape-determining protein YP_002986718.1 1249467 R 579405 CDS YP_002986719.1 242238538 8087647 complement(1250588..1252492) 1 NC_012880.1 KEGG: eca:ECA1303 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 1252492 8087647 Dd703_1092 Dickeya dadantii Ech703 penicillin-binding protein 2 YP_002986719.1 1250588 R 579405 CDS YP_002986720.1 242238539 8087648 complement(1252530..1253000) 1 NC_012880.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1253000 8087648 Dd703_1093 Dickeya dadantii Ech703 rRNA large subunit methyltransferase YP_002986720.1 1252530 R 579405 CDS YP_002986721.1 242238540 8087649 complement(1253002..1253319) 1 NC_012880.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: esa:ESA_02690 hypothetical protein; hypothetical protein 1253319 8087649 Dd703_1094 Dickeya dadantii Ech703 hypothetical protein YP_002986721.1 1253002 R 579405 CDS YP_002986722.1 242238541 8087650 complement(1253481..1254140) 1 NC_012880.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1254140 nadD 8087650 nadD Dickeya dadantii Ech703 nicotinic acid mononucleotide adenylyltransferase YP_002986722.1 1253481 R 579405 CDS YP_002986723.1 242238542 8087651 complement(1254145..1255176) 1 NC_012880.1 required for the assembly and function of the DNAX complex which is required for the assembly of the subunit beta onto primed DNA; DNA polymerase III subunit delta 1255176 holA 8087651 holA Dickeya dadantii Ech703 DNA polymerase III subunit delta YP_002986723.1 1254145 R 579405 CDS YP_002986724.1 242238543 8087652 complement(1255173..1255721) 1 NC_012880.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 1255721 8087652 Dd703_1097 Dickeya dadantii Ech703 LPS-assembly lipoprotein RlpB YP_002986724.1 1255173 R 579405 CDS YP_002986725.1 242238544 8087653 complement(1255737..1258319) 1 NC_012880.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1258319 leuS 8087653 leuS Dickeya dadantii Ech703 leucyl-tRNA synthetase YP_002986725.1 1255737 R 579405 CDS YP_002986726.1 242238545 8087654 1258627..1259109 1 NC_012880.1 PFAM: protein of unknown function DUF1451; KEGG: spe:Spro_1208 hypothetical protein; hypothetical protein 1259109 8087654 Dd703_1099 Dickeya dadantii Ech703 hypothetical protein YP_002986726.1 1258627 D 579405 CDS YP_002986727.1 242238546 8087655 complement(1259258..1259983) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: set:SEN0631 glutamate/aspartate transport ATP-binding protein GltL; ABC transporter 1259983 8087655 Dd703_1100 Dickeya dadantii Ech703 ABC transporter YP_002986727.1 1259258 R 579405 CDS YP_002986728.1 242238547 8087656 complement(1259983..1260657) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1312 glutamate/aspartate transporter permease protein; polar amino acid ABC transporter permease 1260657 8087656 Dd703_1101 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002986728.1 1259983 R 579405 CDS YP_002986729.1 242238548 8087657 complement(1260660..1261400) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1313 glutamate/aspartate transporter permease protein; polar amino acid ABC transporter permease 1261400 8087657 Dd703_1102 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002986729.1 1260660 R 579405 CDS YP_002986730.1 242238549 8087658 complement(1261564..1262460) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: spe:Spro_1214 glutamate and aspartate transporter subunit; family 3 extracellular solute-binding protein 1262460 8087658 Dd703_1103 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002986730.1 1261564 R 579405 CDS YP_002986731.1 242238550 8087659 complement(1262842..1264377) 1 NC_012880.1 transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1264377 lnt 8087659 lnt Dickeya dadantii Ech703 apolipoprotein N-acyltransferase YP_002986731.1 1262842 R 579405 CDS YP_002986732.1 242238551 8087660 complement(1264385..1265254) 1 NC_012880.1 PFAM: transporter-associated region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: eca:ECA1316 magnesium and cobalt efflux protein corc; transporter-associated protein 1265254 8087660 Dd703_1105 Dickeya dadantii Ech703 transporter-associated protein YP_002986732.1 1264385 R 579405 CDS YP_002986733.1 242238552 8087661 complement(1265373..1265858) 1 NC_012880.1 PFAM: protein of unknown function UPF0054; KEGG: eca:ECA1317 metalloprotease; metalloprotease 1265858 8087661 Dd703_1106 Dickeya dadantii Ech703 metalloprotease YP_002986733.1 1265373 R 579405 CDS YP_002986734.1 242238553 8087662 complement(1265855..1266910) 1 NC_012880.1 PFAM: PhoH family protein; KEGG: spe:Spro_1218 PhoH family protein; PhoH family protein 1266910 8087662 Dd703_1107 Dickeya dadantii Ech703 PhoH family protein YP_002986734.1 1265855 R 579405 CDS YP_002986735.1 242238554 8087663 complement(1267131..1268561) 1 NC_012880.1 KEGG: eca:ECA1319 hypothetical protein; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase MiaB 1268561 8087663 Dd703_1108 Dickeya dadantii Ech703 tRNA-i(6)A37 thiotransferase MiaB YP_002986735.1 1267131 R 579405 CDS YP_002986736.1 242238555 8087664 1268760..1269926 1 NC_012880.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1269926 ubiF 8087664 ubiF Dickeya dadantii Ech703 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_002986736.1 1268760 D 579405 CDS YP_002986737.1 242238556 8087665 1270053..1270382 1 NC_012880.1 PFAM: small multidrug resistance protein; KEGG: ses:SARI_01331 hypothetical protein; small multidrug resistance protein 1270382 8087665 Dd703_1110 Dickeya dadantii Ech703 small multidrug resistance protein YP_002986737.1 1270053 D 579405 CDS YP_002986738.1 242238557 8087672 complement(1271375..1273039) 1 NC_012880.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 1273039 asnB 8087672 asnB Dickeya dadantii Ech703 asparagine synthetase B YP_002986738.1 1271375 R 579405 CDS YP_002986739.1 242238558 8087673 complement(1273332..1274555) 1 NC_012880.1 PFAM: ROK family protein; KEGG: eca:ECA1324 N-acetylglucosamine repressor; ROK family protein 1274555 8087673 Dd703_1112 Dickeya dadantii Ech703 ROK family protein YP_002986739.1 1273332 R 579405 CDS YP_002986740.1 242238559 8087674 complement(1274563..1275717) 1 NC_012880.1 KEGG: eca:ECA1325 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 1275717 8087674 Dd703_1113 Dickeya dadantii Ech703 N-acetylglucosamine-6-phosphate deacetylase YP_002986740.1 1274563 R 579405 CDS YP_002986741.1 242238560 8087675 complement(1275748..1276548) 1 NC_012880.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 1276548 nagB 8087675 nagB Dickeya dadantii Ech703 glucosamine-6-phosphate deaminase YP_002986741.1 1275748 R 579405 CDS YP_002986742.1 242238561 8087676 1276841..1278307 1 NC_012880.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA1327 PTS system, N-acetylglucosamine-specific IIABC component; PTS system N-acetylglucosamine-specific transporter subunit IIBC 1278307 8087676 Dd703_1115 Dickeya dadantii Ech703 PTS system N-acetylglucosamine-specific transporter subunit IIBC YP_002986742.1 1276841 D 579405 CDS YP_002986743.1 242238562 8087677 1278469..1280127 1 NC_012880.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1280127 8087677 Dd703_1116 Dickeya dadantii Ech703 glutaminyl-tRNA synthetase YP_002986743.1 1278469 D 579405 CDS YP_002986744.1 242238563 8087678 complement(1280291..1280737) 1 NC_012880.1 PFAM: ferric-uptake regulator; KEGG: spe:Spro_1236 ferric uptake regulator; Fur family ferric uptake regulator 1280737 8087678 Dd703_1117 Dickeya dadantii Ech703 Fur family ferric uptake regulator YP_002986744.1 1280291 R 579405 CDS YP_002986745.1 242238564 8087679 complement(1281060..1281587) 1 NC_012880.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: eca:ECA1330 flavodoxin FldA; flavodoxin 1281587 8087679 Dd703_1118 Dickeya dadantii Ech703 flavodoxin YP_002986745.1 1281060 R 579405 CDS YP_002986746.1 242238565 8087680 1281992..1283677 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA1332 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1283677 8087680 Dd703_1119 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002986746.1 1281992 D 579405 CDS YP_002986747.1 242238566 8087681 complement(1283718..1283999) 1 NC_012880.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: eca:ECA1333 LexA regulated protein; LexA regulated protein 1283999 8087681 Dd703_1120 Dickeya dadantii Ech703 LexA regulated protein YP_002986747.1 1283718 R 579405 CDS YP_002986748.1 242238567 8087682 complement(1284192..1284974) 1 NC_012880.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: eca:ECA1334 hypothetical protein; hypothetical protein 1284974 8087682 Dd703_1121 Dickeya dadantii Ech703 hypothetical protein YP_002986748.1 1284192 R 579405 CDS YP_002986749.1 242238568 8087683 1285245..1285775 1 NC_012880.1 PFAM: SeqA family protein; KEGG: eca:ECA1335 replication initiation regulator SeqA; SeqA family protein 1285775 8087683 Dd703_1122 Dickeya dadantii Ech703 SeqA family protein YP_002986749.1 1285245 D 579405 CDS YP_002986750.1 242238569 8087684 1285800..1287443 1 NC_012880.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1287443 8087684 Dd703_1123 Dickeya dadantii Ech703 phosphoglucomutase YP_002986750.1 1285800 D 579405 CDS YP_002986751.1 242238570 8087685 complement(1287530..1287958) 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA1337 hypothetical protein; hypothetical protein 1287958 8087685 Dd703_1124 Dickeya dadantii Ech703 hypothetical protein YP_002986751.1 1287530 R 579405 CDS YP_002986752.1 242238571 8087686 1288282..1289118 1 NC_012880.1 KEGG: pau:PA14_64430 hypothetical protein; hypothetical protein 1289118 8087686 Dd703_1125 Dickeya dadantii Ech703 hypothetical protein YP_002986752.1 1288282 D 579405 CDS YP_002986753.1 242238572 8087687 complement(1289141..1289821) 1 NC_012880.1 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 1289821 8087687 Dd703_1126 Dickeya dadantii Ech703 DNA-binding transcriptional activator KdpE YP_002986753.1 1289141 R 579405 CDS YP_002986754.1 242238573 8087688 complement(1289826..1292558) 1 NC_012880.1 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 1292558 8087688 Dd703_1127 Dickeya dadantii Ech703 sensor protein KdpD YP_002986754.1 1289826 R 579405 CDS YP_002986755.1 242238574 8087689 complement(1292573..1293148) 1 NC_012880.1 KEGG: eca:ECA1340 potassium-transporting ATPase C chain; TIGRFAM: potassium ABC transporter ATPase; PFAM: K transporting ATPase KdpC subunit; potassium ABC transporter ATPase 1293148 8087689 Dd703_1128 Dickeya dadantii Ech703 potassium ABC transporter ATPase YP_002986755.1 1292573 R 579405 CDS YP_002986756.1 242238575 8087690 complement(1293164..1295230) 1 NC_012880.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase B 1295230 8087690 Dd703_1129 Dickeya dadantii Ech703 potassium-transporting ATPase B YP_002986756.1 1293164 R 579405 CDS YP_002986757.1 242238576 8087691 complement(1295245..1296930) 1 NC_012880.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 1296930 8087691 Dd703_1130 Dickeya dadantii Ech703 potassium-transporting ATPase A YP_002986757.1 1295245 R 579405 CDS YP_002986758.1 242238577 8087692 complement(1296930..1297043) 1 NC_012880.1 TIGRFAM: K+-transporting ATPase, F subunit; K+-transporting ATPase subunit F 1297043 8087692 Dd703_1131 Dickeya dadantii Ech703 K+-transporting ATPase subunit F YP_002986758.1 1296930 R 579405 CDS YP_002986759.1 242238578 8087693 1297477..1297683 1 NC_012880.1 KEGG: eca:ECA1344 hypothetical protein; hypothetical protein 1297683 8087693 Dd703_1132 Dickeya dadantii Ech703 hypothetical protein YP_002986759.1 1297477 D 579405 CDS YP_002986760.1 242238579 8087694 1298005..1298958 1 NC_012880.1 PFAM: protein of unknown function DUF1722; protein of unknown function DUF523; KEGG: eca:ECA1348 hypothetical protein; hypothetical protein 1298958 8087694 Dd703_1133 Dickeya dadantii Ech703 hypothetical protein YP_002986760.1 1298005 D 579405 CDS YP_002986761.1 242238580 8087695 1298983..1300416 1 NC_012880.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase 1300416 8087695 Dd703_1134 Dickeya dadantii Ech703 deoxyribodipyrimidine photolyase YP_002986761.1 1298983 D 579405 CDS YP_002986762.1 242238581 8087696 1300456..1301199 1 NC_012880.1 PFAM: protein of unknown function DUF34; KEGG: eca:ECA1350 hydrolase-oxidase; hypothetical protein 1301199 8087696 Dd703_1135 Dickeya dadantii Ech703 hypothetical protein YP_002986762.1 1300456 D 579405 CDS YP_002986763.1 242238582 8087697 1301216..1301872 1 NC_012880.1 PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: eca:ECA1351 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 1301872 8087697 Dd703_1136 Dickeya dadantii Ech703 allophanate hydrolase subunit 1 YP_002986763.1 1301216 D 579405 CDS YP_002986764.1 242238583 8087698 1301866..1302795 1 NC_012880.1 KEGG: eca:ECA1352 allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; SMART: allophanate hydrolase subunit 2; urea amidolyase-like protein 1302795 8087698 Dd703_1137 Dickeya dadantii Ech703 urea amidolyase-like protein YP_002986764.1 1301866 D 579405 CDS YP_002986765.1 242238584 8087699 1302785..1303522 1 NC_012880.1 PFAM: LamB/YcsF family protein; KEGG: yen:YE2953 hypothetical protein; LamB/YcsF family protein 1303522 8087699 Dd703_1138 Dickeya dadantii Ech703 LamB/YcsF family protein YP_002986765.1 1302785 D 579405 CDS YP_002986766.1 242238585 8087700 complement(1303631..1304917) 1 NC_012880.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1304917 gltA 8087700 gltA Dickeya dadantii Ech703 type II citrate synthase YP_002986766.1 1303631 R 579405 CDS YP_002986767.1 242238586 8087701 1305563..1305952 1 NC_012880.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: eca:ECA1357 succinate dehydrogenase cytochrome b556 large membrane subunit; succinate dehydrogenase, cytochrome b556 subunit 1305952 8087701 Dd703_1140 Dickeya dadantii Ech703 succinate dehydrogenase, cytochrome b556 subunit YP_002986767.1 1305563 D 579405 CDS YP_002986768.1 242238587 8087702 1305946..1306293 1 NC_012880.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: eca:ECA1358 succinate dehydrogenase cytochrome b556 small membrane subunit; succinate dehydrogenase cytochrome b556 small membrane subunit 1306293 sdhD 8087702 sdhD Dickeya dadantii Ech703 succinate dehydrogenase cytochrome b556 small membrane subunit YP_002986768.1 1305946 D 579405 CDS YP_002986769.1 242238588 8087703 1306290..1308059 1 NC_012880.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1308059 sdhA 8087703 sdhA Dickeya dadantii Ech703 succinate dehydrogenase flavoprotein subunit YP_002986769.1 1306290 D 579405 CDS YP_002986770.1 242238589 8087704 1308078..1308794 1 NC_012880.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: yen:YE2945 succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein 1308794 8087704 Dd703_1143 Dickeya dadantii Ech703 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_002986770.1 1308078 D 579405 CDS YP_002986771.1 242238590 8087705 1309023..1311830 1 NC_012880.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1311830 sucA 8087705 sucA Dickeya dadantii Ech703 2-oxoglutarate dehydrogenase E1 component YP_002986771.1 1309023 D 579405 CDS YP_002986772.1 242238591 8087706 1311847..1313067 1 NC_012880.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: eca:ECA1362 dihydrolipoamide acetyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1313067 8087706 Dd703_1145 Dickeya dadantii Ech703 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_002986772.1 1311847 D 579405 CDS YP_002986773.1 242238592 8087707 1313200..1314366 1 NC_012880.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1314366 sucC 8087707 sucC Dickeya dadantii Ech703 succinyl-CoA synthetase subunit beta YP_002986773.1 1313200 D 579405 CDS YP_002986774.1 242238593 8087708 1314366..1315238 1 NC_012880.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1315238 8087708 Dd703_1147 Dickeya dadantii Ech703 succinyl-CoA synthetase subunit alpha YP_002986774.1 1314366 D 579405 CDS YP_002986775.1 242238594 8087709 1315941..1317509 1 NC_012880.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: eca:ECA1365 cytochrome d ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 1317509 8087709 Dd703_1148 Dickeya dadantii Ech703 cytochrome bd ubiquinol oxidase subunit I YP_002986775.1 1315941 D 579405 CDS YP_002986776.1 242238595 8087710 1317522..1318661 1 NC_012880.1 TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: eca:ECA1366 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1318661 8087710 Dd703_1149 Dickeya dadantii Ech703 cytochrome d ubiquinol oxidase subunit II YP_002986776.1 1317522 D 579405 CDS YP_002986777.1 242238596 8087711 1318678..1318794 1 NC_012880.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: eca:ECA1367 hypothetical protein; cyd operon protein YbgT 1318794 8087711 Dd703_1150 Dickeya dadantii Ech703 cyd operon protein YbgT YP_002986777.1 1318678 D 579405 CDS YP_002986778.1 242238597 8087712 1318791..1319084 1 NC_012880.1 TIGRFAM: cyd operon protein YbgE; KEGG: eca:ECA1368 hypothetical protein; hypothetical protein 1319084 8087712 Dd703_1151 Dickeya dadantii Ech703 hypothetical protein YP_002986778.1 1318791 D 579405 CDS YP_002986779.1 242238598 8087713 1319219..1319623 1 NC_012880.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC 1319623 8087713 Dd703_1152 Dickeya dadantii Ech703 acyl-CoA thioester hydrolase YbgC YP_002986779.1 1319219 D 579405 CDS YP_002986780.1 242238599 8087714 1319620..1320306 1 NC_012880.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 1320306 8087714 Dd703_1153 Dickeya dadantii Ech703 colicin uptake protein TolQ YP_002986780.1 1319620 D 579405 CDS YP_002986781.1 242238600 8087715 1320319..1320744 1 NC_012880.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 1320744 8087715 Dd703_1154 Dickeya dadantii Ech703 colicin uptake protein TolR YP_002986781.1 1320319 D 579405 CDS YP_002986782.1 242238601 8087716 1320809..1321978 1 NC_012880.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 1321978 tolA 8087716 tolA Dickeya dadantii Ech703 cell envelope integrity inner membrane protein TolA YP_002986782.1 1320809 D 579405 CDS YP_002986783.1 242238602 8087717 1322108..1323394 1 NC_012880.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1323394 tolB 8087717 tolB Dickeya dadantii Ech703 translocation protein TolB YP_002986783.1 1322108 D 579405 CDS YP_002986784.1 242238603 8087718 1323433..1323939 1 NC_012880.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: yen:YE2931 peptidoglycan-associated outer membrane lipoprotein; peptidoglycan-associated outer membrane lipoprotein 1323939 8087718 Dd703_1157 Dickeya dadantii Ech703 peptidoglycan-associated outer membrane lipoprotein YP_002986784.1 1323433 D 579405 CDS YP_002986785.1 242238604 8087719 1323949..1324758 1 NC_012880.1 TIGRFAM: tol-pal system protein YbgF; KEGG: yen:YE2930 hypothetical protein; tol-pal system protein YbgF 1324758 8087719 Dd703_1158 Dickeya dadantii Ech703 tol-pal system protein YbgF YP_002986785.1 1323949 D 579405 CDS YP_002986786.1 242238605 8087721 1325403..1326119 1 NC_012880.1 PFAM: protein of unknown function DUF554; KEGG: eca:ECA1376 hypothetical protein; hypothetical protein 1326119 8087721 Dd703_1160 Dickeya dadantii Ech703 hypothetical protein YP_002986786.1 1325403 D 579405 CDS YP_002986787.1 242238606 8087722 1326339..1327382 1 NC_012880.1 TIGRFAM: quinolinate synthetase complex, subunit alpha; PFAM: Quinolinate synthetase A; KEGG: eca:ECA1378 quinolinate synthetase; quinolinate synthetase complex subunit alpha 1327382 8087722 Dd703_1161 Dickeya dadantii Ech703 quinolinate synthetase complex subunit alpha YP_002986787.1 1326339 D 579405 CDS YP_002986788.1 242238607 8087723 1327476..1328201 1 NC_012880.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: spe:Spro_1283 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1328201 8087723 Dd703_1162 Dickeya dadantii Ech703 nicotinamide mononucleotide transporter PnuC YP_002986788.1 1327476 D 579405 CDS YP_002986789.1 242238608 8087724 1328387..1329439 1 NC_012880.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1329439 8087724 Dd703_1163 Dickeya dadantii Ech703 phospho-2-dehydro-3-deoxyheptonate aldolase YP_002986789.1 1328387 D 579405 CDS YP_002986790.1 242238609 8087725 complement(1329502..1330254) 1 NC_012880.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1330254 gpmA 8087725 gpmA Dickeya dadantii Ech703 phosphoglyceromutase YP_002986790.1 1329502 R 579405 CDS YP_002986791.1 242238610 8087726 complement(1330403..1333540) 1 NC_012880.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: eca:ECA1383 cation efflux system protein; CzcA family heavy metal efflux pump 1333540 8087726 Dd703_1165 Dickeya dadantii Ech703 CzcA family heavy metal efflux pump YP_002986791.1 1330403 R 579405 CDS YP_002986792.1 242238611 8087727 complement(1333537..1335030) 1 NC_012880.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: eca:ECA1384 copper efflux system protein; RND family efflux transporter MFP subunit 1335030 8087727 Dd703_1166 Dickeya dadantii Ech703 RND family efflux transporter MFP subunit YP_002986792.1 1333537 R 579405 CDS YP_002986793.1 242238612 8087728 complement(1335027..1336286) 1 NC_012880.1 PFAM: outer membrane efflux protein; KEGG: eca:ECA1385 hypothetical protein; outer membrane efflux protein 1336286 8087728 Dd703_1167 Dickeya dadantii Ech703 outer membrane efflux protein YP_002986793.1 1335027 R 579405 CDS YP_002986794.1 242238613 8087729 complement(1336298..1336672) 1 NC_012880.1 KEGG: eca:ECA1386 hypothetical protein; hypothetical protein 1336672 8087729 Dd703_1168 Dickeya dadantii Ech703 hypothetical protein YP_002986794.1 1336298 R 579405 CDS YP_002986795.1 242238614 8087730 complement(1336755..1337201) 1 NC_012880.1 KEGG: eca:ECA1387 hypothetical protein; hypothetical protein 1337201 8087730 Dd703_1169 Dickeya dadantii Ech703 hypothetical protein YP_002986795.1 1336755 R 579405 CDS YP_002986796.1 242238615 8087731 complement(1337316..1338368) 1 NC_012880.1 catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase 1338368 galM 8087731 galM Dickeya dadantii Ech703 aldose 1-epimerase YP_002986796.1 1337316 R 579405 CDS YP_002986797.1 242238616 8087732 complement(1338358..1339509) 1 NC_012880.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: yps:YPTB1169 galactokinase; galactokinase 1339509 8087732 Dd703_1171 Dickeya dadantii Ech703 galactokinase YP_002986797.1 1338358 R 579405 CDS YP_002986798.1 242238617 8087733 complement(1339506..1340558) 1 NC_012880.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 1340558 8087733 Dd703_1172 Dickeya dadantii Ech703 galactose-1-phosphate uridylyltransferase YP_002986798.1 1339506 R 579405 CDS YP_002986799.1 242238618 8087734 complement(1340610..1341626) 1 NC_012880.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: eca:ECA1389 UDP-galactose-4-epimerase; UDP-galactose-4-epimerase 1341626 8087734 Dd703_1173 Dickeya dadantii Ech703 UDP-galactose-4-epimerase YP_002986799.1 1340610 R 579405 CDS YP_002986800.1 242238619 8087735 complement(1341855..1343321) 1 NC_012880.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF 1343321 8087735 Dd703_1174 Dickeya dadantii Ech703 molybdenum transport ATP-binding protein ModF YP_002986800.1 1341855 R 579405 CDS YP_002986801.1 242238620 8087736 complement(1343398..1344189) 1 NC_012880.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE 1344189 8087736 Dd703_1175 Dickeya dadantii Ech703 DNA-binding transcriptional regulator ModE YP_002986801.1 1343398 R 579405 CDS YP_002986802.1 242238621 8087737 1344603..1344761 1 NC_012880.1 KEGG: kpn:KPN_00776 hypothetical protein; hypothetical protein 1344761 8087737 Dd703_1176 Dickeya dadantii Ech703 hypothetical protein YP_002986802.1 1344603 D 579405 CDS YP_002986803.1 242238622 8087738 1345019..1345792 1 NC_012880.1 with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 1345792 modA 8087738 modA Dickeya dadantii Ech703 molybdate transporter periplasmic protein YP_002986803.1 1345019 D 579405 CDS YP_002986804.1 242238623 8087739 1345792..1346481 1 NC_012880.1 TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1394 molybdate ABC transporter permease; molybdate ABC transporter inner membrane subunit 1346481 8087739 Dd703_1178 Dickeya dadantii Ech703 molybdate ABC transporter inner membrane subunit YP_002986804.1 1345792 D 579405 CDS YP_002986805.1 242238624 8087740 1346481..1347539 1 NC_012880.1 Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 1347539 modC 8087740 modC Dickeya dadantii Ech703 molybdate transporter ATP-binding protein YP_002986805.1 1346481 D 579405 CDS YP_002986806.1 242238625 8087741 complement(1347653..1348474) 1 NC_012880.1 YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase 1348474 8087741 Dd703_1180 Dickeya dadantii Ech703 phosphotransferase YP_002986806.1 1347653 R 579405 CDS YP_002986807.1 242238626 8087742 1348661..1349650 1 NC_012880.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 1349650 8087742 Dd703_1181 Dickeya dadantii Ech703 6-phosphogluconolactonase YP_002986807.1 1348661 D 579405 CDS YP_002986808.1 242238627 8087743 1349987..1351696 1 NC_012880.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: esa:ESA_01898 hypothetical protein; ABC transporter 1351696 8087743 Dd703_1182 Dickeya dadantii Ech703 ABC transporter YP_002986808.1 1349987 D 579405 CDS YP_002986809.1 242238628 8087744 complement(1351687..1352526) 1 NC_012880.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: pol:Bpro_4850 rhodanese-like; rhodanese 1352526 8087744 Dd703_1183 Dickeya dadantii Ech703 rhodanese YP_002986809.1 1351687 R 579405 CDS YP_002986810.1 242238629 8087745 complement(1352520..1353524) 1 NC_012880.1 PFAM: ornithine cyclodeaminase/mu-crystallin; shikimate/quinate 5-dehydrogenase; KEGG: esa:ESA_01897 hypothetical protein; ornithine cyclodeaminase/mu-crystallin 1353524 8087745 Dd703_1184 Dickeya dadantii Ech703 ornithine cyclodeaminase/mu-crystallin YP_002986810.1 1352520 R 579405 CDS YP_002986811.1 242238630 8087746 complement(1353527..1354525) 1 NC_012880.1 TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: ade:Adeh_1432 D-cysteine desulfhydrase; pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 1354525 8087746 Dd703_1185 Dickeya dadantii Ech703 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family YP_002986811.1 1353527 R 579405 CDS YP_002986812.1 242238631 8087747 complement(1354522..1355922) 1 NC_012880.1 PFAM: peptidase M20; KEGG: esa:ESA_01896 hypothetical protein; peptidase M20 1355922 8087747 Dd703_1186 Dickeya dadantii Ech703 peptidase M20 YP_002986812.1 1354522 R 579405 CDS YP_002986813.1 242238632 8087748 complement(1355919..1356833) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: esa:ESA_01895 hypothetical protein; binding-protein-dependent transporters inner membrane component 1356833 8087748 Dd703_1187 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986813.1 1355919 R 579405 CDS YP_002986814.1 242238633 8087749 complement(1356835..1357689) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: esa:ESA_01894 hypothetical protein; binding-protein-dependent transporters inner membrane component 1357689 8087749 Dd703_1188 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986814.1 1356835 R 579405 CDS YP_002986815.1 242238634 8087750 complement(1357686..1359179) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: esa:ESA_01893 hypothetical protein; family 5 extracellular solute-binding protein 1359179 8087750 Dd703_1189 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002986815.1 1357686 R 579405 CDS YP_002986816.1 242238635 8087751 1359541..1360200 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: esa:ESA_01892 hypothetical protein; GntR family transcriptional regulator 1360200 8087751 Dd703_1190 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986816.1 1359541 D 579405 CDS YP_002986817.1 242238636 8087752 1360494..1360676 1 NC_012880.1 hypothetical protein 1360676 8087752 Dd703_1191 Dickeya dadantii Ech703 hypothetical protein YP_002986817.1 1360494 D 579405 CDS YP_002986818.1 242238637 8087753 complement(1360916..1362166) 1 NC_012880.1 KEGG: eca:ECA1404 hypothetical protein; hypothetical protein 1362166 8087753 Dd703_1192 Dickeya dadantii Ech703 hypothetical protein YP_002986818.1 1360916 R 579405 CDS YP_002986819.1 242238638 8087754 complement(1362276..1363349) 1 NC_012880.1 KEGG: eca:ECA1405 hypothetical protein; hypothetical protein 1363349 8087754 Dd703_1193 Dickeya dadantii Ech703 hypothetical protein YP_002986819.1 1362276 R 579405 CDS YP_002986820.1 242238639 8087755 complement(1363663..1364094) 1 NC_012880.1 PFAM: VirK family protein; KEGG: xac:XAC0435 VirK protein; VirK family protein 1364094 8087755 Dd703_1194 Dickeya dadantii Ech703 VirK family protein YP_002986820.1 1363663 R 579405 CDS YP_002986821.1 242238640 8087756 complement(1364365..1366395) 1 NC_012880.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1366395 metG 8087756 metG Dickeya dadantii Ech703 methionyl-tRNA synthetase YP_002986821.1 1364365 R 579405 CDS YP_002986822.1 242238641 8087757 1366609..1367718 1 NC_012880.1 KEGG: eca:ECA1410 ATPase; ATPase 1367718 8087757 Dd703_1196 Dickeya dadantii Ech703 ATPase YP_002986822.1 1366609 D 579405 CDS YP_002986823.1 242238642 8087758 1367944..1368585 1 NC_012880.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1368585 8087758 Dd703_1197 Dickeya dadantii Ech703 uridine kinase YP_002986823.1 1367944 D 579405 CDS YP_002986824.1 242238643 8087759 1368666..1369250 1 NC_012880.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1369250 dcd 8087759 dcd Dickeya dadantii Ech703 deoxycytidine triphosphate deaminase YP_002986824.1 1368666 D 579405 CDS YP_002986825.1 242238644 8087760 1369284..1371083 1 NC_012880.1 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; assembly protein 1371083 8087760 Dd703_1199 Dickeya dadantii Ech703 assembly protein YP_002986825.1 1369284 D 579405 CDS YP_002986826.1 242238645 8087761 complement(1371224..1372813) 1 NC_012880.1 PFAM: integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: eca:ECA1415 hypothetical protein; integral membrane protein TerC 1372813 8087761 Dd703_1200 Dickeya dadantii Ech703 integral membrane protein TerC YP_002986826.1 1371224 R 579405 CDS YP_002986827.1 242238646 8087762 1373023..1374030 1 NC_012880.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: aha:AHA_2881 nucleotide sugar epimerase; NAD-dependent epimerase/dehydratase 1374030 8087762 Dd703_1201 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002986827.1 1373023 D 579405 CDS YP_002986828.1 242238647 8087763 1374138..1375307 1 NC_012880.1 KEGG: ent:Ent638_2641 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; nucleotide sugar dehydrogenase 1375307 8087763 Dd703_1202 Dickeya dadantii Ech703 nucleotide sugar dehydrogenase YP_002986828.1 1374138 D 579405 CDS YP_002986829.1 242238648 8087764 1375388..1376284 1 NC_012880.1 PFAM: nucleotidyl transferase; KEGG: eca:ECA1443 UTP--glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase 1376284 8087764 Dd703_1203 Dickeya dadantii Ech703 UTP--glucose-1-phosphate uridylyltransferase YP_002986829.1 1375388 D 579405 CDS YP_002986830.1 242238649 8087765 1376541..1377947 1 NC_012880.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1377947 8087765 Dd703_1204 Dickeya dadantii Ech703 6-phosphogluconate dehydrogenase YP_002986830.1 1376541 D 579405 CDS YP_002986831.1 242238650 8087766 1378721..1379836 1 NC_012880.1 KEGG: eca:ECA1453 signaling membrane protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1379836 8087766 Dd703_1205 Dickeya dadantii Ech703 diguanylate cyclase YP_002986831.1 1378721 D 579405 CDS YP_002986832.1 242238651 8087767 complement(1379799..1380728) 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA1505 hypothetical protein; GntR family transcriptional regulator 1380728 8087767 Dd703_1206 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986832.1 1379799 R 579405 CDS YP_002986833.1 242238652 8087768 1380932..1381387 1 NC_012880.1 hypothetical protein 1381387 8087768 Dd703_1207 Dickeya dadantii Ech703 hypothetical protein YP_002986833.1 1380932 D 579405 CDS YP_002986834.1 242238653 8087769 complement(1381397..1382392) 1 NC_012880.1 PFAM: protein of unknown function DUF535; KEGG: eta:ETA_30810 virulence protein; hypothetical protein 1382392 8087769 Dd703_1208 Dickeya dadantii Ech703 hypothetical protein YP_002986834.1 1381397 R 579405 CDS YP_002986835.1 242238654 8087770 1383388..1384419 1 NC_012880.1 PFAM: Haemin-degrading family protein; KEGG: yps:YPTB0339 hemin degradation/transporter HmuS; hemic-degrading family protein 1384419 8087770 Dd703_1209 Dickeya dadantii Ech703 hemic-degrading family protein YP_002986835.1 1383388 D 579405 CDS YP_002986836.1 242238655 8087771 1384416..1385228 1 NC_012880.1 PFAM: periplasmic binding protein; KEGG: sgl:SG1538 hemin ABC transporter periplasmic component; periplasmic binding protein 1385228 8087771 Dd703_1210 Dickeya dadantii Ech703 periplasmic binding protein YP_002986836.1 1384416 D 579405 CDS YP_002986837.1 242238656 8087772 1385225..1386214 1 NC_012880.1 PFAM: transporter permease; KEGG: sgl:SG1539 hemin ABC transporter permease; transporter permease 1386214 8087772 Dd703_1211 Dickeya dadantii Ech703 transporter permease YP_002986837.1 1385225 D 579405 CDS YP_002986838.1 242238657 8087773 1386207..1386998 1 NC_012880.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 1386998 hmuV 8087773 hmuV Dickeya dadantii Ech703 hemin importer ATP-binding subunit YP_002986838.1 1386207 D 579405 CDS YP_002986839.1 242238658 8087774 1387208..1389607 1 NC_012880.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: kpe:KPK_1035 TonB-dependent receptor; TonB-dependent receptor 1389607 8087774 Dd703_1213 Dickeya dadantii Ech703 TonB-dependent receptor YP_002986839.1 1387208 D 579405 CDS YP_002986840.1 242238659 8087775 complement(1389712..1390197) 1 NC_012880.1 PFAM: ferritin; KEGG: spe:Spro_2688 ferritin Dps family protein; ferritin 1390197 8087775 Dd703_1214 Dickeya dadantii Ech703 ferritin YP_002986840.1 1389712 R 579405 CDS YP_002986841.1 242238660 8087776 complement(1390568..1392025) 1 NC_012880.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1392025 8087776 Dd703_1215 Dickeya dadantii Ech703 AMP nucleosidase YP_002986841.1 1390568 R 579405 CDS YP_002986842.1 242238661 8087777 1392350..1393510 1 NC_012880.1 KEGG: eta:ETA_22260 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1393510 8087777 Dd703_1216 Dickeya dadantii Ech703 amidohydrolase YP_002986842.1 1392350 D 579405 CDS YP_002986843.1 242238662 8087778 1393760..1394692 1 NC_012880.1 hypothetical protein 1394692 8087778 Dd703_1217 Dickeya dadantii Ech703 hypothetical protein YP_002986843.1 1393760 D 579405 CDS YP_002986844.1 242238663 8087779 complement(1394848..1395708) 1 NC_012880.1 PFAM: aminotransferase class IV; KEGG: eca:ECA3117 D-alanine aminotransferase; class IV aminotransferase 1395708 8087779 Dd703_1218 Dickeya dadantii Ech703 class IV aminotransferase YP_002986844.1 1394848 R 579405 CDS YP_002986845.1 242238664 8087780 complement(1395708..1396724) 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA3116 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 1396724 8087780 Dd703_1219 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002986845.1 1395708 R 579405 CDS YP_002986846.1 242238665 8087781 complement(1396735..1397727) 1 NC_012880.1 PFAM: protein of unknown function DUF1611; KEGG: mes:Meso_0034 protein of unknown function DUF1611; hypothetical protein 1397727 8087781 Dd703_1220 Dickeya dadantii Ech703 hypothetical protein YP_002986846.1 1396735 R 579405 CDS YP_002986847.1 242238666 8087782 1398429..1399988 1 NC_012880.1 KEGG: eca:ECA3148 regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1399988 8087782 Dd703_1221 Dickeya dadantii Ech703 diguanylate cyclase YP_002986847.1 1398429 D 579405 CDS YP_002986848.1 242238667 8087783 complement(1400014..1400748) 1 NC_012880.1 PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: pat:Patl_2326 IclR family transcriptional regulator; IclR family transcriptional regulator 1400748 8087783 Dd703_1222 Dickeya dadantii Ech703 IclR family transcriptional regulator YP_002986848.1 1400014 R 579405 CDS YP_002986849.1 242238668 8087784 1400984..1402372 1 NC_012880.1 PFAM: aldehyde dehydrogenase; KEGG: ara:Arad_7566 aldehyde dehydrogenase protein; aldehyde dehydrogenase 1402372 8087784 Dd703_1223 Dickeya dadantii Ech703 aldehyde dehydrogenase YP_002986849.1 1400984 D 579405 CDS YP_002986850.1 242238669 8087785 complement(1402488..1403567) 1 NC_012880.1 KEGG: aci:ACIAD2279 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1403567 8087785 Dd703_1224 Dickeya dadantii Ech703 diguanylate cyclase YP_002986850.1 1402488 R 579405 CDS YP_002986851.1 242238670 8087786 complement(1403771..1406728) 1 NC_012880.1 KEGG: pha:PSHAa1169 GGDEF protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Two component regulator propeller; Two component regulator three Y domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase with beta propeller sensor 1406728 8087786 Dd703_1225 Dickeya dadantii Ech703 diguanylate cyclase with beta propeller sensor YP_002986851.1 1403771 R 579405 CDS YP_002986852.1 242238671 8087787 1407170..1407706 1 NC_012880.1 KEGG: apj:APJL_1697 gluconate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 1407706 8087787 Dd703_1226 Dickeya dadantii Ech703 thermoresistant glucokinase family carbohydrate kinase YP_002986852.1 1407170 D 579405 CDS YP_002986853.1 242238672 8087788 1407703..1409508 1 NC_012880.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 1409508 8087788 Dd703_1227 Dickeya dadantii Ech703 phosphogluconate dehydratase YP_002986853.1 1407703 D 579405 CDS YP_002986854.1 242238673 8087789 complement(1409670..1411142) 1 NC_012880.1 KEGG: eca:ECA2840 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1411142 8087789 Dd703_1228 Dickeya dadantii Ech703 diguanylate cyclase YP_002986854.1 1409670 R 579405 CDS YP_002986855.1 242238674 8087790 1411571..1412785 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppw:PputW619_2449 major facilitator transporter; major facilitator superfamily protein 1412785 8087790 Dd703_1229 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986855.1 1411571 D 579405 CDS YP_002986856.1 242238675 8087791 1412983..1414257 1 NC_012880.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: stm:STM1795 glutamic dehyrogenase-like protein; Glu/Leu/Phe/Val dehydrogenase 1414257 8087791 Dd703_1230 Dickeya dadantii Ech703 Glu/Leu/Phe/Val dehydrogenase YP_002986856.1 1412983 D 579405 CDS YP_002986857.1 242238676 8087792 complement(1414368..1415264) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_0204 LysR family transcriptional regulator; LysR family transcriptional regulator 1415264 8087792 Dd703_1231 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986857.1 1414368 R 579405 CDS YP_002986858.1 242238677 8087793 complement(1415817..1416524) 1 NC_012880.1 PFAM: protein of unknown function DUF162; KEGG: eca:ECA1918 hypothetical protein; hypothetical protein 1416524 8087793 Dd703_1232 Dickeya dadantii Ech703 hypothetical protein YP_002986858.1 1415817 R 579405 CDS YP_002986859.1 242238678 8087794 complement(1416521..1417942) 1 NC_012880.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: cko:CKO_04246 hypothetical protein; iron-sulfur cluster binding protein 1417942 8087794 Dd703_1233 Dickeya dadantii Ech703 iron-sulfur cluster binding protein YP_002986859.1 1416521 R 579405 CDS YP_002986860.1 242238679 8087795 complement(1417954..1418673) 1 NC_012880.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: eca:ECA1920 hypothetical protein; hypothetical protein 1418673 8087795 Dd703_1234 Dickeya dadantii Ech703 hypothetical protein YP_002986860.1 1417954 R 579405 CDS YP_002986861.1 242238680 8087796 1418951..1419799 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A1171 AraC family transcriptional regulator; AraC family transcriptional regulator 1419799 8087796 Dd703_1235 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986861.1 1418951 D 579405 CDS YP_002986862.1 242238681 8087797 complement(1419753..1420448) 1 NC_012880.1 PFAM: LrgB family protein; KEGG: ent:Ent638_2745 hypothetical protein; hypothetical protein 1420448 8087797 Dd703_1236 Dickeya dadantii Ech703 hypothetical protein YP_002986862.1 1419753 R 579405 CDS YP_002986863.1 242238682 8087798 complement(1420438..1420854) 1 NC_012880.1 PFAM: LrgA family protein; KEGG: ses:SARI_00720 hypothetical protein; LrgA family protein 1420854 8087798 Dd703_1237 Dickeya dadantii Ech703 LrgA family protein YP_002986863.1 1420438 R 579405 CDS YP_002986864.1 242238683 8087799 1421319..1421693 1 NC_012880.1 PFAM: copper resistance protein CopC; KEGG: esa:ESA_01399 hypothetical protein; copper resistance protein CopC 1421693 8087799 Dd703_1238 Dickeya dadantii Ech703 copper resistance protein CopC YP_002986864.1 1421319 D 579405 CDS YP_002986865.1 242238684 8087800 1421781..1422713 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_2901 malonate utilization transcriptional regulator MdcR; LysR family transcriptional regulator 1422713 8087800 Dd703_1239 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986865.1 1421781 D 579405 CDS YP_002986866.1 242238685 8087801 complement(1422703..1423602) 1 NC_012880.1 TIGRFAM: malonate decarboxylase, subunit epsilon; PFAM: acyl transferase; KEGG: kpn:KPN_01558 acyl carrier protein S-malonyltransferase; malonate decarboxylase subunit epsilon 1423602 8087801 Dd703_1240 Dickeya dadantii Ech703 malonate decarboxylase subunit epsilon YP_002986866.1 1422703 R 579405 CDS YP_002986867.1 242238686 8087802 complement(1423599..1424216) 1 NC_012880.1 Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 1424216 8087802 Dd703_1241 Dickeya dadantii Ech703 phosphoribosyl-dephospho-CoA transferase YP_002986867.1 1423599 R 579405 CDS YP_002986868.1 242238687 8087803 complement(1424219..1425178) 1 NC_012880.1 TIGRFAM: auxin efflux carrier; PFAM: Auxin Efflux Carrier; KEGG: cko:CKO_04764 hypothetical protein; auxin efflux carrier 1425178 8087803 Dd703_1242 Dickeya dadantii Ech703 auxin efflux carrier YP_002986868.1 1424219 R 579405 CDS YP_002986869.1 242238688 8087804 complement(1425573..1426376) 1 NC_012880.1 TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma; KEGG: kpn:KPN_01560 acetyl-CoA carboxylase subunit alpha; malonate decarboxylase subunit gamma 1426376 8087804 Dd703_1243 Dickeya dadantii Ech703 malonate decarboxylase subunit gamma YP_002986869.1 1425573 R 579405 CDS YP_002986870.1 242238689 8087805 complement(1426373..1427206) 1 NC_012880.1 The subunit beta catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1427206 8087805 Dd703_1244 Dickeya dadantii Ech703 malonate decarboxylase subunit beta YP_002986870.1 1426373 R 579405 CDS YP_002986871.1 242238690 8087806 complement(1427199..1427498) 1 NC_012880.1 TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase subunit delta; KEGG: kpe:KPK_2896 malonate decarboxylase, subunit delta; malonate decarboxylase acyl carrier protein 1427498 8087806 Dd703_1245 Dickeya dadantii Ech703 malonate decarboxylase acyl carrier protein YP_002986871.1 1427199 R 579405 CDS YP_002986872.1 242238691 8087807 complement(1427516..1428370) 1 NC_012880.1 KEGG: kpe:KPK_2895 triphosphoribosyl-dephospho-CoA synthase MdcB; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB 1428370 8087807 Dd703_1246 Dickeya dadantii Ech703 triphosphoribosyl-dephospho-CoA synthase MdcB YP_002986872.1 1427516 R 579405 CDS YP_002986873.1 242238692 8087808 complement(1428370..1430025) 1 NC_012880.1 TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: ses:SARI_04157 hypothetical protein; malonate decarboxylase subunit alpha 1430025 8087808 Dd703_1247 Dickeya dadantii Ech703 malonate decarboxylase subunit alpha YP_002986873.1 1428370 R 579405 CDS YP_002986874.1 242238693 8087809 complement(1430442..1431290) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: bid:Bind_0037 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 1431290 8087809 Dd703_1248 Dickeya dadantii Ech703 short chain dehydrogenase YP_002986874.1 1430442 R 579405 CDS YP_002986875.1 242238694 8087810 complement(1431379..1432218) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_0040 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 1432218 8087810 Dd703_1249 Dickeya dadantii Ech703 short chain dehydrogenase YP_002986875.1 1431379 R 579405 CDS YP_002986876.1 242238695 8087811 complement(1432377..1433324) 1 NC_012880.1 PFAM: patatin; KEGG: pol:Bpro_3091 patatin; patatin 1433324 8087811 Dd703_1250 Dickeya dadantii Ech703 patatin YP_002986876.1 1432377 R 579405 CDS YP_002986877.1 242238696 8087812 complement(1433324..1434004) 1 NC_012880.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rme:Rmet_4289 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 1434004 8087812 Dd703_1251 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002986877.1 1433324 R 579405 CDS YP_002986878.1 242238697 8087813 complement(1434019..1435029) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: xac:XAC0536 virulence regulating protein; AraC family transcriptional regulator 1435029 8087813 Dd703_1252 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986878.1 1434019 R 579405 CDS YP_002986879.1 242238698 8087814 1435235..1435471 1 NC_012880.1 PFAM: Post-segregation antitoxin CcdA; KEGG: spe:Spro_1554 post-segregation antitoxin CcdA; Post-segregation antitoxin CcdA 1435471 8087814 Dd703_1253 Dickeya dadantii Ech703 Post-segregation antitoxin CcdA YP_002986879.1 1435235 D 579405 CDS YP_002986880.1 242238699 8087816 complement(1435745..1436278) 1 NC_012880.1 KEGG: bpt:Bpet1373 phosphoserine phosphatase; hypothetical protein 1436278 8087816 Dd703_1255 Dickeya dadantii Ech703 hypothetical protein YP_002986880.1 1435745 R 579405 CDS YP_002986881.1 242238700 8087817 complement(1436295..1436912) 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpt:Bpet1372 amino acid efflux transmembrane protein; lysine exporter protein LysE/YggA 1436912 8087817 Dd703_1256 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002986881.1 1436295 R 579405 CDS YP_002986882.1 242238701 8087818 complement(1436969..1437745) 1 NC_012880.1 KEGG: bpt:Bpet1371 hypothetical protein; hypothetical protein 1437745 8087818 Dd703_1257 Dickeya dadantii Ech703 hypothetical protein YP_002986882.1 1436969 R 579405 CDS YP_002986883.1 242238702 8087819 1437826..1438773 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet1370 LysR family transcriptional regulator; LysR family transcriptional regulator 1438773 8087819 Dd703_1258 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986883.1 1437826 D 579405 CDS YP_002986884.1 242238703 8087822 1439307..1439450 1 NC_012880.1 hypothetical protein 1439450 8087822 Dd703_1260 Dickeya dadantii Ech703 hypothetical protein YP_002986884.1 1439307 D 579405 CDS YP_002986885.1 242238704 8087823 complement(1439486..1442584) 1 NC_012880.1 forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 1442584 lacZ 8087823 lacZ Dickeya dadantii Ech703 beta-D-galactosidase YP_002986885.1 1439486 R 579405 CDS YP_002986886.1 242238705 8087824 complement(1442727..1443800) 1 NC_012880.1 transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor 1443800 lacI 8087824 lacI Dickeya dadantii Ech703 lac repressor YP_002986886.1 1442727 R 579405 CDS YP_002986887.1 242238706 8087825 complement(1443921..1444631) 1 NC_012880.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: eca:ECA1500 aspartate racemase; aspartate racemase 1444631 8087825 Dd703_1263 Dickeya dadantii Ech703 aspartate racemase YP_002986887.1 1443921 R 579405 CDS YP_002986888.1 242238707 8087826 1444840..1445733 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1501 LysR family transcriptional regulator; LysR family transcriptional regulator 1445733 8087826 Dd703_1264 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986888.1 1444840 D 579405 CDS YP_002986889.1 242238708 8087827 complement(1445801..1447102) 1 NC_012880.1 PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA1503 proton glutamate symport protein; sodium:dicarboxylate symporter 1447102 8087827 Dd703_1265 Dickeya dadantii Ech703 sodium:dicarboxylate symporter YP_002986889.1 1445801 R 579405 CDS YP_002986890.1 242238709 8087828 1447979..1450153 1 NC_012880.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; GAF domain protein; KEGG: yen:YE2811 hydrogenlyase transcriptional activator; Fis family transcriptional regulator 1450153 8087828 Dd703_1266 Dickeya dadantii Ech703 Fis family transcriptional regulator YP_002986890.1 1447979 D 579405 CDS YP_002986891.1 242238710 8087829 1450282..1450470 1 NC_012880.1 PFAM: protein of unknown function DUF1272; KEGG: dac:Daci_2219 hypothetical protein; hypothetical protein 1450470 8087829 Dd703_1267 Dickeya dadantii Ech703 hypothetical protein YP_002986891.1 1450282 D 579405 CDS YP_002986892.1 242238711 8087830 complement(1450903..1453053) 1 NC_012880.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: yen:YE2810 formate dehydrogenase H; formate dehydrogenase subunit alpha 1453053 8087830 Dd703_1268 Dickeya dadantii Ech703 formate dehydrogenase subunit alpha YP_002986892.1 1450903 R 579405 CDS YP_002986893.1 242238712 8087831 complement(1453090..1453632) 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE2809 4Fe-4S ferrodoxin; 4Fe-4S ferredoxin 1453632 8087831 Dd703_1269 Dickeya dadantii Ech703 4Fe-4S ferredoxin YP_002986893.1 1453090 R 579405 CDS YP_002986894.1 242238713 8087832 1453874..1454029 1 NC_012880.1 hypothetical protein 1454029 8087832 Dd703_1270 Dickeya dadantii Ech703 hypothetical protein YP_002986894.1 1453874 D 579405 CDS YP_002986895.1 242238714 8087833 1454026..1454709 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA2115 transcriptional regulator; GntR family transcriptional regulator 1454709 8087833 Dd703_1271 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002986895.1 1454026 D 579405 CDS YP_002986896.1 242238715 8087834 complement(1454905..1456179) 1 NC_012880.1 PFAM: aminotransferase class-III; KEGG: eca:ECA2060 class-III aminotransferase; class III aminotransferase 1456179 8087834 Dd703_1272 Dickeya dadantii Ech703 class III aminotransferase YP_002986896.1 1454905 R 579405 CDS YP_002986897.1 242238716 8087835 complement(1456176..1457225) 1 NC_012880.1 PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA2059 phosphotransferase; aminoglycoside phosphotransferase 1457225 8087835 Dd703_1273 Dickeya dadantii Ech703 aminoglycoside phosphotransferase YP_002986897.1 1456176 R 579405 CDS YP_002986898.1 242238717 8087836 complement(1457218..1457952) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA2058 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1457952 8087836 Dd703_1274 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002986898.1 1457218 R 579405 CDS YP_002986899.1 242238718 8087837 complement(1458192..1459220) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2055 transporter, periplasmic solute-binding protein; family 1 extracellular solute-binding protein 1459220 8087837 Dd703_1275 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002986899.1 1458192 R 579405 CDS YP_002986900.1 242238719 8087838 complement(1459779..1460258) 1 NC_012880.1 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease 1460258 hycI 8087838 hycI Dickeya dadantii Ech703 hydrogenase 3 maturation protease YP_002986900.1 1459779 R 579405 CDS YP_002986901.1 242238720 8087839 complement(1460251..1460652) 1 NC_012880.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: yen:YE2807 hydrogenase-4 component J; formate hydrogenlyase maturation HycH 1460652 8087839 Dd703_1277 Dickeya dadantii Ech703 formate hydrogenlyase maturation HycH YP_002986901.1 1460251 R 579405 CDS YP_002986902.1 242238721 8087840 complement(1460649..1461440) 1 NC_012880.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: yen:YE2806 hydrogenase-4 component I; NADH ubiquinone oxidoreductase 20 kDa subunit 1461440 8087840 Dd703_1278 Dickeya dadantii Ech703 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002986902.1 1460649 R 579405 CDS YP_002986903.1 242238722 8087841 complement(1461437..1462006) 1 NC_012880.1 probable electron transfer protein for hydrogenase 4; hydrogenase 4 is believed to be silent in E. coli under conditions tested so far; hydrogenase 4 subunit H 1462006 8087841 Dd703_1279 Dickeya dadantii Ech703 hydrogenase 4 subunit H YP_002986903.1 1461437 R 579405 CDS YP_002986904.1 242238723 8087842 complement(1462017..1463744) 1 NC_012880.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: yen:YE2804 hydrogenase-4 component G; NADH dehydrogenase (ubiquinone) 30 kDa subunit 1463744 8087842 Dd703_1280 Dickeya dadantii Ech703 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_002986904.1 1462017 R 579405 CDS YP_002986905.1 242238724 8087843 complement(1463737..1465353) 1 NC_012880.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: yen:YE2803 hydrogenase 4 subunit F; hydrogenase 4 subunit F 1465353 8087843 Dd703_1281 Dickeya dadantii Ech703 hydrogenase 4 subunit F YP_002986905.1 1463737 R 579405 CDS YP_002986906.1 242238725 8087844 complement(1465359..1466009) 1 NC_012880.1 interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; hydrogenase 4 membrane subunit 1466009 hyfE 8087844 hyfE Dickeya dadantii Ech703 hydrogenase 4 membrane subunit YP_002986906.1 1465359 R 579405 CDS YP_002986907.1 242238726 8087845 complement(1466019..1467458) 1 NC_012880.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: yen:YE2801 hydrogenase 4 subunit D; hydrogenase 4 subunit D 1467458 8087845 Dd703_1283 Dickeya dadantii Ech703 hydrogenase 4 subunit D YP_002986907.1 1466019 R 579405 CDS YP_002986908.1 242238727 8087846 complement(1467475..1468422) 1 NC_012880.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: yen:YE2800 hydrogenase-4 component C; respiratory-chain NADH dehydrogenase subunit 1 1468422 8087846 Dd703_1284 Dickeya dadantii Ech703 respiratory-chain NADH dehydrogenase subunit 1 YP_002986908.1 1467475 R 579405 CDS YP_002986909.1 242238728 8087847 complement(1468435..1470456) 1 NC_012880.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: yen:YE2799 hydrogenase 4 subunit B; hydrogenase 4 subunit B 1470456 8087847 Dd703_1285 Dickeya dadantii Ech703 hydrogenase 4 subunit B YP_002986909.1 1468435 R 579405 CDS YP_002986910.1 242238729 8087848 complement(1470453..1471079) 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE2798 hydrogenase-4 component A; 4Fe-4S ferredoxin 1471079 8087848 Dd703_1286 Dickeya dadantii Ech703 4Fe-4S ferredoxin YP_002986910.1 1470453 R 579405 CDS YP_002986911.1 242238730 8087849 1471536..1471802 1 NC_012880.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: yen:YE2796 hydrogenase isoenzymes formation protein; hydrogenase assembly chaperone HypC/HupF 1471802 8087849 Dd703_1287 Dickeya dadantii Ech703 hydrogenase assembly chaperone HypC/HupF YP_002986911.1 1471536 D 579405 CDS YP_002986912.1 242238731 8087850 complement(1471848..1472831) 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2538 hypothetical protein; hypothetical protein 1472831 8087850 Dd703_1288 Dickeya dadantii Ech703 hypothetical protein YP_002986912.1 1471848 R 579405 CDS YP_002986913.1 242238732 8087851 1473012..1473965 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1519 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein 1473965 8087851 Dd703_1289 Dickeya dadantii Ech703 transcriptional regulator CysB-like protein YP_002986913.1 1473012 D 579405 CDS YP_002986914.1 242238733 8087852 1474501..1475832 1 NC_012880.1 PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA1520 glutamate/aspartate:proton symporter; sodium:dicarboxylate symporter 1475832 8087852 Dd703_1290 Dickeya dadantii Ech703 sodium:dicarboxylate symporter YP_002986914.1 1474501 D 579405 CDS YP_002986915.1 242238734 8087853 complement(1475926..1476732) 1 NC_012880.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bav:BAV1173 AraC-family transcriptional regulator; AraC family transcriptional regulator 1476732 8087853 Dd703_1291 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002986915.1 1475926 R 579405 CDS YP_002986916.1 242238735 8087854 1477014..1478690 1 NC_012880.1 PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bav:BAV1174 2-isopropylmalate synthase; 2-isopropylmalate synthase 1478690 8087854 Dd703_1292 Dickeya dadantii Ech703 2-isopropylmalate synthase YP_002986916.1 1477014 D 579405 CDS YP_002986917.1 242238736 8087855 1479141..1479884 1 NC_012880.1 PFAM: protein of unknown function UPF0153; KEGG: scl:sce4748 hypothetical protein; hypothetical protein 1479884 8087855 Dd703_1293 Dickeya dadantii Ech703 hypothetical protein YP_002986917.1 1479141 D 579405 CDS YP_002986918.1 242238737 8087856 1479926..1480495 1 NC_012880.1 KEGG: xac:XAC0538 hypothetical protein; hypothetical protein 1480495 8087856 Dd703_1294 Dickeya dadantii Ech703 hypothetical protein YP_002986918.1 1479926 D 579405 CDS YP_002986919.1 242238738 8087857 1480697..1481461 1 NC_012880.1 PFAM: protein of unknown function DUF218; KEGG: eum:ECUMN_1662 hypothetical protein; hypothetical protein 1481461 8087857 Dd703_1295 Dickeya dadantii Ech703 hypothetical protein YP_002986919.1 1480697 D 579405 CDS YP_002986920.1 242238739 8087858 complement(1481535..1482554) 1 NC_012880.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: eca:ECA1523 glycerol dehydrogenase; iron-containing alcohol dehydrogenase 1482554 8087858 Dd703_1296 Dickeya dadantii Ech703 iron-containing alcohol dehydrogenase YP_002986920.1 1481535 R 579405 CDS YP_002986921.1 242238740 8087859 complement(1482599..1483465) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1524 ABC transporter permease; binding-protein-dependent transporters inner membrane component 1483465 8087859 Dd703_1297 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986921.1 1482599 R 579405 CDS YP_002986922.1 242238741 8087860 complement(1483437..1484273) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1525 ABC transporter ATP-binding protein; ABC transporter 1484273 8087860 Dd703_1298 Dickeya dadantii Ech703 ABC transporter YP_002986922.1 1483437 R 579405 CDS YP_002986923.1 242238742 8087861 complement(1484297..1485385) 1 NC_012880.1 KEGG: eca:ECA1526 ABC transporter periplasmic protein; ABC transporter substrate-binding protein 1485385 8087861 Dd703_1299 Dickeya dadantii Ech703 ABC transporter substrate-binding protein YP_002986923.1 1484297 R 579405 CDS YP_002986924.1 242238743 8087862 1486234..1487256 1 NC_012880.1 PFAM: malate/L-lactate dehydrogenase; KEGG: eca:ECA1527 malate/lactate dehydrogenase; malate/L-lactate dehydrogenase 1487256 8087862 Dd703_1300 Dickeya dadantii Ech703 malate/L-lactate dehydrogenase YP_002986924.1 1486234 D 579405 CDS YP_002986925.1 242238744 8087863 1487509..1488519 1 NC_012880.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 1488519 8087863 Dd703_1301 Dickeya dadantii Ech703 D-cysteine desulfhydrase YP_002986925.1 1487509 D 579405 CDS YP_002986926.1 242238745 8087864 1488519..1489244 1 NC_012880.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: eca:ECA1532 aspartate racemase; aspartate racemase 1489244 8087864 Dd703_1302 Dickeya dadantii Ech703 aspartate racemase YP_002986926.1 1488519 D 579405 CDS YP_002986927.1 242238746 8087865 1489712..1491136 1 NC_012880.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 1491136 8087865 Dd703_1303 Dickeya dadantii Ech703 gamma-aminobutyraldehyde dehydrogenase YP_002986927.1 1489712 D 579405 CDS YP_002986928.1 242238747 8087866 1491454..1492872 1 NC_012880.1 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase 1492872 8087866 Dd703_1304 Dickeya dadantii Ech703 putrescine--2-oxoglutarate aminotransferase YP_002986928.1 1491454 D 579405 CDS YP_002986929.1 242238748 8087867 1493436..1494281 1 NC_012880.1 hypothetical protein 1494281 8087867 Dd703_1305 Dickeya dadantii Ech703 hypothetical protein YP_002986929.1 1493436 D 579405 CDS YP_002986930.1 242238749 8087868 1494278..1495522 1 NC_012880.1 KEGG: sml:Smlt1844 modification methylase; hypothetical protein 1495522 8087868 Dd703_1306 Dickeya dadantii Ech703 hypothetical protein YP_002986930.1 1494278 D 579405 CDS YP_002986931.1 242238750 8087869 1496334..1497053 1 NC_012880.1 may be involved in phosphonate uptake and biodegradation; phosphonate metabolism transcriptional regulator PhnF 1497053 8087869 Dd703_1307 Dickeya dadantii Ech703 phosphonate metabolism transcriptional regulator PhnF YP_002986931.1 1496334 D 579405 CDS YP_002986932.1 242238751 8087870 1497054..1497503 1 NC_012880.1 TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: spe:Spro_0521 phosphonate metabolism PhnG; phosphonate C-P lyase system protein PhnG 1497503 8087870 Dd703_1308 Dickeya dadantii Ech703 phosphonate C-P lyase system protein PhnG YP_002986932.1 1497054 D 579405 CDS YP_002986933.1 242238752 8087871 1497500..1498093 1 NC_012880.1 TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: ypg:YpAngola_A4030 carbon-phosphorus lyase complex subunit; phosphonate C-P lyase system protein PhnH 1498093 8087871 Dd703_1309 Dickeya dadantii Ech703 phosphonate C-P lyase system protein PhnH YP_002986933.1 1497500 D 579405 CDS YP_002986934.1 242238753 8087872 1498093..1499175 1 NC_012880.1 PFAM: phosphonate metabolism; KEGG: spe:Spro_0519 phosphonate metabolism; phosphonate metabolism protein 1499175 8087872 Dd703_1310 Dickeya dadantii Ech703 phosphonate metabolism protein YP_002986934.1 1498093 D 579405 CDS YP_002986935.1 242238754 8087873 1499162..1500013 1 NC_012880.1 PFAM: phosphonate metabolism PhnJ; KEGG: yps:YPTB0513 protein in phn operon; phosphonate metabolism PhnJ 1500013 8087873 Dd703_1311 Dickeya dadantii Ech703 phosphonate metabolism PhnJ YP_002986935.1 1499162 D 579405 CDS YP_002986936.1 242238755 8087874 1500003..1500791 1 NC_012880.1 KEGG: yen:YE0473 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: ATPase AAA; phosphonate C-P lyase system protein PhnK 1500791 phnK 8087874 phnK Dickeya dadantii Ech703 phosphonate C-P lyase system protein PhnK YP_002986936.1 1500003 D 579405 CDS YP_002986937.1 242238756 8087875 1500811..1501515 1 NC_012880.1 KEGG: ypg:YpAngola_A4026 phosphonate ABC transporter ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter; SMART: ATPase AAA; phosphonate C-P lyase system protein PhnL 1501515 8087875 Dd703_1313 Dickeya dadantii Ech703 phosphonate C-P lyase system protein PhnL YP_002986937.1 1500811 D 579405 CDS YP_002986938.1 242238757 8087876 1501512..1502648 1 NC_012880.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; amidohydrolase; KEGG: spe:Spro_0515 phosphonate metabolism protein PhnM; phosphonate metabolism protein PhnM 1502648 8087876 Dd703_1314 Dickeya dadantii Ech703 phosphonate metabolism protein PhnM YP_002986938.1 1501512 D 579405 CDS YP_002986939.1 242238758 8087877 1502648..1503190 1 NC_012880.1 TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: yen:YE0470 ribose 1,5-bisphosphokinase; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 1503190 8087877 Dd703_1315 Dickeya dadantii Ech703 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN YP_002986939.1 1502648 D 579405 CDS YP_002986940.1 242238759 8087878 1503181..1503930 1 NC_012880.1 TIGRFAM: phosphonate metabolism protein PhnP; PFAM: beta-lactamase; KEGG: spe:Spro_0512 carbon-phosphorus lyase complex accessory protein; phosphonate metabolism protein PhnP 1503930 8087878 Dd703_1316 Dickeya dadantii Ech703 phosphonate metabolism protein PhnP YP_002986940.1 1503181 D 579405 CDS YP_002986941.1 242238760 8087879 complement(1503985..1504899) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rle:RL2486 LysR family transcriptional regulator; LysR family transcriptional regulator 1504899 8087879 Dd703_1317 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986941.1 1503985 R 579405 CDS YP_002986942.1 242238761 8087880 1505043..1506467 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: pna:Pnap_1660 major facilitator superfamily transporter; major facilitator superfamily protein 1506467 8087880 Dd703_1318 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986942.1 1505043 D 579405 CDS YP_002986943.1 242238762 8087881 1506588..1507424 1 NC_012880.1 KEGG: spe:Spro_1410 phosphonate ABC transporter ATPase subunit; TIGRFAM: phosphonate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; phosphonate ABC transporter ATPase 1507424 8087881 Dd703_1319 Dickeya dadantii Ech703 phosphonate ABC transporter ATPase YP_002986943.1 1506588 D 579405 CDS YP_002986944.1 242238763 8087882 1507487..1508419 1 NC_012880.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: spe:Spro_1411 phosphonate ABC transporter periplasmic phosphonate-binding protein; phosphonate ABC transporter substrate-binding protein 1508419 8087882 Dd703_1320 Dickeya dadantii Ech703 phosphonate ABC transporter substrate-binding protein YP_002986944.1 1507487 D 579405 CDS YP_002986945.1 242238764 8087883 1508545..1509411 1 NC_012880.1 TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_1412 phosphonate ABC transporter inner membrane subunit; phosphonate ABC transporter permease 1509411 8087883 Dd703_1321 Dickeya dadantii Ech703 phosphonate ABC transporter permease YP_002986945.1 1508545 D 579405 CDS YP_002986946.1 242238765 8087884 1509408..1510310 1 NC_012880.1 TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_1413 phosphonate ABC transporter inner membrane subunit; phosphonate ABC transporter permease 1510310 8087884 Dd703_1322 Dickeya dadantii Ech703 phosphonate ABC transporter permease YP_002986946.1 1509408 D 579405 CDS YP_002986947.1 242238766 8087885 1510285..1511031 1 NC_012880.1 PFAM: ABC transporter; KEGG: psp:PSPPH_2760 achromobactin transport ATP-binding protein CbrD; ABC transporter 1511031 8087885 Dd703_1323 Dickeya dadantii Ech703 ABC transporter YP_002986947.1 1510285 D 579405 CDS YP_002986948.1 242238767 8087886 complement(1511181..1511591) 1 NC_012880.1 PFAM: protein of unknown function UPF0150; KEGG: hsm:HSM_0889 hypothetical protein; hypothetical protein 1511591 8087886 Dd703_1324 Dickeya dadantii Ech703 hypothetical protein YP_002986948.1 1511181 R 579405 CDS YP_002986949.1 242238768 8087887 complement(1511619..1511798) 1 NC_012880.1 PFAM: YcfA family protein; KEGG: bte:BTH_II1999 hypothetical protein; hypothetical protein 1511798 8087887 Dd703_1325 Dickeya dadantii Ech703 hypothetical protein YP_002986949.1 1511619 R 579405 CDS YP_002986950.1 242238769 8087888 complement(1512086..1513852) 1 NC_012880.1 KEGG: ecw:EcE24377A_1771 hypothetical protein; hypothetical protein 1513852 8087888 Dd703_1326 Dickeya dadantii Ech703 hypothetical protein YP_002986950.1 1512086 R 579405 CDS YP_002986951.1 242238770 8087889 complement(1514168..1515223) 1 NC_012880.1 KEGG: bba:Bd0901 Zn-dependent hydrolase; Zn-dependent hydrolase 1515223 8087889 Dd703_1327 Dickeya dadantii Ech703 Zn-dependent hydrolase YP_002986951.1 1514168 R 579405 CDS YP_002986952.1 242238771 8087890 1515399..1515665 1 NC_012880.1 hypothetical protein 1515665 8087890 Dd703_1328 Dickeya dadantii Ech703 hypothetical protein YP_002986952.1 1515399 D 579405 CDS YP_002986953.1 242238772 8087891 1515662..1516549 1 NC_012880.1 PFAM: dihydrodipicolinate synthetase; KEGG: smd:Smed_4167 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 1516549 8087891 Dd703_1329 Dickeya dadantii Ech703 dihydrodipicolinate synthetase YP_002986953.1 1515662 D 579405 CDS YP_002986954.1 242238773 8087892 complement(1516702..1517982) 1 NC_012880.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 1517982 lacY 8087892 lacY Dickeya dadantii Ech703 galactoside permease YP_002986954.1 1516702 R 579405 CDS YP_002986955.1 242238774 8087893 complement(1518035..1520164) 1 NC_012880.1 PFAM: glycoside hydrolase clan GH-D; KEGG: esa:ESA_03854 hypothetical protein; glycoside hydrolase clan GH-D 1520164 8087893 Dd703_1331 Dickeya dadantii Ech703 glycoside hydrolase clan GH-D YP_002986955.1 1518035 R 579405 CDS YP_002986956.1 242238775 8087894 complement(1520301..1521326) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ent:Ent638_4078 LacI family transcription regulator; LacI family transcriptional regulator 1521326 8087894 Dd703_1332 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002986956.1 1520301 R 579405 CDS YP_002986957.1 242238776 8087895 complement(1521821..1522462) 1 NC_012880.1 nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase; formate dehydrogenase-N subunit gamma 1522462 8087895 Dd703_1333 Dickeya dadantii Ech703 formate dehydrogenase-N subunit gamma YP_002986957.1 1521821 R 579405 CDS YP_002986958.1 242238777 8087896 complement(1522455..1523363) 1 NC_012880.1 TIGRFAM: formate dehydrogenase subunit beta; PFAM: formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA1407 formate dehydrogenase, nitrate-inducible, iron-sulfur subunit; formate dehydrogenase subunit beta 1523363 8087896 Dd703_1334 Dickeya dadantii Ech703 formate dehydrogenase subunit beta YP_002986958.1 1522455 R 579405 CDS YP_002986959.1 242238778 8087897 complement(1523376..1526423) 1 NC_012880.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: eca:ECA1408 formate dehydrogenase, nitrate-inducible, major subunit; formate dehydrogenase subunit alpha 1526423 8087897 Dd703_1335 Dickeya dadantii Ech703 formate dehydrogenase subunit alpha YP_002986959.1 1523376 R 579405 CDS YP_002986960.1 242238779 8087898 complement(1526744..1527562) 1 NC_012880.1 PFAM: peptidase C1A papain; SMART: peptidase C1A papain; KEGG: xft:PD0125 cysteine protease; peptidase C1A papain 1527562 8087898 Dd703_1336 Dickeya dadantii Ech703 peptidase C1A papain YP_002986960.1 1526744 R 579405 CDS YP_002986961.1 242238780 8087899 1527756..1528604 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_13850 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1528604 8087899 Dd703_1337 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002986961.1 1527756 D 579405 CDS YP_002986962.1 242238781 8087900 complement(1528609..1530018) 1 NC_012880.1 KEGG: ent:Ent638_2009 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1530018 8087900 Dd703_1338 Dickeya dadantii Ech703 diguanylate cyclase YP_002986962.1 1528609 R 579405 CDS YP_002986963.1 242238782 8087901 complement(1530233..1530958) 1 NC_012880.1 KEGG: spe:Spro_1006 periplasmic ligand-binding sensor protein; periplasmic ligand-binding sensor protein 1530958 8087901 Dd703_1339 Dickeya dadantii Ech703 periplasmic ligand-binding sensor protein YP_002986963.1 1530233 R 579405 CDS YP_002986964.1 242238783 8087902 1531408..1532439 1 NC_012880.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: kpn:KPN_01655 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 1532439 8087902 Dd703_1340 Dickeya dadantii Ech703 2OG-Fe(II) oxygenase YP_002986964.1 1531408 D 579405 CDS YP_002986965.1 242238784 8087903 1532490..1533299 1 NC_012880.1 PFAM: NLPA lipoprotein; KEGG: yen:YE1466 hypothetical protein; NLPA lipoprotein 1533299 8087903 Dd703_1341 Dickeya dadantii Ech703 NLPA lipoprotein YP_002986965.1 1532490 D 579405 CDS YP_002986966.1 242238785 8087904 1533299..1534090 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: esa:ESA_02818 hypothetical protein; ABC transporter 1534090 8087904 Dd703_1342 Dickeya dadantii Ech703 ABC transporter YP_002986966.1 1533299 D 579405 CDS YP_002986967.1 242238786 8087905 1534075..1534746 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpe:KPK_2723 methionine uptake ABC transporter (MUT) family, permease; binding-protein-dependent transporters inner membrane component 1534746 8087905 Dd703_1343 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986967.1 1534075 D 579405 CDS YP_002986968.1 242238787 8087906 complement(1534861..1535964) 1 NC_012880.1 PFAM: ROK family protein; KEGG: avi:Avi_5249 transcriptional regulator ROK family; ROK family protein 1535964 8087906 Dd703_1344 Dickeya dadantii Ech703 ROK family protein YP_002986968.1 1534861 R 579405 CDS YP_002986969.1 242238788 8087907 1536070..1537440 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_1296 multiple sugar transporter substrate-binding protein; family 1 extracellular solute-binding protein 1537440 8087907 Dd703_1345 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002986969.1 1536070 D 579405 CDS YP_002986970.1 242238789 8087908 1537490..1538407 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_5252 ABC transporter membrane spanning protein (sugar); binding-protein-dependent transporters inner membrane component 1538407 8087908 Dd703_1346 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986970.1 1537490 D 579405 CDS YP_002986971.1 242238790 8087909 1538404..1539447 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_5253 ABC transporter membrane spanning protein (sugars); binding-protein-dependent transporters inner membrane component 1539447 8087909 Dd703_1347 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986971.1 1538404 D 579405 CDS YP_002986972.1 242238791 8087910 1539451..1540554 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: avi:Avi_5254 ABC transporter nucleotide binding/ATPase protein (sugar); ABC transporter 1540554 8087910 Dd703_1348 Dickeya dadantii Ech703 ABC transporter YP_002986972.1 1539451 D 579405 CDS YP_002986973.1 242238792 8087911 1540624..1541487 1 NC_012880.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mlo:mll3063 hypothetical protein; endonuclease/exonuclease/phosphatase 1541487 8087911 Dd703_1349 Dickeya dadantii Ech703 endonuclease/exonuclease/phosphatase YP_002986973.1 1540624 D 579405 CDS YP_002986974.1 242238793 8087912 1542059..1542403 1 NC_012880.1 KEGG: hypothetical protein; hypothetical protein 1542403 8087912 Dd703_1350 Dickeya dadantii Ech703 hypothetical protein YP_002986974.1 1542059 D 579405 CDS YP_002986975.1 242238794 8087913 complement(1542635..1544437) 1 NC_012880.1 PFAM: thioredoxin domain; KEGG: eca:ECA1555 hypothetical protein; thioredoxin 1544437 8087913 Dd703_1351 Dickeya dadantii Ech703 thioredoxin YP_002986975.1 1542635 R 579405 CDS YP_002986976.1 242238795 8087914 complement(1544516..1545304) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1556 sulfate ester transporter ATP-binding component; ABC transporter 1545304 8087914 Dd703_1352 Dickeya dadantii Ech703 ABC transporter YP_002986976.1 1544516 R 579405 CDS YP_002986977.1 242238796 8087915 complement(1545301..1546995) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1557 sulfate ester transporter permease; binding-protein-dependent transporters inner membrane component 1546995 8087915 Dd703_1353 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002986977.1 1545301 R 579405 CDS YP_002986978.1 242238797 8087916 1547119..1548201 1 NC_012880.1 KEGG: eca:ECA1558 sulfate ester transporter periplasmic binding component; sulfate ester transporter periplasmic binding component 1548201 8087916 Dd703_1354 Dickeya dadantii Ech703 sulfate ester transporter periplasmic binding component YP_002986978.1 1547119 D 579405 CDS YP_002986979.1 242238798 8087917 complement(1548219..1549142) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1559 LysR family transcriptional regulator; LysR family transcriptional regulator 1549142 8087917 Dd703_1355 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986979.1 1548219 R 579405 CDS YP_002986980.1 242238799 8087918 complement(1549385..1550155) 1 NC_012880.1 PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: eca:ECA1560 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase 1550155 8087918 Dd703_1356 Dickeya dadantii Ech703 CDP-diacylglycerol pyrophosphatase YP_002986980.1 1549385 R 579405 CDS YP_002986981.1 242238800 8087919 1550591..1551640 1 NC_012880.1 KEGG: hypothetical protein; hypothetical protein 1551640 8087919 Dd703_1357 Dickeya dadantii Ech703 hypothetical protein YP_002986981.1 1550591 D 579405 CDS YP_002986982.1 242238801 8087920 complement(1551745..1553802) 1 NC_012880.1 KEGG: sbm:Shew185_1326 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1553802 8087920 Dd703_1358 Dickeya dadantii Ech703 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_002986982.1 1551745 R 579405 CDS YP_002986983.1 242238802 8087921 complement(1554166..1555509) 1 NC_012880.1 PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: kpe:KPK_1612 inorganic anion transporter sulfate permease (SulP) family; xanthine/uracil/vitamin C permease 1555509 8087921 Dd703_1359 Dickeya dadantii Ech703 xanthine/uracil/vitamin C permease YP_002986983.1 1554166 R 579405 CDS YP_002986984.1 242238803 8087922 complement(1555543..1557339) 1 NC_012880.1 PFAM: amidohydrolase; KEGG: spe:Spro_1116 adenine deaminase; adenine deaminase 1557339 8087922 Dd703_1360 Dickeya dadantii Ech703 adenine deaminase YP_002986984.1 1555543 R 579405 CDS YP_002986985.1 242238804 8087923 1557466..1558395 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1117 LysR family transcriptional regulator; LysR family transcriptional regulator 1558395 8087923 Dd703_1361 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986985.1 1557466 D 579405 CDS YP_002986986.1 242238805 8087924 complement(1558512..1560698) 1 NC_012880.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: hch:HCH_03207 catalase/peroxidase HPI; catalase/peroxidase HPI 1560698 8087924 Dd703_1362 Dickeya dadantii Ech703 catalase/peroxidase HPI YP_002986986.1 1558512 R 579405 CDS YP_002986987.1 242238806 8087925 complement(1561187..1562644) 1 NC_012880.1 PFAM: sigma-54 factor interaction domain-containing protein; SMART: ATPase AAA; KEGG: dal:Dalk_1286 PAS modulated sigma54 specific Fis family transcriptional regulator; sigma-54 specific transcriptional regulator 1562644 8087925 Dd703_1363 Dickeya dadantii Ech703 sigma-54 specific transcriptional regulator YP_002986987.1 1561187 R 579405 CDS YP_002986988.1 242238807 8087926 1563033..1564418 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0912 hypothetical protein; major facilitator superfamily protein 1564418 8087926 Dd703_1364 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002986988.1 1563033 D 579405 CDS YP_002986989.1 242238808 8087927 1564471..1566357 1 NC_012880.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FMN-binding domain protein; FAD dependent oxidoreductase; HI0933 family protein; KEGG: eca:ECA0910 flavoprotein subunit of a reductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1566357 8087927 Dd703_1365 Dickeya dadantii Ech703 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_002986989.1 1564471 D 579405 CDS YP_002986990.1 242238809 8087928 1566592..1567977 1 NC_012880.1 PFAM: carbohydrate-selective porin OprB; KEGG: mch:Mchl_1436 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 1567977 8087928 Dd703_1366 Dickeya dadantii Ech703 carbohydrate-selective porin OprB YP_002986990.1 1566592 D 579405 CDS YP_002986991.1 242238810 8087929 complement(1568023..1568976) 1 NC_012880.1 PFAM: polysulphide reductase NrfD; KEGG: eca:ECA0913 component of polysulfide reductase; polysulfide reductase NrfD 1568976 8087929 Dd703_1367 Dickeya dadantii Ech703 polysulfide reductase NrfD YP_002986991.1 1568023 R 579405 CDS YP_002986992.1 242238811 8087930 complement(1569003..1569704) 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA0914 component of polysulfide reductase; 4Fe-4S ferredoxin 1569704 8087930 Dd703_1368 Dickeya dadantii Ech703 4Fe-4S ferredoxin YP_002986992.1 1569003 R 579405 CDS YP_002986993.1 242238812 8087931 1570294..1571202 1 NC_012880.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_0633 LysR family transcriptional regulator; LysR family transcriptional regulator 1571202 8087931 Dd703_1369 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002986993.1 1570294 D 579405 CDS YP_002986994.1 242238813 8087932 complement(1571259..1572254) 1 NC_012880.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_0631 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1572254 8087932 Dd703_1370 Dickeya dadantii Ech703 enoyl-CoA hydratase/isomerase YP_002986994.1 1571259 R 579405 CDS YP_002986995.1 242238814 8087933 1572600..1572737 1 NC_012880.1 hypothetical protein 1572737 8087933 Dd703_1371 Dickeya dadantii Ech703 hypothetical protein YP_002986995.1 1572600 D 579405 CDS YP_002986996.1 242238815 8087934 1573119..1573967 1 NC_012880.1 PFAM: protein of unknown function DUF849; KEGG: rpc:RPC_0635 hypothetical protein; hypothetical protein 1573967 8087934 Dd703_1372 Dickeya dadantii Ech703 hypothetical protein YP_002986996.1 1573119 D 579405 CDS YP_002986997.1 242238816 8087935 1574045..1575214 1 NC_012880.1 KEGG: rpc:RPC_0636 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase; acetyl-CoA acetyltransferase 1575214 8087935 Dd703_1373 Dickeya dadantii Ech703 acetyl-CoA acetyltransferase YP_002986997.1 1574045 D 579405 CDS YP_002986998.1 242238817 8087936 1575217..1575882 1 NC_012880.1 KEGG: rpc:RPC_0637 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, subunit alpha; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 1575882 8087936 Dd703_1374 Dickeya dadantii Ech703 3-oxoacid CoA-transferase subunit A YP_002986998.1 1575217 D 579405 CDS YP_002986999.1 242238818 8087937 1575879..1576523 1 NC_012880.1 PFAM: coenzyme A transferase; KEGG: rpc:RPC_0638 3-oxoacid CoA-transferase; 3-oxoacid CoA-transferase 1576523 8087937 Dd703_1375 Dickeya dadantii Ech703 3-oxoacid CoA-transferase YP_002986999.1 1575879 D 579405 CDS YP_002987000.1 242238819 8087938 1576703..1578022 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_0639 major facilitator transporter; major facilitator superfamily protein 1578022 8087938 Dd703_1376 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987000.1 1576703 D 579405 CDS YP_002987001.1 242238820 8087939 1578085..1579059 1 NC_012880.1 KEGG: rpc:RPC_0632 MetA-pathway phenol degradation-like protein; MetA-pathway phenol degradation-like protein 1579059 8087939 Dd703_1377 Dickeya dadantii Ech703 MetA-pathway phenol degradation-like protein YP_002987001.1 1578085 D 579405 CDS YP_002987002.1 242238821 8087940 1579314..1580492 1 NC_012880.1 KEGG: cko:CKO_00545 hypothetical protein; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase; acetyl-CoA acetyltransferase 1580492 8087940 Dd703_1378 Dickeya dadantii Ech703 acetyl-CoA acetyltransferase YP_002987002.1 1579314 D 579405 CDS YP_002987003.1 242238822 8087941 complement(1580553..1581575) 1 NC_012880.1 PFAM: PfkB domain protein; KEGG: sus:acid_2122 ribokinase-like domain-containing protein; PfkB domain-containing protein 1581575 8087941 Dd703_1379 Dickeya dadantii Ech703 PfkB domain-containing protein YP_002987003.1 1580553 R 579405 CDS YP_002987004.1 242238823 8087942 1582029..1582385 1 NC_012880.1 PFAM: Domain of unknown function DUF1870; KEGG: ecz:ECS88_1739 hypothetical protein; hypothetical protein 1582385 8087942 Dd703_1380 Dickeya dadantii Ech703 hypothetical protein YP_002987004.1 1582029 D 579405 CDS YP_002987005.1 242238824 8087943 1582398..1582964 1 NC_012880.1 PFAM: shikimate kinase; KEGG: efe:EFER_2635 shikimate kinase II (SKII); shikimate kinase 1582964 8087943 Dd703_1381 Dickeya dadantii Ech703 shikimate kinase YP_002987005.1 1582398 D 579405 CDS YP_002987006.1 242238825 8087944 1583811..1585052 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transporter YdiM; major facilitator superfamily protein 1585052 8087944 Dd703_1382 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987006.1 1583811 D 579405 CDS YP_002987007.1 242238826 8087945 complement(1585255..1586157) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4670 LysR family transcriptional regulator; LysR family transcriptional regulator 1586157 8087945 Dd703_1383 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987007.1 1585255 R 579405 CDS YP_002987008.1 242238827 8087946 1586922..1588190 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: ecv:APECO1_767 predicted transporter; major facilitator superfamily protein 1588190 8087946 Dd703_1384 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987008.1 1586922 D 579405 CDS YP_002987009.1 242238828 8087947 1588259..1589128 1 NC_012880.1 YdiB; quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate; quinate/shikimate dehydrogenase 1589128 8087947 Dd703_1385 Dickeya dadantii Ech703 quinate/shikimate dehydrogenase YP_002987009.1 1588259 D 579405 CDS YP_002987010.1 242238829 8087948 1589307..1590065 1 NC_012880.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 1590065 aroD 8087948 aroD Dickeya dadantii Ech703 3-dehydroquinate dehydratase YP_002987010.1 1589307 D 579405 CDS YP_002987011.1 242238830 8087949 1590455..1592050 1 NC_012880.1 PFAM: coenzyme A transferase; KEGG: elf:LF82_2872 uncharacterized protein YdiF; coenzyme A transferase 1592050 8087949 Dd703_1387 Dickeya dadantii Ech703 coenzyme A transferase YP_002987011.1 1590455 D 579405 CDS YP_002987012.1 242238831 8087950 1592065..1593216 1 NC_012880.1 may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain; acyl-CoA dehydrogenase 1593216 8087950 Dd703_1388 Dickeya dadantii Ech703 acyl-CoA dehydrogenase YP_002987012.1 1592065 D 579405 CDS YP_002987013.1 242238832 8087951 1593922..1594935 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA2295 AraC family transcription regulator; AraC family transcriptional regulator 1594935 8087951 Dd703_1389 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002987013.1 1593922 D 579405 CDS YP_002987014.1 242238833 8087952 complement(1595409..1597130) 1 NC_012880.1 PFAM: chitin synthase; KEGG: eca:ECA2046 bifunctional enzyme including aminotransferase and chitin synthase; chitin synthase 1597130 8087952 Dd703_1390 Dickeya dadantii Ech703 chitin synthase YP_002987014.1 1595409 R 579405 CDS YP_002987015.1 242238834 8087953 complement(1597830..1599173) 1 NC_012880.1 PFAM: outer membrane porin; KEGG: yen:YE2976 hypothetical protein; outer membrane porin 1599173 8087953 Dd703_1391 Dickeya dadantii Ech703 outer membrane porin YP_002987015.1 1597830 R 579405 CDS YP_002987016.1 242238835 8087954 1599578..1599727 1 NC_012880.1 hypothetical protein 1599727 8087954 Dd703_1392 Dickeya dadantii Ech703 hypothetical protein YP_002987016.1 1599578 D 579405 CDS YP_002987017.1 242238836 8087955 complement(1599984..1600895) 1 NC_012880.1 PFAM: cupin; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ecz:ECS88_1746 DNA-binding transcriptional regulator; AraC family transcriptional regulator 1600895 8087955 Dd703_1393 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002987017.1 1599984 R 579405 CDS YP_002987018.1 242238837 8087956 1601520..1601654 1 NC_012880.1 hypothetical protein 1601654 8087956 Dd703_1394 Dickeya dadantii Ech703 hypothetical protein YP_002987018.1 1601520 D 579405 CDS YP_002987019.1 242238838 8087957 1601669..1602433 1 NC_012880.1 YdiO, YdiQ, YdiR, YdiS, and YdiT may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain; electron transfer flavoprotein YdiQ 1602433 8087957 Dd703_1395 Dickeya dadantii Ech703 electron transfer flavoprotein YdiQ YP_002987019.1 1601669 D 579405 CDS YP_002987020.1 242238839 8087958 1602455..1603408 1 NC_012880.1 May play a role in a redox process; electron transfer flavoprotein subunit YdiR 1603408 8087958 Dd703_1396 Dickeya dadantii Ech703 electron transfer flavoprotein subunit YdiR YP_002987020.1 1602455 D 579405 CDS YP_002987021.1 242238840 8087959 1603460..1604749 1 NC_012880.1 PFAM: FAD dependent oxidoreductase; monooxygenase FAD-binding; HI0933 family protein; KEGG: ecq:ECED1_1901 oxidoreductase subunit with FAD/NAD(P)-binding domain; hypothetical protein 1604749 8087959 Dd703_1397 Dickeya dadantii Ech703 hypothetical protein YP_002987021.1 1603460 D 579405 CDS YP_002987022.1 242238841 8087960 1604746..1605039 1 NC_012880.1 KEGG: set:SEN1693 ferredoxin; ferredoxin 1605039 8087960 Dd703_1398 Dickeya dadantii Ech703 ferredoxin YP_002987022.1 1604746 D 579405 CDS YP_002987023.1 242238842 8087961 1605298..1606965 1 NC_012880.1 acts in anaerobic beta-oxidation of fatty acids; ligase/synthase involved in anaerobic growth on fatty acids; short chain acyl-CoA synthetase 1606965 8087961 Dd703_1399 Dickeya dadantii Ech703 short chain acyl-CoA synthetase YP_002987023.1 1605298 D 579405 CDS YP_002987024.1 242238843 8087962 complement(1607046..1608035) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pna:Pnap_2708 AraC family transcriptional regulator; AraC family transcriptional regulator 1608035 8087962 Dd703_1400 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002987024.1 1607046 R 579405 CDS YP_002987025.1 242238844 8087963 complement(1608134..1609438) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: see:SNSL254_A1655 membrane transporter; major facilitator superfamily protein 1609438 8087963 Dd703_1401 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987025.1 1608134 R 579405 CDS YP_002987026.1 242238845 8087964 complement(1609675..1610841) 1 NC_012880.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: cak:Caul_0413 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein 1610841 8087964 Dd703_1402 Dickeya dadantii Ech703 acyl-CoA dehydrogenase domain-containing protein YP_002987026.1 1609675 R 579405 CDS YP_002987027.1 242238846 8087965 1611479..1612624 1 NC_012880.1 may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain; acyl-CoA dehydrogenase 1612624 8087965 Dd703_1403 Dickeya dadantii Ech703 acyl-CoA dehydrogenase YP_002987027.1 1611479 D 579405 CDS YP_002987028.1 242238847 8087966 1612627..1613190 1 NC_012880.1 PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: dat:HRM2_42000 Dfx; desulfoferrodoxin ferrous iron-binding region 1613190 8087966 Dd703_1404 Dickeya dadantii Ech703 desulfoferrodoxin ferrous iron-binding region YP_002987028.1 1612627 D 579405 CDS YP_002987029.1 242238848 8087967 1613485..1615362 1 NC_012880.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA0661 PTS system, beta-glucoside-specific IIABC component; PTS system beta-glucoside-specific transporter subunit IIABC 1615362 8087967 Dd703_1405 Dickeya dadantii Ech703 PTS system beta-glucoside-specific transporter subunit IIABC YP_002987029.1 1613485 D 579405 CDS YP_002987030.1 242238849 8087968 1615397..1616227 1 NC_012880.1 PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: eca:ECA1452 beta-glucoside operon antiterminator; transcriptional antiterminator BglG 1616227 8087968 Dd703_1406 Dickeya dadantii Ech703 transcriptional antiterminator BglG YP_002987030.1 1615397 D 579405 CDS YP_002987031.1 242238850 8087969 1616486..1617880 1 NC_012880.1 PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0662 6-phospho-beta-glucosidase; glycoside hydrolase family 1 1617880 8087969 Dd703_1407 Dickeya dadantii Ech703 glycoside hydrolase family 1 YP_002987031.1 1616486 D 579405 CDS YP_002987032.1 242238851 8087970 1618086..1619210 1 NC_012880.1 PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein; KEGG: yen:YE3022 hypothetical protein; cupin 1619210 8087970 Dd703_1408 Dickeya dadantii Ech703 cupin YP_002987032.1 1618086 D 579405 CDS YP_002987033.1 242238852 8087971 complement(1619300..1620049) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: plu:plu0977 hypothetical protein; short-chain dehydrogenase/reductase SDR 1620049 8087971 Dd703_1409 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002987033.1 1619300 R 579405 CDS YP_002987034.1 242238853 8087972 1620489..1620605 1 NC_012880.1 KEGG: acr:Acry_3004 3-oxoadipate enol-lactonase; 3-oxoadipate enol-lactonase 1620605 8087972 Dd703_1410 Dickeya dadantii Ech703 3-oxoadipate enol-lactonase YP_002987034.1 1620489 D 579405 CDS YP_002987035.1 242238854 8087973 1620669..1620923 1 NC_012880.1 KEGG: eca:ECA2978 hypothetical protein; hypothetical protein 1620923 8087973 Dd703_1411 Dickeya dadantii Ech703 hypothetical protein YP_002987035.1 1620669 D 579405 CDS YP_002987036.1 242238855 8087974 1621006..1621842 1 NC_012880.1 PFAM: beta-lactamase; KEGG: gbe:GbCGDNIH1_1166 metal-dependent hydrolase; beta-lactamase 1621842 8087974 Dd703_1412 Dickeya dadantii Ech703 beta-lactamase YP_002987036.1 1621006 D 579405 CDS YP_002987037.1 242238856 8087975 complement(1621905..1622792) 1 NC_012880.1 PFAM: regulatory protein LysR; KEGG: avi:Avi_0554 transcriptional regulator LysR family; LysR family transcriptional regulator 1622792 8087975 Dd703_1413 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987037.1 1621905 R 579405 CDS YP_002987038.1 242238857 8087976 1623662..1623973 1 NC_012880.1 KEGG: eca:ECA3122 type I restriction enzyme EcoEI R protein; hypothetical protein 1623973 8087976 Dd703_1414 Dickeya dadantii Ech703 hypothetical protein YP_002987038.1 1623662 D 579405 CDS YP_002987039.1 242238858 8087977 1624970..1625578 1 NC_012880.1 KEGG: plu:plu3832 hypothetical protein; hypothetical protein 1625578 8087977 Dd703_1415 Dickeya dadantii Ech703 hypothetical protein YP_002987039.1 1624970 D 579405 CDS YP_002987040.1 242238859 8087978 complement(1625841..1626590) 1 NC_012880.1 involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 1626590 8087978 Dd703_1416 Dickeya dadantii Ech703 polyketide biosynthesis enoyl-CoA hydratase YP_002987040.1 1625841 R 579405 CDS YP_002987041.1 242238860 8087979 complement(1626595..1627383) 1 NC_012880.1 involved in polyketide synthesis; polyketide biosynthesis enoyl-CoA hydratase 1627383 8087979 Dd703_1417 Dickeya dadantii Ech703 polyketide biosynthesis enoyl-CoA hydratase YP_002987041.1 1626595 R 579405 CDS YP_002987042.1 242238861 8087980 complement(1627374..1628636) 1 NC_012880.1 PFAM: hydroxymethylglutaryl-coenzyme A synthase domain protein; hydroxymethylglutaryl-coenzyme A synthase domain; KEGG: bte:BTH_II1670 polyketide biosynthesis protein; hydroxymethylglutaryl-CoA synthase 1628636 8087980 Dd703_1418 Dickeya dadantii Ech703 hydroxymethylglutaryl-CoA synthase YP_002987042.1 1627374 R 579405 CDS YP_002987043.1 242238862 8087981 complement(1628679..1629935) 1 NC_012880.1 involved in polyketide production; polyketide beta-ketoacyl:acyl carrier protein synthase 1629935 8087981 Dd703_1419 Dickeya dadantii Ech703 polyketide beta-ketoacyl:acyl carrier protein synthase YP_002987043.1 1628679 R 579405 CDS YP_002987044.1 242238863 8087982 complement(1630002..1630253) 1 NC_012880.1 KEGG: bmn:BMA10247_A1115 acyl carrier protein; acyl carrier protein 1630253 8087982 Dd703_1420 Dickeya dadantii Ech703 acyl carrier protein YP_002987044.1 1630002 R 579405 CDS YP_002987045.1 242238864 8087983 1631306..1642741 1 NC_012880.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; methyltransferase FkbM family; PFAM: beta-ketoacyl synthase ; enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; KEGG: scl:sce3188 polyketide synthase; FkbH-like protein 1642741 8087983 Dd703_1421 Dickeya dadantii Ech703 FkbH-like protein YP_002987045.1 1631306 D 579405 CDS YP_002987046.1 242238865 8087984 1642802..1644106 1 NC_012880.1 PFAM: flavin-containing monooxygenase FMO; KEGG: bte:BTH_II2346 monooxygenase flavin-binding family protein; flavin-containing monooxygenase 1644106 8087984 Dd703_1422 Dickeya dadantii Ech703 flavin-containing monooxygenase YP_002987046.1 1642802 D 579405 CDS YP_002987047.1 242238866 8087985 1644110..1651615 1 NC_012880.1 PFAM: beta-ketoacyl synthase ; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17190 polyketide synthase of type I; 6-methylsalicylic acid synthase 1651615 8087985 Dd703_1423 Dickeya dadantii Ech703 6-methylsalicylic acid synthase YP_002987047.1 1644110 D 579405 CDS YP_002987048.1 242238867 8087986 1651612..1652745 1 NC_012880.1 PFAM: Luciferase-like monooxygenase; KEGG: mxa:MXAN_3937 luciferase-like monooxygenase family protein; luciferase-like monooxygenase 1652745 8087986 Dd703_1424 Dickeya dadantii Ech703 luciferase-like monooxygenase YP_002987048.1 1651612 D 579405 CDS YP_002987049.1 242238868 8087987 1652738..1673368 1 NC_012880.1 PFAM: KR domain protein; beta-ketoacyl synthase ; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17180 polyketide synthase of type I; KR domain-containing protein 1673368 8087987 Dd703_1425 Dickeya dadantii Ech703 KR domain-containing protein YP_002987049.1 1652738 D 579405 CDS YP_002987050.1 242238869 8087988 1673415..1673684 1 NC_012880.1 KEGG: bsu:BSU17180 polyketide synthase of type I; polyketide synthase of type I 1673684 8087988 Dd703_1426 Dickeya dadantii Ech703 polyketide synthase of type I YP_002987050.1 1673415 D 579405 CDS YP_002987051.1 242238870 8087989 1673709..1674872 1 NC_012880.1 KEGG: nmu:Nmul_A0140 hypothetical protein; hypothetical protein 1674872 8087989 Dd703_1427 Dickeya dadantii Ech703 hypothetical protein YP_002987051.1 1673709 D 579405 CDS YP_002987052.1 242238871 8088152 1674875..1675234 1 NC_012880.1 hypothetical protein 1675234 8088152 Dd703_1428 Dickeya dadantii Ech703 hypothetical protein YP_002987052.1 1674875 D 579405 CDS YP_002987053.1 242238872 8088153 1675427..1682518 1 NC_012880.1 PFAM: beta-ketoacyl synthase ; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_3933 mixed type I polyketide synthase - peptide synthetase; 6-deoxyerythronolide-B synthase 1682518 8088153 Dd703_1429 Dickeya dadantii Ech703 6-deoxyerythronolide-B synthase YP_002987053.1 1675427 D 579405 CDS YP_002987054.1 242238873 8088154 1682511..1699349 1 NC_012880.1 PFAM: KR domain protein; beta-ketoacyl synthase ; methyltransferase type 11; methyltransferase type 12; short-chain dehydrogenase/reductase SDR; condensation domain protein; thioesterase; phosphopantetheine-binding; KEGG: bsu:BSU17200 polyketide synthase; KR domain-containing protein 1699349 8088154 Dd703_1430 Dickeya dadantii Ech703 KR domain-containing protein YP_002987054.1 1682511 D 579405 CDS YP_002987055.1 242238874 8088155 1699492..1700319 1 NC_012880.1 hypothetical protein 1700319 8088155 Dd703_1431 Dickeya dadantii Ech703 hypothetical protein YP_002987055.1 1699492 D 579405 CDS YP_002987056.1 242238875 8088156 1700364..1701809 1 NC_012880.1 TIGRFAM: PfaD family protein; CRISPR-associated protein DxTHG motif; KEGG: bsu:BSU17120 involved in polyketide synthesis; PfaD family protein 1701809 8088156 Dd703_1432 Dickeya dadantii Ech703 PfaD family protein YP_002987056.1 1700364 D 579405 CDS YP_002987057.1 242238876 8088157 1701980..1703851 1 NC_012880.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: gur:Gura_3105 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1703851 8088157 Dd703_1433 Dickeya dadantii Ech703 malonyl CoA-acyl carrier protein transacylase YP_002987057.1 1701980 D 579405 CDS YP_002987058.1 242238877 8088158 1703921..1705054 1 NC_012880.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: bpd:BURPS668_A1475 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1705054 8088158 Dd703_1434 Dickeya dadantii Ech703 malonyl CoA-acyl carrier protein transacylase YP_002987058.1 1703921 D 579405 CDS YP_002987059.1 242238878 8088159 1705300..1705527 1 NC_012880.1 KEGG: spe:Spro_2323 PTS system, beta-glucoside-specific IIABC subunit; hypothetical protein 1705527 8088159 Dd703_1435 Dickeya dadantii Ech703 hypothetical protein YP_002987059.1 1705300 D 579405 CDS YP_002987060.1 242238879 8088160 1705521..1705721 1 NC_012880.1 hypothetical protein 1705721 8088160 Dd703_1436 Dickeya dadantii Ech703 hypothetical protein YP_002987060.1 1705521 D 579405 CDS YP_002987061.1 242238880 8088163 1706135..1706284 1 NC_012880.1 hypothetical protein 1706284 8088163 Dd703_1438 Dickeya dadantii Ech703 hypothetical protein YP_002987061.1 1706135 D 579405 CDS YP_002987062.1 242238881 8088164 complement(1706347..1707252) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4427 LysR family transcriptional regulator; LysR family transcriptional regulator 1707252 8088164 Dd703_1439 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987062.1 1706347 R 579405 CDS YP_002987063.1 242238882 8088165 1707402..1708946 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4426 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1708946 8088165 Dd703_1440 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987063.1 1707402 D 579405 CDS YP_002987064.1 242238883 8088166 1709234..1710118 1 NC_012880.1 PFAM: dihydrodipicolinate synthetase; KEGG: eca:ECA4425 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 1710118 8088166 Dd703_1441 Dickeya dadantii Ech703 dihydrodipicolinate synthetase YP_002987064.1 1709234 D 579405 CDS YP_002987065.1 242238884 8088167 1710115..1711065 1 NC_012880.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: eca:ECA4424 nucleoside hydrolase protein; ribosylpyrimidine nucleosidase 1711065 8088167 Dd703_1442 Dickeya dadantii Ech703 ribosylpyrimidine nucleosidase YP_002987065.1 1710115 D 579405 CDS YP_002987066.1 242238885 8088168 1711062..1712015 1 NC_012880.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: eca:ECA4423 nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1712015 8088168 Dd703_1443 Dickeya dadantii Ech703 inosine/uridine-preferring nucleoside hydrolase YP_002987066.1 1711062 D 579405 CDS YP_002987067.1 242238886 8088169 1712025..1712996 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4422 ABC transporter permease; binding-protein-dependent transporters inner membrane component 1712996 8088169 Dd703_1444 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987067.1 1712025 D 579405 CDS YP_002987068.1 242238887 8088170 1713000..1713908 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4421 ABC transporter permease; binding-protein-dependent transporters inner membrane component 1713908 8088170 Dd703_1445 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987068.1 1713000 D 579405 CDS YP_002987069.1 242238888 8088171 1713912..1715705 1 NC_012880.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: eca:ECA4420 ABC transporter ATP-binding protein; ABC transporter 1715705 8088171 Dd703_1446 Dickeya dadantii Ech703 ABC transporter YP_002987069.1 1713912 D 579405 CDS YP_002987070.1 242238889 8088172 1716104..1716379 1 NC_012880.1 PFAM: regulatory protein LysR; KEGG: eca:ECA2888 nitrogen assimilation regulatory protein (partial); LysR family transcriptional regulator 1716379 8088172 Dd703_1447 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987070.1 1716104 D 579405 CDS YP_002987071.1 242238890 8088173 complement(1716457..1717878) 1 NC_012880.1 PFAM: amino acid permease-associated region; KEGG: eca:ECA2885 D-alanine/D-serine/glycine permease; amino acid permease-associated protein 1717878 8088173 Dd703_1448 Dickeya dadantii Ech703 amino acid permease-associated protein YP_002987071.1 1716457 R 579405 CDS YP_002987072.1 242238891 8088175 complement(1718559..1718783) 1 NC_012880.1 KEGG: eca:ECA2883 hypothetical protein; hypothetical protein 1718783 8088175 Dd703_1449 Dickeya dadantii Ech703 hypothetical protein YP_002987072.1 1718559 R 579405 CDS YP_002987073.1 242238892 8088176 1719425..1720081 1 NC_012880.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 1720081 8088176 Dd703_1450 Dickeya dadantii Ech703 response regulator YP_002987073.1 1719425 D 579405 CDS YP_002987074.1 242238893 8088177 1720074..1721906 1 NC_012880.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1721906 uvrC 8088177 uvrC Dickeya dadantii Ech703 excinuclease ABC subunit C YP_002987074.1 1720074 D 579405 CDS YP_002987075.1 242238894 8088178 1721967..1722515 1 NC_012880.1 KEGG: spe:Spro_1850 phosphatidylglycerophosphate synthetase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1722515 8088178 Dd703_1452 Dickeya dadantii Ech703 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_002987075.1 1721967 D 579405 CDS YP_002987076.1 242238895 8088180 1723662..1724213 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: cps:CPS_4004 TetR family transcriptional regulator; TetR family transcriptional regulator 1724213 8088180 Dd703_1453 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002987076.1 1723662 D 579405 CDS YP_002987077.1 242238896 8088181 1724244..1724621 1 NC_012880.1 KEGG: scl:sce4419 transcription negative regulator ChrR; anti-ECFsigma factor ChrR 1724621 8088181 Dd703_1454 Dickeya dadantii Ech703 anti-ECFsigma factor ChrR YP_002987077.1 1724244 D 579405 CDS YP_002987078.1 242238897 8088182 1724618..1726558 1 NC_012880.1 PFAM: aconitate hydratase domain protein; KEGG: bph:Bphy_6199 3-isopropylmalate dehydratase; aconitate hydratase domain-containing protein 1726558 8088182 Dd703_1455 Dickeya dadantii Ech703 aconitate hydratase domain-containing protein YP_002987078.1 1724618 D 579405 CDS YP_002987079.1 242238898 8088183 1726817..1727824 1 NC_012880.1 KEGG: psp:PSPPH_4996 hypothetical protein; hypothetical protein 1727824 8088183 Dd703_1456 Dickeya dadantii Ech703 hypothetical protein YP_002987079.1 1726817 D 579405 CDS YP_002987080.1 242238899 8088184 1727878..1729080 1 NC_012880.1 PFAM: aminotransferase class I and II; KEGG: Os01g0871300; hypothetical protein; class I and II aminotransferase 1729080 8088184 Dd703_1457 Dickeya dadantii Ech703 class I and II aminotransferase YP_002987080.1 1727878 D 579405 CDS YP_002987081.1 242238900 8088185 1729077..1730951 1 NC_012880.1 KEGG: bcj:BCAM0066 lipoprotein; lipoprotein 1730951 8088185 Dd703_1458 Dickeya dadantii Ech703 lipoprotein YP_002987081.1 1729077 D 579405 CDS YP_002987082.1 242238901 8088186 1730956..1731570 1 NC_012880.1 PFAM: isochorismatase hydrolase; KEGG: cvi:CV_0540 hypothetical protein; isochorismatase hydrolase 1731570 8088186 Dd703_1459 Dickeya dadantii Ech703 isochorismatase hydrolase YP_002987082.1 1730956 D 579405 CDS YP_002987083.1 242238902 8088187 1731567..1732838 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0628 major facilitator superfamily MFS_1; major facilitator superfamily protein 1732838 8088187 Dd703_1460 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987083.1 1731567 D 579405 CDS YP_002987084.1 242238903 8088188 complement(1733169..1733573) 1 NC_012880.1 PFAM: PilT protein domain protein; KEGG: eca:ECA2850 plasmid protein; PilT protein domain-containing protein 1733573 8088188 Dd703_1461 Dickeya dadantii Ech703 PilT protein domain-containing protein YP_002987084.1 1733169 R 579405 CDS YP_002987085.1 242238904 8088189 complement(1733573..1733803) 1 NC_012880.1 KEGG: eca:ECA2851 plasmid protein; plasmid protein 1733803 8088189 Dd703_1462 Dickeya dadantii Ech703 plasmid protein YP_002987085.1 1733573 R 579405 CDS YP_002987086.1 242238905 8088191 1733976..1734140 1 NC_012880.1 hypothetical protein 1734140 8088191 Dd703_1464 Dickeya dadantii Ech703 hypothetical protein YP_002987086.1 1733976 D 579405 CDS YP_002987087.1 242238906 8088193 complement(1734637..1735500) 1 NC_012880.1 PFAM: aminotransferase class IV; KEGG: eca:ECA3117 D-alanine aminotransferase; D-amino-acid transaminase 1735500 8088193 Dd703_1465 Dickeya dadantii Ech703 D-amino-acid transaminase YP_002987087.1 1734637 R 579405 CDS YP_002987088.1 242238907 8088194 1735871..1737106 1 NC_012880.1 PFAM: aminotransferase class I and II; KEGG: eca:ECA3115 aminotransferase; aminotransferase 1737106 8088194 Dd703_1466 Dickeya dadantii Ech703 aminotransferase YP_002987088.1 1735871 D 579405 CDS YP_002987089.1 242238908 8088195 1737458..1737865 1 NC_012880.1 TIGRFAM: lipoprotein, PulS/OutS family; KEGG: eca:ECA3114 general secretion pathway lipoprotein; lipoprotein, PulS/OutS family 1737865 8088195 Dd703_1467 Dickeya dadantii Ech703 lipoprotein, PulS/OutS family YP_002987089.1 1737458 D 579405 CDS YP_002987090.1 242238909 8088196 complement(1737910..1738539) 1 NC_012880.1 KEGG: eca:ECA3113 general secretion pathway protein; general secretion pathway protein 1738539 8088196 Dd703_1468 Dickeya dadantii Ech703 general secretion pathway protein YP_002987090.1 1737910 R 579405 CDS YP_002987091.1 242238910 8088197 1739717..1740541 1 NC_012880.1 TIGRFAM: general secretion pathway protein C; KEGG: eca:ECA3110 general secretion pathway protein C; general secretion pathway protein C 1740541 8088197 Dd703_1469 Dickeya dadantii Ech703 general secretion pathway protein C YP_002987091.1 1739717 D 579405 CDS YP_002987092.1 242238911 8088198 1740543..1742687 1 NC_012880.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: kpe:KPK_4576 pullulanase secretion envelope protein PulD; general secretion pathway protein D 1742687 8088198 Dd703_1470 Dickeya dadantii Ech703 general secretion pathway protein D YP_002987092.1 1740543 D 579405 CDS YP_002987093.1 242238912 8088199 1742684..1744180 1 NC_012880.1 KEGG: eca:ECA3108 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA; general secretory pathway protein E 1744180 8088199 Dd703_1471 Dickeya dadantii Ech703 general secretory pathway protein E YP_002987093.1 1742684 D 579405 CDS YP_002987094.1 242238913 8088200 1744182..1745408 1 NC_012880.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: eca:ECA3107 general secretion pathway protein F; general secretion pathway protein F 1745408 8088200 Dd703_1472 Dickeya dadantii Ech703 general secretion pathway protein F YP_002987094.1 1744182 D 579405 CDS YP_002987095.1 242238914 8088201 1745443..1745895 1 NC_012880.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G; general secretion pathway protein G 1745895 8088201 Dd703_1473 Dickeya dadantii Ech703 general secretion pathway protein G YP_002987095.1 1745443 D 579405 CDS YP_002987096.1 242238915 8088202 1745895..1746434 1 NC_012880.1 TIGRFAM: general secretion pathway protein H; KEGG: eca:ECA3105 general secretion pathway protein H; general secretion pathway protein H 1746434 8088202 Dd703_1474 Dickeya dadantii Ech703 general secretion pathway protein H YP_002987096.1 1745895 D 579405 CDS YP_002987097.1 242238916 8088203 1746441..1746827 1 NC_012880.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: eca:ECA3104 general secretion pathway protein I; general secretion pathway protein I 1746827 8088203 Dd703_1475 Dickeya dadantii Ech703 general secretion pathway protein I YP_002987097.1 1746441 D 579405 CDS YP_002987098.1 242238917 8088204 1746824..1747537 1 NC_012880.1 TIGRFAM: general secretion pathway protein J; KEGG: eca:ECA3103 general secretion pathway protein J; general secretion pathway protein J 1747537 8088204 Dd703_1476 Dickeya dadantii Ech703 general secretion pathway protein J YP_002987098.1 1746824 D 579405 CDS YP_002987099.1 242238918 8088205 1747534..1748571 1 NC_012880.1 PFAM: general secretion pathway protein K; KEGG: eca:ECA3102 general secretion pathway protein K; general secretion pathway protein K 1748571 8088205 Dd703_1477 Dickeya dadantii Ech703 general secretion pathway protein K YP_002987099.1 1747534 D 579405 CDS YP_002987100.1 242238919 8088206 1748568..1749770 1 NC_012880.1 TIGRFAM: general secretion pathway protein L; PFAM: general secretion pathway L; KEGG: eca:ECA3101 general secretion pathway protein L; general secretion pathway protein L 1749770 8088206 Dd703_1478 Dickeya dadantii Ech703 general secretion pathway protein L YP_002987100.1 1748568 D 579405 CDS YP_002987101.1 242238920 8088207 1749767..1750255 1 NC_012880.1 PFAM: general secretion pathway M protein; KEGG: eca:ECA3100 general secretion pathway protein M; general secretion pathway M protein 1750255 8088207 Dd703_1479 Dickeya dadantii Ech703 general secretion pathway M protein YP_002987101.1 1749767 D 579405 CDS YP_002987102.1 242238921 8088208 1750332..1751183 1 NC_012880.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: eca:ECA3098 type 4 prepilin-like proteins leader peptide processing enzyme; prepilin peptidase 1751183 8088208 Dd703_1480 Dickeya dadantii Ech703 prepilin peptidase YP_002987102.1 1750332 D 579405 CDS YP_002987103.1 242238922 8088209 1752072..1753136 1 NC_012880.1 PFAM: periplasmic binding protein; KEGG: eca:ECA3096 ABC-transporter periplasmic-binding component; periplasmic binding protein 1753136 8088209 Dd703_1481 Dickeya dadantii Ech703 periplasmic binding protein YP_002987103.1 1752072 D 579405 CDS YP_002987104.1 242238923 8088210 1753133..1754149 1 NC_012880.1 PFAM: transporter permease; KEGG: eca:ECA3095 ABC transporter permease; transporter permease 1754149 8088210 Dd703_1482 Dickeya dadantii Ech703 transporter permease YP_002987104.1 1753133 D 579405 CDS YP_002987105.1 242238924 8088211 1754146..1754913 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3094 ABC transporter ATP-binding protein; ABC transporter 1754913 8088211 Dd703_1483 Dickeya dadantii Ech703 ABC transporter YP_002987105.1 1754146 D 579405 CDS YP_002987106.1 242238925 8088212 1754910..1755653 1 NC_012880.1 KEGG: eca:ECA3093 hypothetical protein; molybdate ABC transporter substrate-binding protein 1755653 8088212 Dd703_1484 Dickeya dadantii Ech703 molybdate ABC transporter substrate-binding protein YP_002987106.1 1754910 D 579405 CDS YP_002987107.1 242238926 8088213 1755890..1756462 1 NC_012880.1 PFAM: protein of unknown function DUF1234; KEGG: eca:ECA3091 hypothetical protein; hypothetical protein 1756462 8088213 Dd703_1485 Dickeya dadantii Ech703 hypothetical protein YP_002987107.1 1755890 D 579405 CDS YP_002987108.1 242238927 8088214 complement(1756765..1757184) 1 NC_012880.1 PFAM: thioesterase superfamily protein; KEGG: plu:plu2625 hypothetical protein; thioesterase superfamily protein 1757184 8088214 Dd703_1486 Dickeya dadantii Ech703 thioesterase superfamily protein YP_002987108.1 1756765 R 579405 CDS YP_002987109.1 242238928 8088215 complement(1757190..1757948) 1 NC_012880.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase 1757948 8088215 Dd703_1487 Dickeya dadantii Ech703 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_002987109.1 1757190 R 579405 CDS YP_002987110.1 242238929 8088216 complement(1757945..1758820) 1 NC_012880.1 PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: spe:Spro_3419 isochorismatase; isochorismatase 1758820 8088216 Dd703_1488 Dickeya dadantii Ech703 isochorismatase YP_002987110.1 1757945 R 579405 CDS YP_002987111.1 242238930 8088217 complement(1758824..1760452) 1 NC_012880.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E 1760452 entE 8088217 entE Dickeya dadantii Ech703 enterobactin synthase subunit E YP_002987111.1 1758824 R 579405 CDS YP_002987112.1 242238931 8088218 complement(1760449..1761636) 1 NC_012880.1 TIGRFAM: isochorismate synthase; PFAM: chorismate binding-like; KEGG: spe:Spro_3421 isochorismate synthase; isochorismate synthase 1761636 8088218 Dd703_1490 Dickeya dadantii Ech703 isochorismate synthase YP_002987112.1 1760449 R 579405 CDS YP_002987113.1 242238932 8088219 complement(1761729..1763882) 1 NC_012880.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cko:CKO_02589 hypothetical protein; TonB-dependent siderophore receptor 1763882 8088219 Dd703_1491 Dickeya dadantii Ech703 TonB-dependent siderophore receptor YP_002987113.1 1761729 R 579405 CDS YP_002987114.1 242238933 8088220 1764199..1765503 1 NC_012880.1 PFAM: esterase; KEGG: yen:YE3622 enterobactin/ferric enterobactin esterase; enterobactin/ferric enterobactin esterase 1765503 8088220 Dd703_1492 Dickeya dadantii Ech703 enterobactin/ferric enterobactin esterase YP_002987114.1 1764199 D 579405 CDS YP_002987115.1 242238934 8088221 1765508..1765729 1 NC_012880.1 PFAM: MbtH domain protein; KEGG: cvi:CV_2232 MbtH-like protein; MbtH domain-containing protein 1765729 8088221 Dd703_1493 Dickeya dadantii Ech703 MbtH domain-containing protein YP_002987115.1 1765508 D 579405 CDS YP_002987116.1 242238935 8088222 1765920..1774460 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: cvi:CV_2233 synthetase CbsF; amino acid adenylation protein 1774460 8088222 Dd703_1494 Dickeya dadantii Ech703 amino acid adenylation protein YP_002987116.1 1765920 D 579405 CDS YP_002987117.1 242238936 8088223 complement(1774657..1775454) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: yen:YE3621 iron-siderophore transporter, ATP-binding component; ABC transporter 1775454 8088223 Dd703_1495 Dickeya dadantii Ech703 ABC transporter YP_002987117.1 1774657 R 579405 CDS YP_002987118.1 242238937 8088224 complement(1775490..1776521) 1 NC_012880.1 PFAM: transporter permease; KEGG: yen:YE3620 iron-enterobactin transporter permease; transporter permease 1776521 8088224 Dd703_1496 Dickeya dadantii Ech703 transporter permease YP_002987118.1 1775490 R 579405 CDS YP_002987119.1 242238938 8088225 complement(1776532..1777578) 1 NC_012880.1 PFAM: transporter permease; KEGG: yen:YE3619 iron-enterobactin transporter membrane protein; transporter permease 1777578 8088225 Dd703_1497 Dickeya dadantii Ech703 transporter permease YP_002987119.1 1776532 R 579405 CDS YP_002987120.1 242238939 8088226 1777813..1779111 1 NC_012880.1 protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS 1779111 8088226 Dd703_1498 Dickeya dadantii Ech703 enterobactin exporter EntS YP_002987120.1 1777813 D 579405 CDS YP_002987121.1 242238940 8088227 complement(1779147..1780202) 1 NC_012880.1 with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 1780202 8088227 Dd703_1499 Dickeya dadantii Ech703 iron-enterobactin transporter periplasmic binding protein YP_002987121.1 1779147 R 579405 CDS YP_002987122.1 242238941 8088228 complement(1780431..1780631) 1 NC_012880.1 hypothetical protein 1780631 8088228 Dd703_1500 Dickeya dadantii Ech703 hypothetical protein YP_002987122.1 1780431 R 579405 CDS YP_002987123.1 242238942 8088229 complement(1781187..1781996) 1 NC_012880.1 TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (class B); KEGG: spe:Spro_1456 5'-nucleotidase; 5'-nucleotidase 1781996 8088229 Dd703_1501 Dickeya dadantii Ech703 5'-nucleotidase YP_002987123.1 1781187 R 579405 CDS YP_002987124.1 242238943 8088232 1783424..1785613 1 NC_012880.1 involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein; ferrichrome outer membrane transporter 1785613 8088232 Dd703_1502 Dickeya dadantii Ech703 ferrichrome outer membrane transporter YP_002987124.1 1783424 D 579405 CDS YP_002987125.1 242238944 8090096 complement(1785662..1786039) 1 NC_012880.1 PFAM: cytochrome b562; KEGG: eca:ECA2222 soluble cytochrome b562; cytochrome b562 1786039 8090096 Dd703_1503 Dickeya dadantii Ech703 cytochrome b562 YP_002987125.1 1785662 R 579405 CDS YP_002987126.1 242238945 8090097 complement(1786595..1788103) 1 NC_012880.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: eca:ECA2762 hypothetical protein; hypothetical protein 1788103 8090097 Dd703_1504 Dickeya dadantii Ech703 hypothetical protein YP_002987126.1 1786595 R 579405 CDS YP_002987127.1 242238946 8090098 1788135..1788290 1 NC_012880.1 hypothetical protein 1788290 8090098 Dd703_1505 Dickeya dadantii Ech703 hypothetical protein YP_002987127.1 1788135 D 579405 CDS YP_002987128.1 242238947 8090099 1788481..1788672 1 NC_012880.1 KEGG: sgl:SG1238 hypothetical protein; hypothetical protein 1788672 8090099 Dd703_1506 Dickeya dadantii Ech703 hypothetical protein YP_002987128.1 1788481 D 579405 CDS YP_002987129.1 242238948 8090100 complement(1788716..1790437) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1683 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1790437 8090100 Dd703_1507 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987129.1 1788716 R 579405 CDS YP_002987130.1 242238949 8090101 1791729..1792079 1 NC_012880.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 1792079 8090101 Dd703_1508 Dickeya dadantii Ech703 transcriptional activator FlhD YP_002987130.1 1791729 D 579405 CDS YP_002987131.1 242238950 8090102 1792079..1792660 1 NC_012880.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 1792660 8090102 Dd703_1509 Dickeya dadantii Ech703 transcriptional activator FlhC YP_002987131.1 1792079 D 579405 CDS YP_002987132.1 242238951 8090103 1792783..1793670 1 NC_012880.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 1793670 8090103 Dd703_1510 Dickeya dadantii Ech703 flagellar motor protein MotA YP_002987132.1 1792783 D 579405 CDS YP_002987133.1 242238952 8090104 1793667..1794800 1 NC_012880.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1794800 motB 8090104 motB Dickeya dadantii Ech703 flagellar motor protein MotB YP_002987133.1 1793667 D 579405 CDS YP_002987134.1 242238953 8090105 1794818..1796863 1 NC_012880.1 chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 1796863 8090105 Dd703_1512 Dickeya dadantii Ech703 chemotaxis protein CheA YP_002987134.1 1794818 D 579405 CDS YP_002987135.1 242238954 8090106 1796900..1797397 1 NC_012880.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: eca:ECA1690 purine-binding chemotaxis protein; purine-binding chemotaxis protein 1797397 8090106 Dd703_1513 Dickeya dadantii Ech703 purine-binding chemotaxis protein YP_002987135.1 1796900 D 579405 CDS YP_002987136.1 242238955 8090107 1797527..1799215 1 NC_012880.1 PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; KEGG: eca:ECA1691 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1799215 8090107 Dd703_1514 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987136.1 1797527 D 579405 CDS YP_002987137.1 242238956 8090108 1799879..1800751 1 NC_012880.1 methylates the MCP; chemotaxis methyltransferase CheR 1800751 8090108 Dd703_1515 Dickeya dadantii Ech703 chemotaxis methyltransferase CheR YP_002987137.1 1799879 D 579405 CDS YP_002987138.1 242238957 8090109 1800751..1801803 1 NC_012880.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1801803 8090109 Dd703_1516 Dickeya dadantii Ech703 chemotaxis-specific methylesterase YP_002987138.1 1800751 D 579405 CDS YP_002987139.1 242238958 8090110 1801839..1802228 1 NC_012880.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA1694 chemotaxis regulatory protein CheY; response regulator receiver protein 1802228 8090110 Dd703_1517 Dickeya dadantii Ech703 response regulator receiver protein YP_002987139.1 1801839 D 579405 CDS YP_002987140.1 242238959 8090111 1802238..1802882 1 NC_012880.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 1802882 8090111 Dd703_1518 Dickeya dadantii Ech703 chemotaxis regulator CheZ YP_002987140.1 1802238 D 579405 CDS YP_002987141.1 242238960 8090112 1803109..1804260 1 NC_012880.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1804260 flhB 8090112 flhB Dickeya dadantii Ech703 flagellar biosynthesis protein FlhB YP_002987141.1 1803109 D 579405 CDS YP_002987142.1 242238961 8090113 1804253..1806349 1 NC_012880.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1806349 flhA 8090113 flhA Dickeya dadantii Ech703 flagellar biosynthesis protein FlhA YP_002987142.1 1804253 D 579405 CDS YP_002987143.1 242238962 8090114 1806346..1806753 1 NC_012880.1 PFAM: flagellar FlhE family protein; KEGG: efe:EFER_1196 hypothetical protein; flagellar FlhE family protein 1806753 8090114 Dd703_1521 Dickeya dadantii Ech703 flagellar FlhE family protein YP_002987143.1 1806346 D 579405 CDS YP_002987144.1 242238963 8090115 complement(1806805..1807239) 1 NC_012880.1 PFAM: FlgN family protein; KEGG: eca:ECA1699 flagella synthesis protein; FlgN family protein 1807239 8090115 Dd703_1522 Dickeya dadantii Ech703 FlgN family protein YP_002987144.1 1806805 R 579405 CDS YP_002987145.1 242238964 8090116 complement(1807266..1807559) 1 NC_012880.1 PFAM: anti-sigma-28 factor FlgM family protein; KEGG: eca:ECA1700 anti-sigma28 factor FlgM; anti-sigma-28 factor FlgM 1807559 8090116 Dd703_1523 Dickeya dadantii Ech703 anti-sigma-28 factor FlgM YP_002987145.1 1807266 R 579405 CDS YP_002987146.1 242238965 8090117 complement(1807640..1808344) 1 NC_012880.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: yen:YE2561 flagellar basal body P-ring biosynthesis protein FlgA; flagella basal body P-ring formation protein FlgA 1808344 8090117 Dd703_1524 Dickeya dadantii Ech703 flagella basal body P-ring formation protein FlgA YP_002987146.1 1807640 R 579405 CDS YP_002987147.1 242238966 8090118 1808554..1808967 1 NC_012880.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: eca:ECA1702 flagellar basal body rod protein FlgB; flagellar basal-body rod protein FlgB 1808967 8090118 Dd703_1525 Dickeya dadantii Ech703 flagellar basal-body rod protein FlgB YP_002987147.1 1808554 D 579405 CDS YP_002987148.1 242238967 8090119 1808973..1809377 1 NC_012880.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ypy:YPK_2424 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 1809377 8090119 Dd703_1526 Dickeya dadantii Ech703 flagellar basal-body rod protein FlgC YP_002987148.1 1808973 D 579405 CDS YP_002987149.1 242238968 8090120 1809399..1810076 1 NC_012880.1 PFAM: flagellar hook capping protein; KEGG: eta:ETA_20390 flagellar biosynthesis, initiation of hook assembly; flagellar hook capping protein 1810076 8090120 Dd703_1527 Dickeya dadantii Ech703 flagellar hook capping protein YP_002987149.1 1809399 D 579405 CDS YP_002987150.1 242238969 8090121 1810149..1811348 1 NC_012880.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1811348 flgE 8090121 flgE Dickeya dadantii Ech703 flagellar hook protein FlgE YP_002987150.1 1810149 D 579405 CDS YP_002987151.1 242238970 8090122 1811370..1812125 1 NC_012880.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: spe:Spro_2966 flagellar basal body rod protein FlgF; flagellar basal body rod protein 1812125 8090122 Dd703_1529 Dickeya dadantii Ech703 flagellar basal body rod protein YP_002987151.1 1811370 D 579405 CDS YP_002987152.1 242238971 8090123 1812147..1812929 1 NC_012880.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: spe:Spro_2965 flagellar basal body rod protein FlgG; flagellar basal-body rod protein FlgG 1812929 8090123 Dd703_1530 Dickeya dadantii Ech703 flagellar basal-body rod protein FlgG YP_002987152.1 1812147 D 579405 CDS YP_002987153.1 242238972 8090124 1813002..1813688 1 NC_012880.1 PFAM: flagellar L-ring protein; KEGG: eca:ECA1708 flagellar basal body L-ring protein; flagellar L-ring protein 1813688 8090124 Dd703_1531 Dickeya dadantii Ech703 flagellar L-ring protein YP_002987153.1 1813002 D 579405 CDS YP_002987154.1 242238973 8090125 1813699..1814808 1 NC_012880.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1814808 flgI 8090125 flgI Dickeya dadantii Ech703 flagellar basal body P-ring protein YP_002987154.1 1813699 D 579405 CDS YP_002987155.1 242238974 8090126 1814809..1815786 1 NC_012880.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 1815786 flgJ 8090126 flgJ Dickeya dadantii Ech703 flagellar rod assembly protein/muramidase FlgJ YP_002987155.1 1814809 D 579405 CDS YP_002987156.1 242238975 8090127 1815887..1817542 1 NC_012880.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: yen:YE2551 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 1817542 8090127 Dd703_1534 Dickeya dadantii Ech703 flagellar hook-associated protein FlgK YP_002987156.1 1815887 D 579405 CDS YP_002987157.1 242238976 8090128 1817606..1818544 1 NC_012880.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: yen:YE2550 flagellar hook-associated protein FlgL; flagellar hook-associated protein 3 1818544 8090128 Dd703_1535 Dickeya dadantii Ech703 flagellar hook-associated protein 3 YP_002987157.1 1817606 D 579405 CDS YP_002987158.1 242238977 8090129 1818823..1820322 1 NC_012880.1 PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: eck:EC55989_2145 flagellar hook-associated protein 2 (HAP2) (filament cap protein) (flagellar cap protein); flagellar hook-associated 2 domain-containing protein 1820322 8090129 Dd703_1536 Dickeya dadantii Ech703 flagellar hook-associated 2 domain-containing protein YP_002987158.1 1818823 D 579405 CDS YP_002987159.1 242238978 8090130 1820344..1820751 1 NC_012880.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: stt:t0916 flagellar protein FliS; flagellar protein FliS 1820751 8090130 Dd703_1537 Dickeya dadantii Ech703 flagellar protein FliS YP_002987159.1 1820344 D 579405 CDS YP_002987160.1 242238979 8090131 1820870..1821244 1 NC_012880.1 PFAM: flagellar export chaperone; KEGG: ypi:YpsIP31758_2285 flagellar biosynthesis protein FliT; flagellar export chaperone 1821244 8090131 Dd703_1538 Dickeya dadantii Ech703 flagellar export chaperone YP_002987160.1 1820870 D 579405 CDS YP_002987161.1 242238980 8090132 complement(1821472..1821807) 1 NC_012880.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: eca:ECA1727 flagellar hook-basal body protein FliE; flagellar hook-basal body complex subunit FliE 1821807 8090132 Dd703_1539 Dickeya dadantii Ech703 flagellar hook-basal body complex subunit FliE YP_002987161.1 1821472 R 579405 CDS YP_002987162.1 242238981 8090133 1822054..1823763 1 NC_012880.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1823763 fliF 8090133 fliF Dickeya dadantii Ech703 flagellar MS-ring protein YP_002987162.1 1822054 D 579405 CDS YP_002987163.1 242238982 8090134 1823760..1824752 1 NC_012880.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1824752 fliG 8090134 fliG Dickeya dadantii Ech703 flagellar motor switch protein G YP_002987163.1 1823760 D 579405 CDS YP_002987164.1 242238983 8090135 1824745..1825440 1 NC_012880.1 PFAM: flagellar assembly protein FliH; KEGG: eca:ECA1724 flagellar assembly protein H; flagellar assembly protein FliH 1825440 8090135 Dd703_1542 Dickeya dadantii Ech703 flagellar assembly protein FliH YP_002987164.1 1824745 D 579405 CDS YP_002987165.1 242238984 8090136 1825440..1826804 1 NC_012880.1 KEGG: eca:ECA1723 flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; SMART: ATPase AAA; FliI/YscN family ATPase 1826804 8090136 Dd703_1543 Dickeya dadantii Ech703 FliI/YscN family ATPase YP_002987165.1 1825440 D 579405 CDS YP_002987166.1 242238985 8090137 1826894..1827340 1 NC_012880.1 TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: eca:ECA1722 flagellar biosynthesis chaperone; flagellar export protein FliJ 1827340 8090137 Dd703_1544 Dickeya dadantii Ech703 flagellar export protein FliJ YP_002987166.1 1826894 D 579405 CDS YP_002987167.1 242238986 8090138 1827337..1828908 1 NC_012880.1 PFAM: flagellar hook-length control protein; KEGG: yen:YE2542 flagellar hook-length control protein FliK; flagellar hook-length control protein 1828908 8090138 Dd703_1545 Dickeya dadantii Ech703 flagellar hook-length control protein YP_002987167.1 1827337 D 579405 CDS YP_002987168.1 242238987 8090139 1829045..1829524 1 NC_012880.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1829524 fliL 8090139 fliL Dickeya dadantii Ech703 flagellar basal body-associated protein FliL YP_002987168.1 1829045 D 579405 CDS YP_002987169.1 242238988 8090140 1829530..1830561 1 NC_012880.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1830561 fliM 8090140 fliM Dickeya dadantii Ech703 flagellar motor switch protein FliM YP_002987169.1 1829530 D 579405 CDS YP_002987170.1 242238989 8090141 1830554..1830964 1 NC_012880.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: eca:ECA1718 flagellar motor switch protein FliN; flagellar motor switch protein FliN 1830964 8090141 Dd703_1548 Dickeya dadantii Ech703 flagellar motor switch protein FliN YP_002987170.1 1830554 D 579405 CDS YP_002987171.1 242238990 8090142 1830970..1831389 1 NC_012880.1 PFAM: flagellar biosynthesis protein FliO; KEGG: eca:ECA1717 flagellar protein; flagellar biosynthesis protein FliO 1831389 8090142 Dd703_1549 Dickeya dadantii Ech703 flagellar biosynthesis protein FliO YP_002987171.1 1830970 D 579405 CDS YP_002987172.1 242238991 8090143 1831386..1832150 1 NC_012880.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: eca:ECA1716 flagellar biosynthesis protein FliP; flagellar biosynthetic protein FliP 1832150 8090143 Dd703_1550 Dickeya dadantii Ech703 flagellar biosynthetic protein FliP YP_002987172.1 1831386 D 579405 CDS YP_002987173.1 242238992 8090144 1832181..1832450 1 NC_012880.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: yen:YE2548 flagellar biosynthesis protein FliQ; flagellar biosynthetic protein FliQ 1832450 8090144 Dd703_1551 Dickeya dadantii Ech703 flagellar biosynthetic protein FliQ YP_002987173.1 1832181 D 579405 CDS YP_002987174.1 242238993 8090146 complement(1833227..1833529) 1 NC_012880.1 hypothetical protein 1833529 8090146 Dd703_1553 Dickeya dadantii Ech703 hypothetical protein YP_002987174.1 1833227 R 579405 CDS YP_002987175.1 242238994 8090147 1833566..1834705 1 NC_012880.1 PFAM: flagellin domain protein; KEGG: rme:Rmet_5252 flagellin; flagellin domain-containing protein 1834705 8090147 Dd703_1554 Dickeya dadantii Ech703 flagellin domain-containing protein YP_002987175.1 1833566 D 579405 CDS YP_002987176.1 242238995 8090148 1835260..1838826 1 NC_012880.1 PFAM: glycosyl transferase family 2; KEGG: xcb:XC_2258 O-antigen biosynthesis protein; family 2 glycosyl transferase 1838826 8090148 Dd703_1555 Dickeya dadantii Ech703 family 2 glycosyl transferase YP_002987176.1 1835260 D 579405 CDS YP_002987177.1 242238996 8090149 1838952..1840103 1 NC_012880.1 KEGG: bcj:BCAL3235 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase 1840103 8090149 Dd703_1556 Dickeya dadantii Ech703 UDP-galactopyranose mutase YP_002987177.1 1838952 D 579405 CDS YP_002987178.1 242238997 8090150 1840166..1841125 1 NC_012880.1 KEGG: bmj:BMULJ_02294 hypothetical protein; hypothetical protein 1841125 8090150 Dd703_1557 Dickeya dadantii Ech703 hypothetical protein YP_002987178.1 1840166 D 579405 CDS YP_002987179.1 242238998 8090151 1841248..1841970 1 NC_012880.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 1841970 fliA 8090151 fliA Dickeya dadantii Ech703 flagellar biosynthesis sigma factor YP_002987179.1 1841248 D 579405 CDS YP_002987180.1 242238999 8090152 1842022..1842534 1 NC_012880.1 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ 1842534 8090152 Dd703_1559 Dickeya dadantii Ech703 flagella biosynthesis protein FliZ YP_002987180.1 1842022 D 579405 CDS YP_002987181.1 242239000 8090153 1843042..1843830 1 NC_012880.1 PFAM: PhoH family protein; KEGG: eca:ECA1741 hypothetical protein; hypothetical protein 1843830 8090153 Dd703_1560 Dickeya dadantii Ech703 hypothetical protein YP_002987181.1 1843042 D 579405 CDS YP_002987182.1 242239001 8090154 complement(1843885..1845486) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: esa:ESA_pESA3p05527 hypothetical protein; methyl-accepting chemotaxis sensory transducer 1845486 8090154 Dd703_1561 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987182.1 1843885 R 579405 CDS YP_002987183.1 242239002 8090156 complement(1846617..1847255) 1 NC_012880.1 PFAM: ribose/galactose isomerase; KEGG: eca:ECA1742 hypothetical protein; hypothetical protein 1847255 8090156 Dd703_1562 Dickeya dadantii Ech703 hypothetical protein YP_002987183.1 1846617 R 579405 CDS YP_002987184.1 242239003 8090157 complement(1847528..1848046) 1 NC_012880.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1848046 8090157 Dd703_1563 Dickeya dadantii Ech703 3-hydroxydecanoyl-ACP dehydratase YP_002987184.1 1847528 R 579405 CDS YP_002987185.1 242239004 8090158 complement(1848157..1849884) 1 NC_012880.1 PFAM: peptidase S16; KEGG: eca:ECA1749 hypothetical protein; peptidase S16 1849884 8090158 Dd703_1564 Dickeya dadantii Ech703 peptidase S16 YP_002987185.1 1848157 R 579405 CDS YP_002987186.1 242239005 8090159 1850096..1850557 1 NC_012880.1 PFAM: protein of unknown function DUF1047; KEGG: eca:ECA1750 hypothetical protein; hypothetical protein 1850557 8090159 Dd703_1565 Dickeya dadantii Ech703 hypothetical protein YP_002987186.1 1850096 D 579405 CDS YP_002987187.1 242239006 8090160 complement(1850684..1850869) 1 NC_012880.1 KEGG: eca:ECA1771 hypothetical protein; hypothetical protein 1850869 8090160 Dd703_1566 Dickeya dadantii Ech703 hypothetical protein YP_002987187.1 1850684 R 579405 CDS YP_002987188.1 242239007 8090161 1851406..1851675 1 NC_012880.1 KEGG: eca:ECA1773 hypothetical protein; hypothetical protein 1851675 8090161 Dd703_1567 Dickeya dadantii Ech703 hypothetical protein YP_002987188.1 1851406 D 579405 CDS YP_002987189.1 242239008 8090162 1852295..1852504 1 NC_012880.1 hypothetical protein 1852504 8090162 Dd703_1568 Dickeya dadantii Ech703 hypothetical protein YP_002987189.1 1852295 D 579405 CDS YP_002987190.1 242239009 8090163 1852574..1854238 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1774 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1854238 8090163 Dd703_1569 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987190.1 1852574 D 579405 CDS YP_002987191.1 242239010 8090164 1855044..1856612 1 NC_012880.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1856612 mdoG 8090164 mdoG Dickeya dadantii Ech703 glucan biosynthesis protein G YP_002987191.1 1855044 D 579405 CDS YP_002987192.1 242239011 8090165 1856605..1859154 1 NC_012880.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 1859154 8090165 Dd703_1571 Dickeya dadantii Ech703 glucosyltransferase MdoH YP_002987192.1 1856605 D 579405 CDS YP_002987193.1 242239012 8090166 complement(1859332..1860252) 1 NC_012880.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: eca:ECA1779 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1860252 8090166 Dd703_1572 Dickeya dadantii Ech703 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_002987193.1 1859332 R 579405 CDS YP_002987194.1 242239013 8090167 complement(1860481..1861578) 1 NC_012880.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eca:ECA1780 NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase 1861578 8090167 Dd703_1573 Dickeya dadantii Ech703 NADH:flavin oxidoreductase YP_002987194.1 1860481 R 579405 CDS YP_002987195.1 242239014 8090168 1861773..1862831 1 NC_012880.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: eca:ECA1781 hypothetical protein; rhodanese 1862831 8090168 Dd703_1574 Dickeya dadantii Ech703 rhodanese YP_002987195.1 1861773 D 579405 CDS YP_002987196.1 242239015 8090169 complement(1863144..1863398) 1 NC_012880.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS 1863398 bssS 8090169 bssS Dickeya dadantii Ech703 biofilm formation regulatory protein BssS YP_002987196.1 1863144 R 579405 CDS YP_002987197.1 242239016 8090170 complement(1863711..1863953) 1 NC_012880.1 PFAM: DinI family protein; KEGG: esa:ESA_02287 hypothetical protein; DinI family protein 1863953 8090170 Dd703_1576 Dickeya dadantii Ech703 DinI family protein YP_002987197.1 1863711 R 579405 CDS YP_002987198.1 242239017 8090171 complement(1864161..1865210) 1 NC_012880.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1865210 8090171 Dd703_1577 Dickeya dadantii Ech703 dihydroorotase YP_002987198.1 1864161 R 579405 CDS YP_002987199.1 242239018 8090172 1865386..1865688 1 NC_012880.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: eca:ECA1788 hypothetical protein; antibiotic biosynthesis monooxygenase 1865688 8090172 Dd703_1578 Dickeya dadantii Ech703 antibiotic biosynthesis monooxygenase YP_002987199.1 1865386 D 579405 CDS YP_002987200.1 242239019 8090173 complement(1865765..1868947) 1 NC_012880.1 KEGG: yen:YE1627 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family 1868947 8090173 Dd703_1579 Dickeya dadantii Ech703 ribonuclease, Rne/Rng family YP_002987200.1 1865765 R 579405 CDS YP_002987201.1 242239020 8090174 1869527..1870486 1 NC_012880.1 KEGG: eca:ECA1790 23S rRNA pseudouridylate synthase C; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 1870486 8090174 Dd703_1580 Dickeya dadantii Ech703 pseudouridine synthase YP_002987201.1 1869527 D 579405 CDS YP_002987202.1 242239021 8090175 complement(1870527..1871114) 1 NC_012880.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: eca:ECA1791 Maf-like protein; maf protein 1871114 8090175 Dd703_1581 Dickeya dadantii Ech703 maf protein YP_002987202.1 1870527 R 579405 CDS YP_002987203.1 242239022 8090176 1871253..1871774 1 NC_012880.1 PFAM: protein of unknown function DUF177; KEGG: eca:ECA1792 hypothetical protein; hypothetical protein 1871774 8090176 Dd703_1582 Dickeya dadantii Ech703 hypothetical protein YP_002987203.1 1871253 D 579405 CDS YP_002987204.1 242239023 8090177 1871791..1871961 1 NC_012880.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1871961 rpmF 8090177 rpmF Dickeya dadantii Ech703 50S ribosomal protein L32 YP_002987204.1 1871791 D 579405 CDS YP_002987205.1 242239024 8090178 1871989..1873035 1 NC_012880.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1873035 8090178 Dd703_1584 Dickeya dadantii Ech703 glycerol-3-phosphate acyltransferase PlsX YP_002987205.1 1871989 D 579405 CDS YP_002987206.1 242239025 8090179 1873042..1873992 1 NC_012880.1 KEGG: eca:ECA1795 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; hydroxymethylglutaryl-coenzyme A synthase domain; 3-oxoacyl-ACP synthase 1873992 8090179 Dd703_1585 Dickeya dadantii Ech703 3-oxoacyl-ACP synthase YP_002987206.1 1873042 D 579405 CDS YP_002987207.1 242239026 8090180 1874012..1874941 1 NC_012880.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: eca:ECA1796 acyl carrier protein S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 1874941 8090180 Dd703_1586 Dickeya dadantii Ech703 malonyl CoA-acyl carrier protein transacylase YP_002987207.1 1874012 D 579405 CDS YP_002987208.1 242239027 8090181 1874956..1875690 1 NC_012880.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA1797 3-ketoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 1875690 8090181 Dd703_1587 Dickeya dadantii Ech703 3-oxoacyl-ACP reductase YP_002987208.1 1874956 D 579405 CDS YP_002987209.1 242239028 8090182 1875847..1876083 1 NC_012880.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1876083 acpP 8090182 acpP Dickeya dadantii Ech703 acyl carrier protein YP_002987209.1 1875847 D 579405 CDS YP_002987210.1 242239029 8090183 1876168..1877409 1 NC_012880.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1877409 8090183 Dd703_1589 Dickeya dadantii Ech703 3-oxoacyl-(acyl carrier protein) synthase II YP_002987210.1 1876168 D 579405 CDS YP_002987211.1 242239030 8090184 1877537..1878340 1 NC_012880.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 1878340 8090184 Dd703_1590 Dickeya dadantii Ech703 4-amino-4-deoxychorismate lyase YP_002987211.1 1877537 D 579405 CDS YP_002987212.1 242239031 8090185 1878347..1879378 1 NC_012880.1 PFAM: aminodeoxychorismate lyase; KEGG: eca:ECA1801 aminodeoxychorismate lyase; aminodeoxychorismate lyase 1879378 8090185 Dd703_1591 Dickeya dadantii Ech703 aminodeoxychorismate lyase YP_002987212.1 1878347 D 579405 CDS YP_002987213.1 242239032 8090186 1879368..1880021 1 NC_012880.1 KEGG: ypi:YpsIP31758_1583 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 1880021 8090186 Dd703_1592 Dickeya dadantii Ech703 thymidylate kinase YP_002987213.1 1879368 D 579405 CDS YP_002987214.1 242239033 8090187 1880021..1881031 1 NC_012880.1 KEGG: eca:ECA1803 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III delta prime subunit; PFAM: DNA polymerase III subunit delta; DNA polymerase III subunit delta' 1881031 8090187 Dd703_1593 Dickeya dadantii Ech703 DNA polymerase III subunit delta' YP_002987214.1 1880021 D 579405 CDS YP_002987215.1 242239034 8090188 1881047..1881844 1 NC_012880.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: eca:ECA1804 metallodependent hydrolase; metallodependent hydrolase 1881844 8090188 Dd703_1594 Dickeya dadantii Ech703 metallodependent hydrolase YP_002987215.1 1881047 D 579405 CDS YP_002987216.1 242239035 8090189 1882159..1883592 1 NC_012880.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunit IIBC 1883592 8090189 Dd703_1595 Dickeya dadantii Ech703 PTS system glucose-specific transporter subunit IIBC YP_002987216.1 1882159 D 579405 CDS YP_002987217.1 242239036 8090191 1884213..1884776 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A4300 TetR family transcriptional regulator; TetR family transcriptional regulator 1884776 8090191 Dd703_1597 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002987217.1 1884213 D 579405 CDS YP_002987218.1 242239037 8090192 1884830..1885750 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RS05496 oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1885750 8090192 Dd703_1598 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002987218.1 1884830 D 579405 CDS YP_002987219.1 242239038 8090193 1885803..1886561 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pen:PSEEN1512 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1886561 8090193 Dd703_1599 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002987219.1 1885803 D 579405 CDS YP_002987220.1 242239039 8090195 1887141..1888205 1 NC_012880.1 PFAM: malate/L-lactate dehydrogenase; KEGG: lhk:LHK_00733 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase 1888205 8090195 Dd703_1601 Dickeya dadantii Ech703 malate/L-lactate dehydrogenase YP_002987220.1 1887141 D 579405 CDS YP_002987221.1 242239040 8090196 1888309..1888659 1 NC_012880.1 PFAM: histidine triad (HIT) protein; KEGG: eca:ECA1809 purine nucleoside phosphoramidase; purine nucleoside phosphoramidase 1888659 8090196 Dd703_1602 Dickeya dadantii Ech703 purine nucleoside phosphoramidase YP_002987221.1 1888309 D 579405 CDS YP_002987222.1 242239041 8090197 1888662..1889051 1 NC_012880.1 PFAM: protein of unknown function DUF1425; KEGG: eca:ECA1810 lipoprotein; hypothetical protein 1889051 8090197 Dd703_1603 Dickeya dadantii Ech703 hypothetical protein YP_002987222.1 1888662 D 579405 CDS YP_002987223.1 242239042 8090198 1889072..1889665 1 NC_012880.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: eca:ECA1811 lipoprotein; membrane lipoprotein lipid attachment site 1889665 8090198 Dd703_1604 Dickeya dadantii Ech703 membrane lipoprotein lipid attachment site YP_002987223.1 1889072 D 579405 CDS YP_002987224.1 242239043 8090199 1889643..1890506 1 NC_012880.1 PFAM: aminoglycoside phosphotransferase; KEGG: yps:YPTB2450 hypothetical protein; thiamine kinase 1890506 8090199 Dd703_1605 Dickeya dadantii Ech703 thiamine kinase YP_002987224.1 1889643 D 579405 CDS YP_002987225.1 242239044 8090200 1890595..1891641 1 NC_012880.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1891641 8090200 Dd703_1606 Dickeya dadantii Ech703 beta-hexosaminidase YP_002987225.1 1890595 D 579405 CDS YP_002987226.1 242239045 8090201 1891745..1892305 1 NC_012880.1 PFAM: protein of unknown function UPF0227; KEGG: esa:ESA_02236 hypothetical protein; hypothetical protein 1892305 8090201 Dd703_1607 Dickeya dadantii Ech703 hypothetical protein YP_002987226.1 1891745 D 579405 CDS YP_002987227.1 242239046 8090202 1892760..1894067 1 NC_012880.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA1815 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1894067 8090202 Dd703_1608 Dickeya dadantii Ech703 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002987227.1 1892760 D 579405 CDS YP_002987228.1 242239047 8090203 1894395..1894934 1 NC_012880.1 PFAM: 17 kDa surface antigen; KEGG: eca:ECA1816 hypothetical protein; hypothetical protein 1894934 8090203 Dd703_1609 Dickeya dadantii Ech703 hypothetical protein YP_002987228.1 1894395 D 579405 CDS YP_002987229.1 242239048 8090204 complement(1895079..1896149) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: eca:ECA1966 transcriptional repressor; LacI family transcriptional regulator 1896149 8090204 Dd703_1610 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002987229.1 1895079 R 579405 CDS YP_002987230.1 242239049 8090205 1896454..1897755 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1967 hexuronate transporter; major facilitator superfamily protein 1897755 8090205 Dd703_1611 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987230.1 1896454 D 579405 CDS YP_002987231.1 242239050 8090206 1897786..1900152 1 NC_012880.1 PFAM: glycoside hydrolase family 31; KEGG: eca:ECA1968 glycosyl hydrolase; glucan 1,3-alpha-glucosidase 1900152 8090206 Dd703_1612 Dickeya dadantii Ech703 glucan 1,3-alpha-glucosidase YP_002987231.1 1897786 D 579405 CDS YP_002987232.1 242239051 8090207 1900484..1901305 1 NC_012880.1 PFAM: N-acetyltransferase; KEGG: spe:Spro_1338 N-acetyltransferase; N-acetyltransferase 1901305 8090207 Dd703_1613 Dickeya dadantii Ech703 N-acetyltransferase YP_002987232.1 1900484 D 579405 CDS YP_002987233.1 242239052 8090208 complement(1901308..1902657) 1 NC_012880.1 KEGG: eca:ECA1820 chaperone; chaperone 1902657 8090208 Dd703_1614 Dickeya dadantii Ech703 chaperone YP_002987233.1 1901308 R 579405 CDS YP_002987234.1 242239053 8090209 1902928..1903392 1 NC_012880.1 PFAM: protein of unknown function DUF437; KEGG: vha:VIBHAR_06553 hypothetical protein; hypothetical protein 1903392 8090209 Dd703_1615 Dickeya dadantii Ech703 hypothetical protein YP_002987234.1 1902928 D 579405 CDS YP_002987235.1 242239054 8090210 complement(1903415..1904917) 1 NC_012880.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: aha:AHA_3485 EAL domain-containing protein; diguanylate phosphodiesterase 1904917 8090210 Dd703_1616 Dickeya dadantii Ech703 diguanylate phosphodiesterase YP_002987235.1 1903415 R 579405 CDS YP_002987236.1 242239055 8090211 complement(1905000..1908443) 1 NC_012880.1 KEGG: eca:ECA1821 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; helicase; DEAD/DEAH box helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase; transcription-repair coupling factor 1908443 8090211 Dd703_1617 Dickeya dadantii Ech703 transcription-repair coupling factor YP_002987236.1 1905000 R 579405 CDS YP_002987237.1 242239056 8090212 1908580..1909782 1 NC_012880.1 part of the ATP-dependent transporter LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC 1909782 8090212 Dd703_1618 Dickeya dadantii Ech703 outer membrane-specific lipoprotein transporter subunit LolC YP_002987237.1 1908580 D 579405 CDS YP_002987238.1 242239057 8090213 1909775..1910482 1 NC_012880.1 outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit 1910482 lolD 8090213 lolD Dickeya dadantii Ech703 lipoprotein transporter ATP-binding subunit YP_002987238.1 1909775 D 579405 CDS YP_002987239.1 242239058 8090214 1910479..1911726 1 NC_012880.1 part of the ATP-dependent transporter LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 1911726 8090214 Dd703_1620 Dickeya dadantii Ech703 outer membrane-specific lipoprotein transporter subunit LolE YP_002987239.1 1910479 D 579405 CDS YP_002987240.1 242239059 8090215 1911807..1912727 1 NC_012880.1 PFAM: ROK family protein; KEGG: eca:ECA1826 hypothetical protein; ROK family protein 1912727 8090215 Dd703_1621 Dickeya dadantii Ech703 ROK family protein YP_002987240.1 1911807 D 579405 CDS YP_002987241.1 242239060 8090216 1912757..1913587 1 NC_012880.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 1913587 8090216 Dd703_1622 Dickeya dadantii Ech703 NAD-dependent deacetylase YP_002987241.1 1912757 D 579405 CDS YP_002987242.1 242239061 8090217 complement(1913679..1913885) 1 NC_012880.1 KEGG: eca:ECA1828 hypothetical protein; hypothetical protein 1913885 8090217 Dd703_1623 Dickeya dadantii Ech703 hypothetical protein YP_002987242.1 1913679 R 579405 CDS YP_002987243.1 242239062 8090218 1914161..1914340 1 NC_012880.1 hypothetical protein 1914340 8090218 Dd703_1624 Dickeya dadantii Ech703 hypothetical protein YP_002987243.1 1914161 D 579405 CDS YP_002987244.1 242239063 8090219 1914389..1915390 1 NC_012880.1 with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease 1915390 8090219 Dd703_1625 Dickeya dadantii Ech703 vtamin B12-transporter permease YP_002987244.1 1914389 D 579405 CDS YP_002987245.1 242239064 8090220 1915438..1915989 1 NC_012880.1 PFAM: glutathione peroxidase; KEGG: eca:ECA1833 glutathione peroxidase; peroxiredoxin 1915989 8090220 Dd703_1626 Dickeya dadantii Ech703 peroxiredoxin YP_002987245.1 1915438 D 579405 CDS YP_002987246.1 242239065 8090221 1915992..1916762 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1834 vitamin B12-transporter ATPase; ABC transporter 1916762 8090221 Dd703_1627 Dickeya dadantii Ech703 ABC transporter YP_002987246.1 1915992 D 579405 CDS YP_002987247.1 242239066 8090222 1916903..1917370 1 NC_012880.1 PFAM: NLP/P60 protein; KEGG: spe:Spro_2161 NLP/P60 protein; NLP/P60 protein 1917370 8090222 Dd703_1628 Dickeya dadantii Ech703 NLP/P60 protein YP_002987247.1 1916903 D 579405 CDS YP_002987248.1 242239067 8090223 1917410..1918426 1 NC_012880.1 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; lipoate-protein ligase A 1918426 lplA 8090223 lplA Dickeya dadantii Ech703 lipoate-protein ligase A YP_002987248.1 1917410 D 579405 CDS YP_002987249.1 242239068 8090224 1918751..1919497 1 NC_012880.1 PFAM: EAL domain protein; KEGG: eca:ECA1841 hypothetical protein; diguanylate phosphodiesterase 1919497 8090224 Dd703_1630 Dickeya dadantii Ech703 diguanylate phosphodiesterase YP_002987249.1 1918751 D 579405 CDS YP_002987250.1 242239069 8090225 1919676..1921127 1 NC_012880.1 PFAM: protein of unknown function UPF0061; KEGG: spe:Spro_2164 hypothetical protein; hypothetical protein 1921127 8090225 Dd703_1631 Dickeya dadantii Ech703 hypothetical protein YP_002987250.1 1919676 D 579405 CDS YP_002987251.1 242239070 8090226 1921599..1923293 1 NC_012880.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding protein; KEGG: eca:ECA2546 hypothetical protein; hypothetical protein 1923293 8090226 Dd703_1632 Dickeya dadantii Ech703 hypothetical protein YP_002987251.1 1921599 D 579405 CDS YP_002987252.1 242239071 8090227 1923487..1924035 1 NC_012880.1 PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: eca:ECA2545 hypothetical protein; hypothetical protein 1924035 8090227 Dd703_1633 Dickeya dadantii Ech703 hypothetical protein YP_002987252.1 1923487 D 579405 CDS YP_002987253.1 242239072 8090228 1924112..1924747 1 NC_012880.1 PFAM: beta-lactamase; KEGG: eca:ECA2544 metallo-beta-lactamase; beta-lactamase 1924747 8090228 Dd703_1634 Dickeya dadantii Ech703 beta-lactamase YP_002987253.1 1924112 D 579405 CDS YP_002987254.1 242239073 8090229 complement(1924859..1926049) 1 NC_012880.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1926049 8090229 Dd703_1635 Dickeya dadantii Ech703 aromatic amino acid aminotransferase YP_002987254.1 1924859 R 579405 CDS YP_002987255.1 242239074 8090230 complement(1926256..1927356) 1 NC_012880.1 PFAM: porin Gram-negative type; KEGG: eca:ECA2542 outer membrane protein; porin Gram-negative type 1927356 8090230 Dd703_1636 Dickeya dadantii Ech703 porin Gram-negative type YP_002987255.1 1926256 R 579405 CDS YP_002987256.1 242239075 8090231 complement(1927966..1929057) 1 NC_012880.1 PFAM: porin Gram-negative type; KEGG: eca:ECA2542 outer membrane protein; porin Gram-negative type 1929057 8090231 Dd703_1637 Dickeya dadantii Ech703 porin Gram-negative type YP_002987256.1 1927966 R 579405 CDS YP_002987257.1 242239076 8090232 complement(1929353..1930753) 1 NC_012880.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1930753 asnC 8090232 asnC Dickeya dadantii Ech703 asparaginyl-tRNA synthetase YP_002987257.1 1929353 R 579405 CDS YP_002987258.1 242239077 8090233 complement(1931195..1932400) 1 NC_012880.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1932400 8090233 Dd703_1639 Dickeya dadantii Ech703 nicotinate phosphoribosyltransferase YP_002987258.1 1931195 R 579405 CDS YP_002987259.1 242239078 8090234 1932954..1935572 1 NC_012880.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: eca:ECA2539 aminopeptidase N; aminopeptidase N 1935572 pepN 8090234 pepN Dickeya dadantii Ech703 aminopeptidase N YP_002987259.1 1932954 D 579405 CDS YP_002987260.1 242239079 8090235 complement(1935811..1936620) 1 NC_012880.1 part of the ABC type transporter SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit 1936620 ssuB 8090235 ssuB Dickeya dadantii Ech703 aliphatic sulfonates transport ATP-binding subunit YP_002987260.1 1935811 R 579405 CDS YP_002987261.1 242239080 8090236 complement(1936617..1937408) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: esa:ESA_02406 alkanesulfonate transporter permease subunit; binding-protein-dependent transporters inner membrane component 1937408 8090236 Dd703_1642 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987261.1 1936617 R 579405 CDS YP_002987262.1 242239081 8090237 complement(1937419..1938567) 1 NC_012880.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1938567 8090237 Dd703_1643 Dickeya dadantii Ech703 alkanesulfonate monooxygenase YP_002987262.1 1937419 R 579405 CDS YP_002987263.1 242239082 8090238 complement(1938599..1939579) 1 NC_012880.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: spe:Spro_1738 alkanesulfonate transporter substrate-binding subunit; aliphatic sulfonate ABC transporter substrate-binding protein 1939579 8090238 Dd703_1644 Dickeya dadantii Ech703 aliphatic sulfonate ABC transporter substrate-binding protein YP_002987263.1 1938599 R 579405 CDS YP_002987264.1 242239083 8090239 complement(1939608..1940162) 1 NC_012880.1 PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: kpe:KPK_3595 NADPH-dependent FMN reductase; NAD(P)H-dependent FMN reductase 1940162 8090239 Dd703_1645 Dickeya dadantii Ech703 NAD(P)H-dependent FMN reductase YP_002987264.1 1939608 R 579405 CDS YP_002987265.1 242239084 8090240 1940451..1941458 1 NC_012880.1 KEGG: eca:ECA2538 dihydroorotate dehydrogenase 2; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 1941458 8090240 Dd703_1646 Dickeya dadantii Ech703 dihydroorotate dehydrogenase YP_002987265.1 1940451 D 579405 CDS YP_002987266.1 242239085 8090241 1941620..1942180 1 NC_012880.1 PFAM: protein of unknown function DUF1379; KEGG: eca:ECA2537 hypothetical protein; hypothetical protein 1942180 8090241 Dd703_1647 Dickeya dadantii Ech703 hypothetical protein YP_002987266.1 1941620 D 579405 CDS YP_002987267.1 242239086 8090242 complement(1942208..1943311) 1 NC_012880.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: eca:ECA2536 iron-sulfur binding protein; MOSC domain-containing protein 1943311 8090242 Dd703_1648 Dickeya dadantii Ech703 MOSC domain-containing protein YP_002987267.1 1942208 R 579405 CDS YP_002987268.1 242239087 8090243 1943411..1945528 1 NC_012880.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1945528 rlmL 8090243 rlmL Dickeya dadantii Ech703 23S rRNA m(2)G2445 methyltransferase YP_002987268.1 1943411 D 579405 CDS YP_002987269.1 242239088 8090244 1945533..1947446 1 NC_012880.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1947446 8090244 Dd703_1650 Dickeya dadantii Ech703 ABC transporter ATPase YP_002987269.1 1945533 D 579405 CDS YP_002987270.1 242239089 8090245 1947505..1948773 1 NC_012880.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: paraquat-inducible protein A; KEGG: eca:ECA2533 paraquat-inducible protein A; PqiA family integral membrane protein 1948773 8090245 Dd703_1651 Dickeya dadantii Ech703 PqiA family integral membrane protein YP_002987270.1 1947505 D 579405 CDS YP_002987271.1 242239090 8090246 1948760..1950406 1 NC_012880.1 PFAM: hypothetical protein; KEGG: eca:ECA2532 paraquat-inducible protein B; paraquat-inducible protein B 1950406 8090246 Dd703_1652 Dickeya dadantii Ech703 paraquat-inducible protein B YP_002987271.1 1948760 D 579405 CDS YP_002987272.1 242239091 8090247 1950403..1950960 1 NC_012880.1 PFAM: protein of unknown function DUF330; KEGG: eca:ECA2531 lipoprotein; hypothetical protein 1950960 8090247 Dd703_1653 Dickeya dadantii Ech703 hypothetical protein YP_002987272.1 1950403 D 579405 CDS YP_002987273.1 242239092 8090248 1951232..1951399 1 NC_012880.1 PFAM: ribosome modulation factor; KEGG: yps:YPTB1448 ribosome modulation factor; ribosome modulation factor 1951399 8090248 Dd703_1654 Dickeya dadantii Ech703 ribosome modulation factor YP_002987273.1 1951232 D 579405 CDS YP_002987274.1 242239093 8090249 complement(1951467..1952519) 1 NC_012880.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 1952519 8090249 Dd703_1655 Dickeya dadantii Ech703 phospho-2-dehydro-3-deoxyheptonate aldolase YP_002987274.1 1951467 R 579405 CDS YP_002987275.1 242239094 8090250 complement(1952651..1953472) 1 NC_012880.1 PFAM: protein of unknown function DUF299; KEGG: eca:ECA1852 hypothetical protein; hypothetical protein 1953472 8090250 Dd703_1656 Dickeya dadantii Ech703 hypothetical protein YP_002987275.1 1952651 R 579405 CDS YP_002987276.1 242239095 8090251 1953772..1956150 1 NC_012880.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1956150 8090251 Dd703_1657 Dickeya dadantii Ech703 phosphoenolpyruvate synthase YP_002987276.1 1953772 D 579405 CDS YP_002987277.1 242239096 8090252 complement(1956843..1957937) 1 NC_012880.1 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; inner membrane protein 1957937 8090252 Dd703_1658 Dickeya dadantii Ech703 inner membrane protein YP_002987277.1 1956843 R 579405 CDS YP_002987278.1 242239097 8090253 1958276..1961341 1 NC_012880.1 PFAM: FAD linked oxidase; KEGG: eca:ECA1856 FAD-binding oxidase; FAD linked oxidase 1961341 8090253 Dd703_1659 Dickeya dadantii Ech703 FAD linked oxidase YP_002987278.1 1958276 D 579405 CDS YP_002987279.1 242239098 8090254 1961338..1961760 1 NC_012880.1 PFAM: thioesterase superfamily protein; KEGG: eca:ECA1857 hypothetical protein; thioesterase superfamily protein 1961760 8090254 Dd703_1660 Dickeya dadantii Ech703 thioesterase superfamily protein YP_002987279.1 1961338 D 579405 CDS YP_002987280.1 242239099 8090255 complement(1961815..1962216) 1 NC_012880.1 KEGG: eca:ECA1858 hypothetical protein; hypothetical protein 1962216 8090255 Dd703_1661 Dickeya dadantii Ech703 hypothetical protein YP_002987280.1 1961815 R 579405 CDS YP_002987281.1 242239100 8090256 1962681..1963664 1 NC_012880.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eca:ECA1865 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1963664 8090256 Dd703_1662 Dickeya dadantii Ech703 ErfK/YbiS/YcfS/YnhG family protein YP_002987281.1 1962681 D 579405 CDS YP_002987282.1 242239101 8090257 complement(1963797..1964033) 1 NC_012880.1 PFAM: LPP repeat-containing protein; KEGG: eca:ECA1866 major outer membrane lipoprotein; LPP repeat-containing protein 1964033 8090257 Dd703_1663 Dickeya dadantii Ech703 LPP repeat-containing protein YP_002987282.1 1963797 R 579405 CDS YP_002987283.1 242239102 8090258 complement(1964349..1965758) 1 NC_012880.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1965758 8090258 Dd703_1664 Dickeya dadantii Ech703 pyruvate kinase YP_002987283.1 1964349 R 579405 CDS YP_002987284.1 242239103 8090259 1965958..1966059 1 NC_012880.1 hypothetical protein 1966059 8090259 Dd703_1665 Dickeya dadantii Ech703 hypothetical protein YP_002987284.1 1965958 D 579405 CDS YP_002987285.1 242239104 8090260 1966414..1967268 1 NC_012880.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA1869 beta-glucoside operon antiterminator; transcriptional antiterminator BglG 1967268 8090260 Dd703_1666 Dickeya dadantii Ech703 transcriptional antiterminator BglG YP_002987285.1 1966414 D 579405 CDS YP_002987286.1 242239105 8090261 1967527..1969437 1 NC_012880.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system beta-glucoside-specific transporter subunit IIABC 1969437 8090261 Dd703_1667 Dickeya dadantii Ech703 PTS system beta-glucoside-specific transporter subunit IIABC YP_002987286.1 1967527 D 579405 CDS YP_002987287.1 242239106 8090262 1969468..1970865 1 NC_012880.1 PFAM: glycoside hydrolase family 1; KEGG: eca:ECA1871 6-phospho-beta-glucosidase; glycoside hydrolase family 1 1970865 8090262 Dd703_1668 Dickeya dadantii Ech703 glycoside hydrolase family 1 YP_002987287.1 1969468 D 579405 CDS YP_002987288.1 242239107 8090263 1970992..1972590 1 NC_012880.1 PFAM: porin LamB type; KEGG: ecl:EcolC_4274 porin LamB type; LamB type porin 1972590 8090263 Dd703_1669 Dickeya dadantii Ech703 LamB type porin YP_002987288.1 1970992 D 579405 CDS YP_002987289.1 242239108 8090264 1972658..1973845 1 NC_012880.1 PFAM: esterase; glycoside hydrolase family 13 domain protein; KEGG: eca:ECA1873 glycosyl hydrolase exoenzyme; esterase 1973845 8090264 Dd703_1670 Dickeya dadantii Ech703 esterase YP_002987289.1 1972658 D 579405 CDS YP_002987290.1 242239109 8090265 1974676..1975182 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE3194 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 1975182 8090265 Dd703_1671 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002987290.1 1974676 D 579405 CDS YP_002987291.1 242239110 8090266 1975163..1976155 1 NC_012880.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: spe:Spro_0339 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 1976155 8090266 Dd703_1672 Dickeya dadantii Ech703 pyridoxal-5'-phosphate-dependent protein subunit beta YP_002987291.1 1975163 D 579405 CDS YP_002987292.1 242239111 8090267 1976152..1977165 1 NC_012880.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: spe:Spro_0340 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin 1977165 8090267 Dd703_1673 Dickeya dadantii Ech703 ornithine cyclodeaminase/mu-crystallin YP_002987292.1 1976152 D 579405 CDS YP_002987293.1 242239112 8090268 1977229..1979649 1 NC_012880.1 PFAM: peptidase S45 penicillin amidase; KEGG: rme:Rmet_1578 peptidase S45, penicillin amidase; peptidase S45 penicillin amidase 1979649 8090268 Dd703_1674 Dickeya dadantii Ech703 peptidase S45 penicillin amidase YP_002987293.1 1977229 D 579405 CDS YP_002987294.1 242239113 8090269 1979660..1981315 1 NC_012880.1 KEGG: bcm:Bcenmc03_1307 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: ATPase AAA; cyclic peptide transporter 1981315 8090269 Dd703_1675 Dickeya dadantii Ech703 cyclic peptide transporter YP_002987294.1 1979660 D 579405 CDS YP_002987295.1 242239114 8090270 1981397..1984624 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: psb:Psyr_3722 amino acid adenylation; amino acid adenylation protein 1984624 8090270 Dd703_1676 Dickeya dadantii Ech703 amino acid adenylation protein YP_002987295.1 1981397 D 579405 CDS YP_002987296.1 242239115 8090271 1984621..1994490 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: eca:ECA1487 non-ribosomal peptide synthetase; amino acid adenylation protein 1994490 8090271 Dd703_1677 Dickeya dadantii Ech703 amino acid adenylation protein YP_002987296.1 1984621 D 579405 CDS YP_002987297.1 242239116 8090272 1994495..1998676 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase; amino acid adenylation protein 1998676 8090272 Dd703_1678 Dickeya dadantii Ech703 amino acid adenylation protein YP_002987297.1 1994495 D 579405 CDS YP_002987298.1 242239117 8090273 1998669..1999472 1 NC_012880.1 PFAM: thioesterase; KEGG: bpd:BURPS668_A2592 thioesterase; oleoyl-ACP hydrolase 1999472 8090273 Dd703_1679 Dickeya dadantii Ech703 oleoyl-ACP hydrolase YP_002987298.1 1998669 D 579405 CDS YP_002987299.1 242239118 8090276 complement(2000493..2001866) 1 NC_012880.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2001866 8090276 Dd703_1680 Dickeya dadantii Ech703 multidrug efflux protein YP_002987299.1 2000493 R 579405 CDS YP_002987300.1 242239119 8090277 2002288..2002938 1 NC_012880.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2002938 8090277 Dd703_1681 Dickeya dadantii Ech703 riboflavin synthase subunit alpha YP_002987300.1 2002288 D 579405 CDS YP_002987301.1 242239120 8090278 complement(2003086..2004237) 1 NC_012880.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 2004237 8090278 Dd703_1682 Dickeya dadantii Ech703 cyclopropane-fatty-acyl-phospholipid synthase YP_002987301.1 2003086 R 579405 CDS YP_002987302.1 242239121 8090279 complement(2004570..2005595) 1 NC_012880.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR 2005595 8090279 Dd703_1683 Dickeya dadantii Ech703 DNA-binding transcriptional repressor PurR YP_002987302.1 2004570 R 579405 CDS YP_002987303.1 242239122 8090280 complement(2006205..2007275) 1 NC_012880.1 PFAM: NLP/P60 protein; KEGG: ypa:YPA_1730 hypothetical protein; NLP/P60 protein 2007275 8090280 Dd703_1684 Dickeya dadantii Ech703 NLP/P60 protein YP_002987303.1 2006205 R 579405 CDS YP_002987304.1 242239123 8090281 complement(2007401..2007553) 1 NC_012880.1 hypothetical protein 2007553 8090281 Dd703_1685 Dickeya dadantii Ech703 hypothetical protein YP_002987304.1 2007401 R 579405 CDS YP_002987305.1 242239124 8090282 2007596..2007940 1 NC_012880.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: stm:STM1433 hypothetical protein; glutaredoxin-like protein 2007940 8090282 Dd703_1686 Dickeya dadantii Ech703 glutaredoxin-like protein YP_002987305.1 2007596 D 579405 CDS YP_002987306.1 242239125 8090283 complement(2007991..2008668) 1 NC_012880.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2008668 8090283 Dd703_1687 Dickeya dadantii Ech703 ribonuclease T YP_002987306.1 2007991 R 579405 CDS YP_002987307.1 242239126 8090284 complement(2008788..2009195) 1 NC_012880.1 KEGG: spe:Spro_2200 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 2009195 8090284 Dd703_1688 Dickeya dadantii Ech703 lactoylglutathione lyase YP_002987307.1 2008788 R 579405 CDS YP_002987308.1 242239127 8090285 2009827..2010264 1 NC_012880.1 transcription regulator that can both activate or repress expression; transcriptional regulator SlyA 2010264 8090285 Dd703_1689 Dickeya dadantii Ech703 transcriptional regulator SlyA YP_002987308.1 2009827 D 579405 CDS YP_002987309.1 242239128 8090286 complement(2010410..2010877) 1 NC_012880.1 PFAM: 17 kDa surface antigen; KEGG: eca:ECA1932 outer membrane lipoprotein; 17 kDa surface antigen 2010877 8090286 Dd703_1690 Dickeya dadantii Ech703 17 kDa surface antigen YP_002987309.1 2010410 R 579405 CDS YP_002987310.1 242239129 8090287 2011222..2012337 1 NC_012880.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2012337 anmK 8090287 anmK Dickeya dadantii Ech703 anhydro-N-acetylmuramic acid kinase YP_002987310.1 2011222 D 579405 CDS YP_002987311.1 242239130 8090288 2012455..2012751 1 NC_012880.1 KEGG: eca:ECA1934 lipoprotein; lipoprotein 2012751 8090288 Dd703_1692 Dickeya dadantii Ech703 lipoprotein YP_002987311.1 2012455 D 579405 CDS YP_002987312.1 242239131 8090289 2012839..2013540 1 NC_012880.1 KEGG: eca:ECA1935 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 2013540 8090289 Dd703_1693 Dickeya dadantii Ech703 pyridoxamine 5'-phosphate oxidase YP_002987312.1 2012839 D 579405 CDS YP_002987313.1 242239132 8090290 2013682..2014956 1 NC_012880.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2014956 8090290 Dd703_1694 Dickeya dadantii Ech703 tyrosyl-tRNA synthetase YP_002987313.1 2013682 D 579405 CDS YP_002987314.1 242239133 8090291 2015132..2015992 1 NC_012880.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 2015992 8090291 Dd703_1695 Dickeya dadantii Ech703 pyridoxamine kinase YP_002987314.1 2015132 D 579405 CDS YP_002987315.1 242239134 8090292 complement(2016134..2016748) 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: eca:ECA1938 glutathione S-transferase; glutathione S-transferase domain-containing protein 2016748 8090292 Dd703_1696 Dickeya dadantii Ech703 glutathione S-transferase domain-containing protein YP_002987315.1 2016134 R 579405 CDS YP_002987316.1 242239135 8090293 2017189..2019891 1 NC_012880.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: eca:ECA1941 aconitate hydratase; aconitate hydratase 1 2019891 8090293 Dd703_1697 Dickeya dadantii Ech703 aconitate hydratase 1 YP_002987316.1 2017189 D 579405 CDS YP_002987317.1 242239136 8090294 2020070..2021683 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1942 periplasmic oligopeptide-binding protein; family 5 extracellular solute-binding protein 2021683 8090294 Dd703_1698 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987317.1 2020070 D 579405 CDS YP_002987318.1 242239137 8090295 complement(2021725..2022318) 1 NC_012880.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 2022318 ribA 8090295 ribA Dickeya dadantii Ech703 GTP cyclohydrolase II YP_002987318.1 2021725 R 579405 CDS YP_002987319.1 242239138 8090296 2022586..2023365 1 NC_012880.1 KEGG: eca:ECA1944 phosphatidylglycerophosphatase B; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphatidylglycerophosphatase B 2023365 8090296 Dd703_1700 Dickeya dadantii Ech703 phosphatidylglycerophosphatase B YP_002987319.1 2022586 D 579405 CDS YP_002987320.1 242239139 8090297 2023554..2023859 1 NC_012880.1 PFAM: protein of unknown function DUF1049; KEGG: eca:ECA1955 hypothetical protein; hypothetical protein 2023859 8090297 Dd703_1701 Dickeya dadantii Ech703 hypothetical protein YP_002987320.1 2023554 D 579405 CDS YP_002987321.1 242239140 8090298 2023873..2025042 1 NC_012880.1 SMART: hypothetical protein; KEGG: eca:ECA1956 hypothetical protein; hypothetical protein 2025042 8090298 Dd703_1702 Dickeya dadantii Ech703 hypothetical protein YP_002987321.1 2023873 D 579405 CDS YP_002987322.1 242239141 8090299 2025281..2026012 1 NC_012880.1 KEGG: eta:ETA_16210 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2026012 8090299 Dd703_1703 Dickeya dadantii Ech703 orotidine 5'-phosphate decarboxylase YP_002987322.1 2025281 D 579405 CDS YP_002987323.1 242239142 8090300 2026012..2026338 1 NC_012880.1 TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1; KEGG: kpe:KPK_3156 translation initation factor SUI1; translation initiation factor SUI1 2026338 8090300 Dd703_1704 Dickeya dadantii Ech703 translation initiation factor SUI1 YP_002987323.1 2026012 D 579405 CDS YP_002987324.1 242239143 8090301 complement(2026504..2026719) 1 NC_012880.1 KEGG: kpe:KPK_3155 osmotically-inducible lipoprotein B; osmotically-inducible lipoprotein B 2026719 8090301 Dd703_1705 Dickeya dadantii Ech703 osmotically-inducible lipoprotein B YP_002987324.1 2026504 R 579405 CDS YP_002987325.1 242239144 8090302 2027059..2027754 1 NC_012880.1 TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: eca:ECA1960 L-ribulose-5-phosphate 4-epimerase; L-ribulose-5-phosphate 4-epimerase 2027754 8090302 Dd703_1706 Dickeya dadantii Ech703 L-ribulose-5-phosphate 4-epimerase YP_002987325.1 2027059 D 579405 CDS YP_002987326.1 242239145 8090303 2028207..2029214 1 NC_012880.1 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 2029214 8090303 Dd703_1707 Dickeya dadantii Ech703 2-keto-3-deoxygluconate permease YP_002987326.1 2028207 D 579405 CDS YP_002987327.1 242239146 8090304 complement(2029452..2031524) 1 NC_012880.1 PFAM: carbon starvation protein CstA; KEGG: spe:Spro_2639 carbon starvation protein CstA; carbon starvation protein CstA 2031524 8090304 Dd703_1708 Dickeya dadantii Ech703 carbon starvation protein CstA YP_002987327.1 2029452 R 579405 CDS YP_002987328.1 242239147 8090305 complement(2032080..2032997) 1 NC_012880.1 PFAM: aldo/keto reductase; KEGG: eca:ECA1962 oxidoreductase; aldo/keto reductase 2032997 8090305 Dd703_1709 Dickeya dadantii Ech703 aldo/keto reductase YP_002987328.1 2032080 R 579405 CDS YP_002987329.1 242239148 8090306 complement(2033128..2035101) 1 NC_012880.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 2035101 8090306 Dd703_1710 Dickeya dadantii Ech703 exoribonuclease II YP_002987329.1 2033128 R 579405 CDS YP_002987330.1 242239149 8090307 complement(2035212..2037521) 1 NC_012880.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eca:ECA1964 molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 2037521 8090307 Dd703_1711 Dickeya dadantii Ech703 oxidoreductase alpha (molybdopterin) subunit YP_002987330.1 2035212 R 579405 CDS YP_002987331.1 242239150 8090308 2037722..2038618 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1965 LysR family transcriptional regulator; LysR family transcriptional regulator 2038618 8090308 Dd703_1712 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987331.1 2037722 D 579405 CDS YP_002987332.1 242239151 8090309 complement(2038683..2039474) 1 NC_012880.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 2039474 8090309 Dd703_1713 Dickeya dadantii Ech703 enoyl-(acyl carrier protein) reductase YP_002987332.1 2038683 R 579405 CDS YP_002987333.1 242239152 8090310 complement(2039717..2040532) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1973 peptide transporter ATP-binding protein; ABC transporter 2040532 8090310 Dd703_1714 Dickeya dadantii Ech703 ABC transporter YP_002987333.1 2039717 R 579405 CDS YP_002987334.1 242239153 8090311 complement(2040532..2041524) 1 NC_012880.1 KEGG: eca:ECA1974 peptide transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 2041524 8090311 Dd703_1715 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002987334.1 2040532 R 579405 CDS YP_002987335.1 242239154 8090312 complement(2041540..2042430) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1975 peptide transporter permease protein; binding-protein-dependent transporters inner membrane component 2042430 8090312 Dd703_1716 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987335.1 2041540 R 579405 CDS YP_002987336.1 242239155 8090313 complement(2042417..2043382) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1976 peptide transporter permease protein; binding-protein-dependent transporters inner membrane component 2043382 8090313 Dd703_1717 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987336.1 2042417 R 579405 CDS YP_002987337.1 242239156 8090314 complement(2043379..2045124) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1977 peptide transport periplasmic protein; family 5 extracellular solute-binding protein 2045124 8090314 Dd703_1718 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987337.1 2043379 R 579405 CDS YP_002987338.1 242239157 8090315 2045431..2046984 1 NC_012880.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA2530 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 2046984 8090315 Dd703_1719 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_002987338.1 2045431 D 579405 CDS YP_002987339.1 242239158 8090316 2047211..2048401 1 NC_012880.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: spe:Spro_2626 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 2048401 8090316 Dd703_1720 Dickeya dadantii Ech703 cobalamin synthesis protein P47K YP_002987339.1 2047211 D 579405 CDS YP_002987340.1 242239159 8090317 complement(2048469..2049464) 1 NC_012880.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2049464 pspF 8090317 pspF Dickeya dadantii Ech703 phage shock protein operon transcriptional activator YP_002987340.1 2048469 R 579405 CDS YP_002987341.1 242239160 8090318 2049681..2050346 1 NC_012880.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA 2050346 8090318 Dd703_1722 Dickeya dadantii Ech703 phage shock protein PspA YP_002987341.1 2049681 D 579405 CDS YP_002987342.1 242239161 8090319 2050410..2050640 1 NC_012880.1 TIGRFAM: phage shock protein B; PFAM: shock B family protein; KEGG: spe:Spro_2623 phage shock protein B; phage shock protein B 2050640 8090319 Dd703_1723 Dickeya dadantii Ech703 phage shock protein B YP_002987342.1 2050410 D 579405 CDS YP_002987343.1 242239162 8090320 2050640..2050993 1 NC_012880.1 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC 2050993 8090320 Dd703_1724 Dickeya dadantii Ech703 DNA-binding transcriptional activator PspC YP_002987343.1 2050640 D 579405 CDS YP_002987344.1 242239163 8090321 2051228..2052637 1 NC_012880.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: eca:ECA1986 hypothetical protein; hypothetical protein 2052637 8090321 Dd703_1725 Dickeya dadantii Ech703 hypothetical protein YP_002987344.1 2051228 D 579405 CDS YP_002987345.1 242239164 8090322 2052634..2053692 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA1987 hypothetical protein; hypothetical protein 2053692 8090322 Dd703_1726 Dickeya dadantii Ech703 hypothetical protein YP_002987345.1 2052634 D 579405 CDS YP_002987346.1 242239165 8090323 2053692..2053820 1 NC_012880.1 hypothetical protein 2053820 8090323 Dd703_1727 Dickeya dadantii Ech703 hypothetical protein YP_002987346.1 2053692 D 579405 CDS YP_002987347.1 242239166 8090324 2054026..2055618 1 NC_012880.1 PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: eca:ECA1988 peptidase; peptidase dimerisation domain-containing protein 2055618 8090324 Dd703_1728 Dickeya dadantii Ech703 peptidase dimerisation domain-containing protein YP_002987347.1 2054026 D 579405 CDS YP_002987348.1 242239167 8090325 2055760..2057328 1 NC_012880.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR 2057328 8090325 Dd703_1729 Dickeya dadantii Ech703 DNA-binding transcriptional regulator TyrR YP_002987348.1 2055760 D 579405 CDS YP_002987349.1 242239168 8090326 complement(2057347..2057892) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB1022 acetyltransferase; N-acetyltransferase GCN5 2057892 8090326 Dd703_1730 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002987349.1 2057347 R 579405 CDS YP_002987350.1 242239169 8090327 complement(2058052..2058942) 1 NC_012880.1 KEGG: pap:PSPA7_4128 hypothetical protein; hypothetical protein 2058942 8090327 Dd703_1731 Dickeya dadantii Ech703 hypothetical protein YP_002987350.1 2058052 R 579405 CDS YP_002987351.1 242239170 8090328 2059055..2060491 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA1262 major facilitator transporter; major facilitator superfamily protein 2060491 8090328 Dd703_1732 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987351.1 2059055 D 579405 CDS YP_002987352.1 242239171 8090329 complement(2060724..2061227) 1 NC_012880.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2061227 tpx 8090329 tpx Dickeya dadantii Ech703 thiol peroxidase YP_002987352.1 2060724 R 579405 CDS YP_002987353.1 242239172 8090330 complement(2061264..2062013) 1 NC_012880.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: eca:ECA1991 murein peptide amidase A; murein peptide amidase A 2062013 8090330 Dd703_1734 Dickeya dadantii Ech703 murein peptide amidase A YP_002987353.1 2061264 R 579405 CDS YP_002987354.1 242239173 8090331 2062412..2064028 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1992 periplasmic murein peptide-binding protein; family 5 extracellular solute-binding protein 2064028 8090331 Dd703_1735 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987354.1 2062412 D 579405 CDS YP_002987355.1 242239174 8090333 2065271..2066242 1 NC_012880.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: eca:ECA1993 zinc transporter; zinc transporter 2066242 zntB 8090333 zntB Dickeya dadantii Ech703 zinc transporter YP_002987355.1 2065271 D 579405 CDS YP_002987356.1 242239175 8090334 complement(2066571..2067512) 1 NC_012880.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2067512 8090334 Dd703_1738 Dickeya dadantii Ech703 C32 tRNA thiolase YP_002987356.1 2066571 R 579405 CDS YP_002987357.1 242239176 8090335 2067880..2068422 1 NC_012880.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bid:Bind_2498 flavin reductase domain-containing protein; flavin reductase domain-containing protein 2068422 8090335 Dd703_1739 Dickeya dadantii Ech703 flavin reductase domain-containing protein YP_002987357.1 2067880 D 579405 CDS YP_002987358.1 242239177 8090336 complement(2068672..2069001) 1 NC_012880.1 hypothetical protein 2069001 8090336 Dd703_1740 Dickeya dadantii Ech703 hypothetical protein YP_002987358.1 2068672 R 579405 CDS YP_002987359.1 242239178 8090337 2069558..2070028 1 NC_012880.1 hypothetical protein 2070028 8090337 Dd703_1741 Dickeya dadantii Ech703 hypothetical protein YP_002987359.1 2069558 D 579405 CDS YP_002987360.1 242239179 8090338 2070282..2070566 1 NC_012880.1 PFAM: protein of unknown function DUF333; KEGG: eca:ECA1999 lipoprotein; hypothetical protein 2070566 8090338 Dd703_1742 Dickeya dadantii Ech703 hypothetical protein YP_002987360.1 2070282 D 579405 CDS YP_002987361.1 242239180 8090339 complement(2070629..2071621) 1 NC_012880.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: eca:ECA2000 D-lactate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2071621 8090339 Dd703_1743 Dickeya dadantii Ech703 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_002987361.1 2070629 R 579405 CDS YP_002987362.1 242239181 8090340 complement(2071802..2073355) 1 NC_012880.1 KEGG: eca:ECA2002 aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 2073355 8090340 Dd703_1744 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_002987362.1 2071802 R 579405 CDS YP_002987363.1 242239182 8090341 complement(2073905..2074510) 1 NC_012880.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2074510 8090341 Dd703_1745 Dickeya dadantii Ech703 azoreductase YP_002987363.1 2073905 R 579405 CDS YP_002987364.1 242239183 8090342 2074745..2078632 1 NC_012880.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 2078632 8090342 Dd703_1746 Dickeya dadantii Ech703 ATP-dependent RNA helicase HrpA YP_002987364.1 2074745 D 579405 CDS YP_002987365.1 242239184 8090343 complement(2078764..2079459) 1 NC_012880.1 PFAM: protein of unknown function DUF162; KEGG: eca:ECA1918 hypothetical protein; hypothetical protein 2079459 8090343 Dd703_1747 Dickeya dadantii Ech703 hypothetical protein YP_002987365.1 2078764 R 579405 CDS YP_002987366.1 242239185 8090344 complement(2079456..2080880) 1 NC_012880.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: cko:CKO_04246 hypothetical protein; iron-sulfur cluster binding protein 2080880 8090344 Dd703_1748 Dickeya dadantii Ech703 iron-sulfur cluster binding protein YP_002987366.1 2079456 R 579405 CDS YP_002987367.1 242239186 8090345 complement(2080891..2081610) 1 NC_012880.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: elf:LF82_3514 uncharacterized protein YkgE; hypothetical protein 2081610 8090345 Dd703_1749 Dickeya dadantii Ech703 hypothetical protein YP_002987367.1 2080891 R 579405 CDS YP_002987368.1 242239187 8090346 complement(2081681..2083231) 1 NC_012880.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: eca:ECA1921 L-lactate permease; L-lactate transport 2083231 8090346 Dd703_1750 Dickeya dadantii Ech703 L-lactate transport YP_002987368.1 2081681 R 579405 CDS YP_002987369.1 242239188 8090347 complement(2083731..2084558) 1 NC_012880.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: eca:ECA2009 exported protease; peptidase S1 and S6 chymotrypsin/Hap 2084558 8090347 Dd703_1751 Dickeya dadantii Ech703 peptidase S1 and S6 chymotrypsin/Hap YP_002987369.1 2083731 R 579405 CDS YP_002987370.1 242239189 8090348 complement(2084904..2085614) 1 NC_012880.1 PFAM: acid shock repeat protein; KEGG: sml:Smlt0383 histone H1-like protein; acid shock repeat protein 2085614 8090348 Dd703_1752 Dickeya dadantii Ech703 acid shock repeat protein YP_002987370.1 2084904 R 579405 CDS YP_002987371.1 242239190 8090349 complement(2085788..2087095) 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA2012 sensor protein RstB; sensor protein RstB 2087095 8090349 Dd703_1753 Dickeya dadantii Ech703 sensor protein RstB YP_002987371.1 2085788 R 579405 CDS YP_002987372.1 242239191 8090350 complement(2087092..2087835) 1 NC_012880.1 response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 2087835 8090350 Dd703_1754 Dickeya dadantii Ech703 DNA-binding transcriptional regulator RstA YP_002987372.1 2087092 R 579405 CDS YP_002987373.1 242239192 8090351 2088203..2088631 1 NC_012880.1 KEGG: spe:Spro_2588 hypothetical protein; hypothetical protein 2088631 8090351 Dd703_1755 Dickeya dadantii Ech703 hypothetical protein YP_002987373.1 2088203 D 579405 CDS YP_002987374.1 242239193 8090352 complement(2088659..2090377) 1 NC_012880.1 TIGRFAM: sulfate transporter; PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: eca:ECA2021 sulfate transporter YchM; sulfate transporter 2090377 8090352 Dd703_1756 Dickeya dadantii Ech703 sulfate transporter YP_002987374.1 2088659 R 579405 CDS YP_002987375.1 242239194 8090353 complement(2090656..2091756) 1 NC_012880.1 TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: eca:ECA2022 calcium/sodium:proton antiporter; calcium/sodium:proton antiporter 2091756 8090353 Dd703_1757 Dickeya dadantii Ech703 calcium/sodium:proton antiporter YP_002987375.1 2090656 R 579405 CDS YP_002987376.1 242239195 8090354 2092337..2093017 1 NC_012880.1 PFAM: cation transport protein ChaC; KEGG: eca:ECA2025 cation transporter; cation transport protein ChaC 2093017 8090354 Dd703_1758 Dickeya dadantii Ech703 cation transport protein ChaC YP_002987376.1 2092337 D 579405 CDS YP_002987377.1 242239196 8090355 2093138..2094181 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_2915 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2094181 8090355 Dd703_1759 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987377.1 2093138 D 579405 CDS YP_002987378.1 242239197 8090356 2094178..2095053 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_2914 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2095053 8090356 Dd703_1760 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987378.1 2094178 D 579405 CDS YP_002987379.1 242239198 8090357 2095040..2095864 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: spe:Spro_2913 ABC transporter-related protein; ABC transporter 2095864 8090357 Dd703_1761 Dickeya dadantii Ech703 ABC transporter YP_002987379.1 2095040 D 579405 CDS YP_002987380.1 242239199 8090358 2095861..2096562 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: spe:Spro_2912 ABC transporter-related protein; ABC transporter 2096562 8090358 Dd703_1762 Dickeya dadantii Ech703 ABC transporter YP_002987380.1 2095861 D 579405 CDS YP_002987381.1 242239200 8090359 2096610..2098220 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eta:ETA_25780 ABC transporter periplasmic oligopeptide-binding protein; family 5 extracellular solute-binding protein 2098220 8090359 Dd703_1763 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987381.1 2096610 D 579405 CDS YP_002987382.1 242239201 8090360 complement(2098395..2099450) 1 NC_012880.1 KEGG: eca:ECA2026 hypothetical protein; hypothetical protein 2099450 8090360 Dd703_1764 Dickeya dadantii Ech703 hypothetical protein YP_002987382.1 2098395 R 579405 CDS YP_002987383.1 242239202 8090361 complement(2099679..2100947) 1 NC_012880.1 PFAM: acyltransferase 3; KEGG: eca:ECA2027 acyltransferase; acyltransferase 3 2100947 8090361 Dd703_1765 Dickeya dadantii Ech703 acyltransferase 3 YP_002987383.1 2099679 R 579405 CDS YP_002987384.1 242239203 8090362 complement(2101365..2102015) 1 NC_012880.1 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL 2102015 8090362 Dd703_1766 Dickeya dadantii Ech703 transcriptional regulator NarL YP_002987384.1 2101365 R 579405 CDS YP_002987385.1 242239204 8090363 complement(2102005..2103819) 1 NC_012880.1 KEGG: eca:ECA2029 nitrate/nitrite sensor protein NarX; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; nitrate/nitrite sensor protein NarX 2103819 8090363 Dd703_1767 Dickeya dadantii Ech703 nitrate/nitrite sensor protein NarX YP_002987385.1 2102005 R 579405 CDS YP_002987386.1 242239205 8090364 2104148..2105554 1 NC_012880.1 TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2030 nitrite extrusion protein; nitrite transporter 2105554 8090364 Dd703_1768 Dickeya dadantii Ech703 nitrite transporter YP_002987386.1 2104148 D 579405 CDS YP_002987387.1 242239206 8090365 2105701..2106297 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_0727 TetR family transcriptional regulator; TetR family transcriptional regulator 2106297 8090365 Dd703_1769 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002987387.1 2105701 D 579405 CDS YP_002987388.1 242239207 8090366 complement(2106394..2108394) 1 NC_012880.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vfm:VFMJ11_A0422 NADH oxidase; NADH:flavin oxidoreductase 2108394 8090366 Dd703_1770 Dickeya dadantii Ech703 NADH:flavin oxidoreductase YP_002987388.1 2106394 R 579405 CDS YP_002987389.1 242239208 8090367 2109037..2112804 1 NC_012880.1 KEGG: eca:ECA2031 respiratory nitrate reductase 1 alpha chain; TIGRFAM: nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; nitrate reductase subunit alpha 2112804 8090367 Dd703_1771 Dickeya dadantii Ech703 nitrate reductase subunit alpha YP_002987389.1 2109037 D 579405 CDS YP_002987390.1 242239209 8090368 2112804..2114366 1 NC_012880.1 TIGRFAM: nitrate reductase subunit beta; KEGG: eca:ECA2032 respiratory nitrate reductase 1 beta chain; nitrate reductase subunit beta 2114366 8090368 Dd703_1772 Dickeya dadantii Ech703 nitrate reductase subunit beta YP_002987390.1 2112804 D 579405 CDS YP_002987391.1 242239210 8090369 2114363..2115082 1 NC_012880.1 KEGG: eca:ECA2033 respiratory nitrate reductase 1 delta chain; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase subunit delta; nitrate reductase molybdenum cofactor assembly chaperone 2115082 8090369 Dd703_1773 Dickeya dadantii Ech703 nitrate reductase molybdenum cofactor assembly chaperone YP_002987391.1 2114363 D 579405 CDS YP_002987392.1 242239211 8090370 2115082..2115759 1 NC_012880.1 KEGG: eca:ECA2034 respiratory nitrate reductase 1 gamma chain; TIGRFAM: respiratory nitrate reductase, subunit gamma; PFAM: nitrate reductase subunit gamma; respiratory nitrate reductase subunit gamma 2115759 8090370 Dd703_1774 Dickeya dadantii Ech703 respiratory nitrate reductase subunit gamma YP_002987392.1 2115082 D 579405 CDS YP_002987393.1 242239212 8090371 complement(2115802..2116302) 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: sit:TM1040_0128 NUDIX hydrolase; NUDIX hydrolase 2116302 8090371 Dd703_1775 Dickeya dadantii Ech703 NUDIX hydrolase YP_002987393.1 2115802 R 579405 CDS YP_002987394.1 242239213 8090372 2116624..2117775 1 NC_012880.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ppr:PBPRA2519 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2117775 8090372 Dd703_1776 Dickeya dadantii Ech703 iron-containing alcohol dehydrogenase YP_002987394.1 2116624 D 579405 CDS YP_002987395.1 242239214 8090373 2118288..2118410 1 NC_012880.1 hypothetical protein 2118410 8090373 Dd703_1777 Dickeya dadantii Ech703 hypothetical protein YP_002987395.1 2118288 D 579405 CDS YP_002987396.1 242239215 8090374 complement(2118450..2119481) 1 NC_012880.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2119481 8090374 Dd703_1778 Dickeya dadantii Ech703 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_002987396.1 2118450 R 579405 CDS YP_002987397.1 242239216 8090375 complement(2119509..2120486) 1 NC_012880.1 PFAM: Domain of unknown function DUF1852; KEGG: spe:Spro_3175 hypothetical protein; hypothetical protein 2120486 8090375 Dd703_1779 Dickeya dadantii Ech703 hypothetical protein YP_002987397.1 2119509 R 579405 CDS YP_002987398.1 242239217 8090376 complement(2120769..2120999) 1 NC_012880.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: esa:ESA_01873 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2120999 8090376 Dd703_1780 Dickeya dadantii Ech703 4-oxalocrotonate tautomerase YP_002987398.1 2120769 R 579405 CDS YP_002987399.1 242239218 8090377 2121201..2121965 1 NC_012880.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA3201 hypothetical protein; hypothetical protein 2121965 8090377 Dd703_1781 Dickeya dadantii Ech703 hypothetical protein YP_002987399.1 2121201 D 579405 CDS YP_002987400.1 242239219 8090378 complement(2122087..2123181) 1 NC_012880.1 KEGG: eca:ECA2051 putitive ABC-transporter ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase; PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2123181 8090378 Dd703_1782 Dickeya dadantii Ech703 spermidine/putrescine ABC transporter ATPase YP_002987400.1 2122087 R 579405 CDS YP_002987401.1 242239220 8090379 complement(2123576..2125081) 1 NC_012880.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: eca:ECA2052 GntR family transcriptional regulator; GntR family transcriptional regulator 2125081 8090379 Dd703_1783 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002987401.1 2123576 R 579405 CDS YP_002987402.1 242239221 8090380 2125208..2126473 1 NC_012880.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2126473 8090380 Dd703_1784 Dickeya dadantii Ech703 4-aminobutyrate aminotransferase YP_002987402.1 2125208 D 579405 CDS YP_002987403.1 242239222 8090381 2126489..2127949 1 NC_012880.1 KEGG: eca:ECA2054 succinate-semialdehyde dehydrogenase [NADP+]; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 2127949 8090381 Dd703_1785 Dickeya dadantii Ech703 succinate-semialdehyde dehydrogenase YP_002987403.1 2126489 D 579405 CDS YP_002987404.1 242239223 8090382 2128349..2129380 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2055 transporter, periplasmic solute-binding protein; family 1 extracellular solute-binding protein 2129380 8090382 Dd703_1786 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002987404.1 2128349 D 579405 CDS YP_002987405.1 242239224 8090383 2129416..2130687 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2056 transporter, permease protein; binding-protein-dependent transporters inner membrane component 2130687 8090383 Dd703_1787 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987405.1 2129416 D 579405 CDS YP_002987406.1 242239225 8090384 2130703..2131530 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2057 transporter, permease protein; binding-protein-dependent transporters inner membrane component 2131530 8090384 Dd703_1788 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987406.1 2130703 D 579405 CDS YP_002987407.1 242239226 8090385 complement(2131621..2133195) 1 NC_012880.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: esa:ESA_02175 hypothetical protein; EAL domain-containing protein 2133195 8090385 Dd703_1789 Dickeya dadantii Ech703 EAL domain-containing protein YP_002987407.1 2131621 R 579405 CDS YP_002987408.1 242239227 8090386 complement(2133638..2134417) 1 NC_012880.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: ent:Ent638_0488 DeoR family transcriptional regulator; DeoR family transcriptional regulator 2134417 8090386 Dd703_1790 Dickeya dadantii Ech703 DeoR family transcriptional regulator YP_002987408.1 2133638 R 579405 CDS YP_002987409.1 242239228 8090387 2134516..2135328 1 NC_012880.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: eca:ECA2167 inositol monophosphatase; histidinol-phosphate phosphatase 2135328 8090387 Dd703_1791 Dickeya dadantii Ech703 histidinol-phosphate phosphatase YP_002987409.1 2134516 D 579405 CDS YP_002987410.1 242239229 8090388 2135375..2136535 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_3360 major facilitator transporter; major facilitator superfamily protein 2136535 8090388 Dd703_1792 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987410.1 2135375 D 579405 CDS YP_002987411.1 242239230 8090389 2136566..2137375 1 NC_012880.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA1906 hydrolase; HAD-superfamily hydrolase 2137375 8090389 Dd703_1793 Dickeya dadantii Ech703 HAD-superfamily hydrolase YP_002987411.1 2136566 D 579405 CDS YP_002987412.1 242239231 8090390 complement(2137382..2138458) 1 NC_012880.1 PFAM: NAD/NADP octopine/nopaline dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: smd:Smed_3845 opine dehydrogenase; NAD/NADP octopine/nopaline dehydrogenase 2138458 8090390 Dd703_1794 Dickeya dadantii Ech703 NAD/NADP octopine/nopaline dehydrogenase YP_002987412.1 2137382 R 579405 CDS YP_002987413.1 242239232 8090391 complement(2138885..2139850) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpi:Rpic_2081 LysR family transcriptional regulator; LysR family transcriptional regulator 2139850 8090391 Dd703_1795 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987413.1 2138885 R 579405 CDS YP_002987414.1 242239233 8090392 2140155..2141612 1 NC_012880.1 PFAM: FAD dependent oxidoreductase; KEGG: azc:AZC_3772 oxidoreductase; FAD dependent oxidoreductase 2141612 8090392 Dd703_1796 Dickeya dadantii Ech703 FAD dependent oxidoreductase YP_002987414.1 2140155 D 579405 CDS YP_002987415.1 242239234 8090393 2141605..2142447 1 NC_012880.1 PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_3773 prolyl aminopeptidase; alpha/beta hydrolase fold protein 2142447 8090393 Dd703_1797 Dickeya dadantii Ech703 alpha/beta hydrolase fold protein YP_002987415.1 2141605 D 579405 CDS YP_002987416.1 242239235 8090394 2142447..2143367 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: azc:AZC_3774 oligopeptide ABC transporter permease protein; binding-protein-dependent transporters inner membrane component 2143367 8090394 Dd703_1798 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987416.1 2142447 D 579405 CDS YP_002987417.1 242239236 8090395 2143380..2144237 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: azc:AZC_3775 oligopeptide ABC transporter permease protein; binding-protein-dependent transporters inner membrane component 2144237 8090395 Dd703_1799 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987417.1 2143380 D 579405 CDS YP_002987418.1 242239237 8090396 2144234..2145436 1 NC_012880.1 PFAM: peptidase M24; creatinase; KEGG: azc:AZC_3776 Xaa-Pro aminopeptidase; peptidase M24 2145436 8090396 Dd703_1800 Dickeya dadantii Ech703 peptidase M24 YP_002987418.1 2144234 D 579405 CDS YP_002987419.1 242239238 8090397 2145441..2146445 1 NC_012880.1 KEGG: azc:AZC_3777 oligopeptide ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; peptide ABC transporter ATPase 2146445 8090397 Dd703_1801 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002987419.1 2145441 D 579405 CDS YP_002987420.1 242239239 8090398 2146442..2147365 1 NC_012880.1 KEGG: azc:AZC_3778 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 2147365 8090398 Dd703_1802 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002987420.1 2146442 D 579405 CDS YP_002987421.1 242239240 8090399 2147467..2148966 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_3779 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2148966 8090399 Dd703_1803 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987421.1 2147467 D 579405 CDS YP_002987422.1 242239241 8090400 2149086..2149433 1 NC_012880.1 hypothetical protein 2149433 8090400 Dd703_1804 Dickeya dadantii Ech703 hypothetical protein YP_002987422.1 2149086 D 579405 CDS YP_002987423.1 242239242 8090401 2149445..2150233 1 NC_012880.1 KEGG: bxe:Bxe_B2355 hypothetical protein; hypothetical protein 2150233 8090401 Dd703_1805 Dickeya dadantii Ech703 hypothetical protein YP_002987423.1 2149445 D 579405 CDS YP_002987424.1 242239243 8090402 complement(2150302..2152260) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: yen:YE4139 methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis sensory transducer 2152260 8090402 Dd703_1806 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987424.1 2150302 R 579405 CDS YP_002987425.1 242239244 8090403 2153001..2154587 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1008 ABC transporter substrate-binding protein; family 5 extracellular solute-binding protein 2154587 8090403 Dd703_1807 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987425.1 2153001 D 579405 CDS YP_002987426.1 242239245 8090404 2154670..2155656 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1007 ABC transporter permease; binding-protein-dependent transporters inner membrane component 2155656 8090404 Dd703_1808 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987426.1 2154670 D 579405 CDS YP_002987427.1 242239246 8090405 2155658..2156563 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1006 ABC transporter permease; binding-protein-dependent transporters inner membrane component 2156563 8090405 Dd703_1809 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987427.1 2155658 D 579405 CDS YP_002987428.1 242239247 8090406 2156560..2158260 1 NC_012880.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: eca:ECA1005 ABC transporter ATP-binding protein; ABC transporter 2158260 8090406 Dd703_1810 Dickeya dadantii Ech703 ABC transporter YP_002987428.1 2156560 D 579405 CDS YP_002987429.1 242239248 8090407 2158273..2159052 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB4185 oxidoreductase; short-chain dehydrogenase/reductase SDR 2159052 8090407 Dd703_1811 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002987429.1 2158273 D 579405 CDS YP_002987430.1 242239249 8090408 2159114..2160316 1 NC_012880.1 KEGG: eca:ECA1004 hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2160316 8090408 Dd703_1812 Dickeya dadantii Ech703 amidohydrolase YP_002987430.1 2159114 D 579405 CDS YP_002987431.1 242239250 8090409 2160313..2161566 1 NC_012880.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:blr2222 D-amino acid dehydrogenase small subunit; FAD dependent oxidoreductase 2161566 8090409 Dd703_1813 Dickeya dadantii Ech703 FAD dependent oxidoreductase YP_002987431.1 2160313 D 579405 CDS YP_002987432.1 242239251 8090410 2161695..2162345 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: eca:ECA1003 TetR family transcription factor; TetR family transcriptional regulator 2162345 8090410 Dd703_1814 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002987432.1 2161695 D 579405 CDS YP_002987433.1 242239252 8090411 2162410..2163324 1 NC_012880.1 PFAM: dihydrodipicolinate synthetase; KEGG: eca:ECA1002 dihydrodipicolinate synthase; dihydrodipicolinate synthetase 2163324 8090411 Dd703_1815 Dickeya dadantii Ech703 dihydrodipicolinate synthetase YP_002987433.1 2162410 D 579405 CDS YP_002987434.1 242239253 8090412 complement(2163452..2165407) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: yen:YE4139 methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis sensory transducer 2165407 8090412 Dd703_1816 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987434.1 2163452 R 579405 CDS YP_002987435.1 242239254 8090413 complement(2165892..2167142) 1 NC_012880.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transporter 2167142 8090413 Dd703_1817 Dickeya dadantii Ech703 transporter YP_002987435.1 2165892 R 579405 CDS YP_002987436.1 242239255 8090414 complement(2167423..2168043) 1 NC_012880.1 KEGG: hypothetical protein; hypothetical protein 2168043 8090414 Dd703_1818 Dickeya dadantii Ech703 hypothetical protein YP_002987436.1 2167423 R 579405 CDS YP_002987437.1 242239256 8090415 complement(2168580..2169203) 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: kpn:KPN_03867 glutathione S-transferase; glutathione S-transferase domain-containing protein 2169203 8090415 Dd703_1819 Dickeya dadantii Ech703 glutathione S-transferase domain-containing protein YP_002987437.1 2168580 R 579405 CDS YP_002987438.1 242239257 8090416 2169814..2170260 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0311 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2170260 8090416 Dd703_1820 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002987438.1 2169814 D 579405 CDS YP_002987439.1 242239258 8090417 complement(2170338..2171768) 1 NC_012880.1 PFAM: glycoside hydrolase family 1; KEGG: spe:Spro_0575 cryptic 6-phospho-beta-glucosidase; cryptic 6-phospho-beta-glucosidase 2171768 8090417 Dd703_1821 Dickeya dadantii Ech703 cryptic 6-phospho-beta-glucosidase YP_002987439.1 2170338 R 579405 CDS YP_002987440.1 242239259 8090418 complement(2171845..2173314) 1 NC_012880.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC 2173314 8090418 Dd703_1822 Dickeya dadantii Ech703 PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC YP_002987440.1 2171845 R 579405 CDS YP_002987441.1 242239260 8090419 2173647..2174666 1 NC_012880.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ent:Ent638_3187 LacI family transcription regulator; LacI family transcriptional regulator 2174666 8090419 Dd703_1823 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002987441.1 2173647 D 579405 CDS YP_002987442.1 242239261 8090421 complement(2175136..2175972) 1 NC_012880.1 KEGG: rpc:RPC_2976 hypothetical protein; hypothetical protein 2175972 8090421 Dd703_1825 Dickeya dadantii Ech703 hypothetical protein YP_002987442.1 2175136 R 579405 CDS YP_002987443.1 242239262 8090422 complement(2176015..2176734) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: vei:Veis_4467 ABC transporter; ABC transporter 2176734 8090422 Dd703_1826 Dickeya dadantii Ech703 ABC transporter YP_002987443.1 2176015 R 579405 CDS YP_002987444.1 242239263 8090423 complement(2176731..2177513) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bch:Bcen2424_6646 ABC transporter; ABC transporter 2177513 8090423 Dd703_1827 Dickeya dadantii Ech703 ABC transporter YP_002987444.1 2176731 R 579405 CDS YP_002987445.1 242239264 8090424 complement(2177510..2178397) 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: bcm:Bcenmc03_6243 inner-membrane translocator; inner-membrane translocator 2178397 8090424 Dd703_1828 Dickeya dadantii Ech703 inner-membrane translocator YP_002987445.1 2177510 R 579405 CDS YP_002987446.1 242239265 8090425 complement(2178390..2179283) 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_4470 inner-membrane translocator; inner-membrane translocator 2179283 8090425 Dd703_1829 Dickeya dadantii Ech703 inner-membrane translocator YP_002987446.1 2178390 R 579405 CDS YP_002987447.1 242239266 8090426 complement(2179324..2180451) 1 NC_012880.1 PFAM: extracellular ligand-binding receptor; KEGG: bch:Bcen2424_6643 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2180451 8090426 Dd703_1830 Dickeya dadantii Ech703 extracellular ligand-binding receptor YP_002987447.1 2179324 R 579405 CDS YP_002987448.1 242239267 8090427 2181143..2181862 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ara:Arad_7293 transcriptional regulator protein; GntR family transcriptional regulator 2181862 8090427 Dd703_1831 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002987448.1 2181143 D 579405 CDS YP_002987449.1 242239268 8090428 2181952..2182092 1 NC_012880.1 KEGG: Rnf183, RGD1564412_predicted; ring finger protein 183; Rnf183 ring finger protein 183 2182092 8090428 Dd703_1832 Dickeya dadantii Ech703 Rnf183 ring finger protein 183 YP_002987449.1 2181952 D 579405 CDS YP_002987450.1 242239269 8090429 2182227..2183030 1 NC_012880.1 KEGG: kpe:KPK_1534 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 2183030 8090429 Dd703_1833 Dickeya dadantii Ech703 pyrroline-5-carboxylate reductase YP_002987450.1 2182227 D 579405 CDS YP_002987451.1 242239270 8090430 complement(2183065..2184468) 1 NC_012880.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: azc:AZC_0730 transcriptional regulator; GntR family transcriptional regulator 2184468 8090430 Dd703_1834 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002987451.1 2183065 R 579405 CDS YP_002987452.1 242239271 8090431 2184696..2186330 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: rru:Rru_A0979 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2186330 8090431 Dd703_1835 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987452.1 2184696 D 579405 CDS YP_002987453.1 242239272 8090432 2186349..2187290 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: reh:H16_A2083 ABC-type transporter permease component: PepT family; binding-protein-dependent transporters inner membrane component 2187290 8090432 Dd703_1836 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987453.1 2186349 D 579405 CDS YP_002987454.1 242239273 8090433 2187322..2188194 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rru:Rru_A0981 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transporters inner membrane component 2188194 8090433 Dd703_1837 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987454.1 2187322 D 579405 CDS YP_002987455.1 242239274 8090434 2188218..2189888 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: reh:H16_A2085 ABC-type transporter duplicated ATPase domains:CUT2 family; ABC transporter 2189888 8090434 Dd703_1838 Dickeya dadantii Ech703 ABC transporter YP_002987455.1 2188218 D 579405 CDS YP_002987456.1 242239275 8090435 2190010..2191482 1 NC_012880.1 PFAM: amidase; KEGG: aav:Aave_0191 amidase; amidase 2191482 8090435 Dd703_1839 Dickeya dadantii Ech703 amidase YP_002987456.1 2190010 D 579405 CDS YP_002987457.1 242239276 8090436 2191740..2192180 1 NC_012880.1 KEGG: yen:YE2498 hypothetical protein; hypothetical protein 2192180 8090436 Dd703_1840 Dickeya dadantii Ech703 hypothetical protein YP_002987457.1 2191740 D 579405 CDS YP_002987458.1 242239277 8090437 2192450..2192929 1 NC_012880.1 KEGG: spe:Spro_2453 hypothetical protein; hypothetical protein 2192929 8090437 Dd703_1841 Dickeya dadantii Ech703 hypothetical protein YP_002987458.1 2192450 D 579405 CDS YP_002987459.1 242239278 8090438 2192975..2194429 1 NC_012880.1 PFAM: PepSY-associated TM helix domain protein; KEGG: eta:ETA_06010 iron-regulated membrane protein; PepSY-associated TM helix domain-containing protein 2194429 8090438 Dd703_1842 Dickeya dadantii Ech703 PepSY-associated TM helix domain-containing protein YP_002987459.1 2192975 D 579405 CDS YP_002987460.1 242239279 8090439 complement(2194637..2195650) 1 NC_012880.1 KEGG: kpn:KPN_01710 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase; glyceraldehyde-3-phosphate dehydrogenase 2195650 8090439 Dd703_1843 Dickeya dadantii Ech703 glyceraldehyde-3-phosphate dehydrogenase YP_002987460.1 2194637 R 579405 CDS YP_002987461.1 242239280 8090440 complement(2195728..2196708) 1 NC_012880.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: kpn:KPN_01709 helix-turn-helix, AraC type; AraC family transcriptional regulator 2196708 8090440 Dd703_1844 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002987461.1 2195728 R 579405 CDS YP_002987462.1 242239281 8090441 complement(2196926..2198140) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: pap:PSPA7_4707 MFS family transporter; major facilitator superfamily protein 2198140 8090441 Dd703_1845 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987462.1 2196926 R 579405 CDS YP_002987463.1 242239282 8090443 2198720..2200093 1 NC_012880.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 2200093 8090443 Dd703_1847 Dickeya dadantii Ech703 ATP-dependent RNA helicase DbpA YP_002987463.1 2198720 D 579405 CDS YP_002987464.1 242239283 8090445 complement(2200784..2201875) 1 NC_012880.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2201875 8090445 Dd703_1849 Dickeya dadantii Ech703 GTP-dependent nucleic acid-binding protein EngD YP_002987464.1 2200784 R 579405 CDS YP_002987465.1 242239284 8090446 complement(2202017..2202604) 1 NC_012880.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2202604 8090446 Dd703_1850 Dickeya dadantii Ech703 peptidyl-tRNA hydrolase YP_002987465.1 2202017 R 579405 CDS YP_002987466.1 242239285 8090447 2202877..2203146 1 NC_012880.1 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein 2203146 8090447 Dd703_1851 Dickeya dadantii Ech703 hypothetical protein YP_002987466.1 2202877 D 579405 CDS YP_002987467.1 242239286 8090448 complement(2203713..2204660) 1 NC_012880.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2204660 8090448 Dd703_1852 Dickeya dadantii Ech703 ribose-phosphate pyrophosphokinase YP_002987467.1 2203713 R 579405 CDS YP_002987468.1 242239287 8090449 complement(2204781..2205653) 1 NC_012880.1 KEGG: spe:Spro_1987 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2205653 8090449 Dd703_1853 Dickeya dadantii Ech703 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002987468.1 2204781 R 579405 CDS YP_002987469.1 242239288 8090450 complement(2205657..2206277) 1 NC_012880.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 2206277 lolB 8090450 lolB Dickeya dadantii Ech703 outer membrane lipoprotein LolB YP_002987469.1 2205657 R 579405 CDS YP_002987470.1 242239289 8090451 2206486..2207742 1 NC_012880.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2207742 hemA 8090451 hemA Dickeya dadantii Ech703 glutamyl-tRNA reductase YP_002987470.1 2206486 D 579405 CDS YP_002987471.1 242239290 8090452 2207787..2208872 1 NC_012880.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2208872 prfA 8090452 prfA Dickeya dadantii Ech703 peptide chain release factor 1 YP_002987471.1 2207787 D 579405 CDS YP_002987472.1 242239291 8090453 2208869..2209708 1 NC_012880.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: efe:EFER_1749 N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2; HemK family modification methylase 2209708 8090453 Dd703_1857 Dickeya dadantii Ech703 HemK family modification methylase YP_002987472.1 2208869 D 579405 CDS YP_002987473.1 242239292 8090454 2209957..2210766 1 NC_012880.1 KEGG: eca:ECA2193 transcriptional regulator; transcriptional regulator 2210766 8090454 Dd703_1858 Dickeya dadantii Ech703 transcriptional regulator YP_002987473.1 2209957 D 579405 CDS YP_002987474.1 242239293 8090455 2210803..2211657 1 NC_012880.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2211657 8090455 Dd703_1859 Dickeya dadantii Ech703 2-dehydro-3-deoxyphosphooctonate aldolase YP_002987474.1 2210803 D 579405 CDS YP_002987475.1 242239294 8090456 complement(2211800..2212738) 1 NC_012880.1 PFAM: protein of unknown function DUF1471; KEGG: eca:ECA2203 hypothetical protein; hypothetical protein 2212738 8090456 Dd703_1860 Dickeya dadantii Ech703 hypothetical protein YP_002987475.1 2211800 R 579405 CDS YP_002987476.1 242239295 8090457 2213232..2214761 1 NC_012880.1 forms a tetramer composed of 2 subunit alphas and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 2214761 pntA 8090457 pntA Dickeya dadantii Ech703 NAD(P) transhydrogenase subunit alpha YP_002987476.1 2213232 D 579405 CDS YP_002987477.1 242239296 8090458 2214772..2216160 1 NC_012880.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 subunit betas; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase 2216160 pntB 8090458 pntB Dickeya dadantii Ech703 pyridine nucleotide transhydrogenase YP_002987477.1 2214772 D 579405 CDS YP_002987478.1 242239297 8090459 complement(2216222..2217181) 1 NC_012880.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2217181 8090459 Dd703_1863 Dickeya dadantii Ech703 universal stress protein UspE YP_002987478.1 2216222 R 579405 CDS YP_002987479.1 242239298 8090460 complement(2217310..2218062) 1 NC_012880.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2218062 8090460 Dd703_1864 Dickeya dadantii Ech703 fumarate/nitrate reduction transcriptional regulator YP_002987479.1 2217310 R 579405 CDS YP_002987480.1 242239299 8090461 complement(2218224..2218763) 1 NC_012880.1 KEGG: eca:ECA2208 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 2218763 8090461 Dd703_1865 Dickeya dadantii Ech703 methylated-DNA--protein-cysteine methyltransferase YP_002987480.1 2218224 R 579405 CDS YP_002987481.1 242239300 8090462 complement(2219071..2221023) 1 NC_012880.1 PFAM: hypothetical protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: esa:ESA_00603 hypothetical protein; methyl-accepting chemotaxis sensory transducer 2221023 8090462 Dd703_1866 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987481.1 2219071 R 579405 CDS YP_002987482.1 242239301 8090463 complement(2221450..2222727) 1 NC_012880.1 PFAM: amine oxidase; KEGG: kpe:KPK_4913 amine oxidase flavin-containing; amine oxidase 2222727 8090463 Dd703_1867 Dickeya dadantii Ech703 amine oxidase YP_002987482.1 2221450 R 579405 CDS YP_002987483.1 242239302 8090464 complement(2222919..2223662) 1 NC_012880.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: kpe:KPK_4910 MerR family transcriptional regulator; MerR family transcriptional regulator 2223662 8090464 Dd703_1868 Dickeya dadantii Ech703 MerR family transcriptional regulator YP_002987483.1 2222919 R 579405 CDS YP_002987484.1 242239303 8090465 2223933..2224514 1 NC_012880.1 KEGG: eca:ECA2172 hypothetical protein; hypothetical protein 2224514 8090465 Dd703_1869 Dickeya dadantii Ech703 hypothetical protein YP_002987484.1 2223933 D 579405 CDS YP_002987485.1 242239304 8090466 complement(2224667..2225794) 1 NC_012880.1 PFAM: ROK family protein; KEGG: atc:AGR_L_609 hypothetical protein; ROK family protein 2225794 8090466 Dd703_1870 Dickeya dadantii Ech703 ROK family protein YP_002987485.1 2224667 R 579405 CDS YP_002987486.1 242239305 8090467 2226158..2227237 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: asu:Asuc_1528 ABC transporter; ABC transporter 2227237 8090467 Dd703_1871 Dickeya dadantii Ech703 ABC transporter YP_002987486.1 2226158 D 579405 CDS YP_002987487.1 242239306 8090468 2227234..2228094 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ypy:YPK_2169 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2228094 8090468 Dd703_1872 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987487.1 2227234 D 579405 CDS YP_002987488.1 242239307 8090469 2228091..2228927 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: asu:Asuc_1526 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2228927 8090469 Dd703_1873 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987488.1 2228091 D 579405 CDS YP_002987489.1 242239308 8090470 2228970..2230097 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: asu:Asuc_1525 extracellular solute-binding protein; family 1 extracellular solute-binding protein 2230097 8090470 Dd703_1874 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002987489.1 2228970 D 579405 CDS YP_002987490.1 242239309 8090471 2230189..2230953 1 NC_012880.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: psp:PSPPH_4534 glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2230953 8090471 Dd703_1875 Dickeya dadantii Ech703 glycerophosphoryl diester phosphodiesterase YP_002987490.1 2230189 D 579405 CDS YP_002987491.1 242239310 8090472 2230980..2231750 1 NC_012880.1 PFAM: inositol monophosphatase; KEGG: pst:PSPTO_0659 inositol monophosphatase family protein; inositol monophosphatase 2231750 8090472 Dd703_1876 Dickeya dadantii Ech703 inositol monophosphatase YP_002987491.1 2230980 D 579405 CDS YP_002987492.1 242239311 8090473 complement(2231823..2233382) 1 NC_012880.1 KEGG: rec:RHECIAT_PC0000667 hypothetical protein; hypothetical protein 2233382 8090473 Dd703_1877 Dickeya dadantii Ech703 hypothetical protein YP_002987492.1 2231823 R 579405 CDS YP_002987493.1 242239312 8090474 complement(2233668..2234144) 1 NC_012880.1 KEGG: smd:Smed_5988 hypothetical protein; hypothetical protein 2234144 8090474 Dd703_1878 Dickeya dadantii Ech703 hypothetical protein YP_002987493.1 2233668 R 579405 CDS YP_002987494.1 242239313 8090476 complement(2234780..2237278) 1 NC_012880.1 KEGG: eca:ECA2217 virulence factor; virulence factor 2237278 8090476 Dd703_1880 Dickeya dadantii Ech703 virulence factor YP_002987494.1 2234780 R 579405 CDS YP_002987495.1 242239314 8090477 complement(2237275..2240262) 1 NC_012880.1 PFAM: virulence protein SrfB; KEGG: eca:ECA2218 virulence effector protein; virulence protein SrfB 2240262 8090477 Dd703_1881 Dickeya dadantii Ech703 virulence protein SrfB YP_002987495.1 2237275 R 579405 CDS YP_002987496.1 242239315 8090478 complement(2240265..2241623) 1 NC_012880.1 KEGG: eca:ECA2219 virulence effector protein; virulence effector protein 2241623 8090478 Dd703_1882 Dickeya dadantii Ech703 virulence effector protein YP_002987496.1 2240265 R 579405 CDS YP_002987497.1 242239316 8090479 2242055..2242912 1 NC_012880.1 PFAM: NmrA family protein; KEGG: yen:YE1738 hypothetical protein; NmrA family protein 2242912 8090479 Dd703_1883 Dickeya dadantii Ech703 NmrA family protein YP_002987497.1 2242055 D 579405 CDS YP_002987498.1 242239317 8090480 complement(2243003..2243848) 1 NC_012880.1 KEGG: rso:RSc3165 hypothetical protein; hypothetical protein 2243848 8090480 Dd703_1884 Dickeya dadantii Ech703 hypothetical protein YP_002987498.1 2243003 R 579405 CDS YP_002987499.1 242239318 8090481 complement(2244207..2246075) 1 NC_012880.1 PFAM: K potassium transporter; KEGG: spe:Spro_2547 K potassium transporter; K potassium transporter 2246075 8090481 Dd703_1885 Dickeya dadantii Ech703 K potassium transporter YP_002987499.1 2244207 R 579405 CDS YP_002987500.1 242239319 8090482 2246680..2248035 1 NC_012880.1 KEGG: pat:Patl_1404 cellulase; PFAM: glycoside hydrolase family 5; carbohydrate-binding family V/XII; SMART: carbohydrate-binding family V/XII; cellulase 2248035 8090482 Dd703_1886 Dickeya dadantii Ech703 cellulase YP_002987500.1 2246680 D 579405 CDS YP_002987501.1 242239320 8090483 complement(2248196..2249476) 1 NC_012880.1 KEGG: sde:Sde_2946 hypothetical protein; hypothetical protein 2249476 8090483 Dd703_1887 Dickeya dadantii Ech703 hypothetical protein YP_002987501.1 2248196 R 579405 CDS YP_002987502.1 242239321 8090485 2251134..2251949 1 NC_012880.1 KEGG: spe:Spro_2341 mannosyl-3-phosphoglycerate phosphatase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase type 3; mannosyl-3-phosphoglycerate phosphatase family protein 2251949 8090485 Dd703_1889 Dickeya dadantii Ech703 mannosyl-3-phosphoglycerate phosphatase family protein YP_002987502.1 2251134 D 579405 CDS YP_002987503.1 242239322 8090486 2252008..2253237 1 NC_012880.1 KEGG: eca:ECA2249 hypothetical protein; hypothetical protein 2253237 8090486 Dd703_1890 Dickeya dadantii Ech703 hypothetical protein YP_002987503.1 2252008 D 579405 CDS YP_002987504.1 242239323 8090487 complement(2253326..2254093) 1 NC_012880.1 PFAM: methyltransferase type 11; methyltransferase small; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: kpn:KPN_00225 biotin synthesis protein; type 11 methyltransferase 2254093 8090487 Dd703_1891 Dickeya dadantii Ech703 type 11 methyltransferase YP_002987504.1 2253326 R 579405 CDS YP_002987505.1 242239324 8090488 2254286..2255476 1 NC_012880.1 PFAM: cytochrome P450; KEGG: xac:XAC3170 cytochrome P-450 hydroxylase; cytochrome P450 2255476 8090488 Dd703_1892 Dickeya dadantii Ech703 cytochrome P450 YP_002987505.1 2254286 D 579405 CDS YP_002987506.1 242239325 8090489 2255639..2256388 1 NC_012880.1 NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase 2256388 8090489 Dd703_1893 Dickeya dadantii Ech703 3-hydroxy acid dehydrogenase YP_002987506.1 2255639 D 579405 CDS YP_002987507.1 242239326 8090490 2256809..2257144 1 NC_012880.1 KEGG: eca:ECA2253 hypothetical protein; hypothetical protein 2257144 8090490 Dd703_1894 Dickeya dadantii Ech703 hypothetical protein YP_002987507.1 2256809 D 579405 CDS YP_002987508.1 242239327 8090491 complement(2257389..2258054) 1 NC_012880.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2258054 8090491 Dd703_1895 Dickeya dadantii Ech703 dithiobiotin synthetase YP_002987508.1 2257389 R 579405 CDS YP_002987509.1 242239328 8090492 complement(2258185..2259402) 1 NC_012880.1 PFAM: ROK family protein; KEGG: eca:ECA2258 transcriptional regulator; ROK family protein 2259402 8090492 Dd703_1896 Dickeya dadantii Ech703 ROK family protein YP_002987509.1 2258185 R 579405 CDS YP_002987510.1 242239329 8090493 complement(2259520..2260434) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2259 LysR family transcriptional regulator; LysR family transcriptional regulator 2260434 8090493 Dd703_1897 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987510.1 2259520 R 579405 CDS YP_002987511.1 242239330 8090494 2260542..2261816 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2281 major facilitator transporter; major facilitator superfamily protein 2261816 8090494 Dd703_1898 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987511.1 2260542 D 579405 CDS YP_002987512.1 242239331 8090496 2262051..2262974 1 NC_012880.1 binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein 2262974 8090496 Dd703_1900 Dickeya dadantii Ech703 DNA replication terminus site-binding protein YP_002987512.1 2262051 D 579405 CDS YP_002987513.1 242239332 8090497 complement(2262989..2264401) 1 NC_012880.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2264401 fumC 8090497 fumC Dickeya dadantii Ech703 fumarate hydratase YP_002987513.1 2262989 R 579405 CDS YP_002987514.1 242239333 8090498 2264580..2265764 1 NC_012880.1 KEGG: kpe:KPK_2944 mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 2265764 8090498 Dd703_1902 Dickeya dadantii Ech703 mannose-6-phosphate isomerase YP_002987514.1 2264580 D 579405 CDS YP_002987515.1 242239334 8090499 2265822..2267366 1 NC_012880.1 PFAM: protein of unknown function DUF945; KEGG: eca:ECA2264 hypothetical protein; hypothetical protein 2267366 8090499 Dd703_1903 Dickeya dadantii Ech703 hypothetical protein YP_002987515.1 2265822 D 579405 CDS YP_002987516.1 242239335 8090500 2267550..2268563 1 NC_012880.1 KEGG: eca:ECA2266 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 2268563 8090500 Dd703_1904 Dickeya dadantii Ech703 adenosine deaminase YP_002987516.1 2267550 D 579405 CDS YP_002987517.1 242239336 8090501 complement(2268638..2269096) 1 NC_012880.1 PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: eca:ECA2267 hypothetical protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein 2269096 8090501 Dd703_1905 Dickeya dadantii Ech703 calcium/calmodulin dependent protein kinase II association-domain-containing protein YP_002987517.1 2268638 R 579405 CDS YP_002987518.1 242239337 8090502 complement(2269245..2270240) 1 NC_012880.1 PFAM: sodium symporter; KEGG: eca:ECA2268 sodium bile acid symporter; sodium symporter 2270240 8090502 Dd703_1906 Dickeya dadantii Ech703 sodium symporter YP_002987518.1 2269245 R 579405 CDS YP_002987519.1 242239338 8090503 complement(2270546..2271292) 1 NC_012880.1 KEGG: cko:CKO_01579 hypothetical protein; hypothetical protein 2271292 8090503 Dd703_1907 Dickeya dadantii Ech703 hypothetical protein YP_002987519.1 2270546 R 579405 CDS YP_002987520.1 242239339 8090504 complement(2271401..2272450) 1 NC_012880.1 PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: eca:ECA2269 oxidoreductase; oxidoreductase 2272450 8090504 Dd703_1908 Dickeya dadantii Ech703 oxidoreductase YP_002987520.1 2271401 R 579405 CDS YP_002987521.1 242239340 8090505 complement(2272562..2273506) 1 NC_012880.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; AraC family transcriptional regulator 2273506 8090505 Dd703_1909 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002987521.1 2272562 R 579405 CDS YP_002987522.1 242239341 8090506 complement(2273622..2274608) 1 NC_012880.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2274608 araH 8090506 araH Dickeya dadantii Ech703 L-arabinose transporter permease YP_002987522.1 2273622 R 579405 CDS YP_002987523.1 242239342 8090507 complement(2274627..2276147) 1 NC_012880.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2276147 araG 8090507 araG Dickeya dadantii Ech703 L-arabinose transporter ATP-binding protein YP_002987523.1 2274627 R 579405 CDS YP_002987524.1 242239343 8090508 complement(2276323..2277306) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA2273 L-arabinose-binding periplasmic protein; periplasmic binding protein/LacI transcriptional regulator 2277306 8090508 Dd703_1912 Dickeya dadantii Ech703 periplasmic binding protein/LacI transcriptional regulator YP_002987524.1 2276323 R 579405 CDS YP_002987525.1 242239344 8090509 2277688..2279379 1 NC_012880.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2279379 8090509 Dd703_1913 Dickeya dadantii Ech703 ribulokinase YP_002987525.1 2277688 D 579405 CDS YP_002987526.1 242239345 8090510 2279431..2280939 1 NC_012880.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2280939 8090510 Dd703_1914 Dickeya dadantii Ech703 L-arabinose isomerase YP_002987526.1 2279431 D 579405 CDS YP_002987527.1 242239346 8090511 2281713..2281928 1 NC_012880.1 YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; oriC-binding nucleoid-associated protein 2281928 8090511 Dd703_1915 Dickeya dadantii Ech703 oriC-binding nucleoid-associated protein YP_002987527.1 2281713 D 579405 CDS YP_002987528.1 242239347 8090512 2282191..2282772 1 NC_012880.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: ypi:YpsIP31758_1894 Na(+)-translocating NADH-quinone reductase subunit E; RnfABCDGE type electron transport complex subunit alpha 2282772 8090512 Dd703_1916 Dickeya dadantii Ech703 RnfABCDGE type electron transport complex subunit alpha YP_002987528.1 2282191 D 579405 CDS YP_002987529.1 242239348 8090513 2282772..2283347 1 NC_012880.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 2283347 8090513 Dd703_1917 Dickeya dadantii Ech703 electron transport complex protein RnfB YP_002987529.1 2282772 D 579405 CDS YP_002987530.1 242239349 8090514 2283340..2285361 1 NC_012880.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2278 electron transport complex protein RnfC; RnfABCDGE type electron transport complex subunit C 2285361 8090514 Dd703_1918 Dickeya dadantii Ech703 RnfABCDGE type electron transport complex subunit C YP_002987530.1 2283340 D 579405 CDS YP_002987531.1 242239350 8090515 2285362..2286423 1 NC_012880.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: spe:Spro_2237 electron transport complex protein RnfD; RnfABCDGE type electron transport complex subunit D 2286423 8090515 Dd703_1919 Dickeya dadantii Ech703 RnfABCDGE type electron transport complex subunit D YP_002987531.1 2285362 D 579405 CDS YP_002987532.1 242239351 8090516 2286433..2287068 1 NC_012880.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2287068 8090516 Dd703_1920 Dickeya dadantii Ech703 electron transport complex protein RnfG YP_002987532.1 2286433 D 579405 CDS YP_002987533.1 242239352 8090517 2287065..2287760 1 NC_012880.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: yen:YE1988 SoxR-reducing system protein RsxE; RnfABCDGE type electron transport complex subunit E 2287760 8090517 Dd703_1921 Dickeya dadantii Ech703 RnfABCDGE type electron transport complex subunit E YP_002987533.1 2287065 D 579405 CDS YP_002987534.1 242239353 8090518 2287757..2288392 1 NC_012880.1 KEGG: kpe:KPK_2378 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 2288392 8090518 Dd703_1922 Dickeya dadantii Ech703 endonuclease III YP_002987534.1 2287757 D 579405 CDS YP_002987535.1 242239354 8090519 complement(2288506..2289480) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2656 transcriptional regulator CysB; LysR family transcriptional regulator 2289480 8090519 Dd703_1923 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987535.1 2288506 R 579405 CDS YP_002987536.1 242239355 8090520 complement(2289880..2292486) 1 NC_012880.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2292486 8090520 Dd703_1924 Dickeya dadantii Ech703 DNA topoisomerase I YP_002987536.1 2289880 R 579405 CDS YP_002987537.1 242239356 8090521 2292915..2293181 1 NC_012880.1 KEGG: eca:ECA2287 hypothetical protein; hypothetical protein 2293181 8090521 Dd703_1925 Dickeya dadantii Ech703 hypothetical protein YP_002987537.1 2292915 D 579405 CDS YP_002987538.1 242239357 8090522 complement(2293268..2294314) 1 NC_012880.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 2294314 8090522 Dd703_1926 Dickeya dadantii Ech703 periplasmic protease YP_002987538.1 2293268 R 579405 CDS YP_002987539.1 242239358 8090523 2294605..2295366 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_1926 short chain dehydrogenase; short chain dehydrogenase 2295366 8090523 Dd703_1927 Dickeya dadantii Ech703 short chain dehydrogenase YP_002987539.1 2294605 D 579405 CDS YP_002987540.1 242239359 8090524 2295390..2295980 1 NC_012880.1 KEGG: eca:ECA2290 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2295980 8090524 Dd703_1928 Dickeya dadantii Ech703 cob(I)alamin adenosyltransferase YP_002987540.1 2295390 D 579405 CDS YP_002987541.1 242239360 8090525 complement(2296032..2296901) 1 NC_012880.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 2296901 8090525 Dd703_1929 Dickeya dadantii Ech703 23S rRNA pseudouridylate synthase B YP_002987541.1 2296032 R 579405 CDS YP_002987542.1 242239361 8090526 complement(2297181..2297801) 1 NC_012880.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: spe:Spro_2665 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 2297801 8090526 Dd703_1930 Dickeya dadantii Ech703 Sua5/YciO/YrdC/YwlC family protein YP_002987542.1 2297181 R 579405 CDS YP_002987543.1 242239362 8090527 complement(2297885..2298778) 1 NC_012880.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: eca:ECA2293 phosphoesterase; PHP domain-containing protein 2298778 8090527 Dd703_1931 Dickeya dadantii Ech703 PHP domain-containing protein YP_002987543.1 2297885 R 579405 CDS YP_002987544.1 242239363 8090528 2299181..2300743 1 NC_012880.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2300743 8090528 Dd703_1932 Dickeya dadantii Ech703 anthranilate synthase component I YP_002987544.1 2299181 D 579405 CDS YP_002987545.1 242239364 8090529 2300743..2301321 1 NC_012880.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2301321 8090529 Dd703_1933 Dickeya dadantii Ech703 anthranilate synthase component II YP_002987545.1 2300743 D 579405 CDS YP_002987546.1 242239365 8090530 2301336..2302334 1 NC_012880.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2302334 trpD 8090530 trpD Dickeya dadantii Ech703 anthranilate phosphoribosyltransferase YP_002987546.1 2301336 D 579405 CDS YP_002987547.1 242239366 8090531 2302342..2303727 1 NC_012880.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2303727 8090531 Dd703_1935 Dickeya dadantii Ech703 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_002987547.1 2302342 D 579405 CDS YP_002987548.1 242239367 8090532 2303744..2304934 1 NC_012880.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2304934 8090532 Dd703_1936 Dickeya dadantii Ech703 tryptophan synthase subunit beta YP_002987548.1 2303744 D 579405 CDS YP_002987549.1 242239368 8090533 2304934..2305743 1 NC_012880.1 TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain; KEGG: spe:Spro_2672 tryptophan synthase, subunit alpha; tryptophan synthase subunit alpha 2305743 8090533 Dd703_1937 Dickeya dadantii Ech703 tryptophan synthase subunit alpha YP_002987549.1 2304934 D 579405 CDS YP_002987550.1 242239369 8090534 2306290..2307018 1 NC_012880.1 PFAM: oligogalacturonate-specific porin; KEGG: eca:ECA2407 oligogalacturonate-specific porin; oligogalacturonate-specific porin 2307018 8090534 Dd703_1938 Dickeya dadantii Ech703 oligogalacturonate-specific porin YP_002987550.1 2306290 D 579405 CDS YP_002987551.1 242239370 8090535 complement(2307251..2307883) 1 NC_012880.1 receptor for colicin S4; outer membrane protein W 2307883 8090535 Dd703_1939 Dickeya dadantii Ech703 outer membrane protein W YP_002987551.1 2307251 R 579405 CDS YP_002987552.1 242239371 8090536 2308167..2308529 1 NC_012880.1 PFAM: protein of unknown function UPF0153; KEGG: esa:ESA_01555 hypothetical protein; hypothetical protein 2308529 8090536 Dd703_1940 Dickeya dadantii Ech703 hypothetical protein YP_002987552.1 2308167 D 579405 CDS YP_002987553.1 242239372 8090537 2308638..2309390 1 NC_012880.1 PFAM: protein of unknown function UPF0259; KEGG: eca:ECA2305 hypothetical protein; hypothetical protein 2309390 8090537 Dd703_1941 Dickeya dadantii Ech703 hypothetical protein YP_002987553.1 2308638 D 579405 CDS YP_002987554.1 242239373 8090538 2309572..2310132 1 NC_012880.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: eca:ECA2313 intracellular septation protein A; intracellular septation protein A 2310132 8090538 Dd703_1942 Dickeya dadantii Ech703 intracellular septation protein A YP_002987554.1 2309572 D 579405 CDS YP_002987555.1 242239374 8090539 2310186..2310605 1 NC_012880.1 YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase 2310605 8090539 Dd703_1943 Dickeya dadantii Ech703 acyl-CoA thioester hydrolase YP_002987555.1 2310186 D 579405 CDS YP_002987556.1 242239375 8090540 complement(2310671..2311387) 1 NC_012880.1 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transporter TonB 2311387 8090540 Dd703_1944 Dickeya dadantii Ech703 transporter TonB YP_002987556.1 2310671 R 579405 CDS YP_002987557.1 242239376 8090541 2311591..2311887 1 NC_012880.1 PFAM: YCII-related; KEGG: cko:CKO_01328 YciI-like protein; hypothetical protein 2311887 8090541 Dd703_1945 Dickeya dadantii Ech703 hypothetical protein YP_002987557.1 2311591 D 579405 CDS YP_002987558.1 242239377 8090542 2312158..2313897 1 NC_012880.1 PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA2317 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2313897 8090542 Dd703_1946 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987558.1 2312158 D 579405 CDS YP_002987559.1 242239378 8090543 complement(2313964..2314140) 1 NC_012880.1 KEGG: ypi:YpsIP31758_1952 hypothetical protein; hypothetical protein 2314140 8090543 Dd703_1947 Dickeya dadantii Ech703 hypothetical protein YP_002987559.1 2313964 R 579405 CDS YP_002987560.1 242239379 8090544 2314347..2315807 1 NC_012880.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2315807 cls 8090544 cls Dickeya dadantii Ech703 cardiolipin synthetase YP_002987560.1 2314347 D 579405 CDS YP_002987561.1 242239380 8090545 2315862..2316185 1 NC_012880.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 2316185 8090545 Dd703_1949 Dickeya dadantii Ech703 dsDNA-mimic protein YP_002987561.1 2315862 D 579405 CDS YP_002987562.1 242239381 8090546 complement(2316273..2317277) 1 NC_012880.1 KEGG: spe:Spro_2697 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 2317277 8090546 Dd703_1950 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002987562.1 2316273 R 579405 CDS YP_002987563.1 242239382 8090547 complement(2317274..2318263) 1 NC_012880.1 KEGG: ect:ECIAI39_1581 oligopeptide transporter subunit ; ATP-binding component of ABC superfamily; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; oligopeptide ABC transporter ATP-binding protein 2318263 oppD 8090547 oppD Dickeya dadantii Ech703 oligopeptide ABC transporter ATP-binding protein YP_002987563.1 2317274 R 579405 CDS YP_002987564.1 242239383 8090548 complement(2318279..2319187) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: yen:YE2231 oligopeptide transporter permease protein; binding-protein-dependent transporters inner membrane component 2319187 8090548 Dd703_1952 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987564.1 2318279 R 579405 CDS YP_002987565.1 242239384 8090549 complement(2319200..2320120) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2323 oligopeptide transporter permease; oligopeptide transporter permease 2320120 oppB 8090549 oppB Dickeya dadantii Ech703 oligopeptide transporter permease YP_002987565.1 2319200 R 579405 CDS YP_002987566.1 242239385 8090550 complement(2320418..2322061) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2324 periplasmic oligopeptide-binding protein; family 5 extracellular solute-binding protein 2322061 8090550 Dd703_1954 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987566.1 2320418 R 579405 CDS YP_002987567.1 242239386 8090551 2323714..2326419 1 NC_012880.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: eca:ECA2326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2326419 8090551 Dd703_1955 Dickeya dadantii Ech703 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_002987567.1 2323714 D 579405 CDS YP_002987568.1 242239387 8090552 complement(2327432..2328028) 1 NC_012880.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2328028 8090552 Dd703_1956 Dickeya dadantii Ech703 thymidine kinase YP_002987568.1 2327432 R 579405 CDS YP_002987569.1 242239388 8090553 2328406..2328813 1 NC_012880.1 PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA2328 global DNA-binding transcriptional dual regulator H-NS; histone family protein nucleoid-structuring protein H-NS 2328813 8090553 Dd703_1957 Dickeya dadantii Ech703 histone family protein nucleoid-structuring protein H-NS YP_002987569.1 2328406 D 579405 CDS YP_002987570.1 242239389 8090554 complement(2328924..2329835) 1 NC_012880.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 2329835 8090554 Dd703_1958 Dickeya dadantii Ech703 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_002987570.1 2328924 R 579405 CDS YP_002987571.1 242239390 8090555 complement(2330026..2331042) 1 NC_012880.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA2330 response regulator of RpoS; response regulator of RpoS 2331042 8090555 Dd703_1959 Dickeya dadantii Ech703 response regulator of RpoS YP_002987571.1 2330026 R 579405 CDS YP_002987572.1 242239391 8090556 complement(2331092..2331994) 1 NC_012880.1 PFAM: patatin; KEGG: eca:ECA2331 hypothetical protein; hypothetical protein 2331994 8090556 Dd703_1960 Dickeya dadantii Ech703 hypothetical protein YP_002987572.1 2331092 R 579405 CDS YP_002987573.1 242239392 8090557 2332121..2332588 1 NC_012880.1 PFAM: SEC-C motif domain protein; KEGG: eca:ECA2332 hypothetical protein; hypothetical protein 2332588 8090557 Dd703_1961 Dickeya dadantii Ech703 hypothetical protein YP_002987573.1 2332121 D 579405 CDS YP_002987574.1 242239393 8090558 2332661..2333509 1 NC_012880.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2333509 purU 8090558 purU Dickeya dadantii Ech703 formyltetrahydrofolate deformylase YP_002987574.1 2332661 D 579405 CDS YP_002987575.1 242239394 8090560 complement(2333890..2334510) 1 NC_012880.1 PFAM: protein of unknown function UPF0126; KEGG: eca:ECA2334 hypothetical protein; hypothetical protein 2334510 8090560 Dd703_1963 Dickeya dadantii Ech703 hypothetical protein YP_002987575.1 2333890 R 579405 CDS YP_002987576.1 242239395 8090561 2334874..2335680 1 NC_012880.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: ypi:YpsIP31758_1976 exonuclease III; exodeoxyribonuclease III 2335680 8090561 Dd703_1964 Dickeya dadantii Ech703 exodeoxyribonuclease III YP_002987576.1 2334874 D 579405 CDS YP_002987577.1 242239396 8090562 complement(2335737..2336081) 1 NC_012880.1 PFAM: protein of unknown function DUF1496; KEGG: eca:ECA2336 hypothetical protein; hypothetical protein 2336081 8090562 Dd703_1965 Dickeya dadantii Ech703 hypothetical protein YP_002987577.1 2335737 R 579405 CDS YP_002987578.1 242239397 8090563 complement(2336078..2338000) 1 NC_012880.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 2338000 8090563 Dd703_1966 Dickeya dadantii Ech703 DNA topoisomerase III YP_002987578.1 2336078 R 579405 CDS YP_002987579.1 242239398 8090564 complement(2338089..2338640) 1 NC_012880.1 PFAM: nitroreductase; KEGG: eca:ECA2338 hypothetical protein; hypothetical protein 2338640 8090564 Dd703_1967 Dickeya dadantii Ech703 hypothetical protein YP_002987579.1 2338089 R 579405 CDS YP_002987580.1 242239399 8090565 2338822..2340675 1 NC_012880.1 TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: eca:ECA2339 protease 4; signal peptide peptidase SppA, 67K type 2340675 8090565 Dd703_1968 Dickeya dadantii Ech703 signal peptide peptidase SppA, 67K type YP_002987580.1 2338822 D 579405 CDS YP_002987581.1 242239400 8090566 2340761..2341780 1 NC_012880.1 converts asparagine to aspartate and ammonia; asparaginase 2341780 ansA 8090566 ansA Dickeya dadantii Ech703 asparaginase YP_002987581.1 2340761 D 579405 CDS YP_002987582.1 242239401 8090567 2341823..2342461 1 NC_012880.1 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 2342461 8090567 Dd703_1970 Dickeya dadantii Ech703 nicotinamidase/pyrazinamidase YP_002987582.1 2341823 D 579405 CDS YP_002987583.1 242239402 8090568 complement(2342609..2342878) 1 NC_012880.1 PFAM: protein of unknown function DUF1315; KEGG: ypi:YpsIP31758_1985 hypothetical protein; hypothetical protein 2342878 8090568 Dd703_1971 Dickeya dadantii Ech703 hypothetical protein YP_002987583.1 2342609 R 579405 CDS YP_002987584.1 242239403 8090569 complement(2342943..2343413) 1 NC_012880.1 KEGG: ypi:YpsIP31758_1986 methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2343413 8090569 Dd703_1972 Dickeya dadantii Ech703 methionine-R-sulfoxide reductase YP_002987584.1 2342943 R 579405 CDS YP_002987585.1 242239404 8090570 2343710..2344705 1 NC_012880.1 KEGG: ypy:YPK_2096 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2344705 8090570 Dd703_1973 Dickeya dadantii Ech703 glyceraldehyde-3-phosphate dehydrogenase YP_002987585.1 2343710 D 579405 CDS YP_002987586.1 242239405 8090571 2344802..2345674 1 NC_012880.1 PFAM: aldose 1-epimerase; KEGG: eca:ECA2345 aldose 1-epimerase; aldose 1-epimerase 2345674 8090571 Dd703_1974 Dickeya dadantii Ech703 aldose 1-epimerase YP_002987586.1 2344802 D 579405 CDS YP_002987587.1 242239406 8090572 complement(2345728..2346582) 1 NC_012880.1 PFAM: aldo/keto reductase; KEGG: eca:ECA2346 aldo/keto reductase; aldo/keto reductase 2346582 8090572 Dd703_1975 Dickeya dadantii Ech703 aldo/keto reductase YP_002987587.1 2345728 R 579405 CDS YP_002987588.1 242239407 8090573 complement(2346701..2347450) 1 NC_012880.1 PFAM: MltA-interacting MipA family protein; KEGG: eca:ECA2347 MltA-interacting protein; MltA-interacting MipA family protein 2347450 8090573 Dd703_1976 Dickeya dadantii Ech703 MltA-interacting MipA family protein YP_002987588.1 2346701 R 579405 CDS YP_002987589.1 242239408 8090574 2347911..2349845 1 NC_012880.1 PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: eca:ECA2348 hypothetical protein; serine protein kinase PrkA 2349845 8090574 Dd703_1977 Dickeya dadantii Ech703 serine protein kinase PrkA YP_002987589.1 2347911 D 579405 CDS YP_002987590.1 242239409 8090575 2349883..2351160 1 NC_012880.1 PFAM: protein of unknown function DUF444; KEGG: spq:SPAB_02064 hypothetical protein; hypothetical protein 2351160 8090575 Dd703_1978 Dickeya dadantii Ech703 hypothetical protein YP_002987590.1 2349883 D 579405 CDS YP_002987591.1 242239410 8090576 complement(2351209..2351877) 1 NC_012880.1 PFAM: metallophosphoesterase; KEGG: ecd:ECDH10B_1335 serine/threonine-protein phosphatase; bis(5'-nucleosyl)-tetraphosphatase 2351877 8090576 Dd703_1979 Dickeya dadantii Ech703 bis(5'-nucleosyl)-tetraphosphatase YP_002987591.1 2351209 R 579405 CDS YP_002987592.1 242239411 8090577 2352090..2352503 1 NC_012880.1 KEGG: har:HEAR1364 hypothetical protein; hypothetical protein 2352503 8090577 Dd703_1980 Dickeya dadantii Ech703 hypothetical protein YP_002987592.1 2352090 D 579405 CDS YP_002987593.1 242239412 8090578 complement(2352585..2353835) 1 NC_012880.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2353835 8090578 Dd703_1981 Dickeya dadantii Ech703 D-amino acid dehydrogenase small subunit YP_002987593.1 2352585 R 579405 CDS YP_002987594.1 242239413 8090579 2354125..2355660 1 NC_012880.1 PFAM: SpoVR family protein; KEGG: eca:ECA2359 hypothetical protein; SpoVR family protein 2355660 8090579 Dd703_1982 Dickeya dadantii Ech703 SpoVR family protein YP_002987594.1 2354125 D 579405 CDS YP_002987595.1 242239414 8090580 complement(2355712..2356431) 1 NC_012880.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2356431 8090580 Dd703_1983 Dickeya dadantii Ech703 fatty acid metabolism regulator YP_002987595.1 2355712 R 579405 CDS YP_002987596.1 242239415 8090581 2356663..2358237 1 NC_012880.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 2358237 nhaB 8090581 nhaB Dickeya dadantii Ech703 sodium/proton antiporter YP_002987596.1 2356663 D 579405 CDS YP_002987597.1 242239416 8090582 2358435..2358965 1 NC_012880.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 2358965 8090582 Dd703_1985 Dickeya dadantii Ech703 disulfide bond formation protein B YP_002987597.1 2358435 D 579405 CDS YP_002987598.1 242239417 8090583 complement(2358987..2359160) 1 NC_012880.1 hypothetical protein 2359160 8090583 Dd703_1986 Dickeya dadantii Ech703 hypothetical protein YP_002987598.1 2358987 R 579405 CDS YP_002987599.1 242239418 8090584 complement(2359468..2359779) 1 NC_012880.1 PFAM: plasmid stabilization system; KEGG: spe:Spro_4208 plasmid stabilization system protein; plasmid stabilization system 2359779 8090584 Dd703_1987 Dickeya dadantii Ech703 plasmid stabilization system YP_002987599.1 2359468 R 579405 CDS YP_002987600.1 242239419 8090585 complement(2359776..2360039) 1 NC_012880.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: ecm:EcSMS35_3216 addiction module antidote protein, CC2985 family; CopG/Arc/MetJ family addiction module antidote protein 2360039 8090585 Dd703_1988 Dickeya dadantii Ech703 CopG/Arc/MetJ family addiction module antidote protein YP_002987600.1 2359776 R 579405 CDS YP_002987601.1 242239420 8090586 complement(2360145..2360363) 1 NC_012880.1 hypothetical protein 2360363 8090586 Dd703_1989 Dickeya dadantii Ech703 hypothetical protein YP_002987601.1 2360145 R 579405 CDS YP_002987602.1 242239421 8090587 2360404..2360616 1 NC_012880.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3380 hypothetical protein; hypothetical protein 2360616 8090587 Dd703_1990 Dickeya dadantii Ech703 hypothetical protein YP_002987602.1 2360404 D 579405 CDS YP_002987603.1 242239422 8090588 complement(2361305..2361565) 1 NC_012880.1 KEGG: plu:plu1132 hypothetical protein; hypothetical protein 2361565 8090588 Dd703_1991 Dickeya dadantii Ech703 hypothetical protein YP_002987603.1 2361305 R 579405 CDS YP_002987604.1 242239423 8090589 complement(2361562..2362374) 1 NC_012880.1 KEGG: plu:plu1352 hypothetical protein; hypothetical protein 2362374 8090589 Dd703_1992 Dickeya dadantii Ech703 hypothetical protein YP_002987604.1 2361562 R 579405 CDS YP_002987605.1 242239424 8090590 2362471..2363067 1 NC_012880.1 KEGG: plu:plu3694 hypothetical protein; hypothetical protein 2363067 8090590 Dd703_1993 Dickeya dadantii Ech703 hypothetical protein YP_002987605.1 2362471 D 579405 CDS YP_002987606.1 242239425 8090591 complement(2363313..2363645) 1 NC_012880.1 PFAM: plasmid stabilization system; KEGG: eca:ECA1466 hypothetical protein; plasmid stabilization system 2363645 8090591 Dd703_1994 Dickeya dadantii Ech703 plasmid stabilization system YP_002987606.1 2363313 R 579405 CDS YP_002987607.1 242239426 8090592 complement(2363645..2363923) 1 NC_012880.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: eca:ECA1467 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 2363923 8090592 Dd703_1995 Dickeya dadantii Ech703 CopG/Arc/MetJ family addiction module antidote protein YP_002987607.1 2363645 R 579405 CDS YP_002987608.1 242239427 8090593 complement(2363956..2365056) 1 NC_012880.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2365056 xerC 8090593 xerC Dickeya dadantii Ech703 site-specific tyrosine recombinase XerC YP_002987608.1 2363956 R 579405 CDS YP_002987609.1 242239428 8090594 complement(2365043..2368303) 1 NC_012880.1 PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; KEGG: plu:plu3714 hypothetical protein; zinc finger CHC2-family protein 2368303 8090594 Dd703_1997 Dickeya dadantii Ech703 zinc finger CHC2-family protein YP_002987609.1 2365043 R 579405 CDS YP_002987610.1 242239429 8090595 2368459..2368854 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu1146 hypothetical protein; XRE family transcriptional regulator 2368854 8090595 Dd703_1998 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002987610.1 2368459 D 579405 CDS YP_002987611.1 242239430 8090596 2368940..2369227 1 NC_012880.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3380 hypothetical protein; hypothetical protein 2369227 8090596 Dd703_1999 Dickeya dadantii Ech703 hypothetical protein YP_002987611.1 2368940 D 579405 CDS YP_002987612.1 242239431 8090597 complement(2369469..2369813) 1 NC_012880.1 KEGG: plu:plu3717 hypothetical protein; hypothetical protein 2369813 8090597 Dd703_2000 Dickeya dadantii Ech703 hypothetical protein YP_002987612.1 2369469 R 579405 CDS YP_002987613.1 242239432 8090598 complement(2369819..2381407) 1 NC_012880.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin KEGG: ent:Ent638_0053 filamentous haemagglutinin outer membrane protein; filamentous hemagglutinin family outer membrane protein 2381407 8090598 Dd703_2001 Dickeya dadantii Ech703 filamentous hemagglutinin family outer membrane protein YP_002987613.1 2369819 R 579405 CDS YP_002987614.1 242239433 8090599 complement(2381695..2383344) 1 NC_012880.1 PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: eca:ECA2116 hemolysin activator protein; polypeptide-transport-associated domain-containing protein 2383344 8090599 Dd703_2002 Dickeya dadantii Ech703 polypeptide-transport-associated domain-containing protein YP_002987614.1 2381695 R 579405 CDS YP_002987615.1 242239434 8090600 complement(2383948..2384394) 1 NC_012880.1 PFAM: protein of unknown function UPF0153; KEGG: eca:ECA2365 hypothetical protein; hypothetical protein 2384394 8090600 Dd703_2003 Dickeya dadantii Ech703 hypothetical protein YP_002987615.1 2383948 R 579405 CDS YP_002987616.1 242239435 8090601 complement(2384519..2385175) 1 NC_012880.1 PFAM: fumarylacetoacetate hydrolase; KEGG: eca:ECA2366 hypothetical protein; hypothetical protein 2385175 8090601 Dd703_2004 Dickeya dadantii Ech703 hypothetical protein YP_002987616.1 2384519 R 579405 CDS YP_002987617.1 242239436 8090602 complement(2385590..2385883) 1 NC_012880.1 PFAM: protein of unknown function DUF709; KEGG: set:SEN1224 hypothetical protein; hypothetical protein 2385883 8090602 Dd703_2005 Dickeya dadantii Ech703 hypothetical protein YP_002987617.1 2385590 R 579405 CDS YP_002987618.1 242239437 8090603 2386020..2386697 1 NC_012880.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 2386697 minC 8090603 minC Dickeya dadantii Ech703 septum formation inhibitor YP_002987618.1 2386020 D 579405 CDS YP_002987619.1 242239438 8090604 2386719..2387531 1 NC_012880.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD 2387531 8090604 Dd703_2007 Dickeya dadantii Ech703 cell division inhibitor MinD YP_002987619.1 2386719 D 579405 CDS YP_002987620.1 242239439 8090605 2387535..2387819 1 NC_012880.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 2387819 minE 8090605 minE Dickeya dadantii Ech703 cell division topological specificity factor MinE YP_002987620.1 2387535 D 579405 CDS YP_002987621.1 242239440 8090606 complement(2387864..2389075) 1 NC_012880.1 KEGG: eca:ECA2371 ribonuclease D; TIGRFAM: ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; ribonuclease D 2389075 8090606 Dd703_2009 Dickeya dadantii Ech703 ribonuclease D YP_002987621.1 2387864 R 579405 CDS YP_002987622.1 242239441 8090607 complement(2389200..2390909) 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA2372 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 2390909 8090607 Dd703_2010 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002987622.1 2389200 R 579405 CDS YP_002987623.1 242239442 8090608 complement(2391101..2391718) 1 NC_012880.1 TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; KEGG: eca:ECA2373 outer membrane lipoprotein; outer membrane lipoprotein, Slp family 2391718 8090608 Dd703_2011 Dickeya dadantii Ech703 outer membrane lipoprotein, Slp family YP_002987623.1 2391101 R 579405 CDS YP_002987624.1 242239443 8090609 complement(2391801..2392502) 1 NC_012880.1 PFAM: peptidase M22 glycoprotease; KEGG: eca:ECA2374 hypothetical protein; peptidase M22 glycoprotease 2392502 8090609 Dd703_2012 Dickeya dadantii Ech703 peptidase M22 glycoprotease YP_002987624.1 2391801 R 579405 CDS YP_002987625.1 242239444 8090610 complement(2392565..2394484) 1 NC_012880.1 SMART: helicase c2; DEAD-like helicase; KEGG: eca:ECA2375 ATP-dependent helicase; helicase c2 2394484 8090610 Dd703_2013 Dickeya dadantii Ech703 helicase c2 YP_002987625.1 2392565 R 579405 CDS YP_002987626.1 242239445 8090611 2394547..2394669 1 NC_012880.1 hypothetical protein 2394669 8090611 Dd703_2014 Dickeya dadantii Ech703 hypothetical protein YP_002987626.1 2394547 D 579405 CDS YP_002987627.1 242239446 8090612 2394681..2395031 1 NC_012880.1 PFAM: endoribonuclease L-PSP; KEGG: eca:ECA2376 endoribonuclease; endoribonuclease L-PSP 2395031 8090612 Dd703_2015 Dickeya dadantii Ech703 endoribonuclease L-PSP YP_002987627.1 2394681 D 579405 CDS YP_002987628.1 242239447 8090613 complement(2395049..2395234) 1 NC_012880.1 PFAM: protein of unknown function UPF0181; KEGG: eum:ECUMN_2103 hypothetical protein; hypothetical protein 2395234 8090613 Dd703_2016 Dickeya dadantii Ech703 hypothetical protein YP_002987628.1 2395049 R 579405 CDS YP_002987629.1 242239448 8090614 2395380..2396738 1 NC_012880.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: chorismate binding-like; anthranilate synthase component I domain protein; KEGG: yen:YE1781 para-aminobenzoate synthase component I; para-aminobenzoate synthase subunit I 2396738 8090614 Dd703_2017 Dickeya dadantii Ech703 para-aminobenzoate synthase subunit I YP_002987629.1 2395380 D 579405 CDS YP_002987630.1 242239449 8090615 2396869..2397480 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA2379 hypothetical protein; hypothetical protein 2397480 8090615 Dd703_2018 Dickeya dadantii Ech703 hypothetical protein YP_002987630.1 2396869 D 579405 CDS YP_002987631.1 242239450 8090616 2397676..2399040 1 NC_012880.1 KEGG: eca:ECA2380 L-serine dehydratase; TIGRFAM: L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 2399040 8090616 Dd703_2019 Dickeya dadantii Ech703 L-serine dehydratase YP_002987631.1 2397676 D 579405 CDS YP_002987632.1 242239451 8090617 complement(2399205..2400758) 1 NC_012880.1 PFAM: integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: eca:ECA2384 hypothetical protein; integral membrane protein TerC 2400758 8090617 Dd703_2020 Dickeya dadantii Ech703 integral membrane protein TerC YP_002987632.1 2399205 R 579405 CDS YP_002987633.1 242239452 8090618 2401363..2402304 1 NC_012880.1 KEGG: eca:ECA2385 PTS system, mannose-specific IIAB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIsubunit beta; PTS system, mannose/fructose/sorbose family, IIsubunit alpha; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; PTS system mannose/fructose/sorbose family transporter subunit IIB 2402304 8090618 Dd703_2021 Dickeya dadantii Ech703 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_002987633.1 2401363 D 579405 CDS YP_002987634.1 242239453 8090619 2402374..2403171 1 NC_012880.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: eca:ECA2386 PTS system, mannose-specific IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC 2403171 8090619 Dd703_2022 Dickeya dadantii Ech703 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_002987634.1 2402374 D 579405 CDS YP_002987635.1 242239454 8090620 2403185..2404024 1 NC_012880.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 2404024 8090620 Dd703_2023 Dickeya dadantii Ech703 PTS system mannose-specific transporter subunit IID YP_002987635.1 2403185 D 579405 CDS YP_002987636.1 242239455 8090621 2404101..2404559 1 NC_012880.1 PFAM: protein of unknown function DUF986; KEGG: eca:ECA2388 hypothetical protein; hypothetical protein 2404559 8090621 Dd703_2024 Dickeya dadantii Ech703 hypothetical protein YP_002987636.1 2404101 D 579405 CDS YP_002987637.1 242239456 8090622 2404943..2405515 1 NC_012880.1 PFAM: protein of unknown function DUF204; KEGG: eca:ECA2389 hypothetical protein; hypothetical protein 2405515 8090622 Dd703_2025 Dickeya dadantii Ech703 hypothetical protein YP_002987637.1 2404943 D 579405 CDS YP_002987638.1 242239457 8090623 complement(2405561..2406385) 1 NC_012880.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: eca:ECA2390 23S rRNA methyltransferase A; rRNA (guanine-N(1)-)-methyltransferase 2406385 8090623 Dd703_2026 Dickeya dadantii Ech703 rRNA (guanine-N(1)-)-methyltransferase YP_002987638.1 2405561 R 579405 CDS YP_002987639.1 242239458 8090624 complement(2406465..2406674) 1 NC_012880.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eca:ECA2391 cold shock-like protein CspC; cold shock-like protein CspC 2406674 8090624 Dd703_2027 Dickeya dadantii Ech703 cold shock-like protein CspC YP_002987639.1 2406465 R 579405 CDS YP_002987640.1 242239459 8090625 2407983..2408843 1 NC_012880.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: eca:ECA2396 fructosamine kinase; fructosamine kinase 2408843 8090625 Dd703_2028 Dickeya dadantii Ech703 fructosamine kinase YP_002987640.1 2407983 D 579405 CDS YP_002987641.1 242239460 8090626 complement(2408893..2409441) 1 NC_012880.1 KEGG: eca:ECA2397 hypothetical protein; hypothetical protein 2409441 8090626 Dd703_2029 Dickeya dadantii Ech703 hypothetical protein YP_002987641.1 2408893 R 579405 CDS YP_002987642.1 242239461 8090627 complement(2409688..2410020) 1 NC_012880.1 PFAM: cupin; KEGG: eca:ECA2399 pectin degradation protein; cupin 2410020 8090627 Dd703_2030 Dickeya dadantii Ech703 cupin YP_002987642.1 2409688 R 579405 CDS YP_002987643.1 242239462 8090628 2410341..2411177 1 NC_012880.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2411177 8090628 Dd703_2031 Dickeya dadantii Ech703 5-keto-4-deoxyuronate isomerase YP_002987643.1 2410341 D 579405 CDS YP_002987644.1 242239463 8090629 2411257..2412018 1 NC_012880.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 2412018 8090629 Dd703_2032 Dickeya dadantii Ech703 2-deoxy-D-gluconate 3-dehydrogenase YP_002987644.1 2411257 D 579405 CDS YP_002987645.1 242239464 8090630 2412277..2413908 1 NC_012880.1 PFAM: periplasmic pectate lyase; KEGG: eca:ECA2402 pectate disaccharide-lyase; Pectate disaccharide-lyase 2413908 8090630 Dd703_2033 Dickeya dadantii Ech703 Pectate disaccharide-lyase YP_002987645.1 2412277 D 579405 CDS YP_002987646.1 242239465 8090631 2413955..2414845 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2403 binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transporters inner membrane component 2414845 8090631 Dd703_2034 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987646.1 2413955 D 579405 CDS YP_002987647.1 242239466 8090632 2414838..2415740 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ent:Ent638_3290 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2415740 8090632 Dd703_2035 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987647.1 2414838 D 579405 CDS YP_002987648.1 242239467 8090633 2415754..2416881 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: eca:ECA2405 ABC transporter ATP-binding component; ABC transporter 2416881 8090633 Dd703_2036 Dickeya dadantii Ech703 ABC transporter YP_002987648.1 2415754 D 579405 CDS YP_002987649.1 242239468 8090634 2416897..2418189 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein; family 1 extracellular solute-binding protein 2418189 8090634 Dd703_2037 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002987649.1 2416897 D 579405 CDS YP_002987650.1 242239469 8090635 2418639..2419352 1 NC_012880.1 PFAM: oligogalacturonate-specific porin; KEGG: eca:ECA2407 oligogalacturonate-specific porin; oligogalacturonate-specific porin 2419352 8090635 Dd703_2038 Dickeya dadantii Ech703 oligogalacturonate-specific porin YP_002987650.1 2418639 D 579405 CDS YP_002987651.1 242239470 8090636 2419558..2420502 1 NC_012880.1 KEGG: eca:ECA2408 pectin acetylesterase; pectin acetylesterase 2420502 8090636 Dd703_2039 Dickeya dadantii Ech703 pectin acetylesterase YP_002987651.1 2419558 D 579405 CDS YP_002987652.1 242239471 8090638 2421390..2422781 1 NC_012880.1 PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA2410 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 2422781 8090638 Dd703_2041 Dickeya dadantii Ech703 sodium:dicarboxylate symporter YP_002987652.1 2421390 D 579405 CDS YP_002987653.1 242239472 8090639 complement(2422834..2423166) 1 NC_012880.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE 2423166 8090639 Dd703_2042 Dickeya dadantii Ech703 DNA-binding transcriptional activator OsmE YP_002987653.1 2422834 R 579405 CDS YP_002987654.1 242239473 8090640 2423319..2423531 1 NC_012880.1 hypothetical protein 2423531 8090640 Dd703_2043 Dickeya dadantii Ech703 hypothetical protein YP_002987654.1 2423319 D 579405 CDS YP_002987655.1 242239474 8090641 2423492..2424313 1 NC_012880.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2424313 nadE 8090641 nadE Dickeya dadantii Ech703 NAD synthetase YP_002987655.1 2423492 D 579405 CDS YP_002987656.1 242239475 8090642 2424393..2425280 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2413 hypothetical protein; hypothetical protein 2425280 8090642 Dd703_2045 Dickeya dadantii Ech703 hypothetical protein YP_002987656.1 2424393 D 579405 CDS YP_002987657.1 242239476 8090643 2425330..2425725 1 NC_012880.1 KEGG: eca:ECA2415 hypothetical protein; hypothetical protein 2425725 8090643 Dd703_2046 Dickeya dadantii Ech703 hypothetical protein YP_002987657.1 2425330 D 579405 CDS YP_002987658.1 242239477 8090644 complement(2426088..2426387) 1 NC_012880.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2426387 ihfA 8090644 ihfA Dickeya dadantii Ech703 integration host factor subunit alpha YP_002987658.1 2426088 R 579405 CDS YP_002987659.1 242239478 8090645 complement(2426392..2428779) 1 NC_012880.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2428779 pheT 8090645 pheT Dickeya dadantii Ech703 phenylalanyl-tRNA synthetase subunit beta YP_002987659.1 2426392 R 579405 CDS YP_002987660.1 242239479 8090646 complement(2428794..2429777) 1 NC_012880.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2429777 pheS 8090646 pheS Dickeya dadantii Ech703 phenylalanyl-tRNA synthetase subunit alpha YP_002987660.1 2428794 R 579405 CDS YP_002987661.1 242239480 8090647 complement(2430137..2430493) 1 NC_012880.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: eum:ECUMN_2006 50S ribosomal subunit protein L20; 50S ribosomal protein L20 2430493 8090647 Dd703_2050 Dickeya dadantii Ech703 50S ribosomal protein L20 YP_002987661.1 2430137 R 579405 CDS YP_002987662.1 242239481 8090648 complement(2430534..2430731) 1 NC_012880.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: eca:ECA2420 50S ribosomal protein L35; 50S ribosomal protein L35 2430731 rpmI 8090648 rpmI Dickeya dadantii Ech703 50S ribosomal protein L35 YP_002987662.1 2430534 R 579405 CDS YP_002987663.1 242239482 8090649 complement(2430825..2431367) 1 NC_012880.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2431367 infC 8090649 infC Dickeya dadantii Ech703 translation initiation factor IF-3 YP_002987663.1 2430825 R 579405 CDS YP_002987664.1 242239483 8090650 complement(2431371..2433299) 1 NC_012880.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2433299 8090650 Dd703_2053 Dickeya dadantii Ech703 threonyl-tRNA synthetase YP_002987664.1 2431371 R 579405 CDS YP_002987665.1 242239484 8090651 complement(2433602..2433874) 1 NC_012880.1 KEGG: eca:ECA2424 hypothetical protein; hypothetical protein 2433874 8090651 Dd703_2054 Dickeya dadantii Ech703 hypothetical protein YP_002987665.1 2433602 R 579405 CDS YP_002987666.1 242239485 8090652 complement(2434034..2434825) 1 NC_012880.1 PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: eca:ECA2425 pectin degradation repressor; IclR family transcriptional regulator 2434825 8090652 Dd703_2055 Dickeya dadantii Ech703 IclR family transcriptional regulator YP_002987666.1 2434034 R 579405 CDS YP_002987667.1 242239486 8090653 complement(2435035..2436201) 1 NC_012880.1 KEGG: eca:ECA2426 oligogalacturonate lyase; oligogalacturonide lyase 2436201 8090653 Dd703_2056 Dickeya dadantii Ech703 oligogalacturonide lyase YP_002987667.1 2435035 R 579405 CDS YP_002987668.1 242239487 8090655 complement(2437487..2438371) 1 NC_012880.1 PFAM: HtpX domain protein; peptidase M48 Ste24p; KEGG: kpn:KPN_02345 heat shock protein HtpX; HtpX domain-containing protein 2438371 8090655 Dd703_2058 Dickeya dadantii Ech703 HtpX domain-containing protein YP_002987668.1 2437487 R 579405 CDS YP_002987669.1 242239488 8090656 complement(2438701..2440857) 1 NC_012880.1 KEGG: eca:ECA2433 signaling protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2440857 8090656 Dd703_2059 Dickeya dadantii Ech703 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_002987669.1 2438701 R 579405 CDS YP_002987670.1 242239489 8090657 complement(2441602..2442855) 1 NC_012880.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2442855 8090657 Dd703_2060 Dickeya dadantii Ech703 isocitrate dehydrogenase YP_002987670.1 2441602 R 579405 CDS YP_002987671.1 242239490 8090658 2442988..2443614 1 NC_012880.1 PFAM: pseudouridine synthase; KEGG: eca:ECA2440 RNA pseudouridylate synthase; pseudouridine synthase 2443614 8090658 Dd703_2061 Dickeya dadantii Ech703 pseudouridine synthase YP_002987671.1 2442988 D 579405 CDS YP_002987672.1 242239491 8090659 2443607..2444059 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA2441 MutT family protein; NUDIX hydrolase 2444059 8090659 Dd703_2062 Dickeya dadantii Ech703 NUDIX hydrolase YP_002987672.1 2443607 D 579405 CDS YP_002987673.1 242239492 8090660 2444182..2445294 1 NC_012880.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2445294 mnmA 8090660 mnmA Dickeya dadantii Ech703 tRNA-specific 2-thiouridylase MnmA YP_002987673.1 2444182 D 579405 CDS YP_002987674.1 242239493 8090661 2445606..2446235 1 NC_012880.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2446235 8090661 Dd703_2064 Dickeya dadantii Ech703 hypothetical protein YP_002987674.1 2445606 D 579405 CDS YP_002987675.1 242239494 8090662 2446347..2447714 1 NC_012880.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2447714 8090662 Dd703_2065 Dickeya dadantii Ech703 adenylosuccinate lyase YP_002987675.1 2446347 D 579405 CDS YP_002987676.1 242239495 8088233 2447892..2448563 1 NC_012880.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 2448563 8088233 Dd703_2066 Dickeya dadantii Ech703 DNA-binding transcriptional regulator PhoP YP_002987676.1 2447892 D 579405 CDS YP_002987677.1 242239496 8088234 2448583..2450034 1 NC_012880.1 PFAM: PhoQ Sensor domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: eca:ECA2446 sensor protein PhoQ; sensor protein PhoQ 2450034 8088234 Dd703_2067 Dickeya dadantii Ech703 sensor protein PhoQ YP_002987677.1 2448583 D 579405 CDS YP_002987678.1 242239497 8088235 2450262..2451383 1 NC_012880.1 PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein; KEGG: eca:ECA2447 hypothetical protein; cupin 2451383 8088235 Dd703_2068 Dickeya dadantii Ech703 cupin YP_002987678.1 2450262 D 579405 CDS YP_002987679.1 242239498 8088236 complement(2451618..2452889) 1 NC_012880.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2452889 8088236 Dd703_2069 Dickeya dadantii Ech703 peptidase T YP_002987679.1 2451618 R 579405 CDS YP_002987680.1 242239499 8088237 complement(2453479..2453700) 1 NC_012880.1 PFAM: protein of unknown function DUF1920; KEGG: rru:Rru_A2471 hypothetical protein; hypothetical protein 2453700 8088237 Dd703_2070 Dickeya dadantii Ech703 hypothetical protein YP_002987680.1 2453479 R 579405 CDS YP_002987681.1 242239500 8088238 complement(2453722..2456046) 1 NC_012880.1 TIGRFAM: ferrous iron transporter B; small GTP-binding protein; PFAM: Ferrous iron transporter B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: rru:Rru_A2470 ferrous iron transporter B; ferrous iron transporter B 2456046 8088238 Dd703_2071 Dickeya dadantii Ech703 ferrous iron transporter B YP_002987681.1 2453722 R 579405 CDS YP_002987682.1 242239501 8088239 complement(2456071..2456298) 1 NC_012880.1 PFAM: FeoA family protein; KEGG: rru:Rru_A2469 hypothetical protein; FeoA family protein 2456298 8088239 Dd703_2072 Dickeya dadantii Ech703 FeoA family protein YP_002987682.1 2456071 R 579405 CDS YP_002987683.1 242239502 8088240 complement(2456310..2456558) 1 NC_012880.1 PFAM: FeoA family protein; KEGG: rsk:RSKD131_0125 FeoA family protein; FeoA family protein 2456558 8088240 Dd703_2073 Dickeya dadantii Ech703 FeoA family protein YP_002987683.1 2456310 R 579405 CDS YP_002987684.1 242239503 8088241 complement(2456853..2458874) 1 NC_012880.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2458874 8088241 Dd703_2074 Dickeya dadantii Ech703 carboxy-terminal protease YP_002987684.1 2456853 R 579405 CDS YP_002987685.1 242239504 8088243 complement(2459711..2460220) 1 NC_012880.1 PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: eca:ECA2461 hypothetical protein; GAF sensor protein 2460220 8088243 Dd703_2076 Dickeya dadantii Ech703 GAF sensor protein YP_002987685.1 2459711 R 579405 CDS YP_002987686.1 242239505 8088244 2460472..2461755 1 NC_012880.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: paraquat-inducible protein A; KEGG: eca:ECA2462 hypothetical protein; PqiA family integral membrane protein 2461755 8088244 Dd703_2077 Dickeya dadantii Ech703 PqiA family integral membrane protein YP_002987686.1 2460472 D 579405 CDS YP_002987687.1 242239506 8088245 2461724..2464354 1 NC_012880.1 PFAM: hypothetical protein; KEGG: eca:ECA2463 hypothetical protein; hypothetical protein 2464354 8088245 Dd703_2078 Dickeya dadantii Ech703 hypothetical protein YP_002987687.1 2461724 D 579405 CDS YP_002987688.1 242239507 8088246 2464466..2465911 1 NC_012880.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2465911 yebU 8088246 yebU Dickeya dadantii Ech703 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_002987688.1 2464466 D 579405 CDS YP_002987689.1 242239508 8088247 2466143..2466343 1 NC_012880.1 PFAM: protein of unknown function DUF1482; KEGG: set:SEN1185 secreted protein; hypothetical protein 2466343 8088247 Dd703_2080 Dickeya dadantii Ech703 hypothetical protein YP_002987689.1 2466143 D 579405 CDS YP_002987690.1 242239509 8088248 complement(2466577..2468583) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: yen:YE4139 methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis sensory transducer 2468583 8088248 Dd703_2081 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987690.1 2466577 R 579405 CDS YP_002987691.1 242239510 8088249 complement(2469300..2470163) 1 NC_012880.1 PFAM: CI repressor; SMART: helix-turn-helix domain protein; KEGG: spe:Spro_0877 CI repressor; CI repressor 2470163 8088249 Dd703_2082 Dickeya dadantii Ech703 CI repressor YP_002987691.1 2469300 R 579405 CDS YP_002987692.1 242239511 8088250 2470626..2471135 1 NC_012880.1 KEGG: ecz:ECS88_2224 replication gene B protein (GpB); replication protein B 2471135 8088250 Dd703_2083 Dickeya dadantii Ech703 replication protein B YP_002987692.1 2470626 D 579405 CDS YP_002987693.1 242239512 8088251 2471206..2471412 1 NC_012880.1 KEGG: eca:ECA2631 hypothetical protein; hypothetical protein 2471412 8088251 Dd703_2084 Dickeya dadantii Ech703 hypothetical protein YP_002987693.1 2471206 D 579405 CDS YP_002987694.1 242239513 8088252 2471412..2471618 1 NC_012880.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: spe:Spro_0875 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 2471618 8088252 Dd703_2085 Dickeya dadantii Ech703 TraR/DksA family transcriptional regulator YP_002987694.1 2471412 D 579405 CDS YP_002987695.1 242239514 8088253 2471746..2473938 1 NC_012880.1 PFAM: replication gene A; KEGG: ecw:EcE24377A_0988 replication gene A protein; replication protein A 2473938 8088253 Dd703_2086 Dickeya dadantii Ech703 replication protein A YP_002987695.1 2471746 D 579405 CDS YP_002987696.1 242239515 8088254 2474037..2474258 1 NC_012880.1 hypothetical protein 2474258 8088254 Dd703_2087 Dickeya dadantii Ech703 hypothetical protein YP_002987696.1 2474037 D 579405 CDS YP_002987697.1 242239516 8088255 2474799..2475002 1 NC_012880.1 PFAM: tail X family protein; KEGG: ecf:ECH74115_3047 phage tail protein GpX; tail X family protein 2475002 8088255 Dd703_2088 Dickeya dadantii Ech703 tail X family protein YP_002987697.1 2474799 D 579405 CDS YP_002987698.1 242239517 8088256 2475048..2475515 1 NC_012880.1 PFAM: P2 phage tail completion R family protein; KEGG: ecz:ECS88_2203 tail completion protein R (GpR); P2 phage tail completion R family protein 2475515 8088256 Dd703_2089 Dickeya dadantii Ech703 P2 phage tail completion R family protein YP_002987698.1 2475048 D 579405 CDS YP_002987699.1 242239518 8088257 2475687..2476328 1 NC_012880.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: ecm:EcSMS35_4337 phage baseplate assembly protein GpV; phage baseplate assembly protein V 2476328 8088257 Dd703_2090 Dickeya dadantii Ech703 phage baseplate assembly protein V YP_002987699.1 2475687 D 579405 CDS YP_002987700.1 242239519 8088258 2476325..2476672 1 NC_012880.1 PFAM: GPW/gp25 family protein; KEGG: kpn:KPN_04869 prophage baseplate protein; GPW/gp25 family protein 2476672 8088258 Dd703_2091 Dickeya dadantii Ech703 GPW/gp25 family protein YP_002987700.1 2476325 D 579405 CDS YP_002987701.1 242239520 8088259 2476677..2477585 1 NC_012880.1 PFAM: Baseplate J family protein; KEGG: ecf:ECH74115_3037 baseplate assembly protein GpJ; baseplate J family protein 2477585 8088259 Dd703_2092 Dickeya dadantii Ech703 baseplate J family protein YP_002987701.1 2476677 D 579405 CDS YP_002987702.1 242239521 8088260 2477578..2478189 1 NC_012880.1 TIGRFAM: phage tail protein I; KEGG: eca:ECA2609 phage tail protein I; phage tail protein I 2478189 8088260 Dd703_2093 Dickeya dadantii Ech703 phage tail protein I YP_002987702.1 2477578 D 579405 CDS YP_002987703.1 242239522 8088261 2478557..2479912 1 NC_012880.1 KEGG: spe:Spro_1010 hypothetical protein; hypothetical protein 2479912 8088261 Dd703_2094 Dickeya dadantii Ech703 hypothetical protein YP_002987703.1 2478557 D 579405 CDS YP_002987704.1 242239523 8088262 2480119..2481462 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: spe:Spro_2512 major facilitator transporter; major facilitator superfamily protein 2481462 8088262 Dd703_2095 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987704.1 2480119 D 579405 CDS YP_002987705.1 242239524 8088263 complement(2481574..2482140) 1 NC_012880.1 PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: ecg:E2348C_1532 hypothetical protein; Smr protein/MutS2 2482140 8088263 Dd703_2096 Dickeya dadantii Ech703 Smr protein/MutS2 YP_002987705.1 2481574 R 579405 CDS YP_002987706.1 242239525 8088264 2482562..2483113 1 NC_012880.1 PFAM: Tail Collar domain protein; KEGG: plu:plu0021 hypothetical protein; Tail Collar domain-containing protein 2483113 8088264 Dd703_2097 Dickeya dadantii Ech703 Tail Collar domain-containing protein YP_002987706.1 2482562 D 579405 CDS YP_002987707.1 242239526 8088265 2483113..2483727 1 NC_012880.1 PFAM: tail assembly chaperone gp38; KEGG: eca:ECA2607 bacteriophage tail fiber assembly protein G; tail assembly chaperone gp38 2483727 8088265 Dd703_2098 Dickeya dadantii Ech703 tail assembly chaperone gp38 YP_002987707.1 2483113 D 579405 CDS YP_002987708.1 242239527 8088266 2483937..2485106 1 NC_012880.1 PFAM: tail sheath protein; KEGG: kpn:KPN_04864 prophage tail sheath; tail sheath protein 2485106 8088266 Dd703_2099 Dickeya dadantii Ech703 tail sheath protein YP_002987708.1 2483937 D 579405 CDS YP_002987709.1 242239528 8088267 2485121..2485639 1 NC_012880.1 TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: see:SNSL254_A4384 phage major tail tube protein; phage major tail tube protein 2485639 8088267 Dd703_2100 Dickeya dadantii Ech703 phage major tail tube protein YP_002987709.1 2485121 D 579405 CDS YP_002987710.1 242239529 8088268 2485703..2485993 1 NC_012880.1 PFAM: tail E family protein; KEGG: ecq:ECED1_2437 tail protein E (GpE); tail E family protein 2485993 8088268 Dd703_2101 Dickeya dadantii Ech703 tail E family protein YP_002987710.1 2485703 D 579405 CDS YP_002987711.1 242239530 8088269 2485996..2486145 1 NC_012880.1 PFAM: P2 GpE family protein; KEGG: kpn:KPN_04861 prophage tail protein; P2 GpE family protein 2486145 8088269 Dd703_2102 Dickeya dadantii Ech703 P2 GpE family protein YP_002987711.1 2485996 D 579405 CDS YP_002987712.1 242239531 8088270 2486138..2488351 1 NC_012880.1 KEGG: kpn:KPN_04860 prophage tail length determinator; hypothetical protein 2488351 8088270 Dd703_2103 Dickeya dadantii Ech703 hypothetical protein YP_002987712.1 2486138 D 579405 CDS YP_002987713.1 242239532 8088271 2488365..2488859 1 NC_012880.1 PFAM: P2 GpU family protein; KEGG: see:SNSL254_A4388 GP25; P2 GpU family protein 2488859 8088271 Dd703_2104 Dickeya dadantii Ech703 P2 GpU family protein YP_002987713.1 2488365 D 579405 CDS YP_002987714.1 242239533 8088272 2488856..2490061 1 NC_012880.1 PFAM: late control D family protein; KEGG: see:SNSL254_A4389 late control gene D protein; late control D family protein 2490061 8088272 Dd703_2105 Dickeya dadantii Ech703 late control D family protein YP_002987714.1 2488856 D 579405 CDS YP_002987715.1 242239534 8088273 2490158..2490352 1 NC_012880.1 PFAM: transcriptional activator Ogr/delta; KEGG: ecg:E2348C_2893 predicted DNA-binding transcriptional regulator; transcriptional activator Ogr/delta 2490352 8088273 Dd703_2106 Dickeya dadantii Ech703 transcriptional activator Ogr/delta YP_002987715.1 2490158 D 579405 CDS YP_002987716.1 242239535 8088274 2490854..2492707 1 NC_012880.1 KEGG: spe:Spro_2420 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; hypothetical protein; SMART: GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 2492707 8088274 Dd703_2107 Dickeya dadantii Ech703 PAS/PAC and GAF sensor-containing diguanylate cyclase YP_002987716.1 2490854 D 579405 CDS YP_002987717.1 242239536 8088275 2492990..2494660 1 NC_012880.1 PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; KEGG: efe:EFER_3055 methyl-accepting chemotaxis protein I, serine sensor receptor; methyl-accepting chemotaxis sensory transducer 2494660 8088275 Dd703_2108 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987717.1 2492990 D 579405 CDS YP_002987718.1 242239537 8088276 2495000..2495701 1 NC_012880.1 PFAM: ThiJ/PfpI domain protein; KEGG: pfo:Pfl01_1835 ThiJ/PfpI; ThiJ/PfpI domain-containing protein 2495701 8088276 Dd703_2109 Dickeya dadantii Ech703 ThiJ/PfpI domain-containing protein YP_002987718.1 2495000 D 579405 CDS YP_002987719.1 242239538 8088277 2496046..2496360 1 NC_012880.1 PFAM: holin family 2; KEGG: eca:ECA2617 phage lysis protein Y, holin; holin family 2 2496360 8088277 Dd703_2110 Dickeya dadantii Ech703 holin family 2 YP_002987719.1 2496046 D 579405 CDS YP_002987720.1 242239539 8088278 2496350..2496841 1 NC_012880.1 PFAM: glycoside hydrolase family 24; KEGG: ecm:EcSMS35_4330 phage lysozyme; lysozyme 2496841 8088278 Dd703_2111 Dickeya dadantii Ech703 lysozyme YP_002987720.1 2496350 D 579405 CDS YP_002987721.1 242239540 8088279 2496838..2497287 1 NC_012880.1 KEGG: eca:ECA2615 phage encoded host lysis, regulatory protein; phage encoded host lysis, regulatory protein 2497287 8088279 Dd703_2112 Dickeya dadantii Ech703 phage encoded host lysis, regulatory protein YP_002987721.1 2496838 D 579405 CDS YP_002987722.1 242239541 8088280 2497235..2497399 1 NC_012880.1 KEGG: eca:ECA2614A phage protein (thought to be involved in host lysis); phage protein (thought to be involved in host lysis) 2497399 8088280 Dd703_2113 Dickeya dadantii Ech703 phage protein (thought to be involved in host lysis) YP_002987722.1 2497235 D 579405 CDS YP_002987723.1 242239542 8088281 complement(2497630..2498103) 1 NC_012880.1 PFAM: OsmC family protein; KEGG: bcj:BCAM2803 stress-induced protein; OsmC family protein 2498103 8088281 Dd703_2114 Dickeya dadantii Ech703 OsmC family protein YP_002987723.1 2497630 R 579405 CDS YP_002987724.1 242239543 8088282 2498328..2500214 1 NC_012880.1 PFAM: hypothetical protein; KEGG: eca:ECA2048 hypothetical protein; hypothetical protein 2500214 8088282 Dd703_2115 Dickeya dadantii Ech703 hypothetical protein YP_002987724.1 2498328 D 579405 CDS YP_002987725.1 242239544 8088283 2500230..2501447 1 NC_012880.1 PFAM: protein of unknown function DUF1501; KEGG: avi:Avi_3565 hypothetical protein; hypothetical protein 2501447 8088283 Dd703_2116 Dickeya dadantii Ech703 hypothetical protein YP_002987725.1 2500230 D 579405 CDS YP_002987726.1 242239545 8088284 2501475..2503361 1 NC_012880.1 PFAM: chitin synthase; KEGG: eca:ECA2046 bifunctional enzyme including aminotransferase and chitin synthase; chitin synthase 2503361 8088284 Dd703_2117 Dickeya dadantii Ech703 chitin synthase YP_002987726.1 2501475 D 579405 CDS YP_002987727.1 242239546 8088285 complement(2503502..2503960) 1 NC_012880.1 hypothetical protein 2503960 8088285 Dd703_2118 Dickeya dadantii Ech703 hypothetical protein YP_002987727.1 2503502 R 579405 CDS YP_002987728.1 242239547 8088286 complement(2504651..2504953) 1 NC_012880.1 KEGG: kpn:KPN_00487 hypothetical protein; hypothetical protein 2504953 8088286 Dd703_2119 Dickeya dadantii Ech703 hypothetical protein YP_002987728.1 2504651 R 579405 CDS YP_002987729.1 242239548 8088287 complement(2505365..2505592) 1 NC_012880.1 PFAM: protein of unknown function DUF465; KEGG: cko:CKO_01463 hypothetical protein; hypothetical protein 2505592 8088287 Dd703_2120 Dickeya dadantii Ech703 hypothetical protein YP_002987729.1 2505365 R 579405 CDS YP_002987730.1 242239549 8088288 2506022..2506945 1 NC_012880.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: set:SEN2387 acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 2506945 8088288 Dd703_2121 Dickeya dadantii Ech703 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_002987730.1 2506022 D 579405 CDS YP_002987731.1 242239550 8088289 complement(2507523..2507735) 1 NC_012880.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eca:ECA2471 cold shock protein; cold-shock DNA-binding domain-containing protein 2507735 8088289 Dd703_2122 Dickeya dadantii Ech703 cold-shock DNA-binding domain-containing protein YP_002987731.1 2507523 R 579405 CDS YP_002987732.1 242239551 8088290 complement(2508562..2508930) 1 NC_012880.1 KEGG: eca:ECA2472 hypothetical protein; hypothetical protein 2508930 8088290 Dd703_2123 Dickeya dadantii Ech703 hypothetical protein YP_002987732.1 2508562 R 579405 CDS YP_002987733.1 242239552 8088291 complement(2509110..2509610) 1 NC_012880.1 PFAM: ferritin; KEGG: eca:ECA2473 ferritin; ferroxidase 2509610 8088291 Dd703_2124 Dickeya dadantii Ech703 ferroxidase YP_002987733.1 2509110 R 579405 CDS YP_002987734.1 242239553 8088292 complement(2510030..2510908) 1 NC_012880.1 PFAM: copper resistance D domain protein; KEGG: ses:SARI_01072 hypothetical protein; copper resistance D domain-containing protein 2510908 8088292 Dd703_2125 Dickeya dadantii Ech703 copper resistance D domain-containing protein YP_002987734.1 2510030 R 579405 CDS YP_002987735.1 242239554 8088293 2511145..2511375 1 NC_012880.1 PFAM: DNA polymerase II subunit beta; KEGG: spe:Spro_1941 DNA polymerase III subunit theta; DNA polymerase II subunit beta 2511375 8088293 Dd703_2126 Dickeya dadantii Ech703 DNA polymerase II subunit beta YP_002987735.1 2511145 D 579405 CDS YP_002987736.1 242239555 8088294 complement(2511381..2511518) 1 NC_012880.1 hypothetical protein 2511518 8088294 Dd703_2127 Dickeya dadantii Ech703 hypothetical protein YP_002987736.1 2511381 R 579405 CDS YP_002987737.1 242239556 8088295 2511772..2511888 1 NC_012880.1 KEGG: ypi:YpsIP31758_2345 hypothetical protein; hypothetical protein 2511888 8088295 Dd703_2128 Dickeya dadantii Ech703 hypothetical protein YP_002987737.1 2511772 D 579405 CDS YP_002987738.1 242239557 8088296 complement(2512138..2514198) 1 NC_012880.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: eca:ECA2476 protease II; oligopeptidase B 2514198 8088296 Dd703_2129 Dickeya dadantii Ech703 oligopeptidase B YP_002987738.1 2512138 R 579405 CDS YP_002987739.1 242239558 8088297 2514536..2515714 1 NC_012880.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 2515714 purT 8088297 purT Dickeya dadantii Ech703 phosphoribosylglycinamide formyltransferase 2 YP_002987739.1 2514536 D 579405 CDS YP_002987740.1 242239559 8088298 complement(2515808..2516284) 1 NC_012880.1 PFAM: protein of unknown function DUF606; KEGG: slo:Shew_2290 hypothetical protein; hypothetical protein 2516284 8088298 Dd703_2131 Dickeya dadantii Ech703 hypothetical protein YP_002987740.1 2515808 R 579405 CDS YP_002987741.1 242239560 8088299 complement(2516286..2516747) 1 NC_012880.1 PFAM: protein of unknown function DUF606; KEGG: slo:Shew_2291 hypothetical protein; hypothetical protein 2516747 8088299 Dd703_2132 Dickeya dadantii Ech703 hypothetical protein YP_002987741.1 2516286 R 579405 CDS YP_002987742.1 242239561 8088300 2516852..2517859 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cvi:CV_3482 LysR family transcriptional regulator; LysR family transcriptional regulator 2517859 8088300 Dd703_2133 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987742.1 2516852 D 579405 CDS YP_002987743.1 242239562 8088301 complement(2517914..2519155) 1 NC_012880.1 PFAM: glycoside hydrolase family 30; KEGG: xcv:XCV0965 xylanase precursor; glucuronoarabinoxylan endo-1,4-beta-xylanase 2519155 8088301 Dd703_2134 Dickeya dadantii Ech703 glucuronoarabinoxylan endo-1,4-beta-xylanase YP_002987743.1 2517914 R 579405 CDS YP_002987744.1 242239563 8088302 complement(2519631..2520272) 1 NC_012880.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2520272 8088302 Dd703_2135 Dickeya dadantii Ech703 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_002987744.1 2519631 R 579405 CDS YP_002987745.1 242239564 8088303 complement(2520440..2521915) 1 NC_012880.1 KEGG: eca:ECA2479 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2521915 8088303 Dd703_2136 Dickeya dadantii Ech703 glucose-6-phosphate 1-dehydrogenase YP_002987745.1 2520440 R 579405 CDS YP_002987746.1 242239565 8088304 2522280..2523149 1 NC_012880.1 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2523149 8088304 Dd703_2137 Dickeya dadantii Ech703 DNA-binding transcriptional regulator HexR YP_002987746.1 2522280 D 579405 CDS YP_002987747.1 242239566 8088305 2523323..2524765 1 NC_012880.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2524765 8088305 Dd703_2138 Dickeya dadantii Ech703 pyruvate kinase YP_002987747.1 2523323 D 579405 CDS YP_002987748.1 242239567 8088306 complement(2525189..2525632) 1 NC_012880.1 KEGG: hch:HCH_05781 hypothetical protein; hypothetical protein 2525632 8088306 Dd703_2139 Dickeya dadantii Ech703 hypothetical protein YP_002987748.1 2525189 R 579405 CDS YP_002987749.1 242239568 8088307 complement(2526217..2527197) 1 NC_012880.1 transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2527197 8088307 Dd703_2140 Dickeya dadantii Ech703 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_002987749.1 2526217 R 579405 CDS YP_002987750.1 242239569 8088308 complement(2527347..2528807) 1 NC_012880.1 PFAM: peptidase M23; peptidoglycan-binding LysM; Opacity-associated protein A; Opacity-associated protein A domain protein; SMART: peptidoglycan-binding LysM; KEGG: eca:ECA2483 hypothetical protein; hypothetical protein 2528807 8088308 Dd703_2141 Dickeya dadantii Ech703 hypothetical protein YP_002987750.1 2527347 R 579405 CDS YP_002987751.1 242239570 8088309 complement(2528820..2529842) 1 NC_012880.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein 2529842 znuA 8088309 znuA Dickeya dadantii Ech703 high-affinity zinc transporter periplasmic protein YP_002987751.1 2528820 R 579405 CDS YP_002987752.1 242239571 8088310 2529918..2530676 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2485 high-affinity zinc transporter ATPase; ABC transporter 2530676 8088310 Dd703_2143 Dickeya dadantii Ech703 ABC transporter YP_002987752.1 2529918 D 579405 CDS YP_002987753.1 242239572 8088311 2530673..2531458 1 NC_012880.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein 2531458 znuB 8088311 znuB Dickeya dadantii Ech703 high-affinity zinc transporter membrane protein YP_002987753.1 2530673 D 579405 CDS YP_002987754.1 242239573 8088312 complement(2531610..2532614) 1 NC_012880.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2532614 ruvB 8088312 ruvB Dickeya dadantii Ech703 Holliday junction DNA helicase RuvB YP_002987754.1 2531610 R 579405 CDS YP_002987755.1 242239574 8088313 complement(2532622..2533236) 1 NC_012880.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2533236 ruvA 8088313 ruvA Dickeya dadantii Ech703 Holliday junction DNA helicase RuvA YP_002987755.1 2532622 R 579405 CDS YP_002987756.1 242239575 8086533 complement(2533512..2534543) 1 NC_012880.1 TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter; KEGG: esa:ESA_02056 hypothetical protein; high-affinity nickel-transporter 2534543 8086533 Dd703_2147 Dickeya dadantii Ech703 high-affinity nickel-transporter YP_002987756.1 2533512 R 579405 CDS YP_002987757.1 242239576 8086534 complement(2534881..2536890) 1 NC_012880.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: esa:ESA_00406 transketolase; transketolase 2536890 8086534 Dd703_2148 Dickeya dadantii Ech703 transketolase YP_002987757.1 2534881 R 579405 CDS YP_002987758.1 242239577 8086535 complement(2536909..2537859) 1 NC_012880.1 KEGG: kpe:KPK_3427 transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase; transaldolase A 2537859 8086535 Dd703_2149 Dickeya dadantii Ech703 transaldolase A YP_002987758.1 2536909 R 579405 CDS YP_002987759.1 242239578 8086536 complement(2537892..2538350) 1 NC_012880.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 2538350 8086536 Dd703_2150 Dickeya dadantii Ech703 ribose-5-phosphate isomerase B YP_002987759.1 2537892 R 579405 CDS YP_002987760.1 242239579 8086537 complement(2538400..2538771) 1 NC_012880.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: kpn:KPN_01124 PTS family enzyme IIA, glucitol/sorbitol-specific; PTS system glucitol/sorbitol-specific transporter subunit IIA 2538771 8086537 Dd703_2151 Dickeya dadantii Ech703 PTS system glucitol/sorbitol-specific transporter subunit IIA YP_002987760.1 2538400 R 579405 CDS YP_002987761.1 242239580 8086538 complement(2538782..2539789) 1 NC_012880.1 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 2539789 8086538 Dd703_2152 Dickeya dadantii Ech703 2-keto-3-deoxygluconate permease YP_002987761.1 2538782 R 579405 CDS YP_002987762.1 242239581 8086539 complement(2539953..2541671) 1 NC_012880.1 PFAM: Sorbitol phosphotransferase protein II domain protein; type III effector Hrp-dependent outers; KEGG: kpn:KPN_01122 glucitol/sorbitol-specific PTS family protein IIBC; protein-N(pi)-phosphohistidine--sugar phosphotransferase 2541671 8086539 Dd703_2153 Dickeya dadantii Ech703 protein-N(pi)-phosphohistidine--sugar phosphotransferase YP_002987762.1 2539953 R 579405 CDS YP_002987763.1 242239582 8086540 complement(2541727..2542752) 1 NC_012880.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 2542752 pdxA 8086540 pdxA Dickeya dadantii Ech703 4-hydroxythreonine-4-phosphate dehydrogenase YP_002987763.1 2541727 R 579405 CDS YP_002987764.1 242239583 8086541 2542998..2543783 1 NC_012880.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: kpe:KPK_3433 triosephosphate isomerase; triosephosphate isomerase 2543783 8086541 Dd703_2155 Dickeya dadantii Ech703 triosephosphate isomerase YP_002987764.1 2542998 D 579405 CDS YP_002987765.1 242239584 8086542 2543971..2544933 1 NC_012880.1 PFAM: sugar-binding domain protein; KEGG: kpe:KPK_3434 sugar-binding domain protein; DeoR family transcriptional regulator 2544933 8086542 Dd703_2156 Dickeya dadantii Ech703 DeoR family transcriptional regulator YP_002987765.1 2543971 D 579405 CDS YP_002987766.1 242239585 8086543 complement(2545065..2545586) 1 NC_012880.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2545586 ruvC 8086543 ruvC Dickeya dadantii Ech703 Holliday junction resolvase YP_002987766.1 2545065 R 579405 CDS YP_002987767.1 242239586 8086544 complement(2545627..2546370) 1 NC_012880.1 PFAM: protein of unknown function DUF28; KEGG: eca:ECA2494 hypothetical protein; hypothetical protein 2546370 8086544 Dd703_2158 Dickeya dadantii Ech703 hypothetical protein YP_002987767.1 2545627 R 579405 CDS YP_002987768.1 242239587 8086545 complement(2546513..2546977) 1 NC_012880.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2546977 ntpA 8086545 ntpA Dickeya dadantii Ech703 dATP pyrophosphohydrolase YP_002987768.1 2546513 R 579405 CDS YP_002987769.1 242239588 8086546 complement(2546958..2548763) 1 NC_012880.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2548763 aspS 8086546 aspS Dickeya dadantii Ech703 aspartyl-tRNA synthetase YP_002987769.1 2546958 R 579405 CDS YP_002987770.1 242239589 8086547 2549059..2549871 1 NC_012880.1 PFAM: protein of unknown function DUF72; KEGG: spe:Spro_2784 hypothetical protein; hypothetical protein 2549871 8086547 Dd703_2161 Dickeya dadantii Ech703 hypothetical protein YP_002987770.1 2549059 D 579405 CDS YP_002987771.1 242239590 8086548 complement(2550111..2551355) 1 NC_012880.1 PFAM: protein of unknown function DUF201; phosphoribosylglycinamide synthetase; KEGG: ypi:YpsIP31758_4090 hypothetical protein; hypothetical protein 2551355 8086548 Dd703_2162 Dickeya dadantii Ech703 hypothetical protein YP_002987771.1 2550111 R 579405 CDS YP_002987772.1 242239591 8086549 complement(2551352..2552290) 1 NC_012880.1 KEGG: ypy:YPK_0073 hypothetical protein; hypothetical protein 2552290 8086549 Dd703_2163 Dickeya dadantii Ech703 hypothetical protein YP_002987772.1 2551352 R 579405 CDS YP_002987773.1 242239592 8086550 complement(2552294..2552953) 1 NC_012880.1 PFAM: alanine racemase domain protein; KEGG: pub:SAR11_0361 hypothetical protein; alanine racemase domain-containing protein 2552953 8086550 Dd703_2164 Dickeya dadantii Ech703 alanine racemase domain-containing protein YP_002987773.1 2552294 R 579405 CDS YP_002987774.1 242239593 8086551 complement(2552950..2553513) 1 NC_012880.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2553513 8086551 Dd703_2165 Dickeya dadantii Ech703 adenine phosphoribosyltransferase YP_002987774.1 2552950 R 579405 CDS YP_002987775.1 242239594 8086552 complement(2553524..2554462) 1 NC_012880.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ypg:YpAngola_A4139 pyridoxal-phosphate dependent protein; pyridoxal-5'-phosphate-dependent protein subunit beta 2554462 8086552 Dd703_2166 Dickeya dadantii Ech703 pyridoxal-5'-phosphate-dependent protein subunit beta YP_002987775.1 2553524 R 579405 CDS YP_002987776.1 242239595 8086553 2555351..2555746 1 NC_012880.1 KEGG: eca:ECA2510 hypothetical protein; hypothetical protein 2555746 8086553 Dd703_2167 Dickeya dadantii Ech703 hypothetical protein YP_002987776.1 2555351 D 579405 CDS YP_002987777.1 242239596 8086554 2555882..2556625 1 NC_012880.1 TIGRFAM: methyltransferase; PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: spe:Spro_2786 methyltransferase; methyltransferase 2556625 8086554 Dd703_2168 Dickeya dadantii Ech703 methyltransferase YP_002987777.1 2555882 D 579405 CDS YP_002987778.1 242239597 8086555 2556622..2557593 1 NC_012880.1 TIGRFAM: methyltransferase; PFAM: methyltransferase ; methyltransferase type 11; KEGG: eca:ECA2512 hypothetical protein; methyltransferase 2557593 8086555 Dd703_2169 Dickeya dadantii Ech703 methyltransferase YP_002987778.1 2556622 D 579405 CDS YP_002987779.1 242239598 8086556 complement(2557679..2557939) 1 NC_012880.1 hypothetical protein 2557939 8086556 Dd703_2170 Dickeya dadantii Ech703 hypothetical protein YP_002987779.1 2557679 R 579405 CDS YP_002987780.1 242239599 8086557 complement(2558256..2559020) 1 NC_012880.1 PFAM: CutC family protein; KEGG: eca:ECA2518 copper homeostasis protein CutC; copper homeostasis protein CutC 2559020 8086557 Dd703_2171 Dickeya dadantii Ech703 copper homeostasis protein CutC YP_002987780.1 2558256 R 579405 CDS YP_002987781.1 242239600 8086558 complement(2559370..2559942) 1 NC_012880.1 PFAM: protein of unknown function DUF991; KEGG: eca:ECA2519 hypothetical protein; hypothetical protein 2559942 8086558 Dd703_2172 Dickeya dadantii Ech703 hypothetical protein YP_002987781.1 2559370 R 579405 CDS YP_002987782.1 242239601 8086559 2560109..2561839 1 NC_012880.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2561839 argS 8086559 argS Dickeya dadantii Ech703 arginyl-tRNA synthetase YP_002987782.1 2560109 D 579405 CDS YP_002987783.1 242239602 8086560 complement(2561909..2563135) 1 NC_012880.1 PFAM: EAL domain protein; metal-dependent hydrolase HDOD; KEGG: esa:ESA_01854 hypothetical protein; diguanylate phosphodiesterase 2563135 8086560 Dd703_2174 Dickeya dadantii Ech703 diguanylate phosphodiesterase YP_002987783.1 2561909 R 579405 CDS YP_002987784.1 242239603 8086561 complement(2563545..2565137) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: rme:Rmet_0160 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2565137 8086561 Dd703_2175 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987784.1 2563545 R 579405 CDS YP_002987785.1 242239604 8086562 complement(2565520..2567055) 1 NC_012880.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: eca:ECA2521 virulence factor; integral membrane protein MviN 2567055 8086562 Dd703_2176 Dickeya dadantii Ech703 integral membrane protein MviN YP_002987785.1 2565520 R 579405 CDS YP_002987786.1 242239605 8086563 complement(2567272..2568189) 1 NC_012880.1 PFAM: oxidoreductase domain protein; KEGG: yps:YPTB2025 oxidoreductase; oxidoreductase domain-containing protein 2568189 8086563 Dd703_2177 Dickeya dadantii Ech703 oxidoreductase domain-containing protein YP_002987786.1 2567272 R 579405 CDS YP_002987787.1 242239606 8086564 complement(2568230..2568877) 1 NC_012880.1 PFAM: protein of unknown function DUF480; KEGG: eca:ECA2523 hypothetical protein; hypothetical protein 2568877 8086564 Dd703_2178 Dickeya dadantii Ech703 hypothetical protein YP_002987787.1 2568230 R 579405 CDS YP_002987788.1 242239607 8086565 complement(2568983..2569567) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2524 ribosomal-protein-S5-alanine N-acetyltransferase; ribosomal-protein-S5-alanine N-acetyltransferase 2569567 8086565 Dd703_2179 Dickeya dadantii Ech703 ribosomal-protein-S5-alanine N-acetyltransferase YP_002987788.1 2568983 R 579405 CDS YP_002987789.1 242239608 8086566 complement(2569712..2569936) 1 NC_012880.1 hypothetical protein 2569936 8086566 Dd703_2180 Dickeya dadantii Ech703 hypothetical protein YP_002987789.1 2569712 R 579405 CDS YP_002987790.1 242239609 8086567 2569968..2571173 1 NC_012880.1 Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 2571173 8086567 Dd703_2181 Dickeya dadantii Ech703 multidrug resistance protein MdtH YP_002987790.1 2569968 D 579405 CDS YP_002987791.1 242239610 8086568 2571455..2572102 1 NC_012880.1 TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein; KEGG: eca:ECA2526 glutaredoxin 2; GrxB family glutaredoxin 2572102 8086568 Dd703_2182 Dickeya dadantii Ech703 GrxB family glutaredoxin YP_002987791.1 2571455 D 579405 CDS YP_002987792.1 242239611 8086569 2572226..2572789 1 NC_012880.1 PFAM: protein of unknown function DUF1439; KEGG: eca:ECA2527 hypothetical protein; hypothetical protein 2572789 8086569 Dd703_2183 Dickeya dadantii Ech703 hypothetical protein YP_002987792.1 2572226 D 579405 CDS YP_002987793.1 242239612 8086570 complement(2572854..2573423) 1 NC_012880.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein; cytoplasmic chaperone TorD family protein 2573423 8086570 Dd703_2184 Dickeya dadantii Ech703 cytoplasmic chaperone TorD family protein YP_002987793.1 2572854 R 579405 CDS YP_002987794.1 242239613 8086571 complement(2573455..2574192) 1 NC_012880.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: eca:ECA2529 hydrolase; hydrolase 2574192 8086571 Dd703_2185 Dickeya dadantii Ech703 hydrolase YP_002987794.1 2573455 R 579405 CDS YP_002987795.1 242239614 8086573 complement(2574886..2575551) 1 NC_012880.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO0021 haloacid dehalogenase-like hydrolase family protein; phosphoglycolate phosphatase; haloacid dehalogenase 2575551 8086573 Dd703_2186 Dickeya dadantii Ech703 haloacid dehalogenase YP_002987795.1 2574886 R 579405 CDS YP_002987796.1 242239615 8086574 2575670..2576047 1 NC_012880.1 PFAM: endoribonuclease L-PSP; KEGG: pmr:PMI3427 endoribonuclease; endoribonuclease L-PSP 2576047 8086574 Dd703_2187 Dickeya dadantii Ech703 endoribonuclease L-PSP YP_002987796.1 2575670 D 579405 CDS YP_002987797.1 242239616 8086575 2576153..2577109 1 NC_012880.1 hypothetical protein 2577109 8086575 Dd703_2188 Dickeya dadantii Ech703 hypothetical protein YP_002987797.1 2576153 D 579405 CDS YP_002987798.1 242239617 8086576 complement(2577181..2578158) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dac:Daci_5296 MarR family transcriptional regulator; MarR family transcriptional regulator with acetyltransferase activity 2578158 8086576 Dd703_2189 Dickeya dadantii Ech703 MarR family transcriptional regulator with acetyltransferase activity YP_002987798.1 2577181 R 579405 CDS YP_002987799.1 242239618 8086577 complement(2578263..2579024) 1 NC_012880.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: esa:ESA_02953 hypothetical protein; DeoR family transcriptional regulator 2579024 8086577 Dd703_2190 Dickeya dadantii Ech703 DeoR family transcriptional regulator YP_002987799.1 2578263 R 579405 CDS YP_002987800.1 242239619 8086578 2579243..2579842 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_2260 NUDIX hydrolase; NUDIX hydrolase 2579842 8086578 Dd703_2191 Dickeya dadantii Ech703 NUDIX hydrolase YP_002987800.1 2579243 D 579405 CDS YP_002987801.1 242239620 8086579 2580291..2580932 1 NC_012880.1 PFAM: ribonuclease T2; KEGG: pfo:Pfl01_3807 ribonuclease T2; ribonuclease T2 2580932 8086579 Dd703_2192 Dickeya dadantii Ech703 ribonuclease T2 YP_002987801.1 2580291 D 579405 CDS YP_002987802.1 242239621 8086580 2581237..2581743 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: hypothetical protein; NUDIX hydrolase 2581743 8086580 Dd703_2193 Dickeya dadantii Ech703 NUDIX hydrolase YP_002987802.1 2581237 D 579405 CDS YP_002987803.1 242239622 8086581 complement(2581810..2582922) 1 NC_012880.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bbt:BBta_2707 oxidoreductase; NADH:flavin oxidoreductase 2582922 8086581 Dd703_2194 Dickeya dadantii Ech703 NADH:flavin oxidoreductase YP_002987803.1 2581810 R 579405 CDS YP_002987804.1 242239623 8086582 2583023..2583433 1 NC_012880.1 PFAM: helix-turn-helix HxlR type; KEGG: bbt:BBta_2706 transcriptional regulator; HxlR family transcriptional regulator 2583433 8086582 Dd703_2195 Dickeya dadantii Ech703 HxlR family transcriptional regulator YP_002987804.1 2583023 D 579405 CDS YP_002987805.1 242239624 8086583 complement(2583482..2585152) 1 NC_012880.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase 2585152 8086583 Dd703_2196 Dickeya dadantii Ech703 multicopper oxidase YP_002987805.1 2583482 R 579405 CDS YP_002987806.1 242239625 8086584 complement(2585453..2586880) 1 NC_012880.1 hypothetical protein 2586880 8086584 Dd703_2197 Dickeya dadantii Ech703 hypothetical protein YP_002987806.1 2585453 R 579405 CDS YP_002987807.1 242239626 8086585 complement(2587185..2591618) 1 NC_012880.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 2591618 mukB 8086585 mukB Dickeya dadantii Ech703 cell division protein MukB YP_002987807.1 2587185 R 579405 CDS YP_002987808.1 242239627 8086586 complement(2591615..2592331) 1 NC_012880.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 2592331 8086586 Dd703_2199 Dickeya dadantii Ech703 condesin subunit E YP_002987808.1 2591615 R 579405 CDS YP_002987809.1 242239628 8086587 complement(2592312..2593634) 1 NC_012880.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 2593634 8086587 Dd703_2200 Dickeya dadantii Ech703 condesin subunit F YP_002987809.1 2592312 R 579405 CDS YP_002987810.1 242239629 8086588 complement(2593631..2594416) 1 NC_012880.1 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA 2594416 8086588 Dd703_2201 Dickeya dadantii Ech703 metallothionein SmtA YP_002987810.1 2593631 R 579405 CDS YP_002987811.1 242239630 8086589 2594606..2595385 1 NC_012880.1 PFAM: protein of unknown function DUF218; KEGG: eca:ECA2551 hypothetical protein; hypothetical protein 2595385 8086589 Dd703_2202 Dickeya dadantii Ech703 hypothetical protein YP_002987811.1 2594606 D 579405 CDS YP_002987812.1 242239631 8086590 complement(2595403..2596299) 1 NC_012880.1 PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA2552 hypothetical protein; hypothetical protein 2596299 8086590 Dd703_2203 Dickeya dadantii Ech703 hypothetical protein YP_002987812.1 2595403 R 579405 CDS YP_002987813.1 242239632 8086591 complement(2596794..2598113) 1 NC_012880.1 KEGG: eca:ECA2553 pectate lyase; pectate lyase 2598113 8086591 Dd703_2204 Dickeya dadantii Ech703 pectate lyase YP_002987813.1 2596794 R 579405 CDS YP_002987814.1 242239633 8086592 complement(2598423..2599175) 1 NC_012880.1 KEGG: eca:ECA2554 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 2599175 8086592 Dd703_2205 Dickeya dadantii Ech703 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_002987814.1 2598423 R 579405 CDS YP_002987815.1 242239634 8086593 complement(2599172..2599354) 1 NC_012880.1 PFAM: protein of unknown function DUF343; KEGG: eca:ECA2555 hypothetical protein; hypothetical protein 2599354 8086593 Dd703_2206 Dickeya dadantii Ech703 hypothetical protein YP_002987815.1 2599172 R 579405 CDS YP_002987816.1 242239635 8086594 complement(2599394..2600389) 1 NC_012880.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2600389 lpxK 8086594 lpxK Dickeya dadantii Ech703 tetraacyldisaccharide 4'-kinase YP_002987816.1 2599394 R 579405 CDS YP_002987817.1 242239636 8086595 complement(2600386..2602134) 1 NC_012880.1 involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding/permease 2602134 8086595 Dd703_2208 Dickeya dadantii Ech703 lipid transporter ATP-binding/permease YP_002987817.1 2600386 R 579405 CDS YP_002987818.1 242239637 8086596 complement(2602173..2604416) 1 NC_012880.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase; KEGG: eca:ECA2558 hypothetical protein; hypothetical protein 2604416 8086596 Dd703_2209 Dickeya dadantii Ech703 hypothetical protein YP_002987818.1 2602173 R 579405 CDS YP_002987819.1 242239638 8086597 complement(2604865..2605203) 1 NC_012880.1 PFAM: protein of unknown function DUF496; KEGG: eca:ECA2560 hypothetical protein; hypothetical protein 2605203 8086597 Dd703_2210 Dickeya dadantii Ech703 hypothetical protein YP_002987819.1 2604865 R 579405 CDS YP_002987820.1 242239639 8086598 2605607..2607037 1 NC_012880.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 2607037 sbcB 8086598 sbcB Dickeya dadantii Ech703 exonuclease I YP_002987820.1 2605607 D 579405 CDS YP_002987821.1 242239640 8086599 complement(2607281..2608642) 1 NC_012880.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_13600 amino acid permease; amino acid permease-associated protein 2608642 8086599 Dd703_2212 Dickeya dadantii Ech703 amino acid permease-associated protein YP_002987821.1 2607281 R 579405 CDS YP_002987822.1 242239641 8086600 complement(2608632..2608877) 1 NC_012880.1 hypothetical protein 2608877 8086600 Dd703_2213 Dickeya dadantii Ech703 hypothetical protein YP_002987822.1 2608632 R 579405 CDS YP_002987823.1 242239642 8086601 complement(2609061..2609819) 1 NC_012880.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: eca:ECA2568 hypothetical protein; YcgR family protein 2609819 8086601 Dd703_2214 Dickeya dadantii Ech703 YcgR family protein YP_002987823.1 2609061 R 579405 CDS YP_002987824.1 242239643 8086602 complement(2610363..2611256) 1 NC_012880.1 KEGG: eca:ECA2569 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase CitG 2611256 8086602 Dd703_2215 Dickeya dadantii Ech703 triphosphoribosyl-dephospho-CoA synthase CitG YP_002987824.1 2610363 R 579405 CDS YP_002987825.1 242239644 8086603 complement(2611234..2611791) 1 NC_012880.1 KEGG: eca:ECA2570 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; holo-ACP synthase CitX 2611791 8086603 Dd703_2216 Dickeya dadantii Ech703 holo-ACP synthase CitX YP_002987825.1 2611234 R 579405 CDS YP_002987826.1 242239645 8086604 complement(2611802..2613325) 1 NC_012880.1 KEGG: eca:ECA2571 citrate lyase alpha chain; TIGRFAM: citrate lyase subunit alpha; PFAM: citrate lyase subunit alpha; citrate lyase subunit alpha 2613325 8086604 Dd703_2217 Dickeya dadantii Ech703 citrate lyase subunit alpha YP_002987826.1 2611802 R 579405 CDS YP_002987827.1 242239646 8086605 complement(2613349..2614224) 1 NC_012880.1 KEGG: eca:ECA2572 citrate lyase beta chain; TIGRFAM: citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; citrate lyase subunit beta 2614224 8086605 Dd703_2218 Dickeya dadantii Ech703 citrate lyase subunit beta YP_002987827.1 2613349 R 579405 CDS YP_002987828.1 242239647 8086606 complement(2614221..2614514) 1 NC_012880.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 2614514 8086606 Dd703_2219 Dickeya dadantii Ech703 citrate lyase subunit gamma YP_002987828.1 2614221 R 579405 CDS YP_002987829.1 242239648 8086607 complement(2614545..2615588) 1 NC_012880.1 KEGG: eca:ECA2574 [citrate [pro-3s]-lyase] ligase; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; PFAM: citrate lyase ligase domain protein; GCN5-related N-acetyltransferase; cytidylyltransferase; SMART: citrate lyase ligase domain protein; citrate lyase ligase 2615588 8086607 Dd703_2220 Dickeya dadantii Ech703 citrate lyase ligase YP_002987829.1 2614545 R 579405 CDS YP_002987830.1 242239649 8086608 complement(2615656..2616540) 1 NC_012880.1 PFAM: fumarylacetoacetate hydrolase; KEGG: eca:ECA2575 fumarylacetoacetate hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2616540 8086608 Dd703_2221 Dickeya dadantii Ech703 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_002987830.1 2615656 R 579405 CDS YP_002987831.1 242239650 8086609 complement(2616604..2617971) 1 NC_012880.1 PFAM: citrate carrier protein; KEGG: eca:ECA2576 citrate/acetate antiporter; citrate carrier protein 2617971 8086609 Dd703_2222 Dickeya dadantii Ech703 citrate carrier protein YP_002987831.1 2616604 R 579405 CDS YP_002987832.1 242239651 8086610 2618061..2618237 1 NC_012880.1 hypothetical protein 2618237 8086610 Dd703_2223 Dickeya dadantii Ech703 hypothetical protein YP_002987832.1 2618061 D 579405 CDS YP_002987833.1 242239652 8086611 2618398..2620023 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; KEGG: eca:ECA2577 two-component sensor kinase; signal transduction histidine kinase regulating citrate/malate metabolism 2620023 8086611 Dd703_2224 Dickeya dadantii Ech703 signal transduction histidine kinase regulating citrate/malate metabolism YP_002987833.1 2618398 D 579405 CDS YP_002987834.1 242239653 8086612 2620029..2620754 1 NC_012880.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA2578 two-component response regulator; response regulator receiver 2620754 8086612 Dd703_2225 Dickeya dadantii Ech703 response regulator receiver YP_002987834.1 2620029 D 579405 CDS YP_002987835.1 242239654 8086613 complement(2620818..2621639) 1 NC_012880.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ypg:YpAngola_A3076 hypothetical protein; NAD-dependent epimerase/dehydratase 2621639 8086613 Dd703_2226 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002987835.1 2620818 R 579405 CDS YP_002987836.1 242239655 8086614 2622119..2623018 1 NC_012880.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2623018 hisG 8086614 hisG Dickeya dadantii Ech703 ATP phosphoribosyltransferase YP_002987836.1 2622119 D 579405 CDS YP_002987837.1 242239656 8086615 2623024..2624334 1 NC_012880.1 KEGG: eca:ECA2583 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase; histidinol dehydrogenase 2624334 8086615 Dd703_2228 Dickeya dadantii Ech703 histidinol dehydrogenase YP_002987837.1 2623024 D 579405 CDS YP_002987838.1 242239657 8086616 2624331..2625401 1 NC_012880.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2625401 8086616 Dd703_2229 Dickeya dadantii Ech703 histidinol-phosphate aminotransferase YP_002987838.1 2624331 D 579405 CDS YP_002987839.1 242239658 8086617 2625415..2626482 1 NC_012880.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2626482 8086617 Dd703_2230 Dickeya dadantii Ech703 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_002987839.1 2625415 D 579405 CDS YP_002987840.1 242239659 8086618 2626482..2627072 1 NC_012880.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2627072 hisH 8086618 hisH Dickeya dadantii Ech703 imidazole glycerol phosphate synthase subunit HisH YP_002987840.1 2626482 D 579405 CDS YP_002987841.1 242239660 8086619 2627079..2627816 1 NC_012880.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2627816 8086619 Dd703_2232 Dickeya dadantii Ech703 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002987841.1 2627079 D 579405 CDS YP_002987842.1 242239661 8086620 2627798..2628574 1 NC_012880.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2628574 8086620 Dd703_2233 Dickeya dadantii Ech703 imidazole glycerol phosphate synthase subunit HisF YP_002987842.1 2627798 D 579405 CDS YP_002987843.1 242239662 8086621 2628568..2629182 1 NC_012880.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase; KEGG: eca:ECA2589 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; phosphoribosyl-ATP diphosphatase 2629182 8086621 Dd703_2234 Dickeya dadantii Ech703 phosphoribosyl-ATP diphosphatase YP_002987843.1 2628568 D 579405 CDS YP_002987844.1 242239663 8086622 2629431..2630069 1 NC_012880.1 KEGG: plu:plu3101 hypothetical protein; hypothetical protein 2630069 8086622 Dd703_2235 Dickeya dadantii Ech703 hypothetical protein YP_002987844.1 2629431 D 579405 CDS YP_002987845.1 242239664 8086623 complement(2630273..2630560) 1 NC_012880.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2630560 ihfB 8086623 ihfB Dickeya dadantii Ech703 integration host factor subunit beta YP_002987845.1 2630273 R 579405 CDS YP_002987846.1 242239665 8086624 complement(2630651..2632324) 1 NC_012880.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2632324 rpsA 8086624 rpsA Dickeya dadantii Ech703 30S ribosomal protein S1 YP_002987846.1 2630651 R 579405 CDS YP_002987847.1 242239666 8086625 complement(2632422..2633114) 1 NC_012880.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2633114 cmk 8086625 cmk Dickeya dadantii Ech703 cytidylate kinase YP_002987847.1 2632422 R 579405 CDS YP_002987848.1 242239667 8086626 complement(2633298..2634587) 1 NC_012880.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2634587 8086626 Dd703_2239 Dickeya dadantii Ech703 3-phosphoshikimate 1-carboxyvinyltransferase YP_002987848.1 2633298 R 579405 CDS YP_002987849.1 242239668 8086627 complement(2634849..2635934) 1 NC_012880.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2635934 8086627 Dd703_2240 Dickeya dadantii Ech703 phosphoserine aminotransferase YP_002987849.1 2634849 R 579405 CDS YP_002987850.1 242239669 8086628 2636170..2637933 1 NC_012880.1 PFAM: protein of unknown function DUF181; KEGG: eca:ECA2595 hypothetical protein; hypothetical protein 2637933 8086628 Dd703_2241 Dickeya dadantii Ech703 hypothetical protein YP_002987850.1 2636170 D 579405 CDS YP_002987851.1 242239670 8086629 2638708..2639565 1 NC_012880.1 TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; KEGG: eca:ECA2596 formate transporter; formate/nitrite transporter 2639565 8086629 Dd703_2242 Dickeya dadantii Ech703 formate/nitrite transporter YP_002987851.1 2638708 D 579405 CDS YP_002987852.1 242239671 8086630 2639623..2641905 1 NC_012880.1 KEGG: eca:ECA2597 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase 2641905 8086630 Dd703_2243 Dickeya dadantii Ech703 formate acetyltransferase YP_002987852.1 2639623 D 579405 CDS YP_002987853.1 242239672 8086631 complement(2641906..2642031) 1 NC_012880.1 hypothetical protein 2642031 8086631 Dd703_2244 Dickeya dadantii Ech703 hypothetical protein YP_002987853.1 2641906 R 579405 CDS YP_002987854.1 242239673 8086632 2642186..2642926 1 NC_012880.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 2642926 pflA 8086632 pflA Dickeya dadantii Ech703 pyruvate formate lyase-activating enzyme 1 YP_002987854.1 2642186 D 579405 CDS YP_002987855.1 242239674 8086633 2643315..2644250 1 NC_012880.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA2642 LysR family transcriptional regulator; LysR family transcriptional regulator 2644250 8086633 Dd703_2246 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987855.1 2643315 D 579405 CDS YP_002987856.1 242239675 8086634 complement(2644311..2645501) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2643 MFS family transporter; MFS family transporter protein 2645501 8086634 Dd703_2247 Dickeya dadantii Ech703 MFS family transporter protein YP_002987856.1 2644311 R 579405 CDS YP_002987857.1 242239676 8086637 2646528..2647172 1 NC_012880.1 KEGG: rpi:Rpic_1321 hypothetical protein; hypothetical protein 2647172 8086637 Dd703_2250 Dickeya dadantii Ech703 hypothetical protein YP_002987857.1 2646528 D 579405 CDS YP_002987858.1 242239677 8086638 2647327..2647932 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: swi:Swit_0510 glutathione S-transferase domain-containing protein; glutathione transferase 2647932 8086638 Dd703_2251 Dickeya dadantii Ech703 glutathione transferase YP_002987858.1 2647327 D 579405 CDS YP_002987859.1 242239678 8086639 complement(2648120..2648734) 1 NC_012880.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: ypy:YPK_3391 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 2648734 8086639 Dd703_2252 Dickeya dadantii Ech703 cytoplasmic chaperone TorD family protein YP_002987859.1 2648120 R 579405 CDS YP_002987860.1 242239679 8086640 complement(2648914..2649774) 1 NC_012880.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: yps:YPTB0807 anaerobic dimethyl sulfoxide reductase, subunit C; DMSO reductase anchor subunit DmsC 2649774 8086640 Dd703_2253 Dickeya dadantii Ech703 DMSO reductase anchor subunit DmsC YP_002987860.1 2648914 R 579405 CDS YP_002987861.1 242239680 8086641 complement(2649776..2650393) 1 NC_012880.1 TIGRFAM: dimethylsulfoxide reductase, chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: esa:ESA_01745 hypothetical protein; dimethylsulfoxide reductase subunit B 2650393 8086641 Dd703_2254 Dickeya dadantii Ech703 dimethylsulfoxide reductase subunit B YP_002987861.1 2649776 R 579405 CDS YP_002987862.1 242239681 8086642 complement(2650405..2652849) 1 NC_012880.1 TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: ent:Ent638_1418 anaerobic dimethyl sulfoxide reductase subunit A; anaerobic dimethyl sulfoxide reductase subunit A 2652849 8086642 Dd703_2255 Dickeya dadantii Ech703 anaerobic dimethyl sulfoxide reductase subunit A YP_002987862.1 2650405 R 579405 CDS YP_002987863.1 242239682 8086643 complement(2653197..2655647) 1 NC_012880.1 TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: spe:Spro_1687 anaerobic dimethyl sulfoxide reductase subunit A; anaerobic dimethyl sulfoxide reductase subunit A 2655647 8086643 Dd703_2256 Dickeya dadantii Ech703 anaerobic dimethyl sulfoxide reductase subunit A YP_002987863.1 2653197 R 579405 CDS YP_002987864.1 242239683 8086644 complement(2656148..2657443) 1 NC_012880.1 KEGG: eca:ECA2644 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 2657443 8086644 Dd703_2257 Dickeya dadantii Ech703 seryl-tRNA synthetase YP_002987864.1 2656148 R 579405 CDS YP_002987865.1 242239684 8086645 complement(2657551..2658894) 1 NC_012880.1 PFAM: ATPase AAA; magnesium chelatase ChlI subunit; SMART: ATPase AAA; KEGG: eca:ECA2645 recombination factor protein RarA; recombination factor protein RarA 2658894 8086645 Dd703_2258 Dickeya dadantii Ech703 recombination factor protein RarA YP_002987865.1 2657551 R 579405 CDS YP_002987866.1 242239685 8086646 complement(2658902..2659516) 1 NC_012880.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 2659516 lolA 8086646 lolA Dickeya dadantii Ech703 outer-membrane lipoprotein carrier protein YP_002987866.1 2658902 R 579405 CDS YP_002987867.1 242239686 8086647 complement(2659672..2663196) 1 NC_012880.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: eca:ECA2647 cell division protein; cell division protein FtsK 2663196 8086647 Dd703_2260 Dickeya dadantii Ech703 cell division protein FtsK YP_002987867.1 2659672 R 579405 CDS YP_002987868.1 242239687 8086648 complement(2663312..2663806) 1 NC_012880.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transporter; leucine-responsive transcriptional regulator 2663806 8086648 Dd703_2261 Dickeya dadantii Ech703 leucine-responsive transcriptional regulator YP_002987868.1 2663312 R 579405 CDS YP_002987869.1 242239688 8086649 2664317..2665276 1 NC_012880.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA2649 thioredoxin reductase; thioredoxin reductase 2665276 8086649 Dd703_2262 Dickeya dadantii Ech703 thioredoxin reductase YP_002987869.1 2664317 D 579405 CDS YP_002987870.1 242239689 8086650 2665501..2667267 1 NC_012880.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 2667267 8086650 Dd703_2263 Dickeya dadantii Ech703 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_002987870.1 2665501 D 579405 CDS YP_002987871.1 242239690 8086651 2667267..2669006 1 NC_012880.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 2669006 8086651 Dd703_2264 Dickeya dadantii Ech703 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_002987871.1 2667267 D 579405 CDS YP_002987872.1 242239691 8086652 2669103..2669819 1 NC_012880.1 KEGG: ypa:YPA_0661 leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 2669819 8086652 Dd703_2265 Dickeya dadantii Ech703 leucyl/phenylalanyl-tRNA/protein transferase YP_002987872.1 2669103 D 579405 CDS YP_002987873.1 242239692 8086653 2669915..2670133 1 NC_012880.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2670133 infA 8086653 infA Dickeya dadantii Ech703 translation initiation factor IF-1 YP_002987873.1 2669915 D 579405 CDS YP_002987874.1 242239693 8086654 complement(2670739..2673018) 1 NC_012880.1 KEGG: eca:ECA2656 ATP-dependent Clp protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase AAA; ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; ATP-dependent Clp protease ATP-binding subunit clpA 2673018 8086654 Dd703_2267 Dickeya dadantii Ech703 ATP-dependent Clp protease ATP-binding subunit clpA YP_002987874.1 2670739 R 579405 CDS YP_002987875.1 242239694 8086655 complement(2673048..2673368) 1 NC_012880.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: eca:ECA2657 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2673368 8086655 Dd703_2268 Dickeya dadantii Ech703 ATP-dependent Clp protease adaptor protein ClpS YP_002987875.1 2673048 R 579405 CDS YP_002987876.1 242239695 8086656 2673715..2673936 1 NC_012880.1 KEGG: stm:STM0943 stress response protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2673936 8086656 Dd703_2269 Dickeya dadantii Ech703 cold-shock DNA-binding domain-containing protein YP_002987876.1 2673715 D 579405 CDS YP_002987877.1 242239696 8086657 complement(2674135..2675796) 1 NC_012880.1 KEGG: eca:ECA2660 hypothetical protein; hypothetical protein 2675796 8086657 Dd703_2270 Dickeya dadantii Ech703 hypothetical protein YP_002987877.1 2674135 R 579405 CDS YP_002987878.1 242239697 8086658 2676082..2677734 1 NC_012880.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2677734 8086658 Dd703_2271 Dickeya dadantii Ech703 hydroxylamine reductase YP_002987878.1 2676082 D 579405 CDS YP_002987879.1 242239698 8086659 2677792..2678799 1 NC_012880.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: eca:ECA2663 HCP oxidoreductase, NADH-dependent; HCP oxidoreductase 2678799 8086659 Dd703_2272 Dickeya dadantii Ech703 HCP oxidoreductase YP_002987879.1 2677792 D 579405 CDS YP_002987880.1 242239699 8086660 2678936..2680411 1 NC_012880.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: eca:ECA2664 hypothetical protein; NAD-dependent epimerase/dehydratase 2680411 8086660 Dd703_2273 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002987880.1 2678936 D 579405 CDS YP_002987881.1 242239700 8086661 complement(2680449..2681291) 1 NC_012880.1 KEGG: eca:ECA2665 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2681291 8086661 Dd703_2274 Dickeya dadantii Ech703 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_002987881.1 2680449 R 579405 CDS YP_002987882.1 242239701 8086662 complement(2681288..2681617) 1 NC_012880.1 PFAM: protein of unknown function DUF74; KEGG: spe:Spro_1658 hypothetical protein; hypothetical protein 2681617 8086662 Dd703_2275 Dickeya dadantii Ech703 hypothetical protein YP_002987882.1 2681288 R 579405 CDS YP_002987883.1 242239702 8086663 2682074..2682823 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2667 arginine transporter ATP-binding subunit; ABC transporter 2682823 8086663 Dd703_2276 Dickeya dadantii Ech703 ABC transporter YP_002987883.1 2682074 D 579405 CDS YP_002987884.1 242239703 8086664 2682841..2683572 1 NC_012880.1 KEGG: eca:ECA2668 arginine-binding periplasmic protein 1; TIGRFAM: cationic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic protein 2683572 8086664 Dd703_2277 Dickeya dadantii Ech703 cationic amino acid ABC transporter periplasmic protein YP_002987884.1 2682841 D 579405 CDS YP_002987885.1 242239704 8086665 2683583..2684299 1 NC_012880.1 with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ 2684299 8086665 Dd703_2278 Dickeya dadantii Ech703 arginine transporter permease subunit ArtQ YP_002987885.1 2683583 D 579405 CDS YP_002987886.1 242239705 8086666 2684299..2684970 1 NC_012880.1 with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM 2684970 artM 8086666 artM Dickeya dadantii Ech703 arginine transporter permease subunit ArtM YP_002987886.1 2684299 D 579405 CDS YP_002987887.1 242239706 8086667 2685245..2685979 1 NC_012880.1 KEGG: eca:ECA2671 arginine-binding periplasmic protein 2; TIGRFAM: cationic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic protein 2685979 8086667 Dd703_2280 Dickeya dadantii Ech703 cationic amino acid ABC transporter periplasmic protein YP_002987887.1 2685245 D 579405 CDS YP_002987888.1 242239707 8086668 2686113..2687291 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_5075 transporter major facilitator family; major facilitator superfamily protein 2687291 8086668 Dd703_2281 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987888.1 2686113 D 579405 CDS YP_002987889.1 242239708 8086670 complement(2688491..2688985) 1 NC_012880.1 KEGG: eca:ECA2673 hypothetical protein; hypothetical protein 2688985 8086670 Dd703_2283 Dickeya dadantii Ech703 hypothetical protein YP_002987889.1 2688491 R 579405 CDS YP_002987890.1 242239709 8086671 complement(2689046..2689891) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2674 putrescine ABC transporter membrane protein; putrescine ABC transporter membrane protein 2689891 8086671 Dd703_2284 Dickeya dadantii Ech703 putrescine ABC transporter membrane protein YP_002987890.1 2689046 R 579405 CDS YP_002987891.1 242239710 8086672 complement(2689888..2690847) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2675 putrescine ABC transporter membrane protein; putrescine ABC transporter membrane protein 2690847 8086672 Dd703_2285 Dickeya dadantii Ech703 putrescine ABC transporter membrane protein YP_002987891.1 2689888 R 579405 CDS YP_002987892.1 242239711 8086673 complement(2690864..2691997) 1 NC_012880.1 part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein 2691997 potG 8086673 potG Dickeya dadantii Ech703 putrescine ABC transporter ATP-binding protein YP_002987892.1 2690864 R 579405 CDS YP_002987893.1 242239712 8086674 complement(2692119..2693228) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE1484 putrescine ABC transporter periplasmic substrate-binding protein; putrescine ABC transporter periplasmic-binding protein 2693228 8086674 Dd703_2287 Dickeya dadantii Ech703 putrescine ABC transporter periplasmic-binding protein YP_002987893.1 2692119 R 579405 CDS YP_002987894.1 242239713 8086675 complement(2693622..2694101) 1 NC_012880.1 KEGG: eca:ECA2678 hypothetical protein; hypothetical protein 2694101 8086675 Dd703_2288 Dickeya dadantii Ech703 hypothetical protein YP_002987894.1 2693622 R 579405 CDS YP_002987895.1 242239714 8086676 complement(2694218..2695120) 1 NC_012880.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; KEGG: eca:ECA2679 ribosomal protein S6 modification protein; alpha-L-glutamate ligase 2695120 8086676 Dd703_2289 Dickeya dadantii Ech703 alpha-L-glutamate ligase YP_002987895.1 2694218 R 579405 CDS YP_002987896.1 242239715 8086677 complement(2695133..2695855) 1 NC_012880.1 PFAM: nitroreductase; KEGG: stm:STM0874 nitroreductase A; nitroreductase 2695855 8086677 Dd703_2290 Dickeya dadantii Ech703 nitroreductase YP_002987896.1 2695133 R 579405 CDS YP_002987897.1 242239716 8086678 2696243..2696506 1 NC_012880.1 TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin; KEGG: eca:ECA2681 glutaredoxin 1; GrxA family glutaredoxin 2696506 8086678 Dd703_2291 Dickeya dadantii Ech703 GrxA family glutaredoxin YP_002987897.1 2696243 D 579405 CDS YP_002987898.1 242239717 8086679 complement(2696643..2697014) 1 NC_012880.1 KEGG: eca:ECA2682 hypothetical protein; hypothetical protein 2697014 8086679 Dd703_2292 Dickeya dadantii Ech703 hypothetical protein YP_002987898.1 2696643 R 579405 CDS YP_002987899.1 242239718 8086680 2697409..2699097 1 NC_012880.1 TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein; KEGG: eca:ECA2683 hypothetical protein; hypothetical protein 2699097 8086680 Dd703_2293 Dickeya dadantii Ech703 hypothetical protein YP_002987899.1 2697409 D 579405 CDS YP_002987900.1 242239719 8086681 2699705..2700484 1 NC_012880.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eca:ECA2685 DNA-binding transcriptional repressor DeoR; DNA-binding transcriptional repressor DeoR 2700484 8086681 Dd703_2294 Dickeya dadantii Ech703 DNA-binding transcriptional repressor DeoR YP_002987900.1 2699705 D 579405 CDS YP_002987901.1 242239720 8086682 complement(2700520..2701725) 1 NC_012880.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: eca:ECA2686 penicillin-binding protein 6; beta-lactamase 2701725 8086682 Dd703_2295 Dickeya dadantii Ech703 beta-lactamase YP_002987901.1 2700520 R 579405 CDS YP_002987902.1 242239721 8086683 2702413..2703231 1 NC_012880.1 PFAM: alpha/beta hydrolase fold; KEGG: psp:PSPPH_3042 3-hydroxyacyl-CoA-acyl carrier protein transferase; alpha/beta hydrolase fold protein 2703231 8086683 Dd703_2296 Dickeya dadantii Ech703 alpha/beta hydrolase fold protein YP_002987902.1 2702413 D 579405 CDS YP_002987903.1 242239722 8086684 complement(2703443..2704102) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2687 ABC transporter integral membrane protein; binding-protein-dependent transporters inner membrane component 2704102 8086684 Dd703_2297 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987903.1 2703443 R 579405 CDS YP_002987904.1 242239723 8086685 complement(2704095..2705111) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2688 ABC transporter ATP-binding protein; ABC transporter 2705111 8086685 Dd703_2298 Dickeya dadantii Ech703 ABC transporter YP_002987904.1 2704095 R 579405 CDS YP_002987905.1 242239724 8086686 complement(2705208..2706053) 1 NC_012880.1 PFAM: NLPA lipoprotein; KEGG: eca:ECA2689 lipoprotein; NLPA lipoprotein 2706053 8086686 Dd703_2299 Dickeya dadantii Ech703 NLPA lipoprotein YP_002987905.1 2705208 R 579405 CDS YP_002987906.1 242239725 8086687 2706339..2706956 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: eca:ECA2690 glutathione S-transferase; glutathione S-transferase domain-containing protein 2706956 8086687 Dd703_2300 Dickeya dadantii Ech703 glutathione S-transferase domain-containing protein YP_002987906.1 2706339 D 579405 CDS YP_002987907.1 242239726 8086688 complement(2707121..2708089) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:H16_A3224 transcriptional regulator, LysR-family; LysR family transcriptional regulator 2708089 8086688 Dd703_2301 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987907.1 2707121 R 579405 CDS YP_002987908.1 242239727 8086689 2708292..2710124 1 NC_012880.1 PFAM: Tannase and feruloyl esterase; KEGG: ara:Arad_12198 feruloyl esterase; tannase and feruloyl esterase 2710124 8086689 Dd703_2302 Dickeya dadantii Ech703 tannase and feruloyl esterase YP_002987908.1 2708292 D 579405 CDS YP_002987909.1 242239728 8086690 2710380..2711783 1 NC_012880.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 2711783 rimO 8086690 rimO Dickeya dadantii Ech703 30S ribosomal protein S12 methylthiotransferase YP_002987909.1 2710380 D 579405 CDS YP_002987910.1 242239729 8086691 2711989..2712741 1 NC_012880.1 PFAM: protein of unknown function DUF218; KEGG: eca:ECA2709 hypothetical protein; hypothetical protein 2712741 8086691 Dd703_2304 Dickeya dadantii Ech703 hypothetical protein YP_002987910.1 2711989 D 579405 CDS YP_002987911.1 242239730 8086692 complement(2712756..2713931) 1 NC_012880.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: eca:ECA2710 hypothetical protein; hypothetical protein 2713931 8086692 Dd703_2305 Dickeya dadantii Ech703 hypothetical protein YP_002987911.1 2712756 R 579405 CDS YP_002987912.1 242239731 8086693 complement(2714064..2714732) 1 NC_012880.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2714732 folE 8086693 folE Dickeya dadantii Ech703 GTP cyclohydrolase I YP_002987912.1 2714064 R 579405 CDS YP_002987913.1 242239732 8086694 complement(2715049..2716725) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1509 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2716725 8086694 Dd703_2307 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987913.1 2715049 R 579405 CDS YP_002987914.1 242239733 8086695 complement(2717195..2718877) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA2712 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2718877 8086695 Dd703_2308 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002987914.1 2717195 R 579405 CDS YP_002987915.1 242239734 8086696 complement(2719364..2720053) 1 NC_012880.1 KEGG: eca:ECA2712 methyl-accepting chemotaxis protein; hypothetical protein 2720053 8086696 Dd703_2309 Dickeya dadantii Ech703 hypothetical protein YP_002987915.1 2719364 R 579405 CDS YP_002987916.1 242239735 8086697 2720489..2721352 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2713 LysR family transcriptional regulator; LysR family transcriptional regulator 2721352 8086697 Dd703_2310 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987916.1 2720489 D 579405 CDS YP_002987917.1 242239736 8086698 2721428..2722549 1 NC_012880.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: spe:Spro_1557 S-(hydroxymethyl)glutathione dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2722549 8086698 Dd703_2311 Dickeya dadantii Ech703 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_002987917.1 2721428 D 579405 CDS YP_002987918.1 242239737 8086699 2722563..2723405 1 NC_012880.1 KEGG: ypi:YpsIP31758_2474 S-formylglutathione hydrolase; TIGRFAM: S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase 2723405 8086699 Dd703_2312 Dickeya dadantii Ech703 S-formylglutathione hydrolase YP_002987918.1 2722563 D 579405 CDS YP_002987919.1 242239738 8086700 2723870..2724082 1 NC_012880.1 KEGG: eca:ECA2717 hypothetical protein; hypothetical protein 2724082 8086700 Dd703_2313 Dickeya dadantii Ech703 hypothetical protein YP_002987919.1 2723870 D 579405 CDS YP_002987920.1 242239739 8086701 complement(2724269..2725354) 1 NC_012880.1 member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 2725354 8086701 Dd703_2314 Dickeya dadantii Ech703 hypothetical protein YP_002987920.1 2724269 R 579405 CDS YP_002987921.1 242239740 8086702 2725598..2727109 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2719 ABC transporter ATP-binding protein; ABC transporter 2727109 8086702 Dd703_2315 Dickeya dadantii Ech703 ABC transporter YP_002987921.1 2725598 D 579405 CDS YP_002987922.1 242239741 8086703 2727106..2728101 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: eca:ECA2720 ABC transporter permease; inner-membrane translocator 2728101 8086703 Dd703_2316 Dickeya dadantii Ech703 inner-membrane translocator YP_002987922.1 2727106 D 579405 CDS YP_002987923.1 242239742 8086704 complement(2728270..2729343) 1 NC_012880.1 KEGG: bha:BH1839 hypothetical protein; hypothetical protein 2729343 8086704 Dd703_2317 Dickeya dadantii Ech703 hypothetical protein YP_002987923.1 2728270 R 579405 CDS YP_002987924.1 242239743 8086705 complement(2729340..2730086) 1 NC_012880.1 PFAM: catalytic domain of components of various dehydrogenase complexes; KEGG: bha:BH1847 hypothetical protein; hypothetical protein 2730086 8086705 Dd703_2318 Dickeya dadantii Ech703 hypothetical protein YP_002987924.1 2729340 R 579405 CDS YP_002987925.1 242239744 8086706 complement(2730064..2730303) 1 NC_012880.1 hypothetical protein 2730303 8086706 Dd703_2319 Dickeya dadantii Ech703 hypothetical protein YP_002987925.1 2730064 R 579405 CDS YP_002987926.1 242239745 8086707 complement(2730306..2732054) 1 NC_012880.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: bha:BH1845 hypothetical protein; FkbH-like protein 2732054 8086707 Dd703_2320 Dickeya dadantii Ech703 FkbH-like protein YP_002987926.1 2730306 R 579405 CDS YP_002987927.1 242239746 8086708 complement(2732222..2733247) 1 NC_012880.1 KEGG: bha:BH1844 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 2733247 8086708 Dd703_2321 Dickeya dadantii Ech703 3-oxoacyl-ACP synthase YP_002987927.1 2732222 R 579405 CDS YP_002987928.1 242239747 8086709 2733914..2735095 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3194 sugar efflux transporter; sugar efflux transporter 2735095 8086709 Dd703_2322 Dickeya dadantii Ech703 sugar efflux transporter YP_002987928.1 2733914 D 579405 CDS YP_002987929.1 242239748 8086710 complement(2735221..2736699) 1 NC_012880.1 PFAM: amino acid permease-associated region; KEGG: yps:YPTB1340 lysine transporter; lysine transporter 2736699 8086710 Dd703_2323 Dickeya dadantii Ech703 lysine transporter YP_002987929.1 2735221 R 579405 CDS YP_002987930.1 242239749 8086711 complement(2736869..2737729) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2724 DNA-binding transcriptional regulator; DNA-binding transcriptional regulator 2737729 8086711 Dd703_2324 Dickeya dadantii Ech703 DNA-binding transcriptional regulator YP_002987930.1 2736869 R 579405 CDS YP_002987931.1 242239750 8086712 2737842..2738921 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA2725 hypothetical protein; hypothetical protein 2738921 8086712 Dd703_2325 Dickeya dadantii Ech703 hypothetical protein YP_002987931.1 2737842 D 579405 CDS YP_002987932.1 242239751 8086713 2738967..2739833 1 NC_012880.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 2739833 8086713 Dd703_2326 Dickeya dadantii Ech703 endonuclease IV YP_002987932.1 2738967 D 579405 CDS YP_002987933.1 242239752 8086714 complement(2739950..2741638) 1 NC_012880.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunit IIBC 2741638 8086714 Dd703_2327 Dickeya dadantii Ech703 PTS system fructose-specific transporter subunit IIBC YP_002987933.1 2739950 R 579405 CDS YP_002987934.1 242239753 8086715 complement(2741655..2742593) 1 NC_012880.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 2742593 fruK 8086715 fruK Dickeya dadantii Ech703 1-phosphofructokinase YP_002987934.1 2741655 R 579405 CDS YP_002987935.1 242239754 8086716 complement(2742590..2743723) 1 NC_012880.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 2743723 8086716 Dd703_2329 Dickeya dadantii Ech703 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein YP_002987935.1 2742590 R 579405 CDS YP_002987936.1 242239755 8086717 2744053..2745231 1 NC_012880.1 TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2730 sugar efflux transporter; sugar efflux transporter 2745231 8086717 Dd703_2330 Dickeya dadantii Ech703 sugar efflux transporter YP_002987936.1 2744053 D 579405 CDS YP_002987937.1 242239756 8086718 complement(2745243..2745500) 1 NC_012880.1 PFAM: protein of unknown function UPF0153; KEGG: eca:ECA2731 hypothetical protein; hypothetical protein 2745500 8086718 Dd703_2331 Dickeya dadantii Ech703 hypothetical protein YP_002987937.1 2745243 R 579405 CDS YP_002987938.1 242239757 8086719 2745675..2746247 1 NC_012880.1 TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: spe:Spro_3237 elongation factor P-like protein YeiP; elongation factor P-like protein YeiP 2746247 8086719 Dd703_2332 Dickeya dadantii Ech703 elongation factor P-like protein YeiP YP_002987938.1 2745675 D 579405 CDS YP_002987939.1 242239758 8086720 2746311..2747285 1 NC_012880.1 PFAM: cobalamin synthesis protein P47K; KEGG: eca:ECA2733 hypothetical protein; cobalamin synthesis protein P47K 2747285 8086720 Dd703_2333 Dickeya dadantii Ech703 cobalamin synthesis protein P47K YP_002987939.1 2746311 D 579405 CDS YP_002987940.1 242239759 8086721 2747335..2748039 1 NC_012880.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: eca:ECA2734 membrane-bound phosphatase; PA-phosphatase-like phosphoesterase 2748039 8086721 Dd703_2334 Dickeya dadantii Ech703 PA-phosphatase-like phosphoesterase YP_002987940.1 2747335 D 579405 CDS YP_002987941.1 242239760 8086722 2748444..2749019 1 NC_012880.1 by similarity, Spr seems to have peptidase activity; involved in thermoresistance; outer membrane lipoprotein 2749019 spr 8086722 spr Dickeya dadantii Ech703 outer membrane lipoprotein YP_002987941.1 2748444 D 579405 CDS YP_002987942.1 242239761 8086723 2749316..2751127 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2736 ABC transporter periplasmic protein; family 5 extracellular solute-binding protein 2751127 8086723 Dd703_2336 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002987942.1 2749316 D 579405 CDS YP_002987943.1 242239762 8086724 2751137..2752231 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2737 binding-protein-dependent transporter; binding-protein-dependent transporters inner membrane component 2752231 8086724 Dd703_2337 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987943.1 2751137 D 579405 CDS YP_002987944.1 242239763 8086725 2752228..2753253 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2738 ABC transporter permease; binding-protein-dependent transporters inner membrane component 2753253 8086725 Dd703_2338 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002987944.1 2752228 D 579405 CDS YP_002987945.1 242239764 8086726 2753255..2754847 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2739 ABC-transporter ATP-binding protein; ABC transporter 2754847 8086726 Dd703_2339 Dickeya dadantii Ech703 ABC transporter YP_002987945.1 2753255 D 579405 CDS YP_002987946.1 242239765 8086727 2755459..2755737 1 NC_012880.1 PFAM: transposase IS3/IS911 family protein; KEGG: ecx:EcHS_A4530 ISEhe3, transposase orfA; transposase IS3/IS911 family protein 2755737 8086727 Dd703_2340 Dickeya dadantii Ech703 transposase IS3/IS911 family protein YP_002987946.1 2755459 D 579405 CDS YP_002987947.1 242239766 8086728 2755794..2756603 1 NC_012880.1 PFAM: Integrase catalytic region; KEGG: ecx:EcHS_A4529 ISEhe3, transposase orfB; Integrase catalytic subunit 2756603 8086728 Dd703_2341 Dickeya dadantii Ech703 Integrase catalytic subunit YP_002987947.1 2755794 D 579405 CDS YP_002987948.1 242239767 8086729 2757002..2757547 1 NC_012880.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: xcb:XC_2435 hypothetical protein; exonuclease RNase T and DNA polymerase III 2757547 8086729 Dd703_2342 Dickeya dadantii Ech703 exonuclease RNase T and DNA polymerase III YP_002987948.1 2757002 D 579405 CDS YP_002987949.1 242239768 8086730 complement(2757544..2758035) 1 NC_012880.1 KEGG: pla:Plav_0317 hypothetical protein; hypothetical protein 2758035 8086730 Dd703_2343 Dickeya dadantii Ech703 hypothetical protein YP_002987949.1 2757544 R 579405 CDS YP_002987950.1 242239769 8086731 complement(2758032..2759807) 1 NC_012880.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: pap:PSPA7_0134 ThiF family protein; UBA/THIF-type NAD/FAD binding protein 2759807 8086731 Dd703_2344 Dickeya dadantii Ech703 UBA/THIF-type NAD/FAD binding protein YP_002987950.1 2758032 R 579405 CDS YP_002987951.1 242239770 8086732 complement(2759800..2761050) 1 NC_012880.1 KEGG: pap:PSPA7_0135 hypothetical protein; hypothetical protein 2761050 8086732 Dd703_2345 Dickeya dadantii Ech703 hypothetical protein YP_002987951.1 2759800 R 579405 CDS YP_002987952.1 242239771 8086733 complement(2761050..2762225) 1 NC_012880.1 KEGG: pap:PSPA7_0136 hypothetical protein; hypothetical protein 2762225 8086733 Dd703_2346 Dickeya dadantii Ech703 hypothetical protein YP_002987952.1 2761050 R 579405 CDS YP_002987953.1 242239772 8086734 complement(2762465..2762974) 1 NC_012880.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rso:RSc2620 hypothetical protein; DNA repair protein RadC 2762974 8086734 Dd703_2347 Dickeya dadantii Ech703 DNA repair protein RadC YP_002987953.1 2762465 R 579405 CDS YP_002987954.1 242239773 8086735 complement(2763309..2764475) 1 NC_012880.1 PFAM: protein of unknown function DUF1016; KEGG: zmo:ZMO1931 hypothetical protein; hypothetical protein 2764475 8086735 Dd703_2348 Dickeya dadantii Ech703 hypothetical protein YP_002987954.1 2763309 R 579405 CDS YP_002987955.1 242239774 8086737 complement(2765882..2766235) 1 NC_012880.1 KEGG: eca:ECA2740 hypothetical protein; hypothetical protein 2766235 8086737 Dd703_2350 Dickeya dadantii Ech703 hypothetical protein YP_002987955.1 2765882 R 579405 CDS YP_002987956.1 242239775 8086738 complement(2766548..2767744) 1 NC_012880.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein 2767744 8086738 Dd703_2351 Dickeya dadantii Ech703 bicyclomycin/multidrug efflux system protein YP_002987956.1 2766548 R 579405 CDS YP_002987957.1 242239776 8086739 complement(2767811..2768509) 1 NC_012880.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 2768509 8086739 Dd703_2352 Dickeya dadantii Ech703 16S rRNA pseudouridylate synthase A YP_002987957.1 2767811 R 579405 CDS YP_002987958.1 242239777 8086740 2768683..2768922 1 NC_012880.1 KEGG: eca:ECA2743 hypothetical protein; hypothetical protein 2768922 8086740 Dd703_2353 Dickeya dadantii Ech703 hypothetical protein YP_002987958.1 2768683 D 579405 CDS YP_002987959.1 242239778 8086741 2768922..2770682 1 NC_012880.1 PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicase ; helicase; KEGG: eca:ECA2744 helicase; type III restriction protein res subunit 2770682 8086741 Dd703_2354 Dickeya dadantii Ech703 type III restriction protein res subunit YP_002987959.1 2768922 D 579405 CDS YP_002987960.1 242239779 8086742 2770845..2771132 1 NC_012880.1 PFAM: ribosomal protein L25; KEGG: kpe:KPK_1543 ribosomal L25p family; 50S ribosomal protein L25 2771132 8086742 Dd703_2355 Dickeya dadantii Ech703 50S ribosomal protein L25 YP_002987960.1 2770845 D 579405 CDS YP_002987961.1 242239780 8086743 complement(2771290..2772507) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2430 hypothetical protein; major facilitator superfamily protein 2772507 8086743 Dd703_2356 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987961.1 2771290 R 579405 CDS YP_002987962.1 242239781 8086744 complement(2772712..2773446) 1 NC_012880.1 PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: kpn:KPN_02737 2-component transcriptional regulator; LytTR family two component transcriptional regulator 2773446 8086744 Dd703_2357 Dickeya dadantii Ech703 LytTR family two component transcriptional regulator YP_002987962.1 2772712 R 579405 CDS YP_002987963.1 242239782 8086745 complement(2773466..2775166) 1 NC_012880.1 KEGG: eta:ETA_11160 sensor protein; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS 2775166 8086745 Dd703_2358 Dickeya dadantii Ech703 signal transduction histidine kinase LytS YP_002987963.1 2773466 R 579405 CDS YP_002987964.1 242239783 8086746 complement(2775279..2776289) 1 NC_012880.1 PFAM: 37kDa nucleoid-associated protein; KEGG: eca:ECA2747 nucleoid-associated protein NdpA; nucleoid-associated protein NdpA 2776289 8086746 Dd703_2359 Dickeya dadantii Ech703 nucleoid-associated protein NdpA YP_002987964.1 2775279 R 579405 CDS YP_002987965.1 242239784 8086747 2776438..2776665 1 NC_012880.1 PFAM: protein of unknown function DUF1414; KEGG: yen:YE1420 hypothetical protein; hypothetical protein 2776665 8086747 Dd703_2360 Dickeya dadantii Ech703 hypothetical protein YP_002987965.1 2776438 D 579405 CDS YP_002987966.1 242239785 8086748 2776680..2778452 1 NC_012880.1 PFAM: sulfatase; KEGG: eca:ECA2749 sulphatase; sulfatase 2778452 8086748 Dd703_2361 Dickeya dadantii Ech703 sulfatase YP_002987966.1 2776680 D 579405 CDS YP_002987967.1 242239786 8086750 2778795..2780045 1 NC_012880.1 PFAM: integrase family protein; KEGG: eca:ECA2750 prophage integrase; integrase family protein 2780045 8086750 Dd703_2362 Dickeya dadantii Ech703 integrase family protein YP_002987967.1 2778795 D 579405 CDS YP_002987968.1 242239787 8086751 2780191..2780859 1 NC_012880.1 KEGG: ypb:YPTS_3242 hypothetical protein; hypothetical protein 2780859 8086751 Dd703_2363 Dickeya dadantii Ech703 hypothetical protein YP_002987968.1 2780191 D 579405 CDS YP_002987969.1 242239788 8086752 2781047..2781259 1 NC_012880.1 PFAM: prophage CP4-57 regulator; KEGG: eca:ECA2752 hypothetical protein; phage transcriptional regulator AlpA 2781259 8086752 Dd703_2364 Dickeya dadantii Ech703 phage transcriptional regulator AlpA YP_002987969.1 2781047 D 579405 CDS YP_002987970.1 242239789 8086753 complement(2781450..2781641) 1 NC_012880.1 KEGG: ecr:ECIAI1_1591 conserved hypothetical protein; Qin prophage; hypothetical protein 2781641 8086753 Dd703_2365 Dickeya dadantii Ech703 hypothetical protein YP_002987970.1 2781450 R 579405 CDS YP_002987971.1 242239790 8086754 2781831..2782031 1 NC_012880.1 KEGG: ecg:E2348C_3903 hypothetical protein; hypothetical protein 2782031 8086754 Dd703_2366 Dickeya dadantii Ech703 hypothetical protein YP_002987971.1 2781831 D 579405 CDS YP_002987972.1 242239791 8086755 2782024..2782224 1 NC_012880.1 KEGG: eca:ECA1671 hypothetical protein; hypothetical protein 2782224 8086755 Dd703_2367 Dickeya dadantii Ech703 hypothetical protein YP_002987972.1 2782024 D 579405 CDS YP_002987973.1 242239792 8086756 2782217..2784853 1 NC_012880.1 PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein; KEGG: eta:ETA_24220 prophage primase; hypothetical protein 2784853 8086756 Dd703_2368 Dickeya dadantii Ech703 hypothetical protein YP_002987973.1 2782217 D 579405 CDS YP_002987974.1 242239793 8086757 2785264..2785593 1 NC_012880.1 KEGG: ppd:Ppro_3130 hypothetical protein; hypothetical protein 2785593 8086757 Dd703_2369 Dickeya dadantii Ech703 hypothetical protein YP_002987974.1 2785264 D 579405 CDS YP_002987975.1 242239794 8086758 complement(2786111..2787475) 1 NC_012880.1 SMART: ATPase AAA; KEGG: pmr:PMI2355 hypothetical protein; ATPase AAA 2787475 8086758 Dd703_2370 Dickeya dadantii Ech703 ATPase AAA YP_002987975.1 2786111 R 579405 CDS YP_002987976.1 242239795 8086759 complement(2787472..2788422) 1 NC_012880.1 KEGG: pmr:PMI2356 reverse transcriptase; reverse transcriptase 2788422 8086759 Dd703_2371 Dickeya dadantii Ech703 reverse transcriptase YP_002987976.1 2787472 R 579405 CDS YP_002987977.1 242239796 8086760 2789180..2789788 1 NC_012880.1 KEGG: sbc:SbBS512_E4092 hypothetical protein; hypothetical protein 2789788 8086760 Dd703_2372 Dickeya dadantii Ech703 hypothetical protein YP_002987977.1 2789180 D 579405 CDS YP_002987978.1 242239797 8086761 2789857..2790345 1 NC_012880.1 KEGG: bam:Bamb_1706 hypothetical protein; hypothetical protein 2790345 8086761 Dd703_2373 Dickeya dadantii Ech703 hypothetical protein YP_002987978.1 2789857 D 579405 CDS YP_002987979.1 242239798 8086763 complement(2790944..2791255) 1 NC_012880.1 KEGG: ent:Ent638_1881 hypothetical protein; hypothetical protein 2791255 8086763 Dd703_2375 Dickeya dadantii Ech703 hypothetical protein YP_002987979.1 2790944 R 579405 CDS YP_002987980.1 242239799 8086764 2791746..2791850 1 NC_012880.1 hypothetical protein 2791850 8086764 Dd703_2376 Dickeya dadantii Ech703 hypothetical protein YP_002987980.1 2791746 D 579405 CDS YP_002987981.1 242239800 8086765 2792098..2792628 1 NC_012880.1 KEGG: hin:HI1492 hypothetical protein; hypothetical protein 2792628 8086765 Dd703_2377 Dickeya dadantii Ech703 hypothetical protein YP_002987981.1 2792098 D 579405 CDS YP_002987982.1 242239801 8086766 complement(2792656..2793000) 1 NC_012880.1 PFAM: GlpM family protein; KEGG: eca:ECA0108 hypothetical protein; GlpM family protein 2793000 8086766 Dd703_2378 Dickeya dadantii Ech703 GlpM family protein YP_002987982.1 2792656 R 579405 CDS YP_002987983.1 242239802 8086767 complement(2793426..2793908) 1 NC_012880.1 PFAM: heat shock protein Hsp20; KEGG: ses:SARI_01731 hypothetical protein; heat shock protein Hsp20 2793908 8086767 Dd703_2379 Dickeya dadantii Ech703 heat shock protein Hsp20 YP_002987983.1 2793426 R 579405 CDS YP_002987984.1 242239803 8086768 complement(2794183..2795481) 1 NC_012880.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bmj:BMULJ_02890 hypothetical protein; cytosine/purines uracil thiamine allantoin permease 2795481 8086768 Dd703_2380 Dickeya dadantii Ech703 cytosine/purines uracil thiamine allantoin permease YP_002987984.1 2794183 R 579405 CDS YP_002987985.1 242239804 8086769 complement(2795635..2796612) 1 NC_012880.1 KEGG: pap:PSPA7_0599 biotin-dependent carboxylase domain-containing protein; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; SMART: allophanate hydrolase subunit 2; urea amidolyase-like protein 2796612 8086769 Dd703_2381 Dickeya dadantii Ech703 urea amidolyase-like protein YP_002987985.1 2795635 R 579405 CDS YP_002987986.1 242239805 8086770 complement(2796602..2797483) 1 NC_012880.1 PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: pag:PLES_04911 hydrolase; allophanate hydrolase subunit 1 2797483 8086770 Dd703_2382 Dickeya dadantii Ech703 allophanate hydrolase subunit 1 YP_002987986.1 2796602 R 579405 CDS YP_002987987.1 242239806 8086771 complement(2797485..2798873) 1 NC_012880.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2798873 8086771 Dd703_2383 Dickeya dadantii Ech703 acetyl-CoA carboxylase biotin carboxylase subunit YP_002987987.1 2797485 R 579405 CDS YP_002987988.1 242239807 8086772 complement(2798919..2799167) 1 NC_012880.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vei:Veis_4578 hypothetical protein; biotin/lipoyl attachment domain-containing protein 2799167 8086772 Dd703_2384 Dickeya dadantii Ech703 biotin/lipoyl attachment domain-containing protein YP_002987988.1 2798919 R 579405 CDS YP_002987989.1 242239808 8086773 complement(2799186..2799980) 1 NC_012880.1 PFAM: LamB/YcsF family protein; KEGG: pae:PA0492 hypothetical protein; hypothetical protein 2799980 8086773 Dd703_2385 Dickeya dadantii Ech703 hypothetical protein YP_002987989.1 2799186 R 579405 CDS YP_002987990.1 242239809 8086774 2800105..2801019 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppf:Pput_2773 LysR family transcriptional regulator; LysR family transcriptional regulator 2801019 8086774 Dd703_2386 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002987990.1 2800105 D 579405 CDS YP_002987991.1 242239810 8086775 complement(2801016..2802170) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2763 transporter; major facilitator superfamily protein 2802170 8086775 Dd703_2387 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002987991.1 2801016 R 579405 CDS YP_002987992.1 242239811 8086776 2802255..2802749 1 NC_012880.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmn:BMA10247_0906 MarR family transcriptional regulator; MarR family transcriptional regulator 2802749 8086776 Dd703_2388 Dickeya dadantii Ech703 MarR family transcriptional regulator YP_002987992.1 2802255 D 579405 CDS YP_002987993.1 242239812 8086777 complement(2802867..2803382) 1 NC_012880.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X 2803382 ompX 8086777 ompX Dickeya dadantii Ech703 outer membrane protein X YP_002987993.1 2802867 R 579405 CDS YP_002987994.1 242239813 8086778 2803755..2804621 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2765 threonine and homoserine efflux system; hypothetical protein 2804621 8086778 Dd703_2390 Dickeya dadantii Ech703 hypothetical protein YP_002987994.1 2803755 D 579405 CDS YP_002987995.1 242239814 8086779 2805040..2805786 1 NC_012880.1 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 2805786 glnH 8086779 glnH Dickeya dadantii Ech703 glutamine ABC transporter periplasmic protein YP_002987995.1 2805040 D 579405 CDS YP_002987996.1 242239815 8086780 2805872..2806531 1 NC_012880.1 similar to permease of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 2806531 glnP 8086780 glnP Dickeya dadantii Ech703 glutamine ABC transporter permease YP_002987996.1 2805872 D 579405 CDS YP_002987997.1 242239816 8086781 2806528..2807250 1 NC_012880.1 similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 2807250 glnQ 8086781 glnQ Dickeya dadantii Ech703 glutamine ABC transporter ATP-binding protein YP_002987997.1 2806528 D 579405 CDS YP_002987998.1 242239817 8086782 2807508..2809250 1 NC_012880.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: afw:Anae109_2327 cell surface receptor IPT/TIG domain-containing protein; fibronectin type III domain-containing protein 2809250 8086782 Dd703_2394 Dickeya dadantii Ech703 fibronectin type III domain-containing protein YP_002987998.1 2807508 D 579405 CDS YP_002987999.1 242239818 8086783 complement(2809366..2810763) 1 NC_012880.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: eca:ECA2062 phosphatase; PA-phosphatase-like phosphoesterase 2810763 8086783 Dd703_2395 Dickeya dadantii Ech703 PA-phosphatase-like phosphoesterase YP_002987999.1 2809366 R 579405 CDS YP_002988000.1 242239819 8086784 complement(2811190..2813049) 1 NC_012880.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: eca:ECA2771 peptidase; peptidase M3A and M3B thimet/oligopeptidase F 2813049 8086784 Dd703_2396 Dickeya dadantii Ech703 peptidase M3A and M3B thimet/oligopeptidase F YP_002988000.1 2811190 R 579405 CDS YP_002988001.1 242239820 8086785 complement(2813079..2814047) 1 NC_012880.1 PFAM: glycosyl transferase, family 3-like; KEGG: eca:ECA2772 hypothetical protein; glycosyl transferase family protein 2814047 8086785 Dd703_2397 Dickeya dadantii Ech703 glycosyl transferase family protein YP_002988001.1 2813079 R 579405 CDS YP_002988002.1 242239821 8086786 complement(2814231..2816378) 1 NC_012880.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 2816378 dinG 8086786 dinG Dickeya dadantii Ech703 ATP-dependent DNA helicase DinG YP_002988002.1 2814231 R 579405 CDS YP_002988003.1 242239822 8086787 2816522..2817355 1 NC_012880.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA2787 AraC family transcription regulator; AraC family transcriptional regulator 2817355 8086787 Dd703_2399 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002988003.1 2816522 D 579405 CDS YP_002988004.1 242239823 8086788 2817404..2818048 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA2788 LysE family translocator; lysine exporter protein LysE/YggA 2818048 8086788 Dd703_2400 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002988004.1 2817404 D 579405 CDS YP_002988005.1 242239824 8086789 2818099..2818206 1 NC_012880.1 hypothetical protein 2818206 8086789 Dd703_2401 Dickeya dadantii Ech703 hypothetical protein YP_002988005.1 2818099 D 579405 CDS YP_002988006.1 242239825 8086790 complement(2818268..2820577) 1 NC_012880.1 PFAM: glycoside hydrolase; KEGG: eca:ECA2790 periplasmic beta-glucosidase; glycoside hydrolase 2820577 8086790 Dd703_2402 Dickeya dadantii Ech703 glycoside hydrolase YP_002988006.1 2818268 R 579405 CDS YP_002988007.1 242239826 8086791 complement(2821052..2822395) 1 NC_012880.1 PFAM: aminotransferase class-III; KEGG: eta:ETA_34300 aminotransferase; class III aminotransferase 2822395 8086791 Dd703_2403 Dickeya dadantii Ech703 class III aminotransferase YP_002988007.1 2821052 R 579405 CDS YP_002988008.1 242239827 8086792 2822929..2823705 1 NC_012880.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: eta:ETA_34310 DeoR family transcriptional regulator; DeoR family transcriptional regulator 2823705 8086792 Dd703_2404 Dickeya dadantii Ech703 DeoR family transcriptional regulator YP_002988008.1 2822929 D 579405 CDS YP_002988009.1 242239828 8086793 2823986..2824669 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: eca:ECA2791 glutathione S-transferase; glutathione S-transferase domain-containing protein 2824669 8086793 Dd703_2405 Dickeya dadantii Ech703 glutathione S-transferase domain-containing protein YP_002988009.1 2823986 D 579405 CDS YP_002988010.1 242239829 8086794 complement(2824798..2825745) 1 NC_012880.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 2825745 pbpG 8086794 pbpG Dickeya dadantii Ech703 D-alanyl-D-alanine endopeptidase YP_002988010.1 2824798 R 579405 CDS YP_002988011.1 242239830 8086795 complement(2825945..2826484) 1 NC_012880.1 TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: eca:ECA2795 adenylate cyclase; adenylyl cyclase CyaB 2826484 8086795 Dd703_2407 Dickeya dadantii Ech703 adenylyl cyclase CyaB YP_002988011.1 2825945 R 579405 CDS YP_002988012.1 242239831 8086796 2826811..2827071 1 NC_012880.1 hypothetical protein 2827071 8086796 Dd703_2408 Dickeya dadantii Ech703 hypothetical protein YP_002988012.1 2826811 D 579405 CDS YP_002988013.1 242239832 8086797 complement(2827432..2827845) 1 NC_012880.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pae:PA1129 fosfomycin resistance protein; glutathione transferase 2827845 8086797 Dd703_2409 Dickeya dadantii Ech703 glutathione transferase YP_002988013.1 2827432 R 579405 CDS YP_002988014.1 242239833 8086798 complement(2827918..2828880) 1 NC_012880.1 PFAM: dihydrouridine synthase; KEGG: kpn:KPN_02581 tRNA-dihydrouridine synthase C; tRNA-dihydrouridine synthase C 2828880 8086798 Dd703_2410 Dickeya dadantii Ech703 tRNA-dihydrouridine synthase C YP_002988014.1 2827918 R 579405 CDS YP_002988015.1 242239834 8086799 complement(2828996..2830591) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2801 periplasmic dipeptide transporter; family 5 extracellular solute-binding protein 2830591 8086799 Dd703_2411 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002988015.1 2828996 R 579405 CDS YP_002988016.1 242239835 8086800 2830716..2831966 1 NC_012880.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2831966 8086800 Dd703_2412 Dickeya dadantii Ech703 peptidase T YP_002988016.1 2830716 D 579405 CDS YP_002988017.1 242239836 8086801 complement(2832038..2833006) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1743 AraC family transcriptional regulator; AraC family transcriptional regulator 2833006 8086801 Dd703_2413 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002988017.1 2832038 R 579405 CDS YP_002988018.1 242239837 8086802 complement(2833180..2833989) 1 NC_012880.1 KEGG: net:Neut_2215 hypothetical protein; hypothetical protein 2833989 8086802 Dd703_2414 Dickeya dadantii Ech703 hypothetical protein YP_002988018.1 2833180 R 579405 CDS YP_002988019.1 242239838 8086803 complement(2833982..2834398) 1 NC_012880.1 hypothetical protein 2834398 8086803 Dd703_2415 Dickeya dadantii Ech703 hypothetical protein YP_002988019.1 2833982 R 579405 CDS YP_002988020.1 242239839 8086804 complement(2834361..2834777) 1 NC_012880.1 hypothetical protein 2834777 8086804 Dd703_2416 Dickeya dadantii Ech703 hypothetical protein YP_002988020.1 2834361 R 579405 CDS YP_002988021.1 242239840 8086805 complement(2834758..2835057) 1 NC_012880.1 hypothetical protein 2835057 8086805 Dd703_2417 Dickeya dadantii Ech703 hypothetical protein YP_002988021.1 2834758 R 579405 CDS YP_002988022.1 242239841 8086806 2835347..2836243 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: kpn:KPN_01938 transmembrane protein; hypothetical protein 2836243 8086806 Dd703_2418 Dickeya dadantii Ech703 hypothetical protein YP_002988022.1 2835347 D 579405 CDS YP_002988023.1 242239842 8086807 complement(2836322..2837680) 1 NC_012880.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: eca:ECA2805 ATP-dependent RNA helicase RhlE; DEAD/DEAH box helicase 2837680 8086807 Dd703_2419 Dickeya dadantii Ech703 DEAD/DEAH box helicase YP_002988023.1 2836322 R 579405 CDS YP_002988024.1 242239843 8086808 2838232..2839236 1 NC_012880.1 PFAM: secretion protein HlyD; KEGG: ypy:YPK_2900 secretion protein HlyD; hypothetical protein 2839236 8086808 Dd703_2420 Dickeya dadantii Ech703 hypothetical protein YP_002988024.1 2838232 D 579405 CDS YP_002988025.1 242239844 8086809 2839226..2840974 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ypy:YPK_2901 ABC transporter; ABC transporter 2840974 8086809 Dd703_2421 Dickeya dadantii Ech703 ABC transporter YP_002988025.1 2839226 D 579405 CDS YP_002988026.1 242239845 8086810 2840961..2842100 1 NC_012880.1 PFAM: ABC transporter; KEGG: spe:Spro_1327 ABC-2 type transporter; ABC transporter 2842100 8086810 Dd703_2422 Dickeya dadantii Ech703 ABC transporter YP_002988026.1 2840961 D 579405 CDS YP_002988027.1 242239846 8086811 2842112..2843212 1 NC_012880.1 PFAM: ABC transporter; KEGG: spe:Spro_1326 ABC-2 type transporter; ABC transporter 2843212 8086811 Dd703_2423 Dickeya dadantii Ech703 ABC transporter YP_002988027.1 2842112 D 579405 CDS YP_002988028.1 242239847 8086812 2843598..2844359 1 NC_012880.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: kpn:KPN_00818 DNase; endonuclease/exonuclease/phosphatase 2844359 8086812 Dd703_2424 Dickeya dadantii Ech703 endonuclease/exonuclease/phosphatase YP_002988028.1 2843598 D 579405 CDS YP_002988029.1 242239848 8086813 2844356..2845561 1 NC_012880.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: kpe:KPK_3754 cardiolipin synthetase; cardiolipin synthase 2 2845561 8086813 Dd703_2425 Dickeya dadantii Ech703 cardiolipin synthase 2 YP_002988029.1 2844356 D 579405 CDS YP_002988030.1 242239849 8086814 2845854..2846765 1 NC_012880.1 PFAM: Auxin Efflux Carrier; KEGG: pna:Pnap_2164 auxin efflux carrier; auxin efflux carrier family protein 2846765 8086814 Dd703_2426 Dickeya dadantii Ech703 auxin efflux carrier family protein YP_002988030.1 2845854 D 579405 CDS YP_002988031.1 242239850 8086815 complement(2846883..2847593) 1 NC_012880.1 PFAM: protein of unknown function UPF0005; KEGG: spe:Spro_1325 hypothetical protein; hypothetical protein 2847593 8086815 Dd703_2427 Dickeya dadantii Ech703 hypothetical protein YP_002988031.1 2846883 R 579405 CDS YP_002988032.1 242239851 8086816 complement(2847730..2848764) 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: spe:Spro_2536 ABC transporter-related protein; ABC transporter 2848764 8086816 Dd703_2428 Dickeya dadantii Ech703 ABC transporter YP_002988032.1 2847730 R 579405 CDS YP_002988033.1 242239852 8086817 complement(2848761..2850344) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_2535 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2850344 8086817 Dd703_2429 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988033.1 2848761 R 579405 CDS YP_002988034.1 242239853 8086818 complement(2850378..2851394) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2534 extracellular solute-binding protein; family 1 extracellular solute-binding protein 2851394 8086818 Dd703_2430 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002988034.1 2850378 R 579405 CDS YP_002988035.1 242239854 8086819 complement(2851632..2852081) 1 NC_012880.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 2852081 moaE 8086819 moaE Dickeya dadantii Ech703 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_002988035.1 2851632 R 579405 CDS YP_002988036.1 242239855 8086820 complement(2852086..2852331) 1 NC_012880.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: eca:ECA2814 molybdopterin synthase small subunit; molybdopterin converting factor subunit 1 2852331 8086820 Dd703_2432 Dickeya dadantii Ech703 molybdopterin converting factor subunit 1 YP_002988036.1 2852086 R 579405 CDS YP_002988037.1 242239856 8086821 complement(2852328..2852810) 1 NC_012880.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: eca:ECA2815 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 2852810 8086821 Dd703_2433 Dickeya dadantii Ech703 molybdenum cofactor biosynthesis protein C YP_002988037.1 2852328 R 579405 CDS YP_002988038.1 242239857 8086822 complement(2852817..2853329) 1 NC_012880.1 TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis protein; PFAM: molybdopterin binding domain; KEGG: eca:ECA2816 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B 2853329 8086822 Dd703_2434 Dickeya dadantii Ech703 molybdenum cofactor biosynthesis protein B YP_002988038.1 2852817 R 579405 CDS YP_002988039.1 242239858 8086823 complement(2853365..2854387) 1 NC_012880.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2854387 moaA 8086823 moaA Dickeya dadantii Ech703 molybdenum cofactor biosynthesis protein A YP_002988039.1 2853365 R 579405 CDS YP_002988040.1 242239859 8086824 2854883..2855818 1 NC_012880.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: eca:ECA2818 hypothetical protein; hypothetical protein 2855818 8086824 Dd703_2436 Dickeya dadantii Ech703 hypothetical protein YP_002988040.1 2854883 D 579405 CDS YP_002988041.1 242239860 8086825 complement(2855794..2856225) 1 NC_012880.1 KEGG: eca:ECA2819 hypothetical protein; hypothetical protein 2856225 8086825 Dd703_2437 Dickeya dadantii Ech703 hypothetical protein YP_002988041.1 2855794 R 579405 CDS YP_002988042.1 242239861 8086826 complement(2856298..2858310) 1 NC_012880.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2858310 8086826 Dd703_2438 Dickeya dadantii Ech703 excinuclease ABC subunit B YP_002988042.1 2856298 R 579405 CDS YP_002988043.1 242239862 8086827 complement(2859090..2859773) 1 NC_012880.1 KEGG: spe:Spro_1314 dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: cobyrinic acid ac-diamide synthase; dethiobiotin synthase 2859773 8086827 Dd703_2439 Dickeya dadantii Ech703 dethiobiotin synthase YP_002988043.1 2859090 R 579405 CDS YP_002988044.1 242239863 8086828 complement(2859867..2860517) 1 NC_012880.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: eca:ECA2823 biotin synthesis protein; type 11 methyltransferase 2860517 8086828 Dd703_2440 Dickeya dadantii Ech703 type 11 methyltransferase YP_002988044.1 2859867 R 579405 CDS YP_002988045.1 242239864 8086829 complement(2860504..2861652) 1 NC_012880.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 2861652 8086829 Dd703_2441 Dickeya dadantii Ech703 8-amino-7-oxononanoate synthase YP_002988045.1 2860504 R 579405 CDS YP_002988046.1 242239865 8086830 complement(2861653..2862693) 1 NC_012880.1 KEGG: eca:ECA2825 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2862693 8086830 Dd703_2442 Dickeya dadantii Ech703 biotin synthase YP_002988046.1 2861653 R 579405 CDS YP_002988047.1 242239866 8086831 2862780..2864072 1 NC_012880.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2864072 8086831 Dd703_2443 Dickeya dadantii Ech703 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002988047.1 2862780 D 579405 CDS YP_002988048.1 242239867 8086832 2864177..2865541 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2256 transporter; major facilitator superfamily protein 2865541 8086832 Dd703_2444 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988048.1 2864177 D 579405 CDS YP_002988049.1 242239868 8086833 2865538..2866353 1 NC_012880.1 PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2671 AraC family transcriptional regulator; AraC family transcriptional regulator 2866353 8086833 Dd703_2445 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002988049.1 2865538 D 579405 CDS YP_002988050.1 242239869 8086834 2866620..2868599 1 NC_012880.1 PFAM: glycoside hydrolase; KEGG: bam:Bamb_4300 beta-glucosidase; glycoside hydrolase 2868599 8086834 Dd703_2446 Dickeya dadantii Ech703 glycoside hydrolase YP_002988050.1 2866620 D 579405 CDS YP_002988051.1 242239870 8086835 2868866..2869282 1 NC_012880.1 PFAM: LrgA family protein; KEGG: eca:ECA2828 hypothetical protein; hypothetical protein 2869282 8086835 Dd703_2447 Dickeya dadantii Ech703 hypothetical protein YP_002988051.1 2868866 D 579405 CDS YP_002988052.1 242239871 8086836 2869272..2869967 1 NC_012880.1 PFAM: LrgB family protein; KEGG: yen:YE2791 hypothetical protein; hypothetical protein 2869967 8086836 Dd703_2448 Dickeya dadantii Ech703 hypothetical protein YP_002988052.1 2869272 D 579405 CDS YP_002988053.1 242239872 8086837 2870230..2871114 1 NC_012880.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 2871114 8086837 Dd703_2449 Dickeya dadantii Ech703 cytidine deaminase YP_002988053.1 2870230 D 579405 CDS YP_002988054.1 242239873 8086838 complement(2871061..2871282) 1 NC_012880.1 hypothetical protein 2871282 8086838 Dd703_2450 Dickeya dadantii Ech703 hypothetical protein YP_002988054.1 2871061 R 579405 CDS YP_002988055.1 242239874 8086839 2871480..2873177 1 NC_012880.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 2873177 8086839 Dd703_2451 Dickeya dadantii Ech703 malate dehydrogenase YP_002988055.1 2871480 D 579405 CDS YP_002988056.1 242239875 8086840 2873497..2874729 1 NC_012880.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: eca:ECA2836 molybdopterin biosynthesis protein MoeA; molybdenum cofactor synthesis protein 2874729 8086840 Dd703_2452 Dickeya dadantii Ech703 molybdenum cofactor synthesis protein YP_002988056.1 2873497 D 579405 CDS YP_002988057.1 242239876 8086841 2874726..2875487 1 NC_012880.1 TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: spe:Spro_1546 molybdopterin biosynthesis protein MoeB; molybdopterin synthase sulfurylase MoeB 2875487 8086841 Dd703_2453 Dickeya dadantii Ech703 molybdopterin synthase sulfurylase MoeB YP_002988057.1 2874726 D 579405 CDS YP_002988058.1 242239877 8086842 2875550..2875945 1 NC_012880.1 PFAM: thioesterase superfamily protein; KEGG: pmr:PMI1691 thioesterase superfamilyl protein; thioesterase superfamily protein 2875945 8086842 Dd703_2454 Dickeya dadantii Ech703 thioesterase superfamily protein YP_002988058.1 2875550 D 579405 CDS YP_002988059.1 242239878 8086843 2876147..2876746 1 NC_012880.1 PFAM: nitroreductase; KEGG: eca:ECA2838 hypothetical protein; nitroreductase 2876746 8086843 Dd703_2455 Dickeya dadantii Ech703 nitroreductase YP_002988059.1 2876147 D 579405 CDS YP_002988060.1 242239879 8086844 2876911..2877465 1 NC_012880.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: ecz:ECS88_3009 protein with flavodoxin fold; flavodoxin/nitric oxide synthase 2877465 8086844 Dd703_2456 Dickeya dadantii Ech703 flavodoxin/nitric oxide synthase YP_002988060.1 2876911 D 579405 CDS YP_002988061.1 242239880 8086845 complement(2877789..2878136) 1 NC_012880.1 KEGG: ent:Ent638_2231 hypothetical protein; hypothetical protein 2878136 8086845 Dd703_2457 Dickeya dadantii Ech703 hypothetical protein YP_002988061.1 2877789 R 579405 CDS YP_002988062.1 242239881 8086847 2878711..2879508 1 NC_012880.1 PFAM: protein of unknown function DUF980; KEGG: eca:ECA1680 hypothetical protein; hypothetical protein 2879508 8086847 Dd703_2458 Dickeya dadantii Ech703 hypothetical protein YP_002988062.1 2878711 D 579405 CDS YP_002988063.1 242239882 8086849 2879871..2881157 1 NC_012880.1 PFAM: integrase family protein; KEGG: eca:ECA2889 integrase; integrase family protein 2881157 8086849 Dd703_2459 Dickeya dadantii Ech703 integrase family protein YP_002988063.1 2879871 D 579405 CDS YP_002988064.1 242239883 8086850 complement(2881352..2882734) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_5732 EmrB/QacA family drug resistance transporter; major facilitator superfamily protein 2882734 8086850 Dd703_2460 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988064.1 2881352 R 579405 CDS YP_002988065.1 242239884 8086851 2883013..2883669 1 NC_012880.1 KEGG: pat:Patl_3304 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2883669 8086851 Dd703_2461 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002988065.1 2883013 D 579405 CDS YP_002988066.1 242239885 8086852 2884208..2884765 1 NC_012880.1 KEGG: rpi:Rpic_0461 hypothetical protein; hypothetical protein 2884765 8086852 Dd703_2462 Dickeya dadantii Ech703 hypothetical protein YP_002988066.1 2884208 D 579405 CDS YP_002988067.1 242239886 8086853 2884862..2885902 1 NC_012880.1 PFAM: Integrase catalytic region; KEGG: son:SO_A0151 ISSod13, transposase; Integrase catalytic subunit 2885902 8086853 Dd703_2463 Dickeya dadantii Ech703 Integrase catalytic subunit YP_002988067.1 2884862 D 579405 CDS YP_002988068.1 242239887 8086856 complement(2886334..2887275) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmr:PMI1178 AraC-family transcriptional regulator; AraC family transcriptional regulator 2887275 8086856 Dd703_2466 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002988068.1 2886334 R 579405 CDS YP_002988069.1 242239888 8086857 complement(2887363..2888889) 1 NC_012880.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_2659 drug resistance MFS transporter drug:H+ antiporter-1 (DHA2) family; EmrB/QacA subfamily drug resistance transporter 2888889 8086857 Dd703_2467 Dickeya dadantii Ech703 EmrB/QacA subfamily drug resistance transporter YP_002988069.1 2887363 R 579405 CDS YP_002988070.1 242239889 8086858 complement(2888895..2890076) 1 NC_012880.1 PFAM: secretion protein HlyD; KEGG: kpe:KPK_2660 auxiliary transporter, membrane fusion protein (MFP) family; secretion protein HlyD 2890076 8086858 Dd703_2468 Dickeya dadantii Ech703 secretion protein HlyD YP_002988070.1 2888895 R 579405 CDS YP_002988071.1 242239890 8086859 complement(2890194..2890646) 1 NC_012880.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kpe:KPK_2661 MarR family transcriptional regulator; MarR family transcriptional regulator 2890646 8086859 Dd703_2469 Dickeya dadantii Ech703 MarR family transcriptional regulator YP_002988071.1 2890194 R 579405 CDS YP_002988072.1 242239891 8086860 complement(2891003..2891977) 1 NC_012880.1 PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: eca:ECA1568 chemotaxis signal transduction protein; response regulator receiver modulated CheW protein 2891977 8086860 Dd703_2470 Dickeya dadantii Ech703 response regulator receiver modulated CheW protein YP_002988072.1 2891003 R 579405 CDS YP_002988073.1 242239892 8086861 2892774..2893427 1 NC_012880.1 PFAM: hypothetical protein; KEGG: esa:ESA_04136 hypothetical protein; hypothetical protein 2893427 8086861 Dd703_2471 Dickeya dadantii Ech703 hypothetical protein YP_002988073.1 2892774 D 579405 CDS YP_002988074.1 242239893 8086862 complement(2893578..2893943) 1 NC_012880.1 KEGG: oca:OCAR_4559 hypothetical protein; hypothetical protein 2893943 8086862 Dd703_2472 Dickeya dadantii Ech703 hypothetical protein YP_002988074.1 2893578 R 579405 CDS YP_002988075.1 242239894 8086864 2895343..2897001 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0183 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2897001 8086864 Dd703_2474 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002988075.1 2895343 D 579405 CDS YP_002988076.1 242239895 8086865 complement(2897142..2898458) 1 NC_012880.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM3698 permease; d-galactonate transporter 2898458 8086865 Dd703_2475 Dickeya dadantii Ech703 d-galactonate transporter YP_002988076.1 2897142 R 579405 CDS YP_002988077.1 242239896 8086866 complement(2898559..2899755) 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: stm:STM3697 mandelate racemase; mandelate racemase/muconate lactonizing protein 2899755 8086866 Dd703_2476 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002988077.1 2898559 R 579405 CDS YP_002988078.1 242239897 8086867 2900082..2901104 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: eca:ECA0997 LacI family transcriptional regulator; LacI family transcriptional regulator 2901104 8086867 Dd703_2477 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002988078.1 2900082 D 579405 CDS YP_002988079.1 242239898 8086868 complement(2901242..2901424) 1 NC_012880.1 hypothetical protein 2901424 8086868 Dd703_2478 Dickeya dadantii Ech703 hypothetical protein YP_002988079.1 2901242 R 579405 CDS YP_002988080.1 242239899 8086869 2901513..2901848 1 NC_012880.1 KEGG: eca:ECA3371 hypothetical protein; hypothetical protein 2901848 8086869 Dd703_2479 Dickeya dadantii Ech703 hypothetical protein YP_002988080.1 2901513 D 579405 CDS YP_002988081.1 242239900 8086870 2902356..2903606 1 NC_012880.1 PFAM: glycosyl transferase family 28; KEGG: bte:BTH_II1880 rhamnosyltransferase I, subunit B; glycosyl transferase family protein 2903606 8086870 Dd703_2480 Dickeya dadantii Ech703 glycosyl transferase family protein YP_002988081.1 2902356 D 579405 CDS YP_002988082.1 242239901 8086871 2903924..2905687 1 NC_012880.1 KEGG: eca:ECA4379 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2905687 8086871 Dd703_2481 Dickeya dadantii Ech703 gamma-glutamyltransferase YP_002988082.1 2903924 D 579405 CDS YP_002988083.1 242239902 8086872 2905867..2906502 1 NC_012880.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: eca:ECA1497 two-component system response regulator protein; LuxR family transcriptional regulator 2906502 8086872 Dd703_2482 Dickeya dadantii Ech703 LuxR family transcriptional regulator YP_002988083.1 2905867 D 579405 CDS YP_002988084.1 242239903 8086873 2906506..2908050 1 NC_012880.1 KEGG: eca:ECA1496 two-component system sensor histidine kinase; PFAM: MASE1 domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; histidine kinase 2908050 8086873 Dd703_2483 Dickeya dadantii Ech703 histidine kinase YP_002988084.1 2906506 D 579405 CDS YP_002988085.1 242239904 8086874 2908151..2909464 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1495 regulatory protein; major facilitator superfamily protein 2909464 8086874 Dd703_2484 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988085.1 2908151 D 579405 CDS YP_002988086.1 242239905 8086875 2909572..2910603 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE2659 extracellular solute-binding protein; family 1 extracellular solute-binding protein 2910603 8086875 Dd703_2485 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002988086.1 2909572 D 579405 CDS YP_002988087.1 242239906 8086876 2910849..2912927 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1493 ferric ABC transporter permease; binding-protein-dependent transporters inner membrane component 2912927 8086876 Dd703_2486 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988087.1 2910849 D 579405 CDS YP_002988088.1 242239907 8086877 2912943..2914004 1 NC_012880.1 Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import; ferric transporter ATP-binding subunit 2914004 fbpC 8086877 fbpC Dickeya dadantii Ech703 ferric transporter ATP-binding subunit YP_002988088.1 2912943 D 579405 CDS YP_002988089.1 242239908 8086878 complement(2914100..2915638) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: bph:Bphy_5545 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 2915638 8086878 Dd703_2488 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_002988089.1 2914100 R 579405 CDS YP_002988090.1 242239909 8086879 complement(2915862..2916743) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1967 LysR family transcriptional regulator; LysR family transcriptional regulator 2916743 8086879 Dd703_2489 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988090.1 2915862 R 579405 CDS YP_002988091.1 242239910 8086880 2916875..2918050 1 NC_012880.1 catalyzes the transfer of an amino moiety; aminotransferase 2918050 8086880 Dd703_2490 Dickeya dadantii Ech703 aminotransferase YP_002988091.1 2916875 D 579405 CDS YP_002988092.1 242239911 8086881 2918191..2918967 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ent:Ent638_1970 extracellular solute-binding protein; family 3 extracellular solute-binding protein 2918967 8086881 Dd703_2491 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002988092.1 2918191 D 579405 CDS YP_002988093.1 242239912 8086882 complement(2919181..2919999) 1 NC_012880.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA2989 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2919999 8086882 Dd703_2492 Dickeya dadantii Ech703 uroporphyrin-III C-methyltransferase YP_002988093.1 2919181 R 579405 CDS YP_002988094.1 242239913 8086883 complement(2920023..2922665) 1 NC_012880.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: eca:ECA2990 nitrate reductase; molybdopterin oxidoreductase 2922665 8086883 Dd703_2493 Dickeya dadantii Ech703 molybdopterin oxidoreductase YP_002988094.1 2920023 R 579405 CDS YP_002988095.1 242239914 8086884 complement(2922662..2926783) 1 NC_012880.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: eca:ECA2991 nitrite reductase [NAD(P)H] large subunit; nitrite reductase (NAD(P)H) large subunit 2926783 8086884 Dd703_2494 Dickeya dadantii Ech703 nitrite reductase (NAD(P)H) large subunit YP_002988095.1 2922662 R 579405 CDS YP_002988096.1 242239915 8086885 complement(2926798..2927592) 1 NC_012880.1 KEGG: eca:ECA2992 nitrate transporter; TIGRFAM: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter related; SMART: ATPase AAA; nitrate ABC transporter ATPases C and D 2927592 8086885 Dd703_2495 Dickeya dadantii Ech703 nitrate ABC transporter ATPases C and D YP_002988096.1 2926798 R 579405 CDS YP_002988097.1 242239916 8086886 complement(2927603..2928517) 1 NC_012880.1 TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2993 nitrate transporter permease; nitrate ABC transporter permease 2928517 8086886 Dd703_2496 Dickeya dadantii Ech703 nitrate ABC transporter permease YP_002988097.1 2927603 R 579405 CDS YP_002988098.1 242239917 8086887 complement(2928530..2929786) 1 NC_012880.1 KEGG: eca:ECA2994 nitrate-binding proteint; nitrate-binding protein 2929786 8086887 Dd703_2497 Dickeya dadantii Ech703 nitrate-binding protein YP_002988098.1 2928530 R 579405 CDS YP_002988099.1 242239918 8086889 complement(2930543..2931781) 1 NC_012880.1 TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_2803 formyl-coenzyme A transferase; formyl-CoA transferase 2931781 8086889 Dd703_2499 Dickeya dadantii Ech703 formyl-CoA transferase YP_002988099.1 2930543 R 579405 CDS YP_002988100.1 242239919 8086890 complement(2931908..2932339) 1 NC_012880.1 KEGG: mch:Mchl_1366 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 2932339 8086890 Dd703_2500 Dickeya dadantii Ech703 PAS/PAC sensor protein YP_002988100.1 2931908 R 579405 CDS YP_002988101.1 242239920 8086891 complement(2932345..2933622) 1 NC_012880.1 TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_2801 formyl-coenzyme A transferase; formyl-CoA transferase 2933622 8086891 Dd703_2501 Dickeya dadantii Ech703 formyl-CoA transferase YP_002988101.1 2932345 R 579405 CDS YP_002988102.1 242239921 8086892 complement(2933661..2935406) 1 NC_012880.1 catalyzes the formation of formyl-CoA from oxalyl-CoA; oxalyl-CoA decarboxylase 2935406 8086892 Dd703_2502 Dickeya dadantii Ech703 oxalyl-CoA decarboxylase YP_002988102.1 2933661 R 579405 CDS YP_002988103.1 242239922 8086893 complement(2935461..2936771) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: cti:RALTA_B1242 transporter; major facilitator superfamily MFS_1; major facilitator superfamily protein 2936771 8086893 Dd703_2503 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988103.1 2935461 R 579405 CDS YP_002988104.1 242239923 8086894 2937414..2938310 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sew:SeSA_A2659 OsmT protein; LysR family transcriptional regulator 2938310 8086894 Dd703_2504 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988104.1 2937414 D 579405 CDS YP_002988105.1 242239924 8086896 2939216..2940700 1 NC_012880.1 KEGG: pfl:PFL_2675 lipoprotein; lipoprotein 2940700 8086896 Dd703_2506 Dickeya dadantii Ech703 lipoprotein YP_002988105.1 2939216 D 579405 CDS YP_002988106.1 242239925 8086897 2940952..2941467 1 NC_012880.1 PFAM: protein of unknown function UPF0157; KEGG: kpn:KPN_01720 hypothetical protein; hypothetical protein 2941467 8086897 Dd703_2507 Dickeya dadantii Ech703 hypothetical protein YP_002988106.1 2940952 D 579405 CDS YP_002988107.1 242239926 8086898 complement(2941595..2942878) 1 NC_012880.1 PFAM: nitrate and nitrite sensing domain protein; ANTAR domain protein; KEGG: eca:ECA2995 nitrate-and nitrite-responsive positive regulator; ANTAR domain-containing protein 2942878 8086898 Dd703_2508 Dickeya dadantii Ech703 ANTAR domain-containing protein YP_002988107.1 2941595 R 579405 CDS YP_002988108.1 242239927 8086899 2943328..2945001 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA2712 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2945001 8086899 Dd703_2509 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002988108.1 2943328 D 579405 CDS YP_002988109.1 242239928 8086900 complement(2945149..2946546) 1 NC_012880.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: spe:Spro_2477 RND efflux system outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 2946546 8086900 Dd703_2510 Dickeya dadantii Ech703 NodT family RND efflux system outer membrane lipoprotein YP_002988109.1 2945149 R 579405 CDS YP_002988110.1 242239929 8086901 complement(2946546..2949704) 1 NC_012880.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: yen:YE0444 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2949704 8086901 Dd703_2511 Dickeya dadantii Ech703 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_002988110.1 2946546 R 579405 CDS YP_002988111.1 242239930 8086902 complement(2949707..2950858) 1 NC_012880.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: yen:YE0443 multidrug efflux protein; RND family efflux transporter MFP subunit 2950858 8086902 Dd703_2512 Dickeya dadantii Ech703 RND family efflux transporter MFP subunit YP_002988111.1 2949707 R 579405 CDS YP_002988112.1 242239931 8086903 2950981..2951580 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_1191 TetR family transcriptional regulator; TetR family transcriptional regulator 2951580 8086903 Dd703_2513 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002988112.1 2950981 D 579405 CDS YP_002988113.1 242239932 8086904 2951573..2952766 1 NC_012880.1 TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1190 Bcr/CflA subfamily drug resistance transporter; Bcr/CflA subfamily drug resistance transporter 2952766 8086904 Dd703_2514 Dickeya dadantii Ech703 Bcr/CflA subfamily drug resistance transporter YP_002988113.1 2951573 D 579405 CDS YP_002988114.1 242239933 8086905 complement(2952818..2953747) 1 NC_012880.1 required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 2953747 8086905 Dd703_2515 Dickeya dadantii Ech703 formate dehydrogenase accessory protein FdhE YP_002988114.1 2952818 R 579405 CDS YP_002988115.1 242239934 8086906 2954077..2954169 1 NC_012880.1 hypothetical protein 2954169 8086906 Dd703_2516 Dickeya dadantii Ech703 hypothetical protein YP_002988115.1 2954077 D 579405 CDS YP_002988116.1 242239935 8086907 complement(2954320..2954955) 1 NC_012880.1 cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma 2954955 8086907 Dd703_2517 Dickeya dadantii Ech703 formate dehydrogenase-O subunit gamma YP_002988116.1 2954320 R 579405 CDS YP_002988117.1 242239936 8086908 complement(2954942..2955844) 1 NC_012880.1 TIGRFAM: formate dehydrogenase subunit beta; PFAM: formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spe:Spro_0085 formate dehydrogenase, subunit beta; formate dehydrogenase subunit beta 2955844 8086908 Dd703_2518 Dickeya dadantii Ech703 formate dehydrogenase subunit beta YP_002988117.1 2954942 R 579405 CDS YP_002988118.1 242239937 8086909 complement(2955857..2958907) 1 NC_012880.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: eca:ECA1408 formate dehydrogenase, nitrate-inducible, major subunit; formate dehydrogenase subunit alpha 2958907 8086909 Dd703_2519 Dickeya dadantii Ech703 formate dehydrogenase subunit alpha YP_002988118.1 2955857 R 579405 CDS YP_002988119.1 242239938 8086910 complement(2959587..2961008) 1 NC_012880.1 PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA3004 transcription regulator GntR; GntR family transcriptional regulator 2961008 8086910 Dd703_2520 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002988119.1 2959587 R 579405 CDS YP_002988120.1 242239939 8086911 complement(2961001..2961741) 1 NC_012880.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 2961741 8086911 Dd703_2521 Dickeya dadantii Ech703 glutamine amidotransferase YP_002988120.1 2961001 R 579405 CDS YP_002988121.1 242239940 8086912 complement(2961801..2962280) 1 NC_012880.1 KEGG: eca:ECA3006 hypothetical protein; hypothetical protein 2962280 8086912 Dd703_2522 Dickeya dadantii Ech703 hypothetical protein YP_002988121.1 2961801 R 579405 CDS YP_002988122.1 242239941 8086913 complement(2962380..2964689) 1 NC_012880.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: yen:YE3600 hydrogenase maturation protein; (NiFe) hydrogenase maturation protein HypF 2964689 8086913 Dd703_2523 Dickeya dadantii Ech703 (NiFe) hydrogenase maturation protein HypF YP_002988122.1 2962380 R 579405 CDS YP_002988123.1 242239942 8086914 complement(2965022..2966050) 1 NC_012880.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: pmr:PMI0040 hydrogenase formation protein; hydrogenase expression/formation protein HypE 2966050 8086914 Dd703_2524 Dickeya dadantii Ech703 hydrogenase expression/formation protein HypE YP_002988123.1 2965022 R 579405 CDS YP_002988124.1 242239943 8086915 complement(2966050..2967165) 1 NC_012880.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: pmr:PMI0039 hydrogenase formation protein; hydrogenase expression/formation protein HypD 2967165 8086915 Dd703_2525 Dickeya dadantii Ech703 hydrogenase expression/formation protein HypD YP_002988124.1 2966050 R 579405 CDS YP_002988125.1 242239944 8086916 complement(2967149..2967439) 1 NC_012880.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: yen:YE3602A hydrogenase 2 accessory protein HypG; hydrogenase assembly chaperone HypC/HupF 2967439 8086916 Dd703_2526 Dickeya dadantii Ech703 hydrogenase assembly chaperone HypC/HupF YP_002988125.1 2967149 R 579405 CDS YP_002988126.1 242239945 8086917 complement(2967430..2968653) 1 NC_012880.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: pmr:PMI0037 hydrogenase nickel incorporation protein; hydrogenase nickel incorporation protein HypB 2968653 8086917 Dd703_2527 Dickeya dadantii Ech703 hydrogenase nickel incorporation protein HypB YP_002988126.1 2967430 R 579405 CDS YP_002988127.1 242239946 8086918 complement(2968713..2969054) 1 NC_012880.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: yen:YE3603a hydrogenase nickel incorporation protein HybF; hydrogenase nickel incorporation protein HypA 2969054 8086918 Dd703_2528 Dickeya dadantii Ech703 hydrogenase nickel incorporation protein HypA YP_002988127.1 2968713 R 579405 CDS YP_002988128.1 242239947 8086919 complement(2969056..2969616) 1 NC_012880.1 KEGG: yen:YE3604 hydrogenase 2-specific chaperone; hydrogenase 2-specific chaperone 2969616 8086919 Dd703_2529 Dickeya dadantii Ech703 hydrogenase 2-specific chaperone YP_002988128.1 2969056 R 579405 CDS YP_002988129.1 242239948 8086920 complement(2969609..2970118) 1 NC_012880.1 TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: yen:YE3605 hydrogenase 2 maturation endopeptidase; hydrogenase expression/formation protein 2970118 8086920 Dd703_2530 Dickeya dadantii Ech703 hydrogenase expression/formation protein YP_002988129.1 2969609 R 579405 CDS YP_002988130.1 242239949 8086921 complement(2970118..2971824) 1 NC_012880.1 involved in hydrogen uptake; hydrogenase 2 large subunit 2971824 8086921 Dd703_2531 Dickeya dadantii Ech703 hydrogenase 2 large subunit YP_002988130.1 2970118 R 579405 CDS YP_002988131.1 242239950 8086922 complement(2971802..2973001) 1 NC_012880.1 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; hydrogenase 2 b cytochrome subunit 2973001 8086922 Dd703_2532 Dickeya dadantii Ech703 hydrogenase 2 b cytochrome subunit YP_002988131.1 2971802 R 579405 CDS YP_002988132.1 242239951 8086923 complement(2972988..2974004) 1 NC_012880.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA 2974004 8086923 Dd703_2533 Dickeya dadantii Ech703 hydrogenase 2 protein HybA YP_002988132.1 2972988 R 579405 CDS YP_002988133.1 242239952 8086924 complement(2974008..2975135) 1 NC_012880.1 involved in hydrogen uptake; hydrogenase 2 small subunit 2975135 8086924 Dd703_2534 Dickeya dadantii Ech703 hydrogenase 2 small subunit YP_002988133.1 2974008 R 579405 CDS YP_002988134.1 242239953 8086925 complement(2975922..2977514) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3010 ABC transporter ATP-binding protein; ABC transporter 2977514 8086925 Dd703_2535 Dickeya dadantii Ech703 ABC transporter YP_002988134.1 2975922 R 579405 CDS YP_002988135.1 242239954 8086926 2977670..2978551 1 NC_012880.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: eca:ECA3011 hypothetical protein; phenazine biosynthesis protein PhzF family 2978551 8086926 Dd703_2536 Dickeya dadantii Ech703 phenazine biosynthesis protein PhzF family YP_002988135.1 2977670 D 579405 CDS YP_002988136.1 242239955 8086927 2978736..2978834 1 NC_012880.1 hypothetical protein 2978834 8086927 Dd703_2537 Dickeya dadantii Ech703 hypothetical protein YP_002988136.1 2978736 D 579405 CDS YP_002988137.1 242239956 8086928 complement(2979248..2980705) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 2980705 8086928 Dd703_2538 Dickeya dadantii Ech703 NADH dehydrogenase subunit N YP_002988137.1 2979248 R 579405 CDS YP_002988138.1 242239957 8086929 complement(2980712..2982247) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 2982247 8086929 Dd703_2539 Dickeya dadantii Ech703 NADH dehydrogenase subunit M YP_002988138.1 2980712 R 579405 CDS YP_002988139.1 242239958 8086930 complement(2982345..2984195) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 2984195 8086930 Dd703_2540 Dickeya dadantii Ech703 NADH dehydrogenase subunit L YP_002988139.1 2982345 R 579405 CDS YP_002988140.1 242239959 8086931 complement(2984192..2984494) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 2984494 8086931 Dd703_2541 Dickeya dadantii Ech703 NADH dehydrogenase subunit K YP_002988140.1 2984192 R 579405 CDS YP_002988141.1 242239960 8086932 complement(2984491..2985036) 1 NC_012880.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: eta:ETA_12120 NADH dehydrogenase I chain J; NADH dehydrogenase (quinone) 2985036 8086932 Dd703_2542 Dickeya dadantii Ech703 NADH dehydrogenase (quinone) YP_002988141.1 2984491 R 579405 CDS YP_002988142.1 242239961 8086933 complement(2985047..2985589) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2985589 8086933 Dd703_2543 Dickeya dadantii Ech703 NADH dehydrogenase subunit I YP_002988142.1 2985047 R 579405 CDS YP_002988143.1 242239962 8086934 complement(2985606..2986580) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 2986580 8086934 Dd703_2544 Dickeya dadantii Ech703 NADH dehydrogenase subunit H YP_002988143.1 2985606 R 579405 CDS YP_002988144.1 242239963 8086935 complement(2986577..2989303) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 2989303 8086935 Dd703_2545 Dickeya dadantii Ech703 NADH dehydrogenase subunit G YP_002988144.1 2986577 R 579405 CDS YP_002988145.1 242239964 8086936 complement(2989400..2990749) 1 NC_012880.1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 2990749 8086936 Dd703_2546 Dickeya dadantii Ech703 NADH dehydrogenase I subunit F YP_002988145.1 2989400 R 579405 CDS YP_002988146.1 242239965 8086937 complement(2990746..2991276) 1 NC_012880.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: eca:ECA3025 NADH dehydrogenase subunit E; NADH-quinone oxidoreductase subunit E 2991276 8086937 Dd703_2547 Dickeya dadantii Ech703 NADH-quinone oxidoreductase subunit E YP_002988146.1 2990746 R 579405 CDS YP_002988147.1 242239966 8086938 complement(2991279..2993078) 1 NC_012880.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2993078 8086938 Dd703_2548 Dickeya dadantii Ech703 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_002988147.1 2991279 R 579405 CDS YP_002988148.1 242239967 8086939 complement(2993180..2993854) 1 NC_012880.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2993854 8086939 Dd703_2549 Dickeya dadantii Ech703 NADH dehydrogenase subunit B YP_002988148.1 2993180 R 579405 CDS YP_002988149.1 242239968 8086940 complement(2993872..2994315) 1 NC_012880.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 2994315 8086940 Dd703_2550 Dickeya dadantii Ech703 NADH dehydrogenase subunit A YP_002988149.1 2993872 R 579405 CDS YP_002988150.1 242239969 8086941 complement(2994984..2995919) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3032 LysR family transcriptional regulator; LysR family transcriptional regulator 2995919 8086941 Dd703_2551 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988150.1 2994984 R 579405 CDS YP_002988151.1 242239970 8086942 complement(2996207..2996371) 1 NC_012880.1 hypothetical protein 2996371 8086942 Dd703_2552 Dickeya dadantii Ech703 hypothetical protein YP_002988151.1 2996207 R 579405 CDS YP_002988152.1 242239971 8086943 2997244..2998458 1 NC_012880.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2998458 8086943 Dd703_2553 Dickeya dadantii Ech703 aminotransferase AlaT YP_002988152.1 2997244 D 579405 CDS YP_002988153.1 242239972 8086944 2998591..2999190 1 NC_012880.1 KEGG: eca:ECA3034 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; hypothetical protein 2999190 8086944 Dd703_2554 Dickeya dadantii Ech703 hypothetical protein YP_002988153.1 2998591 D 579405 CDS YP_002988154.1 242239973 8086945 complement(2999206..3001041) 1 NC_012880.1 PFAM: citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: eca:ECA3035 sodium/sulfate transporter; citrate transporter 3001041 8086945 Dd703_2555 Dickeya dadantii Ech703 citrate transporter YP_002988154.1 2999206 R 579405 CDS YP_002988155.1 242239974 8086946 complement(3001138..3001794) 1 NC_012880.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA3036 phosphatase; phosphatase 3001794 8086946 Dd703_2556 Dickeya dadantii Ech703 phosphatase YP_002988155.1 3001138 R 579405 CDS YP_002988156.1 242239975 8086947 complement(3001815..3002309) 1 NC_012880.1 PFAM: YfbU family protein; KEGG: eca:ECA3037 hypothetical protein; hypothetical protein 3002309 8086947 Dd703_2557 Dickeya dadantii Ech703 hypothetical protein YP_002988156.1 3001815 R 579405 CDS YP_002988157.1 242239976 8086948 complement(3002446..3002901) 1 NC_012880.1 PFAM: protein of unknown function DUF412; KEGG: spe:Spro_3315 hypothetical protein; hypothetical protein 3002901 8086948 Dd703_2558 Dickeya dadantii Ech703 hypothetical protein YP_002988157.1 3002446 R 579405 CDS YP_002988158.1 242239977 8086949 3003306..3004508 1 NC_012880.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3004508 8086949 Dd703_2559 Dickeya dadantii Ech703 acetate kinase YP_002988158.1 3003306 D 579405 CDS YP_002988159.1 242239978 8086950 3004583..3006724 1 NC_012880.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 3006724 8086950 Dd703_2560 Dickeya dadantii Ech703 phosphate acetyltransferase YP_002988159.1 3004583 D 579405 CDS YP_002988160.1 242239979 8086951 complement(3006792..3007397) 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA3042 NUDIX hydrolase; NUDIX hydrolase 3007397 8086951 Dd703_2561 Dickeya dadantii Ech703 NUDIX hydrolase YP_002988160.1 3006792 R 579405 CDS YP_002988161.1 242239980 8086952 complement(3007475..3008026) 1 NC_012880.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: eca:ECA3043 phosphodiesterase; phosphodiesterase 3008026 8086952 Dd703_2562 Dickeya dadantii Ech703 phosphodiesterase YP_002988161.1 3007475 R 579405 CDS YP_002988162.1 242239981 8086953 3008242..3008871 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: eca:ECA3044 glutathione-S transferase; glutathione S-transferase domain-containing protein 3008871 8086953 Dd703_2563 Dickeya dadantii Ech703 glutathione S-transferase domain-containing protein YP_002988162.1 3008242 D 579405 CDS YP_002988163.1 242239982 8086954 3009159..3010064 1 NC_012880.1 PFAM: hypothetical protein; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA3046 hypothetical protein; hypothetical protein 3010064 8086954 Dd703_2564 Dickeya dadantii Ech703 hypothetical protein YP_002988163.1 3009159 D 579405 CDS YP_002988164.1 242239983 8086955 complement(3010148..3010921) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3047 histidine/lysine/arginine/ornithine transporter subunit; histidine/lysine/arginine/ornithine transporter subunit 3010921 8086955 Dd703_2565 Dickeya dadantii Ech703 histidine/lysine/arginine/ornithine transporter subunit YP_002988164.1 3010148 R 579405 CDS YP_002988165.1 242239984 8086956 complement(3010937..3011653) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3048 histidine ABC transporter permease; polar amino acid ABC transporter permease 3011653 8086956 Dd703_2566 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002988165.1 3010937 R 579405 CDS YP_002988166.1 242239985 8086957 complement(3011646..3012335) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3049 histidine ABC transporter permease; polar amino acid ABC transporter permease 3012335 8086957 Dd703_2567 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002988166.1 3011646 R 579405 CDS YP_002988167.1 242239986 8086958 complement(3012404..3013183) 1 NC_012880.1 KEGG: eca:ECA3050 histidine-binding periplasmic protein; TIGRFAM: cationic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic protein 3013183 8086958 Dd703_2568 Dickeya dadantii Ech703 cationic amino acid ABC transporter periplasmic protein YP_002988167.1 3012404 R 579405 CDS YP_002988168.1 242239987 8086959 complement(3013547..3014125) 1 NC_012880.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: yen:YE1317 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3014125 8086959 Dd703_2569 Dickeya dadantii Ech703 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002988168.1 3013547 R 579405 CDS YP_002988169.1 242239988 8086960 complement(3014269..3015786) 1 NC_012880.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3015786 8086960 Dd703_2570 Dickeya dadantii Ech703 amidophosphoribosyltransferase YP_002988169.1 3014269 R 579405 CDS YP_002988170.1 242239989 8086961 complement(3015817..3016308) 1 NC_012880.1 membrane protein required for colicin V production; colicin V production protein 3016308 8086961 Dd703_2571 Dickeya dadantii Ech703 colicin V production protein YP_002988170.1 3015817 R 579405 CDS YP_002988171.1 242239990 8086962 complement(3016626..3017453) 1 NC_012880.1 PFAM: sporulation domain protein; KEGG: eca:ECA3054 hypothetical protein; sporulation domain-containing protein 3017453 8086962 Dd703_2572 Dickeya dadantii Ech703 sporulation domain-containing protein YP_002988171.1 3016626 R 579405 CDS YP_002988172.1 242239991 8086963 complement(3017443..3018711) 1 NC_012880.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: eca:ECA3055 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 3018711 8086963 Dd703_2573 Dickeya dadantii Ech703 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_002988172.1 3017443 R 579405 CDS YP_002988173.1 242239992 8086964 complement(3018786..3019691) 1 NC_012880.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 3019691 8086964 Dd703_2574 Dickeya dadantii Ech703 acetyl-CoA carboxylase subunit beta YP_002988173.1 3018786 R 579405 CDS YP_002988174.1 242239993 8086965 complement(3019962..3020660) 1 NC_012880.1 PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_3333 hypothetical protein; hypothetical protein 3020660 8086965 Dd703_2575 Dickeya dadantii Ech703 hypothetical protein YP_002988174.1 3019962 R 579405 CDS YP_002988175.1 242239994 8086966 complement(3020690..3021517) 1 NC_012880.1 KEGG: eca:ECA3058 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A 3021517 8086966 Dd703_2576 Dickeya dadantii Ech703 tRNA pseudouridine synthase A YP_002988175.1 3020690 R 579405 CDS YP_002988176.1 242239995 8086967 complement(3021517..3022527) 1 NC_012880.1 PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding; KEGG: eca:ECA3059 semialdehyde dehydrogenase; semialdehyde dehydrogenase 3022527 8086967 Dd703_2577 Dickeya dadantii Ech703 semialdehyde dehydrogenase YP_002988176.1 3021517 R 579405 CDS YP_002988177.1 242239996 8086968 complement(3022608..3023744) 1 NC_012880.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: esa:ESA_00896 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region 3023744 8086968 Dd703_2578 Dickeya dadantii Ech703 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_002988177.1 3022608 R 579405 CDS YP_002988178.1 242239997 8086969 complement(3023874..3025274) 1 NC_012880.1 PFAM: Two-component sensor kinase domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_3339 integral membrane sensor signal transduction histidine kinase; histidine kinase 3025274 8086969 Dd703_2579 Dickeya dadantii Ech703 histidine kinase YP_002988178.1 3023874 R 579405 CDS YP_002988179.1 242239998 8086970 complement(3025261..3025956) 1 NC_012880.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: plu:plu3179 two-component response regulator; winged helix family two component transcriptional regulator 3025956 8086970 Dd703_2580 Dickeya dadantii Ech703 winged helix family two component transcriptional regulator YP_002988179.1 3025261 R 579405 CDS YP_002988180.1 242239999 8086971 3026141..3027112 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: ses:SARI_00189 hypothetical protein; hypothetical protein 3027112 8086971 Dd703_2581 Dickeya dadantii Ech703 hypothetical protein YP_002988180.1 3026141 D 579405 CDS YP_002988181.1 242240000 8086972 3027123..3027551 1 NC_012880.1 KEGG: ses:SARI_00188 hypothetical protein; hypothetical protein 3027551 8086972 Dd703_2582 Dickeya dadantii Ech703 hypothetical protein YP_002988181.1 3027123 D 579405 CDS YP_002988182.1 242240001 8086973 3027567..3029060 1 NC_012880.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: spe:Spro_3344 hypothetical protein; hypothetical protein 3029060 8086973 Dd703_2583 Dickeya dadantii Ech703 hypothetical protein YP_002988182.1 3027567 D 579405 CDS YP_002988183.1 242240002 8086974 3029244..3030485 1 NC_012880.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator 3030485 flk 8086974 flk Dickeya dadantii Ech703 flagella biosynthesis regulator YP_002988183.1 3029244 D 579405 CDS YP_002988184.1 242240003 8086975 complement(3030590..3031807) 1 NC_012880.1 PFAM: beta-ketoacyl synthase; KEGG: eca:ECA3063 3-oxoacyl-(acyl carrier protein) synthase I; beta-ketoacyl synthase 3031807 8086975 Dd703_2585 Dickeya dadantii Ech703 beta-ketoacyl synthase YP_002988184.1 3030590 R 579405 CDS YP_002988185.1 242240004 8086976 3031963..3033990 1 NC_012880.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 3033990 mnmC 8086976 mnmC Dickeya dadantii Ech703 5-methylaminomethyl-2-thiouridine methyltransferase YP_002988185.1 3031963 D 579405 CDS YP_002988186.1 242240005 8086977 3034690..3036342 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA3245 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3036342 8086977 Dd703_2587 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002988186.1 3034690 D 579405 CDS YP_002988187.1 242240006 8086978 3036435..3036758 1 NC_012880.1 KEGG: eca:ECA3244 hypothetical protein; hypothetical protein 3036758 8086978 Dd703_2588 Dickeya dadantii Ech703 hypothetical protein YP_002988187.1 3036435 D 579405 CDS YP_002988188.1 242240007 8086979 complement(3036820..3037095) 1 NC_012880.1 PFAM: YfcL protein; KEGG: kpe:KPK_1424 hypothetical protein; hypothetical protein 3037095 8086979 Dd703_2589 Dickeya dadantii Ech703 hypothetical protein YP_002988188.1 3036820 R 579405 CDS YP_002988189.1 242240008 8086980 complement(3037127..3037675) 1 NC_012880.1 PFAM: protein of unknown function DUF462; KEGG: spe:Spro_3371 hypothetical protein; hypothetical protein 3037675 8086980 Dd703_2590 Dickeya dadantii Ech703 hypothetical protein YP_002988189.1 3037127 R 579405 CDS YP_002988190.1 242240009 8086981 complement(3037690..3038493) 1 NC_012880.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA3067 hypothetical protein; hypothetical protein 3038493 8086981 Dd703_2591 Dickeya dadantii Ech703 hypothetical protein YP_002988190.1 3037690 R 579405 CDS YP_002988191.1 242240010 8086982 complement(3038497..3039327) 1 NC_012880.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 3039327 mepA 8086982 mepA Dickeya dadantii Ech703 penicillin-insensitive murein endopeptidase YP_002988191.1 3038497 R 579405 CDS YP_002988192.1 242240011 8086983 complement(3039335..3040420) 1 NC_012880.1 KEGG: eca:ECA3069 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase; chorismate synthase 3040420 8086983 Dd703_2593 Dickeya dadantii Ech703 chorismate synthase YP_002988192.1 3039335 R 579405 CDS YP_002988193.1 242240012 8086984 complement(3040486..3041418) 1 NC_012880.1 KEGG: eca:ECA3070 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; HemK family modification methylase 3041418 8086984 Dd703_2594 Dickeya dadantii Ech703 HemK family modification methylase YP_002988193.1 3040486 R 579405 CDS YP_002988194.1 242240013 8086985 3041654..3042196 1 NC_012880.1 PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: eca:ECA3071 hypothetical protein; hypothetical protein 3042196 8086985 Dd703_2595 Dickeya dadantii Ech703 hypothetical protein YP_002988194.1 3041654 D 579405 CDS YP_002988195.1 242240014 8086986 complement(3042244..3042732) 1 NC_012880.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: phosphoglycerate mutase; KEGG: eca:ECA3072 phosphohistidine phosphatase; phosphohistidine phosphatase, SixA 3042732 8086986 Dd703_2596 Dickeya dadantii Ech703 phosphohistidine phosphatase, SixA YP_002988195.1 3042244 R 579405 CDS YP_002988196.1 242240015 8086987 complement(3043625..3045769) 1 NC_012880.1 TIGRFAM: fatty acid oxidation complex, subunit alpha FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: eca:ECA3078 multifunctional fatty acid oxidation complex subunit alpha; fatty acid oxidation complex subunit alpha FadJ 3045769 8086987 Dd703_2597 Dickeya dadantii Ech703 fatty acid oxidation complex subunit alpha FadJ YP_002988196.1 3043625 R 579405 CDS YP_002988197.1 242240016 8086988 complement(3045766..3047079) 1 NC_012880.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 3047079 fadI 8086988 fadI Dickeya dadantii Ech703 3-ketoacyl-CoA thiolase YP_002988197.1 3045766 R 579405 CDS YP_002988198.1 242240017 8086989 complement(3047339..3047635) 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA3080 hypothetical protein; hypothetical protein 3047635 8086989 Dd703_2599 Dickeya dadantii Ech703 hypothetical protein YP_002988198.1 3047339 R 579405 CDS YP_002988199.1 242240018 8086990 3048028..3049296 1 NC_012880.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: eca:ECA3081 long-chain fatty acid outer membrane transporter; long-chain fatty acid outer membrane transporter 3049296 8086990 Dd703_2600 Dickeya dadantii Ech703 long-chain fatty acid outer membrane transporter YP_002988199.1 3048028 D 579405 CDS YP_002988200.1 242240019 8086991 complement(3049425..3051047) 1 NC_012880.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 3051047 8086991 Dd703_2601 Dickeya dadantii Ech703 malate:quinone oxidoreductase YP_002988200.1 3049425 R 579405 CDS YP_002988201.1 242240020 8086992 complement(3051450..3052211) 1 NC_012880.1 PFAM: VacJ family lipoprotein; KEGG: eca:ECA3083 lipoprotein; VacJ family lipoprotein 3052211 8086992 Dd703_2602 Dickeya dadantii Ech703 VacJ family lipoprotein YP_002988201.1 3051450 R 579405 CDS YP_002988202.1 242240021 8086994 complement(3052817..3053536) 1 NC_012880.1 PFAM: methyltransferase type 11; KEGG: NMT1; NMT1 (N-METHYLTRANSFERASE 1); phosphoethanolamine N-methyltransferase; type 11 methyltransferase 3053536 8086994 Dd703_2603 Dickeya dadantii Ech703 type 11 methyltransferase YP_002988202.1 3052817 R 579405 CDS YP_002988203.1 242240022 8086995 complement(3053547..3053804) 1 NC_012880.1 KEGG: sei:SPC_4455 hypothetical protein; hypothetical protein 3053804 8086995 Dd703_2604 Dickeya dadantii Ech703 hypothetical protein YP_002988203.1 3053547 R 579405 CDS YP_002988204.1 242240023 8086996 complement(3055085..3055483) 1 NC_012880.1 PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA1665 DNA-binding protein Hns; histone family protein nucleoid-structuring protein H-NS 3055483 8086996 Dd703_2605 Dickeya dadantii Ech703 histone family protein nucleoid-structuring protein H-NS YP_002988204.1 3055085 R 579405 CDS YP_002988205.1 242240024 8086997 3056363..3056992 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0583 TetR family transcriptional regulator; TetR family transcriptional regulator 3056992 8086997 Dd703_2606 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002988205.1 3056363 D 579405 CDS YP_002988206.1 242240025 8086998 3056995..3057177 1 NC_012880.1 hypothetical protein 3057177 8086998 Dd703_2607 Dickeya dadantii Ech703 hypothetical protein YP_002988206.1 3056995 D 579405 CDS YP_002988207.1 242240026 8086999 3057427..3057615 1 NC_012880.1 KEGG: eca:ECA3166 hypothetical protein; hypothetical protein 3057615 8086999 Dd703_2608 Dickeya dadantii Ech703 hypothetical protein YP_002988207.1 3057427 D 579405 CDS YP_002988208.1 242240027 8087000 complement(3057720..3057851) 1 NC_012880.1 hypothetical protein 3057851 8087000 Dd703_2609 Dickeya dadantii Ech703 hypothetical protein YP_002988208.1 3057720 R 579405 CDS YP_002988209.1 242240028 8087001 3058042..3058869 1 NC_012880.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; alternative NifH, may be molybdenum-independent; nitrogenase reductase 3058869 anfH 8087001 anfH Dickeya dadantii Ech703 nitrogenase reductase YP_002988209.1 3058042 D 579405 CDS YP_002988210.1 242240029 8087002 3058941..3060512 1 NC_012880.1 TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; nitrogenase iron-iron protein, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; KEGG: rru:Rru_A1394 nitrogenase iron-iron protein, alpha chain; nitrogenase alpha chain 3060512 8087002 Dd703_2611 Dickeya dadantii Ech703 nitrogenase alpha chain YP_002988210.1 3058941 D 579405 CDS YP_002988211.1 242240030 8087003 3060509..3060883 1 NC_012880.1 KEGG: rru:Rru_A1393 nitrogenase; TIGRFAM: Fe-only nitrogenase, subunit delta; PFAM: Vanadium/alternative nitrogenase delta subunit; Fe-only nitrogenase subunit delta 3060883 8087003 Dd703_2612 Dickeya dadantii Ech703 Fe-only nitrogenase subunit delta YP_002988211.1 3060509 D 579405 CDS YP_002988212.1 242240031 8087004 3060897..3062285 1 NC_012880.1 KEGG: rru:Rru_A1392 nitrogenase; TIGRFAM: Fe-only nitrogenase subunit beta; PFAM: oxidoreductase/nitrogenase component 1; Fe-only nitrogenase subunit beta 3062285 8087004 Dd703_2613 Dickeya dadantii Ech703 Fe-only nitrogenase subunit beta YP_002988212.1 3060897 D 579405 CDS YP_002988213.1 242240032 8087005 3062373..3062792 1 NC_012880.1 KEGG: dal:Dalk_1513 hypothetical protein; hypothetical protein 3062792 8087005 Dd703_2614 Dickeya dadantii Ech703 hypothetical protein YP_002988213.1 3062373 D 579405 CDS YP_002988214.1 242240033 8087006 3062837..3063295 1 NC_012880.1 KEGG: rpa:RPA1432 nitroimidazole resistance protein; nitroimidazole resistance protein 3063295 8087006 Dd703_2615 Dickeya dadantii Ech703 nitroimidazole resistance protein YP_002988214.1 3062837 D 579405 CDS YP_002988215.1 242240034 8087007 3063333..3063959 1 NC_012880.1 TIGRFAM: Fe-only nitrogenase accessory protein AnfO; KEGG: rpt:Rpal_1619 Fe-only nitrogenase accessory protein AnfO; Fe-only nitrogenase accessory protein AnfO 3063959 8087007 Dd703_2616 Dickeya dadantii Ech703 Fe-only nitrogenase accessory protein AnfO YP_002988215.1 3063333 D 579405 CDS YP_002988216.1 242240035 8087008 3064329..3065936 1 NC_012880.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: GAF domain protein; ATPase AAA; KEGG: rpa:RPA1374 sigma-54 dependent, vanadium nitrogenase transcriptional regulator, VnfA; Fis family transcriptional regulator 3065936 8087008 Dd703_2617 Dickeya dadantii Ech703 Fis family transcriptional regulator YP_002988216.1 3064329 D 579405 CDS YP_002988217.1 242240036 8087009 3066092..3067201 1 NC_012880.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: ara:Arad_9875 inosine-uridine preferring nucleoside hydrolase protein; inosine/uridine-preferring nucleoside hydrolase 3067201 8087009 Dd703_2618 Dickeya dadantii Ech703 inosine/uridine-preferring nucleoside hydrolase YP_002988217.1 3066092 D 579405 CDS YP_002988218.1 242240037 8087010 complement(3067238..3068140) 1 NC_012880.1 KEGG: bxe:Bxe_C0823 tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate N-succinyltransferase 3068140 8087010 Dd703_2619 Dickeya dadantii Ech703 tetrahydrodipicolinate N-succinyltransferase YP_002988218.1 3067238 R 579405 CDS YP_002988219.1 242240038 8087011 3068532..3069122 1 NC_012880.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: eca:ECA1475 hypothetical protein; flavin reductase domain-containing protein 3069122 8087011 Dd703_2620 Dickeya dadantii Ech703 flavin reductase domain-containing protein YP_002988219.1 3068532 D 579405 CDS YP_002988220.1 242240039 8087012 complement(3069348..3069563) 1 NC_012880.1 KEGG: kpe:KPK_1527 hypothetical protein; hypothetical protein 3069563 8087012 Dd703_2621 Dickeya dadantii Ech703 hypothetical protein YP_002988220.1 3069348 R 579405 CDS YP_002988221.1 242240040 8087013 complement(3069939..3070514) 1 NC_012880.1 PFAM: methyltransferase type 11; KEGG: afw:Anae109_1351 methyltransferase type 11; type 11 methyltransferase 3070514 8087013 Dd703_2622 Dickeya dadantii Ech703 type 11 methyltransferase YP_002988221.1 3069939 R 579405 CDS YP_002988222.1 242240041 8087014 complement(3070676..3072277) 1 NC_012880.1 PFAM: gamma-glutamyltranspeptidase; KEGG: ent:Ent638_0756 gamma-glutamyltransferase; gamma-glutamyltransferase 3072277 8087014 Dd703_2623 Dickeya dadantii Ech703 gamma-glutamyltransferase YP_002988222.1 3070676 R 579405 CDS YP_002988223.1 242240042 8087015 complement(3072288..3073160) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ent:Ent638_0755 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 3073160 8087015 Dd703_2624 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988223.1 3072288 R 579405 CDS YP_002988224.1 242240043 8087016 complement(3073163..3074104) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ent:Ent638_0754 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 3074104 8087016 Dd703_2625 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988224.1 3073163 R 579405 CDS YP_002988225.1 242240044 8087017 complement(3074120..3075631) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: ent:Ent638_0753 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3075631 8087017 Dd703_2626 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002988225.1 3074120 R 579405 CDS YP_002988226.1 242240045 8087018 complement(3075652..3076716) 1 NC_012880.1 KEGG: ent:Ent638_0752 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3076716 8087018 Dd703_2627 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002988226.1 3075652 R 579405 CDS YP_002988227.1 242240046 8088314 complement(3076713..3077717) 1 NC_012880.1 KEGG: ent:Ent638_0751 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3077717 8088314 Dd703_2628 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002988227.1 3076713 R 579405 CDS YP_002988228.1 242240047 8088315 complement(3077714..3078436) 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ent:Ent638_0750 GntR family transcriptional regulator; GntR family transcriptional regulator 3078436 8088315 Dd703_2629 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002988228.1 3077714 R 579405 CDS YP_002988229.1 242240048 8088316 3080113..3080787 1 NC_012880.1 PFAM: nucleoside recognition domain protein; KEGG: kpe:KPK_4862 transporter gate domain protein; nucleoside recognition domain-containing protein 3080787 8088316 Dd703_2630 Dickeya dadantii Ech703 nucleoside recognition domain-containing protein YP_002988229.1 3080113 D 579405 CDS YP_002988230.1 242240049 8088317 3080777..3081250 1 NC_012880.1 PFAM: nucleoside recognition domain protein; KEGG: kpe:KPK_4861 transporter gate domain protein; hypothetical protein 3081250 8088317 Dd703_2631 Dickeya dadantii Ech703 hypothetical protein YP_002988230.1 3080777 D 579405 CDS YP_002988231.1 242240050 8088318 3081278..3082381 1 NC_012880.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: kpe:KPK_4860 amidohydrolase family protein; amidohydrolase 3082381 8088318 Dd703_2632 Dickeya dadantii Ech703 amidohydrolase YP_002988231.1 3081278 D 579405 CDS YP_002988232.1 242240051 8088319 3083003..3083617 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: acr:Acry_3038 TetR family transcriptional regulator; TetR family transcriptional regulator 3083617 8088319 Dd703_2633 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002988232.1 3083003 D 579405 CDS YP_002988233.1 242240052 8088320 complement(3083647..3084729) 1 NC_012880.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: plu:plu4115 glycerol dehydrogenase; iron-containing alcohol dehydrogenase 3084729 8088320 Dd703_2634 Dickeya dadantii Ech703 iron-containing alcohol dehydrogenase YP_002988233.1 3083647 R 579405 CDS YP_002988234.1 242240053 8088321 3085077..3086291 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: efe:EFER_1525 enolase/dehydratase; mandelate racemase/muconate lactonizing protein 3086291 8088321 Dd703_2635 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002988234.1 3085077 D 579405 CDS YP_002988235.1 242240054 8088322 3086305..3087327 1 NC_012880.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: eca:ECA0918 dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 3087327 8088322 Dd703_2636 Dickeya dadantii Ech703 alcohol dehydrogenase GroES domain-containing protein YP_002988235.1 3086305 D 579405 CDS YP_002988236.1 242240055 8088323 3087695..3089116 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA0919 transporter; major facilitator superfamily protein 3089116 8088323 Dd703_2637 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988236.1 3087695 D 579405 CDS YP_002988237.1 242240056 8088324 3089123..3090595 1 NC_012880.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0920 carbohydrate oxidoreductase; mannitol dehydrogenase 3090595 8088324 Dd703_2638 Dickeya dadantii Ech703 mannitol dehydrogenase YP_002988237.1 3089123 D 579405 CDS YP_002988238.1 242240057 8088325 3090754..3091440 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0921 GntR family transcriptional regulator; GntR family transcriptional regulator 3091440 8088325 Dd703_2639 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002988238.1 3090754 D 579405 CDS YP_002988239.1 242240058 8088326 3091496..3091999 1 NC_012880.1 KEGG: smd:Smed_0204 hypothetical protein; hypothetical protein 3091999 8088326 Dd703_2640 Dickeya dadantii Ech703 hypothetical protein YP_002988239.1 3091496 D 579405 CDS YP_002988240.1 242240059 8088327 complement(3092135..3093820) 1 NC_012880.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 3093820 8088327 Dd703_2641 Dickeya dadantii Ech703 urocanate hydratase YP_002988240.1 3092135 R 579405 CDS YP_002988241.1 242240060 8088328 complement(3093834..3095390) 1 NC_012880.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 3095390 8088328 Dd703_2642 Dickeya dadantii Ech703 histidine ammonia-lyase YP_002988241.1 3093834 R 579405 CDS YP_002988242.1 242240061 8088329 complement(3095629..3096414) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: reu:Reut_A2718 ABC transporter; ABC transporter 3096414 8088329 Dd703_2643 Dickeya dadantii Ech703 ABC transporter YP_002988242.1 3095629 R 579405 CDS YP_002988243.1 242240062 8088330 complement(3096411..3097259) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cti:RALTA_A2495 ABC-type transporter membrane component; binding-protein-dependent transporters inner membrane component 3097259 8088330 Dd703_2644 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988243.1 3096411 R 579405 CDS YP_002988244.1 242240063 8088331 complement(3097279..3098241) 1 NC_012880.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; KEGG: rme:Rmet_2859 substrate-binding region of ABC-type glycine betaine transporter; glycine/betaine ABC transporter substrate-binding protein 3098241 8088331 Dd703_2645 Dickeya dadantii Ech703 glycine/betaine ABC transporter substrate-binding protein YP_002988244.1 3097279 R 579405 CDS YP_002988245.1 242240064 8088332 complement(3098449..3099129) 1 NC_012880.1 PFAM: peptidase S14 ClpP; KEGG: mes:Meso_1336 peptidase S14, ClpP; peptidase S14 ClpP 3099129 8088332 Dd703_2646 Dickeya dadantii Ech703 peptidase S14 ClpP YP_002988245.1 3098449 R 579405 CDS YP_002988246.1 242240065 8088333 3099435..3100190 1 NC_012880.1 KEGG: spe:Spro_2078 histidine utilization repressor; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3100190 8088333 Dd703_2647 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002988246.1 3099435 D 579405 CDS YP_002988247.1 242240066 8088334 complement(3100212..3101714) 1 NC_012880.1 KEGG: kpe:KPK_3142 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 3101714 8088334 Dd703_2648 Dickeya dadantii Ech703 histidine ammonia-lyase YP_002988247.1 3100212 R 579405 CDS YP_002988248.1 242240067 8088335 complement(3101727..3102509) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpe:KPK_3143 amino acid ABC transporter ATP-binding protein; ABC transporter 3102509 8088335 Dd703_2649 Dickeya dadantii Ech703 ABC transporter YP_002988248.1 3101727 R 579405 CDS YP_002988249.1 242240068 8088336 complement(3102502..3103221) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpe:KPK_3144 amino acid ABC transporter permease; polar amino acid ABC transporter permease 3103221 8088336 Dd703_2650 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002988249.1 3102502 R 579405 CDS YP_002988250.1 242240069 8088337 complement(3103218..3103940) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpe:KPK_3145 amino acid ABC transporter permease; polar amino acid ABC transporter permease 3103940 8088337 Dd703_2651 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002988250.1 3103218 R 579405 CDS YP_002988251.1 242240070 8088338 complement(3103956..3104813) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: kpe:KPK_3146 amino acid ABC transporter periplasmic amino acid-binding protein; family 3 extracellular solute-binding protein 3104813 8088338 Dd703_2652 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002988251.1 3103956 R 579405 CDS YP_002988252.1 242240071 8088339 complement(3105069..3105614) 1 NC_012880.1 PFAM: protein of unknown function DUF886; KEGG: esa:ESA_02151 hypothetical protein; hypothetical protein 3105614 8088339 Dd703_2653 Dickeya dadantii Ech703 hypothetical protein YP_002988252.1 3105069 R 579405 CDS YP_002988253.1 242240072 8088340 complement(3105611..3106975) 1 NC_012880.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 3106975 8088340 Dd703_2654 Dickeya dadantii Ech703 N-formimino-L-glutamate deiminase YP_002988253.1 3105611 R 579405 CDS YP_002988254.1 242240073 8088341 3107178..3108389 1 NC_012880.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 3108389 8088341 Dd703_2655 Dickeya dadantii Ech703 imidazolonepropionase YP_002988254.1 3107178 D 579405 CDS YP_002988255.1 242240074 8088342 3108389..3109189 1 NC_012880.1 TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 3109189 8088342 Dd703_2656 Dickeya dadantii Ech703 N-formylglutamate amidohydrolase YP_002988255.1 3108389 D 579405 CDS YP_002988256.1 242240075 8088343 complement(3109206..3111146) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; nitrate and nitrite sensing domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA0434 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3111146 8088343 Dd703_2657 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002988256.1 3109206 R 579405 CDS YP_002988257.1 242240076 8088344 3111630..3112499 1 NC_012880.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 3112499 8088344 Dd703_2658 Dickeya dadantii Ech703 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002988257.1 3111630 D 579405 CDS YP_002988258.1 242240077 8088345 3112505..3112717 1 NC_012880.1 KEGG: eca:ECA3150 hypothetical protein; hypothetical protein 3112717 8088345 Dd703_2659 Dickeya dadantii Ech703 hypothetical protein YP_002988258.1 3112505 D 579405 CDS YP_002988259.1 242240078 8088346 complement(3112799..3114184) 1 NC_012880.1 KEGG: ent:Ent638_0980 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); cysteinyl-tRNA synthetase 3114184 8088346 Dd703_2660 Dickeya dadantii Ech703 cysteinyl-tRNA synthetase YP_002988259.1 3112799 R 579405 CDS YP_002988260.1 242240079 8088347 complement(3114543..3114965) 1 NC_012880.1 PFAM: DoxX family protein; KEGG: eca:ECA3152 hypothetical protein; DoxX family protein 3114965 8088347 Dd703_2661 Dickeya dadantii Ech703 DoxX family protein YP_002988260.1 3114543 R 579405 CDS YP_002988261.1 242240080 8088348 3115304..3115798 1 NC_012880.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: eca:ECA3154 peptidyl-prolyl cis-trans isomerase B (rotamase B); peptidyl-prolyl cis-trans isomerase B 3115798 8088348 Dd703_2662 Dickeya dadantii Ech703 peptidyl-prolyl cis-trans isomerase B YP_002988261.1 3115304 D 579405 CDS YP_002988262.1 242240081 8088349 3115808..3116533 1 NC_012880.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: eca:ECA3155 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 3116533 8088349 Dd703_2663 Dickeya dadantii Ech703 UDP-2,3-diacylglucosamine hydrolase YP_002988262.1 3115808 D 579405 CDS YP_002988263.1 242240082 8088350 3116756..3117265 1 NC_012880.1 KEGG: eca:ECA3156 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3117265 8088350 Dd703_2664 Dickeya dadantii Ech703 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002988263.1 3116756 D 579405 CDS YP_002988264.1 242240083 8088351 3117262..3118332 1 NC_012880.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 3118332 8088351 Dd703_2665 Dickeya dadantii Ech703 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_002988264.1 3117262 D 579405 CDS YP_002988265.1 242240084 8088352 3118995..3120278 1 NC_012880.1 TIGRFAM: serine transporter; PFAM: aromatic amino acid permease; Spore germination protein; KEGG: eca:ECA3158 serine transporter; serine transporter 3120278 8088352 Dd703_2666 Dickeya dadantii Ech703 serine transporter YP_002988265.1 3118995 D 579405 CDS YP_002988266.1 242240085 8088353 3120430..3121800 1 NC_012880.1 KEGG: eca:ECA3159 L-serine dehydratase 2; TIGRFAM: L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 3121800 8088353 Dd703_2667 Dickeya dadantii Ech703 L-serine dehydratase YP_002988266.1 3120430 D 579405 CDS YP_002988267.1 242240086 8088354 complement(3122202..3122696) 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA3160 transcriptional regulator; XRE family transcriptional regulator 3122696 8088354 Dd703_2668 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002988267.1 3122202 R 579405 CDS YP_002988268.1 242240087 8088355 complement(3122785..3123600) 1 NC_012880.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 3123600 8088355 Dd703_2669 Dickeya dadantii Ech703 phosphate transporter ATP-binding protein YP_002988268.1 3122785 R 579405 CDS YP_002988269.1 242240088 8088356 complement(3123618..3125264) 1 NC_012880.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3162 phosphate ABC transporter permease; phosphate ABC transporter permease 3125264 8088356 Dd703_2670 Dickeya dadantii Ech703 phosphate ABC transporter permease YP_002988269.1 3123618 R 579405 CDS YP_002988270.1 242240089 8088357 complement(3125261..3127417) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3163 phosphate ABC transporter permease protein; binding-protein-dependent transporters inner membrane component 3127417 8088357 Dd703_2671 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988270.1 3125261 R 579405 CDS YP_002988271.1 242240090 8088358 3127666..3129735 1 NC_012880.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3129735 8088358 Dd703_2672 Dickeya dadantii Ech703 polyphosphate kinase YP_002988271.1 3127666 D 579405 CDS YP_002988272.1 242240091 8088359 3129740..3131269 1 NC_012880.1 PFAM: Ppx/GppA phosphatase; KEGG: eca:ECA3165 exopolyphosphatase; exopolyphosphatase 3131269 8088359 Dd703_2673 Dickeya dadantii Ech703 exopolyphosphatase YP_002988272.1 3129740 D 579405 CDS YP_002988273.1 242240092 8088360 3131473..3131694 1 NC_012880.1 KEGG: esa:ESA_00757 hypothetical protein; hypothetical protein 3131694 8088360 Dd703_2674 Dickeya dadantii Ech703 hypothetical protein YP_002988273.1 3131473 D 579405 CDS YP_002988274.1 242240093 8088361 3131933..3132199 1 NC_012880.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: kpe:KPK_3736 C4-type hypothetical protein, DksA/TraR family; hypothetical protein 3132199 8088361 Dd703_2675 Dickeya dadantii Ech703 hypothetical protein YP_002988274.1 3131933 D 579405 CDS YP_002988275.1 242240094 8088362 complement(3132234..3132662) 1 NC_012880.1 PFAM: UspA domain protein; KEGG: eca:ECA1769 hypothetical protein; UspA domain-containing protein 3132662 8088362 Dd703_2676 Dickeya dadantii Ech703 UspA domain-containing protein YP_002988275.1 3132234 R 579405 CDS YP_002988276.1 242240095 8088363 3132872..3133237 1 NC_012880.1 KEGG: elf:LF82_3563 uncharacterized protein YneG; hypothetical protein 3133237 8088363 Dd703_2677 Dickeya dadantii Ech703 hypothetical protein YP_002988276.1 3132872 D 579405 CDS YP_002988277.1 242240096 8088364 complement(3133220..3133774) 1 NC_012880.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE3592 isochorismatase family protein; isochorismatase hydrolase 3133774 8088364 Dd703_2678 Dickeya dadantii Ech703 isochorismatase hydrolase YP_002988277.1 3133220 R 579405 CDS YP_002988278.1 242240097 8088365 complement(3133881..3135047) 1 NC_012880.1 KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; nucleotide sugar dehydrogenase 3135047 8088365 Dd703_2679 Dickeya dadantii Ech703 nucleotide sugar dehydrogenase YP_002988278.1 3133881 R 579405 CDS YP_002988279.1 242240098 8088366 complement(3135057..3136346) 1 NC_012880.1 TIGRFAM: methyltransferase FkbM family; KEGG: mfa:Mfla_0764 methyltransferase FkbM; FkbM family methyltransferase 3136346 8088366 Dd703_2680 Dickeya dadantii Ech703 FkbM family methyltransferase YP_002988279.1 3135057 R 579405 CDS YP_002988280.1 242240099 8088367 complement(3136361..3137632) 1 NC_012880.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH1415 hypothetical protein; group 1 glycosyl transferase 3137632 8088367 Dd703_2681 Dickeya dadantii Ech703 group 1 glycosyl transferase YP_002988280.1 3136361 R 579405 CDS YP_002988281.1 242240100 8088368 complement(3137637..3138764) 1 NC_012880.1 PFAM: glycosyl transferase group 1; KEGG: pla:Plav_2494 glycosyl transferase group 1; group 1 glycosyl transferase 3138764 8088368 Dd703_2682 Dickeya dadantii Ech703 group 1 glycosyl transferase YP_002988281.1 3137637 R 579405 CDS YP_002988282.1 242240101 8088369 complement(3139656..3140396) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: xfn:XfasM23_2056 ABC transporter; ABC transporter 3140396 8088369 Dd703_2683 Dickeya dadantii Ech703 ABC transporter YP_002988282.1 3139656 R 579405 CDS YP_002988283.1 242240102 8088370 complement(3140406..3141209) 1 NC_012880.1 PFAM: ABC transporter; KEGG: xfm:Xfasm12_2139 ABC transporter permease; ABC transporter 3141209 8088370 Dd703_2684 Dickeya dadantii Ech703 ABC transporter YP_002988283.1 3140406 R 579405 CDS YP_002988284.1 242240103 8088371 complement(3141209..3142138) 1 NC_012880.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: met:M446_4668 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3142138 8088371 Dd703_2685 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002988284.1 3141209 R 579405 CDS YP_002988285.1 242240104 8088373 3142630..3143289 1 NC_012880.1 PFAM: protein of unknown function UPF0005; KEGG: eca:ECA1763 hypothetical protein; hypothetical protein 3143289 8088373 Dd703_2686 Dickeya dadantii Ech703 hypothetical protein YP_002988285.1 3142630 D 579405 CDS YP_002988286.1 242240105 8088374 3143432..3143761 1 NC_012880.1 TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: ypi:YpsIP31758_2529 sulfurtransferase TusE; TusE/DsrC/DsvC family sulfur relay protein 3143761 8088374 Dd703_2687 Dickeya dadantii Ech703 TusE/DsrC/DsvC family sulfur relay protein YP_002988286.1 3143432 D 579405 CDS YP_002988287.1 242240106 8088375 complement(3143765..3144043) 1 NC_012880.1 PFAM: acylphosphatase; KEGG: ypg:YpAngola_A3210 acylphosphatase; acylphosphatase 3144043 8088375 Dd703_2688 Dickeya dadantii Ech703 acylphosphatase YP_002988287.1 3143765 R 579405 CDS YP_002988288.1 242240107 8088376 3144253..3144561 1 NC_012880.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: eca:ECA1760 hypothetical protein; heat shock protein HspQ 3144561 8088376 Dd703_2689 Dickeya dadantii Ech703 heat shock protein HspQ YP_002988288.1 3144253 D 579405 CDS YP_002988289.1 242240108 8088377 complement(3144613..3145209) 1 NC_012880.1 PFAM: CoA-binding protein; KEGG: eca:ECA1759 CoA binding protein; CoA-binding protein 3145209 8088377 Dd703_2690 Dickeya dadantii Ech703 CoA-binding protein YP_002988289.1 3144613 R 579405 CDS YP_002988290.1 242240109 8088378 3145368..3145826 1 NC_012880.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 3145826 mgsA 8088378 mgsA Dickeya dadantii Ech703 methylglyoxal synthase YP_002988290.1 3145368 D 579405 CDS YP_002988291.1 242240110 8088379 complement(3145876..3147933) 1 NC_012880.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 3147933 helD 8088379 helD Dickeya dadantii Ech703 DNA helicase IV YP_002988291.1 3145876 R 579405 CDS YP_002988292.1 242240111 8088380 3148090..3148536 1 NC_012880.1 PFAM: protein of unknown function DUF307; KEGG: efe:EFER_1098 conserved hypothetical protein; inner membrane protein; hypothetical protein 3148536 8088380 Dd703_2693 Dickeya dadantii Ech703 hypothetical protein YP_002988292.1 3148090 D 579405 CDS YP_002988293.1 242240112 8088381 3148545..3150710 1 NC_012880.1 TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: eca:ECA1754 hypothetical protein; hypothetical protein 3150710 8088381 Dd703_2694 Dickeya dadantii Ech703 hypothetical protein YP_002988293.1 3148545 D 579405 CDS YP_002988294.1 242240113 8088382 3150847..3151887 1 NC_012880.1 PFAM: Integrase catalytic region; KEGG: son:SO_A0151 ISSod13, transposase; Integrase catalytic subunit 3151887 8088382 Dd703_2695 Dickeya dadantii Ech703 Integrase catalytic subunit YP_002988294.1 3150847 D 579405 CDS YP_002988295.1 242240114 8088383 complement(3152017..3152643) 1 NC_012880.1 PFAM: TfoX domain protein; KEGG: eca:ECA1753 hypothetical protein; competence-specific genes regulator 3152643 8088383 Dd703_2696 Dickeya dadantii Ech703 competence-specific genes regulator YP_002988295.1 3152017 R 579405 CDS YP_002988296.1 242240115 8088384 3152862..3153356 1 NC_012880.1 PFAM: cell division inhibitor SulA; KEGG: eca:ECA1752 SOS cell division inhibitor; SOS cell division inhibitor 3153356 8088384 Dd703_2697 Dickeya dadantii Ech703 SOS cell division inhibitor YP_002988296.1 3152862 D 579405 CDS YP_002988297.1 242240116 8088385 3153721..3154785 1 NC_012880.1 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein A 3154785 8088385 Dd703_2698 Dickeya dadantii Ech703 outer membrane protein A YP_002988297.1 3153721 D 579405 CDS YP_002988298.1 242240117 8088386 complement(3154903..3155043) 1 NC_012880.1 hypothetical protein 3155043 8088386 Dd703_2699 Dickeya dadantii Ech703 hypothetical protein YP_002988298.1 3154903 R 579405 CDS YP_002988299.1 242240118 8088387 complement(3155130..3156095) 1 NC_012880.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3182 oxidoreductase; aldo/keto reductase 3156095 8088387 Dd703_2700 Dickeya dadantii Ech703 aldo/keto reductase YP_002988299.1 3155130 R 579405 CDS YP_002988300.1 242240119 8088388 3156338..3157522 1 NC_012880.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: spe:Spro_3416 nucleoside transporter; nucleoside transporter 3157522 8088388 Dd703_2701 Dickeya dadantii Ech703 nucleoside transporter YP_002988300.1 3156338 D 579405 CDS YP_002988301.1 242240120 8088389 3157729..3158964 1 NC_012880.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA 3158964 8088389 Dd703_2702 Dickeya dadantii Ech703 multidrug efflux system subunit MdtA YP_002988301.1 3157729 D 579405 CDS YP_002988302.1 242240121 8088390 3158964..3162086 1 NC_012880.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB 3162086 8088390 Dd703_2703 Dickeya dadantii Ech703 multidrug efflux system subunit MdtB YP_002988302.1 3158964 D 579405 CDS YP_002988303.1 242240122 8088391 3162083..3165175 1 NC_012880.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC 3165175 8088391 Dd703_2704 Dickeya dadantii Ech703 multidrug efflux system subunit MdtC YP_002988303.1 3162083 D 579405 CDS YP_002988304.1 242240123 8088392 3165268..3166671 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3187 multidrug efflux system protein MdtE; multidrug efflux system protein MdtE 3166671 8088392 Dd703_2705 Dickeya dadantii Ech703 multidrug efflux system protein MdtE YP_002988304.1 3165268 D 579405 CDS YP_002988305.1 242240124 8088393 3166680..3168041 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: eca:ECA3188 signal transduction histidine-protein kinase BaeS; signal transduction histidine-protein kinase BaeS 3168041 8088393 Dd703_2706 Dickeya dadantii Ech703 signal transduction histidine-protein kinase BaeS YP_002988305.1 3166680 D 579405 CDS YP_002988306.1 242240125 8088394 3168059..3168790 1 NC_012880.1 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR 3168790 8088394 Dd703_2707 Dickeya dadantii Ech703 DNA-binding transcriptional regulator BaeR YP_002988306.1 3168059 D 579405 CDS YP_002988307.1 242240126 8089529 3168909..3169871 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: eca:ECA3192 hypothetical protein; glutathione transferase 3169871 8089529 Dd703_2708 Dickeya dadantii Ech703 glutathione transferase YP_002988307.1 3168909 D 579405 CDS YP_002988308.1 242240127 8089530 3170160..3171521 1 NC_012880.1 PFAM: peptidase U32; KEGG: eca:ECA3193 protease; peptidase U32 3171521 8089530 Dd703_2709 Dickeya dadantii Ech703 peptidase U32 YP_002988308.1 3170160 D 579405 CDS YP_002988309.1 242240128 8089531 complement(3171935..3172342) 1 NC_012880.1 PFAM: phosphate-starvation-inducible E; KEGG: eca:ECA3195 phosphate-starvation-inducible protein PsiE; phosphate-starvation-inducible protein PsiE 3172342 8089531 Dd703_2710 Dickeya dadantii Ech703 phosphate-starvation-inducible protein PsiE YP_002988309.1 3171935 R 579405 CDS YP_002988310.1 242240129 8089532 complement(3172518..3173321) 1 NC_012880.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 3173321 8089532 Dd703_2711 Dickeya dadantii Ech703 phosphomethylpyrimidine kinase YP_002988310.1 3172518 R 579405 CDS YP_002988311.1 242240130 8089533 complement(3173318..3174106) 1 NC_012880.1 KEGG: eca:ECA3197 hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 3174106 8089533 Dd703_2712 Dickeya dadantii Ech703 hydroxyethylthiazole kinase YP_002988311.1 3173318 R 579405 CDS YP_002988312.1 242240131 8089534 complement(3174416..3174808) 1 NC_012880.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA3501 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3174808 8089534 Dd703_2713 Dickeya dadantii Ech703 glyoxalase/bleomycin resistance protein/dioxygenase YP_002988312.1 3174416 R 579405 CDS YP_002988313.1 242240132 8089535 complement(3174968..3175969) 1 NC_012880.1 KEGG: esa:ESA_02629 hypothetical protein; hypothetical protein 3175969 8089535 Dd703_2714 Dickeya dadantii Ech703 hypothetical protein YP_002988313.1 3174968 R 579405 CDS YP_002988314.1 242240133 8089536 3176363..3177061 1 NC_012880.1 KEGG: hypothetical protein; hypothetical protein 3177061 8089536 Dd703_2715 Dickeya dadantii Ech703 hypothetical protein YP_002988314.1 3176363 D 579405 CDS YP_002988315.1 242240134 8089537 3177068..3177352 1 NC_012880.1 hypothetical protein 3177352 8089537 Dd703_2716 Dickeya dadantii Ech703 hypothetical protein YP_002988315.1 3177068 D 579405 CDS YP_002988316.1 242240135 8089538 complement(3177305..3178135) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xac:XAC0539 short chain dehydrogenase; short chain dehydrogenase 3178135 8089538 Dd703_2717 Dickeya dadantii Ech703 short chain dehydrogenase YP_002988316.1 3177305 R 579405 CDS YP_002988317.1 242240136 8089539 complement(3178263..3178883) 1 NC_012880.1 KEGG: xac:XAC0537 hypothetical protein; hypothetical protein 3178883 8089539 Dd703_2718 Dickeya dadantii Ech703 hypothetical protein YP_002988317.1 3178263 R 579405 CDS YP_002988318.1 242240137 8089540 complement(3179151..3179924) 1 NC_012880.1 KEGG: eca:ECA3203 hypothetical protein; hypothetical protein 3179924 8089540 Dd703_2719 Dickeya dadantii Ech703 hypothetical protein YP_002988318.1 3179151 R 579405 CDS YP_002988319.1 242240138 8089541 complement(3180583..3180891) 1 NC_012880.1 KEGG: ent:Ent638_0388 hypothetical protein; hypothetical protein 3180891 8089541 Dd703_2720 Dickeya dadantii Ech703 hypothetical protein YP_002988319.1 3180583 R 579405 CDS YP_002988320.1 242240139 8089542 complement(3180912..3181535) 1 NC_012880.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bch:Bcen2424_3293 (acyl-carrier-protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) 3181535 8089542 Dd703_2721 Dickeya dadantii Ech703 NAD(P)H dehydrogenase (quinone) YP_002988320.1 3180912 R 579405 CDS YP_002988321.1 242240140 8089543 complement(3181559..3182428) 1 NC_012880.1 KEGG: bcm:Bcenmc03_1718 hypothetical protein; hypothetical protein 3182428 8089543 Dd703_2722 Dickeya dadantii Ech703 hypothetical protein YP_002988321.1 3181559 R 579405 CDS YP_002988322.1 242240141 8089544 3182507..3183502 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_6323 AraC family transcriptional regulator; AraC family transcriptional regulator 3183502 8089544 Dd703_2723 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002988322.1 3182507 D 579405 CDS YP_002988323.1 242240142 8089545 3183710..3184834 1 NC_012880.1 PFAM: hypothetical protein; KEGG: pna:Pnap_4045 hypothetical protein; hypothetical protein 3184834 8089545 Dd703_2724 Dickeya dadantii Ech703 hypothetical protein YP_002988323.1 3183710 D 579405 CDS YP_002988324.1 242240143 8089546 3184827..3185912 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mag:amb2954 signal transduction histidine kinase; histidine kinase 3185912 8089546 Dd703_2725 Dickeya dadantii Ech703 histidine kinase YP_002988324.1 3184827 D 579405 CDS YP_002988325.1 242240144 8089547 3185903..3187000 1 NC_012880.1 PFAM: metal-dependent hydrolase HDOD; response regulator receiver; SMART: response regulator receiver; KEGG: smt:Smal_3319 signal transduction protein; signal transduction protein 3187000 8089547 Dd703_2726 Dickeya dadantii Ech703 signal transduction protein YP_002988325.1 3185903 D 579405 CDS YP_002988326.1 242240145 8089548 3186993..3188135 1 NC_012880.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sat:SYN_01373 hydrogenase transcriptional regulatory protein; response regulator receiver protein 3188135 8089548 Dd703_2727 Dickeya dadantii Ech703 response regulator receiver protein YP_002988326.1 3186993 D 579405 CDS YP_002988327.1 242240146 8089549 complement(3188342..3189919) 1 NC_012880.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; KEGG: eca:ECA3208 bifunctional GMP synthase/glutamine amidotransferase protein; GMP synthase 3189919 8089549 Dd703_2728 Dickeya dadantii Ech703 GMP synthase YP_002988327.1 3188342 R 579405 CDS YP_002988328.1 242240147 8089550 complement(3190013..3191476) 1 NC_012880.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 3191476 8089550 Dd703_2729 Dickeya dadantii Ech703 inosine 5'-monophosphate dehydrogenase YP_002988328.1 3190013 R 579405 CDS YP_002988329.1 242240148 8089551 3191649..3193046 1 NC_012880.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3193046 xseA 8089551 xseA Dickeya dadantii Ech703 exodeoxyribonuclease VII large subunit YP_002988329.1 3191649 D 579405 CDS YP_002988330.1 242240149 8089552 3193202..3194275 1 NC_012880.1 PFAM: peptidase M4 thermolysin; peptidase M4 thermolysin; KEGG: eca:ECA3211 extracellular metalloprotease; peptidase M4 thermolysin 3194275 8089552 Dd703_2731 Dickeya dadantii Ech703 peptidase M4 thermolysin YP_002988330.1 3193202 D 579405 CDS YP_002988331.1 242240150 8089553 complement(3194340..3194573) 1 NC_012880.1 PFAM: protein of unknown function DUF1407; KEGG: spe:Spro_3603 hypothetical protein; hypothetical protein 3194573 8089553 Dd703_2732 Dickeya dadantii Ech703 hypothetical protein YP_002988331.1 3194340 R 579405 CDS YP_002988332.1 242240151 8089554 complement(3194737..3196221) 1 NC_012880.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3196221 engA 8089554 engA Dickeya dadantii Ech703 GTP-binding protein EngA YP_002988332.1 3194737 R 579405 CDS YP_002988333.1 242240152 8089555 complement(3196349..3197530) 1 NC_012880.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 3197530 8089555 Dd703_2734 Dickeya dadantii Ech703 outer membrane protein assembly complex subunit YfgL YP_002988333.1 3196349 R 579405 CDS YP_002988334.1 242240153 8089556 complement(3197541..3198167) 1 NC_012880.1 KEGG: eca:ECA3218 hypothetical protein; hypothetical protein 3198167 8089556 Dd703_2735 Dickeya dadantii Ech703 hypothetical protein YP_002988334.1 3197541 R 579405 CDS YP_002988335.1 242240154 8089557 complement(3198181..3199455) 1 NC_012880.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3199455 hisS 8089557 hisS Dickeya dadantii Ech703 histidyl-tRNA synthetase YP_002988335.1 3198181 R 579405 CDS YP_002988336.1 242240155 8089558 complement(3199584..3200705) 1 NC_012880.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3200705 ispG 8089558 ispG Dickeya dadantii Ech703 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002988336.1 3199584 R 579405 CDS YP_002988337.1 242240156 8089559 complement(3200740..3201711) 1 NC_012880.1 SMART: helix-turn-helix domain protein; KEGG: eca:ECA3221 hypothetical protein; cytoskeletal protein RodZ 3201711 8089559 Dd703_2738 Dickeya dadantii Ech703 cytoskeletal protein RodZ YP_002988337.1 3200740 R 579405 CDS YP_002988338.1 242240157 8089560 complement(3201701..3202447) 1 NC_012880.1 KEGG: eca:ECA3222 hypothetical protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat protein; hypotheticalprotein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 3202447 8089560 Dd703_2739 Dickeya dadantii Ech703 type IV pilus biogenesis/stability protein PilW YP_002988338.1 3201701 R 579405 CDS YP_002988339.1 242240158 8089561 complement(3202625..3203806) 1 NC_012880.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 3203806 8089561 Dd703_2740 Dickeya dadantii Ech703 ribosomal RNA large subunit methyltransferase N YP_002988339.1 3202625 R 579405 CDS YP_002988340.1 242240159 8089562 complement(3203966..3204397) 1 NC_012880.1 KEGG: plu:plu1372 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 3204397 8089562 Dd703_2741 Dickeya dadantii Ech703 nucleoside-diphosphate kinase YP_002988340.1 3203966 R 579405 CDS YP_002988341.1 242240160 8089563 3204829..3205683 1 NC_012880.1 catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; 3-mercaptopyruvate sulfurtransferase 3205683 sseA 8089563 sseA Dickeya dadantii Ech703 3-mercaptopyruvate sulfurtransferase YP_002988341.1 3204829 D 579405 CDS YP_002988342.1 242240161 8089564 complement(3205867..3206661) 1 NC_012880.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 3206661 8089564 Dd703_2743 Dickeya dadantii Ech703 enhanced serine sensitivity protein SseB YP_002988342.1 3205867 R 579405 CDS YP_002988343.1 242240162 8089565 complement(3206841..3208136) 1 NC_012880.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 3208136 8089565 Dd703_2744 Dickeya dadantii Ech703 aminopeptidase B YP_002988343.1 3206841 R 579405 CDS YP_002988344.1 242240163 8089566 complement(3208229..3208429) 1 NC_012880.1 TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: stm:STM2537 hypothetical protein; FeS assembly protein IscX 3208429 8089566 Dd703_2745 Dickeya dadantii Ech703 FeS assembly protein IscX YP_002988344.1 3208229 R 579405 CDS YP_002988345.1 242240164 8089567 complement(3208440..3208775) 1 NC_012880.1 TIGRFAM: ferredoxin 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: cko:CKO_00256 hypothetical protein; 2Fe-2S type ferredoxin 3208775 8089567 Dd703_2746 Dickeya dadantii Ech703 2Fe-2S type ferredoxin YP_002988345.1 3208440 R 579405 CDS YP_002988346.1 242240165 8089568 complement(3208778..3210628) 1 NC_012880.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 3210628 hscA 8089568 hscA Dickeya dadantii Ech703 chaperone protein HscA YP_002988346.1 3208778 R 579405 CDS YP_002988347.1 242240166 8089569 complement(3210710..3211228) 1 NC_012880.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 3211228 hscB 8089569 hscB Dickeya dadantii Ech703 co-chaperone HscB YP_002988347.1 3210710 R 579405 CDS YP_002988348.1 242240167 8089570 complement(3211339..3211662) 1 NC_012880.1 TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: yen:YE1059 iron-sulfur cluster assembly protein; iron-sulfur cluster assembly protein IscA 3211662 8089570 Dd703_2749 Dickeya dadantii Ech703 iron-sulfur cluster assembly protein IscA YP_002988348.1 3211339 R 579405 CDS YP_002988349.1 242240168 8089571 complement(3211695..3212081) 1 NC_012880.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: eca:ECA3236 scaffold protein; FeS cluster assembly scaffold IscU 3212081 8089571 Dd703_2750 Dickeya dadantii Ech703 FeS cluster assembly scaffold IscU YP_002988349.1 3211695 R 579405 CDS YP_002988350.1 242240169 8089572 complement(3212106..3213320) 1 NC_012880.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 3213320 8089572 Dd703_2751 Dickeya dadantii Ech703 cysteine desulfurase YP_002988350.1 3212106 R 579405 CDS YP_002988351.1 242240170 8089573 complement(3213378..3213872) 1 NC_012880.1 regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR 3213872 8089573 Dd703_2752 Dickeya dadantii Ech703 DNA-binding transcriptional regulator IscR YP_002988351.1 3213378 R 579405 CDS YP_002988352.1 242240171 8089574 complement(3214002..3214736) 1 NC_012880.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: eca:ECA3239 RNA methyltransferase; RNA methyltransferase, TrmH family, group 1 3214736 8089574 Dd703_2753 Dickeya dadantii Ech703 RNA methyltransferase, TrmH family, group 1 YP_002988352.1 3214002 R 579405 CDS YP_002988353.1 242240172 8089575 3214867..3215670 1 NC_012880.1 PFAM: inositol monophosphatase; KEGG: eca:ECA3240 inositol monophosphatase; inositol monophosphatase 3215670 8089575 Dd703_2754 Dickeya dadantii Ech703 inositol monophosphatase YP_002988353.1 3214867 D 579405 CDS YP_002988354.1 242240173 8089576 3215839..3216966 1 NC_012880.1 KEGG: eca:ECA3241 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 3216966 8089576 Dd703_2755 Dickeya dadantii Ech703 ABC transporter substrate-binding protein YP_002988354.1 3215839 D 579405 CDS YP_002988355.1 242240174 8089577 3216972..3218054 1 NC_012880.1 PFAM: transporter permease; KEGG: eca:ECA3242 ABC transporter permease; transporter permease 3218054 8089577 Dd703_2756 Dickeya dadantii Ech703 transporter permease YP_002988355.1 3216972 D 579405 CDS YP_002988356.1 242240175 8089578 3218051..3218851 1 NC_012880.1 PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: eca:ECA3243 ferric-enterobactin ABC transporter ATP-binding protein; ABC transporter 3218851 8089578 Dd703_2757 Dickeya dadantii Ech703 ABC transporter YP_002988356.1 3218051 D 579405 CDS YP_002988357.1 242240176 8089579 complement(3219067..3220188) 1 NC_012880.1 PFAM: periplasmic binding protein; KEGG: eca:ECA3246 periplasmic substrate-binding transporter; periplasmic binding protein 3220188 8089579 Dd703_2758 Dickeya dadantii Ech703 periplasmic binding protein YP_002988357.1 3219067 R 579405 CDS YP_002988358.1 242240177 8089580 complement(3220297..3221352) 1 NC_012880.1 PFAM: high-affinity nickel-transporter; KEGG: eca:ECA3247 hypothetical protein; high-affinity nickel-transporter 3221352 8089580 Dd703_2759 Dickeya dadantii Ech703 high-affinity nickel-transporter YP_002988358.1 3220297 R 579405 CDS YP_002988359.1 242240178 8089581 complement(3221343..3222005) 1 NC_012880.1 PFAM: protein of unknown function DUF1007; KEGG: eca:ECA3248 hypothetical protein; hypothetical protein 3222005 8089581 Dd703_2760 Dickeya dadantii Ech703 hypothetical protein YP_002988359.1 3221343 R 579405 CDS YP_002988360.1 242240179 8089582 complement(3222055..3223197) 1 NC_012880.1 transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter 3223197 8089582 Dd703_2761 Dickeya dadantii Ech703 3-phenylpropionic acid transporter YP_002988360.1 3222055 R 579405 CDS YP_002988361.1 242240180 8089583 complement(3223336..3224589) 1 NC_012880.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3224589 glyA 8089583 glyA Dickeya dadantii Ech703 serine hydroxymethyltransferase YP_002988361.1 3223336 R 579405 CDS YP_002988362.1 242240181 8089584 3225240..3226433 1 NC_012880.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xac:XAC3562 pectate lyase; Pectate lyase/Amb allergen 3226433 8089584 Dd703_2763 Dickeya dadantii Ech703 Pectate lyase/Amb allergen YP_002988362.1 3225240 D 579405 CDS YP_002988363.1 242240182 8089585 3226797..3228005 1 NC_012880.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: xac:XAC3562 pectate lyase; Pectate lyase/Amb allergen 3228005 8089585 Dd703_2764 Dickeya dadantii Ech703 Pectate lyase/Amb allergen YP_002988363.1 3226797 D 579405 CDS YP_002988364.1 242240183 8089586 3228079..3229719 1 NC_012880.1 PFAM: lipolytic protein G-D-S-L family; KEGG: eca:ECA3252 pectin acetylesterase; G-D-S-L family lipolytic protein 3229719 8089586 Dd703_2765 Dickeya dadantii Ech703 G-D-S-L family lipolytic protein YP_002988364.1 3228079 D 579405 CDS YP_002988365.1 242240184 8089587 3229805..3230905 1 NC_012880.1 PFAM: pectinesterase; KEGG: eca:ECA3253 pectinesterase A; pectinesterase 3230905 8089587 Dd703_2766 Dickeya dadantii Ech703 pectinesterase YP_002988365.1 3229805 D 579405 CDS YP_002988366.1 242240185 8089588 complement(3231241..3231579) 1 NC_012880.1 PFAM: nitrogen regulatory protein P-II; KEGG: eta:ETA_10110 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 3231579 8089588 Dd703_2767 Dickeya dadantii Ech703 nitrogen regulatory protein P-II YP_002988366.1 3231241 R 579405 CDS YP_002988367.1 242240186 8089589 complement(3231664..3233001) 1 NC_012880.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: eca:ECA3255 two-component system response regulator; two component sigma-54 specific Fis family transcriptional regulator 3233001 8089589 Dd703_2768 Dickeya dadantii Ech703 two component sigma-54 specific Fis family transcriptional regulator YP_002988367.1 3231664 R 579405 CDS YP_002988368.1 242240187 8089590 complement(3232998..3233756) 1 NC_012880.1 KEGG: eca:ECA3256 hypothetical protein; hypothetical protein 3233756 8089590 Dd703_2769 Dickeya dadantii Ech703 hypothetical protein YP_002988368.1 3232998 R 579405 CDS YP_002988369.1 242240188 8089591 complement(3233804..3235237) 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; fimbrial assembly family protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA3257 two-component system sensor kinase; histidine kinase 3235237 8089591 Dd703_2770 Dickeya dadantii Ech703 histidine kinase YP_002988369.1 3233804 R 579405 CDS YP_002988370.1 242240189 8089592 complement(3236236..3240123) 1 NC_012880.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 3240123 8089592 Dd703_2771 Dickeya dadantii Ech703 phosphoribosylformylglycinamidine synthase YP_002988370.1 3236236 R 579405 CDS YP_002988371.1 242240190 8089593 3240402..3241862 1 NC_012880.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase 3241862 8089593 Dd703_2772 Dickeya dadantii Ech703 transglycosylase YP_002988371.1 3240402 D 579405 CDS YP_002988372.1 242240191 8089594 complement(3241886..3242380) 1 NC_012880.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: eca:ECA3260 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase 3242380 8089594 Dd703_2773 Dickeya dadantii Ech703 zinc-binding CMP/dCMP deaminase YP_002988372.1 3241886 R 579405 CDS YP_002988373.1 242240192 8089595 complement(3242431..3243105) 1 NC_012880.1 TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: eca:ECA3261 hypothetical protein; hypothetical protein 3243105 8089595 Dd703_2774 Dickeya dadantii Ech703 hypothetical protein YP_002988373.1 3242431 R 579405 CDS YP_002988374.1 242240193 8089596 complement(3243106..3243999) 1 NC_012880.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 3243999 murQ 8089596 murQ Dickeya dadantii Ech703 N-acetylmuramic acid 6-phosphate etherase YP_002988374.1 3243106 R 579405 CDS YP_002988375.1 242240194 8089597 complement(3244155..3244496) 1 NC_012880.1 KEGG: eca:ECA3265 hypothetical protein; hypothetical protein 3244496 8089597 Dd703_2776 Dickeya dadantii Ech703 hypothetical protein YP_002988375.1 3244155 R 579405 CDS YP_002988376.1 242240195 8089598 3245145..3247328 1 NC_012880.1 KEGG: eca:ECA3268 toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; cyclic nucleotide-binding protein 3247328 8089598 Dd703_2777 Dickeya dadantii Ech703 cyclic nucleotide-binding protein YP_002988376.1 3245145 D 579405 CDS YP_002988377.1 242240196 8089599 complement(3247481..3249001) 1 NC_012880.1 KEGG: eca:ECA3270 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 3249001 8089599 Dd703_2778 Dickeya dadantii Ech703 PAS/PAC and GAF sensor-containing diguanylate cyclase YP_002988377.1 3247481 R 579405 CDS YP_002988378.1 242240197 8089600 complement(3249765..3250556) 1 NC_012880.1 in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein 3250556 8089600 Dd703_2779 Dickeya dadantii Ech703 EAL domain-containing protein YP_002988378.1 3249765 R 579405 CDS YP_002988379.1 242240198 8089601 3250900..3251160 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE1024 [4Fe-4S] ferredoxin; 4Fe-4S ferredoxin 3251160 8089601 Dd703_2780 Dickeya dadantii Ech703 4Fe-4S ferredoxin YP_002988379.1 3250900 D 579405 CDS YP_002988380.1 242240199 8089602 complement(3251169..3251549) 1 NC_012880.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 3251549 acpS 8089602 acpS Dickeya dadantii Ech703 4'-phosphopantetheinyl transferase YP_002988380.1 3251169 R 579405 CDS YP_002988381.1 242240200 8089603 complement(3251549..3252280) 1 NC_012880.1 KEGG: eca:ECA3275 pyridoxal phosphate biosynthetic protein PdxJ; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: pyridoxal phosphate biosynthetic protein PdxJ; pyridoxal phosphate biosynthetic protein PdxJ 3252280 8089603 Dd703_2782 Dickeya dadantii Ech703 pyridoxal phosphate biosynthetic protein PdxJ YP_002988381.1 3251549 R 579405 CDS YP_002988382.1 242240201 8089604 complement(3252355..3253089) 1 NC_012880.1 TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO; KEGG: yen:YE1019 DNA repair protein RecO; DNA repair protein RecO 3253089 8089604 Dd703_2783 Dickeya dadantii Ech703 DNA repair protein RecO YP_002988382.1 3252355 R 579405 CDS YP_002988383.1 242240202 8089605 complement(3253102..3254007) 1 NC_012880.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 3254007 era 8089605 era Dickeya dadantii Ech703 GTP-binding protein Era YP_002988383.1 3253102 R 579405 CDS YP_002988384.1 242240203 8089606 complement(3254004..3254684) 1 NC_012880.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 3254684 rnc 8089606 rnc Dickeya dadantii Ech703 ribonuclease III YP_002988384.1 3254004 R 579405 CDS YP_002988385.1 242240204 8089607 complement(3254866..3255834) 1 NC_012880.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 3255834 8089607 Dd703_2786 Dickeya dadantii Ech703 signal peptidase I YP_002988385.1 3254866 R 579405 CDS YP_002988386.1 242240205 8089608 complement(3255851..3257650) 1 NC_012880.1 TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: eca:ECA3280 GTP-binding protein LepA; GTP-binding protein LepA 3257650 8089608 Dd703_2787 Dickeya dadantii Ech703 GTP-binding protein LepA YP_002988386.1 3255851 R 579405 CDS YP_002988387.1 242240206 8089609 complement(3257929..3258396) 1 NC_012880.1 involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 3258396 8089609 Dd703_2788 Dickeya dadantii Ech703 SoxR reducing system protein RseC YP_002988387.1 3257929 R 579405 CDS YP_002988388.1 242240207 8089610 complement(3258393..3259349) 1 NC_012880.1 PFAM: MucB/RseB family protein; KEGG: spe:Spro_3674 periplasmic negative regulator of sigmaE; sigma E regulatory protein MucB/RseB 3259349 8089610 Dd703_2789 Dickeya dadantii Ech703 sigma E regulatory protein MucB/RseB YP_002988388.1 3258393 R 579405 CDS YP_002988389.1 242240208 8089611 complement(3259349..3260002) 1 NC_012880.1 PFAM: anti sigma-E protein RseA family protein; anti sigma-E protein RseA domain protein; KEGG: eca:ECA3283 anti-RNA polymerase sigma factor SigE; anti-RNA polymerase sigma factor SigE 3260002 8089611 Dd703_2790 Dickeya dadantii Ech703 anti-RNA polymerase sigma factor SigE YP_002988389.1 3259349 R 579405 CDS YP_002988390.1 242240209 8089612 complement(3260051..3260626) 1 NC_012880.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 3260626 8089612 Dd703_2791 Dickeya dadantii Ech703 RNA polymerase sigma factor RpoE YP_002988390.1 3260051 R 579405 CDS YP_002988391.1 242240210 8089613 3260990..3262609 1 NC_012880.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; KEGG: yen:YE1009 L-aspartate oxidase; L-aspartate oxidase 3262609 8089613 Dd703_2792 Dickeya dadantii Ech703 L-aspartate oxidase YP_002988391.1 3260990 D 579405 CDS YP_002988392.1 242240211 8089614 complement(3262640..3263386) 1 NC_012880.1 PFAM: methyltransferase small; KEGG: eca:ECA3286 hypothetical protein; methyltransferase small 3263386 8089614 Dd703_2793 Dickeya dadantii Ech703 methyltransferase small YP_002988392.1 3262640 R 579405 CDS YP_002988393.1 242240212 8089615 3263571..3264911 1 NC_012880.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 3264911 8089615 Dd703_2794 Dickeya dadantii Ech703 ATP-dependent RNA helicase SrmB YP_002988393.1 3263571 D 579405 CDS YP_002988394.1 242240213 8089616 complement(3265037..3265420) 1 NC_012880.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 3265420 8089616 Dd703_2795 Dickeya dadantii Ech703 autonomous glycyl radical cofactor GrcA YP_002988394.1 3265037 R 579405 CDS YP_002988395.1 242240214 8089617 3265793..3266479 1 NC_012880.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3266479 8089617 Dd703_2796 Dickeya dadantii Ech703 uracil-DNA glycosylase YP_002988395.1 3265793 D 579405 CDS YP_002988396.1 242240215 8089620 3267113..3268381 1 NC_012880.1 KEGG: pfl:PFL_0498 O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 3268381 8089620 Dd703_2797 Dickeya dadantii Ech703 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_002988396.1 3267113 D 579405 CDS YP_002988397.1 242240216 8089621 complement(3268439..3269857) 1 NC_012880.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3269857 gltX 8089621 gltX Dickeya dadantii Ech703 glutamyl-tRNA synthetase YP_002988397.1 3268439 R 579405 CDS YP_002988398.1 242240217 8089626 3270985..3271419 1 NC_012880.1 PFAM: DoxX family protein; KEGG: eca:ECA3295 hypothetical protein; DoxX family protein 3271419 8089626 Dd703_2799 Dickeya dadantii Ech703 DoxX family protein YP_002988398.1 3270985 D 579405 CDS YP_002988399.1 242240218 8089627 complement(3271476..3272468) 1 NC_012880.1 KEGG: eca:ECA3296 sulfate ABC transporter ATP-binding protein; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; sulfate ABC transporter ATPase 3272468 8089627 Dd703_2800 Dickeya dadantii Ech703 sulfate ABC transporter ATPase YP_002988399.1 3271476 R 579405 CDS YP_002988400.1 242240219 8089628 complement(3272458..3273342) 1 NC_012880.1 TIGRFAM: sulfate ABC transporter inner membrane subunit CysW; sulfate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3297 sulfate ABC transporter permease; sulfate ABC transporter permease 3273342 8089628 Dd703_2801 Dickeya dadantii Ech703 sulfate ABC transporter permease YP_002988400.1 3272458 R 579405 CDS YP_002988401.1 242240220 8089629 complement(3273352..3274164) 1 NC_012880.1 TIGRFAM: sulfate ABC transporter inner membrane subunit CysT; sulfate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3298 sulfate ABC transporter permease; sulfate ABC transporter permease 3274164 8089629 Dd703_2802 Dickeya dadantii Ech703 sulfate ABC transporter permease YP_002988401.1 3273352 R 579405 CDS YP_002988402.1 242240221 8089630 complement(3274264..3275274) 1 NC_012880.1 TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3299 sulfate-binding protein; sulfate ABC transporter substrate-binding protein 3275274 8089630 Dd703_2803 Dickeya dadantii Ech703 sulfate ABC transporter substrate-binding protein YP_002988402.1 3274264 R 579405 CDS YP_002988403.1 242240222 8089631 complement(3275637..3276794) 1 NC_012880.1 regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; carbohydrate diacid transcriptional activator CdaR 3276794 8089631 Dd703_2804 Dickeya dadantii Ech703 carbohydrate diacid transcriptional activator CdaR YP_002988403.1 3275637 R 579405 CDS YP_002988404.1 242240223 8089632 complement(3277076..3278506) 1 NC_012880.1 protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 3278506 8089632 Dd703_2805 Dickeya dadantii Ech703 serine endoprotease YP_002988404.1 3277076 R 579405 CDS YP_002988405.1 242240224 8089633 complement(3278841..3280355) 1 NC_012880.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 3280355 dgt 8089633 dgt Dickeya dadantii Ech703 deoxyguanosinetriphosphate triphosphohydrolase YP_002988405.1 3278841 R 579405 CDS YP_002988406.1 242240225 8089634 3280497..3281198 1 NC_012880.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3281198 8089634 Dd703_2807 Dickeya dadantii Ech703 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_002988406.1 3280497 D 579405 CDS YP_002988407.1 242240226 8089635 3281251..3282048 1 NC_012880.1 PFAM: periplasmic binding protein; KEGG: eca:ECA3304 vitamin B12-transporter protein BtuF; periplasmic binding protein 3282048 8089635 Dd703_2808 Dickeya dadantii Ech703 periplasmic binding protein YP_002988407.1 3281251 D 579405 CDS YP_002988408.1 242240227 8089636 complement(3282123..3282467) 1 NC_012880.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: spe:Spro_0783 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 3282467 8089636 Dd703_2809 Dickeya dadantii Ech703 iron-sulfur cluster assembly accessory protein YP_002988408.1 3282123 R 579405 CDS YP_002988409.1 242240228 8089637 complement(3282552..3283970) 1 NC_012880.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 3283970 8089637 Dd703_2810 Dickeya dadantii Ech703 chloride channel protein YP_002988409.1 3282552 R 579405 CDS YP_002988410.1 242240229 8089638 3284168..3285448 1 NC_012880.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3285448 8089638 Dd703_2811 Dickeya dadantii Ech703 glutamate-1-semialdehyde aminotransferase YP_002988410.1 3284168 D 579405 CDS YP_002988411.1 242240230 8089639 complement(3285643..3287661) 1 NC_012880.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 3287661 8089639 Dd703_2812 Dickeya dadantii Ech703 iron-hydroxamate transporter permease subunit YP_002988411.1 3285643 R 579405 CDS YP_002988412.1 242240231 8089640 complement(3287658..3288563) 1 NC_012880.1 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 3288563 8089640 Dd703_2813 Dickeya dadantii Ech703 iron-hydroxamate transporter substrate-binding subunit YP_002988412.1 3287658 R 579405 CDS YP_002988413.1 242240232 8089641 complement(3288566..3289363) 1 NC_012880.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 3289363 8089641 Dd703_2814 Dickeya dadantii Ech703 iron-hydroxamate transporter ATP-binding subunit YP_002988413.1 3288566 R 579405 CDS YP_002988414.1 242240233 8089642 complement(3289645..3292128) 1 NC_012880.1 bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b 3292128 mrcB 8089642 mrcB Dickeya dadantii Ech703 penicillin-binding protein 1b YP_002988414.1 3289645 R 579405 CDS YP_002988415.1 242240234 8089643 complement(3292517..3294955) 1 NC_012880.1 similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 3294955 8089643 Dd703_2816 Dickeya dadantii Ech703 ATP-dependent RNA helicase HrpB YP_002988415.1 3292517 R 579405 CDS YP_002988416.1 242240235 8089644 3295045..3295575 1 NC_012880.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: eca:ECA3315 2'-5' RNA ligase; 2'-5' RNA ligase 3295575 8089644 Dd703_2817 Dickeya dadantii Ech703 2'-5' RNA ligase YP_002988416.1 3295045 D 579405 CDS YP_002988417.1 242240236 8089645 3295587..3296306 1 NC_012880.1 TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; KEGG: eca:ECA3316 sugar fermentation stimulation protein A; sugar fermentation stimulation protein 3296306 8089645 Dd703_2818 Dickeya dadantii Ech703 sugar fermentation stimulation protein YP_002988417.1 3295587 D 579405 CDS YP_002988418.1 242240237 8089646 3296471..3296926 1 NC_012880.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: kpn:KPN_00145 DnaK transcriptional regulator DksA; RNA polymerase-binding transcription factor 3296926 dksA 8089646 dksA Dickeya dadantii Ech703 RNA polymerase-binding transcription factor YP_002988418.1 3296471 D 579405 CDS YP_002988419.1 242240238 8089647 3297023..3297931 1 NC_012880.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: esa:ESA_03196 glutamyl-Q tRNA(Asp) synthetase; glutamate--tRNA ligase 3297931 8089647 Dd703_2820 Dickeya dadantii Ech703 glutamate--tRNA ligase YP_002988419.1 3297023 D 579405 CDS YP_002988420.1 242240239 8089648 3298056..3299405 1 NC_012880.1 polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase I 3299405 pcnB 8089648 pcnB Dickeya dadantii Ech703 poly(A) polymerase I YP_002988420.1 3298056 D 579405 CDS YP_002988421.1 242240240 8089649 3299405..3299899 1 NC_012880.1 KEGG: eca:ECA3320 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3299899 8089649 Dd703_2822 Dickeya dadantii Ech703 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002988421.1 3299405 D 579405 CDS YP_002988422.1 242240241 8089650 3300005..3300799 1 NC_012880.1 KEGG: eca:ECA3321 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3300799 8089650 Dd703_2823 Dickeya dadantii Ech703 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002988422.1 3300005 D 579405 CDS YP_002988423.1 242240242 8089651 3300815..3301669 1 NC_012880.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3301669 panC 8089651 panC Dickeya dadantii Ech703 pantoate--beta-alanine ligase YP_002988423.1 3300815 D 579405 CDS YP_002988424.1 242240243 8089652 3301696..3302076 1 NC_012880.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3302076 8089652 Dd703_2825 Dickeya dadantii Ech703 aspartate alpha-decarboxylase YP_002988424.1 3301696 D 579405 CDS YP_002988425.1 242240244 8089653 complement(3302227..3302997) 1 NC_012880.1 PFAM: ABC transporter; KEGG: spe:Spro_3995 ABC-2 type transporter; ABC transporter 3302997 8089653 Dd703_2826 Dickeya dadantii Ech703 ABC transporter YP_002988425.1 3302227 R 579405 CDS YP_002988426.1 242240245 8089654 complement(3302994..3303914) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: yen:YE0715 ABC transporter ATP-binding protein; ABC transporter 3303914 8089654 Dd703_2827 Dickeya dadantii Ech703 ABC transporter YP_002988426.1 3302994 R 579405 CDS YP_002988427.1 242240246 8089655 3304041..3304679 1 NC_012880.1 catalyzes the interconversion of bicarbonate and carbon dioxide; carbonic anhydrase 3304679 8089655 Dd703_2828 Dickeya dadantii Ech703 carbonic anhydrase YP_002988427.1 3304041 D 579405 CDS YP_002988428.1 242240247 8089656 complement(3304749..3305282) 1 NC_012880.1 KEGG: eca:ECA3328 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 3305282 8089656 Dd703_2829 Dickeya dadantii Ech703 hypoxanthine phosphoribosyltransferase YP_002988428.1 3304749 R 579405 CDS YP_002988429.1 242240248 8089657 3305427..3305864 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3329 acetyltransferase; N-acetyltransferase GCN5 3305864 8089657 Dd703_2830 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988429.1 3305427 D 579405 CDS YP_002988430.1 242240249 8089658 3306024..3306350 1 NC_012880.1 KEGG: asa:ASA_3604 hypothetical protein; hypothetical protein 3306350 8089658 Dd703_2831 Dickeya dadantii Ech703 hypothetical protein YP_002988430.1 3306024 D 579405 CDS YP_002988431.1 242240250 8089659 3306399..3306788 1 NC_012880.1 KEGG: asa:ASA_3605 hypothetical protein; hypothetical protein 3306788 8089659 Dd703_2832 Dickeya dadantii Ech703 hypothetical protein YP_002988431.1 3306399 D 579405 CDS YP_002988432.1 242240251 8089660 complement(3306800..3307864) 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: eca:ECA3330 ATP transporter ATP-binding protein; ABC transporter 3307864 8089660 Dd703_2833 Dickeya dadantii Ech703 ABC transporter YP_002988432.1 3306800 R 579405 CDS YP_002988433.1 242240252 8089661 complement(3307872..3309434) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3331 ABC transporter permease; binding-protein-dependent transporters inner membrane component 3309434 8089661 Dd703_2834 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988433.1 3307872 R 579405 CDS YP_002988434.1 242240253 8089662 3309720..3310067 1 NC_012880.1 KEGG: eca:ECA3332 hypothetical protein; hypothetical protein 3310067 8089662 Dd703_2835 Dickeya dadantii Ech703 hypothetical protein YP_002988434.1 3309720 D 579405 CDS YP_002988435.1 242240254 8089663 3310176..3311039 1 NC_012880.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3311039 8089663 Dd703_2836 Dickeya dadantii Ech703 spermidine synthase YP_002988435.1 3310176 D 579405 CDS YP_002988436.1 242240255 8089664 3311070..3311864 1 NC_012880.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 3311864 8089664 Dd703_2837 Dickeya dadantii Ech703 S-adenosylmethionine decarboxylase YP_002988436.1 3311070 D 579405 CDS YP_002988437.1 242240256 8089666 complement(3312231..3312965) 1 NC_012880.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 3312965 8089666 Dd703_2838 Dickeya dadantii Ech703 DNA polymerase III subunit epsilon YP_002988437.1 3312231 R 579405 CDS YP_002988438.1 242240257 8089667 3313023..3313487 1 NC_012880.1 PFAM: ribonuclease H; KEGG: spe:Spro_0911 ribonuclease H; ribonuclease H 3313487 8089667 Dd703_2839 Dickeya dadantii Ech703 ribonuclease H YP_002988438.1 3313023 D 579405 CDS YP_002988439.1 242240258 8089668 complement(3313484..3314203) 1 NC_012880.1 PFAM: methyltransferase type 11; KEGG: spe:Spro_0910 methyltransferase type 11; type 11 methyltransferase 3314203 8089668 Dd703_2840 Dickeya dadantii Ech703 type 11 methyltransferase YP_002988439.1 3313484 R 579405 CDS YP_002988440.1 242240259 8089669 3314246..3314998 1 NC_012880.1 KEGG: eca:ECA3342 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 3314998 8089669 Dd703_2841 Dickeya dadantii Ech703 hydroxyacylglutathione hydrolase YP_002988440.1 3314246 D 579405 CDS YP_002988441.1 242240260 8089670 3315069..3316463 1 NC_012880.1 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D 3316463 mltD 8089670 mltD Dickeya dadantii Ech703 membrane-bound lytic murein transglycosylase D YP_002988441.1 3315069 D 579405 CDS YP_002988442.1 242240261 8089671 complement(3316807..3317118) 1 NC_012880.1 KEGG: spe:Spro_0361 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3317118 8089671 Dd703_2843 Dickeya dadantii Ech703 transposase IS3/IS911 family protein YP_002988442.1 3316807 R 579405 CDS YP_002988443.1 242240262 8089672 complement(3317190..3317957) 1 NC_012880.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: eca:ECA3344 hypothetical protein; hypothetical protein 3317957 8089672 Dd703_2844 Dickeya dadantii Ech703 hypothetical protein YP_002988443.1 3317190 R 579405 CDS YP_002988444.1 242240263 8089674 complement(3319035..3319325) 1 NC_012880.1 PFAM: transposase IS3/IS911 family protein; KEGG: spe:Spro_0361 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3319325 8089674 Dd703_2846 Dickeya dadantii Ech703 transposase IS3/IS911 family protein YP_002988444.1 3319035 R 579405 CDS YP_002988445.1 242240264 8089681 complement(3325323..3327896) 1 NC_012880.1 KEGG: eca:ECA3345 protein disaggregation chaperone; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; protein disaggregation chaperone 3327896 8089681 Dd703_2848 Dickeya dadantii Ech703 protein disaggregation chaperone YP_002988445.1 3325323 R 579405 CDS YP_002988446.1 242240265 8089682 complement(3328031..3328756) 1 NC_012880.1 PFAM: protein of unknown function DUF152; KEGG: eca:ECA3346 hypothetical protein; hypothetical protein 3328756 8089682 Dd703_2849 Dickeya dadantii Ech703 hypothetical protein YP_002988446.1 3328031 R 579405 CDS YP_002988447.1 242240266 8089683 complement(3328761..3329738) 1 NC_012880.1 KEGG: eca:ECA3347 23S rRNA pseudouridine synthase D; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 3329738 8089683 Dd703_2850 Dickeya dadantii Ech703 pseudouridine synthase YP_002988447.1 3328761 R 579405 CDS YP_002988448.1 242240267 8089684 3329873..3330604 1 NC_012880.1 with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO 3330604 8089684 Dd703_2851 Dickeya dadantii Ech703 outer membrane protein assembly complex subunit YfiO YP_002988448.1 3329873 D 579405 CDS YP_002988449.1 242240268 8089685 3330891..3331226 1 NC_012880.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: cko:CKO_03918 translation inhibitor protein RaiA; sigma 54 modulation protein/ribosomal protein S30EA 3331226 8089685 Dd703_2852 Dickeya dadantii Ech703 sigma 54 modulation protein/ribosomal protein S30EA YP_002988449.1 3330891 D 579405 CDS YP_002988450.1 242240269 8089686 3331457..3332638 1 NC_012880.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase 3332638 pheA 8089686 pheA Dickeya dadantii Ech703 bifunctional chorismate mutase/prephenate dehydratase YP_002988450.1 3331457 D 579405 CDS YP_002988451.1 242240270 8089687 complement(3332686..3333807) 1 NC_012880.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 3333807 tyrA 8089687 tyrA Dickeya dadantii Ech703 bifunctional chorismate mutase/prephenate dehydrogenase YP_002988451.1 3332686 R 579405 CDS YP_002988452.1 242240271 8089688 complement(3333819..3334883) 1 NC_012880.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3334883 8089688 Dd703_2855 Dickeya dadantii Ech703 phospho-2-dehydro-3-deoxyheptonate aldolase YP_002988452.1 3333819 R 579405 CDS YP_002988453.1 242240272 8089689 3335523..3335903 1 NC_012880.1 KEGG: eca:ECA3354 hypothetical protein; hypothetical protein 3335903 8089689 Dd703_2856 Dickeya dadantii Ech703 hypothetical protein YP_002988453.1 3335523 D 579405 CDS YP_002988454.1 242240273 8089690 complement(3336179..3336526) 1 NC_012880.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3336526 rplS 8089690 rplS Dickeya dadantii Ech703 50S ribosomal protein L19 YP_002988454.1 3336179 R 579405 CDS YP_002988455.1 242240274 8089691 complement(3336598..3337347) 1 NC_012880.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 3337347 trmD 8089691 trmD Dickeya dadantii Ech703 tRNA (guanine-N(1)-)-methyltransferase YP_002988455.1 3336598 R 579405 CDS YP_002988456.1 242240275 8089692 complement(3337386..3337934) 1 NC_012880.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3337934 rimM 8089692 rimM Dickeya dadantii Ech703 16S rRNA-processing protein RimM YP_002988456.1 3337386 R 579405 CDS YP_002988457.1 242240276 8089693 complement(3337953..3338201) 1 NC_012880.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: eca:ECA3359 30S ribosomal protein S16; 30S ribosomal protein S16 3338201 8089693 Dd703_2860 Dickeya dadantii Ech703 30S ribosomal protein S16 YP_002988457.1 3337953 R 579405 CDS YP_002988458.1 242240277 8089694 complement(3338360..3339721) 1 NC_012880.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 3339721 8089694 Dd703_2861 Dickeya dadantii Ech703 signal recognition particle protein YP_002988458.1 3338360 R 579405 CDS YP_002988459.1 242240278 8089695 3339888..3340682 1 NC_012880.1 PFAM: cytochrome C assembly protein; KEGG: eca:ECA3361 hypothetical protein; cytochrome C assembly protein 3340682 8089695 Dd703_2862 Dickeya dadantii Ech703 cytochrome C assembly protein YP_002988459.1 3339888 D 579405 CDS YP_002988460.1 242240279 8089696 complement(3340729..3342051) 1 NC_012880.1 PFAM: transposase IS4 family protein; KEGG: vha:VIBHAR_06534 hypothetical protein; transposase IS4 family protein 3342051 8089696 Dd703_2863 Dickeya dadantii Ech703 transposase IS4 family protein YP_002988460.1 3340729 R 579405 CDS YP_002988461.1 242240280 8089697 complement(3342194..3343486) 1 NC_012880.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: eca:ECA1161 ammonium transporter; ammonium transporter 3343486 8089697 Dd703_2864 Dickeya dadantii Ech703 ammonium transporter YP_002988461.1 3342194 R 579405 CDS YP_002988462.1 242240281 8089698 complement(3343529..3343867) 1 NC_012880.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 3343867 8089698 Dd703_2865 Dickeya dadantii Ech703 nitrogen regulatory protein P-II 2 YP_002988462.1 3343529 R 579405 CDS YP_002988463.1 242240282 8089699 complement(3344172..3345956) 1 NC_012880.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: spe:Spro_1108 multidrug transporter membrane\ATP-binding components; multidrug transporter membrane\ATP-binding components 3345956 8089699 Dd703_2866 Dickeya dadantii Ech703 multidrug transporter membrane\ATP-binding components YP_002988463.1 3344172 R 579405 CDS YP_002988464.1 242240283 8089700 complement(3345953..3347776) 1 NC_012880.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: eca:ECA1158 multidrug transporter membrane\ATP-binding components; multidrug transporter membrane\ATP-binding components 3347776 8089700 Dd703_2867 Dickeya dadantii Ech703 multidrug transporter membrane\ATP-binding components YP_002988464.1 3345953 R 579405 CDS YP_002988465.1 242240284 8089701 complement(3347804..3348265) 1 NC_012880.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA1157 transcription regulator AsnC; AsnC family transcriptional regulator 3348265 8089701 Dd703_2868 Dickeya dadantii Ech703 AsnC family transcriptional regulator YP_002988465.1 3347804 R 579405 CDS YP_002988466.1 242240285 8089702 3348386..3349462 1 NC_012880.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: eca:ECA1156 pyridoxal-phosphate dependent protein; pyridoxal-5'-phosphate-dependent protein subunit beta 3349462 8089702 Dd703_2869 Dickeya dadantii Ech703 pyridoxal-5'-phosphate-dependent protein subunit beta YP_002988466.1 3348386 D 579405 CDS YP_002988467.1 242240286 8089703 3349570..3350265 1 NC_012880.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: eca:ECA1155 queuosine biosynthesis protein QueC; exsB protein 3350265 8089703 Dd703_2870 Dickeya dadantii Ech703 exsB protein YP_002988467.1 3349570 D 579405 CDS YP_002988468.1 242240287 8089704 complement(3350380..3350748) 1 NC_012880.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: eca:ECA1153 hypothetical protein; competence protein ComEA 3350748 8089704 Dd703_2871 Dickeya dadantii Ech703 competence protein ComEA YP_002988468.1 3350380 R 579405 CDS YP_002988469.1 242240288 8089705 complement(3350887..3352767) 1 NC_012880.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eca:ECA1152 peptidyl-prolyl cis-trans isomerase (rotamase D); peptidyl-prolyl cis-trans isomerase D 3352767 8089705 Dd703_2872 Dickeya dadantii Ech703 peptidyl-prolyl cis-trans isomerase D YP_002988469.1 3350887 R 579405 CDS YP_002988470.1 242240289 8089706 complement(3353019..3353291) 1 NC_012880.1 histone-like DNA-binding protein; transcriptional regulator HU subunit beta 3353291 8089706 Dd703_2873 Dickeya dadantii Ech703 transcriptional regulator HU subunit beta YP_002988470.1 3353019 R 579405 CDS YP_002988471.1 242240290 8089707 complement(3353481..3355841) 1 NC_012880.1 KEGG: eca:ECA1150 DNA-binding ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16; ATPase AAA; DNA-binding ATP-dependent protease La 3355841 8089707 Dd703_2874 Dickeya dadantii Ech703 DNA-binding ATP-dependent protease La YP_002988471.1 3353481 R 579405 CDS YP_002988472.1 242240291 8089708 complement(3356031..3357305) 1 NC_012880.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 3357305 clpX 8089708 clpX Dickeya dadantii Ech703 ATP-dependent protease ATP-binding subunit ClpX YP_002988472.1 3356031 R 579405 CDS YP_002988473.1 242240292 8089709 complement(3357453..3358076) 1 NC_012880.1 KEGG: eca:ECA1148 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease proteolytic subunit ClpP 3358076 8089709 Dd703_2876 Dickeya dadantii Ech703 ATP-dependent Clp protease proteolytic subunit ClpP YP_002988473.1 3357453 R 579405 CDS YP_002988474.1 242240293 8089710 3358309..3358542 1 NC_012880.1 hypothetical protein 3358542 8089710 Dd703_2877 Dickeya dadantii Ech703 hypothetical protein YP_002988474.1 3358309 D 579405 CDS YP_002988475.1 242240294 8089711 complement(3358609..3359913) 1 NC_012880.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 3359913 tig 8089711 tig Dickeya dadantii Ech703 trigger factor YP_002988475.1 3358609 R 579405 CDS YP_002988476.1 242240295 8089712 complement(3360206..3360520) 1 NC_012880.1 PFAM: BolA family protein; KEGG: eca:ECA1146 transcriptional regulator BolA; BolA family protein 3360520 8089712 Dd703_2879 Dickeya dadantii Ech703 BolA family protein YP_002988476.1 3360206 R 579405 CDS YP_002988477.1 242240296 8089713 3360840..3361418 1 NC_012880.1 PFAM: Uncharacterized lipoprotein; KEGG: spe:Spro_1092 hypothetical protein; hypothetical protein 3361418 8089713 Dd703_2880 Dickeya dadantii Ech703 hypothetical protein YP_002988477.1 3360840 D 579405 CDS YP_002988478.1 242240297 8089714 3361473..3362942 1 NC_012880.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 3362942 ampG 8089714 ampG Dickeya dadantii Ech703 muropeptide transporter YP_002988478.1 3361473 D 579405 CDS YP_002988479.1 242240298 8089715 3363365..3364318 1 NC_012880.1 TIGRFAM: ubiquinol oxidase subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II; KEGG: eca:ECA1143 cytochrome o ubiquinol oxidase subunit II; cytochrome o ubiquinol oxidase subunit II 3364318 8089715 Dd703_2882 Dickeya dadantii Ech703 cytochrome o ubiquinol oxidase subunit II YP_002988479.1 3363365 D 579405 CDS YP_002988480.1 242240299 8089716 3364338..3366329 1 NC_012880.1 KEGG: eca:ECA1142 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 3366329 8089716 Dd703_2883 Dickeya dadantii Ech703 cytochrome o ubiquinol oxidase subunit I YP_002988480.1 3364338 D 579405 CDS YP_002988481.1 242240300 8089717 3366319..3366930 1 NC_012880.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: eca:ECA1141 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 3366930 8089717 Dd703_2884 Dickeya dadantii Ech703 cytochrome o ubiquinol oxidase subunit III YP_002988481.1 3366319 D 579405 CDS YP_002988482.1 242240301 8089718 3366930..3367262 1 NC_012880.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: eca:ECA1140 cytochrome o ubiquinol oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 3367262 8089718 Dd703_2885 Dickeya dadantii Ech703 cytochrome o ubiquinol oxidase subunit IV YP_002988482.1 3366930 D 579405 CDS YP_002988483.1 242240302 8089719 3367277..3368167 1 NC_012880.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 3368167 8089719 Dd703_2886 Dickeya dadantii Ech703 protoheme IX farnesyltransferase YP_002988483.1 3367277 D 579405 CDS YP_002988484.1 242240303 8089720 3368316..3369683 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA1138 transporter; major facilitator superfamily protein 3369683 8089720 Dd703_2887 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988484.1 3368316 D 579405 CDS YP_002988485.1 242240304 8089721 complement(3369789..3370280) 1 NC_012880.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 3370280 8089721 Dd703_2888 Dickeya dadantii Ech703 nucleotide-binding protein YP_002988485.1 3369789 R 579405 CDS YP_002988486.1 242240305 8089722 3370620..3371528 1 NC_012880.1 Ketopantoate reductase; catalyzes the NADPH reduction of Ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 3371528 8089722 Dd703_2889 Dickeya dadantii Ech703 2-dehydropantoate 2-reductase YP_002988486.1 3370620 D 579405 CDS YP_002988487.1 242240306 8089723 3371491..3372081 1 NC_012880.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA1135 hypothetical protein; DJ-1 family protein 3372081 8089723 Dd703_2890 Dickeya dadantii Ech703 DJ-1 family protein YP_002988487.1 3371491 D 579405 CDS YP_002988488.1 242240307 8089724 complement(3372142..3373590) 1 NC_012880.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 3373590 8089724 Dd703_2891 Dickeya dadantii Ech703 thiamine biosynthesis protein ThiI YP_002988488.1 3372142 R 579405 CDS YP_002988489.1 242240308 8089725 3373827..3374075 1 NC_012880.1 TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit; KEGG: eca:ECA1133 exodeoxyribonuclease VII small subunit; exodeoxyribonuclease VII small subunit 3374075 8089725 Dd703_2892 Dickeya dadantii Ech703 exodeoxyribonuclease VII small subunit YP_002988489.1 3373827 D 579405 CDS YP_002988490.1 242240309 8089726 3374072..3374983 1 NC_012880.1 PFAM: polyprenyl synthetase; KEGG: eca:ECA1132 geranyltranstransferase; geranyltranstransferase 3374983 8089726 Dd703_2893 Dickeya dadantii Ech703 geranyltranstransferase YP_002988490.1 3374072 D 579405 CDS YP_002988491.1 242240310 8089727 3375016..3376887 1 NC_012880.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 3376887 8089727 Dd703_2894 Dickeya dadantii Ech703 1-deoxy-D-xylulose-5-phosphate synthase YP_002988491.1 3375016 D 579405 CDS YP_002988492.1 242240311 8089728 complement(3376914..3377420) 1 NC_012880.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 3377420 8089728 Dd703_2895 Dickeya dadantii Ech703 phosphatidylglycerophosphatase A YP_002988492.1 3376914 R 579405 CDS YP_002988493.1 242240312 8089729 complement(3377410..3378384) 1 NC_012880.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3378384 8089729 Dd703_2896 Dickeya dadantii Ech703 thiamine monophosphate kinase YP_002988493.1 3377410 R 579405 CDS YP_002988494.1 242240313 8089730 complement(3378443..3378862) 1 NC_012880.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3378862 nusB 8089730 nusB Dickeya dadantii Ech703 transcription antitermination protein NusB YP_002988494.1 3378443 R 579405 CDS YP_002988495.1 242240314 8089731 complement(3378891..3379358) 1 NC_012880.1 KEGG: eca:ECA1127 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 3379358 8089731 Dd703_2898 Dickeya dadantii Ech703 6,7-dimethyl-8-ribityllumazine synthase YP_002988495.1 3378891 R 579405 CDS YP_002988496.1 242240315 8089732 complement(3379553..3380665) 1 NC_012880.1 KEGG: eca:ECA1126 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 3380665 8089732 Dd703_2899 Dickeya dadantii Ech703 riboflavin biosynthesis protein RibD YP_002988496.1 3379553 R 579405 CDS YP_002988497.1 242240316 8089733 complement(3380728..3381177) 1 NC_012880.1 PFAM: ATP-cone domain protein; KEGG: sgl:SG0650 transcriptional regulator NrdR; transcriptional regulator NrdR 3381177 nrdR 8089733 nrdR Dickeya dadantii Ech703 transcriptional regulator NrdR YP_002988497.1 3380728 R 579405 CDS YP_002988498.1 242240317 8089734 3381712..3384423 1 NC_012880.1 P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA 3384423 8089734 Dd703_2901 Dickeya dadantii Ech703 magnesium-transporting ATPase MgtA YP_002988498.1 3381712 D 579405 CDS YP_002988499.1 242240318 8089735 3384557..3385111 1 NC_012880.1 KEGG: eca:ECA1124 hypothetical protein; hypothetical protein 3385111 8089735 Dd703_2902 Dickeya dadantii Ech703 hypothetical protein YP_002988499.1 3384557 D 579405 CDS YP_002988500.1 242240319 8089736 complement(3385397..3386368) 1 NC_012880.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3386368 secF 8089736 secF Dickeya dadantii Ech703 preprotein translocase subunit SecF YP_002988500.1 3385397 R 579405 CDS YP_002988501.1 242240320 8089737 complement(3386379..3388193) 1 NC_012880.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3388193 secD 8089737 secD Dickeya dadantii Ech703 preprotein translocase subunit SecD YP_002988501.1 3386379 R 579405 CDS YP_002988502.1 242240321 8089738 complement(3388256..3388591) 1 NC_012880.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: eum:ECUMN_0445 SecYEG protein translocase auxillary subunit; preprotein translocase subunit YajC 3388591 8089738 Dd703_2905 Dickeya dadantii Ech703 preprotein translocase subunit YajC YP_002988502.1 3388256 R 579405 CDS YP_002988503.1 242240322 8089739 complement(3388690..3389853) 1 NC_012880.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3389853 tgt 8089739 tgt Dickeya dadantii Ech703 queuine tRNA-ribosyltransferase YP_002988503.1 3388690 R 579405 CDS YP_002988504.1 242240323 8089740 complement(3389963..3391051) 1 NC_012880.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 3391051 queA 8089740 queA Dickeya dadantii Ech703 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_002988504.1 3389963 R 579405 CDS YP_002988505.1 242240324 8089741 3391242..3391841 1 NC_012880.1 PFAM: protein of unknown function DUF479; KEGG: eca:ECA1118 hypothetical protein; ACP phosphodiesterase 3391841 8089741 Dd703_2908 Dickeya dadantii Ech703 ACP phosphodiesterase YP_002988505.1 3391242 D 579405 CDS YP_002988506.1 242240325 8089742 3392048..3392650 1 NC_012880.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: yen:YE3174 alkyl hydroperoxide reductase subunit C; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 3392650 8089742 Dd703_2909 Dickeya dadantii Ech703 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_002988506.1 3392048 D 579405 CDS YP_002988507.1 242240326 8089743 complement(3392777..3394156) 1 NC_012880.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; proline-specific permease 3394156 proY 8089743 proY Dickeya dadantii Ech703 proline-specific permease YP_002988507.1 3392777 R 579405 CDS YP_002988508.1 242240327 8089744 complement(3394235..3395554) 1 NC_012880.1 TIGRFAM: branched-chain amino acid transporter II carrier protein; PFAM: branched-chain amino acid transporter II carrier protein; KEGG: eca:ECA1114 branched-chain amino acid transporter II carrier protein; branched-chain amino acid transporter II carrier protein 3395554 8089744 Dd703_2911 Dickeya dadantii Ech703 branched-chain amino acid transporter II carrier protein YP_002988508.1 3394235 R 579405 CDS YP_002988509.1 242240328 8089745 complement(3396009..3397115) 1 NC_012880.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3397115 8089745 Dd703_2912 Dickeya dadantii Ech703 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_002988509.1 3396009 R 579405 CDS YP_002988510.1 242240329 8089746 complement(3397396..3398331) 1 NC_012880.1 TIGRFAM: phosphate binding protein; KEGG: eca:ECA1112 phosphate binding protein; phosphate binding protein 3398331 8089746 Dd703_2913 Dickeya dadantii Ech703 phosphate binding protein YP_002988510.1 3397396 R 579405 CDS YP_002988511.1 242240330 8089747 complement(3398432..3399754) 1 NC_012880.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 3399754 phoR 8089747 phoR Dickeya dadantii Ech703 phosphate regulon sensor protein YP_002988511.1 3398432 R 579405 CDS YP_002988512.1 242240331 8089748 complement(3399781..3400470) 1 NC_012880.1 KEGG: eca:ECA1110 phosphate regulon response regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator PhoB 3400470 8089748 Dd703_2915 Dickeya dadantii Ech703 winged helix family two component transcriptional regulator PhoB YP_002988512.1 3399781 R 579405 CDS YP_002988513.1 242240332 8089749 3400784..3402016 1 NC_012880.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: eca:ECA1109 exonuclease subunit SbcD; nuclease SbcCD subunit D 3402016 8089749 Dd703_2916 Dickeya dadantii Ech703 nuclease SbcCD subunit D YP_002988513.1 3400784 D 579405 CDS YP_002988514.1 242240333 8089750 3402013..3405696 1 NC_012880.1 PFAM: SMC domain protein; KEGG: eca:ECA1108 exonuclease; SMC domain-containing protein 3405696 8089750 Dd703_2917 Dickeya dadantii Ech703 SMC domain-containing protein YP_002988514.1 3402013 D 579405 CDS YP_002988515.1 242240334 8089751 complement(3405739..3406659) 1 NC_012880.1 PFAM: ROK family protein; KEGG: eca:ECA1107 fructokinase; ROK family protein 3406659 8089751 Dd703_2918 Dickeya dadantii Ech703 ROK family protein YP_002988515.1 3405739 R 579405 CDS YP_002988516.1 242240335 8089752 3406830..3407741 1 NC_012880.1 PFAM: exonuclease RdgC; KEGG: spe:Spro_1027 recombination associated protein; exonuclease RdgC 3407741 8089752 Dd703_2919 Dickeya dadantii Ech703 exonuclease RdgC YP_002988516.1 3406830 D 579405 CDS YP_002988517.1 242240336 8089753 complement(3407789..3409579) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1105 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 3409579 8089753 Dd703_2920 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_002988517.1 3407789 R 579405 CDS YP_002988518.1 242240337 8089754 complement(3410119..3410403) 1 NC_012880.1 PFAM: protein of unknown function DUF1255; KEGG: eca:ECA1104 hypothetical protein; hypothetical protein 3410403 8089754 Dd703_2921 Dickeya dadantii Ech703 hypothetical protein YP_002988518.1 3410119 R 579405 CDS YP_002988519.1 242240338 8089755 complement(3410528..3411049) 1 NC_012880.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 3411049 aroL 8089755 aroL Dickeya dadantii Ech703 shikimate kinase YP_002988519.1 3410528 R 579405 CDS YP_002988520.1 242240339 8089756 complement(3411046..3411348) 1 NC_012880.1 hypothetical protein 3411348 8089756 Dd703_2923 Dickeya dadantii Ech703 hypothetical protein YP_002988520.1 3411046 R 579405 CDS YP_002988521.1 242240340 8089757 complement(3411468..3412514) 1 NC_012880.1 KEGG: eca:ECA1102 L-asparaginase precursor; TIGRFAM: L-asparaginase, type II; PFAM: asparaginase/glutaminase; type II L-asparaginase 3412514 8089757 Dd703_2924 Dickeya dadantii Ech703 type II L-asparaginase YP_002988521.1 3411468 R 579405 CDS YP_002988522.1 242240341 8089758 complement(3412689..3414350) 1 NC_012880.1 efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane protein/ATP-binding component 3414350 8089758 Dd703_2925 Dickeya dadantii Ech703 multidrug transporter membrane protein/ATP-binding component YP_002988522.1 3412689 R 579405 CDS YP_002988523.1 242240342 8089759 complement(3414494..3415597) 1 NC_012880.1 PFAM: methionine synthase vitamin-B12 independent; KEGG: bsu:BSU38960 hypothetical protein; vitamin-B12 independent methionine synthase 3415597 8089759 Dd703_2926 Dickeya dadantii Ech703 vitamin-B12 independent methionine synthase YP_002988523.1 3414494 R 579405 CDS YP_002988524.1 242240343 8089760 3416154..3416825 1 NC_012880.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase; KEGG: spe:Spro_1624 HAD family hydrolase; HAD-superfamily hydrolase 3416825 8089760 Dd703_2927 Dickeya dadantii Ech703 HAD-superfamily hydrolase YP_002988524.1 3416154 D 579405 CDS YP_002988525.1 242240344 8089761 complement(3416831..3417760) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2075 LysR family transcriptional regulator; LysR family transcriptional regulator 3417760 8089761 Dd703_2928 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988525.1 3416831 R 579405 CDS YP_002988526.1 242240345 8089762 3417901..3419328 1 NC_012880.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eca:ECA2074 hypothetical protein; hypothetical protein 3419328 8089762 Dd703_2929 Dickeya dadantii Ech703 hypothetical protein YP_002988526.1 3417901 D 579405 CDS YP_002988527.1 242240346 8089763 3419325..3420602 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bpy:Bphyt_5120 major facilitator superfamily MFS_1; major facilitator superfamily protein 3420602 8089763 Dd703_2930 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988527.1 3419325 D 579405 CDS YP_002988528.1 242240347 8089764 complement(3420676..3421212) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0956 acetyltransferase; phosphinothricin acetyltransferase 3421212 8089764 Dd703_2931 Dickeya dadantii Ech703 phosphinothricin acetyltransferase YP_002988528.1 3420676 R 579405 CDS YP_002988529.1 242240348 8089765 complement(3421639..3421758) 1 NC_012880.1 hypothetical protein 3421758 8089765 Dd703_2932 Dickeya dadantii Ech703 hypothetical protein YP_002988529.1 3421639 R 579405 CDS YP_002988530.1 242240349 8089766 complement(3422016..3422663) 1 NC_012880.1 KEGG: eca:ECA3090 hypothetical protein; hypothetical protein 3422663 8089766 Dd703_2933 Dickeya dadantii Ech703 hypothetical protein YP_002988530.1 3422016 R 579405 CDS YP_002988531.1 242240350 8089767 3423195..3424427 1 NC_012880.1 PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: eca:ECA1089 hypothetical protein; protein serine/threonine phosphatase 3424427 8089767 Dd703_2934 Dickeya dadantii Ech703 protein serine/threonine phosphatase YP_002988531.1 3423195 D 579405 CDS YP_002988532.1 242240351 8089768 3424406..3425011 1 NC_012880.1 KEGG: eca:ECA1088 hypothetical protein; hypothetical protein 3425011 8089768 Dd703_2935 Dickeya dadantii Ech703 hypothetical protein YP_002988532.1 3424406 D 579405 CDS YP_002988533.1 242240352 8089769 3425014..3425433 1 NC_012880.1 KEGG: eca:ECA1087 lipoprotein; lipoprotein 3425433 8089769 Dd703_2936 Dickeya dadantii Ech703 lipoprotein YP_002988533.1 3425014 D 579405 CDS YP_002988534.1 242240353 8089770 3425439..3426164 1 NC_012880.1 KEGG: eca:ECA1086 signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3426164 8089770 Dd703_2937 Dickeya dadantii Ech703 diguanylate cyclase YP_002988534.1 3425439 D 579405 CDS YP_002988535.1 242240354 8089771 complement(3426180..3426521) 1 NC_012880.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: eca:ECA1082 phosphonoacetate hydrolase; alkylphosphonate utilization operon protein PhnA 3426521 8089771 Dd703_2938 Dickeya dadantii Ech703 alkylphosphonate utilization operon protein PhnA YP_002988535.1 3426180 R 579405 CDS YP_002988536.1 242240355 8089772 complement(3426604..3426732) 1 NC_012880.1 hypothetical protein 3426732 8089772 Dd703_2939 Dickeya dadantii Ech703 hypothetical protein YP_002988536.1 3426604 R 579405 CDS YP_002988537.1 242240356 8089773 3426826..3428094 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: mmw:Mmwyl1_3284 major facilitator transporter; major facilitator superfamily protein 3428094 8089773 Dd703_2940 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988537.1 3426826 D 579405 CDS YP_002988538.1 242240357 8089774 3428891..3430234 1 NC_012880.1 KEGG: eca:ECA1067 hypothetical protein; hypothetical protein 3430234 8089774 Dd703_2941 Dickeya dadantii Ech703 hypothetical protein YP_002988538.1 3428891 D 579405 CDS YP_002988539.1 242240358 8089775 3430431..3430814 1 NC_012880.1 KEGG: ent:Ent638_2896 hypothetical protein; hypothetical protein 3430814 8089775 Dd703_2942 Dickeya dadantii Ech703 hypothetical protein YP_002988539.1 3430431 D 579405 CDS YP_002988540.1 242240359 8089776 3430823..3431983 1 NC_012880.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: ecr:ECIAI1_4511 hypothetical protein; Relaxase/mobilization nuclease family protein 3431983 8089776 Dd703_2943 Dickeya dadantii Ech703 Relaxase/mobilization nuclease family protein YP_002988540.1 3430823 D 579405 CDS YP_002988541.1 242240360 8089777 3432515..3432901 1 NC_012880.1 KEGG: cko:CKO_03957 hypothetical protein; hypothetical protein 3432901 8089777 Dd703_2944 Dickeya dadantii Ech703 hypothetical protein YP_002988541.1 3432515 D 579405 CDS YP_002988542.1 242240361 8089778 3433394..3433588 1 NC_012880.1 hypothetical protein 3433588 8089778 Dd703_2945 Dickeya dadantii Ech703 hypothetical protein YP_002988542.1 3433394 D 579405 CDS YP_002988543.1 242240362 8089779 complement(3433574..3434095) 1 NC_012880.1 KEGG: yen:YE0987 inner membrane protein; hypothetical protein 3434095 8089779 Dd703_2946 Dickeya dadantii Ech703 hypothetical protein YP_002988543.1 3433574 R 579405 CDS YP_002988544.1 242240363 8089780 complement(3434400..3434828) 1 NC_012880.1 KEGG: cko:CKO_03959 hypothetical protein; hypothetical protein 3434828 8089780 Dd703_2947 Dickeya dadantii Ech703 hypothetical protein YP_002988544.1 3434400 R 579405 CDS YP_002988545.1 242240364 8089781 complement(3434931..3435314) 1 NC_012880.1 KEGG: cko:CKO_03960 hypothetical protein; hypothetical protein 3435314 8089781 Dd703_2948 Dickeya dadantii Ech703 hypothetical protein YP_002988545.1 3434931 R 579405 CDS YP_002988546.1 242240365 8089782 complement(3435298..3436956) 1 NC_012880.1 KEGG: cko:CKO_03961 hypothetical protein; hypothetical protein 3436956 8089782 Dd703_2949 Dickeya dadantii Ech703 hypothetical protein YP_002988546.1 3435298 R 579405 CDS YP_002988547.1 242240366 8089783 complement(3436962..3438317) 1 NC_012880.1 PFAM: integrase family protein; KEGG: cko:CKO_03962 hypothetical protein; integrase family protein 3438317 8089783 Dd703_2950 Dickeya dadantii Ech703 integrase family protein YP_002988547.1 3436962 R 579405 CDS YP_002988548.1 242240367 8089784 complement(3438268..3439491) 1 NC_012880.1 PFAM: integrase family protein; KEGG: ecr:ECIAI1_4503 integrase; integrase family protein 3439491 8089784 Dd703_2951 Dickeya dadantii Ech703 integrase family protein YP_002988548.1 3438268 R 579405 CDS YP_002988549.1 242240368 8089785 3439893..3440468 1 NC_012880.1 KEGG: bmu:Bmul_3996 hypothetical protein; hypothetical protein 3440468 8089785 Dd703_2952 Dickeya dadantii Ech703 hypothetical protein YP_002988549.1 3439893 D 579405 CDS YP_002988550.1 242240369 8089786 complement(3440502..3442349) 1 NC_012880.1 PFAM: UvrD/REP helicase; KEGG: sde:Sde_0195 UvrD/REP helicase family protein; UvrD/REP helicase 3442349 8089786 Dd703_2953 Dickeya dadantii Ech703 UvrD/REP helicase YP_002988550.1 3440502 R 579405 CDS YP_002988551.1 242240370 8089787 complement(3442349..3444328) 1 NC_012880.1 KEGG: ppr:PBPRC0043 exonuclease; exonuclease 3444328 8089787 Dd703_2954 Dickeya dadantii Ech703 exonuclease YP_002988551.1 3442349 R 579405 CDS YP_002988552.1 242240371 8089788 complement(3444331..3444975) 1 NC_012880.1 KEGG: eca:ECA1058 hypothetical protein; hypothetical protein 3444975 8089788 Dd703_2955 Dickeya dadantii Ech703 hypothetical protein YP_002988552.1 3444331 R 579405 CDS YP_002988553.1 242240372 8089789 complement(3444978..3446441) 1 NC_012880.1 PFAM: integrase family protein; KEGG: ecw:EcE24377A_3028 phage integrase family protein; integrase family protein 3446441 8089789 Dd703_2956 Dickeya dadantii Ech703 integrase family protein YP_002988553.1 3444978 R 579405 CDS YP_002988554.1 242240373 8089790 3446589..3449153 1 NC_012880.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3449153 8089790 Dd703_2957 Dickeya dadantii Ech703 DNA mismatch repair protein MutS YP_002988554.1 3446589 D 579405 CDS YP_002988555.1 242240374 8089791 complement(3449238..3449753) 1 NC_012880.1 KEGG: eca:ECA1052 lipoprotein involved with copper homeostasis and adhesion; hypothetical protein 3449753 8089791 Dd703_2958 Dickeya dadantii Ech703 hypothetical protein YP_002988555.1 3449238 R 579405 CDS YP_002988556.1 242240375 8089792 complement(3449808..3450362) 1 NC_012880.1 PFAM: YaeQ family protein; KEGG: eca:ECA1051 hypothetical protein; YaeQ family protein 3450362 8089792 Dd703_2959 Dickeya dadantii Ech703 YaeQ family protein YP_002988556.1 3449808 R 579405 CDS YP_002988557.1 242240376 8089793 3450660..3450860 1 NC_012880.1 PFAM: protein of unknown function UPF0253; KEGG: spe:Spro_3762 hypothetical protein; hypothetical protein 3450860 8089793 Dd703_2960 Dickeya dadantii Ech703 hypothetical protein YP_002988557.1 3450660 D 579405 CDS YP_002988558.1 242240377 8089794 3450847..3451107 1 NC_012880.1 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator 3451107 8089794 Dd703_2961 Dickeya dadantii Ech703 Rho-binding antiterminator YP_002988558.1 3450847 D 579405 CDS YP_002988559.1 242240378 8089795 complement(3451366..3452712) 1 NC_012880.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase 3452712 tilS 8089795 tilS Dickeya dadantii Ech703 tRNA(Ile)-lysidine synthetase YP_002988559.1 3451366 R 579405 CDS YP_002988560.1 242240379 8089796 complement(3452702..3453091) 1 NC_012880.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA1048 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3453091 8089796 Dd703_2963 Dickeya dadantii Ech703 glyoxalase/bleomycin resistance protein/dioxygenase YP_002988560.1 3452702 R 579405 CDS YP_002988561.1 242240380 8089797 complement(3453192..3454151) 1 NC_012880.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 3454151 8089797 Dd703_2964 Dickeya dadantii Ech703 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_002988561.1 3453192 R 579405 CDS YP_002988562.1 242240381 8089798 complement(3454164..3457646) 1 NC_012880.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3457646 dnaE 8089798 dnaE Dickeya dadantii Ech703 DNA polymerase III subunit alpha YP_002988562.1 3454164 R 579405 CDS YP_002988563.1 242240382 8089799 complement(3457713..3458309) 1 NC_012880.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3458309 rnhB 8089799 rnhB Dickeya dadantii Ech703 ribonuclease HII YP_002988563.1 3457713 R 579405 CDS YP_002988564.1 242240383 8089800 complement(3458306..3459454) 1 NC_012880.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3459454 lpxB 8089800 lpxB Dickeya dadantii Ech703 lipid-A-disaccharide synthase YP_002988564.1 3458306 R 579405 CDS YP_002988565.1 242240384 8089801 complement(3459458..3460246) 1 NC_012880.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3460246 8089801 Dd703_2968 Dickeya dadantii Ech703 UDP-N-acetylglucosamine acyltransferase YP_002988565.1 3459458 R 579405 CDS YP_002988566.1 242240385 8089802 complement(3460251..3460706) 1 NC_012880.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: pmr:PMI2274 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; 3-hydroxyacyl-ACP dehydratase 3460706 8089802 Dd703_2969 Dickeya dadantii Ech703 3-hydroxyacyl-ACP dehydratase YP_002988566.1 3460251 R 579405 CDS YP_002988567.1 242240386 8089803 complement(3460856..3461878) 1 NC_012880.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3461878 lpxD 8089803 lpxD Dickeya dadantii Ech703 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002988567.1 3460856 R 579405 CDS YP_002988568.1 242240387 8089804 complement(3461882..3462379) 1 NC_012880.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: eca:ECA1040 periplasmic chaperone; outer membrane chaperone Skp 3462379 8089804 Dd703_2971 Dickeya dadantii Ech703 outer membrane chaperone Skp YP_002988568.1 3461882 R 579405 CDS YP_002988569.1 242240388 8089805 complement(3462530..3464953) 1 NC_012880.1 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT 3464953 8089805 Dd703_2972 Dickeya dadantii Ech703 outer membrane protein assembly factor YaeT YP_002988569.1 3462530 R 579405 CDS YP_002988570.1 242240389 8089806 complement(3464988..3466343) 1 NC_012880.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP 3466343 8089806 Dd703_2973 Dickeya dadantii Ech703 zinc metallopeptidase RseP YP_002988570.1 3464988 R 579405 CDS YP_002988571.1 242240390 8089807 complement(3466366..3467223) 1 NC_012880.1 PFAM: phosphatidate cytidylyltransferase; KEGG: eca:ECA1037 CDP-diglyceride synthase; phosphatidate cytidylyltransferase 3467223 8089807 Dd703_2974 Dickeya dadantii Ech703 phosphatidate cytidylyltransferase YP_002988571.1 3466366 R 579405 CDS YP_002988572.1 242240391 8089808 complement(3467233..3467994) 1 NC_012880.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: eca:ECA1036 undecaprenyl pyrophosphate synthetase; UDP diphosphate synthase 3467994 8089808 Dd703_2975 Dickeya dadantii Ech703 UDP diphosphate synthase YP_002988572.1 3467233 R 579405 CDS YP_002988573.1 242240392 8089809 complement(3467984..3468166) 1 NC_012880.1 hypothetical protein 3468166 8089809 Dd703_2976 Dickeya dadantii Ech703 hypothetical protein YP_002988573.1 3467984 R 579405 CDS YP_002988574.1 242240393 8089810 complement(3468179..3469372) 1 NC_012880.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3469372 8089810 Dd703_2977 Dickeya dadantii Ech703 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002988574.1 3468179 R 579405 CDS YP_002988575.1 242240394 8089811 complement(3469569..3470126) 1 NC_012880.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3470126 frr 8089811 frr Dickeya dadantii Ech703 ribosome recycling factor YP_002988575.1 3469569 R 579405 CDS YP_002988576.1 242240395 8089812 complement(3470265..3470996) 1 NC_012880.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3470996 pyrH 8089812 pyrH Dickeya dadantii Ech703 uridylate kinase YP_002988576.1 3470265 R 579405 CDS YP_002988577.1 242240396 8089813 complement(3471140..3471997) 1 NC_012880.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3471997 tsf 8089813 tsf Dickeya dadantii Ech703 elongation factor Ts YP_002988577.1 3471140 R 579405 CDS YP_002988578.1 242240397 8089814 complement(3472110..3472835) 1 NC_012880.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 3472835 rpsB 8089814 rpsB Dickeya dadantii Ech703 30S ribosomal protein S2 YP_002988578.1 3472110 R 579405 CDS YP_002988579.1 242240398 8089815 3473210..3474004 1 NC_012880.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: eta:ETA_08880 methionine aminopeptidase; methionine aminopeptidase 3474004 8089815 Dd703_2982 Dickeya dadantii Ech703 methionine aminopeptidase YP_002988579.1 3473210 D 579405 CDS YP_002988580.1 242240399 8089816 3474120..3476792 1 NC_012880.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3476792 8089816 Dd703_2983 Dickeya dadantii Ech703 PII uridylyl-transferase YP_002988580.1 3474120 D 579405 CDS YP_002988581.1 242240400 8089817 3476890..3477714 1 NC_012880.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3477714 dapD 8089817 dapD Dickeya dadantii Ech703 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_002988581.1 3476890 D 579405 CDS YP_002988582.1 242240401 8089818 3477822..3478208 1 NC_012880.1 KEGG: eum:ECUMN_0161 hypothetical protein; hypothetical protein 3478208 8089818 Dd703_2985 Dickeya dadantii Ech703 hypothetical protein YP_002988582.1 3477822 D 579405 CDS YP_002988583.1 242240402 8089819 complement(3478275..3478724) 1 NC_012880.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 3478724 8089819 Dd703_2986 Dickeya dadantii Ech703 flavodoxin YP_002988583.1 3478275 R 579405 CDS YP_002988584.1 242240403 8089820 complement(3478743..3479528) 1 NC_012880.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 3479528 8089820 Dd703_2987 Dickeya dadantii Ech703 tRNA pseudouridine synthase C YP_002988584.1 3478743 R 579405 CDS YP_002988585.1 242240404 8089821 complement(3479533..3479856) 1 NC_012880.1 PFAM: protein of unknown function DUF446; KEGG: eca:ECA1024 hypothetical protein; hypothetical protein 3479856 8089821 Dd703_2988 Dickeya dadantii Ech703 hypothetical protein YP_002988585.1 3479533 R 579405 CDS YP_002988586.1 242240405 8089822 complement(3480490..3481038) 1 NC_012880.1 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 3481038 8089822 Dd703_2989 Dickeya dadantii Ech703 SecY interacting protein Syd YP_002988586.1 3480490 R 579405 CDS YP_002988587.1 242240406 8089823 3481304..3482677 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA1019 lysine decarboxylase family protein; hypothetical protein 3482677 8089823 Dd703_2990 Dickeya dadantii Ech703 hypothetical protein YP_002988587.1 3481304 D 579405 CDS YP_002988588.1 242240407 8089824 3482735..3483496 1 NC_012880.1 PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: eca:ECA1018 exonuclease IX; 5'-3' exonuclease 3483496 8089824 Dd703_2991 Dickeya dadantii Ech703 5'-3' exonuclease YP_002988588.1 3482735 D 579405 CDS YP_002988589.1 242240408 8089825 complement(3483502..3484602) 1 NC_012880.1 KEGG: eca:ECA1017 RNA 2'-O-ribose methyltransferase; RNA 2'-O-ribose methyltransferase 3484602 8089825 Dd703_2992 Dickeya dadantii Ech703 RNA 2'-O-ribose methyltransferase YP_002988589.1 3483502 R 579405 CDS YP_002988590.1 242240409 8089826 complement(3484604..3484990) 1 NC_012880.1 PFAM: protein of unknown function DUF423; KEGG: eca:ECA1016 hypothetical protein; hypothetical protein 3484990 8089826 Dd703_2993 Dickeya dadantii Ech703 hypothetical protein YP_002988590.1 3484604 R 579405 CDS YP_002988591.1 242240410 8089827 complement(3485032..3485958) 1 NC_012880.1 glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 3485958 8089827 Dd703_2994 Dickeya dadantii Ech703 DNA-binding transcriptional activator GcvA YP_002988591.1 3485032 R 579405 CDS YP_002988592.1 242240411 8089828 complement(3486302..3486523) 1 NC_012880.1 PFAM: protein of unknown function DUF903; KEGG: eca:ECA1013 lipoprotein; hypothetical protein 3486523 8089828 Dd703_2995 Dickeya dadantii Ech703 hypothetical protein YP_002988592.1 3486302 R 579405 CDS YP_002988593.1 242240412 8089829 3486697..3487902 1 NC_012880.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: eca:ECA1012 cysteine sulfinate desulfinase; cysteine sulfinate desulfinase 3487902 8089829 Dd703_2996 Dickeya dadantii Ech703 cysteine sulfinate desulfinase YP_002988593.1 3486697 D 579405 CDS YP_002988594.1 242240413 8089830 3487907..3488350 1 NC_012880.1 TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE; KEGG: eca:ECA1011 Fe-S metabolism associated protein; cysteine desulfurase, sulfur acceptor subunit CsdE 3488350 8089830 Dd703_2997 Dickeya dadantii Ech703 cysteine desulfurase, sulfur acceptor subunit CsdE YP_002988594.1 3487907 D 579405 CDS YP_002988595.1 242240414 8089831 complement(3488537..3489364) 1 NC_012880.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eca:ECA1010 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 3489364 8089831 Dd703_2998 Dickeya dadantii Ech703 UBA/THIF-type NAD/FAD binding protein YP_002988595.1 3488537 R 579405 CDS YP_002988596.1 242240415 8089832 3489558..3490025 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: swd:Swoo_4463 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3490025 8089832 Dd703_2999 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988596.1 3489558 D 579405 CDS YP_002988597.1 242240416 8089833 3490022..3491002 1 NC_012880.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: asa:ASA_0954 D-3-phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3491002 8089833 Dd703_3000 Dickeya dadantii Ech703 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_002988597.1 3490022 D 579405 CDS YP_002988598.1 242240417 8089834 3491038..3491517 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_0582 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3491517 8089834 Dd703_3001 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988598.1 3491038 D 579405 CDS YP_002988599.1 242240418 8089835 3491574..3492080 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_1266 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3492080 8089835 Dd703_3002 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988599.1 3491574 D 579405 CDS YP_002988600.1 242240419 8089836 complement(3492129..3493244) 1 NC_012880.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A 3493244 mltA 8089836 mltA Dickeya dadantii Ech703 murein transglycosylase A YP_002988600.1 3492129 R 579405 CDS YP_002988601.1 242240420 8089839 complement(3493855..3495096) 1 NC_012880.1 KEGG: eca:ECA1000 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 3495096 8089839 Dd703_3004 Dickeya dadantii Ech703 N-acetylmuramoyl-L-alanine amidase YP_002988601.1 3493855 R 579405 CDS YP_002988602.1 242240421 8089840 3495398..3496723 1 NC_012880.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 3496723 8089840 Dd703_3005 Dickeya dadantii Ech703 N-acetylglutamate synthase YP_002988602.1 3495398 D 579405 CDS YP_002988603.1 242240422 8089841 complement(3496810..3498660) 1 NC_012880.1 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha 3498660 recD 8089841 recD Dickeya dadantii Ech703 exonuclease V subunit alpha YP_002988603.1 3496810 R 579405 CDS YP_002988604.1 242240423 8089842 complement(3498653..3502222) 1 NC_012880.1 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta 3502222 recB 8089842 recB Dickeya dadantii Ech703 exonuclease V subunit beta YP_002988604.1 3498653 R 579405 CDS YP_002988605.1 242240424 8089843 complement(3502219..3505164) 1 NC_012880.1 PFAM: peptidase M16 domain protein; KEGG: eca:ECA0994 protease III precursor; pitrilysin 3505164 8089843 Dd703_3008 Dickeya dadantii Ech703 pitrilysin YP_002988605.1 3502219 R 579405 CDS YP_002988606.1 242240425 8089844 complement(3505320..3508706) 1 NC_012880.1 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma 3508706 recC 8089844 recC Dickeya dadantii Ech703 exonuclease V subunit gamma YP_002988606.1 3505320 R 579405 CDS YP_002988607.1 242240426 8089845 complement(3508727..3509122) 1 NC_012880.1 KEGG: eca:ECA0992 prepilin peptidase dependent protein c precursor; hypothetical protein 3509122 8089845 Dd703_3010 Dickeya dadantii Ech703 hypothetical protein YP_002988607.1 3508727 R 579405 CDS YP_002988608.1 242240427 8089846 complement(3509106..3509555) 1 NC_012880.1 KEGG: eca:ECA0991 hypothetical protein; hypothetical protein 3509555 8089846 Dd703_3011 Dickeya dadantii Ech703 hypothetical protein YP_002988608.1 3509106 R 579405 CDS YP_002988609.1 242240428 8089847 complement(3509545..3510132) 1 NC_012880.1 KEGG: eca:ECA0990 hypothetical protein; hypothetical protein 3510132 8089847 Dd703_3012 Dickeya dadantii Ech703 hypothetical protein YP_002988609.1 3509545 R 579405 CDS YP_002988610.1 242240429 8089848 complement(3510126..3510617) 1 NC_012880.1 KEGG: eca:ECA0989 hypothetical protein; hypothetical protein 3510617 8089848 Dd703_3013 Dickeya dadantii Ech703 hypothetical protein YP_002988610.1 3510126 R 579405 CDS YP_002988611.1 242240430 8089849 complement(3510867..3511661) 1 NC_012880.1 KEGG: spe:Spro_3821 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 3511661 8089849 Dd703_3014 Dickeya dadantii Ech703 thymidylate synthase YP_002988611.1 3510867 R 579405 CDS YP_002988612.1 242240431 8089850 complement(3511696..3512559) 1 NC_012880.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3512559 8089850 Dd703_3015 Dickeya dadantii Ech703 prolipoprotein diacylglyceryl transferase YP_002988612.1 3511696 R 579405 CDS YP_002988613.1 242240432 8089851 complement(3512717..3514963) 1 NC_012880.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain 3514963 8089851 Dd703_3016 Dickeya dadantii Ech703 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain YP_002988613.1 3512717 R 579405 CDS YP_002988614.1 242240433 8089852 complement(3514975..3515502) 1 NC_012880.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3515502 8089852 Dd703_3017 Dickeya dadantii Ech703 dinucleoside polyphosphate hydrolase YP_002988614.1 3514975 R 579405 CDS YP_002988615.1 242240434 8089854 3516197..3516883 1 NC_012880.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 3516883 8089854 Dd703_3019 Dickeya dadantii Ech703 DNA mismatch repair protein YP_002988615.1 3516197 D 579405 CDS YP_002988616.1 242240435 8089855 3516963..3517679 1 NC_012880.1 PFAM: integral membrane protein TerC; KEGG: eca:ECA0983 hypothetical protein; integral membrane protein TerC 3517679 8089855 Dd703_3020 Dickeya dadantii Ech703 integral membrane protein TerC YP_002988616.1 3516963 D 579405 CDS YP_002988617.1 242240436 8089856 3517831..3518049 1 NC_012880.1 PFAM: protein of unknown function DUF903; KEGG: eca:ECA0982 lipoprotein; hypothetical protein 3518049 8089856 Dd703_3021 Dickeya dadantii Ech703 hypothetical protein YP_002988617.1 3517831 D 579405 CDS YP_002988618.1 242240437 8089857 3518180..3519220 1 NC_012880.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo-keto reductase 3519220 tas 8089857 tas Dickeya dadantii Ech703 aldo-keto reductase YP_002988618.1 3518180 D 579405 CDS YP_002988619.1 242240438 8089858 complement(3519545..3520276) 1 NC_012880.1 KEGG: eca:ECA0979 hypothetical protein; hypothetical protein 3520276 8089858 Dd703_3023 Dickeya dadantii Ech703 hypothetical protein YP_002988619.1 3519545 R 579405 CDS YP_002988620.1 242240439 8089859 complement(3520339..3520683) 1 NC_012880.1 PFAM: protein of unknown function DUF469; KEGG: eca:ECA0978 hypothetical protein; hypothetical protein 3520683 8089859 Dd703_3024 Dickeya dadantii Ech703 hypothetical protein YP_002988620.1 3520339 R 579405 CDS YP_002988621.1 242240440 8089860 complement(3520683..3521402) 1 NC_012880.1 KEGG: eca:ECA0977 tRNA (guanine-N(7))-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 3521402 8089860 Dd703_3025 Dickeya dadantii Ech703 tRNA (guanine-N(7)-)-methyltransferase YP_002988621.1 3520683 R 579405 CDS YP_002988622.1 242240441 8089861 3521563..3522654 1 NC_012880.1 KEGG: eca:ECA0976 adenine DNA glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; adenine DNA glycosylase 3522654 8089861 Dd703_3026 Dickeya dadantii Ech703 adenine DNA glycosylase YP_002988622.1 3521563 D 579405 CDS YP_002988623.1 242240442 8089862 3522651..3522923 1 NC_012880.1 PFAM: Fe(II) trafficking protein YggX; KEGG: cko:CKO_04337 hypothetical protein; Fe(II) trafficking protein YggX 3522923 8089862 Dd703_3027 Dickeya dadantii Ech703 Fe(II) trafficking protein YggX YP_002988623.1 3522651 D 579405 CDS YP_002988624.1 242240443 8089863 3522978..3524060 1 NC_012880.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 3524060 mltC 8089863 mltC Dickeya dadantii Ech703 murein transglycosylase C YP_002988624.1 3522978 D 579405 CDS YP_002988625.1 242240444 8089864 complement(3524169..3524999) 1 NC_012880.1 KEGG: yen:YE0199 hypothetical protein; hypothetical protein 3524999 8089864 Dd703_3029 Dickeya dadantii Ech703 hypothetical protein YP_002988625.1 3524169 R 579405 CDS YP_002988626.1 242240445 8089865 complement(3525010..3526224) 1 NC_012880.1 PFAM: protein of unknown function UPF0261; KEGG: eca:ECA0970 hypothetical protein; hypothetical protein 3526224 8089865 Dd703_3030 Dickeya dadantii Ech703 hypothetical protein YP_002988626.1 3525010 R 579405 CDS YP_002988627.1 242240446 8089866 3526512..3527129 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: eca:ECA0969 TetR family transcriptional regulator; TetR family transcriptional regulator 3527129 8089866 Dd703_3031 Dickeya dadantii Ech703 TetR family transcriptional regulator YP_002988627.1 3526512 D 579405 CDS YP_002988628.1 242240447 8089867 3527470..3528927 1 NC_012880.1 PFAM: amino acid permease-associated region; KEGG: ypy:YPK_2256 amino acid permease-associated region; amino acid permease-associated protein 3528927 8089867 Dd703_3032 Dickeya dadantii Ech703 amino acid permease-associated protein YP_002988628.1 3527470 D 579405 CDS YP_002988629.1 242240448 8089868 complement(3529017..3531170) 1 NC_012880.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: eca:ECA0967 ornithine decarboxylase; ornithine decarboxylase 3531170 8089868 Dd703_3033 Dickeya dadantii Ech703 ornithine decarboxylase YP_002988629.1 3529017 R 579405 CDS YP_002988630.1 242240449 8089870 3532001..3533260 1 NC_012880.1 PFAM: integrase family protein; KEGG: stt:t4371 bacteriophage integrase; integrase family protein 3533260 8089870 Dd703_3034 Dickeya dadantii Ech703 integrase family protein YP_002988630.1 3532001 D 579405 CDS YP_002988631.1 242240450 8089871 complement(3533368..3533562) 1 NC_012880.1 KEGG: ecc:c1442 hypothetical protein; hypothetical protein 3533562 8089871 Dd703_3035 Dickeya dadantii Ech703 hypothetical protein YP_002988631.1 3533368 R 579405 CDS YP_002988632.1 242240451 8089872 3533748..3534089 1 NC_012880.1 KEGG: yen:YE1926 hypothetical protein; hypothetical protein 3534089 8089872 Dd703_3036 Dickeya dadantii Ech703 hypothetical protein YP_002988632.1 3533748 D 579405 CDS YP_002988633.1 242240452 8089873 3534265..3534882 1 NC_012880.1 KEGG: ypm:YP_pCRY21 hypothetical protein; hypothetical protein 3534882 8089873 Dd703_3037 Dickeya dadantii Ech703 hypothetical protein YP_002988633.1 3534265 D 579405 CDS YP_002988634.1 242240453 8089874 3534978..3535721 1 NC_012880.1 KEGG: eum:ECUMN_2300 MobC mobilization protein; MobC mobilization protein 3535721 8089874 Dd703_3038 Dickeya dadantii Ech703 MobC mobilization protein YP_002988634.1 3534978 D 579405 CDS YP_002988635.1 242240454 8089875 3535780..3535998 1 NC_012880.1 PFAM: Post-segregation antitoxin CcdA; KEGG: eca:ECA0511 plasmid maintenance protein CcdA; plasmid maintenance protein CcdA 3535998 8089875 Dd703_3039 Dickeya dadantii Ech703 plasmid maintenance protein CcdA YP_002988635.1 3535780 D 579405 CDS YP_002988636.1 242240455 8089876 3536001..3536306 1 NC_012880.1 controlled cell death protein; post-segregation toxin; toxin addiction system; plasmid maintenance protein CcdB 3536306 8089876 Dd703_3040 Dickeya dadantii Ech703 plasmid maintenance protein CcdB YP_002988636.1 3536001 D 579405 CDS YP_002988637.1 242240456 8089877 complement(3536433..3537692) 1 NC_012880.1 KEGG: asa:ASA_P4G176 hypothetical protein; hypothetical protein 3537692 8089877 Dd703_3041 Dickeya dadantii Ech703 hypothetical protein YP_002988637.1 3536433 R 579405 CDS YP_002988638.1 242240457 8089878 complement(3537694..3539703) 1 NC_012880.1 SMART: DEAD-like helicase; KEGG: asa:ASA_P4G175 hypothetical protein; DEAD/DEAH box helicase 3539703 8089878 Dd703_3042 Dickeya dadantii Ech703 DEAD/DEAH box helicase YP_002988638.1 3537694 R 579405 CDS YP_002988639.1 242240458 8089879 complement(3539696..3542311) 1 NC_012880.1 KEGG: asa:ASA_P4G174 hypothetical protein; hypothetical protein 3542311 8089879 Dd703_3043 Dickeya dadantii Ech703 hypothetical protein YP_002988639.1 3539696 R 579405 CDS YP_002988640.1 242240459 8089881 3542567..3543136 1 NC_012880.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ecf:ECH74115_0302 DNA-invertase; resolvase 3543136 8089881 Dd703_3045 Dickeya dadantii Ech703 resolvase YP_002988640.1 3542567 D 579405 CDS YP_002988641.1 242240460 8089882 complement(3543250..3546234) 1 NC_012880.1 PFAM: type III restriction protein res subunit; KEGG: cja:CJA_1582 type III restriction system endonuclease; type III site-specific deoxyribonuclease 3546234 8089882 Dd703_3046 Dickeya dadantii Ech703 type III site-specific deoxyribonuclease YP_002988641.1 3543250 R 579405 CDS YP_002988642.1 242240461 8089883 complement(3546234..3548216) 1 NC_012880.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bpt:Bpet4236 type III restriction system methylase; adenine-specific DNA-methyltransferase 3548216 8089883 Dd703_3047 Dickeya dadantii Ech703 adenine-specific DNA-methyltransferase YP_002988642.1 3546234 R 579405 CDS YP_002988643.1 242240462 8089884 complement(3548469..3549593) 1 NC_012880.1 PFAM: integrase family protein; KEGG: eca:ECA0546 shufflon-specific DNA recombinase; integrase family protein 3549593 8089884 Dd703_3048 Dickeya dadantii Ech703 integrase family protein YP_002988643.1 3548469 R 579405 CDS YP_002988644.1 242240463 8089885 complement(3549711..3549935) 1 NC_012880.1 KEGG: eca:ECA0958 hypothetical protein; hypothetical protein 3549935 8089885 Dd703_3049 Dickeya dadantii Ech703 hypothetical protein YP_002988644.1 3549711 R 579405 CDS YP_002988645.1 242240464 8089887 complement(3551393..3552829) 1 NC_012880.1 PFAM: protein of unknown function DUF1528; KEGG: spq:SPAB_05448 hypothetical protein; hypothetical protein 3552829 8089887 Dd703_3051 Dickeya dadantii Ech703 hypothetical protein YP_002988645.1 3551393 R 579405 CDS YP_002988646.1 242240465 8089888 3552922..3553554 1 NC_012880.1 KEGG: yen:YE3457 hypothetical protein; hypothetical protein 3553554 8089888 Dd703_3052 Dickeya dadantii Ech703 hypothetical protein YP_002988646.1 3552922 D 579405 CDS YP_002988647.1 242240466 8089889 3553679..3554011 1 NC_012880.1 KEGG: spq:SPAB_05446 hypothetical protein; hypothetical protein 3554011 8089889 Dd703_3053 Dickeya dadantii Ech703 hypothetical protein YP_002988647.1 3553679 D 579405 CDS YP_002988648.1 242240467 8089891 complement(3554574..3556646) 1 NC_012880.1 PFAM: carbamoyltransferase; KEGG: mlo:mlr6171 nodulation protein NolO; carbamoyltransferase 3556646 8089891 Dd703_3055 Dickeya dadantii Ech703 carbamoyltransferase YP_002988648.1 3554574 R 579405 CDS YP_002988649.1 242240468 8089892 complement(3556672..3560604) 1 NC_012880.1 with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; enterobactin synthase subunit F 3560604 entF 8089892 entF Dickeya dadantii Ech703 enterobactin synthase subunit F YP_002988649.1 3556672 R 579405 CDS YP_002988650.1 242240469 8089893 complement(3560691..3560834) 1 NC_012880.1 KEGG: spe:Spro_3428 MbtH domain-containing protein; MbtH domain-containing protein 3560834 8089893 Dd703_3057 Dickeya dadantii Ech703 MbtH domain-containing protein YP_002988650.1 3560691 R 579405 CDS YP_002988651.1 242240470 8089894 3561268..3561474 1 NC_012880.1 PFAM: MbtH domain protein; KEGG: pae:PA2412 hypothetical protein; MbtH domain-containing protein 3561474 8089894 Dd703_3058 Dickeya dadantii Ech703 MbtH domain-containing protein YP_002988651.1 3561268 D 579405 CDS YP_002988652.1 242240471 8089895 3561621..3564092 1 NC_012880.1 PFAM: peptidase S45 penicillin amidase; KEGG: rme:Rmet_1578 peptidase S45, penicillin amidase; peptidase S45 penicillin amidase 3564092 8089895 Dd703_3059 Dickeya dadantii Ech703 peptidase S45 penicillin amidase YP_002988652.1 3561621 D 579405 CDS YP_002988653.1 242240472 8089896 3564094..3565824 1 NC_012880.1 KEGG: nmu:Nmul_A1823 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter; SMART: ATPase AAA; cyclic peptide transporter 3565824 8089896 Dd703_3060 Dickeya dadantii Ech703 cyclic peptide transporter YP_002988653.1 3564094 D 579405 CDS YP_002988654.1 242240473 8089897 complement(3565895..3566950) 1 NC_012880.1 PFAM: beta-lactamase; KEGG: gsu:GSU1378 beta-lactamase; beta-lactamase 3566950 8089897 Dd703_3061 Dickeya dadantii Ech703 beta-lactamase YP_002988654.1 3565895 R 579405 CDS YP_002988655.1 242240474 8089898 complement(3566947..3568551) 1 NC_012880.1 KEGG: rso:RS03728 hypothetical protein; hypothetical protein 3568551 8089898 Dd703_3062 Dickeya dadantii Ech703 hypothetical protein YP_002988655.1 3566947 R 579405 CDS YP_002988656.1 242240475 8089899 complement(3568619..3573331) 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: bbt:BBta_6812 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase module; amino acid adenylation protein 3573331 8089899 Dd703_3063 Dickeya dadantii Ech703 amino acid adenylation protein YP_002988656.1 3568619 R 579405 CDS YP_002988657.1 242240476 8089900 complement(3573328..3574677) 1 NC_012880.1 PFAM: aminotransferase class I and II; KEGG: plu:plu1105 hypothetical protein; GntR family transcriptional regulator 3574677 8089900 Dd703_3064 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002988657.1 3573328 R 579405 CDS YP_002988658.1 242240477 8089901 complement(3574693..3575199) 1 NC_012880.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: plu:plu1104 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3575199 8089901 Dd703_3065 Dickeya dadantii Ech703 glyoxalase/bleomycin resistance protein/dioxygenase YP_002988658.1 3574693 R 579405 CDS YP_002988659.1 242240478 8089902 complement(3575272..3588723) 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; methyltransferase type 11; MCP methyltransferase CheR-type; Luciferase-like monooxygenase; methyltransferase type 12; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase; chemotaxis protein CheR 3588723 8089902 Dd703_3066 Dickeya dadantii Ech703 chemotaxis protein CheR YP_002988659.1 3575272 R 579405 CDS YP_002988660.1 242240479 8089903 complement(3588742..3589968) 1 NC_012880.1 PFAM: Luciferase-like monooxygenase; KEGG: bam:Bamb_6477 short-chain dehydrogenase/reductase SDR; luciferase-like monooxygenase 3589968 8089903 Dd703_3067 Dickeya dadantii Ech703 luciferase-like monooxygenase YP_002988660.1 3588742 R 579405 CDS YP_002988661.1 242240480 8089904 complement(3589965..3591812) 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: pen:PSEEN1815 peptide synthase; AMP-dependent synthetase and ligase 3591812 8089904 Dd703_3068 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002988661.1 3589965 R 579405 CDS YP_002988662.1 242240481 8089905 complement(3591805..3592857) 1 NC_012880.1 KEGG: bja:bll2235 hypothetical protein; hypothetical protein 3592857 8089905 Dd703_3069 Dickeya dadantii Ech703 hypothetical protein YP_002988662.1 3591805 R 579405 CDS YP_002988663.1 242240482 8089906 complement(3592886..3596512) 1 NC_012880.1 PFAM: beta-ketoacyl synthase ; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bte:BTH_I2363 polyketide synthase; 6-deoxyerythronolide-B synthase 3596512 8089906 Dd703_3070 Dickeya dadantii Ech703 6-deoxyerythronolide-B synthase YP_002988663.1 3592886 R 579405 CDS YP_002988664.1 242240483 8089907 complement(3596509..3606384) 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; methyltransferase FkbM family; PFAM: AMP-dependent synthetase and ligase; methyltransferase type 11; methyltransferase type 12; phosphopantetheine-binding; condensation domain protein; KEGG: nmu:Nmul_A1829 amino acid adenylation; amino acid adenylation protein 3606384 8089907 Dd703_3071 Dickeya dadantii Ech703 amino acid adenylation protein YP_002988664.1 3596509 R 579405 CDS YP_002988665.1 242240484 8089908 complement(3606391..3608445) 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: scl:sce8262 non-ribosomal peptide synthetase; AMP-dependent synthetase and ligase 3608445 8089908 Dd703_3072 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002988665.1 3606391 R 579405 CDS YP_002988666.1 242240485 8089909 3608851..3610017 1 NC_012880.1 KEGG: hch:HCH_04105 ATPase; ATPase 3610017 8089909 Dd703_3073 Dickeya dadantii Ech703 ATPase YP_002988666.1 3608851 D 579405 CDS YP_002988667.1 242240486 8089910 3610224..3611834 1 NC_012880.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E 3611834 entE 8089910 entE Dickeya dadantii Ech703 enterobactin synthase subunit E YP_002988667.1 3610224 D 579405 CDS YP_002988668.1 242240487 8089911 3611858..3612709 1 NC_012880.1 PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: esa:ESA_00798 hypothetical protein; isochorismatase 3612709 8089911 Dd703_3075 Dickeya dadantii Ech703 isochorismatase YP_002988668.1 3611858 D 579405 CDS YP_002988669.1 242240488 8089912 3612709..3613470 1 NC_012880.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase 3613470 8089912 Dd703_3076 Dickeya dadantii Ech703 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_002988669.1 3612709 D 579405 CDS YP_002988670.1 242240489 8089913 3613620..3613889 1 NC_012880.1 KEGG: yen:YE3464 hypothetical protein; hypothetical protein 3613889 8089913 Dd703_3077 Dickeya dadantii Ech703 hypothetical protein YP_002988670.1 3613620 D 579405 CDS YP_002988671.1 242240490 8089914 3613964..3615166 1 NC_012880.1 PFAM: transposase mutator type; KEGG: yen:YEP0069 transposase; transposase mutator type 3615166 8089914 Dd703_3078 Dickeya dadantii Ech703 transposase mutator type YP_002988671.1 3613964 D 579405 CDS YP_002988672.1 242240491 8089917 complement(3616514..3616780) 1 NC_012880.1 PFAM: transposase IS3/IS911 family protein; KEGG: yen:YE1123 IS1400 transposase A; transposase IS3/IS911 family protein 3616780 8089917 Dd703_3081 Dickeya dadantii Ech703 transposase IS3/IS911 family protein YP_002988672.1 3616514 R 579405 CDS YP_002988673.1 242240492 8089919 complement(3617046..3617339) 1 NC_012880.1 PFAM: protein of unknown function DUF1778; KEGG: eca:ECA0958 hypothetical protein; hypothetical protein 3617339 8089919 Dd703_3083 Dickeya dadantii Ech703 hypothetical protein YP_002988673.1 3617046 R 579405 CDS YP_002988674.1 242240493 8089920 complement(3617835..3618887) 1 NC_012880.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: mlo:mll9373 acyl-CoA-6-aminopenicillanic acid acyltransferase; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 3618887 8089920 Dd703_3084 Dickeya dadantii Ech703 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_002988674.1 3617835 R 579405 CDS YP_002988675.1 242240494 8089921 complement(3618884..3619498) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4244 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3619498 8089921 Dd703_3085 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988675.1 3618884 R 579405 CDS YP_002988676.1 242240495 8089922 complement(3619501..3619785) 1 NC_012880.1 hypothetical protein 3619785 8089922 Dd703_3086 Dickeya dadantii Ech703 hypothetical protein YP_002988676.1 3619501 R 579405 CDS YP_002988677.1 242240496 8089923 complement(3619775..3621292) 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sdn:Sden_3736 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3621292 8089923 Dd703_3087 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002988677.1 3619775 R 579405 CDS YP_002988678.1 242240497 8089924 complement(3621289..3624543) 1 NC_012880.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Non-ribosomal peptide synthetase; condensation domain protein; KEGG: pen:PSEEN2716 non-ribosomal peptide synthetase; amino acid adenylation protein 3624543 8089924 Dd703_3088 Dickeya dadantii Ech703 amino acid adenylation protein YP_002988678.1 3621289 R 579405 CDS YP_002988679.1 242240498 8089925 complement(3624540..3626789) 1 NC_012880.1 PFAM: tRNA synthetase class I (M); Cupin 2 conserved barrel domain protein; KEGG: mlo:mlr5926 tRNA synthetase; methionine--tRNA ligase 3626789 8089925 Dd703_3089 Dickeya dadantii Ech703 methionine--tRNA ligase YP_002988679.1 3624540 R 579405 CDS YP_002988680.1 242240499 8089926 complement(3626802..3627842) 1 NC_012880.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_0282 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3627842 8089926 Dd703_3090 Dickeya dadantii Ech703 FAD dependent oxidoreductase YP_002988680.1 3626802 R 579405 CDS YP_002988681.1 242240500 8089927 complement(3627874..3629238) 1 NC_012880.1 KEGG: mlo:mlr5923 lysine:N6-hydroxylase; L-lysine 6-monooxygenase 3629238 8089927 Dd703_3091 Dickeya dadantii Ech703 L-lysine 6-monooxygenase YP_002988681.1 3627874 R 579405 CDS YP_002988682.1 242240501 8089928 complement(3629298..3630566) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: afw:Anae109_4401 major facilitator transporter; major facilitator superfamily protein 3630566 8089928 Dd703_3092 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988682.1 3629298 R 579405 CDS YP_002988683.1 242240502 8089929 complement(3630559..3631881) 1 NC_012880.1 KEGG: plu:plu0116 hypothetical protein; hypothetical protein 3631881 8089929 Dd703_3093 Dickeya dadantii Ech703 hypothetical protein YP_002988683.1 3630559 R 579405 CDS YP_002988684.1 242240503 8089930 complement(3631891..3633039) 1 NC_012880.1 KEGG: bcj:BCAM2153 cytochrome P450 oxidoreductase; cytochrome P450 oxidoreductase 3633039 8089930 Dd703_3094 Dickeya dadantii Ech703 cytochrome P450 oxidoreductase YP_002988684.1 3631891 R 579405 CDS YP_002988685.1 242240504 8089931 complement(3633036..3634229) 1 NC_012880.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3176 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein 3634229 8089931 Dd703_3095 Dickeya dadantii Ech703 acyl-CoA dehydrogenase domain-containing protein YP_002988685.1 3633036 R 579405 CDS YP_002988686.1 242240505 8089932 complement(3634262..3636451) 1 NC_012880.1 KEGG: bpy:Bphyt_0257 hypothetical protein; hypothetical protein 3636451 8089932 Dd703_3096 Dickeya dadantii Ech703 hypothetical protein YP_002988686.1 3634262 R 579405 CDS YP_002988687.1 242240506 8089933 complement(3636451..3637377) 1 NC_012880.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: ppu:PP_3787 hypothetical protein; 3-oxoacyl-ACP synthase 3637377 8089933 Dd703_3097 Dickeya dadantii Ech703 3-oxoacyl-ACP synthase YP_002988687.1 3636451 R 579405 CDS YP_002988688.1 242240507 8088395 complement(3637371..3638237) 1 NC_012880.1 KEGG: bch:Bcen2424_4919 PEP phosphonomutase; PEP phosphonomutase 3638237 8088395 Dd703_3098 Dickeya dadantii Ech703 PEP phosphonomutase YP_002988688.1 3637371 R 579405 CDS YP_002988689.1 242240508 8088396 complement(3638261..3639043) 1 NC_012880.1 PFAM: thioesterase; KEGG: pen:PSEEN2139 thioesterase; thioesterase 3639043 8088396 Dd703_3099 Dickeya dadantii Ech703 thioesterase YP_002988689.1 3638261 R 579405 CDS YP_002988690.1 242240509 8088397 complement(3639551..3640729) 1 NC_012880.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: ses:SARI_00502 hypothetical protein; acyl-CoA dehydrogenase type 2 domain-containing protein 3640729 8088397 Dd703_3100 Dickeya dadantii Ech703 acyl-CoA dehydrogenase type 2 domain-containing protein YP_002988690.1 3639551 R 579405 CDS YP_002988691.1 242240510 8088398 3641014..3641706 1 NC_012880.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA1084 hypothetical protein; hypothetical protein 3641706 8088398 Dd703_3101 Dickeya dadantii Ech703 hypothetical protein YP_002988691.1 3641014 D 579405 CDS YP_002988692.1 242240511 8088399 complement(3641710..3642606) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1085 LysR family transcriptional regulator; LysR family transcriptional regulator 3642606 8088399 Dd703_3102 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988692.1 3641710 R 579405 CDS YP_002988693.1 242240512 8088401 3643359..3643577 1 NC_012880.1 PFAM: Post-segregation antitoxin CcdA; KEGG: eca:ECA0511 plasmid maintenance protein CcdA; plasmid maintenance protein CcdA 3643577 8088401 Dd703_3104 Dickeya dadantii Ech703 plasmid maintenance protein CcdA YP_002988693.1 3643359 D 579405 CDS YP_002988694.1 242240513 8088402 3643580..3643885 1 NC_012880.1 controlled cell death protein; post-segregation toxin; toxin addiction system; plasmid maintenance protein CcdB 3643885 8088402 Dd703_3105 Dickeya dadantii Ech703 plasmid maintenance protein CcdB YP_002988694.1 3643580 D 579405 CDS YP_002988695.1 242240514 8088403 complement(3644021..3645292) 1 NC_012880.1 PFAM: alanine racemase domain protein; KEGG: pol:Bpro_0661 D-serine deaminase; alanine racemase domain-containing protein 3645292 8088403 Dd703_3106 Dickeya dadantii Ech703 alanine racemase domain-containing protein YP_002988695.1 3644021 R 579405 CDS YP_002988696.1 242240515 8088404 complement(3645304..3646041) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bph:Bphy_6680 ABC transporter; ABC transporter 3646041 8088404 Dd703_3107 Dickeya dadantii Ech703 ABC transporter YP_002988696.1 3645304 R 579405 CDS YP_002988697.1 242240516 8088405 complement(3646038..3646682) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6679 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease 3646682 8088405 Dd703_3108 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002988697.1 3646038 R 579405 CDS YP_002988698.1 242240517 8088406 complement(3646679..3647416) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6678 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease 3647416 8088406 Dd703_3109 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002988698.1 3646679 R 579405 CDS YP_002988699.1 242240518 8088407 complement(3647467..3648303) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bph:Bphy_6677 extracellular solute-binding protein; family 3 extracellular solute-binding protein 3648303 8088407 Dd703_3110 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002988699.1 3647467 R 579405 CDS YP_002988700.1 242240519 8088408 complement(3648438..3648830) 1 NC_012880.1 PFAM: endoribonuclease L-PSP; KEGG: csa:Csal_0090 endoribonuclease L-PSP; endoribonuclease L-PSP 3648830 8088408 Dd703_3111 Dickeya dadantii Ech703 endoribonuclease L-PSP YP_002988700.1 3648438 R 579405 CDS YP_002988701.1 242240520 8088409 3649223..3649975 1 NC_012880.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bph:Bphy_6681 IclR family transcriptional regulator; IclR family transcriptional regulator 3649975 8088409 Dd703_3112 Dickeya dadantii Ech703 IclR family transcriptional regulator YP_002988701.1 3649223 D 579405 CDS YP_002988702.1 242240521 8088410 3650423..3651244 1 NC_012880.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: dal:Dalk_3686 methyltransferase type 11; type 11 methyltransferase 3651244 8088410 Dd703_3113 Dickeya dadantii Ech703 type 11 methyltransferase YP_002988702.1 3650423 D 579405 CDS YP_002988703.1 242240522 8088411 3651367..3651795 1 NC_012880.1 KEGG: aha:AHA_1727 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase; arsenate reductase 3651795 8088411 Dd703_3114 Dickeya dadantii Ech703 arsenate reductase YP_002988703.1 3651367 D 579405 CDS YP_002988704.1 242240523 8088412 3652324..3653040 1 NC_012880.1 PFAM: protein of unknown function DUF81; KEGG: eca:ECA1084 hypothetical protein; hypothetical protein 3653040 8088412 Dd703_3115 Dickeya dadantii Ech703 hypothetical protein YP_002988704.1 3652324 D 579405 CDS YP_002988705.1 242240524 8088414 complement(3653214..3654266) 1 NC_012880.1 TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: see:SNSL254_A2186 arsenic resistance protein; arsenic resistance protein 3654266 8088414 Dd703_3117 Dickeya dadantii Ech703 arsenic resistance protein YP_002988705.1 3653214 R 579405 CDS YP_002988706.1 242240525 8088416 complement(3654806..3655180) 1 NC_012880.1 PFAM: regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: sea:SeAg_B2124 arsenic resistance transcriptional regulator; transcriptional regulator TrmB 3655180 8088416 Dd703_3119 Dickeya dadantii Ech703 transcriptional regulator TrmB YP_002988706.1 3654806 R 579405 CDS YP_002988707.1 242240526 8088417 3656001..3657674 1 NC_012880.1 KEGG: aha:AHA_3686 histidine kinase-response regulator hybrid protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3657674 8088417 Dd703_3120 Dickeya dadantii Ech703 PAS/PAC sensor-containing diguanylate cyclase YP_002988707.1 3656001 D 579405 CDS YP_002988708.1 242240527 8088418 3658108..3658365 1 NC_012880.1 hypothetical protein 3658365 8088418 Dd703_3121 Dickeya dadantii Ech703 hypothetical protein YP_002988708.1 3658108 D 579405 CDS YP_002988709.1 242240528 8088419 complement(3658489..3660144) 1 NC_012880.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 3660144 mdoD 8088419 mdoD Dickeya dadantii Ech703 glucan biosynthesis protein D YP_002988709.1 3658489 R 579405 CDS YP_002988710.1 242240529 8088420 complement(3660336..3661274) 1 NC_012880.1 KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 3661274 8088420 Dd703_3123 Dickeya dadantii Ech703 response regulator receiver modulated diguanylate cyclase YP_002988710.1 3660336 R 579405 CDS YP_002988711.1 242240530 8088421 complement(3661255..3665379) 1 NC_012880.1 KEGG: psb:Psyr_2940 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; CHASE domain protein; PAS fold-3 domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein; multi-sensor hybrid histidine kinase 3665379 8088421 Dd703_3124 Dickeya dadantii Ech703 multi-sensor hybrid histidine kinase YP_002988711.1 3661255 R 579405 CDS YP_002988712.1 242240531 8088422 complement(3665835..3666812) 1 NC_012880.1 PFAM: ApbE family lipoprotein; KEGG: ent:Ent638_2557 ApbE family lipoprotein; ApbE family lipoprotein 3666812 8088422 Dd703_3125 Dickeya dadantii Ech703 ApbE family lipoprotein YP_002988712.1 3665835 R 579405 CDS YP_002988713.1 242240532 8088423 complement(3666886..3669663) 1 NC_012880.1 TIGRFAM: flavocytochrome C; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; NADH:flavin oxidoreductase/NADH oxidase; KEGG: ent:Ent638_2558 flavocytochrome C; flavocytochrome C 3669663 8088423 Dd703_3126 Dickeya dadantii Ech703 flavocytochrome C YP_002988713.1 3666886 R 579405 CDS YP_002988714.1 242240533 8088424 complement(3670387..3671934) 1 NC_012880.1 KEGG: eta:ETA_30660 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 3671934 8088424 Dd703_3127 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_002988714.1 3670387 R 579405 CDS YP_002988715.1 242240534 8088425 complement(3672360..3672752) 1 NC_012880.1 PFAM: helix-turn-helix HxlR type; KEGG: ccs:CCNA_03479 MarR family transcriptional regulator; HxlR family transcriptional regulator 3672752 8088425 Dd703_3128 Dickeya dadantii Ech703 HxlR family transcriptional regulator YP_002988715.1 3672360 R 579405 CDS YP_002988716.1 242240535 8088426 complement(3672891..3675956) 1 NC_012880.1 PFAM: acriflavin resistance protein; type II secretion system protein I/J; KEGG: kpe:KPK_2668 RND transporter hydrophobe/amphiphile efflux-1 (HAE1) family; acriflavin resistance protein 3675956 8088426 Dd703_3129 Dickeya dadantii Ech703 acriflavin resistance protein YP_002988716.1 3672891 R 579405 CDS YP_002988717.1 242240536 8088427 complement(3675956..3677089) 1 NC_012880.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: bbt:BBta_0809 hypothetical protein; RND family efflux transporter MFP subunit 3677089 8088427 Dd703_3130 Dickeya dadantii Ech703 RND family efflux transporter MFP subunit YP_002988717.1 3675956 R 579405 CDS YP_002988718.1 242240537 8088429 complement(3677402..3678610) 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: esa:ESA_pESA3p05442 hypothetical protein; histidine kinase 3678610 8088429 Dd703_3132 Dickeya dadantii Ech703 histidine kinase YP_002988718.1 3677402 R 579405 CDS YP_002988719.1 242240538 8088430 complement(3678607..3679302) 1 NC_012880.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: kpe:KPK_2665 DNA-binding response regulator; winged helix family two component transcriptional regulator 3679302 8088430 Dd703_3133 Dickeya dadantii Ech703 winged helix family two component transcriptional regulator YP_002988719.1 3678607 R 579405 CDS YP_002988720.1 242240539 8088431 3679466..3680245 1 NC_012880.1 PFAM: MltA-interacting MipA family protein; KEGG: esa:ESA_pESA3p05440 hypothetical protein; MltA-interacting MipA family protein 3680245 8088431 Dd703_3134 Dickeya dadantii Ech703 MltA-interacting MipA family protein YP_002988720.1 3679466 D 579405 CDS YP_002988721.1 242240540 8088432 3680594..3681358 1 NC_012880.1 PFAM: HpcH/HpaI aldolase; KEGG: pap:PSPA7_3089 4-hydroxy-2-oxovalerate aldolase; HpcH/HpaI aldolase 3681358 8088432 Dd703_3135 Dickeya dadantii Ech703 HpcH/HpaI aldolase YP_002988721.1 3680594 D 579405 CDS YP_002988722.1 242240541 8088433 3681396..3682562 1 NC_012880.1 KEGG: xcv:XCV3307 siderophore biosynthesis protein; siderophore biosynthesis protein 3682562 8088433 Dd703_3136 Dickeya dadantii Ech703 siderophore biosynthesis protein YP_002988722.1 3681396 D 579405 CDS YP_002988723.1 242240542 8088434 3682562..3684274 1 NC_012880.1 PFAM: IucA/IucC family protein; KEGG: pap:PSPA7_3092 IucA/IucC; IucA/IucC family protein 3684274 8088434 Dd703_3137 Dickeya dadantii Ech703 IucA/IucC family protein YP_002988723.1 3682562 D 579405 CDS YP_002988724.1 242240543 8088435 3684274..3685431 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: xac:XAC3179 transporter; major facilitator superfamily protein 3685431 8088435 Dd703_3138 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988724.1 3684274 D 579405 CDS YP_002988725.1 242240544 8088436 3685406..3687166 1 NC_012880.1 PFAM: IucA/IucC family protein; KEGG: swp:swp_0088 AcsD; IucA/IucC family protein 3687166 8088436 Dd703_3139 Dickeya dadantii Ech703 IucA/IucC family protein YP_002988725.1 3685406 D 579405 CDS YP_002988726.1 242240545 8088437 3687163..3688341 1 NC_012880.1 PFAM: Orn/DAP/Arg decarboxylase 2; alanine racemase domain protein; KEGG: xca:xccb100_1140 diaminopimelate decarboxylase; Orn/DAP/Arg decarboxylase 2 3688341 8088437 Dd703_3140 Dickeya dadantii Ech703 Orn/DAP/Arg decarboxylase 2 YP_002988726.1 3687163 D 579405 CDS YP_002988727.1 242240546 8088438 3688531..3689646 1 NC_012880.1 PFAM: periplasmic binding protein; KEGG: yen:YE0555 iron transporter; periplasmic binding protein 3689646 8088438 Dd703_3141 Dickeya dadantii Ech703 periplasmic binding protein YP_002988727.1 3688531 D 579405 CDS YP_002988728.1 242240547 8088439 complement(3689755..3691821) 1 NC_012880.1 TIGRFAM: TonB-dependent siderophore receptor; outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pap:PSPA7_3090 ferric vibrioferrin receptor; TonB-dependent siderophore receptor 3691821 8088439 Dd703_3142 Dickeya dadantii Ech703 TonB-dependent siderophore receptor YP_002988728.1 3689755 R 579405 CDS YP_002988729.1 242240548 8088440 3692144..3692989 1 NC_012880.1 PFAM: iron permease FTR1; KEGG: spe:Spro_2929 iron permease FTR1; iron permease FTR1 3692989 8088440 Dd703_3143 Dickeya dadantii Ech703 iron permease FTR1 YP_002988729.1 3692144 D 579405 CDS YP_002988730.1 242240549 8088441 3693008..3694132 1 NC_012880.1 KEGG: spe:Spro_2928 hypothetical protein; hypothetical protein 3694132 8088441 Dd703_3144 Dickeya dadantii Ech703 hypothetical protein YP_002988730.1 3693008 D 579405 CDS YP_002988731.1 242240550 8088442 3694144..3695439 1 NC_012880.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: spe:Spro_2927 Dyp-type peroxidase family protein; dyp-type peroxidase family protein 3695439 8088442 Dd703_3145 Dickeya dadantii Ech703 dyp-type peroxidase family protein YP_002988731.1 3694144 D 579405 CDS YP_002988732.1 242240551 8088443 complement(3695555..3695848) 1 NC_012880.1 KEGG: eca:ECA1998 hypothetical protein; hypothetical protein 3695848 8088443 Dd703_3146 Dickeya dadantii Ech703 hypothetical protein YP_002988732.1 3695555 R 579405 CDS YP_002988733.1 242240552 8088444 complement(3696544..3697371) 1 NC_012880.1 KEGG: aha:AHA_3054 hypothetical protein; hypothetical protein 3697371 8088444 Dd703_3147 Dickeya dadantii Ech703 hypothetical protein YP_002988733.1 3696544 R 579405 CDS YP_002988734.1 242240553 8088445 3697678..3698400 1 NC_012880.1 PFAM: protein of unknown function DUF81; KEGG: mms:mma_1887 hypothetical protein; hypothetical protein 3698400 8088445 Dd703_3148 Dickeya dadantii Ech703 hypothetical protein YP_002988734.1 3697678 D 579405 CDS YP_002988735.1 242240554 8088446 complement(3698397..3698840) 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: bha:BH1893 hypothetical protein; NUDIX hydrolase 3698840 8088446 Dd703_3149 Dickeya dadantii Ech703 NUDIX hydrolase YP_002988735.1 3698397 R 579405 CDS YP_002988736.1 242240555 8088447 complement(3698898..3699791) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB1011 LysR family transcriptional regulator; LysR family transcriptional regulator 3699791 8088447 Dd703_3150 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988736.1 3698898 R 579405 CDS YP_002988737.1 242240556 8088448 complement(3699846..3701771) 1 NC_012880.1 PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: eta:ETA_29240 phosphotransferase system mannitol/fructose-specific IIA domain; PTS modulated transcriptional regulator MtlR family 3701771 8088448 Dd703_3151 Dickeya dadantii Ech703 PTS modulated transcriptional regulator MtlR family YP_002988737.1 3699846 R 579405 CDS YP_002988738.1 242240557 8088449 complement(3701881..3702621) 1 NC_012880.1 PFAM: protein of unknown function DUF1341; KEGG: ent:Ent638_0431 hypothetical protein; hypothetical protein 3702621 8088449 Dd703_3152 Dickeya dadantii Ech703 hypothetical protein YP_002988738.1 3701881 R 579405 CDS YP_002988739.1 242240558 8088450 complement(3702618..3703739) 1 NC_012880.1 TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: L-seryl-tRNA selenium transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: eta:ETA_29260 selenocysteine synthase; pyridoxal phosphate-dependent enzyme 3703739 8088450 Dd703_3153 Dickeya dadantii Ech703 pyridoxal phosphate-dependent enzyme YP_002988739.1 3702618 R 579405 CDS YP_002988740.1 242240559 8088451 complement(3703723..3704856) 1 NC_012880.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 3704856 8088451 Dd703_3154 Dickeya dadantii Ech703 dihydroorotase YP_002988740.1 3703723 R 579405 CDS YP_002988741.1 242240560 8088452 complement(3704897..3705544) 1 NC_012880.1 KEGG: kpn:KPN_04637 inner membrane protein; inner membrane protein 3705544 8088452 Dd703_3155 Dickeya dadantii Ech703 inner membrane protein YP_002988741.1 3704897 R 579405 CDS YP_002988742.1 242240561 8088453 complement(3705558..3706334) 1 NC_012880.1 KEGG: spe:Spro_4378 hypothetical protein; hypothetical protein 3706334 8088453 Dd703_3156 Dickeya dadantii Ech703 hypothetical protein YP_002988742.1 3705558 R 579405 CDS YP_002988743.1 242240562 8088454 complement(3706399..3706698) 1 NC_012880.1 KEGG: yen:YE3784 hypothetical protein; hypothetical protein 3706698 8088454 Dd703_3157 Dickeya dadantii Ech703 hypothetical protein YP_002988743.1 3706399 R 579405 CDS YP_002988744.1 242240563 8088455 complement(3706701..3707057) 1 NC_012880.1 KEGG: eta:ETA_29320 hypothetical protein; hypothetical protein 3707057 8088455 Dd703_3158 Dickeya dadantii Ech703 hypothetical protein YP_002988744.1 3706701 R 579405 CDS YP_002988745.1 242240564 8088456 complement(3707098..3707454) 1 NC_012880.1 PFAM: PRD domain protein; KEGG: stm:STM4440 cytoplasmic protein; PRD domain-containing protein 3707454 8088456 Dd703_3159 Dickeya dadantii Ech703 PRD domain-containing protein YP_002988745.1 3707098 R 579405 CDS YP_002988746.1 242240565 8088457 3708541..3710799 1 NC_012880.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eca:ECA1009 biotin sulfoxide reductase; molybdopterin oxidoreductase 3710799 8088457 Dd703_3160 Dickeya dadantii Ech703 molybdopterin oxidoreductase YP_002988746.1 3708541 D 579405 CDS YP_002988747.1 242240566 8088458 complement(3710976..3711482) 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: ecc:c3738 hypothetical protein; hypothetical protein 3711482 8088458 Dd703_3161 Dickeya dadantii Ech703 hypothetical protein YP_002988747.1 3710976 R 579405 CDS YP_002988748.1 242240567 8088459 3712458..3713072 1 NC_012880.1 SMART: helix-turn-helix domain protein; KEGG: plu:plu1490 hypothetical protein; XRE family transcriptional regulator 3713072 8088459 Dd703_3162 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002988748.1 3712458 D 579405 CDS YP_002988749.1 242240568 8088460 3713073..3713942 1 NC_012880.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: spe:Spro_4196 hypothetical protein; hypothetical protein 3713942 8088460 Dd703_3163 Dickeya dadantii Ech703 hypothetical protein YP_002988749.1 3713073 D 579405 CDS YP_002988750.1 242240569 8088461 3713948..3714790 1 NC_012880.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3714790 queF 8088461 queF Dickeya dadantii Ech703 7-cyano-7-deazaguanine reductase YP_002988750.1 3713948 D 579405 CDS YP_002988751.1 242240570 8088462 complement(3714810..3715724) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B5653 LysR family transcriptional regulator; LysR family transcriptional regulator 3715724 8088462 Dd703_3165 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988751.1 3714810 R 579405 CDS YP_002988752.1 242240571 8088463 3715834..3716919 1 NC_012880.1 KEGG: reh:H16_A0477 3-isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 3716919 8088463 Dd703_3166 Dickeya dadantii Ech703 tartrate dehydrogenase YP_002988752.1 3715834 D 579405 CDS YP_002988753.1 242240572 8088464 3717367..3718569 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA0930 permease; major facilitator superfamily protein 3718569 8088464 Dd703_3167 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988753.1 3717367 D 579405 CDS YP_002988754.1 242240573 8088465 3718774..3720033 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_03296 ABC-type sugar transporter, periplasmic component; family 1 extracellular solute-binding protein 3720033 8088465 Dd703_3168 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002988754.1 3718774 D 579405 CDS YP_002988755.1 242240574 8088466 3720107..3720979 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hch:HCH_03297 ABC-type sugar transporter, permeases; binding-protein-dependent transporters inner membrane component 3720979 8088466 Dd703_3169 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988755.1 3720107 D 579405 CDS YP_002988756.1 242240575 8088467 3720976..3721803 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hch:HCH_03298 ABC-type sugar transporter, permease; binding-protein-dependent transporters inner membrane component 3721803 8088467 Dd703_3170 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988756.1 3720976 D 579405 CDS YP_002988757.1 242240576 8088468 3721813..3722877 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: mfa:Mfla_2347 ABC transporter; ABC transporter 3722877 8088468 Dd703_3171 Dickeya dadantii Ech703 ABC transporter YP_002988757.1 3721813 D 579405 CDS YP_002988758.1 242240577 8088469 3722878..3723645 1 NC_012880.1 KEGG: hch:HCH_04196 beta-lactamase superfamily hydrolase; beta-lactamase superfamily hydrolase 3723645 8088469 Dd703_3172 Dickeya dadantii Ech703 beta-lactamase superfamily hydrolase YP_002988758.1 3722878 D 579405 CDS YP_002988759.1 242240578 8088470 3723638..3724624 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hch:HCH_03302 transcriptional regulator; LacI family transcriptional regulator 3724624 8088470 Dd703_3173 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002988759.1 3723638 D 579405 CDS YP_002988760.1 242240579 8088471 3724781..3725011 1 NC_012880.1 TIGRFAM: selenium-binding protein YdfZ; KEGG: ent:Ent638_1936 cytoplasmic protein; selenium-binding protein YdfZ 3725011 8088471 Dd703_3174 Dickeya dadantii Ech703 selenium-binding protein YdfZ YP_002988760.1 3724781 D 579405 CDS YP_002988761.1 242240580 8088472 complement(3725068..3725964) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0916 LysR family transcriptional regulator; LysR family transcriptional regulator 3725964 8088472 Dd703_3175 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988761.1 3725068 R 579405 CDS YP_002988762.1 242240581 8088473 3726212..3727183 1 NC_012880.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: eca:ECA0915 hypothetical protein; alpha/beta hydrolase 3727183 8088473 Dd703_3176 Dickeya dadantii Ech703 alpha/beta hydrolase YP_002988762.1 3726212 D 579405 CDS YP_002988763.1 242240582 8088474 3727767..3728477 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA0914 component of polysulfide reductase; 4Fe-4S ferredoxin 3728477 8088474 Dd703_3177 Dickeya dadantii Ech703 4Fe-4S ferredoxin YP_002988763.1 3727767 D 579405 CDS YP_002988764.1 242240583 8088475 3728470..3729426 1 NC_012880.1 TIGRFAM: cytochrome C nitrite reductase, NrfD subunit; PFAM: polysulphide reductase NrfD; KEGG: eca:ECA0913 component of polysulfide reductase; cytochrome C nitrite reductase, NrfD subunit 3729426 8088475 Dd703_3178 Dickeya dadantii Ech703 cytochrome C nitrite reductase, NrfD subunit YP_002988764.1 3728470 D 579405 CDS YP_002988765.1 242240584 8089124 3729429..3730802 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0912 hypothetical protein; major facilitator superfamily protein 3730802 8089124 Dd703_3179 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988765.1 3729429 D 579405 CDS YP_002988766.1 242240585 8089125 3730858..3731208 1 NC_012880.1 PFAM: FMN-binding domain protein; KEGG: eca:ECA0911 hypothetical protein; FMN-binding domain-containing protein 3731208 8089125 Dd703_3180 Dickeya dadantii Ech703 FMN-binding domain-containing protein YP_002988766.1 3730858 D 579405 CDS YP_002988767.1 242240586 8089126 3731271..3732842 1 NC_012880.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: eca:ECA0910 flavoprotein subunit of a reductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 3732842 8089126 Dd703_3181 Dickeya dadantii Ech703 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_002988767.1 3731271 D 579405 CDS YP_002988768.1 242240587 8089127 complement(3732876..3733529) 1 NC_012880.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: eca:ECA0909 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 3733529 8089127 Dd703_3182 Dickeya dadantii Ech703 2OG-Fe(II) oxygenase YP_002988768.1 3732876 R 579405 CDS YP_002988769.1 242240588 8089128 3733621..3734298 1 NC_012880.1 KEGG: eca:ECA0907 DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; DNA-3-methyladenine glycosylase II 3734298 8089128 Dd703_3183 Dickeya dadantii Ech703 DNA-3-methyladenine glycosylase II YP_002988769.1 3733621 D 579405 CDS YP_002988770.1 242240589 8089129 3735008..3736657 1 NC_012880.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: eca:ECA0904 fumarate hydratase class I, aerobic; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 3736657 8089129 Dd703_3184 Dickeya dadantii Ech703 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_002988770.1 3735008 D 579405 CDS YP_002988771.1 242240590 8089130 complement(3737007..3737660) 1 NC_012880.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3737660 ribB 8089130 ribB Dickeya dadantii Ech703 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002988771.1 3737007 R 579405 CDS YP_002988772.1 242240591 8089131 3738104..3738388 1 NC_012880.1 PFAM: protein of unknown function DUF526; KEGG: spe:Spro_4287 hypothetical protein; hypothetical protein 3738388 8089131 Dd703_3186 Dickeya dadantii Ech703 hypothetical protein YP_002988772.1 3738104 D 579405 CDS YP_002988773.1 242240592 8089132 complement(3738430..3739698) 1 NC_012880.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH 3739698 8089132 Dd703_3187 Dickeya dadantii Ech703 inner membrane protein YjeH YP_002988773.1 3738430 R 579405 CDS YP_002988774.1 242240593 8089133 complement(3739944..3740900) 1 NC_012880.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 3740900 8089133 Dd703_3188 Dickeya dadantii Ech703 cell division protein ZipA YP_002988774.1 3739944 R 579405 CDS YP_002988775.1 242240594 8089134 3741121..3741891 1 NC_012880.1 PFAM: protein of unknown function DUF540; KEGG: eca:ECA0895 sulfate transporter CysZ; hypothetical protein 3741891 8089134 Dd703_3189 Dickeya dadantii Ech703 hypothetical protein YP_002988775.1 3741121 D 579405 CDS YP_002988776.1 242240595 8089135 3742035..3743003 1 NC_012880.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 3743003 8089135 Dd703_3190 Dickeya dadantii Ech703 cysteine synthase A YP_002988776.1 3742035 D 579405 CDS YP_002988777.1 242240596 8089136 3743419..3743676 1 NC_012880.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: ypg:YpAngola_A2748 phosphohistidinoprotein-hexose phosphotransferase component of PTS system (HPr); PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr 3743676 8089136 Dd703_3191 Dickeya dadantii Ech703 PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr YP_002988777.1 3743419 D 579405 CDS YP_002988778.1 242240597 8089137 3743725..3745452 1 NC_012880.1 phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transporter; phosphoenolpyruvate-protein phosphotransferase 3745452 8089137 Dd703_3192 Dickeya dadantii Ech703 phosphoenolpyruvate-protein phosphotransferase YP_002988778.1 3743725 D 579405 CDS YP_002988779.1 242240598 8089138 3745494..3746003 1 NC_012880.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 3746003 8089138 Dd703_3193 Dickeya dadantii Ech703 PTS system glucose-specific transporter YP_002988779.1 3745494 D 579405 CDS YP_002988780.1 242240599 8089139 complement(3746306..3747748) 1 NC_012880.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_3451 integral membrane sensor signal transduction histidine kinase; histidine kinase 3747748 8089139 Dd703_3194 Dickeya dadantii Ech703 histidine kinase YP_002988780.1 3746306 R 579405 CDS YP_002988781.1 242240600 8089140 complement(3747751..3748431) 1 NC_012880.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0889 two-component system response regulator; winged helix family two component transcriptional regulator 3748431 8089140 Dd703_3195 Dickeya dadantii Ech703 winged helix family two component transcriptional regulator YP_002988781.1 3747751 R 579405 CDS YP_002988782.1 242240601 8089141 complement(3748409..3748609) 1 NC_012880.1 hypothetical protein 3748609 8089141 Dd703_3196 Dickeya dadantii Ech703 hypothetical protein YP_002988782.1 3748409 R 579405 CDS YP_002988783.1 242240602 8089142 3748665..3749828 1 NC_012880.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: eca:ECA0888 macrolide-specific efflux protein maca precursor; RND family efflux transporter MFP subunit 3749828 8089142 Dd703_3197 Dickeya dadantii Ech703 RND family efflux transporter MFP subunit YP_002988783.1 3748665 D 579405 CDS YP_002988784.1 242240603 8089143 3749832..3751775 1 NC_012880.1 PFAM: ABC transporter; protein of unknown function DUF214; SMART: ATPase AAA; KEGG: eca:ECA0887 macrolide-specific ABC-type efflux carrier; ABC transporter 3751775 8089143 Dd703_3198 Dickeya dadantii Ech703 ABC transporter YP_002988784.1 3749832 D 579405 CDS YP_002988785.1 242240604 8089144 complement(3751818..3752699) 1 NC_012880.1 TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: plu:plu1391 cysteine synthase B; cysteine synthase B 3752699 8089144 Dd703_3199 Dickeya dadantii Ech703 cysteine synthase B YP_002988785.1 3751818 R 579405 CDS YP_002988786.1 242240605 8089145 complement(3752795..3753694) 1 NC_012880.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: eca:ECA0882 hypothetical protein; dyp-type peroxidase family protein 3753694 8089145 Dd703_3200 Dickeya dadantii Ech703 dyp-type peroxidase family protein YP_002988786.1 3752795 R 579405 CDS YP_002988787.1 242240606 8089146 complement(3753840..3755114) 1 NC_012880.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: eca:ECA0932 permease; cytosine/purines uracil thiamine allantoin permease 3755114 8089146 Dd703_3201 Dickeya dadantii Ech703 cytosine/purines uracil thiamine allantoin permease YP_002988787.1 3753840 R 579405 CDS YP_002988788.1 242240607 8089147 complement(3755135..3755824) 1 NC_012880.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: eca:ECA0933 LuxR family transcriptional regulator; LuxR family transcriptional regulator 3755824 8089147 Dd703_3202 Dickeya dadantii Ech703 LuxR family transcriptional regulator YP_002988788.1 3755135 R 579405 CDS YP_002988789.1 242240608 8089148 complement(3755852..3756280) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0513 acetyltransferase; N-acetyltransferase GCN5 3756280 8089148 Dd703_3203 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988789.1 3755852 R 579405 CDS YP_002988790.1 242240609 8089149 3756618..3756890 1 NC_012880.1 KEGG: eca:ECA0686 sugar fermentation stimulation protein; transcriptional regulator Nlp 3756890 8089149 Dd703_3204 Dickeya dadantii Ech703 transcriptional regulator Nlp YP_002988790.1 3756618 D 579405 CDS YP_002988791.1 242240610 8089150 complement(3757240..3757824) 1 NC_012880.1 PFAM: protein of unknown function DUF1131; KEGG: ypg:YpAngola_A2779 hypothetical protein; hypothetical protein 3757824 8089150 Dd703_3205 Dickeya dadantii Ech703 hypothetical protein YP_002988791.1 3757240 R 579405 CDS YP_002988792.1 242240611 8089151 3758871..3759716 1 NC_012880.1 hypothetical protein 3759716 8089151 Dd703_3206 Dickeya dadantii Ech703 hypothetical protein YP_002988792.1 3758871 D 579405 CDS YP_002988793.1 242240612 8089152 3759745..3760887 1 NC_012880.1 PFAM: aminotransferase class V; KEGG: pca:Pcar_1860 cysteine sulfinate desulfinase/cysteine desulfurase; cysteine desulfurase 3760887 8089152 Dd703_3207 Dickeya dadantii Ech703 cysteine desulfurase YP_002988793.1 3759745 D 579405 CDS YP_002988794.1 242240613 8089153 3760889..3761803 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gsu:GSU3407 hypothetical protein; hypothetical protein 3761803 8089153 Dd703_3208 Dickeya dadantii Ech703 hypothetical protein YP_002988794.1 3760889 D 579405 CDS YP_002988795.1 242240614 8089155 complement(3762040..3762465) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0875 acetyltransferase; acetyltransferase 3762465 8089155 Dd703_3210 Dickeya dadantii Ech703 acetyltransferase YP_002988795.1 3762040 R 579405 CDS YP_002988796.1 242240615 8089156 3762631..3763566 1 NC_012880.1 PFAM: coproporphyrinogen III oxidase; KEGG: eca:ECA0874 coproporphyrinogen III oxidase; coproporphyrinogen oxidase 3763566 8089156 Dd703_3211 Dickeya dadantii Ech703 coproporphyrinogen oxidase YP_002988796.1 3762631 D 579405 CDS YP_002988797.1 242240616 8089157 3763566..3764015 1 NC_012880.1 PFAM: protein of unknown function DUF188; KEGG: spe:Spro_3465 hypothetical protein; hypothetical protein 3764015 8089157 Dd703_3212 Dickeya dadantii Ech703 hypothetical protein YP_002988797.1 3763566 D 579405 CDS YP_002988798.1 242240617 8089158 complement(3764211..3766490) 1 NC_012880.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3766490 8089158 Dd703_3213 Dickeya dadantii Ech703 malic enzyme YP_002988798.1 3764211 R 579405 CDS YP_002988799.1 242240618 8089159 complement(3766949..3767524) 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA0847 MutT/NUDIX family protein; NUDIX hydrolase 3767524 8089159 Dd703_3214 Dickeya dadantii Ech703 NUDIX hydrolase YP_002988799.1 3766949 R 579405 CDS YP_002988800.1 242240619 8089160 complement(3767627..3768865) 1 NC_012880.1 TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: eca:ECA0843 manganese transporter MntH; manganese transporter MntH 3768865 8089160 Dd703_3215 Dickeya dadantii Ech703 manganese transporter MntH YP_002988800.1 3767627 R 579405 CDS YP_002988801.1 242240620 8089161 complement(3769252..3769839) 1 NC_012880.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 3769839 8089161 Dd703_3216 Dickeya dadantii Ech703 heat shock protein GrpE YP_002988801.1 3769252 R 579405 CDS YP_002988802.1 242240621 8089162 3769982..3770860 1 NC_012880.1 PFAM: ATP-NAD/AcoX kinase; KEGG: eca:ECA0841 inorganic polyphosphate/ATP-NAD kinase; NAD(+) kinase 3770860 8089162 Dd703_3217 Dickeya dadantii Ech703 NAD(+) kinase YP_002988802.1 3769982 D 579405 CDS YP_002988803.1 242240622 8089163 3770944..3772605 1 NC_012880.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: eca:ECA0840 recombination and repair protein; recombination and repair protein 3772605 8089163 Dd703_3218 Dickeya dadantii Ech703 recombination and repair protein YP_002988803.1 3770944 D 579405 CDS YP_002988804.1 242240623 8089164 3772718..3773056 1 NC_012880.1 PFAM: SmpA/OmlA domain protein; KEGG: eca:ECA0839 hypothetical protein; hypothetical protein 3773056 8089164 Dd703_3219 Dickeya dadantii Ech703 hypothetical protein YP_002988804.1 3772718 D 579405 CDS YP_002988805.1 242240624 8089165 complement(3773110..3773403) 1 NC_012880.1 PFAM: protein of unknown function UPF0125; KEGG: eca:ECA0838 hypothetical protein; hypothetical protein 3773403 8089165 Dd703_3220 Dickeya dadantii Ech703 hypothetical protein YP_002988805.1 3773110 R 579405 CDS YP_002988806.1 242240625 8089166 complement(3773396..3773830) 1 NC_012880.1 PFAM: cyclase/dehydrase; KEGG: eca:ECA0837 hypothetical protein; cyclase/dehydrase 3773830 8089166 Dd703_3221 Dickeya dadantii Ech703 cyclase/dehydrase YP_002988806.1 3773396 R 579405 CDS YP_002988807.1 242240626 8089167 3773986..3774468 1 NC_012880.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: cko:CKO_03942 hypothetical protein; SsrA-binding protein 3774468 8089167 Dd703_3222 Dickeya dadantii Ech703 SsrA-binding protein YP_002988807.1 3773986 D 579405 CDS YP_002988808.1 242240627 8089169 3775059..3776300 1 NC_012880.1 CP4-57 prophage; integrase; integrase 3776300 8089169 Dd703_3223 Dickeya dadantii Ech703 integrase YP_002988808.1 3775059 D 579405 CDS YP_002988809.1 242240628 8089170 complement(3776370..3776636) 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ses:SARI_03129 hypothetical protein; XRE family transcriptional regulator 3776636 8089170 Dd703_3224 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002988809.1 3776370 R 579405 CDS YP_002988810.1 242240629 8089171 complement(3776745..3777026) 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ses:SARI_03129 hypothetical protein; XRE family transcriptional regulator 3777026 8089171 Dd703_3225 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002988810.1 3776745 R 579405 CDS YP_002988811.1 242240630 8089172 3777186..3777431 1 NC_012880.1 KEGG: spq:SPAB_01127 hypothetical protein; transcriptional regulator Nlp 3777431 8089172 Dd703_3226 Dickeya dadantii Ech703 transcriptional regulator Nlp YP_002988811.1 3777186 D 579405 CDS YP_002988812.1 242240631 8089173 3778637..3780457 1 NC_012880.1 KEGG: smd:Smed_5452 hypothetical protein; hypothetical protein 3780457 8089173 Dd703_3227 Dickeya dadantii Ech703 hypothetical protein YP_002988812.1 3778637 D 579405 CDS YP_002988813.1 242240632 8089174 complement(3780586..3780711) 1 NC_012880.1 hypothetical protein 3780711 8089174 Dd703_3228 Dickeya dadantii Ech703 hypothetical protein YP_002988813.1 3780586 R 579405 CDS YP_002988814.1 242240633 8089175 complement(3781035..3781967) 1 NC_012880.1 KEGG: dar:Daro_3104 hypothetical protein; hypothetical protein 3781967 8089175 Dd703_3229 Dickeya dadantii Ech703 hypothetical protein YP_002988814.1 3781035 R 579405 CDS YP_002988815.1 242240634 8089176 3782277..3782855 1 NC_012880.1 KEGG: spe:Spro_0117 hypothetical protein; hypothetical protein 3782855 8089176 Dd703_3230 Dickeya dadantii Ech703 hypothetical protein YP_002988815.1 3782277 D 579405 CDS YP_002988816.1 242240635 8089177 3783082..3784059 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: ses:SARI_00892 hypothetical protein; family 1 extracellular solute-binding protein 3784059 8089177 Dd703_3231 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002988816.1 3783082 D 579405 CDS YP_002988817.1 242240636 8089178 3784062..3785774 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ses:SARI_00893 hypothetical protein; binding-protein-dependent transporters inner membrane component 3785774 8089178 Dd703_3232 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988817.1 3784062 D 579405 CDS YP_002988818.1 242240637 8089179 3785762..3786796 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: ses:SARI_00894 hypothetical protein; ABC transporter 3786796 8089179 Dd703_3233 Dickeya dadantii Ech703 ABC transporter YP_002988818.1 3785762 D 579405 CDS YP_002988819.1 242240638 8089180 complement(3786817..3787929) 1 NC_012880.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA2065 N-acylamino acid racemase; mandelate racemase/muconate lactonizing protein 3787929 8089180 Dd703_3234 Dickeya dadantii Ech703 mandelate racemase/muconate lactonizing protein YP_002988819.1 3786817 R 579405 CDS YP_002988820.1 242240639 8089181 complement(3787956..3789170) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_0231 major facilitator transporter; major facilitator superfamily protein 3789170 8089181 Dd703_3235 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002988820.1 3787956 R 579405 CDS YP_002988821.1 242240640 8089182 3789352..3790275 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mmw:Mmwyl1_3825 LysR family transcriptional regulator; LysR family transcriptional regulator 3790275 8089182 Dd703_3236 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988821.1 3789352 D 579405 CDS YP_002988822.1 242240641 8089183 3790336..3791487 1 NC_012880.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B 3791487 8089183 Dd703_3237 Dickeya dadantii Ech703 murein hydrolase B YP_002988822.1 3790336 D 579405 CDS YP_002988823.1 242240642 8089184 3791897..3793195 1 NC_012880.1 KEGG: mmw:Mmwyl1_0140 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; chemotaxis sensory transducer; hypothetical protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 3793195 8089184 Dd703_3238 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_002988823.1 3791897 D 579405 CDS YP_002988824.1 242240643 8089185 complement(3793446..3794840) 1 NC_012880.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_33160 amino acid permease-associated protein; amino acid permease-associated protein 3794840 8089185 Dd703_3239 Dickeya dadantii Ech703 amino acid permease-associated protein YP_002988824.1 3793446 R 579405 CDS YP_002988825.1 242240644 8089186 complement(3795001..3796155) 1 NC_012880.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dvm:DvMF_1315 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 3796155 8089186 Dd703_3240 Dickeya dadantii Ech703 iron-containing alcohol dehydrogenase YP_002988825.1 3795001 R 579405 CDS YP_002988826.1 242240645 8089187 complement(3796167..3797534) 1 NC_012880.1 PFAM: aminotransferase class-III; KEGG: 4-aminobutyrate transaminase; class III aminotransferase 3797534 8089187 Dd703_3241 Dickeya dadantii Ech703 class III aminotransferase YP_002988826.1 3796167 R 579405 CDS YP_002988827.1 242240646 8089188 complement(3797800..3798624) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_0462 helix-turn-helix domain-containing protein; AraC family transcriptional regulator 3798624 8089188 Dd703_3242 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002988827.1 3797800 R 579405 CDS YP_002988828.1 242240647 8089189 3798925..3800025 1 NC_012880.1 KEGG: yen:YE3211 D-alanine--D-alanine ligase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; D-alanine--D-alanine ligase 3800025 8089189 Dd703_3243 Dickeya dadantii Ech703 D-alanine--D-alanine ligase YP_002988828.1 3798925 D 579405 CDS YP_002988829.1 242240648 8089190 complement(3800071..3800355) 1 NC_012880.1 PFAM: YCII-related; KEGG: yen:YE1740 hypothetical protein; hypothetical protein 3800355 8089190 Dd703_3244 Dickeya dadantii Ech703 hypothetical protein YP_002988829.1 3800071 R 579405 CDS YP_002988830.1 242240649 8089192 3800904..3801143 1 NC_012880.1 PFAM: DinI family protein; KEGG: yen:YE1408 stress response protein; DinI family protein 3801143 8089192 Dd703_3246 Dickeya dadantii Ech703 DinI family protein YP_002988830.1 3800904 D 579405 CDS YP_002988831.1 242240650 8089193 complement(3801278..3802006) 1 NC_012880.1 KEGG: sed:SeD_A1838 lipoprotein YnfC; hypothetical protein 3802006 8089193 Dd703_3247 Dickeya dadantii Ech703 hypothetical protein YP_002988831.1 3801278 R 579405 CDS YP_002988832.1 242240651 8089194 complement(3802175..3802723) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB1066 acetyltransferase; N-acetyltransferase GCN5 3802723 8089194 Dd703_3248 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988832.1 3802175 R 579405 CDS YP_002988833.1 242240652 8089195 complement(3802835..3803257) 1 NC_012880.1 KEGG: eca:ECA0825 hypothetical protein; hypothetical protein 3803257 8089195 Dd703_3249 Dickeya dadantii Ech703 hypothetical protein YP_002988833.1 3802835 R 579405 CDS YP_002988834.1 242240653 8089196 3803884..3807417 1 NC_012880.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA0824 pyruvate-flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 3807417 8089196 Dd703_3250 Dickeya dadantii Ech703 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002988834.1 3803884 D 579405 CDS YP_002988835.1 242240654 8089197 3807645..3808745 1 NC_012880.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eca:ECA0821 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3808745 8089197 Dd703_3251 Dickeya dadantii Ech703 ErfK/YbiS/YcfS/YnhG family protein YP_002988835.1 3807645 D 579405 CDS YP_002988836.1 242240655 8089198 3808968..3809423 1 NC_012880.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bpt:Bpet2973 MarR family transcriptional regulator; MarR family transcriptional regulator 3809423 8089198 Dd703_3252 Dickeya dadantii Ech703 MarR family transcriptional regulator YP_002988836.1 3808968 D 579405 CDS YP_002988837.1 242240656 8089199 3809420..3810541 1 NC_012880.1 PFAM: secretion protein HlyD; KEGG: maq:Maqu_0618 secretion protein HlyD; secretion protein HlyD 3810541 8089199 Dd703_3253 Dickeya dadantii Ech703 secretion protein HlyD YP_002988837.1 3809420 D 579405 CDS YP_002988838.1 242240657 8089200 3810528..3812123 1 NC_012880.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: maq:Maqu_0617 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 3812123 8089200 Dd703_3254 Dickeya dadantii Ech703 EmrB/QacA subfamily drug resistance transporter YP_002988838.1 3810528 D 579405 CDS YP_002988839.1 242240658 8089201 complement(3812440..3812649) 1 NC_012880.1 SMART: helix-turn-helix domain protein; KEGG: xau:Xaut_0314 XRE family transcriptional regulator; XRE family transcriptional regulator 3812649 8089201 Dd703_3255 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002988839.1 3812440 R 579405 CDS YP_002988840.1 242240659 8089202 3813089..3814615 1 NC_012880.1 KEGG: eca:ECA0817 oligogalacturonide transporter; oligogalacturonide transporter 3814615 8089202 Dd703_3256 Dickeya dadantii Ech703 oligogalacturonide transporter YP_002988840.1 3813089 D 579405 CDS YP_002988841.1 242240660 8089203 complement(3814680..3815690) 1 NC_012880.1 KEGG: eca:ECA0815 hypothetical protein; hypothetical protein 3815690 8089203 Dd703_3257 Dickeya dadantii Ech703 hypothetical protein YP_002988841.1 3814680 R 579405 CDS YP_002988842.1 242240661 8089204 complement(3816456..3816848) 1 NC_012880.1 KEGG: eca:ECA0809 global regulatory protein; global regulatory protein 3816848 8089204 Dd703_3258 Dickeya dadantii Ech703 global regulatory protein YP_002988842.1 3816456 R 579405 CDS YP_002988843.1 242240662 8089205 complement(3817124..3817321) 1 NC_012880.1 hypothetical protein 3817321 8089205 Dd703_3259 Dickeya dadantii Ech703 hypothetical protein YP_002988843.1 3817124 R 579405 CDS YP_002988844.1 242240663 8089206 3817632..3819593 1 NC_012880.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 3819593 8089206 Dd703_3260 Dickeya dadantii Ech703 acetyl-CoA synthetase YP_002988844.1 3817632 D 579405 CDS YP_002988845.1 242240664 8089207 3819705..3820016 1 NC_012880.1 PFAM: protein of unknown function DUF485; KEGG: eca:ECA0807 hypothetical protein; hypothetical protein 3820016 8089207 Dd703_3261 Dickeya dadantii Ech703 hypothetical protein YP_002988845.1 3819705 D 579405 CDS YP_002988846.1 242240665 8089208 3820013..3821671 1 NC_012880.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 3821671 actP 8089208 actP Dickeya dadantii Ech703 acetate permease YP_002988846.1 3820013 D 579405 CDS YP_002988847.1 242240666 8089209 complement(3821748..3823394) 1 NC_012880.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: eca:ECA0784 sodium/hydrogen antiporter; Na+/H+ antiporter 3823394 8089209 Dd703_3263 Dickeya dadantii Ech703 Na+/H+ antiporter YP_002988847.1 3821748 R 579405 CDS YP_002988848.1 242240667 8089210 complement(3823704..3825071) 1 NC_012880.1 PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: eca:ECA0783 permease; xanthine/uracil/vitamin C permease 3825071 8089210 Dd703_3264 Dickeya dadantii Ech703 xanthine/uracil/vitamin C permease YP_002988848.1 3823704 R 579405 CDS YP_002988849.1 242240668 8089211 complement(3825889..3826317) 1 NC_012880.1 PFAM: TOBE domain protein; KEGG: eum:ECUMN_3055 molybdenum-pterin-binding-protein; TOBE domain-containing protein 3826317 8089211 Dd703_3265 Dickeya dadantii Ech703 TOBE domain-containing protein YP_002988849.1 3825889 R 579405 CDS YP_002988850.1 242240669 8089212 3826528..3827400 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpn:KPN_04682 sn-glycerol-3-phosphate transporter permease; binding-protein-dependent transporters inner membrane component 3827400 8089212 Dd703_3266 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988850.1 3826528 D 579405 CDS YP_002988851.1 242240670 8089213 3827390..3828277 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpn:KPN_04681 sn-glycerol-3-phosphate transporter permease; binding-protein-dependent transporters inner membrane component 3828277 8089213 Dd703_3267 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988851.1 3827390 D 579405 CDS YP_002988852.1 242240671 8089214 3828288..3829112 1 NC_012880.1 PFAM: metallophosphoesterase; KEGG: kpn:KPN_04680 phosphohydrolase; metallophosphoesterase 3829112 8089214 Dd703_3268 Dickeya dadantii Ech703 metallophosphoesterase YP_002988852.1 3828288 D 579405 CDS YP_002988853.1 242240672 8089215 3829112..3830197 1 NC_012880.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: kpe:KPK_4986 sugar ABC transporter ATP-binding protein; ABC transporter 3830197 8089215 Dd703_3269 Dickeya dadantii Ech703 ABC transporter YP_002988853.1 3829112 D 579405 CDS YP_002988854.1 242240673 8089216 3830190..3831497 1 NC_012880.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpe:KPK_4987 ABC transporter periplasmic substrate-binding protein; family 1 extracellular solute-binding protein 3831497 8089216 Dd703_3270 Dickeya dadantii Ech703 family 1 extracellular solute-binding protein YP_002988854.1 3830190 D 579405 CDS YP_002988855.1 242240674 8089217 complement(3831628..3832176) 1 NC_012880.1 PFAM: sugar transferase; KEGG: vco:VC0395_A2640 capsule biosynthesis protein; sugar transferase 3832176 8089217 Dd703_3271 Dickeya dadantii Ech703 sugar transferase YP_002988855.1 3831628 R 579405 CDS YP_002988856.1 242240675 8089218 complement(3832186..3833211) 1 NC_012880.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: vco:VC0395_A2639 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 3833211 8089218 Dd703_3272 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002988856.1 3832186 R 579405 CDS YP_002988857.1 242240676 8089219 3833312..3835198 1 NC_012880.1 PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: vch:VC0260 mannosyl-transferase; polysaccharide biosynthesis protein CapD 3835198 8089219 Dd703_3273 Dickeya dadantii Ech703 polysaccharide biosynthesis protein CapD YP_002988857.1 3833312 D 579405 CDS YP_002988858.1 242240677 8089220 complement(3835259..3836392) 1 NC_012880.1 PFAM: glycosyl transferase group 1; KEGG: aha:AHA_2894 glycosyl transferase, group 1; group 1 glycosyl transferase 3836392 8089220 Dd703_3274 Dickeya dadantii Ech703 group 1 glycosyl transferase YP_002988858.1 3835259 R 579405 CDS YP_002988859.1 242240678 8089221 complement(3836392..3837534) 1 NC_012880.1 PFAM: glycosyl transferase group 1; KEGG: ppw:PputW619_1410 glycosyl transferase group 1; group 1 glycosyl transferase 3837534 8089221 Dd703_3275 Dickeya dadantii Ech703 group 1 glycosyl transferase YP_002988859.1 3836392 R 579405 CDS YP_002988860.1 242240679 8089222 complement(3837531..3838421) 1 NC_012880.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: ppw:PputW619_1409 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3838421 8089222 Dd703_3276 Dickeya dadantii Ech703 NAD-dependent epimerase/dehydratase YP_002988860.1 3837531 R 579405 CDS YP_002988861.1 242240680 8089223 complement(3838421..3839455) 1 NC_012880.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bam:Bamb_0759 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 3839455 8089223 Dd703_3277 Dickeya dadantii Ech703 GDP-mannose 4,6-dehydratase YP_002988861.1 3838421 R 579405 CDS YP_002988862.1 242240681 8089224 complement(3839805..3842357) 1 NC_012880.1 PFAM: glycosyl transferase group 1; KEGG: psp:PSPPH_0957 mannosyltransferase; group 1 glycosyl transferase 3842357 8089224 Dd703_3278 Dickeya dadantii Ech703 group 1 glycosyl transferase YP_002988862.1 3839805 R 579405 CDS YP_002988863.1 242240682 8089225 complement(3842357..3842929) 1 NC_012880.1 KEGG: bam:Bamb_0757 methyltransferase type 11; hypothetical protein 3842929 8089225 Dd703_3279 Dickeya dadantii Ech703 hypothetical protein YP_002988863.1 3842357 R 579405 CDS YP_002988864.1 242240683 8089226 complement(3843225..3844589) 1 NC_012880.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; KEGG: aha:AHA_2903 phosphomannomutase; phosphomannomutase 3844589 8089226 Dd703_3280 Dickeya dadantii Ech703 phosphomannomutase YP_002988864.1 3843225 R 579405 CDS YP_002988865.1 242240684 8089227 complement(3844586..3846016) 1 NC_012880.1 KEGG: pol:Bpro_4942 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3846016 8089227 Dd703_3281 Dickeya dadantii Ech703 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002988865.1 3844586 R 579405 CDS YP_002988866.1 242240685 8089228 complement(3846572..3846949) 1 NC_012880.1 PFAM: helix-turn-helix HxlR type; KEGG: xau:Xaut_0313 HxlR family transcriptional regulator; HxlR family transcriptional regulator 3846949 8089228 Dd703_3282 Dickeya dadantii Ech703 HxlR family transcriptional regulator YP_002988866.1 3846572 R 579405 CDS YP_002988867.1 242240686 8089229 3847281..3848465 1 NC_012880.1 PFAM: methionine synthase vitamin-B12 independent; KEGG: cko:CKO_01563 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; vitamin-B12 independent methionine synthase 3848465 8089229 Dd703_3283 Dickeya dadantii Ech703 vitamin-B12 independent methionine synthase YP_002988867.1 3847281 D 579405 CDS YP_002988868.1 242240687 8089230 complement(3848812..3848955) 1 NC_012880.1 hypothetical protein 3848955 8089230 Dd703_3284 Dickeya dadantii Ech703 hypothetical protein YP_002988868.1 3848812 R 579405 CDS YP_002988869.1 242240688 8089231 3849016..3850077 1 NC_012880.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: apa:APP7_1471 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 3850077 8089231 Dd703_3285 Dickeya dadantii Ech703 dTDP-glucose 4,6-dehydratase YP_002988869.1 3849016 D 579405 CDS YP_002988870.1 242240689 8089232 3850074..3850940 1 NC_012880.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: shl:Shal_1487 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3850940 8089232 Dd703_3286 Dickeya dadantii Ech703 glucose-1-phosphate thymidylyltransferase YP_002988870.1 3850074 D 579405 CDS YP_002988871.1 242240690 8089233 3850962..3851834 1 NC_012880.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase; KEGG: vsa:VSAL_I3020 dTDP-6-deoxy-L-mannose-dehydrogenase; dTDP-4-dehydrorhamnose reductase 3851834 8089233 Dd703_3287 Dickeya dadantii Ech703 dTDP-4-dehydrorhamnose reductase YP_002988871.1 3850962 D 579405 CDS YP_002988872.1 242240691 8089234 3851844..3852401 1 NC_012880.1 KEGG: vsa:VSAL_I3021 dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 3852401 8089234 Dd703_3288 Dickeya dadantii Ech703 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002988872.1 3851844 D 579405 CDS YP_002988873.1 242240692 8089236 complement(3853065..3853736) 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA0776 hypothetical protein; lysine exporter protein LysE/YggA 3853736 8089236 Dd703_3289 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002988873.1 3853065 R 579405 CDS YP_002988874.1 242240693 8089237 complement(3853971..3854960) 1 NC_012880.1 PFAM: protein of unknown function DUF979; KEGG: eta:ETA_23120 predicted membrane protein; hypothetical protein 3854960 8089237 Dd703_3290 Dickeya dadantii Ech703 hypothetical protein YP_002988874.1 3853971 R 579405 CDS YP_002988875.1 242240694 8089238 complement(3854964..3855683) 1 NC_012880.1 PFAM: protein of unknown function DUF969; KEGG: spe:Spro_1258 hypothetical protein; hypothetical protein 3855683 8089238 Dd703_3291 Dickeya dadantii Ech703 hypothetical protein YP_002988875.1 3854964 R 579405 CDS YP_002988876.1 242240695 8089239 complement(3855846..3857579) 1 NC_012880.1 PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: plu:plu4306 hypothetical protein; carbamoyl-phosphate synthase L chain ATP-binding 3857579 8089239 Dd703_3292 Dickeya dadantii Ech703 carbamoyl-phosphate synthase L chain ATP-binding YP_002988876.1 3855846 R 579405 CDS YP_002988877.1 242240696 8089240 complement(3857601..3859211) 1 NC_012880.1 KEGG: aav:Aave_3511 allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 2; allophanate hydrolase subunit 1; urea amidolyase-like protein 3859211 8089240 Dd703_3293 Dickeya dadantii Ech703 urea amidolyase-like protein YP_002988877.1 3857601 R 579405 CDS YP_002988878.1 242240697 8089241 complement(3859208..3859975) 1 NC_012880.1 PFAM: LamB/YcsF family protein; KEGG: pst:PSPTO_5378 hypothetical protein; LamB/YcsF family protein 3859975 8089241 Dd703_3294 Dickeya dadantii Ech703 LamB/YcsF family protein YP_002988878.1 3859208 R 579405 CDS YP_002988879.1 242240698 8089242 3860255..3860953 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: plu:plu4300 hypothetical protein; GntR family transcriptional regulator 3860953 8089242 Dd703_3295 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002988879.1 3860255 D 579405 CDS YP_002988880.1 242240699 8089243 complement(3861039..3862556) 1 NC_012880.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 3862556 lysS 8089243 lysS Dickeya dadantii Ech703 lysyl-tRNA synthetase YP_002988880.1 3861039 R 579405 CDS YP_002988881.1 242240700 8089244 complement(join(3862566..3863588,3863590..3863664)) 1 NC_012880.1 KEGG: bpm:BURPS1710b_1732 hypothetical protein; hypothetical protein 3863664 8089244 Dd703_3297 Dickeya dadantii Ech703 hypothetical protein YP_002988881.1 3862566 R 579405 CDS YP_002988882.1 242240701 8089245 complement(3863798..3865540) 1 NC_012880.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: eca:ECA0772 ssDNA exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3865540 8089245 Dd703_3298 Dickeya dadantii Ech703 single-stranded-DNA-specific exonuclease RecJ YP_002988882.1 3863798 R 579405 CDS YP_002988883.1 242240702 8089246 complement(3865547..3866266) 1 NC_012880.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC 3866266 8089246 Dd703_3299 Dickeya dadantii Ech703 thiol:disulfide interchange protein DsbC YP_002988883.1 3865547 R 579405 CDS YP_002988884.1 242240703 8089247 complement(3866351..3867250) 1 NC_012880.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: eca:ECA0770 site-specific tyrosine recombinase XerD; tyrosine recombinase XerD 3867250 8089247 Dd703_3300 Dickeya dadantii Ech703 tyrosine recombinase XerD YP_002988884.1 3866351 R 579405 CDS YP_002988885.1 242240704 8089248 3867646..3868482 1 NC_012880.1 PFAM: HpcH/HpaI aldolase; KEGG: kpn:KPN_02650 aldolase; aldolase 3868482 8089248 Dd703_3301 Dickeya dadantii Ech703 aldolase YP_002988885.1 3867646 D 579405 CDS YP_002988886.1 242240705 8089249 3868791..3870125 1 NC_012880.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA0769 transporter; metabolite/H+ symporter, major facilitator superfamily (MFS) 3870125 8089249 Dd703_3302 Dickeya dadantii Ech703 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_002988886.1 3868791 D 579405 CDS YP_002988887.1 242240706 8089250 3870284..3870802 1 NC_012880.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 3870802 8089250 Dd703_3303 Dickeya dadantii Ech703 flavodoxin FldB YP_002988887.1 3870284 D 579405 CDS YP_002988888.1 242240707 8089251 complement(3870830..3871258) 1 NC_012880.1 PFAM: protein of unknown function DUF1434; KEGG: eca:ECA0760 hypothetical protein; hypothetical protein 3871258 8089251 Dd703_3304 Dickeya dadantii Ech703 hypothetical protein YP_002988888.1 3870830 R 579405 CDS YP_002988889.1 242240708 8089252 complement(3871239..3871505) 1 NC_012880.1 PFAM: protein of unknown function DUF339; KEGG: eca:ECA0759 hypothetical protein; hypothetical protein 3871505 8089252 Dd703_3305 Dickeya dadantii Ech703 hypothetical protein YP_002988889.1 3871239 R 579405 CDS YP_002988890.1 242240709 8089253 3871744..3872730 1 NC_012880.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: eca:ECA0758 global regulator; folate-binding protein YgfZ 3872730 8089253 Dd703_3306 Dickeya dadantii Ech703 folate-binding protein YgfZ YP_002988890.1 3871744 D 579405 CDS YP_002988891.1 242240710 8089254 complement(3872794..3873441) 1 NC_012880.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: eca:ECA0757 hypothetical protein; hemolysin III family channel protein 3873441 8089254 Dd703_3307 Dickeya dadantii Ech703 hemolysin III family channel protein YP_002988891.1 3872794 R 579405 CDS YP_002988892.1 242240711 8089255 3873658..3874266 1 NC_012880.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: spe:Spro_3901 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3874266 8089255 Dd703_3308 Dickeya dadantii Ech703 metal dependent phosphohydrolase YP_002988892.1 3873658 D 579405 CDS YP_002988893.1 242240712 8089256 complement(3874388..3877261) 1 NC_012880.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3877261 8089256 Dd703_3309 Dickeya dadantii Ech703 glycine dehydrogenase YP_002988893.1 3874388 R 579405 CDS YP_002988894.1 242240713 8089257 complement(3877342..3877752) 1 NC_012880.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3877752 8089257 Dd703_3310 Dickeya dadantii Ech703 glycine cleavage system protein H YP_002988894.1 3877342 R 579405 CDS YP_002988895.1 242240714 8089258 complement(3877783..3878883) 1 NC_012880.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3878883 gcvT 8089258 gcvT Dickeya dadantii Ech703 glycine cleavage system aminomethyltransferase T YP_002988895.1 3877783 R 579405 CDS YP_002988896.1 242240715 8089259 3879464..3880285 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_3990 extracellular solute-binding protein; family 3 extracellular solute-binding protein 3880285 8089259 Dd703_3312 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002988896.1 3879464 D 579405 CDS YP_002988897.1 242240716 8089260 3880430..3881938 1 NC_012880.1 KEGG: bam:Bamb_3989 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: ABC transporter; binding-protein-dependent transporters inner membrane component; SMART: ATPase AAA; polar amino acid ABC transporter permease 3881938 8089260 Dd703_3313 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002988897.1 3880430 D 579405 CDS YP_002988898.1 242240717 8089261 3881948..3882658 1 NC_012880.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: bac:BamMC406_4450 GntR family transcriptional regulator; GntR family transcriptional regulator 3882658 8089261 Dd703_3314 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002988898.1 3881948 D 579405 CDS YP_002988899.1 242240718 8089262 3882661..3883497 1 NC_012880.1 KEGG: bmj:BMULJ_04417 hypothetical protein; hypothetical protein 3883497 8089262 Dd703_3315 Dickeya dadantii Ech703 hypothetical protein YP_002988899.1 3882661 D 579405 CDS YP_002988900.1 242240719 8089263 3884047..3885198 1 NC_012880.1 TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; KEGG: eca:ECA0742 L-1,2-propanediol oxidoreductase; L-1,2-propanediol oxidoreductase 3885198 8089263 Dd703_3316 Dickeya dadantii Ech703 L-1,2-propanediol oxidoreductase YP_002988900.1 3884047 D 579405 CDS YP_002988901.1 242240720 8089264 complement(3885532..3887211) 1 NC_012880.1 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 3887211 8089264 Dd703_3317 Dickeya dadantii Ech703 acetolactate synthase YP_002988901.1 3885532 R 579405 CDS YP_002988902.1 242240721 8089265 complement(3887295..3888077) 1 NC_012880.1 KEGG: yen:YE4016 alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 3888077 8089265 Dd703_3318 Dickeya dadantii Ech703 alpha-acetolactate decarboxylase YP_002988902.1 3887295 R 579405 CDS YP_002988903.1 242240722 8089266 3888195..3889127 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0739 LysR family transcriptional regulator; LysR family transcriptional regulator 3889127 8089266 Dd703_3319 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988903.1 3888195 D 579405 CDS YP_002988904.1 242240723 8089267 3889226..3889504 1 NC_012880.1 KEGG: spe:Spro_0646 hypothetical protein; hypothetical protein 3889504 8089267 Dd703_3320 Dickeya dadantii Ech703 hypothetical protein YP_002988904.1 3889226 D 579405 CDS YP_002988905.1 242240724 8089271 complement(3890047..3890967) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0737 LysR family transcriptional regulator; LysR family transcriptional regulator 3890967 8089271 Dd703_3321 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988905.1 3890047 R 579405 CDS YP_002988906.1 242240725 8089272 3891080..3892072 1 NC_012880.1 PFAM: aldo/keto reductase; KEGG: eca:ECA0736 aldo/keto reductase; aldo/keto reductase 3892072 8089272 Dd703_3322 Dickeya dadantii Ech703 aldo/keto reductase YP_002988906.1 3891080 D 579405 CDS YP_002988907.1 242240726 8089273 complement(3892111..3893145) 1 NC_012880.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 3893145 rsmC 8089273 rsmC Dickeya dadantii Ech703 16S ribosomal RNA m2G1207 methyltransferase YP_002988907.1 3892111 R 579405 CDS YP_002988908.1 242240727 8089274 3893253..3893690 1 NC_012880.1 PFAM: DNA polymerase III psi subunit; KEGG: spe:Spro_0650 DNA polymerase III subunit psi; DNA polymerase III psi subunit 3893690 8089274 Dd703_3324 Dickeya dadantii Ech703 DNA polymerase III psi subunit YP_002988908.1 3893253 D 579405 CDS YP_002988909.1 242240728 8089275 3893635..3894078 1 NC_012880.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 3894078 rimI 8089275 rimI Dickeya dadantii Ech703 ribosomal-protein-alanine N-acetyltransferase YP_002988909.1 3893635 D 579405 CDS YP_002988910.1 242240729 8089276 3894196..3894735 1 NC_012880.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: azo:azo2513 RNA polymerase ECF-subfamily sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 3894735 8089276 Dd703_3326 Dickeya dadantii Ech703 ECF subfamily RNA polymerase sigma-24 subunit YP_002988910.1 3894196 D 579405 CDS YP_002988911.1 242240730 8089277 3894732..3895715 1 NC_012880.1 PFAM: FecR protein; KEGG: neu:NE1218 FecR protein; anti-FecI sigma factor FecR 3895715 8089277 Dd703_3327 Dickeya dadantii Ech703 anti-FecI sigma factor FecR YP_002988911.1 3894732 D 579405 CDS YP_002988912.1 242240731 8089278 3895808..3898276 1 NC_012880.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: ccv:CCV52592_0400 ferripyoverdine receptor; TonB-dependent siderophore receptor 3898276 8089278 Dd703_3328 Dickeya dadantii Ech703 TonB-dependent siderophore receptor YP_002988912.1 3895808 D 579405 CDS YP_002988913.1 242240732 8089279 3898311..3899993 1 NC_012880.1 PFAM: ABC transporter domain protein; ABC transporter related; SbmABacA family protein; SMART: ATPase AAA; KEGG: swp:swp_4955 ABC-type uncharacterized transporter, permease and ATPase components; ABC transporter 3899993 8089279 Dd703_3329 Dickeya dadantii Ech703 ABC transporter YP_002988913.1 3898311 D 579405 CDS YP_002988914.1 242240733 8089280 complement(3900070..3900795) 1 NC_012880.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: eta:ETA_06690 purine nucleoside phosphorylase DeoD-type; purine nucleoside phosphorylase 3900795 8089280 Dd703_3330 Dickeya dadantii Ech703 purine nucleoside phosphorylase YP_002988914.1 3900070 R 579405 CDS YP_002988915.1 242240734 8089281 complement(3900866..3902089) 1 NC_012880.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 3902089 8089281 Dd703_3331 Dickeya dadantii Ech703 phosphopentomutase YP_002988915.1 3900866 R 579405 CDS YP_002988916.1 242240735 8089282 complement(3902138..3903472) 1 NC_012880.1 KEGG: eca:ECA0728 thymidine phosphorylase; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like; thymidine phosphorylase 3903472 8089282 Dd703_3332 Dickeya dadantii Ech703 thymidine phosphorylase YP_002988916.1 3902138 R 579405 CDS YP_002988917.1 242240736 8089283 complement(3903541..3904320) 1 NC_012880.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3904320 8089283 Dd703_3333 Dickeya dadantii Ech703 deoxyribose-phosphate aldolase YP_002988917.1 3903541 R 579405 CDS YP_002988918.1 242240737 8089284 3905016..3905318 1 NC_012880.1 PFAM: excinuclease ABC C subunit domain protein; KEGG: yen:YE0453 GIY-YIG nuclease superfamily protein; excinuclease ABC subunit C 3905318 8089284 Dd703_3334 Dickeya dadantii Ech703 excinuclease ABC subunit C YP_002988918.1 3905016 D 579405 CDS YP_002988919.1 242240738 8089285 complement(3905305..3905808) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0724 acetyltransferase; N-acetyltransferase GCN5 3905808 8089285 Dd703_3335 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002988919.1 3905305 R 579405 CDS YP_002988920.1 242240739 8089286 complement(3905802..3906326) 1 NC_012880.1 PFAM: sterol-binding domain protein; KEGG: eca:ECA0723 sterol transferase; sterol-binding domain-containing protein 3906326 8089286 Dd703_3336 Dickeya dadantii Ech703 sterol-binding domain-containing protein YP_002988920.1 3905802 R 579405 CDS YP_002988921.1 242240740 8089287 3906672..3907667 1 NC_012880.1 PFAM: peptidase U32; KEGG: eca:ECA0722 protease; peptidase U32 3907667 8089287 Dd703_3337 Dickeya dadantii Ech703 peptidase U32 YP_002988921.1 3906672 D 579405 CDS YP_002988922.1 242240741 8089288 3907682..3908560 1 NC_012880.1 PFAM: peptidase U32; KEGG: yen:YE0449 hypothetical protein; peptidase U32 3908560 8089288 Dd703_3338 Dickeya dadantii Ech703 peptidase U32 YP_002988922.1 3907682 D 579405 CDS YP_002988923.1 242240742 8089289 3908770..3909789 1 NC_012880.1 PFAM: Luciferase-like monooxygenase; KEGG: yen:YE0442 hypothetical protein; hypothetical protein 3909789 8089289 Dd703_3339 Dickeya dadantii Ech703 hypothetical protein YP_002988923.1 3908770 D 579405 CDS YP_002988924.1 242240743 8089290 complement(3910230..3912095) 1 NC_012880.1 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 3912095 8089290 Dd703_3340 Dickeya dadantii Ech703 ATP-dependent RNA helicase DeaD YP_002988924.1 3910230 R 579405 CDS YP_002988925.1 242240744 8089291 complement(3912273..3913157) 1 NC_012880.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 3913157 8089291 Dd703_3341 Dickeya dadantii Ech703 lipoprotein NlpI YP_002988925.1 3912273 R 579405 CDS YP_002988926.1 242240745 8089292 complement(3913285..3915453) 1 NC_012880.1 KEGG: eca:ECA0716 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase 3915453 8089292 Dd703_3342 Dickeya dadantii Ech703 polynucleotide phosphorylase/polyadenylase YP_002988926.1 3913285 R 579405 CDS YP_002988927.1 242240746 8089293 complement(3915677..3915946) 1 NC_012880.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 3915946 rpsO 8089293 rpsO Dickeya dadantii Ech703 30S ribosomal protein S15 YP_002988927.1 3915677 R 579405 CDS YP_002988928.1 242240747 8089294 complement(3916057..3917013) 1 NC_012880.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: eca:ECA0714 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 3917013 8089294 Dd703_3344 Dickeya dadantii Ech703 tRNA pseudouridine synthase B YP_002988928.1 3916057 R 579405 CDS YP_002988929.1 242240748 8089295 complement(3917013..3917411) 1 NC_012880.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3917411 rbfA 8089295 rbfA Dickeya dadantii Ech703 ribosome-binding factor A YP_002988929.1 3917013 R 579405 CDS YP_002988930.1 242240749 8089296 complement(3917485..3920190) 1 NC_012880.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3920190 infB 8089296 infB Dickeya dadantii Ech703 translation initiation factor IF-2 YP_002988930.1 3917485 R 579405 CDS YP_002988931.1 242240750 8089297 complement(3920216..3921706) 1 NC_012880.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 3921706 nusA 8089297 nusA Dickeya dadantii Ech703 transcription elongation factor NusA YP_002988931.1 3920216 R 579405 CDS YP_002988932.1 242240751 8089298 complement(3921728..3922150) 1 NC_012880.1 PFAM: protein of unknown function DUF150; KEGG: eta:ETA_03450 YhbC-like protein; hypothetical protein 3922150 8089298 Dd703_3348 Dickeya dadantii Ech703 hypothetical protein YP_002988932.1 3921728 R 579405 CDS YP_002988933.1 242240752 8089301 complement(3922680..3923087) 1 NC_012880.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: eta:ETA_03440 protein-export membrane protein SecG (preprotein translocase band 1 subunit); preprotein translocase subunit SecG 3923087 8089301 Dd703_3349 Dickeya dadantii Ech703 preprotein translocase subunit SecG YP_002988933.1 3922680 R 579405 CDS YP_002988934.1 242240753 8089302 complement(3923311..3924648) 1 NC_012880.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3924648 glmM 8089302 glmM Dickeya dadantii Ech703 phosphoglucosamine mutase YP_002988934.1 3923311 R 579405 CDS YP_002988935.1 242240754 8089303 complement(3924660..3925493) 1 NC_012880.1 KEGG: yps:YPTB0475 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 3925493 8089303 Dd703_3351 Dickeya dadantii Ech703 dihydropteroate synthase YP_002988935.1 3924660 R 579405 CDS YP_002988936.1 242240755 8089304 complement(3925606..3927570) 1 NC_012880.1 KEGG: kpe:KPK_0533 ATP-dependent metallopeptidase HflB; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 3927570 8089304 Dd703_3352 Dickeya dadantii Ech703 ATP-dependent metalloprotease FtsH YP_002988936.1 3925606 R 579405 CDS YP_002988937.1 242240756 8089305 complement(3927618..3928247) 1 NC_012880.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 3928247 rrmJ 8089305 rrmJ Dickeya dadantii Ech703 23S rRNA methyltransferase J YP_002988937.1 3927618 R 579405 CDS YP_002988938.1 242240757 8089306 3928391..3928684 1 NC_012880.1 PFAM: protein of unknown function UPF0044; KEGG: eca:ECA0696 hypothetical protein; hypothetical protein 3928684 8089306 Dd703_3354 Dickeya dadantii Ech703 hypothetical protein YP_002988938.1 3928391 D 579405 CDS YP_002988939.1 242240758 8089307 complement(3928814..3929290) 1 NC_012880.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: eca:ECA0695 transcription elongation factor GreA; transcription elongation factor GreA 3929290 8089307 Dd703_3355 Dickeya dadantii Ech703 transcription elongation factor GreA YP_002988939.1 3928814 R 579405 CDS YP_002988940.1 242240759 8089308 3929553..3930992 1 NC_012880.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase 3930992 8089308 Dd703_3356 Dickeya dadantii Ech703 D-alanyl-D-alanine carboxypeptidase YP_002988940.1 3929553 D 579405 CDS YP_002988941.1 242240760 8089309 complement(3931097..3932275) 1 NC_012880.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3932275 obgE 8089309 obgE Dickeya dadantii Ech703 GTPase ObgE YP_002988941.1 3931097 R 579405 CDS YP_002988942.1 242240761 8089310 complement(3932510..3933430) 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA0692 hypothetical protein; hypothetical protein 3933430 8089310 Dd703_3358 Dickeya dadantii Ech703 hypothetical protein YP_002988942.1 3932510 R 579405 CDS YP_002988943.1 242240762 8089311 complement(3933528..3933785) 1 NC_012880.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: kpn:KPN_03595 50S ribosomal protein L27; 50S ribosomal protein L27 3933785 8089311 Dd703_3359 Dickeya dadantii Ech703 50S ribosomal protein L27 YP_002988943.1 3933528 R 579405 CDS YP_002988944.1 242240763 8089312 complement(3933805..3934116) 1 NC_012880.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: eca:ECA0690 50S ribosomal protein L21; 50S ribosomal protein L21 3934116 rplU 8089312 rplU Dickeya dadantii Ech703 50S ribosomal protein L21 YP_002988944.1 3933805 R 579405 CDS YP_002988945.1 242240764 8089313 3934382..3935353 1 NC_012880.1 PFAM: polyprenyl synthetase; KEGG: eca:ECA0689 octaprenyl diphosphate synthase; octaprenyl diphosphate synthase 3935353 8089313 Dd703_3361 Dickeya dadantii Ech703 octaprenyl diphosphate synthase YP_002988945.1 3934382 D 579405 CDS YP_002988946.1 242240765 8089314 complement(3935368..3935730) 1 NC_012880.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: eca:ECA0688 hypothetical protein; MuA-transposase/repressor protein CI 3935730 8089314 Dd703_3362 Dickeya dadantii Ech703 MuA-transposase/repressor protein CI YP_002988946.1 3935368 R 579405 CDS YP_002988947.1 242240766 8089315 complement(3935953..3936339) 1 NC_012880.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: eca:ECA0687 DNA-binding protein; MuA-transposase/repressor protein CI 3936339 8089315 Dd703_3363 Dickeya dadantii Ech703 MuA-transposase/repressor protein CI YP_002988947.1 3935953 R 579405 CDS YP_002988948.1 242240767 8089316 3936526..3936789 1 NC_012880.1 KEGG: eca:ECA0686 sugar fermentation stimulation protein; transcriptional regulator Nlp 3936789 8089316 Dd703_3364 Dickeya dadantii Ech703 transcriptional regulator Nlp YP_002988948.1 3936526 D 579405 CDS YP_002988949.1 242240768 8089317 complement(3936865..3937803) 1 NC_012880.1 oxidizes malate to oxaloacetate; malate dehydrogenase 3937803 8089317 Dd703_3365 Dickeya dadantii Ech703 malate dehydrogenase YP_002988949.1 3936865 R 579405 CDS YP_002988950.1 242240769 8089318 3938271..3938741 1 NC_012880.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 3938741 8089318 Dd703_3366 Dickeya dadantii Ech703 arginine repressor YP_002988950.1 3938271 D 579405 CDS YP_002988951.1 242240770 8089319 complement(3938889..3939902) 1 NC_012880.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 3939902 8089319 Dd703_3367 Dickeya dadantii Ech703 DNA-binding/iron metalloprotein/AP endonuclease YP_002988951.1 3938889 R 579405 CDS YP_002988952.1 242240771 8089320 3940131..3940346 1 NC_012880.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3940346 rpsU 8089320 rpsU Dickeya dadantii Ech703 30S ribosomal protein S21 YP_002988952.1 3940131 D 579405 CDS YP_002988953.1 242240772 8089321 3940466..3942220 1 NC_012880.1 synthesizes RNA primers at the replication forks; DNA primase 3942220 dnaG 8089321 dnaG Dickeya dadantii Ech703 DNA primase YP_002988953.1 3940466 D 579405 CDS YP_002988954.1 242240773 8089322 3942376..3944214 1 NC_012880.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3944214 8089322 Dd703_3370 Dickeya dadantii Ech703 RNA polymerase sigma factor RpoD YP_002988954.1 3942376 D 579405 CDS YP_002988955.1 242240774 8089324 complement(3944635..3945696) 1 NC_012880.1 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 3945696 8089324 Dd703_3371 Dickeya dadantii Ech703 thiamine biosynthesis lipoprotein ApbE YP_002988955.1 3944635 R 579405 CDS YP_002988956.1 242240775 8089325 complement(3945870..3946871) 1 NC_012880.1 KEGG: kpn:KPN_00568 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3946871 8089325 Dd703_3372 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002988956.1 3945870 R 579405 CDS YP_002988957.1 242240776 8089326 complement(3946861..3947907) 1 NC_012880.1 KEGG: kpe:KPK_4018 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3947907 8089326 Dd703_3373 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002988957.1 3946861 R 579405 CDS YP_002988958.1 242240777 8089327 complement(3947911..3948801) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpe:KPK_4019 oligopeptide/dipeptide ABC transporter permease; binding-protein-dependent transporters inner membrane component 3948801 8089327 Dd703_3374 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988958.1 3947911 R 579405 CDS YP_002988959.1 242240778 8089328 complement(3948807..3949760) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpe:KPK_4020 oligopeptide/dipeptide ABC transporter permease; binding-protein-dependent transporters inner membrane component 3949760 8089328 Dd703_3375 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002988959.1 3948807 R 579405 CDS YP_002988960.1 242240779 8089329 complement(3949807..3951465) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: kpe:KPK_4021 oligopeptide/dipeptide ABC transporter periplasmic oligopeptide/dipeptide-binding protein; family 5 extracellular solute-binding protein 3951465 8089329 Dd703_3376 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002988960.1 3949807 R 579405 CDS YP_002988961.1 242240780 8089330 complement(3952106..3952579) 1 NC_012880.1 PFAM: protein of unknown function Spy-related; KEGG: kpn:KPN_01226 periplasmic protein; hypothetical protein 3952579 8089330 Dd703_3377 Dickeya dadantii Ech703 hypothetical protein YP_002988961.1 3952106 R 579405 CDS YP_002988962.1 242240781 8089331 complement(3952809..3953753) 1 NC_012880.1 PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: eca:ECA1499 pectin lyase; Pectate lyase/Amb allergen 3953753 8089331 Dd703_3378 Dickeya dadantii Ech703 Pectate lyase/Amb allergen YP_002988962.1 3952809 R 579405 CDS YP_002988963.1 242240782 8089332 complement(3954147..3954443) 1 NC_012880.1 KEGG: eca:ECA0656 hypothetical protein; hypothetical protein 3954443 8089332 Dd703_3379 Dickeya dadantii Ech703 hypothetical protein YP_002988963.1 3954147 R 579405 CDS YP_002988964.1 242240783 8089333 complement(3954562..3955704) 1 NC_012880.1 PFAM: methyltransferase small; KEGG: eca:ECA0654 hypothetical protein; rRNA (guanine-N(2)-)-methyltransferase 3955704 8089333 Dd703_3380 Dickeya dadantii Ech703 rRNA (guanine-N(2)-)-methyltransferase YP_002988964.1 3954562 R 579405 CDS YP_002988965.1 242240784 8089334 3956083..3957042 1 NC_012880.1 PFAM: integral membrane protein TerC; KEGG: eca:ECA0652 hypothetical protein; integral membrane protein TerC 3957042 8089334 Dd703_3381 Dickeya dadantii Ech703 integral membrane protein TerC YP_002988965.1 3956083 D 579405 CDS YP_002988966.1 242240785 8089335 complement(3957104..3957649) 1 NC_012880.1 KEGG: eca:ECA0648 hypothetical protein; hypothetical protein 3957649 8089335 Dd703_3382 Dickeya dadantii Ech703 hypothetical protein YP_002988966.1 3957104 R 579405 CDS YP_002988967.1 242240786 8089336 complement(3957737..3959227) 1 NC_012880.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; KEGG: eca:ECA0647 altronate hydrolase; altronate dehydratase 3959227 8089336 Dd703_3383 Dickeya dadantii Ech703 altronate dehydratase YP_002988967.1 3957737 R 579405 CDS YP_002988968.1 242240787 8089337 complement(3959246..3960697) 1 NC_012880.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 3960697 8089337 Dd703_3384 Dickeya dadantii Ech703 altronate oxidoreductase YP_002988968.1 3959246 R 579405 CDS YP_002988969.1 242240788 8089338 complement(3960862..3962271) 1 NC_012880.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3962271 8089338 Dd703_3385 Dickeya dadantii Ech703 glucuronate isomerase YP_002988969.1 3960862 R 579405 CDS YP_002988970.1 242240789 8089339 3962811..3964115 1 NC_012880.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0644 galacturonate transporter; d-galactonate transporter 3964115 8089339 Dd703_3386 Dickeya dadantii Ech703 d-galactonate transporter YP_002988970.1 3962811 D 579405 CDS YP_002988971.1 242240790 8089340 3964342..3965118 1 NC_012880.1 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR 3965118 8089340 Dd703_3387 Dickeya dadantii Ech703 DNA-binding transcriptional repressor ExuR YP_002988971.1 3964342 D 579405 CDS YP_002988972.1 242240791 8089341 3965646..3966320 1 NC_012880.1 PFAM: SNARE associated Golgi protein; KEGG: eca:ECA0642 DedA family membrane protein; hypothetical protein 3966320 8089341 Dd703_3388 Dickeya dadantii Ech703 hypothetical protein YP_002988972.1 3965646 D 579405 CDS YP_002988973.1 242240792 8089342 3966323..3966697 1 NC_012880.1 KEGG: eca:ECA0641 hypothetical protein; hypothetical protein 3966697 8089342 Dd703_3389 Dickeya dadantii Ech703 hypothetical protein YP_002988973.1 3966323 D 579405 CDS YP_002988974.1 242240793 8089343 3966985..3967290 1 NC_012880.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: eca:ECA0639 hypothetical protein; hypothetical protein 3967290 8089343 Dd703_3390 Dickeya dadantii Ech703 hypothetical protein YP_002988974.1 3966985 D 579405 CDS YP_002988975.1 242240794 8089344 3967297..3967692 1 NC_012880.1 KEGG: eca:ECA0638 hypothetical protein; hypothetical protein 3967692 8089344 Dd703_3391 Dickeya dadantii Ech703 hypothetical protein YP_002988975.1 3967297 D 579405 CDS YP_002988976.1 242240795 8089345 3967689..3967976 1 NC_012880.1 KEGG: yen:YE3717 hypothetical protein; hypothetical protein 3967976 8089345 Dd703_3392 Dickeya dadantii Ech703 hypothetical protein YP_002988976.1 3967689 D 579405 CDS YP_002988977.1 242240796 8089346 3968144..3968539 1 NC_012880.1 PFAM: DoxX family protein; KEGG: eca:ECA0636 hypothetical protein; DoxX family protein 3968539 8089346 Dd703_3393 Dickeya dadantii Ech703 DoxX family protein YP_002988977.1 3968144 D 579405 CDS YP_002988978.1 242240797 8089347 3968627..3969607 1 NC_012880.1 PFAM: glutathione S-transferase domain; KEGG: eca:ECA0635 hypothetical protein; glutathione transferase 3969607 8089347 Dd703_3394 Dickeya dadantii Ech703 glutathione transferase YP_002988978.1 3968627 D 579405 CDS YP_002988979.1 242240798 8089348 complement(3969719..3970615) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: esa:ESA_03530 hypothetical protein; LysR family transcriptional regulator 3970615 8089348 Dd703_3395 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002988979.1 3969719 R 579405 CDS YP_002988980.1 242240799 8089349 3970727..3971428 1 NC_012880.1 PFAM: pirin; KEGG: eca:ECA0633 hypothetical protein; pirin 3971428 8089349 Dd703_3396 Dickeya dadantii Ech703 pirin YP_002988980.1 3970727 D 579405 CDS YP_002988981.1 242240800 8089350 3971541..3972050 1 NC_012880.1 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor 3972050 8089350 Dd703_3397 Dickeya dadantii Ech703 zinc uptake transcriptional repressor YP_002988981.1 3971541 D 579405 CDS YP_002988982.1 242240801 8089351 complement(3972201..3972812) 1 NC_012880.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 3972812 8089351 Dd703_3398 Dickeya dadantii Ech703 LexA repressor YP_002988982.1 3972201 R 579405 CDS YP_002988983.1 242240802 8089352 complement(3972923..3973288) 1 NC_012880.1 PFAM: diacylglycerol kinase; KEGG: eca:ECA0629 diacylglycerol kinase; diacylglycerol kinase 3973288 8089352 Dd703_3399 Dickeya dadantii Ech703 diacylglycerol kinase YP_002988983.1 3972923 R 579405 CDS YP_002988984.1 242240803 8089353 3973417..3975900 1 NC_012880.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 3975900 8089353 Dd703_3400 Dickeya dadantii Ech703 glycerol-3-phosphate acyltransferase YP_002988984.1 3973417 D 579405 CDS YP_002988985.1 242240804 8089354 complement(3975984..3976847) 1 NC_012880.1 catalyzes the conversion of 4-hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 3976847 ubiA 8089354 ubiA Dickeya dadantii Ech703 4-hydroxybenzoate octaprenyltransferase YP_002988985.1 3975984 R 579405 CDS YP_002988986.1 242240805 8089355 complement(3976870..3977385) 1 NC_012880.1 PFAM: chorismate lyase; KEGG: eca:ECA0626 chorismate pyruvate lyase; chorismate lyase 3977385 8089355 Dd703_3402 Dickeya dadantii Ech703 chorismate lyase YP_002988986.1 3976870 R 579405 CDS YP_002988987.1 242240806 8089356 complement(3977685..3979331) 1 NC_012880.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: kpe:KPK_5137 chaperonin GroL; chaperonin GroEL 3979331 8089356 Dd703_3403 Dickeya dadantii Ech703 chaperonin GroEL YP_002988987.1 3977685 R 579405 CDS YP_002988988.1 242240807 8089357 complement(3979382..3979675) 1 NC_012880.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 3979675 groES 8089357 groES Dickeya dadantii Ech703 co-chaperonin GroES YP_002988988.1 3979382 R 579405 CDS YP_002988989.1 242240808 8089358 complement(3979923..3980396) 1 NC_012880.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: eca:ECA0623 suppressor of F plamsid exlusion of phage T7; FxsA cytoplasmic membrane protein 3980396 8089358 Dd703_3405 Dickeya dadantii Ech703 FxsA cytoplasmic membrane protein YP_002988989.1 3979923 R 579405 CDS YP_002988990.1 242240809 8089359 complement(3980565..3980729) 1 NC_012880.1 hypothetical protein 3980729 8089359 Dd703_3406 Dickeya dadantii Ech703 hypothetical protein YP_002988990.1 3980565 R 579405 CDS YP_002988991.1 242240810 8089360 3980804..3982243 1 NC_012880.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 3982243 aspA 8089360 aspA Dickeya dadantii Ech703 aspartate ammonia-lyase YP_002988991.1 3980804 D 579405 CDS YP_002988992.1 242240811 8089361 3982383..3983684 1 NC_012880.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 3983684 8089361 Dd703_3408 Dickeya dadantii Ech703 anaerobic C4-dicarboxylate transporter YP_002988992.1 3982383 D 579405 CDS YP_002988993.1 242240812 8089362 3983791..3984123 1 NC_012880.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA 3984123 8089362 Dd703_3409 Dickeya dadantii Ech703 divalent-cation tolerance protein CutA YP_002988993.1 3983791 D 579405 CDS YP_002988994.1 242240813 8089363 3984099..3985811 1 NC_012880.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 3985811 dipZ 8089363 dipZ Dickeya dadantii Ech703 thiol:disulfide interchange protein YP_002988994.1 3984099 D 579405 CDS YP_002988995.1 242240814 8089364 3985896..3986471 1 NC_012880.1 PFAM: regulatory protein TetR; KEGG: yps:YPTB0395 transcriptional regulator; transcriptional regulator 3986471 8089364 Dd703_3411 Dickeya dadantii Ech703 transcriptional regulator YP_002988995.1 3985896 D 579405 CDS YP_002988996.1 242240815 8089366 3987035..3988309 1 NC_012880.1 PFAM: integrase family protein; KEGG: stt:t4371 bacteriophage integrase; integrase family protein 3988309 8089366 Dd703_3412 Dickeya dadantii Ech703 integrase family protein YP_002988996.1 3987035 D 579405 CDS YP_002988997.1 242240816 8089367 complement(3988450..3988620) 1 NC_012880.1 KEGG: ecq:ECED1_1795 conserved hypothetical protein; repressor (interpro); hypothetical protein 3988620 8089367 Dd703_3413 Dickeya dadantii Ech703 hypothetical protein YP_002988997.1 3988450 R 579405 CDS YP_002988998.1 242240817 8089368 3988761..3989111 1 NC_012880.1 KEGG: plu:plu1097 hypothetical protein; hypothetical protein 3989111 8089368 Dd703_3414 Dickeya dadantii Ech703 hypothetical protein YP_002988998.1 3988761 D 579405 CDS YP_002988999.1 242240818 8089369 3990007..3990750 1 NC_012880.1 KEGG: eum:ECUMN_2300 MobC mobilization protein; MobC mobilization protein 3990750 8089369 Dd703_3415 Dickeya dadantii Ech703 MobC mobilization protein YP_002988999.1 3990007 D 579405 CDS YP_002989000.1 242240819 8089370 3990809..3991027 1 NC_012880.1 PFAM: Post-segregation antitoxin CcdA; KEGG: eca:ECA0511 plasmid maintenance protein CcdA; plasmid maintenance protein CcdA 3991027 8089370 Dd703_3416 Dickeya dadantii Ech703 plasmid maintenance protein CcdA YP_002989000.1 3990809 D 579405 CDS YP_002989001.1 242240820 8089371 3991030..3991335 1 NC_012880.1 controlled cell death protein; post-segregation toxin; toxin addiction system; plasmid maintenance protein CcdB 3991335 8089371 Dd703_3417 Dickeya dadantii Ech703 plasmid maintenance protein CcdB YP_002989001.1 3991030 D 579405 CDS YP_002989002.1 242240821 8089372 complement(3991477..3992475) 1 NC_012880.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: sil:SPO1047 RNA-dependent DNA polymerase; RNA-directed DNA polymerase 3992475 8089372 Dd703_3418 Dickeya dadantii Ech703 RNA-directed DNA polymerase YP_002989002.1 3991477 R 579405 CDS YP_002989003.1 242240822 8089373 complement(3992646..3993383) 1 NC_012880.1 KEGG: sil:SPO1046 hypothetical protein; hypothetical protein 3993383 8089373 Dd703_3419 Dickeya dadantii Ech703 hypothetical protein YP_002989003.1 3992646 R 579405 CDS YP_002989004.1 242240823 8089374 complement(3993373..3993900) 1 NC_012880.1 KEGG: sil:SPO1045 hypothetical protein; hypothetical protein 3993900 8089374 Dd703_3420 Dickeya dadantii Ech703 hypothetical protein YP_002989004.1 3993373 R 579405 CDS YP_002989005.1 242240824 8089375 complement(3994531..3994869) 1 NC_012880.1 KEGG: plu:plu0625 hypothetical protein; hypothetical protein 3994869 8089375 Dd703_3421 Dickeya dadantii Ech703 hypothetical protein YP_002989005.1 3994531 R 579405 CDS YP_002989006.1 242240825 8089376 complement(3994882..3995148) 1 NC_012880.1 KEGG: yen:YE0485 hypothetical protein; hypothetical protein 3995148 8089376 Dd703_3422 Dickeya dadantii Ech703 hypothetical protein YP_002989006.1 3994882 R 579405 CDS YP_002989007.1 242240826 8089378 complement(3996122..3996337) 1 NC_012880.1 hypothetical protein 3996337 8089378 Dd703_3424 Dickeya dadantii Ech703 hypothetical protein YP_002989007.1 3996122 R 579405 CDS YP_002989008.1 242240827 8089379 3996456..3996716 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ses:SARI_03129 hypothetical protein; XRE family transcriptional regulator 3996716 8089379 Dd703_3425 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002989008.1 3996456 D 579405 CDS YP_002989009.1 242240828 8089380 3996772..3997359 1 NC_012880.1 hypothetical protein 3997359 8089380 Dd703_3426 Dickeya dadantii Ech703 hypothetical protein YP_002989009.1 3996772 D 579405 CDS YP_002989010.1 242240829 8089381 3997463..3998761 1 NC_012880.1 KEGG: sdn:Sden_3310 hypothetical protein; hypothetical protein 3998761 8089381 Dd703_3427 Dickeya dadantii Ech703 hypothetical protein YP_002989010.1 3997463 D 579405 CDS YP_002989011.1 242240830 8089382 complement(3999004..4000146) 1 NC_012880.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: eca:ECA0515 hypothetical protein; filamentation induced by cAMP protein fic 4000146 8089382 Dd703_3428 Dickeya dadantii Ech703 filamentation induced by cAMP protein fic YP_002989011.1 3999004 R 579405 CDS YP_002989012.1 242240831 8089383 complement(4000385..4000879) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stt:t4359 hypothetical protein; N-acetyltransferase GCN5 4000879 8089383 Dd703_3429 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002989012.1 4000385 R 579405 CDS YP_002989013.1 242240832 8089384 complement(4000876..4001169) 1 NC_012880.1 PFAM: protein of unknown function DUF1778; KEGG: eca:ECA0958 hypothetical protein; hypothetical protein 4001169 8089384 Dd703_3430 Dickeya dadantii Ech703 hypothetical protein YP_002989013.1 4000876 R 579405 CDS YP_002989014.1 242240833 8089385 4001447..4002166 1 NC_012880.1 KEGG: plu:plu1482 hypothetical protein; hypothetical protein 4002166 8089385 Dd703_3431 Dickeya dadantii Ech703 hypothetical protein YP_002989014.1 4001447 D 579405 CDS YP_002989015.1 242240834 8089386 4002159..4002812 1 NC_012880.1 PFAM: RES domain protein; KEGG: plu:plu1483 hypothetical protein; RES domain-containing protein 4002812 8089386 Dd703_3432 Dickeya dadantii Ech703 RES domain-containing protein YP_002989015.1 4002159 D 579405 CDS YP_002989016.1 242240835 8089388 4003683..4003967 1 NC_012880.1 PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1405 DNA-binding protein; hypothetical protein 4003967 8089388 Dd703_3434 Dickeya dadantii Ech703 hypothetical protein YP_002989016.1 4003683 D 579405 CDS YP_002989017.1 242240836 8089389 4004079..4004576 1 NC_012880.1 KEGG: sfr:Sfri_1975 hypothetical protein; hypothetical protein 4004576 8089389 Dd703_3435 Dickeya dadantii Ech703 hypothetical protein YP_002989017.1 4004079 D 579405 CDS YP_002989018.1 242240837 8089390 complement(4004647..4005243) 1 NC_012880.1 PFAM: methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; methyltransferase type 11; KEGG: mxa:MXAN_4322 thiopurine S-methyltransferase; type 12 methyltransferase 4005243 8089390 Dd703_3436 Dickeya dadantii Ech703 type 12 methyltransferase YP_002989018.1 4004647 R 579405 CDS YP_002989019.1 242240838 8089391 4005516..4006979 1 NC_012880.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: hypothetical protein; PKD domain-containing protein 4006979 8089391 Dd703_3437 Dickeya dadantii Ech703 PKD domain-containing protein YP_002989019.1 4005516 D 579405 CDS YP_002989020.1 242240839 8089392 complement(4007090..4007911) 1 NC_012880.1 PFAM: NLPA lipoprotein; KEGG: eca:ECA2066 lipoprotein; NLPA lipoprotein 4007911 8089392 Dd703_3438 Dickeya dadantii Ech703 NLPA lipoprotein YP_002989020.1 4007090 R 579405 CDS YP_002989021.1 242240840 8089393 4008420..4008974 1 NC_012880.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bph:Bphy_4090 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 4008974 8089393 Dd703_3439 Dickeya dadantii Ech703 ECF subfamily RNA polymerase sigma-24 subunit YP_002989021.1 4008420 D 579405 CDS YP_002989022.1 242240841 8089394 4008971..4009396 1 NC_012880.1 KEGG: bac:BamMC406_4380 hypothetical protein; hypothetical protein 4009396 8089394 Dd703_3440 Dickeya dadantii Ech703 hypothetical protein YP_002989022.1 4008971 D 579405 CDS YP_002989023.1 242240842 8089395 4009393..4009896 1 NC_012880.1 KEGG: bpy:Bphyt_5023 membrane-associated protein; membrane-associated protein 4009896 8089395 Dd703_3441 Dickeya dadantii Ech703 membrane-associated protein YP_002989023.1 4009393 D 579405 CDS YP_002989024.1 242240843 8089396 4009988..4011478 1 NC_012880.1 PFAM: hypothetical protein; KEGG: bph:Bphy_4087 hypothetical protein; hypothetical protein 4011478 8089396 Dd703_3442 Dickeya dadantii Ech703 hypothetical protein YP_002989024.1 4009988 D 579405 CDS YP_002989025.1 242240844 8089397 4011482..4012642 1 NC_012880.1 PFAM: protein of unknown function DUF1501; KEGG: bph:Bphy_4086 hypothetical protein; hypothetical protein 4012642 8089397 Dd703_3443 Dickeya dadantii Ech703 hypothetical protein YP_002989025.1 4011482 D 579405 CDS YP_002989026.1 242240845 8089398 complement(4012730..4013164) 1 NC_012880.1 KEGG: dar:Daro_2256 MerR family transcriptional regulator; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 4013164 8089398 Dd703_3444 Dickeya dadantii Ech703 MerR family transcriptional regulator YP_002989026.1 4012730 R 579405 CDS YP_002989027.1 242240846 8089399 4013233..4015623 1 NC_012880.1 TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A4439 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; ATPase P 4015623 8089399 Dd703_3445 Dickeya dadantii Ech703 ATPase P YP_002989027.1 4013233 D 579405 CDS YP_002989028.1 242240847 8089400 complement(4015657..4016964) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: spe:Spro_3902 major facilitator transporter; major facilitator superfamily protein 4016964 8089400 Dd703_3446 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002989028.1 4015657 R 579405 CDS YP_002989029.1 242240848 8089401 complement(4016961..4017614) 1 NC_012880.1 KEGG: spe:Spro_3903 hypothetical protein; hypothetical protein 4017614 8089401 Dd703_3447 Dickeya dadantii Ech703 hypothetical protein YP_002989029.1 4016961 R 579405 CDS YP_002989030.1 242240849 8089402 complement(4017676..4019019) 1 NC_012880.1 PFAM: amidase; KEGG: spe:Spro_3904 amidase; amidase 4019019 8089402 Dd703_3448 Dickeya dadantii Ech703 amidase YP_002989030.1 4017676 R 579405 CDS YP_002989031.1 242240850 8089403 complement(4019029..4019721) 1 NC_012880.1 KEGG: spe:Spro_3905 hypothetical protein; hypothetical protein 4019721 8089403 Dd703_3449 Dickeya dadantii Ech703 hypothetical protein YP_002989031.1 4019029 R 579405 CDS YP_002989032.1 242240851 8089404 4019826..4020521 1 NC_012880.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: spe:Spro_3906 GntR family transcriptional regulator; GntR family transcriptional regulator 4020521 8089404 Dd703_3450 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002989032.1 4019826 D 579405 CDS YP_002989033.1 242240852 8089405 complement(4020551..4021198) 1 NC_012880.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: bja:blr7948 acetyltransferase; phosphonate metabolism protein 4021198 8089405 Dd703_3451 Dickeya dadantii Ech703 phosphonate metabolism protein YP_002989033.1 4020551 R 579405 CDS YP_002989034.1 242240853 8089406 4021392..4022243 1 NC_012880.1 PFAM: Domain of unknown function DUF1868; KEGG: met:M446_0509 hypothetical protein; hypothetical protein 4022243 8089406 Dd703_3452 Dickeya dadantii Ech703 hypothetical protein YP_002989034.1 4021392 D 579405 CDS YP_002989035.1 242240854 8089407 complement(4022458..4024026) 1 NC_012880.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA3941 alkyl hydroperoxide reductase subunit F; alkyl hydroperoxide reductase 4024026 8089407 Dd703_3453 Dickeya dadantii Ech703 alkyl hydroperoxide reductase YP_002989035.1 4022458 R 579405 CDS YP_002989036.1 242240855 8089408 complement(4024101..4024664) 1 NC_012880.1 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C 4024664 8089408 Dd703_3454 Dickeya dadantii Ech703 alkyl hydroperoxide reductase subunit C YP_002989036.1 4024101 R 579405 CDS YP_002989037.1 242240856 8089409 4024985..4025218 1 NC_012880.1 KEGG: spe:Spro_3158 hypothetical protein; hypothetical protein 4025218 8089409 Dd703_3455 Dickeya dadantii Ech703 hypothetical protein YP_002989037.1 4024985 D 579405 CDS YP_002989038.1 242240857 8089410 complement(4025242..4026408) 1 NC_012880.1 KEGG: kpe:KPK_2239 amidohydrolase family protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 4026408 8089410 Dd703_3456 Dickeya dadantii Ech703 amidohydrolase YP_002989038.1 4025242 R 579405 CDS YP_002989039.1 242240858 8089411 complement(4026805..4027428) 1 NC_012880.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: spe:Spro_0128 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4027428 8089411 Dd703_3457 Dickeya dadantii Ech703 metal dependent phosphohydrolase YP_002989039.1 4026805 R 579405 CDS YP_002989040.1 242240859 8089412 complement(4028168..4029898) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA1683 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4029898 8089412 Dd703_3458 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989040.1 4028168 R 579405 CDS YP_002989041.1 242240860 8089413 complement(4030218..4030961) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: atc:AGR_C_1580 hypothetical protein; short-chain dehydrogenase/reductase SDR 4030961 8089413 Dd703_3459 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002989041.1 4030218 R 579405 CDS YP_002989042.1 242240861 8089414 complement(4031136..4031855) 1 NC_012880.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: eca:ECA0474 enterobactin synthetase component D (4'-phosphopantetheinyl transferase); 4'-phosphopantetheinyl transferase 4031855 8089414 Dd703_3460 Dickeya dadantii Ech703 4'-phosphopantetheinyl transferase YP_002989042.1 4031136 R 579405 CDS YP_002989043.1 242240862 8089415 complement(4032101..4032373) 1 NC_012880.1 hypothetical protein 4032373 8089415 Dd703_3461 Dickeya dadantii Ech703 hypothetical protein YP_002989043.1 4032101 R 579405 CDS YP_002989044.1 242240863 8089416 complement(4032699..4033535) 1 NC_012880.1 PFAM: TatD-related deoxyribonuclease; KEGG: eca:ECA0472 TatD family deoxyribonuclease; TatD-related deoxyribonuclease 4033535 8089416 Dd703_3462 Dickeya dadantii Ech703 TatD-related deoxyribonuclease YP_002989044.1 4032699 R 579405 CDS YP_002989045.1 242240864 8089417 complement(4033547..4033735) 1 NC_012880.1 KEGG: eca:ECA0471 hypothetical protein; hypothetical protein 4033735 8089417 Dd703_3463 Dickeya dadantii Ech703 hypothetical protein YP_002989045.1 4033547 R 579405 CDS YP_002989046.1 242240865 8089418 complement(4033928..4034089) 1 NC_012880.1 PFAM: protein of unknown function DUF1328; KEGG: sgl:SG0393 hypothetical protein; hypothetical protein 4034089 8089418 Dd703_3464 Dickeya dadantii Ech703 hypothetical protein YP_002989046.1 4033928 R 579405 CDS YP_002989047.1 242240866 8089419 complement(4034130..4034738) 1 NC_012880.1 PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: eca:ECA0469 periplasmic protein; hypothetical protein 4034738 8089419 Dd703_3465 Dickeya dadantii Ech703 hypothetical protein YP_002989047.1 4034130 R 579405 CDS YP_002989048.1 242240867 8089420 complement(4035069..4036658) 1 NC_012880.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: eca:ECA0468 peptide chain release factor 3; peptide chain release factor 3 4036658 8089420 Dd703_3466 Dickeya dadantii Ech703 peptide chain release factor 3 YP_002989048.1 4035069 R 579405 CDS YP_002989049.1 242240868 8089421 4037120..4037893 1 NC_012880.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: kpe:KPK_2732 trans-aconitate 2-methyltransferase; trans-aconitate 2-methyltransferase 4037893 8089421 Dd703_3467 Dickeya dadantii Ech703 trans-aconitate 2-methyltransferase YP_002989049.1 4037120 D 579405 CDS YP_002989050.1 242240869 8089422 complement(4037904..4038575) 1 NC_012880.1 KEGG: eca:ECA0466 hypothetical protein; hypothetical protein 4038575 8089422 Dd703_3468 Dickeya dadantii Ech703 hypothetical protein YP_002989050.1 4037904 R 579405 CDS YP_002989051.1 242240870 8089423 4038716..4039693 1 NC_012880.1 catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 4039693 serB 8089423 serB Dickeya dadantii Ech703 phosphoserine phosphatase YP_002989051.1 4038716 D 579405 CDS YP_002989052.1 242240871 8089424 4039706..4041091 1 NC_012880.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 4041091 8089424 Dd703_3470 Dickeya dadantii Ech703 DNA repair protein RadA YP_002989052.1 4039706 D 579405 CDS YP_002989053.1 242240872 8089425 4041160..4042419 1 NC_012880.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 4042419 8089425 Dd703_3471 Dickeya dadantii Ech703 nicotinamide-nucleotide adenylyltransferase YP_002989053.1 4041160 D 579405 CDS YP_002989054.1 242240873 8089426 complement(4042404..4043015) 1 NC_012880.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: eca:ECA0462 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 4043015 8089426 Dd703_3472 Dickeya dadantii Ech703 5-formyltetrahydrofolate cyclo-ligase YP_002989054.1 4042404 R 579405 CDS YP_002989055.1 242240874 8089428 complement(4043323..4043652) 1 NC_012880.1 PFAM: protein of unknown function DUF710; KEGG: eca:ECA0461 Z-ring-associated protein; Z-ring-associated protein 4043652 8089428 Dd703_3473 Dickeya dadantii Ech703 Z-ring-associated protein YP_002989055.1 4043323 R 579405 CDS YP_002989056.1 242240875 8089429 4043837..4044427 1 NC_012880.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein 4044427 8089429 Dd703_3474 Dickeya dadantii Ech703 hypothetical protein YP_002989056.1 4043837 D 579405 CDS YP_002989057.1 242240876 8089430 4044464..4045789 1 NC_012880.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II 4045789 8089430 Dd703_3475 Dickeya dadantii Ech703 proline aminopeptidase P II YP_002989057.1 4044464 D 579405 CDS YP_002989058.1 242240877 8089431 4045786..4046964 1 NC_012880.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase 4046964 8089431 Dd703_3476 Dickeya dadantii Ech703 2-octaprenyl-6-methoxyphenyl hydroxylase YP_002989058.1 4045786 D 579405 CDS YP_002989059.1 242240878 8089432 4046993..4048201 1 NC_012880.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: eca:ECA0457 hypothetical protein; hypothetical protein 4048201 8089432 Dd703_3477 Dickeya dadantii Ech703 hypothetical protein YP_002989059.1 4046993 D 579405 CDS YP_002989060.1 242240879 8089433 4048729..4049271 1 NC_012880.1 PFAM: protein of unknown function DUF1440; KEGG: cje:Cj0014c integral membrane protein; hypothetical protein 4049271 8089433 Dd703_3478 Dickeya dadantii Ech703 hypothetical protein YP_002989060.1 4048729 D 579405 CDS YP_002989061.1 242240880 8089434 4049514..4051139 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0448 ABC transporter extracellular solute binding protein; family 5 extracellular solute-binding protein 4051139 8089434 Dd703_3479 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002989061.1 4049514 D 579405 CDS YP_002989062.1 242240881 8089435 4051117..4052082 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0447 ABC transporter permease; binding-protein-dependent transporters inner membrane component 4052082 8089435 Dd703_3480 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002989062.1 4051117 D 579405 CDS YP_002989063.1 242240882 8089436 4052072..4052935 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0446 ABC transporter permease; binding-protein-dependent transporters inner membrane component 4052935 8089436 Dd703_3481 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002989063.1 4052072 D 579405 CDS YP_002989064.1 242240883 8089437 4052932..4054623 1 NC_012880.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: eca:ECA0445 ABC transporter ATP binding protein; ABC transporter 4054623 8089437 Dd703_3482 Dickeya dadantii Ech703 ABC transporter YP_002989064.1 4052932 D 579405 CDS YP_002989065.1 242240884 8089438 complement(4054597..4055487) 1 NC_012880.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA0442 L-rhamnose operon transcriptional activator; AraC family transcriptional regulator 4055487 8089438 Dd703_3483 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002989065.1 4054597 R 579405 CDS YP_002989066.1 242240885 8089439 complement(4055560..4056405) 1 NC_012880.1 activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 4056405 8089439 Dd703_3484 Dickeya dadantii Ech703 transcriptional activator RhaS YP_002989066.1 4055560 R 579405 CDS YP_002989067.1 242240886 8089440 4056740..4058212 1 NC_012880.1 catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase 4058212 rhaB 8089440 rhaB Dickeya dadantii Ech703 rhamnulokinase YP_002989067.1 4056740 D 579405 CDS YP_002989068.1 242240887 8089441 4058209..4059465 1 NC_012880.1 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 4059465 8089441 Dd703_3486 Dickeya dadantii Ech703 L-rhamnose isomerase YP_002989068.1 4058209 D 579405 CDS YP_002989069.1 242240888 8089442 4059479..4060303 1 NC_012880.1 KEGG: eca:ECA0438 rhamnulose-1-phosphate aldolase; TIGRFAM: rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; rhamnulose-1-phosphate aldolase 4060303 8089442 Dd703_3487 Dickeya dadantii Ech703 rhamnulose-1-phosphate aldolase YP_002989069.1 4059479 D 579405 CDS YP_002989070.1 242240889 8089443 4060368..4060682 1 NC_012880.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: eca:ECA0437 hypothetical protein; L-rhamnose 1-epimerase 4060682 8089443 Dd703_3488 Dickeya dadantii Ech703 L-rhamnose 1-epimerase YP_002989070.1 4060368 D 579405 CDS YP_002989071.1 242240890 8089444 4061247..4062839 1 NC_012880.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA0436 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4062839 8089444 Dd703_3489 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989071.1 4061247 D 579405 CDS YP_002989072.1 242240891 8089445 complement(4062969..4063634) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: wsu:WS0977 oligopeptide transport ATP-binding protein AppF; ABC transporter 4063634 8089445 Dd703_3490 Dickeya dadantii Ech703 ABC transporter YP_002989072.1 4062969 R 579405 CDS YP_002989073.1 242240892 8089446 complement(4063624..4064475) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sil:SPO1213 oligopeptide ABC transporter ATP-binding protein; ABC transporter 4064475 8089446 Dd703_3491 Dickeya dadantii Ech703 ABC transporter YP_002989073.1 4063624 R 579405 CDS YP_002989074.1 242240893 8089447 complement(4064563..4065273) 1 NC_012880.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: plu:plu0518 hypothetical protein; metal dependent phosphohydrolase 4065273 8089447 Dd703_3492 Dickeya dadantii Ech703 metal dependent phosphohydrolase YP_002989074.1 4064563 R 579405 CDS YP_002989075.1 242240894 8089448 4065473..4066795 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: pmr:PMI3395 MFS-family transporter; major facilitator superfamily protein 4066795 8089448 Dd703_3493 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002989075.1 4065473 D 579405 CDS YP_002989076.1 242240895 8089450 4067261..4067791 1 NC_012880.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 4067791 8089450 Dd703_3495 Dickeya dadantii Ech703 chorismate mutase YP_002989076.1 4067261 D 579405 CDS YP_002989077.1 242240896 8089451 4067929..4068429 1 NC_012880.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: psp:PSPPH_1762 AsnC family transcriptional regulator; AsnC family transcriptional regulator 4068429 8089451 Dd703_3496 Dickeya dadantii Ech703 AsnC family transcriptional regulator YP_002989077.1 4067929 D 579405 CDS YP_002989078.1 242240897 8089452 4068527..4068832 1 NC_012880.1 hypothetical protein 4068832 8089452 Dd703_3497 Dickeya dadantii Ech703 hypothetical protein YP_002989078.1 4068527 D 579405 CDS YP_002989079.1 242240898 8089453 complement(4069660..4070223) 1 NC_012880.1 KEGG: plu:plu3301 hypothetical protein; hypothetical protein 4070223 8089453 Dd703_3498 Dickeya dadantii Ech703 hypothetical protein YP_002989079.1 4069660 R 579405 CDS YP_002989080.1 242240899 8089454 complement(4070220..4071311) 1 NC_012880.1 PFAM: SMC domain protein; KEGG: plu:plu3302 hypothetical protein; SMC domain-containing protein 4071311 8089454 Dd703_3499 Dickeya dadantii Ech703 SMC domain-containing protein YP_002989080.1 4070220 R 579405 CDS YP_002989081.1 242240900 8089455 complement(4071632..4072648) 1 NC_012880.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 4072648 8089455 Dd703_3500 Dickeya dadantii Ech703 1-aminocyclopropane-1-carboxylate deaminase YP_002989081.1 4071632 R 579405 CDS YP_002989082.1 242240901 8089456 complement(4072980..4073912) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2075 LysR family transcriptional regulator; LysR family transcriptional regulator 4073912 8089456 Dd703_3501 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002989082.1 4072980 R 579405 CDS YP_002989083.1 242240902 8089457 complement(4074360..4075778) 1 NC_012880.1 PFAM: peptidase M20; KEGG: bur:Bcep18194_A4728 hypothetical protein; hypothetical protein 4075778 8089457 Dd703_3502 Dickeya dadantii Ech703 hypothetical protein YP_002989083.1 4074360 R 579405 CDS YP_002989084.1 242240903 8089458 complement(4075914..4076780) 1 NC_012880.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: vei:Veis_4730 ABC transporter related; ABC transporter 4076780 8089458 Dd703_3503 Dickeya dadantii Ech703 ABC transporter YP_002989084.1 4075914 R 579405 CDS YP_002989085.1 242240904 8089459 complement(4076777..4077796) 1 NC_012880.1 KEGG: vei:Veis_4731 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 4077796 8089459 Dd703_3504 Dickeya dadantii Ech703 peptide ABC transporter ATPase YP_002989085.1 4076777 R 579405 CDS YP_002989086.1 242240905 8089460 complement(4077954..4078886) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vei:Veis_4732 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4078886 8089460 Dd703_3505 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002989086.1 4077954 R 579405 CDS YP_002989087.1 242240906 8089461 complement(4078896..4079813) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mmw:Mmwyl1_3823 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4079813 8089461 Dd703_3506 Dickeya dadantii Ech703 binding-protein-dependent transporters inner membrane component YP_002989087.1 4078896 R 579405 CDS YP_002989088.1 242240907 8089462 complement(4079872..4081404) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_4734 extracellular solute-binding protein; family 5 extracellular solute-binding protein 4081404 8089462 Dd703_3507 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002989088.1 4079872 R 579405 CDS YP_002989089.1 242240908 8089463 4082161..4082796 1 NC_012880.1 PFAM: delta-endotoxin CytB; KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); delta-endotoxin CytB 4082796 8089463 Dd703_3508 Dickeya dadantii Ech703 delta-endotoxin CytB YP_002989089.1 4082161 D 579405 CDS YP_002989090.1 242240909 8089464 4082867..4083466 1 NC_012880.1 KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); hypothetical protein 4083466 8089464 Dd703_3509 Dickeya dadantii Ech703 hypothetical protein YP_002989090.1 4082867 D 579405 CDS YP_002989091.1 242240910 8089465 4083500..4084111 1 NC_012880.1 KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); hypothetical protein 4084111 8089465 Dd703_3510 Dickeya dadantii Ech703 hypothetical protein YP_002989091.1 4083500 D 579405 CDS YP_002989092.1 242240911 8089466 4084176..4084835 1 NC_012880.1 PFAM: delta-endotoxin CytB; KEGG: asa:ASA_2128 cytolytic delta-endotoxin (insecticidal protein); delta-endotoxin CytB 4084835 8089466 Dd703_3511 Dickeya dadantii Ech703 delta-endotoxin CytB YP_002989092.1 4084176 D 579405 CDS YP_002989093.1 242240912 8089467 complement(4085138..4086499) 1 NC_012880.1 PFAM: MmgE/PrpD family protein; KEGG: pfo:Pfl01_2858 MmgE/PrpD; MmgE/PrpD family protein 4086499 8089467 Dd703_3512 Dickeya dadantii Ech703 MmgE/PrpD family protein YP_002989093.1 4085138 R 579405 CDS YP_002989094.1 242240913 8089468 complement(4086496..4087380) 1 NC_012880.1 PFAM: polysaccharide deacetylase; KEGG: pfo:Pfl01_2857 polysaccharide deacetylase; polysaccharide deacetylase 4087380 8089468 Dd703_3513 Dickeya dadantii Ech703 polysaccharide deacetylase YP_002989094.1 4086496 R 579405 CDS YP_002989095.1 242240914 8089469 complement(4087377..4088225) 1 NC_012880.1 PFAM: polysaccharide deacetylase; KEGG: pfo:Pfl01_2856 polysaccharide deacetylase; polysaccharide deacetylase 4088225 8089469 Dd703_3514 Dickeya dadantii Ech703 polysaccharide deacetylase YP_002989095.1 4087377 R 579405 CDS YP_002989096.1 242240915 8089470 complement(4088251..4089078) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pfo:Pfl01_2855 extracellular solute-binding protein; family 3 extracellular solute-binding protein 4089078 8089470 Dd703_3515 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002989096.1 4088251 R 579405 CDS YP_002989097.1 242240916 8089471 complement(4089102..4089866) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pfo:Pfl01_2854 ABC transporter-like; ABC transporter 4089866 8089471 Dd703_3516 Dickeya dadantii Ech703 ABC transporter YP_002989097.1 4089102 R 579405 CDS YP_002989098.1 242240917 8089472 complement(4089889..4090767) 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pfo:Pfl01_2853 amino acid ABC transporter permease; polar amino acid ABC transporter permease 4090767 8089472 Dd703_3517 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002989098.1 4089889 R 579405 CDS YP_002989099.1 242240918 8089473 complement(4090914..4092344) 1 NC_012880.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 4092344 8089473 Dd703_3518 Dickeya dadantii Ech703 argininosuccinate lyase YP_002989099.1 4090914 R 579405 CDS YP_002989100.1 242240919 8089474 4092512..4093459 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfo:Pfl01_2851 LysR family transcriptional regulator; LysR family transcriptional regulator 4093459 8089474 Dd703_3519 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002989100.1 4092512 D 579405 CDS YP_002989101.1 242240920 8089475 4093661..4094431 1 NC_012880.1 KEGG: eca:ECA0432 hypothetical protein; hypothetical protein 4094431 8089475 Dd703_3520 Dickeya dadantii Ech703 hypothetical protein YP_002989101.1 4093661 D 579405 CDS YP_002989102.1 242240921 8089476 complement(4094608..4095405) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpe:KPK_3986 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 4095405 8089476 Dd703_3521 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002989102.1 4094608 R 579405 CDS YP_002989103.1 242240922 8089477 complement(4095452..4096966) 1 NC_012880.1 PFAM: carbohydrate kinase FGGY; KEGG: kpe:KPK_3981 glycerol kinase; carbohydrate kinase FGGY 4096966 8089477 Dd703_3522 Dickeya dadantii Ech703 carbohydrate kinase FGGY YP_002989103.1 4095452 R 579405 CDS YP_002989104.1 242240923 8089478 complement(4096959..4098026) 1 NC_012880.1 PFAM: inner-membrane translocator; KEGG: efe:EFER_2521 transporter permease for a carbohydrate-related molecule; inner-membrane translocator 4098026 8089478 Dd703_3523 Dickeya dadantii Ech703 inner-membrane translocator YP_002989104.1 4096959 R 579405 CDS YP_002989105.1 242240924 8089479 complement(4098044..4099588) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpe:KPK_3984 sugar ABC transporter ATP-binding protein; ABC transporter 4099588 8089479 Dd703_3524 Dickeya dadantii Ech703 ABC transporter YP_002989105.1 4098044 R 579405 CDS YP_002989106.1 242240925 8089480 complement(4099588..4100211) 1 NC_012880.1 KEGG: efe:EFER_2519 lipoprotein; lipoprotein 4100211 8089480 Dd703_3525 Dickeya dadantii Ech703 lipoprotein YP_002989106.1 4099588 R 579405 CDS YP_002989107.1 242240926 8089481 complement(4100255..4101190) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: efe:EFER_2518 ABC transporter sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 4101190 8089481 Dd703_3526 Dickeya dadantii Ech703 periplasmic binding protein/LacI transcriptional regulator YP_002989107.1 4100255 R 579405 CDS YP_002989108.1 242240927 8089482 complement(4101282..4102085) 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oan:Oant_4068 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4102085 8089482 Dd703_3527 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002989108.1 4101282 R 579405 CDS YP_002989109.1 242240928 8089483 complement(4102100..4103020) 1 NC_012880.1 PFAM: transketolase; transketolase domain protein; KEGG: ypg:YpAngola_A0910 transketolase, C-terminal subunit; transketolase 4103020 8089483 Dd703_3528 Dickeya dadantii Ech703 transketolase YP_002989109.1 4102100 R 579405 CDS YP_002989110.1 242240929 8089484 complement(4103023..4103826) 1 NC_012880.1 PFAM: transketolase; KEGG: pst:PSPTO_2401 transketolase, N-terminal subunit; transketolase 4103826 8089484 Dd703_3529 Dickeya dadantii Ech703 transketolase YP_002989110.1 4103023 R 579405 CDS YP_002989111.1 242240930 8089485 4104173..4104964 1 NC_012880.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: aba:acid345_0659 DeoR family transcriptional regulator; DeoR family transcriptional regulator 4104964 8089485 Dd703_3530 Dickeya dadantii Ech703 DeoR family transcriptional regulator YP_002989111.1 4104173 D 579405 CDS YP_002989112.1 242240931 8089486 complement(4105080..4105454) 1 NC_012880.1 hypothetical protein 4105454 8089486 Dd703_3531 Dickeya dadantii Ech703 hypothetical protein YP_002989112.1 4105080 R 579405 CDS YP_002989113.1 242240932 8089487 complement(4105588..4106982) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2121 major facilitator transporter; major facilitator superfamily protein 4106982 8089487 Dd703_3532 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002989113.1 4105588 R 579405 CDS YP_002989114.1 242240933 8089489 complement(4107678..4108211) 1 NC_012880.1 KEGG: gbm:Gbem_0820 hypothetical protein; hypothetical protein 4108211 8089489 Dd703_3534 Dickeya dadantii Ech703 hypothetical protein YP_002989114.1 4107678 R 579405 CDS YP_002989115.1 242240934 8089490 complement(4108228..4108554) 1 NC_012880.1 KEGG: gme:Gmet_0233 hypothetical protein; hypothetical protein 4108554 8089490 Dd703_3535 Dickeya dadantii Ech703 hypothetical protein YP_002989115.1 4108228 R 579405 CDS YP_002989116.1 242240935 8089491 complement(4109019..4109270) 1 NC_012880.1 PFAM: protein of unknown function DUF1471; KEGG: sew:SeSA_A1290 protein YcfR; hypothetical protein 4109270 8089491 Dd703_3536 Dickeya dadantii Ech703 hypothetical protein YP_002989116.1 4109019 R 579405 CDS YP_002989117.1 242240936 8089492 4109686..4110312 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: aci:ACIAD0759 threonine efflux protein (RhtC); lysine exporter protein LysE/YggA 4110312 8089492 Dd703_3537 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002989117.1 4109686 D 579405 CDS YP_002989118.1 242240937 8089493 complement(4110789..4111637) 1 NC_012880.1 PFAM: pirin; KEGG: pzu:PHZ_c1158 pirin-related protein; pirin 4111637 8089493 Dd703_3538 Dickeya dadantii Ech703 pirin YP_002989118.1 4110789 R 579405 CDS YP_002989119.1 242240938 8089494 4111972..4112292 1 NC_012880.1 PFAM: protein of unknown function DUF891; KEGG: esa:ESA_03838 hypothetical protein; hypothetical protein 4112292 8089494 Dd703_3539 Dickeya dadantii Ech703 hypothetical protein YP_002989119.1 4111972 D 579405 CDS YP_002989120.1 242240939 8089495 4112282..4112566 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu0900 hypothetical protein; XRE family transcriptional regulator 4112566 8089495 Dd703_3540 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002989120.1 4112282 D 579405 CDS YP_002989121.1 242240940 8089496 complement(4112815..4114071) 1 NC_012880.1 PFAM: integrase family protein; KEGG: plu:plu4477 hypothetical protein; integrase family protein 4114071 8089496 Dd703_3541 Dickeya dadantii Ech703 integrase family protein YP_002989121.1 4112815 R 579405 CDS YP_002989122.1 242240941 8089497 4114594..4114866 1 NC_012880.1 PFAM: protein of unknown function DUF1778; KEGG: ecf:ECH74115_4726 hypothetical protein; hypothetical protein 4114866 8089497 Dd703_3542 Dickeya dadantii Ech703 hypothetical protein YP_002989122.1 4114594 D 579405 CDS YP_002989123.1 242240942 8089498 4114857..4115336 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ecf:ECH74115_4727 acetyltransferase, GNAT family; N-acetyltransferase GCN5 4115336 8089498 Dd703_3543 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002989123.1 4114857 D 579405 CDS YP_002989124.1 242240943 8089499 4115365..4115766 1 NC_012880.1 KEGG: kpn:KPN_02071 enzyme; hypothetical protein 4115766 8089499 Dd703_3544 Dickeya dadantii Ech703 hypothetical protein YP_002989124.1 4115365 D 579405 CDS YP_002989125.1 242240944 8089500 4115930..4116967 1 NC_012880.1 KEGG: stm:PSLT042 integrase protein; integrase protein 4116967 8089500 Dd703_3545 Dickeya dadantii Ech703 integrase protein YP_002989125.1 4115930 D 579405 CDS YP_002989126.1 242240945 8089501 4117155..4117271 1 NC_012880.1 hypothetical protein 4117271 8089501 Dd703_3546 Dickeya dadantii Ech703 hypothetical protein YP_002989126.1 4117155 D 579405 CDS YP_002989127.1 242240946 8089502 4117376..4117642 1 NC_012880.1 KEGG: plu:plu4474 hypothetical protein; transcriptional regulator Nlp 4117642 8089502 Dd703_3547 Dickeya dadantii Ech703 transcriptional regulator Nlp YP_002989127.1 4117376 D 579405 CDS YP_002989128.1 242240947 8089503 complement(4117865..4119910) 1 NC_012880.1 PFAM: P4 alpha zinc-binding domain protein; TOPRIM domain protein; SMART: P4 alpha zinc-binding domain protein; Toprim sub domain protein; KEGG: plu:plu4471 hypothetical protein; P4 alpha zinc-binding domain-containing protein 4119910 8089503 Dd703_3548 Dickeya dadantii Ech703 P4 alpha zinc-binding domain-containing protein YP_002989128.1 4117865 R 579405 CDS YP_002989129.1 242240948 8089504 complement(4119903..4120442) 1 NC_012880.1 KEGG: ypp:YPDSF_2605 prophage protein; prophage protein 4120442 8089504 Dd703_3549 Dickeya dadantii Ech703 prophage protein YP_002989129.1 4119903 R 579405 CDS YP_002989130.1 242240949 8089505 complement(4120439..4120642) 1 NC_012880.1 PFAM: prophage CP4-57 regulator; KEGG: ypg:YpAngola_A1363 AlpA family transcriptional regulator; phage transcriptional regulator AlpA 4120642 8089505 Dd703_3550 Dickeya dadantii Ech703 phage transcriptional regulator AlpA YP_002989130.1 4120439 R 579405 CDS YP_002989131.1 242240950 8089506 complement(4120642..4121523) 1 NC_012880.1 KEGG: ypg:YpAngola_A1364 DNA-binding prophage protein; DNA-binding prophage protein 4121523 8089506 Dd703_3551 Dickeya dadantii Ech703 DNA-binding prophage protein YP_002989131.1 4120642 R 579405 CDS YP_002989132.1 242240951 8089507 4122902..4124152 1 NC_012880.1 KEGG: mgm:Mmc1_0112 hypothetical protein; hypothetical protein 4124152 8089507 Dd703_3552 Dickeya dadantii Ech703 hypothetical protein YP_002989132.1 4122902 D 579405 CDS YP_002989133.1 242240952 8089508 4124155..4124784 1 NC_012880.1 KEGG: mgm:Mmc1_0113 hypothetical protein; hypothetical protein 4124784 8089508 Dd703_3553 Dickeya dadantii Ech703 hypothetical protein YP_002989133.1 4124155 D 579405 CDS YP_002989134.1 242240953 8089509 complement(4124824..4126083) 1 NC_012880.1 PFAM: integrase family protein; KEGG: stt:t4518 integrase; integrase family protein 4126083 8089509 Dd703_3554 Dickeya dadantii Ech703 integrase family protein YP_002989134.1 4124824 R 579405 CDS YP_002989135.1 242240954 8089511 complement(4126575..4127645) 1 NC_012880.1 PFAM: permease YjgP/YjgQ family protein; KEGG: spe:Spro_0564 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 4127645 8089511 Dd703_3555 Dickeya dadantii Ech703 YjgP/YjgQ family permease YP_002989135.1 4126575 R 579405 CDS YP_002989136.1 242240955 8089512 complement(4127645..4128745) 1 NC_012880.1 PFAM: permease YjgP/YjgQ family protein; KEGG: eca:ECA0405 permease; YjgP/YjgQ family permease 4128745 8089512 Dd703_3556 Dickeya dadantii Ech703 YjgP/YjgQ family permease YP_002989136.1 4127645 R 579405 CDS YP_002989137.1 242240956 8089513 4129029..4130537 1 NC_012880.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 4130537 8089513 Dd703_3557 Dickeya dadantii Ech703 leucyl aminopeptidase YP_002989137.1 4129029 D 579405 CDS YP_002989138.1 242240957 8089514 4130623..4131093 1 NC_012880.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 4131093 8089514 Dd703_3558 Dickeya dadantii Ech703 DNA polymerase III subunit chi YP_002989138.1 4130623 D 579405 CDS YP_002989139.1 242240958 8089515 4131106..4133961 1 NC_012880.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 4133961 valS 8089515 valS Dickeya dadantii Ech703 valyl-tRNA synthetase YP_002989139.1 4131106 D 579405 CDS YP_002989140.1 242240959 8089516 complement(4134076..4135692) 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0390 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4135692 8089516 Dd703_3560 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989140.1 4134076 R 579405 CDS YP_002989141.1 242240960 8089517 complement(4136018..4137184) 1 NC_012880.1 PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA0389 hypothetical protein; hypothetical protein 4137184 8089517 Dd703_3561 Dickeya dadantii Ech703 hypothetical protein YP_002989141.1 4136018 R 579405 CDS YP_002989142.1 242240961 8089518 complement(4137346..4137834) 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pzu:PHZ_c0633 acetyltransferase, GNAT family; N-acetyltransferase GCN5 4137834 8089518 Dd703_3562 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002989142.1 4137346 R 579405 CDS YP_002989143.1 242240962 8089519 complement(4137857..4138426) 1 NC_012880.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: spe:Spro_1454 XRE family transcriptional regulator; XRE family transcriptional regulator 4138426 8089519 Dd703_3563 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002989143.1 4137857 R 579405 CDS YP_002989144.1 242240963 8089520 4138670..4139173 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0386 acetyltransferase; N-acetyltransferase GCN5 4139173 8089520 Dd703_3564 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002989144.1 4138670 D 579405 CDS YP_002989145.1 242240964 8089521 complement(4139225..4139653) 1 NC_012880.1 PFAM: protein of unknown function DUF1260; KEGG: eca:ECA0385 hypothetical protein; hypothetical protein 4139653 8089521 Dd703_3565 Dickeya dadantii Ech703 hypothetical protein YP_002989145.1 4139225 R 579405 CDS YP_002989146.1 242240965 8089522 4139815..4140834 1 NC_012880.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I 4140834 8089522 Dd703_3566 Dickeya dadantii Ech703 ornithine carbamoyltransferase subunit I YP_002989146.1 4139815 D 579405 CDS YP_002989147.1 242240966 8089523 complement(4140952..4142388) 1 NC_012880.1 PFAM: glycoside hydrolase family 1; KEGG: vsp:VS_II0097 6-phospho-beta-glucosidase; glycoside hydrolase family 1 4142388 8089523 Dd703_3567 Dickeya dadantii Ech703 glycoside hydrolase family 1 YP_002989147.1 4140952 R 579405 CDS YP_002989148.1 242240967 8089524 complement(4142463..4143887) 1 NC_012880.1 PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: yen:YE1416 PTS-system permease; PTS system transporter subunit IIC 4143887 8089524 Dd703_3568 Dickeya dadantii Ech703 PTS system transporter subunit IIC YP_002989148.1 4142463 R 579405 CDS YP_002989149.1 242240968 8089525 complement(4144349..4144816) 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA0383 hypothetical protein; hypothetical protein 4144816 8089525 Dd703_3569 Dickeya dadantii Ech703 hypothetical protein YP_002989149.1 4144349 R 579405 CDS YP_002989150.1 242240969 8089526 4145368..4146303 1 NC_012880.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4146303 pyrB 8089526 pyrB Dickeya dadantii Ech703 aspartate carbamoyltransferase catalytic subunit YP_002989150.1 4145368 D 579405 CDS YP_002989151.1 242240970 8089527 4146321..4146785 1 NC_012880.1 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 4146785 8089527 Dd703_3571 Dickeya dadantii Ech703 aspartate carbamoyltransferase regulatory subunit YP_002989151.1 4146321 D 579405 CDS YP_002989152.1 242240971 8089528 4146879..4147265 1 NC_012880.1 TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: sty:STY4798 hypothetical protein; endoribonuclease L-PSP 4147265 8089528 Dd703_3572 Dickeya dadantii Ech703 endoribonuclease L-PSP YP_002989152.1 4146879 D 579405 CDS YP_002989153.1 242240972 8088881 complement(4147433..4147669) 1 NC_012880.1 KEGG: plu:plu1973 hypothetical protein; hypothetical protein 4147669 8088881 Dd703_3573 Dickeya dadantii Ech703 hypothetical protein YP_002989153.1 4147433 R 579405 CDS YP_002989154.1 242240973 8088882 4148029..4149468 1 NC_012880.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: eca:ECA0379 hypothetical protein; hypothetical protein 4149468 8088882 Dd703_3574 Dickeya dadantii Ech703 hypothetical protein YP_002989154.1 4148029 D 579405 CDS YP_002989155.1 242240974 8088883 4149462..4150391 1 NC_012880.1 PFAM: protein of unknown function DUF403; KEGG: eca:ECA0378 hypothetical protein; hypothetical protein 4150391 8088883 Dd703_3575 Dickeya dadantii Ech703 hypothetical protein YP_002989155.1 4149462 D 579405 CDS YP_002989156.1 242240975 8088884 4150388..4151209 1 NC_012880.1 PFAM: transglutaminase; transglutaminase domain protein; SMART: transglutaminase; KEGG: eca:ECA0377 hypothetical protein; transglutaminase 4151209 8088884 Dd703_3576 Dickeya dadantii Ech703 transglutaminase YP_002989156.1 4150388 D 579405 CDS YP_002989157.1 242240976 8088885 4151237..4151977 1 NC_012880.1 PFAM: 20S proteasome A and subunit betas; KEGG: eca:ECA0376 hypothetical protein; 20S proteasome subunits A and B 4151977 8088885 Dd703_3577 Dickeya dadantii Ech703 20S proteasome subunits A and B YP_002989157.1 4151237 D 579405 CDS YP_002989158.1 242240977 8088886 4152132..4152845 1 NC_012880.1 hypothetical protein 4152845 8088886 Dd703_3578 Dickeya dadantii Ech703 hypothetical protein YP_002989158.1 4152132 D 579405 CDS YP_002989159.1 242240978 8088887 4153402..4154697 1 NC_012880.1 PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: sgl:SG1135 transporter; xanthine/uracil/vitamin C permease 4154697 8088887 Dd703_3579 Dickeya dadantii Ech703 xanthine/uracil/vitamin C permease YP_002989159.1 4153402 D 579405 CDS YP_002989160.1 242240979 8088888 4155148..4157286 1 NC_012880.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 4157286 8088888 Dd703_3580 Dickeya dadantii Ech703 anaerobic ribonucleoside triphosphate reductase YP_002989160.1 4155148 D 579405 CDS YP_002989161.1 242240980 8088889 4157445..4157909 1 NC_012880.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: sea:SeAg_B4733 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 4157909 8088889 Dd703_3581 Dickeya dadantii Ech703 anaerobic ribonucleoside-triphosphate reductase activating protein YP_002989161.1 4157445 D 579405 CDS YP_002989162.1 242240981 8088890 complement(4157976..4158431) 1 NC_012880.1 KEGG: eca:ECA0372 hypothetical protein; hypothetical protein 4158431 8088890 Dd703_3582 Dickeya dadantii Ech703 hypothetical protein YP_002989162.1 4157976 R 579405 CDS YP_002989163.1 242240982 8088891 4158951..4159820 1 NC_012880.1 KEGG: glo:Glov_1957 methyltransferase type 11; hypothetical protein 4159820 8088891 Dd703_3583 Dickeya dadantii Ech703 hypothetical protein YP_002989163.1 4158951 D 579405 CDS YP_002989164.1 242240983 8088892 complement(4160832..4161125) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: sew:SeSA_A3091 crispr-associated protein Cas2; CRISPR-associated protein Cas2 4161125 8088892 Dd703_3584 Dickeya dadantii Ech703 CRISPR-associated protein Cas2 YP_002989164.1 4160832 R 579405 CDS YP_002989165.1 242240984 8088893 complement(4161122..4162045) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: ecl:EcolC_0957 CRISPR-associated Cas1 family protein; CRISPR-associated protein Cas1 4162045 8088893 Dd703_3585 Dickeya dadantii Ech703 CRISPR-associated protein Cas1 YP_002989165.1 4161122 R 579405 CDS YP_002989166.1 242240985 8088894 complement(4162059..4162706) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: sek:SSPA2606 hypothetical protein; CRISPR-associated protein, Cse3 family 4162706 8088894 Dd703_3586 Dickeya dadantii Ech703 CRISPR-associated protein, Cse3 family YP_002989166.1 4162059 R 579405 CDS YP_002989167.1 242240986 8088895 complement(4162706..4163443) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: sew:SeSA_A3094 CRISPR-associated protein Cas5; CRISPR-associated protein Cas5 family 4163443 8088895 Dd703_3587 Dickeya dadantii Ech703 CRISPR-associated protein Cas5 family YP_002989167.1 4162706 R 579405 CDS YP_002989168.1 242240987 8088896 complement(4163451..4164488) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Cse4 family; KEGG: sew:SeSA_A3095 crispr-associated protein, CSE4 family; CRISPR-associated protein, Cse4 family 4164488 8088896 Dd703_3588 Dickeya dadantii Ech703 CRISPR-associated protein, Cse4 family YP_002989168.1 4163451 R 579405 CDS YP_002989169.1 242240988 8088897 complement(4164485..4165144) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Cse2 family; KEGG: sew:SeSA_A3096 crispr-associated protein, CSE2 family; CRISPR-associated protein, Cse2 family 4165144 8088897 Dd703_3589 Dickeya dadantii Ech703 CRISPR-associated protein, Cse2 family YP_002989169.1 4164485 R 579405 CDS YP_002989170.1 242240989 8088898 complement(4165137..4166672) 1 NC_012880.1 TIGRFAM: CRISPR-associated protein, Cse1 family; KEGG: sew:SeSA_A3097 crispr-associated protein, CSE1 family; CRISPR-associated protein, Cse1 family 4166672 8088898 Dd703_3590 Dickeya dadantii Ech703 CRISPR-associated protein, Cse1 family YP_002989170.1 4165137 R 579405 CDS YP_002989171.1 242240990 8088899 complement(4167294..4170032) 1 NC_012880.1 TIGRFAM: CRISPR-associated helicase Cas3; KEGG: ecf:ECH74115_4014 CRISPR-associated helicase Cas3; CRISPR-associated helicase Cas3 4170032 8088899 Dd703_3591 Dickeya dadantii Ech703 CRISPR-associated helicase Cas3 YP_002989171.1 4167294 R 579405 CDS YP_002989172.1 242240991 8088900 4170650..4171585 1 NC_012880.1 PFAM: PfkB domain protein; KEGG: eca:ECA0364 aminoimidazole riboside kinase; PfkB domain-containing protein 4171585 8088900 Dd703_3592 Dickeya dadantii Ech703 PfkB domain-containing protein YP_002989172.1 4170650 D 579405 CDS YP_002989173.1 242240992 8088901 4171866..4173485 1 NC_012880.1 PFAM: porin LamB type; KEGG: eca:ECA0363 sucrose porin; LamB type porin 4173485 8088901 Dd703_3593 Dickeya dadantii Ech703 LamB type porin YP_002989173.1 4171866 D 579405 CDS YP_002989174.1 242240993 8088902 4173558..4174928 1 NC_012880.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA0362 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC 4174928 8088902 Dd703_3594 Dickeya dadantii Ech703 PTS system sucrose-specific transporter subunit IIBC YP_002989174.1 4173558 D 579405 CDS YP_002989175.1 242240994 8088903 4174928..4176340 1 NC_012880.1 KEGG: eca:ECA0361 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 4176340 8088903 Dd703_3595 Dickeya dadantii Ech703 sucrose-6-phosphate hydrolase YP_002989175.1 4174928 D 579405 CDS YP_002989176.1 242240995 8088904 4176372..4177391 1 NC_012880.1 KEGG: eca:ECA0360 sucrose operon repressor; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 4177391 8088904 Dd703_3596 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002989176.1 4176372 D 579405 CDS YP_002989177.1 242240996 8088905 complement(4177415..4177834) 1 NC_012880.1 TIGRFAM: TonB system transporter ExbD; PFAM: biopolymertransporter ExbD/TolR; KEGG: eca:ECA0359 biopolymer transport protein ExbD; TonB system transporter ExbD 4177834 8088905 Dd703_3597 Dickeya dadantii Ech703 TonB system transporter ExbD YP_002989177.1 4177415 R 579405 CDS YP_002989178.1 242240997 8088906 complement(4177838..4178752) 1 NC_012880.1 TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: eca:ECA0358 biopolymer transporter; tonB-system energizer ExbB 4178752 8088906 Dd703_3598 Dickeya dadantii Ech703 tonB-system energizer ExbB YP_002989178.1 4177838 R 579405 CDS YP_002989179.1 242240998 8088907 4179020..4180213 1 NC_012880.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 4180213 8088907 Dd703_3599 Dickeya dadantii Ech703 cystathionine beta-lyase YP_002989179.1 4179020 D 579405 CDS YP_002989180.1 242240999 8088908 4180402..4181064 1 NC_012880.1 PFAM: SNARE associated Golgi protein; KEGG: eca:ECA0353 DedA family membrane protein; hypothetical protein 4181064 8088908 Dd703_3600 Dickeya dadantii Ech703 hypothetical protein YP_002989180.1 4180402 D 579405 CDS YP_002989181.1 242241000 8088909 complement(4181147..4182061) 1 NC_012880.1 PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA0352 AraC family transcription regulator; AraC family transcriptional regulator 4182061 8088909 Dd703_3601 Dickeya dadantii Ech703 AraC family transcriptional regulator YP_002989181.1 4181147 R 579405 CDS YP_002989182.1 242241001 8088910 4182262..4183002 1 NC_012880.1 PFAM: nitroreductase; KEGG: eca:ECA0351 nitroreductase; nitroreductase 4183002 8088910 Dd703_3602 Dickeya dadantii Ech703 nitroreductase YP_002989182.1 4182262 D 579405 CDS YP_002989183.1 242241002 8088911 4183005..4184168 1 NC_012880.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: spe:Spro_4215 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4184168 8088911 Dd703_3603 Dickeya dadantii Ech703 iron-containing alcohol dehydrogenase YP_002989183.1 4183005 D 579405 CDS YP_002989184.1 242241003 8088912 4184397..4185242 1 NC_012880.1 methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A 4185242 dkgA 8088912 dkgA Dickeya dadantii Ech703 2,5-diketo-D-gluconate reductase A YP_002989184.1 4184397 D 579405 CDS YP_002989185.1 242241004 8088913 complement(4185283..4186119) 1 NC_012880.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein Crp; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0348 GntR family transcriptional regulator; GntR family transcriptional regulator 4186119 8088913 Dd703_3605 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002989185.1 4185283 R 579405 CDS YP_002989186.1 242241005 8088914 4186205..4187281 1 NC_012880.1 PFAM: ADP-ribosylation/crystallin J1; KEGG: ecz:ECS88_2241 (phospho)hydrolase; ADP-ribosylation/crystallin J1 4187281 8088914 Dd703_3606 Dickeya dadantii Ech703 ADP-ribosylation/crystallin J1 YP_002989186.1 4186205 D 579405 CDS YP_002989187.1 242241006 8088915 4187230..4188654 1 NC_012880.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: psb:Psyr_2922 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 4188654 8088915 Dd703_3607 Dickeya dadantii Ech703 cytosine/purines uracil thiamine allantoin permease YP_002989187.1 4187230 D 579405 CDS YP_002989188.1 242241007 8088916 4188651..4189589 1 NC_012880.1 PFAM: PfkB domain protein; KEGG: plu:plu4883 hypothetical protein; PfkB domain-containing protein 4189589 8088916 Dd703_3608 Dickeya dadantii Ech703 PfkB domain-containing protein YP_002989188.1 4188651 D 579405 CDS YP_002989189.1 242241008 8088917 complement(4189723..4191135) 1 NC_012880.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: eca:ECA0347 repressor protein for FtsI; repressor protein for FtsI 4191135 8088917 Dd703_3609 Dickeya dadantii Ech703 repressor protein for FtsI YP_002989189.1 4189723 R 579405 CDS YP_002989190.1 242241009 8088918 complement(4191178..4191915) 1 NC_012880.1 KEGG: eca:ECA0346 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 4191915 8088918 Dd703_3610 Dickeya dadantii Ech703 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002989190.1 4191178 R 579405 CDS YP_002989191.1 242241010 8088919 complement(4192260..4194533) 1 NC_012880.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 4194533 8088919 Dd703_3611 Dickeya dadantii Ech703 DNA topoisomerase IV subunit A YP_002989191.1 4192260 R 579405 CDS YP_002989192.1 242241011 8088920 4194783..4195364 1 NC_012880.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eca:ECA0337 modulator of drug activity B; NAD(P)H dehydrogenase (quinone) 4195364 8088920 Dd703_3612 Dickeya dadantii Ech703 NAD(P)H dehydrogenase (quinone) YP_002989192.1 4194783 D 579405 CDS YP_002989193.1 242241012 8088921 complement(4195381..4196277) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0336 LysR family transcriptional regulator; LysR family transcriptional regulator 4196277 8088921 Dd703_3613 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002989193.1 4195381 R 579405 CDS YP_002989194.1 242241013 8088922 complement(4196290..4198185) 1 NC_012880.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 4198185 8088922 Dd703_3614 Dickeya dadantii Ech703 DNA topoisomerase IV subunit B YP_002989194.1 4196290 R 579405 CDS YP_002989195.1 242241014 8088923 complement(4198298..4198879) 1 NC_012880.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA 4198879 8088923 Dd703_3615 Dickeya dadantii Ech703 esterase YqiA YP_002989195.1 4198298 R 579405 CDS YP_002989196.1 242241015 8088924 complement(4198879..4199706) 1 NC_012880.1 PFAM: calcineurin phosphoesterase; metallophosphoesterase; KEGG: eca:ECA0333 cyclic 3',5'-adenosine monophosphate phosphodiesterase; calcineurin phosphoesterase 4199706 8088924 Dd703_3616 Dickeya dadantii Ech703 calcineurin phosphoesterase YP_002989196.1 4198879 R 579405 CDS YP_002989197.1 242241016 8088925 complement(4199734..4200156) 1 NC_012880.1 PFAM: protein of unknown function DUF1249; KEGG: spe:Spro_4266 hypothetical protein; hypothetical protein 4200156 8088925 Dd703_3617 Dickeya dadantii Ech703 hypothetical protein YP_002989197.1 4199734 R 579405 CDS YP_002989198.1 242241017 8088926 complement(4200156..4200791) 1 NC_012880.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF 4200791 nudF 8088926 nudF Dickeya dadantii Ech703 ADP-ribose pyrophosphatase NudF YP_002989198.1 4200156 R 579405 CDS YP_002989199.1 242241018 8088927 4201279..4202688 1 NC_012880.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 4202688 tolC 8088927 tolC Dickeya dadantii Ech703 outer membrane channel protein YP_002989199.1 4201279 D 579405 CDS YP_002989200.1 242241019 8088928 4202840..4203565 1 NC_012880.1 PFAM: protein of unknown function DUF1190; KEGG: eca:ECA0329 hypothetical protein; hypothetical protein 4203565 8088928 Dd703_3620 Dickeya dadantii Ech703 hypothetical protein YP_002989200.1 4202840 D 579405 CDS YP_002989201.1 242241020 8088929 4203578..4204738 1 NC_012880.1 PFAM: glutathionylspermidine synthase; KEGG: plu:plu3957 hypothetical protein; glutathionylspermidine synthase 4204738 8088929 Dd703_3621 Dickeya dadantii Ech703 glutathionylspermidine synthase YP_002989201.1 4203578 D 579405 CDS YP_002989202.1 242241021 8088930 complement(4204820..4205608) 1 NC_012880.1 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein 4205608 8088930 Dd703_3622 Dickeya dadantii Ech703 hypothetical protein YP_002989202.1 4204820 R 579405 CDS YP_002989203.1 242241022 8088932 complement(4206331..4207209) 1 NC_012880.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA0323 tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole methyltransferase 4207209 8088932 Dd703_3623 Dickeya dadantii Ech703 uroporphyrin-III C/tetrapyrrole methyltransferase YP_002989203.1 4206331 R 579405 CDS YP_002989204.1 242241023 8088933 4207269..4209311 1 NC_012880.1 PFAM: LppC family lipoprotein; KEGG: eca:ECA0322 hypothetical protein; LppC family lipoprotein 4209311 8088933 Dd703_3624 Dickeya dadantii Ech703 LppC family lipoprotein YP_002989204.1 4207269 D 579405 CDS YP_002989205.1 242241024 8088934 4209323..4209664 1 NC_012880.1 PFAM: protein of unknown function UPF0102; KEGG: spe:Spro_4337 hypothetical protein; hypothetical protein 4209664 8088934 Dd703_3625 Dickeya dadantii Ech703 hypothetical protein YP_002989205.1 4209323 D 579405 CDS YP_002989206.1 242241025 8088935 4209702..4210292 1 NC_012880.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA 4210292 8088935 Dd703_3626 Dickeya dadantii Ech703 DnaA initiator-associating protein DiaA YP_002989206.1 4209702 D 579405 CDS YP_002989207.1 242241026 8088936 4210303..4210875 1 NC_012880.1 PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: eca:ECA0319 hypothetical protein; hypothetical protein 4210875 8088936 Dd703_3627 Dickeya dadantii Ech703 hypothetical protein YP_002989207.1 4210303 D 579405 CDS YP_002989208.1 242241027 8088937 complement(4210987..4212288) 1 NC_012880.1 KEGG: eca:ECA0318 hypothetical protein; hypothetical protein 4212288 8088937 Dd703_3628 Dickeya dadantii Ech703 hypothetical protein YP_002989208.1 4210987 R 579405 CDS YP_002989209.1 242241028 8088938 complement(4212383..4213117) 1 NC_012880.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 4213117 mtgA 8088938 mtgA Dickeya dadantii Ech703 monofunctional biosynthetic peptidoglycan transglycosylase YP_002989209.1 4212383 R 579405 CDS YP_002989210.1 242241029 8088939 complement(4213114..4213767) 1 NC_012880.1 PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA0316 isoprenoid biosynthesis protein; isoprenoid biosynthesis protein 4213767 8088939 Dd703_3630 Dickeya dadantii Ech703 isoprenoid biosynthesis protein YP_002989210.1 4213114 R 579405 CDS YP_002989211.1 242241030 8088940 complement(4214005..4216344) 1 NC_012880.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 4216344 8088940 Dd703_3631 Dickeya dadantii Ech703 aerobic respiration control sensor protein ArcB YP_002989211.1 4214005 R 579405 CDS YP_002989212.1 242241031 8088941 complement(4216430..4217383) 1 NC_012880.1 KEGG: eca:ECA0313 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 4217383 8088941 Dd703_3632 Dickeya dadantii Ech703 hypothetical protein YP_002989212.1 4216430 R 579405 CDS YP_002989213.1 242241032 8088942 4218053..4222513 1 NC_012880.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 4222513 gltB 8088942 gltB Dickeya dadantii Ech703 glutamate synthase subunit alpha YP_002989213.1 4218053 D 579405 CDS YP_002989214.1 242241033 8088943 4222523..4223941 1 NC_012880.1 glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 4223941 gltD 8088943 gltD Dickeya dadantii Ech703 glutamate synthase subunit beta YP_002989214.1 4222523 D 579405 CDS YP_002989215.1 242241034 8088945 complement(4224609..4225106) 1 NC_012880.1 PFAM: stringent starvation protein B; KEGG: efe:EFER_3198 ClpXP protease specificity-enhancing factor; stringent starvation protein B 4225106 8088945 Dd703_3636 Dickeya dadantii Ech703 stringent starvation protein B YP_002989215.1 4224609 R 579405 CDS YP_002989216.1 242241035 8088946 complement(4225112..4225753) 1 NC_012880.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 4225753 sspA 8088946 sspA Dickeya dadantii Ech703 stringent starvation protein A YP_002989216.1 4225112 R 579405 CDS YP_002989217.1 242241036 8088947 complement(4226078..4226470) 1 NC_012880.1 PFAM: ribosomal protein S9; KEGG: eca:ECA0307 30S ribosomal protein S9; 30S ribosomal protein S9 4226470 8088947 Dd703_3638 Dickeya dadantii Ech703 30S ribosomal protein S9 YP_002989217.1 4226078 R 579405 CDS YP_002989218.1 242241037 8088948 complement(4226486..4226914) 1 NC_012880.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 4226914 rplM 8088948 rplM Dickeya dadantii Ech703 50S ribosomal protein L13 YP_002989218.1 4226486 R 579405 CDS YP_002989219.1 242241038 8088949 complement(4227183..4228313) 1 NC_012880.1 PFAM: AFG1-family ATPase; KEGG: eca:ECA0305 ATP/GTP-binding protein; AFG1 family ATPase 4228313 8088949 Dd703_3640 Dickeya dadantii Ech703 AFG1 family ATPase YP_002989219.1 4227183 R 579405 CDS YP_002989220.1 242241039 8088950 4228533..4228937 1 NC_012880.1 PFAM: protein of unknown function DUF1043; KEGG: eca:ECA0304 cytochrome d ubiquinol oxidase subunit III; cytochrome d ubiquinol oxidase subunit III 4228937 8088950 Dd703_3641 Dickeya dadantii Ech703 cytochrome d ubiquinol oxidase subunit III YP_002989220.1 4228533 D 579405 CDS YP_002989221.1 242241040 8088951 4229175..4230545 1 NC_012880.1 KEGG: eca:ECA0303 exported protease; TIGRFAM: protease Do; PFAM: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; protease Do 4230545 8088951 Dd703_3642 Dickeya dadantii Ech703 protease Do YP_002989221.1 4229175 D 579405 CDS YP_002989222.1 242241041 8088952 4230633..4231697 1 NC_012880.1 KEGG: ecq:ECED1_3885 serine endoprotease periplasmic; TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; serine endoprotease 4231697 8088952 Dd703_3643 Dickeya dadantii Ech703 serine endoprotease YP_002989222.1 4230633 D 579405 CDS YP_002989223.1 242241042 8088953 complement(4231785..4233047) 1 NC_012880.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4233047 8088953 Dd703_3644 Dickeya dadantii Ech703 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002989223.1 4231785 R 579405 CDS YP_002989224.1 242241043 8088954 complement(4233099..4233353) 1 NC_012880.1 PFAM: BolA family protein; KEGG: spe:Spro_4355 BolA family protein; BolA family protein 4233353 8088954 Dd703_3645 Dickeya dadantii Ech703 BolA family protein YP_002989224.1 4233099 R 579405 CDS YP_002989225.1 242241044 8088955 complement(4233487..4233789) 1 NC_012880.1 KEGG: yen:YE3748 anti-sigma B factor antagonist; anti-sigma B factor antagonist 4233789 8088955 Dd703_3646 Dickeya dadantii Ech703 anti-sigma B factor antagonist YP_002989225.1 4233487 R 579405 CDS YP_002989226.1 242241045 8088956 complement(4233782..4234417) 1 NC_012880.1 PFAM: toluene tolerance family protein; KEGG: eca:ECA0298 hypothetical protein; toluene tolerance family protein 4234417 8088956 Dd703_3647 Dickeya dadantii Ech703 toluene tolerance family protein YP_002989226.1 4233782 R 579405 CDS YP_002989227.1 242241046 8088957 complement(4234429..4235001) 1 NC_012880.1 PFAM: hypothetical protein; KEGG: eca:ECA0297 hypothetical protein; hypothetical protein 4235001 8088957 Dd703_3648 Dickeya dadantii Ech703 hypothetical protein YP_002989227.1 4234429 R 579405 CDS YP_002989228.1 242241047 8088958 complement(4235006..4235788) 1 NC_012880.1 PFAM: protein of unknown function DUF140; KEGG: eca:ECA0296 hypothetical protein; hypothetical protein 4235788 8088958 Dd703_3649 Dickeya dadantii Ech703 hypothetical protein YP_002989228.1 4235006 R 579405 CDS YP_002989229.1 242241048 8088959 complement(4235795..4236601) 1 NC_012880.1 ATP-binding subunit of a ABC toluene efflux transporter; ABC transporter ATP-binding protein 4236601 8088959 Dd703_3650 Dickeya dadantii Ech703 ABC transporter ATP-binding protein YP_002989229.1 4235795 R 579405 CDS YP_002989230.1 242241049 8088960 4236883..4237845 1 NC_012880.1 YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter 4237845 8088960 Dd703_3651 Dickeya dadantii Ech703 calcium/sodium:proton antiporter YP_002989230.1 4236883 D 579405 CDS YP_002989231.1 242241050 8088961 4237876..4238862 1 NC_012880.1 KEGG: eca:ECA0293 D-arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein; D-arabinose 5-phosphate isomerase 4238862 8088961 Dd703_3652 Dickeya dadantii Ech703 D-arabinose 5-phosphate isomerase YP_002989231.1 4237876 D 579405 CDS YP_002989232.1 242241051 8087019 4238902..4239468 1 NC_012880.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4239468 8087019 Dd703_3653 Dickeya dadantii Ech703 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_002989232.1 4238902 D 579405 CDS YP_002989233.1 242241052 8087020 4239465..4240034 1 NC_012880.1 PFAM: protein of unknown function DUF1239; KEGG: spe:Spro_4364 hypothetical protein; hypothetical protein 4240034 8087020 Dd703_3654 Dickeya dadantii Ech703 hypothetical protein YP_002989233.1 4239465 D 579405 CDS YP_002989234.1 242241053 8087021 4240012..4240620 1 NC_012880.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: efe:EFER_3177 lipopolysaccharide transporter A: periplasmic-binding component of ABC superfamily; lipopolysaccharide transport periplasmic protein LptA 4240620 8087021 Dd703_3655 Dickeya dadantii Ech703 lipopolysaccharide transport periplasmic protein LptA YP_002989234.1 4240012 D 579405 CDS YP_002989235.1 242241054 8087022 4240637..4241362 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA0289 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 4241362 8087022 Dd703_3656 Dickeya dadantii Ech703 ABC transporter ATP-binding protein YP_002989235.1 4240637 D 579405 CDS YP_002989236.1 242241055 8087023 4241411..4242847 1 NC_012880.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 4242847 8087023 Dd703_3657 Dickeya dadantii Ech703 RNA polymerase factor sigma-54 YP_002989236.1 4241411 D 579405 CDS YP_002989237.1 242241056 8087024 4242871..4243158 1 NC_012880.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: yen:YE3760 sigma(54) modulation protein; sigma 54 modulation protein/ribosomal protein S30EA 4243158 8087024 Dd703_3658 Dickeya dadantii Ech703 sigma 54 modulation protein/ribosomal protein S30EA YP_002989237.1 4242871 D 579405 CDS YP_002989238.1 242241057 8087025 4243226..4243735 1 NC_012880.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: eca:ECA0286 sugar-specific enzyme IIA component of PTS; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 4243735 8087025 Dd703_3659 Dickeya dadantii Ech703 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_002989238.1 4243226 D 579405 CDS YP_002989239.1 242241058 8087026 4243880..4244734 1 NC_012880.1 PFAM: conserved hypothetical protein; KEGG: esa:ESA_03598 hypothetical protein; hypothetical protein 4244734 8087026 Dd703_3660 Dickeya dadantii Ech703 hypothetical protein YP_002989239.1 4243880 D 579405 CDS YP_002989240.1 242241059 8087027 4244731..4245003 1 NC_012880.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: eca:ECA0284 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 4245003 8087027 Dd703_3661 Dickeya dadantii Ech703 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) YP_002989240.1 4244731 D 579405 CDS YP_002989241.1 242241060 8087028 4245166..4245576 1 NC_012880.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 4245576 8087028 Dd703_3662 Dickeya dadantii Ech703 nucleoside diphosphate kinase regulator YP_002989241.1 4245166 D 579405 CDS YP_002989242.1 242241061 8087029 complement(4245642..4246982) 1 NC_012880.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA 4246982 8087029 Dd703_3663 Dickeya dadantii Ech703 peptidase PmbA YP_002989242.1 4245642 R 579405 CDS YP_002989243.1 242241062 8087030 4247246..4247797 1 NC_012880.1 PFAM: protein of unknown function DUF615; KEGG: spe:Spro_4387 hypothetical protein; hypothetical protein 4247797 8087030 Dd703_3664 Dickeya dadantii Ech703 hypothetical protein YP_002989243.1 4247246 D 579405 CDS YP_002989244.1 242241063 8087031 complement(4247884..4248510) 1 NC_012880.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: eta:ETA_30500 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 4248510 8087031 Dd703_3665 Dickeya dadantii Ech703 lysine exporter protein LysE/YggA YP_002989244.1 4247884 R 579405 CDS YP_002989245.1 242241064 8087032 4248616..4249116 1 NC_012880.1 PFAM: protein of unknown function DUF1543; KEGG: sgl:SG0708 hypothetical protein; hypothetical protein 4249116 8087032 Dd703_3666 Dickeya dadantii Ech703 hypothetical protein YP_002989245.1 4248616 D 579405 CDS YP_002989246.1 242241065 8087033 complement(4249123..4251078) 1 NC_012880.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB 4251078 8087033 Dd703_3667 Dickeya dadantii Ech703 p-hydroxybenzoic acid efflux subunit AaeB YP_002989246.1 4249123 R 579405 CDS YP_002989247.1 242241066 8087034 complement(4251092..4252039) 1 NC_012880.1 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA 4252039 8087034 Dd703_3668 Dickeya dadantii Ech703 p-hydroxybenzoic acid efflux subunit AaeA YP_002989247.1 4251092 R 579405 CDS YP_002989248.1 242241067 8087035 complement(4252045..4252248) 1 NC_012880.1 membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein 4252248 8087035 Dd703_3669 Dickeya dadantii Ech703 hypothetical protein YP_002989248.1 4252045 R 579405 CDS YP_002989249.1 242241068 8087036 4252671..4253615 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0276 DNA-binding transcriptional regulator; DNA-binding transcriptional regulator 4253615 8087036 Dd703_3670 Dickeya dadantii Ech703 DNA-binding transcriptional regulator YP_002989249.1 4252671 D 579405 CDS YP_002989250.1 242241069 8087037 complement(4253663..4255108) 1 NC_012880.1 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD 4255108 tldD 8087037 tldD Dickeya dadantii Ech703 protease TldD YP_002989250.1 4253663 R 579405 CDS YP_002989251.1 242241070 8087038 complement(4255156..4258989) 1 NC_012880.1 KEGG: eca:ECA0272 hypothetical protein; hypothetical protein 4258989 8087038 Dd703_3672 Dickeya dadantii Ech703 hypothetical protein YP_002989251.1 4255156 R 579405 CDS YP_002989252.1 242241071 8087039 complement(4259084..4260553) 1 NC_012880.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 4260553 8087039 Dd703_3673 Dickeya dadantii Ech703 ribonuclease G YP_002989252.1 4259084 R 579405 CDS YP_002989253.1 242241072 8087040 complement(4260543..4261136) 1 NC_012880.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ypi:YpsIP31758_0401 Maf-like protein; maf protein 4261136 8087040 Dd703_3674 Dickeya dadantii Ech703 maf protein YP_002989253.1 4260543 R 579405 CDS YP_002989254.1 242241073 8087041 complement(4261146..4261634) 1 NC_012880.1 part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD 4261634 8087041 Dd703_3675 Dickeya dadantii Ech703 rod shape-determining protein MreD YP_002989254.1 4261146 R 579405 CDS YP_002989255.1 242241074 8087042 complement(4261631..4262875) 1 NC_012880.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 4262875 8087042 Dd703_3676 Dickeya dadantii Ech703 rod shape-determining protein MreC YP_002989255.1 4261631 R 579405 CDS YP_002989256.1 242241075 8087043 complement(4262977..4264020) 1 NC_012880.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 4264020 8087043 Dd703_3677 Dickeya dadantii Ech703 rod shape-determining protein MreB YP_002989256.1 4262977 R 579405 CDS YP_002989257.1 242241076 8087044 complement(4264337..4266259) 1 NC_012880.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 4266259 8087044 Dd703_3678 Dickeya dadantii Ech703 regulatory protein CsrD YP_002989257.1 4264337 R 579405 CDS YP_002989258.1 242241077 8087045 4266438..4267418 1 NC_012880.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA0265 zinc-binding oxidoreductase; YhdH/YhfP family quinone oxidoreductase 4267418 8087045 Dd703_3679 Dickeya dadantii Ech703 YhdH/YhfP family quinone oxidoreductase YP_002989258.1 4266438 D 579405 CDS YP_002989259.1 242241078 8087046 4267629..4268624 1 NC_012880.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 4268624 8087046 Dd703_3680 Dickeya dadantii Ech703 sulfite oxidase subunit YedY YP_002989259.1 4267629 D 579405 CDS YP_002989260.1 242241079 8087047 4268625..4269224 1 NC_012880.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 4269224 8087047 Dd703_3681 Dickeya dadantii Ech703 sulfite oxidase subunit YedZ YP_002989260.1 4268625 D 579405 CDS YP_002989261.1 242241080 8087048 4269462..4269914 1 NC_012880.1 KEGG: eca:ECA0262 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 4269914 8087048 Dd703_3682 Dickeya dadantii Ech703 3-dehydroquinate dehydratase YP_002989261.1 4269462 D 579405 CDS YP_002989262.1 242241081 8087049 4269936..4270388 1 NC_012880.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: eca:ECA0261 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4270388 8087049 Dd703_3683 Dickeya dadantii Ech703 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002989262.1 4269936 D 579405 CDS YP_002989263.1 242241082 8087050 4270400..4271743 1 NC_012880.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; carbamoyl-phosphate synthetase large chain domain protein; KEGG: ecr:ECIAI1_3399 acetyl-CoA carboxylase, biotin carboxylase subunit; acetyl-CoA carboxylase, biotin carboxylase 4271743 8087050 Dd703_3684 Dickeya dadantii Ech703 acetyl-CoA carboxylase, biotin carboxylase YP_002989263.1 4270400 D 579405 CDS YP_002989264.1 242241083 8087051 4271873..4272115 1 NC_012880.1 PFAM: protein of unknown function DUF997; KEGG: spe:Spro_4419 hypothetical protein; hypothetical protein 4272115 8087051 Dd703_3685 Dickeya dadantii Ech703 hypothetical protein YP_002989264.1 4271873 D 579405 CDS YP_002989265.1 242241084 8087052 4272105..4273556 1 NC_012880.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 4273556 panF 8087052 panF Dickeya dadantii Ech703 sodium/panthothenate symporter YP_002989265.1 4272105 D 579405 CDS YP_002989266.1 242241085 8087053 4273570..4274457 1 NC_012880.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4274457 prmA 8087053 prmA Dickeya dadantii Ech703 50S ribosomal protein L11 methyltransferase YP_002989266.1 4273570 D 579405 CDS YP_002989267.1 242241086 8087054 4274755..4275720 1 NC_012880.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; KEGG: eca:ECA0256 tRNA-dihydrouridine synthase B; tRNA-dihydrouridine synthase B 4275720 8087054 Dd703_3688 Dickeya dadantii Ech703 tRNA-dihydrouridine synthase B YP_002989267.1 4274755 D 579405 CDS YP_002989268.1 242241087 8087055 4275744..4276040 1 NC_012880.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 4276040 fis 8087055 fis Dickeya dadantii Ech703 DNA-binding protein Fis YP_002989268.1 4275744 D 579405 CDS YP_002989269.1 242241088 8087056 complement(4276204..4276902) 1 NC_012880.1 KEGG: ajs:Ajs_0826 DNA ligase III-like protein; DNA ligase III-like protein 4276902 8087056 Dd703_3690 Dickeya dadantii Ech703 DNA ligase III-like protein YP_002989269.1 4276204 R 579405 CDS YP_002989270.1 242241089 8087057 complement(4276899..4277441) 1 NC_012880.1 KEGG: ajs:Ajs_0827 hypothetical protein; hypothetical protein 4277441 8087057 Dd703_3691 Dickeya dadantii Ech703 hypothetical protein YP_002989270.1 4276899 R 579405 CDS YP_002989271.1 242241090 8087058 complement(4277438..4278838) 1 NC_012880.1 KEGG: ajs:Ajs_0828 hypothetical protein; hypothetical protein 4278838 8087058 Dd703_3692 Dickeya dadantii Ech703 hypothetical protein YP_002989271.1 4277438 R 579405 CDS YP_002989272.1 242241091 8087059 complement(4279054..4279218) 1 NC_012880.1 hypothetical protein 4279218 8087059 Dd703_3693 Dickeya dadantii Ech703 hypothetical protein YP_002989272.1 4279054 R 579405 CDS YP_002989273.1 242241092 8087060 4279605..4281641 1 NC_012880.1 KEGG: ent:Ent638_2146 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with MHYT sensor 4281641 8087060 Dd703_3694 Dickeya dadantii Ech703 diguanylate cyclase/phosphodiesterase with MHYT sensor YP_002989273.1 4279605 D 579405 CDS YP_002989274.1 242241093 8087061 4281854..4282102 1 NC_012880.1 PFAM: protein of unknown function DUF1471; KEGG: plu:plu4502 hypothetical protein; hypothetical protein 4282102 8087061 Dd703_3695 Dickeya dadantii Ech703 hypothetical protein YP_002989274.1 4281854 D 579405 CDS YP_002989275.1 242241094 8087062 complement(4282112..4283089) 1 NC_012880.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl01_2570 LysR family transcriptional regulator; LysR family transcriptional regulator 4283089 8087062 Dd703_3696 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002989275.1 4282112 R 579405 CDS YP_002989276.1 242241095 8087063 4283176..4284096 1 NC_012880.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bvi:Bcep1808_0666 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4284096 8087063 Dd703_3697 Dickeya dadantii Ech703 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002989276.1 4283176 D 579405 CDS YP_002989277.1 242241096 8087064 4284416..4285186 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0247 cystine-binding periplasmic protein; family 3 extracellular solute-binding protein 4285186 8087064 Dd703_3698 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002989277.1 4284416 D 579405 CDS YP_002989278.1 242241097 8087065 4285214..4285879 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0246 amino-acid transporter permease protein; polar amino acid ABC transporter permease 4285879 8087065 Dd703_3699 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002989278.1 4285214 D 579405 CDS YP_002989279.1 242241098 8087066 4286011..4286703 1 NC_012880.1 KEGG: cko:CKO_01814 hypothetical protein; hypothetical protein 4286703 8087066 Dd703_3700 Dickeya dadantii Ech703 hypothetical protein YP_002989279.1 4286011 D 579405 CDS YP_002989280.1 242241099 8087067 4286993..4288024 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0245 general L-amino ABC transporter binding protein; family 3 extracellular solute-binding protein 4288024 8087067 Dd703_3701 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002989280.1 4286993 D 579405 CDS YP_002989281.1 242241100 8087068 4288100..4289278 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0244 L-amino acid ABC transporter permease; polar amino acid ABC transporter permease 4289278 8087068 Dd703_3702 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002989281.1 4288100 D 579405 CDS YP_002989282.1 242241101 8087069 4289294..4290382 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0243 L-amino acid ABC transporter permease; polar amino acid ABC transporter permease 4290382 8087069 Dd703_3703 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002989282.1 4289294 D 579405 CDS YP_002989283.1 242241102 8087070 4290391..4291152 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA0242 L-amino acid ABC transporter ATP-binding protein; ABC transporter 4291152 8087070 Dd703_3704 Dickeya dadantii Ech703 ABC transporter YP_002989283.1 4290391 D 579405 CDS YP_002989284.1 242241103 8087077 4297914..4299503 1 NC_012880.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4299503 purH 8087077 purH Dickeya dadantii Ech703 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002989284.1 4297914 D 579405 CDS YP_002989285.1 242241104 8087078 4299519..4300805 1 NC_012880.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 4300805 8087078 Dd703_3708 Dickeya dadantii Ech703 phosphoribosylamine--glycine ligase YP_002989285.1 4299519 D 579405 CDS YP_002989286.1 242241105 8087079 complement(4300877..4301509) 1 NC_012880.1 PFAM: protein of unknown function DUF1481; KEGG: eca:ECA0239 lipoprotein; hypothetical protein 4301509 8087079 Dd703_3709 Dickeya dadantii Ech703 hypothetical protein YP_002989286.1 4300877 R 579405 CDS YP_002989287.1 242241106 8087080 complement(4301586..4301858) 1 NC_012880.1 histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 4301858 8087080 Dd703_3710 Dickeya dadantii Ech703 transcriptional regulator HU subunit alpha YP_002989287.1 4301586 R 579405 CDS YP_002989288.1 242241107 8087081 complement(4302108..4302698) 1 NC_012880.1 PFAM: protein of unknown function DUF416; KEGG: eca:ECA0237 lipoprotein; hypothetical protein 4302698 8087081 Dd703_3711 Dickeya dadantii Ech703 hypothetical protein YP_002989288.1 4302108 R 579405 CDS YP_002989289.1 242241108 8087082 complement(4302791..4303465) 1 NC_012880.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V 4303465 8087082 Dd703_3712 Dickeya dadantii Ech703 endonuclease V YP_002989289.1 4302791 R 579405 CDS YP_002989290.1 242241109 8087083 complement(4303455..4304537) 1 NC_012880.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 4304537 hemE 8087083 hemE Dickeya dadantii Ech703 uroporphyrinogen decarboxylase YP_002989290.1 4303455 R 579405 CDS YP_002989291.1 242241110 8087084 complement(4304597..4305370) 1 NC_012880.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 4305370 nudC 8087084 nudC Dickeya dadantii Ech703 NADH pyrophosphatase YP_002989291.1 4304597 R 579405 CDS YP_002989292.1 242241111 8087085 4305840..4307792 1 NC_012880.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4307792 8087085 Dd703_3715 Dickeya dadantii Ech703 thiamine biosynthesis protein ThiC YP_002989292.1 4305840 D 579405 CDS YP_002989293.1 242241112 8087086 4307789..4308424 1 NC_012880.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 4308424 8087086 Dd703_3716 Dickeya dadantii Ech703 thiamine-phosphate pyrophosphorylase YP_002989293.1 4307789 D 579405 CDS YP_002989294.1 242241113 8087087 4308426..4309175 1 NC_012880.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: eca:ECA0230 thiamine biosynthesis protein ThiF; UBA/THIF-type NAD/FAD binding protein 4309175 8087087 Dd703_3717 Dickeya dadantii Ech703 UBA/THIF-type NAD/FAD binding protein YP_002989294.1 4308426 D 579405 CDS YP_002989295.1 242241114 8087088 4309172..4309372 1 NC_012880.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: eca:ECA0229A sulfur carrier protein ThiS; thiamine biosynthesis protein ThiS 4309372 8087088 Dd703_3718 Dickeya dadantii Ech703 thiamine biosynthesis protein ThiS YP_002989295.1 4309172 D 579405 CDS YP_002989296.1 242241115 8087089 4309374..4310150 1 NC_012880.1 PFAM: thiazole biosynthesis protein; KEGG: eca:ECA0229 thiazole synthase; thiazole biosynthesis protein 4310150 8087089 Dd703_3719 Dickeya dadantii Ech703 thiazole biosynthesis protein YP_002989296.1 4309374 D 579405 CDS YP_002989297.1 242241116 8087090 4310150..4311283 1 NC_012880.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 4311283 thiH 8087090 thiH Dickeya dadantii Ech703 thiamine biosynthesis protein ThiH YP_002989297.1 4310150 D 579405 CDS YP_002989298.1 242241117 8087091 complement(4311299..4312744) 1 NC_012880.1 KEGG: spe:Spro_1499 heavy metal sensor signal transduction histidine kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; heavy metal sensor signal transduction histidine kinase 4312744 8087091 Dd703_3721 Dickeya dadantii Ech703 heavy metal sensor signal transduction histidine kinase YP_002989298.1 4311299 R 579405 CDS YP_002989299.1 242241118 8087092 complement(4312741..4313412) 1 NC_012880.1 KEGG: spe:Spro_1498 two component heavy metal response transcriptional regulator; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family 4313412 8087092 Dd703_3722 Dickeya dadantii Ech703 two component heavy metal response transcriptional regulator, winged helix family YP_002989299.1 4312741 R 579405 CDS YP_002989300.1 242241119 8087093 4313592..4314215 1 NC_012880.1 KEGG: spe:Spro_1497 hypothetical protein; hypothetical protein 4314215 8087093 Dd703_3723 Dickeya dadantii Ech703 hypothetical protein YP_002989300.1 4313592 D 579405 CDS YP_002989301.1 242241120 8087094 4314227..4314832 1 NC_012880.1 KEGG: spe:Spro_1496 HupC/HyaC/HydC family protein; HupC/HyaC/HydC family protein 4314832 8087094 Dd703_3724 Dickeya dadantii Ech703 HupC/HyaC/HydC family protein YP_002989301.1 4314227 D 579405 CDS YP_002989302.1 242241121 8087095 4314822..4315589 1 NC_012880.1 PFAM: oxidoreductase molybdopterin binding; KEGG: spe:Spro_1495 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding 4315589 8087095 Dd703_3725 Dickeya dadantii Ech703 oxidoreductase molybdopterin binding YP_002989302.1 4314822 D 579405 CDS YP_002989303.1 242241122 8087096 complement(4315657..4317096) 1 NC_012880.1 PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eta:ETA_01690 GntR-family transcriptional regulator; GntR family transcriptional regulator 4317096 8087096 Dd703_3726 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002989303.1 4315657 R 579405 CDS YP_002989304.1 242241123 8087097 4317272..4317487 1 NC_012880.1 PFAM: protein of unknown function DUF1127; KEGG: ecj:JW4304 conserved hypothetical protein; hypothetical protein 4317487 8087097 Dd703_3727 Dickeya dadantii Ech703 hypothetical protein YP_002989304.1 4317272 D 579405 CDS YP_002989305.1 242241124 8087098 complement(4317474..4317683) 1 NC_012880.1 KEGG: eca:ECA0227 GntR family transcriptional regulator; GntR family transcriptional regulator 4317683 8087098 Dd703_3728 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002989305.1 4317474 R 579405 CDS YP_002989306.1 242241125 8087099 complement(4318249..4319334) 1 NC_012880.1 PFAM: protein of unknown function DUF1176; KEGG: pmy:Pmen_3175 hypothetical protein; hypothetical protein 4319334 8087099 Dd703_3729 Dickeya dadantii Ech703 hypothetical protein YP_002989306.1 4318249 R 579405 CDS YP_002989307.1 242241126 8087100 complement(4319645..4323868) 1 NC_012880.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4323868 8087100 Dd703_3730 Dickeya dadantii Ech703 DNA-directed RNA polymerase subunit beta' YP_002989307.1 4319645 R 579405 CDS YP_002989308.1 242241127 8087101 complement(4323975..4328003) 1 NC_012880.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4328003 rpoB 8087101 rpoB Dickeya dadantii Ech703 DNA-directed RNA polymerase subunit beta YP_002989308.1 4323975 R 579405 CDS YP_002989309.1 242241128 8087102 complement(4328328..4328696) 1 NC_012880.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4328696 rplL 8087102 rplL Dickeya dadantii Ech703 50S ribosomal protein L7/L12 YP_002989309.1 4328328 R 579405 CDS YP_002989310.1 242241129 8087103 complement(4328763..4329260) 1 NC_012880.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4329260 rplJ 8087103 rplJ Dickeya dadantii Ech703 50S ribosomal protein L10 YP_002989310.1 4328763 R 579405 CDS YP_002989311.1 242241130 8087104 complement(4329567..4330271) 1 NC_012880.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: kpn:KPN_04361 50S ribosomal protein L1; 50S ribosomal protein L1 4330271 8087104 Dd703_3734 Dickeya dadantii Ech703 50S ribosomal protein L1 YP_002989311.1 4329567 R 579405 CDS YP_002989312.1 242241131 8087105 complement(4330275..4330703) 1 NC_012880.1 KEGG: eta:ETA_01510 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 4330703 8087105 Dd703_3735 Dickeya dadantii Ech703 50S ribosomal protein L11 YP_002989312.1 4330275 R 579405 CDS YP_002989313.1 242241132 8087106 complement(4330850..4331395) 1 NC_012880.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 4331395 nusG 8087106 nusG Dickeya dadantii Ech703 transcription antitermination protein NusG YP_002989313.1 4330850 R 579405 CDS YP_002989314.1 242241133 8087107 complement(4331397..4331780) 1 NC_012880.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 4331780 secE 8087107 secE Dickeya dadantii Ech703 preprotein translocase subunit SecE YP_002989314.1 4331397 R 579405 CDS YP_002989315.1 242241134 8087108 complement(4332021..4333205) 1 NC_012880.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4333205 8087108 Dd703_3738 Dickeya dadantii Ech703 elongation factor Tu YP_002989315.1 4332021 R 579405 CDS YP_002989316.1 242241135 8087113 4334457..4335407 1 NC_012880.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 4335407 8087113 Dd703_3739 Dickeya dadantii Ech703 pantothenate kinase YP_002989316.1 4334457 D 579405 CDS YP_002989317.1 242241136 8087114 complement(4335428..4336387) 1 NC_012880.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 4336387 8087114 Dd703_3740 Dickeya dadantii Ech703 biotin--protein ligase YP_002989317.1 4335428 R 579405 CDS YP_002989318.1 242241137 8087115 complement(4336384..4337421) 1 NC_012880.1 KEGG: eca:ECA0213 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 4337421 8087115 Dd703_3741 Dickeya dadantii Ech703 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002989318.1 4336384 R 579405 CDS YP_002989319.1 242241138 8087121 complement(4343250..4343789) 1 NC_012880.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 4343789 hemG 8087121 hemG Dickeya dadantii Ech703 protoporphyrinogen oxidase YP_002989319.1 4343250 R 579405 CDS YP_002989320.1 242241139 8087122 complement(4343809..4345260) 1 NC_012880.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: eca:ECA0211 potassium transporter; potassium transporter 4345260 8087122 Dd703_3744 Dickeya dadantii Ech703 potassium transporter YP_002989320.1 4343809 R 579405 CDS YP_002989321.1 242241140 8087123 complement(4345302..4345916) 1 NC_012880.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: spe:Spro_0264 hypothetical protein; hypothetical protein 4345916 8087123 Dd703_3745 Dickeya dadantii Ech703 hypothetical protein YP_002989321.1 4345302 R 579405 CDS YP_002989322.1 242241141 8087124 complement(4345916..4347247) 1 NC_012880.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 4347247 8087124 Dd703_3746 Dickeya dadantii Ech703 proline dipeptidase YP_002989322.1 4345916 R 579405 CDS YP_002989323.1 242241142 8087125 4347431..4349623 1 NC_012880.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 4349623 fadB 8087125 fadB Dickeya dadantii Ech703 multifunctional fatty acid oxidation complex subunit alpha YP_002989323.1 4347431 D 579405 CDS YP_002989324.1 242241143 8087126 4349638..4350801 1 NC_012880.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 4350801 fadA 8087126 fadA Dickeya dadantii Ech703 3-ketoacyl-CoA thiolase YP_002989324.1 4349638 D 579405 CDS YP_002989325.1 242241144 8087127 complement(4350955..4351365) 1 NC_012880.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pol:Bpro_4847 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 4351365 8087127 Dd703_3749 Dickeya dadantii Ech703 hypothetical protein YP_002989325.1 4350955 R 579405 CDS YP_002989326.1 242241145 8087128 complement(4351381..4351818) 1 NC_012880.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: yen:YE3422A hypothetical protein; hypothetical protein 4351818 8087128 Dd703_3750 Dickeya dadantii Ech703 hypothetical protein YP_002989326.1 4351381 R 579405 CDS YP_002989327.1 242241146 8087129 complement(4351822..4352154) 1 NC_012880.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: yen:YE3423 transcription regulator ArsR; ArsR family transcriptional regulator 4352154 8087129 Dd703_3751 Dickeya dadantii Ech703 ArsR family transcriptional regulator YP_002989327.1 4351822 R 579405 CDS YP_002989328.1 242241147 8087130 4352270..4353925 1 NC_012880.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: rhodanese; KEGG: aha:AHA_1691 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4353925 8087130 Dd703_3752 Dickeya dadantii Ech703 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002989328.1 4352270 D 579405 CDS YP_002989329.1 242241148 8087131 complement(4354193..4354894) 1 NC_012880.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 4354894 fre 8087131 fre Dickeya dadantii Ech703 FMN reductase YP_002989329.1 4354193 R 579405 CDS YP_002989330.1 242241149 8087132 complement(4354945..4356441) 1 NC_012880.1 TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: eca:ECA0205 3-octaprenyl-4-hydroxybenzoate decarboxylase; UbiD family decarboxylase 4356441 8087132 Dd703_3754 Dickeya dadantii Ech703 UbiD family decarboxylase YP_002989330.1 4354945 R 579405 CDS YP_002989331.1 242241150 8087133 4356624..4357112 1 NC_012880.1 KEGG: eca:ECA0204 transcriptional activator RfaH; TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; SMART: NGN domain protein; transcriptional activator RfaH 4357112 rfaH 8087133 rfaH Dickeya dadantii Ech703 transcriptional activator RfaH YP_002989331.1 4356624 D 579405 CDS YP_002989332.1 242241151 8087134 complement(4357147..4358169) 1 NC_012880.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 4358169 8087134 Dd703_3756 Dickeya dadantii Ech703 delta-aminolevulinic acid dehydratase YP_002989332.1 4357147 R 579405 CDS YP_002989333.1 242241152 8087135 complement(4358174..4358968) 1 NC_012880.1 magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 4358968 8087135 Dd703_3757 Dickeya dadantii Ech703 DNase TatD YP_002989333.1 4358174 R 579405 CDS YP_002989334.1 242241153 8087136 complement(4359091..4359852) 1 NC_012880.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 4359852 8087136 Dd703_3758 Dickeya dadantii Ech703 twin-arginine protein translocation system subunit TatC YP_002989334.1 4359091 R 579405 CDS YP_002989335.1 242241154 8087137 complement(4359856..4360419) 1 NC_012880.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: yen:YE0260 sec-independent protein translocase protein TatB; twin-arginine translocation protein subunit TatB 4360419 8087137 Dd703_3759 Dickeya dadantii Ech703 twin-arginine translocation protein subunit TatB YP_002989335.1 4359856 R 579405 CDS YP_002989336.1 242241155 8087138 complement(4360423..4360680) 1 NC_012880.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: eca:ECA0199 sec-independent protein translocase; twin-arginine translocation protein, TatA/E family subunit 4360680 8087138 Dd703_3760 Dickeya dadantii Ech703 twin-arginine translocation protein, TatA/E family subunit YP_002989336.1 4360423 R 579405 CDS YP_002989337.1 242241156 8087139 complement(4360758..4362395) 1 NC_012880.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 4362395 ubiB 8087139 ubiB Dickeya dadantii Ech703 ubiquinone biosynthesis protein UbiB YP_002989337.1 4360758 R 579405 CDS YP_002989338.1 242241157 8087140 complement(4362392..4363000) 1 NC_012880.1 PFAM: sterol-binding domain protein; KEGG: eca:ECA0197 hypothetical protein; sterol-binding domain-containing protein 4363000 8087140 Dd703_3762 Dickeya dadantii Ech703 sterol-binding domain-containing protein YP_002989338.1 4362392 R 579405 CDS YP_002989339.1 242241158 8087141 complement(4363026..4363781) 1 NC_012880.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: ypa:YPA_0243 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 4363781 8087141 Dd703_3763 Dickeya dadantii Ech703 ubiquinone/menaquinone biosynthesis methyltransferase YP_002989339.1 4363026 R 579405 CDS YP_002989340.1 242241159 8087142 complement(4363945..4365450) 1 NC_012880.1 PFAM: protein of unknown function DUF195; KEGG: eca:ECA0195 DNA recombination protein; hypothetical protein 4365450 8087142 Dd703_3764 Dickeya dadantii Ech703 hypothetical protein YP_002989340.1 4363945 R 579405 CDS YP_002989341.1 242241160 8087143 complement(4365596..4369552) 1 NC_012880.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; aldehyde dehydrogenase; KEGG: spe:Spro_2931 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 4369552 8087143 Dd703_3765 Dickeya dadantii Ech703 delta-1-pyrroline-5-carboxylate dehydrogenase YP_002989341.1 4365596 R 579405 CDS YP_002989342.1 242241161 8087144 4369810..4371309 1 NC_012880.1 TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: eca:ECA4218 sodium/proline symporter; sodium/proline symporter 4371309 8087144 Dd703_3766 Dickeya dadantii Ech703 sodium/proline symporter YP_002989342.1 4369810 D 579405 CDS YP_002989343.1 242241162 8087145 complement(4371348..4371731) 1 NC_012880.1 hypothetical protein 4371731 8087145 Dd703_3767 Dickeya dadantii Ech703 hypothetical protein YP_002989343.1 4371348 R 579405 CDS YP_002989344.1 242241163 8087146 complement(4371810..4373288) 1 NC_012880.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 4373288 8087146 Dd703_3768 Dickeya dadantii Ech703 ketol-acid reductoisomerase YP_002989344.1 4371810 R 579405 CDS YP_002989345.1 242241164 8087147 4373458..4374345 1 NC_012880.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 4374345 8087147 Dd703_3769 Dickeya dadantii Ech703 DNA-binding transcriptional regulator IlvY YP_002989345.1 4373458 D 579405 CDS YP_002989346.1 242241165 8087148 4374345..4375109 1 NC_012880.1 KEGG: eca:ECA4223 hypothetical protein; hypothetical protein 4375109 8087148 Dd703_3770 Dickeya dadantii Ech703 hypothetical protein YP_002989346.1 4374345 D 579405 CDS YP_002989347.1 242241166 8087149 complement(4375112..4375852) 1 NC_012880.1 KEGG: eca:ECA4224 hypothetical protein; hypothetical protein 4375852 8087149 Dd703_3771 Dickeya dadantii Ech703 hypothetical protein YP_002989347.1 4375112 R 579405 CDS YP_002989348.1 242241167 8087150 complement(4376045..4377589) 1 NC_012880.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 4377589 8087150 Dd703_3772 Dickeya dadantii Ech703 threonine dehydratase YP_002989348.1 4376045 R 579405 CDS YP_002989349.1 242241168 8087151 complement(4377595..4379445) 1 NC_012880.1 KEGG: eca:ECA4226 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 4379445 8087151 Dd703_3773 Dickeya dadantii Ech703 dihydroxy-acid dehydratase YP_002989349.1 4377595 R 579405 CDS YP_002989350.1 242241169 8087152 complement(4379525..4380451) 1 NC_012880.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4380451 8087152 Dd703_3774 Dickeya dadantii Ech703 branched-chain amino acid aminotransferase YP_002989350.1 4379525 R 579405 CDS YP_002989351.1 242241170 8087153 complement(4380476..4380733) 1 NC_012880.1 KEGG: eca:ECA4228 acetolactate synthase 2 regulatory subunit; acetolactate synthase 2 regulatory subunit 4380733 ilvM 8087153 ilvM Dickeya dadantii Ech703 acetolactate synthase 2 regulatory subunit YP_002989351.1 4380476 R 579405 CDS YP_002989352.1 242241171 8087154 complement(4380751..4382397) 1 NC_012880.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 4382397 8087154 Dd703_3776 Dickeya dadantii Ech703 acetolactate synthase 2 catalytic subunit YP_002989352.1 4380751 R 579405 CDS YP_002989353.1 242241172 8087155 4383002..4384528 1 NC_012880.1 KEGG: eca:ECA4230 magnesium-chelatase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; Mg chelatase subunit ChlI 4384528 8087155 Dd703_3777 Dickeya dadantii Ech703 Mg chelatase subunit ChlI YP_002989353.1 4383002 D 579405 CDS YP_002989354.1 242241173 8087156 complement(4384591..4384929) 1 NC_012880.1 PFAM: protein of unknown function DUF413; KEGG: eca:ECA4231 hypothetical protein; hypothetical protein 4384929 8087156 Dd703_3778 Dickeya dadantii Ech703 hypothetical protein YP_002989354.1 4384591 R 579405 CDS YP_002989355.1 242241174 8087157 4385049..4385876 1 NC_012880.1 negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 4385876 8087157 Dd703_3779 Dickeya dadantii Ech703 transcriptional regulator HdfR YP_002989355.1 4385049 D 579405 CDS YP_002989356.1 242241175 8087158 4386061..4387098 1 NC_012880.1 KEGG: stm:PSLT042 integrase protein; integrase protein 4387098 8087158 Dd703_3780 Dickeya dadantii Ech703 integrase protein YP_002989356.1 4386061 D 579405 CDS YP_002989357.1 242241176 8087167 complement(4393511..4394398) 1 NC_012880.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 4394398 8087167 Dd703_3782 Dickeya dadantii Ech703 glutamate racemase YP_002989357.1 4393511 R 579405 CDS YP_002989358.1 242241177 8087168 complement(4394343..4396190) 1 NC_012880.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 4396190 btuB 8087168 btuB Dickeya dadantii Ech703 vitamin B12/cobalamin outer membrane transporter YP_002989358.1 4394343 R 579405 CDS YP_002989359.1 242241178 8087169 4396592..4397695 1 NC_012880.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 4397695 8087169 Dd703_3784 Dickeya dadantii Ech703 tRNA (uracil-5-)-methyltransferase YP_002989359.1 4396592 D 579405 CDS YP_002989360.1 242241179 8087170 complement(4397709..4398080) 1 NC_012880.1 PFAM: protein of unknown function DUF1422; KEGG: eca:ECA4240 hypothetical protein; hypothetical protein 4398080 8087170 Dd703_3785 Dickeya dadantii Ech703 hypothetical protein YP_002989360.1 4397709 R 579405 CDS YP_002989361.1 242241180 8087171 complement(4398098..4398736) 1 NC_012880.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 4398736 8087171 Dd703_3786 Dickeya dadantii Ech703 DNA-binding transcriptional repressor FabR YP_002989361.1 4398098 R 579405 CDS YP_002989362.1 242241181 8087172 4398952..4400358 1 NC_012880.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 4400358 8087172 Dd703_3787 Dickeya dadantii Ech703 soluble pyridine nucleotide transhydrogenase YP_002989362.1 4398952 D 579405 CDS YP_002989363.1 242241182 8087173 complement(4400350..4401258) 1 NC_012880.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 4401258 8087173 Dd703_3788 Dickeya dadantii Ech703 DNA-binding transcriptional regulator OxyR YP_002989363.1 4400350 R 579405 CDS YP_002989364.1 242241183 8087174 complement(4401873..4402772) 1 NC_012880.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 4402772 metF 8087174 metF Dickeya dadantii Ech703 5,10-methylenetetrahydrofolate reductase YP_002989364.1 4401873 R 579405 CDS YP_002989365.1 242241184 8087175 complement(4403202..4405637) 1 NC_012880.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 4405637 metL 8087175 metL Dickeya dadantii Ech703 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_002989365.1 4403202 R 579405 CDS YP_002989366.1 242241185 8087176 complement(4405640..4406800) 1 NC_012880.1 KEGG: eca:ECA4252 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase 4406800 8087176 Dd703_3791 Dickeya dadantii Ech703 O-succinylhomoserine (thiol)-lyase YP_002989366.1 4405640 R 579405 CDS YP_002989367.1 242241186 8087177 4406986..4407303 1 NC_012880.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 4407303 8087177 Dd703_3792 Dickeya dadantii Ech703 transcriptional repressor protein MetJ YP_002989367.1 4406986 D 579405 CDS YP_002989368.1 242241187 8087178 complement(4407422..4407637) 1 NC_012880.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: set:SEN3886 50S ribosomal protein L31; 50S ribosomal protein L31 4407637 8087178 Dd703_3793 Dickeya dadantii Ech703 50S ribosomal protein L31 YP_002989368.1 4407422 R 579405 CDS YP_002989369.1 242241188 8087179 4407867..4410062 1 NC_012880.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 4410062 8087179 Dd703_3794 Dickeya dadantii Ech703 primosome assembly protein PriA YP_002989369.1 4407867 D 579405 CDS YP_002989370.1 242241189 8087180 4410372..4411442 1 NC_012880.1 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR 4411442 8087180 Dd703_3795 Dickeya dadantii Ech703 DNA-binding transcriptional regulator CytR YP_002989370.1 4410372 D 579405 CDS YP_002989371.1 242241190 8087181 4411595..4412437 1 NC_012880.1 TIGRFAM: cell division protein FtsN; PFAM: sporulation domain protein; KEGG: eca:ECA4260 cell division protein FtsN; cell division protein FtsN 4412437 8087181 Dd703_3796 Dickeya dadantii Ech703 cell division protein FtsN YP_002989371.1 4411595 D 579405 CDS YP_002989372.1 242241191 8087182 4412638..4413168 1 NC_012880.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 4413168 8087182 Dd703_3797 Dickeya dadantii Ech703 ATP-dependent protease peptidase subunit YP_002989372.1 4412638 D 579405 CDS YP_002989373.1 242241192 8087183 4413178..4414509 1 NC_012880.1 KEGG: yen:YE0104 ATP-dependent protease ATP-binding subunit; TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA-2 domain protein; ATPase AAA; SMART: ATPase AAA; heat shock protein HslVU, ATPase HslU 4414509 8087183 Dd703_3798 Dickeya dadantii Ech703 heat shock protein HslVU, ATPase HslU YP_002989373.1 4413178 D 579405 CDS YP_002989374.1 242241193 8087184 4414616..4415533 1 NC_012880.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4415533 8087184 Dd703_3799 Dickeya dadantii Ech703 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_002989374.1 4414616 D 579405 CDS YP_002989375.1 242241194 8087185 4415661..4416146 1 NC_012880.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 4416146 8087185 Dd703_3800 Dickeya dadantii Ech703 ribonuclease activity regulator protein RraA YP_002989375.1 4415661 D 579405 CDS YP_002989376.1 242241195 8087186 complement(4416196..4416438) 1 NC_012880.1 PFAM: protein of unknown function DUF904; KEGG: yps:YPTB0089 hypothetical protein; hypothetical protein 4416438 8087186 Dd703_3801 Dickeya dadantii Ech703 hypothetical protein YP_002989376.1 4416196 R 579405 CDS YP_002989377.1 242241196 8087187 4416982..4417827 1 NC_012880.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: eca:ECA4266 glycerol uptake facilitator protein; MIP family channel protein 4417827 8087187 Dd703_3802 Dickeya dadantii Ech703 MIP family channel protein YP_002989377.1 4416982 D 579405 CDS YP_002989378.1 242241197 8087188 4417854..4419365 1 NC_012880.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: spe:Spro_4798 glycerol kinase; glycerol kinase 4419365 8087188 Dd703_3803 Dickeya dadantii Ech703 glycerol kinase YP_002989378.1 4417854 D 579405 CDS YP_002989379.1 242241198 8087189 4419497..4420507 1 NC_012880.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 4420507 glpX 8087189 glpX Dickeya dadantii Ech703 fructose 1,6-bisphosphatase II YP_002989379.1 4419497 D 579405 CDS YP_002989380.1 242241199 8087190 4420589..4421332 1 NC_012880.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: esa:ESA_03881 ferredoxin-NADP reductase; ferredoxin-NADP reductase 4421332 8087190 Dd703_3805 Dickeya dadantii Ech703 ferredoxin-NADP reductase YP_002989380.1 4420589 D 579405 CDS YP_002989381.1 242241200 8087191 complement(4421338..4421763) 1 NC_012880.1 PFAM: protein of unknown function DUF805; KEGG: eca:ECA4270 hypothetical protein; hypothetical protein 4421763 8087191 Dd703_3806 Dickeya dadantii Ech703 hypothetical protein YP_002989381.1 4421338 R 579405 CDS YP_002989382.1 242241201 8087192 4421918..4422511 1 NC_012880.1 PFAM: protein of unknown function DUF1454; KEGG: eca:ECA4271 hypothetical protein; hypothetical protein 4422511 8087192 Dd703_3807 Dickeya dadantii Ech703 hypothetical protein YP_002989382.1 4421918 D 579405 CDS YP_002989383.1 242241202 8087193 4422636..4423403 1 NC_012880.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 4423403 tpiA 8087193 tpiA Dickeya dadantii Ech703 triosephosphate isomerase YP_002989383.1 4422636 D 579405 CDS YP_002989384.1 242241203 8087194 4423674..4425077 1 NC_012880.1 KEGG: spe:Spro_1528 bacterial alkaline phosphatase; PFAM: alkaline phosphatase; SMART: alkaline phosphatase; alkaline phosphatase 4425077 8087194 Dd703_3809 Dickeya dadantii Ech703 alkaline phosphatase YP_002989384.1 4423674 D 579405 CDS YP_002989385.1 242241204 8087195 complement(4425169..4426266) 1 NC_012880.1 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 4426266 8087195 Dd703_3810 Dickeya dadantii Ech703 agmatine deiminase YP_002989385.1 4425169 R 579405 CDS YP_002989386.1 242241205 8087196 complement(4426270..4427154) 1 NC_012880.1 TIGRFAM: N-carbamoylputrescine amidase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eca:ECA4274 carbon-nitrogen hydrolase; N-carbamoylputrescine amidase 4427154 8087196 Dd703_3811 Dickeya dadantii Ech703 N-carbamoylputrescine amidase YP_002989386.1 4426270 R 579405 CDS YP_002989387.1 242241206 8087197 complement(4427508..4428470) 1 NC_012880.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 4428470 8087197 Dd703_3812 Dickeya dadantii Ech703 6-phosphofructokinase YP_002989387.1 4427508 R 579405 CDS YP_002989388.1 242241207 8087198 complement(4428680..4429576) 1 NC_012880.1 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F 4429576 fieF 8087198 fieF Dickeya dadantii Ech703 ferrous iron efflux protein F YP_002989388.1 4428680 R 579405 CDS YP_002989389.1 242241208 8087199 complement(4429685..4430161) 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: esa:ESA_00670 hypothetical protein; XRE family transcriptional regulator 4430161 8087199 Dd703_3814 Dickeya dadantii Ech703 XRE family transcriptional regulator YP_002989389.1 4429685 R 579405 CDS YP_002989390.1 242241209 8087200 4430411..4430866 1 NC_012880.1 PFAM: NUDIX hydrolase; KEGG: sea:SeAg_B4799 NUDIX hydrolase; NUDIX hydrolase 4430866 8087200 Dd703_3815 Dickeya dadantii Ech703 NUDIX hydrolase YP_002989390.1 4430411 D 579405 CDS YP_002989391.1 242241210 8087201 complement(4430936..4432432) 1 NC_012880.1 PFAM: Tail Collar domain protein; KEGG: ecz:ECS88_2817 variable tail fiber protein; Tail Collar domain-containing protein 4432432 8087201 Dd703_3816 Dickeya dadantii Ech703 Tail Collar domain-containing protein YP_002989391.1 4430936 R 579405 CDS YP_002989392.1 242241211 8087202 complement(4432696..4433322) 1 NC_012880.1 PFAM: tail assembly chaperone gp38; KEGG: eca:ECA3742 bacteriophage tail fiber assembly protein; tail assembly chaperone gp38 4433322 8087202 Dd703_3817 Dickeya dadantii Ech703 tail assembly chaperone gp38 YP_002989392.1 4432696 R 579405 CDS YP_002989393.1 242241212 8087203 complement(4433319..4434992) 1 NC_012880.1 PFAM: Tail Collar domain protein; KEGG: eca:ECA2608 bacteriophage variable tail fiber protein H; Tail Collar domain-containing protein 4434992 8087203 Dd703_3818 Dickeya dadantii Ech703 Tail Collar domain-containing protein YP_002989393.1 4433319 R 579405 CDS YP_002989394.1 242241213 8087204 complement(4434989..4435597) 1 NC_012880.1 TIGRFAM: phage tail protein I; KEGG: eca:ECA2609 phage tail protein I; phage tail protein I 4435597 8087204 Dd703_3819 Dickeya dadantii Ech703 phage tail protein I YP_002989394.1 4434989 R 579405 CDS YP_002989395.1 242241214 8087205 complement(4435590..4436486) 1 NC_012880.1 PFAM: Baseplate J family protein; KEGG: eca:ECA2610 phage baseplate assembly protein J; baseplate J family protein 4436486 8087205 Dd703_3820 Dickeya dadantii Ech703 baseplate J family protein YP_002989395.1 4435590 R 579405 CDS YP_002989396.1 242241215 8087206 complement(4436473..4436841) 1 NC_012880.1 PFAM: GPW/gp25 family protein; KEGG: eca:ECA2611 phage baseplate assembly protein W; GPW/gp25 family protein 4436841 8087206 Dd703_3821 Dickeya dadantii Ech703 GPW/gp25 family protein YP_002989396.1 4436473 R 579405 CDS YP_002989397.1 242241216 8087207 complement(4436838..4437419) 1 NC_012880.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: eca:ECA2612 baseplate assembly protein V; phage baseplate assembly protein V 4437419 8087207 Dd703_3822 Dickeya dadantii Ech703 phage baseplate assembly protein V YP_002989397.1 4436838 R 579405 CDS YP_002989398.1 242241217 8087208 complement(4437416..4438054) 1 NC_012880.1 TIGRFAM: phage virion morphogenesis protein; PFAM: virion morphogenesis ( tail completion) protein; KEGG: sbo:SBO_1399 phage tail completion protein; phage virion morphogenesis protein 4438054 8087208 Dd703_3823 Dickeya dadantii Ech703 phage virion morphogenesis protein YP_002989398.1 4437416 R 579405 CDS YP_002989399.1 242241218 8087209 complement(4438051..4438509) 1 NC_012880.1 PFAM: P2 phage tail completion R family protein; KEGG: ecg:E2348C_1821 predicted tail protein; P2 phage tail completion R family protein 4438509 8087209 Dd703_3824 Dickeya dadantii Ech703 P2 phage tail completion R family protein YP_002989399.1 4438051 R 579405 CDS YP_002989400.1 242241219 8087210 complement(4438623..4439060) 1 NC_012880.1 KEGG: ecq:ECED1_0887 hypothetical protein; exported protein; hypothetical protein 4439060 8087210 Dd703_3825 Dickeya dadantii Ech703 hypothetical protein YP_002989400.1 4438623 R 579405 CDS YP_002989401.1 242241220 8087211 complement(4439057..4439602) 1 NC_012880.1 PFAM: glycoside hydrolase family 24; KEGG: ecq:ECED1_0888 prophage lysozyme responsible for host cell lysis (muramidase) (endolysin); glycoside hydrolase family protein 4439602 8087211 Dd703_3826 Dickeya dadantii Ech703 glycoside hydrolase family protein YP_002989401.1 4439057 R 579405 CDS YP_002989402.1 242241221 8087212 complement(4439586..4439888) 1 NC_012880.1 KEGG: ecq:ECED1_0889 hypothetical protein; hypothetical protein 4439888 8087212 Dd703_3827 Dickeya dadantii Ech703 hypothetical protein YP_002989402.1 4439586 R 579405 CDS YP_002989403.1 242241222 8087213 complement(4439857..4440078) 1 NC_012880.1 PFAM: tail X family protein; KEGG: ecq:ECED1_0890 tail protein X from prophage; tail X family protein 4440078 8087213 Dd703_3828 Dickeya dadantii Ech703 tail X family protein YP_002989403.1 4439857 R 579405 CDS YP_002989404.1 242241223 8087214 complement(4440078..4440569) 1 NC_012880.1 PFAM: head completion protein; KEGG: ecq:ECED1_0891 phage head completion protein L; head completion protein 4440569 8087214 Dd703_3829 Dickeya dadantii Ech703 head completion protein YP_002989404.1 4440078 R 579405 CDS YP_002989405.1 242241224 8087215 complement(4440668..4441549) 1 NC_012880.1 PFAM: small terminase subunit; KEGG: eca:ECA2620 phage terminase, endonuclease small subunit M; small terminase subunit 4441549 8087215 Dd703_3830 Dickeya dadantii Ech703 small terminase subunit YP_002989405.1 4440668 R 579405 CDS YP_002989406.1 242241225 8087216 complement(4441592..4442647) 1 NC_012880.1 TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; KEGG: eca:ECA2621 major phage capsid protein N precursor; phage major capsid protein, P2 family 4442647 8087216 Dd703_3831 Dickeya dadantii Ech703 phage major capsid protein, P2 family YP_002989406.1 4441592 R 579405 CDS YP_002989407.1 242241226 8087217 complement(4442673..4443512) 1 NC_012880.1 PFAM: capsid scaffolding; KEGG: eca:ECA2622 capsid scaffolding protein O; capsid scaffolding 4443512 8087217 Dd703_3832 Dickeya dadantii Ech703 capsid scaffolding YP_002989407.1 4442673 R 579405 CDS YP_002989408.1 242241227 8087218 4443671..4445398 1 NC_012880.1 PFAM: protein of unknown function DUF264; terminase ATPase; KEGG: eck:EC55989_2105 terminase, ATPase (GpP); hypothetical protein 4445398 8087218 Dd703_3833 Dickeya dadantii Ech703 hypothetical protein YP_002989408.1 4443671 D 579405 CDS YP_002989409.1 242241228 8087219 4445398..4446450 1 NC_012880.1 TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: eca:ECA2624 phage capsid portal protein Q; phage portal protein, PBSX family 4446450 8087219 Dd703_3834 Dickeya dadantii Ech703 phage portal protein, PBSX family YP_002989409.1 4445398 D 579405 CDS YP_002989410.1 242241229 8087220 complement(4446899..4448011) 1 NC_012880.1 PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pmr:PMI1994 transcriptional regulator; hypothetical protein 4448011 8087220 Dd703_3835 Dickeya dadantii Ech703 hypothetical protein YP_002989410.1 4446899 R 579405 CDS YP_002989411.1 242241230 8087221 complement(4448025..4448618) 1 NC_012880.1 KEGG: plu:plu3938 hypothetical protein; hypothetical protein 4448618 8087221 Dd703_3836 Dickeya dadantii Ech703 hypothetical protein YP_002989411.1 4448025 R 579405 CDS YP_002989412.1 242241231 8087222 complement(4448798..4450852) 1 NC_012880.1 PFAM: replication gene A; KEGG: ypb:YPTS_3589 replication gene A; replication protein A 4450852 8087222 Dd703_3837 Dickeya dadantii Ech703 replication protein A YP_002989412.1 4448798 R 579405 CDS YP_002989413.1 242241232 8087223 complement(4450849..4452075) 1 NC_012880.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: ent:Ent638_1349 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 4452075 8087223 Dd703_3838 Dickeya dadantii Ech703 phosphoadenosine phosphosulfate reductase YP_002989413.1 4450849 R 579405 CDS YP_002989414.1 242241233 8087224 complement(4452075..4453031) 1 NC_012880.1 KEGG: ypy:YPK_0888 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 4453031 8087224 Dd703_3839 Dickeya dadantii Ech703 DNA adenine methylase YP_002989414.1 4452075 R 579405 CDS YP_002989415.1 242241234 8087225 complement(4453028..4453252) 1 NC_012880.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: ent:Ent638_3507 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 4453252 8087225 Dd703_3840 Dickeya dadantii Ech703 TraR/DksA family transcriptional regulator YP_002989415.1 4453028 R 579405 CDS YP_002989416.1 242241235 8087226 complement(4453252..4453482) 1 NC_012880.1 KEGG: eca:ECA2631 hypothetical protein; hypothetical protein 4453482 8087226 Dd703_3841 Dickeya dadantii Ech703 hypothetical protein YP_002989416.1 4453252 R 579405 CDS YP_002989417.1 242241236 8087227 complement(4453554..4453883) 1 NC_012880.1 KEGG: ypb:YPTS_3592 hypothetical protein; hypothetical protein 4453883 8087227 Dd703_3842 Dickeya dadantii Ech703 hypothetical protein YP_002989417.1 4453554 R 579405 CDS YP_002989418.1 242241237 8087228 complement(4453896..4454051) 1 NC_012880.1 hypothetical protein 4454051 8087228 Dd703_3843 Dickeya dadantii Ech703 hypothetical protein YP_002989418.1 4453896 R 579405 CDS YP_002989419.1 242241238 8087229 complement(4454165..4454371) 1 NC_012880.1 KEGG: eca:ECA2634 hypothetical protein; hypothetical protein 4454371 8087229 Dd703_3844 Dickeya dadantii Ech703 hypothetical protein YP_002989419.1 4454165 R 579405 CDS YP_002989420.1 242241239 8087230 complement(4454382..4454654) 1 NC_012880.1 KEGG: ecm:EcSMS35_4308 regulatory protein Cox; regulatory protein Cox 4454654 8087230 Dd703_3845 Dickeya dadantii Ech703 regulatory protein Cox YP_002989420.1 4454382 R 579405 CDS YP_002989421.1 242241240 8087231 4454780..4455247 1 NC_012880.1 KEGG: conserved hypothetical protein; hypothetical protein 4455247 8087231 Dd703_3846 Dickeya dadantii Ech703 hypothetical protein YP_002989421.1 4454780 D 579405 CDS YP_002989422.1 242241241 8087232 complement(4455216..4455431) 1 NC_012880.1 hypothetical protein 4455431 8087232 Dd703_3847 Dickeya dadantii Ech703 hypothetical protein YP_002989422.1 4455216 R 579405 CDS YP_002989423.1 242241242 8087233 4455952..4456935 1 NC_012880.1 PFAM: integrase family protein; KEGG: ecm:EcSMS35_4307 site-specific recombinase, phage integrase family; integrase family protein 4456935 8087233 Dd703_3848 Dickeya dadantii Ech703 integrase family protein YP_002989423.1 4455952 D 579405 CDS YP_002989424.1 242241243 8087234 complement(4457179..4457703) 1 NC_012880.1 KEGG: eca:ECA4310 stress resistance protein; stress resistance protein 4457703 8087234 Dd703_3849 Dickeya dadantii Ech703 stress resistance protein YP_002989424.1 4457179 R 579405 CDS YP_002989425.1 242241244 8087235 4457857..4458555 1 NC_012880.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR 4458555 8087235 Dd703_3850 Dickeya dadantii Ech703 DNA-binding transcriptional regulator CpxR YP_002989425.1 4457857 D 579405 CDS YP_002989426.1 242241245 8087236 4458552..4459922 1 NC_012880.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 4459922 cpxA 8087236 cpxA Dickeya dadantii Ech703 two-component sensor protein YP_002989426.1 4458552 D 579405 CDS YP_002989427.1 242241246 8087237 4460198..4462396 1 NC_012880.1 KEGG: eca:ECA4313 hypothetical protein; hypothetical protein 4462396 8087237 Dd703_3852 Dickeya dadantii Ech703 hypothetical protein YP_002989427.1 4460198 D 579405 CDS YP_002989428.1 242241247 8087238 4462366..4463148 1 NC_012880.1 KEGG: eca:ECA4314 hypothetical protein; hypothetical protein 4463148 8087238 Dd703_3853 Dickeya dadantii Ech703 hypothetical protein YP_002989428.1 4462366 D 579405 CDS YP_002989429.1 242241248 8087239 complement(4463257..4463730) 1 NC_012880.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: eca:ECA4315 RNA-methyltransferase; tRNA/rRNA methyltransferase SpoU 4463730 8087239 Dd703_3854 Dickeya dadantii Ech703 tRNA/rRNA methyltransferase SpoU YP_002989429.1 4463257 R 579405 CDS YP_002989430.1 242241249 8087240 4463867..4464151 1 NC_012880.1 KEGG: eca:ECA4316 hypothetical protein; hypothetical protein 4464151 8087240 Dd703_3855 Dickeya dadantii Ech703 hypothetical protein YP_002989430.1 4463867 D 579405 CDS YP_002989431.1 242241250 8087241 complement(4464194..4465150) 1 NC_012880.1 PFAM: Auxin Efflux Carrier; KEGG: eca:ECA4317 transporter; auxin efflux carrier family protein 4465150 8087241 Dd703_3856 Dickeya dadantii Ech703 auxin efflux carrier family protein YP_002989431.1 4464194 R 579405 CDS YP_002989432.1 242241251 8087242 complement(4465323..4466069) 1 NC_012880.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 4466069 ugpQ 8087242 ugpQ Dickeya dadantii Ech703 glycerophosphodiester phosphodiesterase YP_002989432.1 4465323 R 579405 CDS YP_002989433.1 242241252 8087243 complement(4466066..4467142) 1 NC_012880.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 4467142 ugpC 8087243 ugpC Dickeya dadantii Ech703 glycerol-3-phosphate transporter ATP-binding subunit YP_002989433.1 4466066 R 579405 CDS YP_002989434.1 242241253 8087244 complement(4467148..4467996) 1 NC_012880.1 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 4467996 8087244 Dd703_3859 Dickeya dadantii Ech703 glycerol-3-phosphate transporter membrane protein YP_002989434.1 4467148 R 579405 CDS YP_002989435.1 242241254 8087245 complement(4468023..4468910) 1 NC_012880.1 with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 4468910 8087245 Dd703_3860 Dickeya dadantii Ech703 glycerol-3-phosphate transporter permease YP_002989435.1 4468023 R 579405 CDS YP_002989436.1 242241255 8087246 complement(4468978..4470297) 1 NC_012880.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 4470297 8087246 Dd703_3861 Dickeya dadantii Ech703 glycerol-3-phosphate transporter periplasmic binding protein YP_002989436.1 4468978 R 579405 CDS YP_002989437.1 242241256 8087247 4471692..4473359 1 NC_012880.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4332 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4473359 8087247 Dd703_3862 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989437.1 4471692 D 579405 CDS YP_002989438.1 242241257 8087248 4473896..4475578 1 NC_012880.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: aav:Aave_4495 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4475578 8087248 Dd703_3863 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989438.1 4473896 D 579405 CDS YP_002989439.1 242241258 8087249 4476080..4477711 1 NC_012880.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4335 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4477711 8087249 Dd703_3864 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989439.1 4476080 D 579405 CDS YP_002989440.1 242241259 8087250 4478453..4480108 1 NC_012880.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4335 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4480108 8087250 Dd703_3865 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989440.1 4478453 D 579405 CDS YP_002989441.1 242241260 8087251 4480706..4482343 1 NC_012880.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4335 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4482343 8087251 Dd703_3866 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer YP_002989441.1 4480706 D 579405 CDS YP_002989442.1 242241261 8087252 complement(4482505..4483689) 1 NC_012880.1 PFAM: aminotransferase class I and II; KEGG: eca:ECA4336 aminotransferase; GntR family transcriptional regulator 4483689 8087252 Dd703_3867 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002989442.1 4482505 R 579405 CDS YP_002989443.1 242241262 8087253 complement(4483763..4484464) 1 NC_012880.1 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transporter; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 4484464 livF 8087253 livF Dickeya dadantii Ech703 leucine/isoleucine/valine transporter ATP-binding subunit YP_002989443.1 4483763 R 579405 CDS YP_002989444.1 242241263 8087254 complement(4484470..4485240) 1 NC_012880.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 4485240 livG 8087254 livG Dickeya dadantii Ech703 leucine/isoleucine/valine transporter ATP-binding subunit YP_002989444.1 4484470 R 579405 CDS YP_002989445.1 242241264 8087255 complement(4485237..4486514) 1 NC_012880.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 4486514 livM 8087255 livM Dickeya dadantii Ech703 leucine/isoleucine/valine transporter permease subunit YP_002989445.1 4485237 R 579405 CDS YP_002989446.1 242241265 8087256 complement(4486511..4487437) 1 NC_012880.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease subunit LivH 4487437 8087256 Dd703_3871 Dickeya dadantii Ech703 branched-chain amino acid transporter permease subunit LivH YP_002989446.1 4486511 R 579405 CDS YP_002989447.1 242241266 8087257 complement(4487517..4488629) 1 NC_012880.1 PFAM: extracellular ligand-binding receptor; KEGG: eca:ECA4341 leucine-specific binding protein; extracellular ligand-binding receptor 4488629 8087257 Dd703_3872 Dickeya dadantii Ech703 extracellular ligand-binding receptor YP_002989447.1 4487517 R 579405 CDS YP_002989448.1 242241267 8087258 4489030..4489461 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA4342 acetyltransferase; N-acetyltransferase GCN5 4489461 8087258 Dd703_3873 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002989448.1 4489030 D 579405 CDS YP_002989449.1 242241268 8087259 complement(4489519..4490376) 1 NC_012880.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 4490376 8087259 Dd703_3874 Dickeya dadantii Ech703 RNA polymerase factor sigma-32 YP_002989449.1 4489519 R 579405 CDS YP_002989450.1 242241269 8087260 complement(4490678..4491649) 1 NC_012880.1 ABC transporter membrane protein; cell division protein FtsX 4491649 ftsX 8087260 ftsX Dickeya dadantii Ech703 cell division protein FtsX YP_002989450.1 4490678 R 579405 CDS YP_002989451.1 242241270 8087261 complement(4491636..4492307) 1 NC_012880.1 KEGG: sgl:SG0085 cell division protein FtsE; TIGRFAM: type II (general) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA; type II (general) Secretory Pathway (IISP) Family protein 4492307 8087261 Dd703_3876 Dickeya dadantii Ech703 type II (general) Secretory Pathway (IISP) Family protein YP_002989451.1 4491636 R 579405 CDS YP_002989452.1 242241271 8087262 complement(4492313..4493611) 1 NC_012880.1 KEGG: eca:ECA4346 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; signal recognition particle-docking protein FtsY 4493611 8087262 Dd703_3877 Dickeya dadantii Ech703 signal recognition particle-docking protein FtsY YP_002989452.1 4492313 R 579405 CDS YP_002989453.1 242241272 8087263 4494015..4494614 1 NC_012880.1 catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase 4494614 rsmD 8087263 rsmD Dickeya dadantii Ech703 16S rRNA m(2)G966-methyltransferase YP_002989453.1 4494015 D 579405 CDS YP_002989454.1 242241273 8087264 4494614..4494904 1 NC_012880.1 PFAM: protein of unknown function DUF1145; KEGG: eca:ECA4348 hypothetical protein; hypothetical protein 4494904 8087264 Dd703_3879 Dickeya dadantii Ech703 hypothetical protein YP_002989454.1 4494614 D 579405 CDS YP_002989455.1 242241274 8087265 complement(4494955..4495281) 1 NC_012880.1 PFAM: Domain of unknown function DUF1820; KEGG: eca:ECA4350 hypothetical protein; hypothetical protein 4495281 8087265 Dd703_3880 Dickeya dadantii Ech703 hypothetical protein YP_002989455.1 4494955 R 579405 CDS YP_002989456.1 242241275 8087266 4495428..4496057 1 NC_012880.1 PFAM: YhhN family protein; KEGG: eca:ECA4351 hypothetical protein; hypothetical protein 4496057 8087266 Dd703_3881 Dickeya dadantii Ech703 hypothetical protein YP_002989456.1 4495428 D 579405 CDS YP_002989457.1 242241276 8087267 complement(4496114..4496359) 1 NC_012880.1 PFAM: SirA family protein; KEGG: eca:ECA4353 cell developmental protein SirA; SirA family protein 4496359 8087267 Dd703_3882 Dickeya dadantii Ech703 SirA family protein YP_002989457.1 4496114 R 579405 CDS YP_002989458.1 242241277 8087268 4496623..4497294 1 NC_012880.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: eca:ECA4354 hypothetical protein; hypothetical protein 4497294 8087268 Dd703_3883 Dickeya dadantii Ech703 hypothetical protein YP_002989458.1 4496623 D 579405 CDS YP_002989459.1 242241278 8087269 4497486..4498058 1 NC_012880.1 KEGG: kpe:KPK_0275 lipoprotein; hypothetical protein 4498058 8087269 Dd703_3884 Dickeya dadantii Ech703 hypothetical protein YP_002989459.1 4497486 D 579405 CDS YP_002989460.1 242241279 8087270 complement(4498127..4499335) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4358 hypothetical protein; major facilitator superfamily transporter 4499335 8087270 Dd703_3885 Dickeya dadantii Ech703 major facilitator superfamily transporter YP_002989460.1 4498127 R 579405 CDS YP_002989461.1 242241280 8087271 4499598..4500596 1 NC_012880.1 TIGRFAM: ribonuclease; PFAM: ribonuclease BN; KEGG: spe:Spro_4744 ribonuclease; ribonuclease 4500596 8087271 Dd703_3886 Dickeya dadantii Ech703 ribonuclease YP_002989461.1 4499598 D 579405 CDS YP_002989462.1 242241281 8087272 4500781..4501713 1 NC_012880.1 PFAM: PfkB domain protein; KEGG: eca:ECA4360 2-dehydro-3-deoxygluconokinase; PfkB domain-containing protein 4501713 8087272 Dd703_3887 Dickeya dadantii Ech703 PfkB domain-containing protein YP_002989462.1 4500781 D 579405 CDS YP_002989463.1 242241282 8087273 complement(4501896..4502018) 1 NC_012880.1 hypothetical protein 4502018 8087273 Dd703_3888 Dickeya dadantii Ech703 hypothetical protein YP_002989463.1 4501896 R 579405 CDS YP_002989464.1 242241283 8087274 complement(4502945..4504420) 1 NC_012880.1 PFAM: peptidase M16 domain protein; KEGG: eca:ECA4361 peptidase; peptidase M16 domain-containing protein 4504420 8087274 Dd703_3889 Dickeya dadantii Ech703 peptidase M16 domain-containing protein YP_002989464.1 4502945 R 579405 CDS YP_002989465.1 242241284 8087275 complement(4504692..4505984) 1 NC_012880.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 4505984 8087275 Dd703_3890 Dickeya dadantii Ech703 C4-dicarboxylate transporter DctA YP_002989465.1 4504692 R 579405 CDS YP_002989466.1 242241285 8087276 complement(4506484..4507482) 1 NC_012880.1 PFAM: glycoside hydrolase family 8; KEGG: eta:ETA_33880 minor endoglucanase Y precursor (endo-1,4-beta-glucanase Y); cellulase 4507482 8087276 Dd703_3891 Dickeya dadantii Ech703 cellulase YP_002989466.1 4506484 R 579405 CDS YP_002989467.1 242241286 8087277 complement(4507479..4507964) 1 NC_012880.1 KEGG: eta:ETA_33890 cellulose synthase operon protein D; cellulose synthase operon protein D 4507964 8087277 Dd703_3892 Dickeya dadantii Ech703 cellulose synthase operon protein D YP_002989467.1 4507479 R 579405 CDS YP_002989468.1 242241287 8087278 complement(4507967..4511962) 1 NC_012880.1 PFAM: cellulose synthase operon C domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: eta:ETA_33900 cellulose synthase operon protein C; cellulose synthase operon C domain-containing protein 4511962 8087278 Dd703_3893 Dickeya dadantii Ech703 cellulose synthase operon C domain-containing protein YP_002989468.1 4507967 R 579405 CDS YP_002989469.1 242241288 8087279 complement(4511974..4514523) 1 NC_012880.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 4514523 8087279 Dd703_3894 Dickeya dadantii Ech703 cellulose synthase regulator protein YP_002989469.1 4511974 R 579405 CDS YP_002989470.1 242241289 8087280 complement(4514520..4516628) 1 NC_012880.1 TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: eta:ETA_33920 cellulose synthase, cellulose synthase operon protein A; cellulose synthase catalytic subunit 4516628 8087280 Dd703_3895 Dickeya dadantii Ech703 cellulose synthase catalytic subunit YP_002989470.1 4514520 R 579405 CDS YP_002989471.1 242241290 8087281 complement(4516717..4517514) 1 NC_012880.1 TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: cobyrinic acid ac-diamide synthase; KEGG: ent:Ent638_3941 hypothetical protein; cellulose synthase operon protein YhjQ 4517514 8087281 Dd703_3896 Dickeya dadantii Ech703 cellulose synthase operon protein YhjQ YP_002989471.1 4516717 R 579405 CDS YP_002989472.1 242241291 8087282 complement(4517505..4518113) 1 NC_012880.1 KEGG: ent:Ent638_3942 hypothetical protein; hypothetical protein 4518113 8087282 Dd703_3897 Dickeya dadantii Ech703 hypothetical protein YP_002989472.1 4517505 R 579405 CDS YP_002989473.1 242241292 8087283 complement(4518546..4519448) 1 NC_012880.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA4384 amino acid metabolite efflux pump; hypothetical protein 4519448 8087283 Dd703_3898 Dickeya dadantii Ech703 hypothetical protein YP_002989473.1 4518546 R 579405 CDS YP_002989474.1 242241293 8087284 complement(4519445..4519582) 1 NC_012880.1 hypothetical protein 4519582 8087284 Dd703_3899 Dickeya dadantii Ech703 hypothetical protein YP_002989474.1 4519445 R 579405 CDS YP_002989475.1 242241294 8087285 4519667..4520359 1 NC_012880.1 PFAM: hypothetical protein; KEGG: eca:ECA3869 transcriptional regulator; hypothetical protein 4520359 8087285 Dd703_3900 Dickeya dadantii Ech703 hypothetical protein YP_002989475.1 4519667 D 579405 CDS YP_002989476.1 242241295 8087286 4520476..4520844 1 NC_012880.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_C_1587 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4520844 8087286 Dd703_3901 Dickeya dadantii Ech703 glyoxalase/bleomycin resistance protein/dioxygenase YP_002989476.1 4520476 D 579405 CDS YP_002989477.1 242241296 8087287 4520963..4522366 1 NC_012880.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: spe:Spro_0112 transcriptional regulator; GntR family transcriptional regulator 4522366 8087287 Dd703_3902 Dickeya dadantii Ech703 GntR family transcriptional regulator YP_002989477.1 4520963 D 579405 CDS YP_002989478.1 242241297 8087288 complement(4522527..4523546) 1 NC_012880.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 4523546 dppF 8087288 dppF Dickeya dadantii Ech703 dipeptide transporter ATP-binding subunit YP_002989478.1 4522527 R 579405 CDS YP_002989479.1 242241298 8087289 complement(4523543..4524523) 1 NC_012880.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transporter DppABCDF; dipeptide transporter ATP-binding subunit 4524523 dppD 8087289 dppD Dickeya dadantii Ech703 dipeptide transporter ATP-binding subunit YP_002989479.1 4523543 R 579405 CDS YP_002989480.1 242241299 8087290 complement(4524537..4525436) 1 NC_012880.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4392 dipeptide transporter; dipeptide transporter 4525436 8087290 Dd703_3905 Dickeya dadantii Ech703 dipeptide transporter YP_002989480.1 4524537 R 579405 CDS YP_002989481.1 242241300 8087291 complement(4525451..4526470) 1 NC_012880.1 transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 4526470 8087291 Dd703_3906 Dickeya dadantii Ech703 dipeptide transporter permease DppB YP_002989481.1 4525451 R 579405 CDS YP_002989482.1 242241301 8087292 complement(4526720..4528327) 1 NC_012880.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4394 periplasmic dipeptide transporter; family 5 extracellular solute-binding protein 4528327 8087292 Dd703_3907 Dickeya dadantii Ech703 family 5 extracellular solute-binding protein YP_002989482.1 4526720 R 579405 CDS YP_002989483.1 242241302 8087293 4529437..4530777 1 NC_012880.1 PFAM: citrate carrier protein; KEGG: eca:ECA4395 Na(+)-malate symporter; citrate carrier protein 4530777 8087293 Dd703_3908 Dickeya dadantii Ech703 citrate carrier protein YP_002989483.1 4529437 D 579405 CDS YP_002989484.1 242241303 8087294 complement(4531219..4531941) 1 NC_012880.1 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR 4531941 8087294 Dd703_3909 Dickeya dadantii Ech703 DNA-binding transcriptional activator DcuR YP_002989484.1 4531219 R 579405 CDS YP_002989485.1 242241304 8087295 complement(4531934..4533547) 1 NC_012880.1 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS 4533547 8087295 Dd703_3910 Dickeya dadantii Ech703 sensory histidine kinase DcuS YP_002989485.1 4531934 R 579405 CDS YP_002989486.1 242241305 8087296 complement(4533702..4533812) 1 NC_012880.1 hypothetical protein 4533812 8087296 Dd703_3911 Dickeya dadantii Ech703 hypothetical protein YP_002989486.1 4533702 R 579405 CDS YP_002989487.1 242241306 8087297 4534174..4535625 1 NC_012880.1 TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: kpe:KPK_2908 tartrate carrier; anion transporter 4535625 8087297 Dd703_3912 Dickeya dadantii Ech703 anion transporter YP_002989487.1 4534174 D 579405 CDS YP_002989488.1 242241307 8087298 complement(4535716..4536165) 1 NC_012880.1 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 4536165 8087298 Dd703_3913 Dickeya dadantii Ech703 heat shock chaperone IbpB YP_002989488.1 4535716 R 579405 CDS YP_002989489.1 242241308 8087299 complement(4536275..4536688) 1 NC_012880.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 4536688 8087299 Dd703_3914 Dickeya dadantii Ech703 heat shock protein IbpA YP_002989489.1 4536275 R 579405 CDS YP_002989490.1 242241309 8087300 4536959..4537330 1 NC_012880.1 PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 hypothetical protein; hypothetical protein 4537330 8087300 Dd703_3915 Dickeya dadantii Ech703 hypothetical protein YP_002989490.1 4536959 D 579405 CDS YP_002989491.1 242241310 8087301 complement(4537324..4538328) 1 NC_012880.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sgl:SG2371 transcriptional regulator; LacI family transcriptional regulator 4538328 8087301 Dd703_3916 Dickeya dadantii Ech703 LacI family transcriptional regulator YP_002989491.1 4537324 R 579405 CDS YP_002989492.1 242241311 8087302 complement(4538429..4539769) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: sed:SeD_A0233 major facilitator family transporter; major facilitator superfamily protein 4539769 8087302 Dd703_3917 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002989492.1 4538429 R 579405 CDS YP_002989493.1 242241312 8087303 complement(4539924..4540976) 1 NC_012880.1 KEGG: pmr:PMI2938 hypothetical protein; hypothetical protein 4540976 8087303 Dd703_3918 Dickeya dadantii Ech703 hypothetical protein YP_002989493.1 4539924 R 579405 CDS YP_002989494.1 242241313 8087304 complement(4540989..4541933) 1 NC_012880.1 PFAM: dihydrodipicolinate synthetase; KEGG: pmr:PMI2939 dihydrodipicolinate synthase-family protein; dihydrodipicolinate synthetase 4541933 8087304 Dd703_3919 Dickeya dadantii Ech703 dihydrodipicolinate synthetase YP_002989494.1 4540989 R 579405 CDS YP_002989495.1 242241314 8087305 complement(4541937..4543589) 1 NC_012880.1 PFAM: L-fucose isomerase _2 domain protein; KEGG: pmr:PMI2940 hypothetical protein; L-fucose isomerase 4543589 8087305 Dd703_3920 Dickeya dadantii Ech703 L-fucose isomerase YP_002989495.1 4541937 R 579405 CDS YP_002989496.1 242241315 8087306 complement(4543638..4545224) 1 NC_012880.1 TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: pmr:PMI2941 probable carbohydrate kinase; FGGY-family pentulose kinase 4545224 8087306 Dd703_3921 Dickeya dadantii Ech703 FGGY-family pentulose kinase YP_002989496.1 4543638 R 579405 CDS YP_002989497.1 242241316 8087307 4545316..4545444 1 NC_012880.1 hypothetical protein 4545444 8087307 Dd703_3922 Dickeya dadantii Ech703 hypothetical protein YP_002989497.1 4545316 D 579405 CDS YP_002989498.1 242241317 8087308 complement(4545473..4546756) 1 NC_012880.1 KEGG: eca:ECA4405 hypothetical protein; hypothetical protein 4546756 8087308 Dd703_3923 Dickeya dadantii Ech703 hypothetical protein YP_002989498.1 4545473 R 579405 CDS YP_002989499.1 242241318 8087309 4546995..4547252 1 NC_012880.1 PFAM: protein of unknown function DUF1471; KEGG: eca:ECA4406 hypothetical protein; hypothetical protein 4547252 8087309 Dd703_3924 Dickeya dadantii Ech703 hypothetical protein YP_002989499.1 4546995 D 579405 CDS YP_002989500.1 242241319 8087310 complement(4547405..4548223) 1 NC_012880.1 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase 4548223 8087310 Dd703_3925 Dickeya dadantii Ech703 sugar phosphatase YP_002989500.1 4547405 R 579405 CDS YP_002989501.1 242241320 8087311 4548455..4550452 1 NC_012880.1 PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; KEGG: esa:ESA_pESA3p05532 hypothetical protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 4550452 8087311 Dd703_3926 Dickeya dadantii Ech703 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_002989501.1 4548455 D 579405 CDS YP_002989502.1 242241321 8087312 complement(4550616..4551050) 1 NC_012880.1 PFAM: UspA domain protein; KEGG: esa:ESA_04226 hypothetical protein; UspA domain-containing protein 4551050 8087312 Dd703_3927 Dickeya dadantii Ech703 UspA domain-containing protein YP_002989502.1 4550616 R 579405 CDS YP_002989503.1 242241322 8087313 complement(4551097..4551273) 1 NC_012880.1 hypothetical protein 4551273 8087313 Dd703_3928 Dickeya dadantii Ech703 hypothetical protein YP_002989503.1 4551097 R 579405 CDS YP_002989504.1 242241323 8087314 4551684..4552022 1 NC_012880.1 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB 4552022 8087314 Dd703_3929 Dickeya dadantii Ech703 universal stress protein UspB YP_002989504.1 4551684 D 579405 CDS YP_002989505.1 242241324 8087315 complement(4552153..4553667) 1 NC_012880.1 PFAM: phosphate transporter; KEGG: eca:ECA0048 low-affinity inorganic phosphate transporter; phosphate transporter 4553667 8087315 Dd703_3930 Dickeya dadantii Ech703 phosphate transporter YP_002989505.1 4552153 R 579405 CDS YP_002989506.1 242241325 8087316 4553986..4555179 1 NC_012880.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: eca:ECA0047 hypothetical protein; hypothetical protein 4555179 8087316 Dd703_3931 Dickeya dadantii Ech703 hypothetical protein YP_002989506.1 4553986 D 579405 CDS YP_002989507.1 242241326 8087317 complement(4555201..4557786) 1 NC_012880.1 heme-regulated phosphodiesterase with phosphodiesterase activity with cAMP but not with cGMP, bis(p-nitrophenyl) phosphate or p-nitrophenyl phosphate; cAMP phosphodiesterase 4557786 8087317 Dd703_3932 Dickeya dadantii Ech703 cAMP phosphodiesterase YP_002989507.1 4555201 R 579405 CDS YP_002989508.1 242241327 8087318 4558431..4558607 1 NC_012880.1 hypothetical protein 4558607 8087318 Dd703_3933 Dickeya dadantii Ech703 hypothetical protein YP_002989508.1 4558431 D 579405 CDS YP_002989509.1 242241328 8087319 4559145..4560500 1 NC_012880.1 TIGRFAM: D-serine ammonia-lyase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: bvi:Bcep1808_3327 D-serine dehydratase; D-serine ammonia-lyase 4560500 8087319 Dd703_3934 Dickeya dadantii Ech703 D-serine ammonia-lyase YP_002989509.1 4559145 D 579405 CDS YP_002989510.1 242241329 8087320 4560503..4560979 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vvu:VV1_2510 acetyltransferase; N-acetyltransferase GCN5 4560979 8087320 Dd703_3935 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002989510.1 4560503 D 579405 CDS YP_002989511.1 242241330 8087321 complement(4561069..4562121) 1 NC_012880.1 KEGG: bte:BTH_I2306 hypothetical protein; hypothetical protein 4562121 8087321 Dd703_3936 Dickeya dadantii Ech703 hypothetical protein YP_002989511.1 4561069 R 579405 CDS YP_002989512.1 242241331 8087322 complement(4562145..4563116) 1 NC_012880.1 PFAM: sodium symporter; KEGG: dac:Daci_1101 bile acid:sodium symporter; sodium symporter 4563116 8087322 Dd703_3937 Dickeya dadantii Ech703 sodium symporter YP_002989512.1 4562145 R 579405 CDS YP_002989513.1 242241332 8087323 4563392..4564669 1 NC_012880.1 PFAM: histidine acid phosphatase; KEGG: eca:ECA4198 exported phosphatase; glucose-1-phosphatase 4564669 8087323 Dd703_3938 Dickeya dadantii Ech703 glucose-1-phosphatase YP_002989513.1 4563392 D 579405 CDS YP_002989514.1 242241333 8087324 complement(4564754..4565980) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3375 transporter; major facilitator superfamily protein 4565980 8087324 Dd703_3939 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002989514.1 4564754 R 579405 CDS YP_002989515.1 242241334 8087325 complement(4566060..4566947) 1 NC_012880.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3376 LysR family transcriptional regulator; LysR family transcriptional regulator 4566947 8087325 Dd703_3940 Dickeya dadantii Ech703 LysR family transcriptional regulator YP_002989515.1 4566060 R 579405 CDS YP_002989516.1 242241335 8087326 complement(4566960..4568111) 1 NC_012880.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_2238 transporter major facilitator family; major facilitator superfamily protein 4568111 8087326 Dd703_3941 Dickeya dadantii Ech703 major facilitator superfamily protein YP_002989516.1 4566960 R 579405 CDS YP_002989517.1 242241336 8087327 4568451..4569104 1 NC_012880.1 KEGG: asa:ASA_1096 hypothetical protein; hypothetical protein 4569104 8087327 Dd703_3942 Dickeya dadantii Ech703 hypothetical protein YP_002989517.1 4568451 D 579405 CDS YP_002989518.1 242241337 8087328 4569082..4570509 1 NC_012880.1 PFAM: AMP-dependent synthetase and ligase; KEGG: aha:AHA_3218 long-chain acyl-CoA synthetases; AMP-dependent synthetase and ligase 4570509 8087328 Dd703_3943 Dickeya dadantii Ech703 AMP-dependent synthetase and ligase YP_002989518.1 4569082 D 579405 CDS YP_002989519.1 242241338 8087329 4570513..4571163 1 NC_012880.1 KEGG: aha:AHA_3219 long-chain acyl-CoA synthetase; long-chain acyl-CoA synthetase 4571163 8087329 Dd703_3944 Dickeya dadantii Ech703 long-chain acyl-CoA synthetase YP_002989519.1 4570513 D 579405 CDS YP_002989520.1 242241339 8087330 4571166..4571960 1 NC_012880.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KEGG: asa:ASA_1093 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4571960 8087330 Dd703_3945 Dickeya dadantii Ech703 short-chain dehydrogenase/reductase SDR YP_002989520.1 4571166 D 579405 CDS YP_002989521.1 242241340 8087331 4571970..4572605 1 NC_012880.1 KEGG: aha:AHA_3221 hypotheticalprotein; hypothetical protein 4572605 8087331 Dd703_3946 Dickeya dadantii Ech703 hypothetical protein YP_002989521.1 4571970 D 579405 CDS YP_002989522.1 242241341 8087333 complement(4573219..4574946) 1 NC_012880.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB 4574946 ligB 8087333 ligB Dickeya dadantii Ech703 NAD-dependent DNA ligase LigB YP_002989522.1 4573219 R 579405 CDS YP_002989523.1 242241342 8087334 4575237..4575860 1 NC_012880.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 4575860 gmk 8087334 gmk Dickeya dadantii Ech703 guanylate kinase YP_002989523.1 4575237 D 579405 CDS YP_002989524.1 242241343 8087335 4575916..4576191 1 NC_012880.1 TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6; KEGG: see:SNSL254_A4021 DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 4576191 8087335 Dd703_3949 Dickeya dadantii Ech703 DNA-directed RNA polymerase subunit omega YP_002989524.1 4575916 D 579405 CDS YP_002989525.1 242241344 8087336 4576210..4578312 1 NC_012880.1 KEGG: eca:ECA0038 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 4578312 8087336 Dd703_3950 Dickeya dadantii Ech703 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_002989525.1 4576210 D 579405 CDS YP_002989526.1 242241345 8087337 4578319..4579011 1 NC_012880.1 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 4579011 8087337 Dd703_3951 Dickeya dadantii Ech703 tRNA guanosine-2'-O-methyltransferase YP_002989526.1 4578319 D 579405 CDS YP_002989527.1 242241346 8087338 4579011..4581092 1 NC_012880.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 4581092 8087338 Dd703_3952 Dickeya dadantii Ech703 ATP-dependent DNA helicase RecG YP_002989527.1 4579011 D 579405 CDS YP_002989528.1 242241347 8087339 4581420..4582808 1 NC_012880.1 TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: eta:ETA_00380 purine/xanthine transporter; uracil-xanthine permease 4582808 8087339 Dd703_3953 Dickeya dadantii Ech703 uracil-xanthine permease YP_002989528.1 4581420 D 579405 CDS YP_002989529.1 242241348 8087340 4582966..4584693 1 NC_012880.1 PFAM: AsmA family protein; KEGG: eca:ECA0034 hypothetical protein; AsmA family protein 4584693 8087340 Dd703_3954 Dickeya dadantii Ech703 AsmA family protein YP_002989529.1 4582966 D 579405 CDS YP_002989530.1 242241349 8087341 complement(4584800..4585741) 1 NC_012880.1 TIGRFAM: thioesterase domain protein; PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0033 GNAT family acetyltransferase; thioesterase domain-containing protein 4585741 8087341 Dd703_3955 Dickeya dadantii Ech703 thioesterase domain-containing protein YP_002989530.1 4584800 R 579405 CDS YP_002989531.1 242241350 8087342 complement(4585774..4586211) 1 NC_012880.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4586211 8087342 Dd703_3956 Dickeya dadantii Ech703 D-tyrosyl-tRNA(Tyr) deacylase YP_002989531.1 4585774 R 579405 CDS YP_002989532.1 242241351 8087343 complement(4586234..4586830) 1 NC_012880.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: eca:ECA0031 phosphatase; phosphatase 4586830 8087343 Dd703_3957 Dickeya dadantii Ech703 phosphatase YP_002989532.1 4586234 R 579405 CDS YP_002989533.1 242241352 8087344 complement(4587013..4588836) 1 NC_012880.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: eum:ECUMN_4395 GTP-binding protein; GTP-binding protein TypA 4588836 8087344 Dd703_3958 Dickeya dadantii Ech703 GTP-binding protein TypA YP_002989533.1 4587013 R 579405 CDS YP_002989534.1 242241353 8087345 4589218..4590627 1 NC_012880.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 4590627 glnA 8087345 glnA Dickeya dadantii Ech703 glutamine synthetase YP_002989534.1 4589218 D 579405 CDS YP_002989535.1 242241354 8087346 4590657..4590782 1 NC_012880.1 hypothetical protein 4590782 8087346 Dd703_3960 Dickeya dadantii Ech703 hypothetical protein YP_002989535.1 4590657 D 579405 CDS YP_002989536.1 242241355 8087347 4590831..4591880 1 NC_012880.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 4591880 glnL 8087347 glnL Dickeya dadantii Ech703 nitrogen regulation protein NR(II) YP_002989536.1 4590831 D 579405 CDS YP_002989537.1 242241356 8087348 4591889..4593301 1 NC_012880.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 4593301 glnG 8087348 glnG Dickeya dadantii Ech703 nitrogen regulation protein NR(I) YP_002989537.1 4591889 D 579405 CDS YP_002989538.1 242241357 8087349 4593449..4593571 1 NC_012880.1 KEGG: ecx:EcHS_A4094 hypothetical protein; hypothetical protein 4593571 8087349 Dd703_3963 Dickeya dadantii Ech703 hypothetical protein YP_002989538.1 4593449 D 579405 CDS YP_002989539.1 242241358 8087350 complement(4593649..4595022) 1 NC_012880.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4595022 8087350 Dd703_3964 Dickeya dadantii Ech703 coproporphyrinogen III oxidase YP_002989539.1 4593649 R 579405 CDS YP_002989540.1 242241359 8087351 complement(4595204..4595734) 1 NC_012880.1 PFAM: protein of unknown function DUF414; KEGG: eca:ECA0024 hypothetical protein; hypothetical protein 4595734 8087351 Dd703_3965 Dickeya dadantii Ech703 hypothetical protein YP_002989540.1 4595204 R 579405 CDS YP_002989541.1 242241360 8087352 4595926..4596588 1 NC_012880.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4596588 engB 8087352 engB Dickeya dadantii Ech703 ribosome biogenesis GTP-binding protein YsxC YP_002989541.1 4595926 D 579405 CDS YP_002989542.1 242241361 8087353 complement(4597087..4599882) 1 NC_012880.1 KEGG: eca:ECA0021 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; DNA polymerase I 4599882 8087353 Dd703_3967 Dickeya dadantii Ech703 DNA polymerase I YP_002989542.1 4597087 R 579405 CDS YP_002989543.1 242241362 8087354 complement(4600261..4600884) 1 NC_012880.1 PFAM: DSBA oxidoreductase; KEGG: eca:ECA0020 periplasmic protein disulfide isomerase I; protein disulfide isomerase I 4600884 8087354 Dd703_3968 Dickeya dadantii Ech703 protein disulfide isomerase I YP_002989543.1 4600261 R 579405 CDS YP_002989544.1 242241363 8087355 complement(4600906..4601892) 1 NC_012880.1 PFAM: aminoglycoside phosphotransferase; KEGG: yen:YE0019 serine/threonine protein kinase; aminoglycoside phosphotransferase 4601892 8087355 Dd703_3969 Dickeya dadantii Ech703 aminoglycoside phosphotransferase YP_002989544.1 4600906 R 579405 CDS YP_002989545.1 242241364 8087356 complement(4601949..4602218) 1 NC_012880.1 PFAM: protein of unknown function DUF1040; KEGG: eca:ECA0018 hypothetical protein; hypothetical protein 4602218 8087356 Dd703_3970 Dickeya dadantii Ech703 hypothetical protein YP_002989545.1 4601949 R 579405 CDS YP_002989546.1 242241365 8087357 4602329..4602907 1 NC_012880.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4602907 mobA 8087357 mobA Dickeya dadantii Ech703 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_002989546.1 4602329 D 579405 CDS YP_002989547.1 242241366 8087358 4602900..4603421 1 NC_012880.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: ecr:ECIAI1_4055 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 4603421 8087358 Dd703_3972 Dickeya dadantii Ech703 molybdopterin-guanine dinucleotide biosynthesis protein B YP_002989547.1 4602900 D 579405 CDS YP_002989548.1 242241367 8087363 complement(4609121..4610137) 1 NC_012880.1 DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR 4610137 8087363 Dd703_3973 Dickeya dadantii Ech703 transcriptional repressor RbsR YP_002989548.1 4609121 R 579405 CDS YP_002989549.1 242241368 8087364 complement(4610141..4611067) 1 NC_012880.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 4611067 8087364 Dd703_3974 Dickeya dadantii Ech703 ribokinase YP_002989549.1 4610141 R 579405 CDS YP_002989550.1 242241369 8087365 complement(4611136..4612026) 1 NC_012880.1 periplasmic substrate-binding component of the ATP-dependent ribose transporter; D-ribose transporter subunit RbsB 4612026 8087365 Dd703_3975 Dickeya dadantii Ech703 D-ribose transporter subunit RbsB YP_002989550.1 4611136 R 579405 CDS YP_002989551.1 242241370 8087366 complement(4612052..4613020) 1 NC_012880.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 4613020 rbsC 8087366 rbsC Dickeya dadantii Ech703 ribose ABC transporter permease YP_002989551.1 4612052 R 579405 CDS YP_002989552.1 242241371 8087367 complement(4613028..4614533) 1 NC_012880.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 4614533 8087367 Dd703_3977 Dickeya dadantii Ech703 D-ribose transporter ATP-binding protein YP_002989552.1 4613028 R 579405 CDS YP_002989553.1 242241372 8087368 complement(4614541..4614960) 1 NC_012880.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 4614960 8087368 Dd703_3978 Dickeya dadantii Ech703 D-ribose pyranase YP_002989553.1 4614541 R 579405 CDS YP_002989554.1 242241373 8087369 complement(4615368..4617236) 1 NC_012880.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transporter Kup 4617236 trkD 8087369 trkD Dickeya dadantii Ech703 potassium transporter Kup YP_002989554.1 4615368 R 579405 CDS YP_002989555.1 242241374 8087370 4617493..4618992 1 NC_012880.1 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA 4618992 8087370 Dd703_3980 Dickeya dadantii Ech703 regulatory ATPase RavA YP_002989555.1 4617493 D 579405 CDS YP_002989556.1 242241375 8087371 4618998..4620479 1 NC_012880.1 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 4620479 yieM 8087371 yieM Dickeya dadantii Ech703 hypothetical protein YP_002989556.1 4618998 D 579405 CDS YP_002989557.1 242241376 8087372 4620566..4621027 1 NC_012880.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 4621027 8087372 Dd703_3982 Dickeya dadantii Ech703 DNA-binding transcriptional regulator AsnC YP_002989557.1 4620566 D 579405 CDS YP_002989558.1 242241377 8087373 4621118..4621561 1 NC_012880.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: eca:ECA0001 flavodoxin; flavodoxin/nitric oxide synthase 4621561 8087373 Dd703_3983 Dickeya dadantii Ech703 flavodoxin/nitric oxide synthase YP_002989558.1 4621118 D 579405 CDS YP_002989559.1 242241378 8087374 4621940..4623829 1 NC_012880.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 4623829 8087374 Dd703_3984 Dickeya dadantii Ech703 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002989559.1 4621940 D 579405 CDS YP_002989560.1 242241379 8087375 4623902..4624522 1 NC_012880.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: eca:ECA4520 glucose-inhibited division protein B; methyltransferase GidB 4624522 8087375 Dd703_3985 Dickeya dadantii Ech703 methyltransferase GidB YP_002989560.1 4623902 D 579405 CDS YP_002989561.1 242241380 8087376 4625149..4625532 1 NC_012880.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 4625532 8087376 Dd703_3986 Dickeya dadantii Ech703 F0F1 ATP synthase subunit I YP_002989561.1 4625149 D 579405 CDS YP_002989562.1 242241381 8087377 4625555..4626337 1 NC_012880.1 TIGRFAM: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase subunit alpha; KEGG: sgl:SG2408 F0F1 ATP synthase subunit A; ATP synthase F0 subunit alpha 4626337 8087377 Dd703_3987 Dickeya dadantii Ech703 ATP synthase F0 subunit alpha YP_002989562.1 4625555 D 579405 CDS YP_002989563.1 242241382 8087378 4626386..4626625 1 NC_012880.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 4626625 8087378 Dd703_3988 Dickeya dadantii Ech703 F0F1 ATP synthase subunit C YP_002989563.1 4626386 D 579405 CDS YP_002989564.1 242241383 8087379 4626692..4627162 1 NC_012880.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 4627162 8087379 Dd703_3989 Dickeya dadantii Ech703 F0F1 ATP synthase subunit B YP_002989564.1 4626692 D 579405 CDS YP_002989565.1 242241384 8087380 4627177..4627710 1 NC_012880.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the subunit delta is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 4627710 8087380 Dd703_3990 Dickeya dadantii Ech703 F0F1 ATP synthase subunit delta YP_002989565.1 4627177 D 579405 CDS YP_002989566.1 242241385 8087381 4627723..4629264 1 NC_012880.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4629264 8087381 Dd703_3991 Dickeya dadantii Ech703 F0F1 ATP synthase subunit alpha YP_002989566.1 4627723 D 579405 CDS YP_002989567.1 242241386 8087382 4629318..4630181 1 NC_012880.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4630181 8087382 Dd703_3992 Dickeya dadantii Ech703 F0F1 ATP synthase subunit gamma YP_002989567.1 4629318 D 579405 CDS YP_002989568.1 242241387 8087383 4630230..4631612 1 NC_012880.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 4631612 8087383 Dd703_3993 Dickeya dadantii Ech703 F0F1 ATP synthase subunit beta YP_002989568.1 4630230 D 579405 CDS YP_002989569.1 242241388 8087384 4631633..4632055 1 NC_012880.1 TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: H+transporting two-sector ATPase delta/subunit epsilon; KEGG: eca:ECA4511 F0F1 ATP synthase subunit epsilon; ATP synthase F1 subunit epsilon 4632055 8087384 Dd703_3994 Dickeya dadantii Ech703 ATP synthase F1 subunit epsilon YP_002989569.1 4631633 D 579405 CDS YP_002989570.1 242241389 8087386 complement(4632523..4634727) 1 NC_012880.1 KEGG: eca:ECA4510 exopolygalacturonate lyase; exopolygalacturonate lyase 4634727 8087386 Dd703_3996 Dickeya dadantii Ech703 exopolygalacturonate lyase YP_002989570.1 4632523 R 579405 CDS YP_002989571.1 242241390 8087387 4635175..4636545 1 NC_012880.1 KEGG: ypg:YpAngola_A4200 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: nucleotidyl transferase; transferase; UDP-N-acetylglucosamine pyrophosphorylase 4636545 8087387 Dd703_3997 Dickeya dadantii Ech703 UDP-N-acetylglucosamine pyrophosphorylase YP_002989571.1 4635175 D 579405 CDS YP_002989572.1 242241391 8087388 4636800..4638635 1 NC_012880.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 4638635 8087388 Dd703_3998 Dickeya dadantii Ech703 glucosamine--fructose-6-phosphate aminotransferase YP_002989572.1 4636800 D 579405 CDS YP_002989573.1 242241392 8087389 4639063..4640103 1 NC_012880.1 TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA4477 phosphate transporter subunit; phosphate ABC transporter substrate-binding protein 4640103 8087389 Dd703_3999 Dickeya dadantii Ech703 phosphate ABC transporter substrate-binding protein YP_002989573.1 4639063 D 579405 CDS YP_002989574.1 242241393 8087390 4640220..4641179 1 NC_012880.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 4641179 pstC 8087390 pstC Dickeya dadantii Ech703 phosphate transporter permease subunit PstC YP_002989574.1 4640220 D 579405 CDS YP_002989575.1 242241394 8087391 4641176..4642066 1 NC_012880.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 4642066 pstA 8087391 pstA Dickeya dadantii Ech703 phosphate transporter permease subunit PtsA YP_002989575.1 4641176 D 579405 CDS YP_002989576.1 242241395 8087392 4642119..4642895 1 NC_012880.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 4642895 pstB 8087392 pstB Dickeya dadantii Ech703 phosphate transporter ATP-binding protein YP_002989576.1 4642119 D 579405 CDS YP_002989577.1 242241396 8087393 4642909..4643643 1 NC_012880.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 4643643 8087393 Dd703_4003 Dickeya dadantii Ech703 transcriptional regulator PhoU YP_002989577.1 4642909 D 579405 CDS YP_002989578.1 242241397 8087394 4643947..4644783 1 NC_012880.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4470 extracellular solute-binding protein; family 3 extracellular solute-binding protein 4644783 8087394 Dd703_4004 Dickeya dadantii Ech703 family 3 extracellular solute-binding protein YP_002989578.1 4643947 D 579405 CDS YP_002989579.1 242241398 8087395 4645069..4645809 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_0018 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease 4645809 8087395 Dd703_4005 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002989579.1 4645069 D 579405 CDS YP_002989580.1 242241399 8087396 4645811..4646545 1 NC_012880.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_0019 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease 4646545 8087396 Dd703_4006 Dickeya dadantii Ech703 polar amino acid ABC transporter permease YP_002989580.1 4645811 D 579405 CDS YP_002989581.1 242241400 8087397 complement(4646555..4647223) 1 NC_012880.1 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase 4647223 8087397 Dd703_4007 Dickeya dadantii Ech703 6-phosphogluconate phosphatase YP_002989581.1 4646555 R 579405 CDS YP_002989582.1 242241401 8087398 4647453..4648790 1 NC_012880.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: eca:ECA4464 permease; xanthine/uracil/vitamin C permease 4648790 8087398 Dd703_4008 Dickeya dadantii Ech703 xanthine/uracil/vitamin C permease YP_002989582.1 4647453 D 579405 CDS YP_002989583.1 242241402 8087399 complement(4648859..4649599) 1 NC_012880.1 KEGG: eca:ECA4463 hypothetical protein; hypothetical protein 4649599 8087399 Dd703_4009 Dickeya dadantii Ech703 hypothetical protein YP_002989583.1 4648859 R 579405 CDS YP_002989584.1 242241403 8087400 complement(4650166..4650696) 1 NC_012880.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA4462 electron transporter; 4Fe-4S ferredoxin 4650696 8087400 Dd703_4010 Dickeya dadantii Ech703 4Fe-4S ferredoxin YP_002989584.1 4650166 R 579405 CDS YP_002989585.1 242241404 8087401 complement(4650693..4652708) 1 NC_012880.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); oxidoreductase Fe-S binding subunit 4652708 8087401 Dd703_4011 Dickeya dadantii Ech703 oxidoreductase Fe-S binding subunit YP_002989585.1 4650693 R 579405 CDS YP_002989586.1 242241405 8087402 4653522..4654193 1 NC_012880.1 PFAM: Curli production assembly/transport component CsgG; KEGG: eca:ECA4460 lipoprotein; curli production assembly/transport component CsgG 4654193 8087402 Dd703_4012 Dickeya dadantii Ech703 curli production assembly/transport component CsgG YP_002989586.1 4653522 D 579405 CDS YP_002989587.1 242241406 8087403 4654212..4654565 1 NC_012880.1 KEGG: eca:ECA4459 lipoprotein; lipoprotein 4654565 8087403 Dd703_4013 Dickeya dadantii Ech703 lipoprotein YP_002989587.1 4654212 D 579405 CDS YP_002989588.1 242241407 8087404 4654569..4655228 1 NC_012880.1 PFAM: protein of unknown function DUF799; KEGG: eca:ECA4458 lipoprotein; hypothetical protein 4655228 8087404 Dd703_4014 Dickeya dadantii Ech703 hypothetical protein YP_002989588.1 4654569 D 579405 CDS YP_002989589.1 242241408 8087405 4655972..4657111 1 NC_012880.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 4657111 8087405 Dd703_4015 Dickeya dadantii Ech703 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_002989589.1 4655972 D 579405 CDS YP_002989590.1 242241409 8087406 4657115..4658095 1 NC_012880.1 PFAM: glycosyl transferase family 2; KEGG: ent:Ent638_2078 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; family 2 glycosyl transferase 4658095 8087406 Dd703_4016 Dickeya dadantii Ech703 family 2 glycosyl transferase YP_002989590.1 4657115 D 579405 CDS YP_002989591.1 242241410 8087407 4658092..4660074 1 NC_012880.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 4660074 8087407 Dd703_4017 Dickeya dadantii Ech703 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_002989591.1 4658092 D 579405 CDS YP_002989592.1 242241411 8087408 4660071..4660970 1 NC_012880.1 PFAM: polysaccharide deacetylase; KEGG: ent:Ent638_2076 polysaccharide deacetylase; polysaccharide deacetylase 4660970 8087408 Dd703_4018 Dickeya dadantii Ech703 polysaccharide deacetylase YP_002989592.1 4660071 D 579405 CDS YP_002989593.1 242241412 8087409 4660970..4662622 1 NC_012880.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 4662622 arnT 8087409 arnT Dickeya dadantii Ech703 4-amino-4-deoxy-L-arabinose transferase YP_002989593.1 4660970 D 579405 CDS YP_002989594.1 242241413 8087410 4662619..4662960 1 NC_012880.1 KEGG: eta:ETA_23780 inner membrane protein; inner membrane protein 4662960 8087410 Dd703_4020 Dickeya dadantii Ech703 inner membrane protein YP_002989594.1 4662619 D 579405 CDS YP_002989595.1 242241414 8087411 4662957..4663355 1 NC_012880.1 KEGG: yen:YE2186 hypothetical protein; hypothetical protein 4663355 8087411 Dd703_4021 Dickeya dadantii Ech703 hypothetical protein YP_002989595.1 4662957 D 579405 CDS YP_002989596.1 242241415 8087412 4663453..4663932 1 NC_012880.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_17400 GNAT-family acetyltransferase; N-acetyltransferase GCN5 4663932 8087412 Dd703_4022 Dickeya dadantii Ech703 N-acetyltransferase GCN5 YP_002989596.1 4663453 D 579405 CDS YP_002989597.1 242241416 8087413 complement(4664043..4665131) 1 NC_012880.1 KEGG: prw:PsycPRwf_1040 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 4665131 8087413 Dd703_4023 Dickeya dadantii Ech703 4-hydroxyphenylpyruvate dioxygenase YP_002989597.1 4664043 R 579405 CDS YP_002989598.1 242241417 8087414 complement(4665401..4666456) 1 NC_012880.1 TIGRFAM: methyltransferase FkbM family; KEGG: noc:Noc_0747 methyltransferase FkbM; FkbM family methyltransferase 4666456 8087414 Dd703_4024 Dickeya dadantii Ech703 FkbM family methyltransferase YP_002989598.1 4665401 R 579405 CDS YP_002989599.1 242241418 8087415 complement(4666751..4668007) 1 NC_012880.1 PFAM: secretion protein HlyD; KEGG: plu:plu2645 hypothetical protein; secretion protein HlyD 4668007 8087415 Dd703_4025 Dickeya dadantii Ech703 secretion protein HlyD YP_002989599.1 4666751 R 579405 CDS YP_002989600.1 242241419 8087416 complement(4668000..4669460) 1 NC_012880.1 PFAM: outer membrane efflux protein; KEGG: plu:plu2646 hypothetical protein; outer membrane efflux protein 4669460 8087416 Dd703_4026 Dickeya dadantii Ech703 outer membrane efflux protein YP_002989600.1 4668000 R 579405 CDS YP_002989601.1 242241420 8087417 complement(4669453..4670667) 1 NC_012880.1 PFAM: protein of unknown function DUF214; KEGG: plu:plu2647 hypothetical protein; hypothetical protein 4670667 8087417 Dd703_4027 Dickeya dadantii Ech703 hypothetical protein YP_002989601.1 4669453 R 579405 CDS YP_002989602.1 242241421 8087418 complement(4670660..4671346) 1 NC_012880.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ppw:PputW619_0892 ABC transporter; ABC transporter 4671346 8087418 Dd703_4028 Dickeya dadantii Ech703 ABC transporter YP_002989602.1 4670660 R 579405 CDS YP_002989603.1 242241422 8087419 complement(4671438..4672256) 1 NC_012880.1 KEGG: ent:Ent638_0389 hypothetical protein; hypothetical protein 4672256 8087419 Dd703_4029 Dickeya dadantii Ech703 hypothetical protein YP_002989603.1 4671438 R 579405 CDS YP_002989604.1 242241423 8087420 complement(4672378..4672845) 1 NC_012880.1 KEGG: plu:plu2640 hypothetical protein; hypothetical protein 4672845 8087420 Dd703_4030 Dickeya dadantii Ech703 hypothetical protein YP_002989604.1 4672378 R 579405 CDS YP_002989605.1 242241424 8087421 complement(4673715..4674383) 1 NC_012880.1 TIGRFAM: HipA N-terminal domain protein; KEGG: plu:plu4900 HipA protein; HipA N-terminal domain-containing protein 4674383 8087421 Dd703_4031 Dickeya dadantii Ech703 HipA N-terminal domain-containing protein YP_002989605.1 4673715 R 579405 CDS YP_002989606.1 242241425 8087422 complement(4674383..4674634) 1 NC_012880.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: plu:plu4901 HipB protein; helix-turn-helix domain-containing protein 4674634 8087422 Dd703_4032 Dickeya dadantii Ech703 helix-turn-helix domain-containing protein YP_002989606.1 4674383 R 579405 CDS YP_002989607.1 242241426 8086527 complement(4675176..4676537) 1 NC_012880.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4676537 trmE 8086527 trmE Dickeya dadantii Ech703 tRNA modification GTPase TrmE YP_002989607.1 4675176 R 579405 CDS YP_002989608.1 242241427 8086528 complement(4676620..4678251) 1 NC_012880.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 4678251 8086528 Dd703_4035 Dickeya dadantii Ech703 inner membrane protein translocase component YidC YP_002989608.1 4676620 R 579405 CDS YP_002989609.1 242241428 8086529 complement(4678254..4678511) 1 NC_012880.1 PFAM: protein of unknown function DUF37; KEGG: sgl:SG2430 hypothetical protein; hypothetical protein 4678511 8086529 Dd703_4036 Dickeya dadantii Ech703 hypothetical protein YP_002989609.1 4678254 R 579405 CDS YP_002989610.1 242241429 8086530 complement(4678475..4678834) 1 NC_012880.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 4678834 rnpA 8086530 rnpA Dickeya dadantii Ech703 ribonuclease P YP_002989610.1 4678475 R 579405 CDS YP_002989611.1 242241430 8086531 complement(4678853..4678993) 1 NC_012880.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4678993 rpmH 8086531 rpmH Dickeya dadantii Ech703 50S ribosomal protein L34 YP_002989611.1 4678853 R 579405 CDS