-- dump date 20140619_065223 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 246195000001 SEQ_END SEQ_END NC_009446.1 1389350 1389350 DR NC_009446.1; contig end 1389350..1389350 Dichelobacter nodosus VCS1703A YP_001208941.1 CDS dnaA NC_009446.1 130 1458 D identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein 130..1458 Dichelobacter nodosus VCS1703A 5122489 YP_001208942.1 CDS dnaN NC_009446.1 1668 2912 D identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 1668..2912 Dichelobacter nodosus VCS1703A 5122555 YP_001208943.1 CDS DNO_0003 NC_009446.1 2978 4837 D identified by match to protein family HMM PF01553; match to protein family HMM PF07690; acyltransferase domain-containing protein 2978..4837 Dichelobacter nodosus VCS1703A 5122868 YP_001208944.1 CDS DNO_0005 NC_009446.1 4830 5624 D identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 4830..5624 Dichelobacter nodosus VCS1703A 5122837 YP_001208945.1 CDS yccS NC_009446.1 5534 7708 R identified by match to protein family HMM PF05976; match to protein family HMM TIGR01666; match to protein family HMM TIGR01667; membrane protein complement(5534..7708) Dichelobacter nodosus VCS1703A 5123242 YP_001208946.1 CDS DNO_0006 NC_009446.1 7738 7893 D hypothetical protein 7738..7893 Dichelobacter nodosus VCS1703A 5122823 YP_001208947.1 CDS DNO_0007 NC_009446.1 8034 9416 D identified by match to protein family HMM PF00560; leucine rich repeat domain-containing protein 8034..9416 Dichelobacter nodosus VCS1703A 5123257 YP_001208948.1 CDS DNO_0009 NC_009446.1 9542 11227 R identified by match to protein family HMM PF02080; match to protein family HMM PF06826; match to protein family HMM TIGR01625; hypothetical protein complement(9542..11227) Dichelobacter nodosus VCS1703A 5123387 YP_001208949.1 CDS DNO_0010 NC_009446.1 11257 11421 R hypothetical protein complement(11257..11421) Dichelobacter nodosus VCS1703A 5122230 YP_001208950.1 CDS uspA NC_009446.1 11520 11966 D identified by match to protein family HMM PF00582; universal stress family protein 11520..11966 Dichelobacter nodosus VCS1703A 5122580 YP_001208951.1 CDS DNO_0012 NC_009446.1 12181 13170 D identified by match to protein family HMM PF00254; match to protein family HMM PF01346; FKBP-type peptidyl-prolyl cis-trans isomerase 12181..13170 Dichelobacter nodosus VCS1703A 5122875 YP_001208952.1 CDS DNO_0013 NC_009446.1 13287 14720 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase complement(13287..14720) Dichelobacter nodosus VCS1703A 5122809 YP_001208953.1 CDS DNO_0014 NC_009446.1 15025 17202 D identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711; ornithine decarboxylase 15025..17202 Dichelobacter nodosus VCS1703A 5122852 YP_001208954.1 CDS potE NC_009446.1 17276 18595 D catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter 17276..18595 Dichelobacter nodosus VCS1703A 5122216 YP_001208955.1 CDS DNO_0018 NC_009446.1 19061 20089 D identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase 19061..20089 Dichelobacter nodosus VCS1703A 5122866 YP_001208956.1 CDS relA NC_009446.1 20084 22228 R identified by match to protein family HMM PF01842; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase complement(20084..22228) Dichelobacter nodosus VCS1703A 5122893 YP_001208957.1 CDS pepN NC_009446.1 22225 24870 R identified by match to protein family HMM PF01433; match to protein family HMM TIGR02414; aminopeptidase N complement(22225..24870) Dichelobacter nodosus VCS1703A 5123409 YP_001208958.1 CDS maeB NC_009446.1 24911 27178 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(24911..27178) Dichelobacter nodosus VCS1703A 5122197 YP_001208959.1 CDS DNO_0021 NC_009446.1 27263 28267 D identified by match to protein family HMM PF00933; beta-hexosaminidase 27263..28267 Dichelobacter nodosus VCS1703A 5123177 YP_001208960.1 CDS DNO_0022 NC_009446.1 28257 28667 D hypothetical protein 28257..28667 Dichelobacter nodosus VCS1703A 5122208 YP_001208961.1 CDS DNO_0023 NC_009446.1 28670 29233 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 28670..29233 Dichelobacter nodosus VCS1703A 5122634 YP_001208962.1 CDS DNO_0024 NC_009446.1 29205 29564 D lipoprotein 29205..29564 Dichelobacter nodosus VCS1703A 5122726 YP_001208963.1 CDS DNO_0025 NC_009446.1 29747 31198 D identified by match to protein family HMM PF04575; hypothetical protein 29747..31198 Dichelobacter nodosus VCS1703A 5122532 YP_001208964.1 CDS queA NC_009446.1 31252 32316 R identified by match to protein family HMM PF02547; match to protein family HMM TIGR00113; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(31252..32316) Dichelobacter nodosus VCS1703A 5123329 YP_001208965.1 CDS truB NC_009446.1 32316 33209 R identified by match to protein family HMM PF01509; match to protein family HMM PF09157; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B complement(32316..33209) Dichelobacter nodosus VCS1703A 5122514 YP_001208966.1 CDS rbfA NC_009446.1 33212 33580 R identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A complement(33212..33580) Dichelobacter nodosus VCS1703A 5123163 YP_001208967.1 CDS infB NC_009446.1 33580 36219 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 complement(33580..36219) Dichelobacter nodosus VCS1703A 5123408 YP_001208968.1 CDS nusA NC_009446.1 36240 37727 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF08529; match to protein family HMM TIGR01953; match to protein family HMM TIGR01954; transcription termination factor complement(36240..37727) Dichelobacter nodosus VCS1703A 5122139 YP_001208969.1 CDS DNO_0031 NC_009446.1 37746 38213 R identified by match to protein family HMM PF02576; hypothetical protein complement(37746..38213) Dichelobacter nodosus VCS1703A 5123355 YP_001208970.1 CDS DNO_0033 NC_009446.1 38976 39716 D identified by match to protein family HMM PF00497; extracellular solute-binding family protein 38976..39716 Dichelobacter nodosus VCS1703A 5122892 YP_001208971.1 CDS DNO_0034 NC_009446.1 39902 40630 D identified by match to protein family HMM PF00497; extracellular solute-binding family protein 39902..40630 Dichelobacter nodosus VCS1703A 5122656 YP_001208972.1 CDS DNO_0035 NC_009446.1 40879 41550 D identified by match to protein family HMM PF02698; hypothetical protein 40879..41550 Dichelobacter nodosus VCS1703A 5122476 YP_001208973.1 CDS DNO_0036 NC_009446.1 41638 42453 D identified by match to protein family HMM PF00877; NlpC/P60 domain-containing protein 41638..42453 Dichelobacter nodosus VCS1703A 5122916 YP_001208974.1 CDS DNO_0037 NC_009446.1 42519 43373 R hypothetical protein complement(42519..43373) Dichelobacter nodosus VCS1703A 5122607 YP_001208975.1 CDS secF NC_009446.1 43538 44458 R identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966; preprotein translocase, SecF subunit complement(43538..44458) Dichelobacter nodosus VCS1703A 5122383 YP_001208976.1 CDS secD NC_009446.1 44469 46334 R identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129; preprotein translocase, SecD subunit complement(44469..46334) Dichelobacter nodosus VCS1703A 5122873 YP_001208977.1 CDS DNO_0040 NC_009446.1 46402 46806 R identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC complement(46402..46806) Dichelobacter nodosus VCS1703A 5122377 YP_001208978.1 CDS xerC NC_009446.1 46987 47895 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific recombinase XerC complement(46987..47895) Dichelobacter nodosus VCS1703A 5122186 YP_001208979.1 CDS dapF NC_009446.1 47892 48728 R identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652; diaminopimelate epimerase complement(47892..48728) Dichelobacter nodosus VCS1703A 5122251 YP_001208980.1 CDS DNO_0043 NC_009446.1 48736 49614 R hypothetical protein complement(48736..49614) Dichelobacter nodosus VCS1703A 5122718 YP_001208981.1 CDS DNO_0044 NC_009446.1 49667 49807 D hypothetical protein 49667..49807 Dichelobacter nodosus VCS1703A 5122591 YP_001208982.1 CDS DNO_0045 NC_009446.1 49807 50418 D identified by match to protein family HMM PF01205; hypothetical protein 49807..50418 Dichelobacter nodosus VCS1703A 5123438 YP_001208983.1 CDS DNO_0046 NC_009446.1 50444 51277 D identified by match to protein family HMM PF00005; ABC transporter family protein 50444..51277 Dichelobacter nodosus VCS1703A 5122719 YP_001208984.1 CDS DNO_0047 NC_009446.1 51261 52004 D hypothetical protein 51261..52004 Dichelobacter nodosus VCS1703A 5122951 YP_001208985.1 CDS DNO_0048 NC_009446.1 51998 52999 D SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 51998..52999 Dichelobacter nodosus VCS1703A 5122160 YP_001208986.1 CDS DNO_0049 NC_009446.1 53027 54466 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase 53027..54466 Dichelobacter nodosus VCS1703A 5123380 YP_001208987.1 CDS DNO_0050 NC_009446.1 54566 55519 R hypothetical protein complement(54566..55519) Dichelobacter nodosus VCS1703A 5123215 YP_001208988.1 CDS DNO_0051 NC_009446.1 55529 56176 R identified by match to protein family HMM PF03458; hypothetical protein complement(55529..56176) Dichelobacter nodosus VCS1703A 5123243 YP_001208989.1 CDS DNO_0052 NC_009446.1 56237 56977 R hypothetical protein complement(56237..56977) Dichelobacter nodosus VCS1703A 5123137 YP_001208990.1 CDS DNO_0053 NC_009446.1 57206 59764 D identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 57206..59764 Dichelobacter nodosus VCS1703A 5123439 YP_001208991.1 CDS DNO_0057 NC_009446.1 60224 60388 R hypothetical protein complement(60224..60388) Dichelobacter nodosus VCS1703A 5122252 YP_001208992.1 CDS rpmB NC_009446.1 60962 61198 D identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; 50S ribosomal protein L28 60962..61198 Dichelobacter nodosus VCS1703A 5123303 YP_001208993.1 CDS rpmG NC_009446.1 61210 61380 D identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; 50S ribosomal protein L33 61210..61380 Dichelobacter nodosus VCS1703A 5122857 YP_001208994.1 CDS DNO_0062 NC_009446.1 61430 62644 R identified by match to protein family HMM PF07690; hypothetical protein complement(61430..62644) Dichelobacter nodosus VCS1703A 5122250 YP_001208995.1 CDS pth NC_009446.1 62648 63217 R identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; peptidyl-tRNA hydrolase complement(62648..63217) Dichelobacter nodosus VCS1703A 5122736 YP_001208996.1 CDS rplY NC_009446.1 63223 63900 R identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731; 50S ribosomal protein L25 complement(63223..63900) Dichelobacter nodosus VCS1703A 5122602 YP_001208997.1 CDS prsA NC_009446.1 63977 64915 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase complement(63977..64915) Dichelobacter nodosus VCS1703A 5122414 YP_001208998.1 CDS DNO_0067 NC_009446.1 65162 65749 R identified by match to protein family HMM PF03550; lipoprotein complement(65162..65749) Dichelobacter nodosus VCS1703A 5123313 YP_001208999.1 CDS DNO_0068 NC_009446.1 65736 67439 R identified by match to protein family HMM PF07719; hypothetical protein complement(65736..67439) Dichelobacter nodosus VCS1703A 5123234 YP_001209000.1 CDS hemA NC_009446.1 67528 68784 D identified by match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035; glutamyl-tRNA reductase 67528..68784 Dichelobacter nodosus VCS1703A 5122941 YP_001209001.1 CDS DNO_0070 NC_009446.1 68801 68944 D hypothetical protein 68801..68944 Dichelobacter nodosus VCS1703A 5123402 YP_001209002.1 CDS prfA NC_009446.1 68941 70038 D identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 68941..70038 Dichelobacter nodosus VCS1703A 5123143 YP_001209003.1 CDS DNO_0072 NC_009446.1 70035 70865 D identified by match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR00536; match to protein family HMM TIGR03387; HemK family modification methylase 70035..70865 Dichelobacter nodosus VCS1703A 5122479 YP_001209004.1 CDS DNO_0073 NC_009446.1 70873 71850 R identified by match to protein family HMM PF01244; dipeptidase family protein complement(70873..71850) Dichelobacter nodosus VCS1703A 5122641 YP_001209005.1 CDS DNO_0074 NC_009446.1 71992 72786 D enoyl-(acyl carrier protein) reductase 71992..72786 Dichelobacter nodosus VCS1703A 5123288 YP_001209006.1 CDS DNO_0075 NC_009446.1 72832 73629 R identified by match to protein family HMM PF01925; hypothetical protein complement(72832..73629) Dichelobacter nodosus VCS1703A 5122483 YP_001209007.1 CDS uvrA NC_009446.1 73660 76473 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A complement(73660..76473) Dichelobacter nodosus VCS1703A 5123106 YP_001209008.1 CDS purE NC_009446.1 76480 77010 R identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(76480..77010) Dichelobacter nodosus VCS1703A 5123446 YP_001209009.1 CDS purK NC_009446.1 77014 78141 R identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(77014..78141) Dichelobacter nodosus VCS1703A 5122370 YP_001209010.1 CDS DNO_0080 NC_009446.1 78273 78614 D identified by match to protein family HMM PF04287; hypothetical protein 78273..78614 Dichelobacter nodosus VCS1703A 5122818 YP_001209011.1 CDS DNO_0079 NC_009446.1 78611 79489 R identified by match to protein family HMM PF00892; hypothetical protein complement(78611..79489) Dichelobacter nodosus VCS1703A 5123431 YP_001209012.1 CDS DNO_0081 NC_009446.1 79671 80348 D identified by match to protein family HMM PF00691; match to protein family HMM PF05433; OmpA family protein 79671..80348 Dichelobacter nodosus VCS1703A 5123054 YP_001209013.1 CDS ribF NC_009446.1 80485 81444 D identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin kinase RibF 80485..81444 Dichelobacter nodosus VCS1703A 5122501 YP_001209014.1 CDS ileS NC_009446.1 81455 84229 D identified by match to protein family HMM PF00133; match to protein family HMM PF06827; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucyl-tRNA synthetase 81455..84229 Dichelobacter nodosus VCS1703A 5123129 YP_001209015.1 CDS lspA NC_009446.1 84229 84693 D identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077; signal peptidase II 84229..84693 Dichelobacter nodosus VCS1703A 5122540 YP_001209016.1 CDS DNO_0085 NC_009446.1 84994 85218 R hypothetical protein complement(84994..85218) Dichelobacter nodosus VCS1703A 5122302 YP_001209017.1 CDS DNO_0086 NC_009446.1 85225 85836 R identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase complement(85225..85836) Dichelobacter nodosus VCS1703A 5123332 YP_001209018.1 CDS hemN-1 NC_009446.1 86117 87493 D identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; oxygen-independent coproporphyrinogen III oxidase 86117..87493 Dichelobacter nodosus VCS1703A 5122295 YP_001209019.1 CDS purF NC_009446.1 87536 89053 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 87536..89053 Dichelobacter nodosus VCS1703A 5122757 YP_001209020.1 CDS DNO_0089 NC_009446.1 89046 89753 D identified by match to protein family HMM PF04445; hypothetical protein 89046..89753 Dichelobacter nodosus VCS1703A 5123130 YP_001209021.1 CDS DNO_0090 NC_009446.1 89764 90435 D identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine pyrophosphokinase family protein 89764..90435 Dichelobacter nodosus VCS1703A 5122320 YP_001209022.1 CDS DNO_0091 NC_009446.1 90518 91072 D identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 90518..91072 Dichelobacter nodosus VCS1703A 5123287 YP_001209023.1 CDS gap NC_009446.1 91192 92196 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase 91192..92196 Dichelobacter nodosus VCS1703A 5122182 YP_001209024.1 CDS DNO_0094 NC_009446.1 95444 97183 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter family protein complement(95444..97183) Dichelobacter nodosus VCS1703A 5122999 YP_001209025.1 CDS rfaE NC_009446.1 97230 98666 D identified by match to protein family HMM PF00294; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02198; match to protein family HMM TIGR02199; ADP-heptose synthase 97230..98666 Dichelobacter nodosus VCS1703A 5122575 YP_001209026.1 CDS DNO_0096 NC_009446.1 98698 99840 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase superfamily protein 98698..99840 Dichelobacter nodosus VCS1703A 5122957 YP_001209027.1 CDS DNO_0097 NC_009446.1 99841 101034 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(99841..101034) Dichelobacter nodosus VCS1703A 5122312 YP_001209028.1 CDS DNO_0098 NC_009446.1 101172 101309 R hypothetical protein complement(101172..101309) Dichelobacter nodosus VCS1703A 5123099 YP_001209029.1 CDS cydB NC_009446.1 101322 102473 R identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome bd ubiquinol oxidase subunit II complement(101322..102473) Dichelobacter nodosus VCS1703A 5122240 YP_001209030.1 CDS cydA NC_009446.1 102476 104029 R identified by match to protein family HMM PF01654; cytochrome bd ubiquinol oxidase, subunit I complement(102476..104029) Dichelobacter nodosus VCS1703A 5122678 YP_001209031.1 CDS cydC NC_009446.1 104060 105691 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868; ABC-type transporter involved in cytochrome bd biosynthesis complement(104060..105691) Dichelobacter nodosus VCS1703A 5122714 YP_001209032.1 CDS cydD NC_009446.1 105666 107354 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857; ABC-type transporter involved in cytochrome bd biosynthesis complement(105666..107354) Dichelobacter nodosus VCS1703A 5123088 YP_001209033.1 CDS DNO_0103 NC_009446.1 107357 107653 R hypothetical protein complement(107357..107653) Dichelobacter nodosus VCS1703A 5122885 YP_001209034.1 CDS DNO_0104 NC_009446.1 107739 109289 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; sulfate transporter family protein complement(107739..109289) Dichelobacter nodosus VCS1703A 5123221 YP_001209035.1 CDS DNO_0105 NC_009446.1 109557 110990 R identified by match to protein family HMM PF00245; alkaline phosphatase complement(109557..110990) Dichelobacter nodosus VCS1703A 5122399 YP_001209036.1 CDS DNO_0106 NC_009446.1 111182 112483 R identified by match to protein family HMM PF06354; hypothetical protein complement(111182..112483) Dichelobacter nodosus VCS1703A 5123249 YP_001209037.1 CDS DNO_0107 NC_009446.1 112497 113771 R hypothetical protein complement(112497..113771) Dichelobacter nodosus VCS1703A 5122504 YP_001209038.1 CDS clpB NC_009446.1 114084 116657 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; ATP-dependent protease ClpB 114084..116657 Dichelobacter nodosus VCS1703A 5123216 YP_001209039.1 CDS fimB NC_009446.1 116736 117509 R fimbrial protein FimB complement(116736..117509) Dichelobacter nodosus VCS1703A 5123119 YP_001209040.1 CDS fimA NC_009446.1 117650 118138 R identified by match to protein family HMM PF00114; match to protein family HMM PF07963; match to protein family HMM TIGR02532; fimbrial subunit FimA complement(117650..118138) Dichelobacter nodosus VCS1703A 5122473 YP_001209041.1 CDS aroA NC_009446.1 118352 119680 D identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 118352..119680 Dichelobacter nodosus VCS1703A 5122762 YP_001209042.1 CDS cmk NC_009446.1 119658 120332 D identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase 119658..120332 Dichelobacter nodosus VCS1703A 5123448 YP_001209043.1 CDS rpsA NC_009446.1 120353 122029 D identified by match to protein family HMM PF00575; match to protein family HMM TIGR00717; 30S ribosomal protein S1 120353..122029 Dichelobacter nodosus VCS1703A 5123160 YP_001209044.1 CDS ihfB NC_009446.1 122092 122382 D identified by match to protein family HMM PF00216; match to protein family HMM TIGR00988; integration host factor subunit beta 122092..122382 Dichelobacter nodosus VCS1703A 5122974 YP_001209045.1 CDS DNO_0115 NC_009446.1 122461 123057 D identified by match to protein family HMM PF00565; nuclease family protein 122461..123057 Dichelobacter nodosus VCS1703A 5123473 YP_001209046.1 CDS pcnB NC_009446.1 123145 124437 D identified by match to protein family HMM PF01743; match to protein family HMM TIGR01942; poly(A) polymerase PcnB 123145..124437 Dichelobacter nodosus VCS1703A 5122739 YP_001209047.1 CDS DNO_0117 NC_009446.1 124434 124928 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 124434..124928 Dichelobacter nodosus VCS1703A 5122863 YP_001209048.1 CDS ptsI NC_009446.1 124935 126671 R identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase complement(124935..126671) Dichelobacter nodosus VCS1703A 5122698 YP_001209049.1 CDS DNO_0119 NC_009446.1 126671 126931 R identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; PTS phosphocarrier protein HPr complement(126671..126931) Dichelobacter nodosus VCS1703A 5122342 YP_001209050.1 CDS DNO_0120 NC_009446.1 127079 127861 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 127079..127861 Dichelobacter nodosus VCS1703A 5122767 YP_001209051.1 CDS DNO_0121 NC_009446.1 127815 128240 D hypothetical protein 127815..128240 Dichelobacter nodosus VCS1703A 5122350 YP_001209052.1 CDS DNO_0122 NC_009446.1 128249 128410 R hypothetical protein complement(128249..128410) Dichelobacter nodosus VCS1703A 5123131 YP_001209053.1 CDS DNO_0123 NC_009446.1 128596 129090 R solute binding family protein complement(128596..129090) Dichelobacter nodosus VCS1703A 5123082 YP_001209054.1 CDS DNO_0124 NC_009446.1 129134 129259 R hypothetical protein complement(129134..129259) Dichelobacter nodosus VCS1703A 5123340 YP_001209055.1 CDS DNO_0125 NC_009446.1 129189 130178 D identified by match to protein family HMM PF00561; alpha-beta fold family protein 129189..130178 Dichelobacter nodosus VCS1703A 5122481 YP_001209056.1 CDS ssb-1 NC_009446.1 130243 130752 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 130243..130752 Dichelobacter nodosus VCS1703A 5123384 YP_001209057.1 CDS DNO_0127 NC_009446.1 130841 131875 R identified by match to protein family HMM TIGR02122; hypothetical protein complement(130841..131875) Dichelobacter nodosus VCS1703A 5122565 YP_001209058.1 CDS DNO_0128 NC_009446.1 131888 132634 R identified by match to protein family HMM PF06104; lipoprotein complement(131888..132634) Dichelobacter nodosus VCS1703A 5123199 YP_001209059.1 CDS dacB NC_009446.1 132631 134013 R identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase complement(132631..134013) Dichelobacter nodosus VCS1703A 5122969 YP_001209060.1 CDS DNO_0130 NC_009446.1 134168 134725 D hypothetical protein 134168..134725 Dichelobacter nodosus VCS1703A 5122282 YP_001209061.1 CDS hemN-2 NC_009446.1 134725 135873 D identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; oxygen-independent coproporphyrinogen III oxidase HemN 134725..135873 Dichelobacter nodosus VCS1703A 5122396 YP_001209062.1 CDS DNO_0132 NC_009446.1 136074 137594 D identified by match to protein family HMM PF02554; carbon starvation protein A 136074..137594 Dichelobacter nodosus VCS1703A 5122955 YP_001209063.1 CDS DNO_0133 NC_009446.1 137810 138712 D identified by match to protein family HMM PF00892; hypothetical protein 137810..138712 Dichelobacter nodosus VCS1703A 5122612 YP_001209064.1 CDS DNO_0134 NC_009446.1 139015 139317 D hypothetical protein 139015..139317 Dichelobacter nodosus VCS1703A 5123366 YP_001209065.1 CDS DNO_0135 NC_009446.1 139333 140130 D hypothetical protein 139333..140130 Dichelobacter nodosus VCS1703A 5122795 YP_001209066.1 CDS feoA NC_009446.1 140175 140423 D identified by match to protein family HMM PF04023; iron transport protein FeoA 140175..140423 Dichelobacter nodosus VCS1703A 5122798 YP_001209067.1 CDS feoB NC_009446.1 140420 142918 D identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; ferrous iron transport protein FeoB 140420..142918 Dichelobacter nodosus VCS1703A 5123374 YP_001209068.1 CDS DNO_0138 NC_009446.1 143287 144177 D response regulator receiver domain-containing protein 143287..144177 Dichelobacter nodosus VCS1703A 5122649 YP_001209069.1 CDS DNO_0139 NC_009446.1 144170 145198 D identified by match to protein family HMM PF00293; match to protein family HMM PF01467; match to protein family HMM TIGR00125; NUDIX domain-containing protein 144170..145198 Dichelobacter nodosus VCS1703A 5122943 YP_001209070.1 CDS DNO_0140 NC_009446.1 145251 146792 R hypothetical protein complement(145251..146792) Dichelobacter nodosus VCS1703A 5123203 YP_001209071.1 CDS DNO_0141 NC_009446.1 147068 148411 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein complement(147068..148411) Dichelobacter nodosus VCS1703A 5122817 YP_001209072.1 CDS DNO_0142 NC_009446.1 148561 149466 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; OxrR-like transcriptional regulator complement(148561..149466) Dichelobacter nodosus VCS1703A 5122748 YP_001209073.1 CDS ahpC NC_009446.1 149616 150179 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; match to protein family HMM TIGR03137; alkyl hydroperoxide reductase C22 subunit 149616..150179 Dichelobacter nodosus VCS1703A 5122425 YP_001209074.1 CDS DNO_0144 NC_009446.1 150253 151812 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM TIGR03140; alkyl hydroperoxide reductase 150253..151812 Dichelobacter nodosus VCS1703A 5122516 YP_001209075.1 CDS DNO_0145 NC_009446.1 151877 152302 R hypothetical protein complement(151877..152302) Dichelobacter nodosus VCS1703A 5123389 YP_001209076.1 CDS DNO_0146 NC_009446.1 152314 152844 R identified by match to protein family HMM PF03029; match to protein family HMM TIGR00231; hypothetical protein complement(152314..152844) Dichelobacter nodosus VCS1703A 5123231 YP_001209077.1 CDS DNO_0147 NC_009446.1 152863 153849 R hypothetical protein complement(152863..153849) Dichelobacter nodosus VCS1703A 5122961 YP_001209078.1 CDS DNO_0148 NC_009446.1 153901 154257 R hypothetical protein complement(153901..154257) Dichelobacter nodosus VCS1703A 5122212 YP_001209079.1 CDS DNO_0149 NC_009446.1 154464 154877 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 154464..154877 Dichelobacter nodosus VCS1703A 5123036 YP_001209080.1 CDS DNO_0150 NC_009446.1 154881 155489 R hypothetical protein complement(154881..155489) Dichelobacter nodosus VCS1703A 5123300 YP_001209081.1 CDS DNO_0151 NC_009446.1 155543 155986 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(155543..155986) Dichelobacter nodosus VCS1703A 5122782 YP_001209082.1 CDS topA NC_009446.1 156001 158409 R identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase I complement(156001..158409) Dichelobacter nodosus VCS1703A 5122687 YP_001209083.1 CDS DNO_0153 NC_009446.1 158479 158958 R hypothetical protein complement(158479..158958) Dichelobacter nodosus VCS1703A 5123394 YP_001209084.1 CDS dprA NC_009446.1 158963 160111 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA processing protein DprA complement(158963..160111) Dichelobacter nodosus VCS1703A 5122336 YP_001209085.1 CDS DNO_0155 NC_009446.1 160111 161163 R identified by match to protein family HMM PF01476; LysM domain-containing protein complement(160111..161163) Dichelobacter nodosus VCS1703A 5122205 YP_001209086.1 CDS def NC_009446.1 161619 162164 D identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; formylmethionine deformylase 161619..162164 Dichelobacter nodosus VCS1703A 5123335 YP_001209087.1 CDS fmt NC_009446.1 162161 163105 D identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 162161..163105 Dichelobacter nodosus VCS1703A 5123310 YP_001209088.1 CDS rsmB NC_009446.1 163157 164413 D identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; rRNA SAM-dependent methyltransferase, Fmu 163157..164413 Dichelobacter nodosus VCS1703A 5123415 YP_001209089.1 CDS DNO_0159 NC_009446.1 164417 165037 D hypothetical protein 164417..165037 Dichelobacter nodosus VCS1703A 5123041 YP_001209090.1 CDS ntrY NC_009446.1 165067 167172 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229; histidine kinase, NtrY 165067..167172 Dichelobacter nodosus VCS1703A 5122356 YP_001209091.1 CDS ntrX NC_009446.1 167233 168591 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; response regulator, NtrX 167233..168591 Dichelobacter nodosus VCS1703A 5122442 YP_001209092.1 CDS DNO_0162 NC_009446.1 168676 169308 D identified by match to protein family HMM PF00313; match to protein family HMM PF06961; cold-shock DNA-binding domain-containing protein 168676..169308 Dichelobacter nodosus VCS1703A 5123416 YP_001209093.1 CDS pgi NC_009446.1 169325 170902 D identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase 169325..170902 Dichelobacter nodosus VCS1703A 5123102 YP_001209094.1 CDS uvrD-1 NC_009446.1 171193 173331 R identified by match to protein family HMM PF00580; DNA helicase II complement(171193..173331) Dichelobacter nodosus VCS1703A 5122169 YP_001209095.1 CDS fba NC_009446.1 173633 174712 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(173633..174712) Dichelobacter nodosus VCS1703A 5122317 YP_001209096.1 CDS csy1 NC_009446.1 174951 176246 D identified by match to protein family HMM TIGR02564; hypothetical protein 174951..176246 Dichelobacter nodosus VCS1703A 5122199 YP_001209097.1 CDS csy2 NC_009446.1 176243 177193 D identified by match to protein family HMM TIGR02565; hypothetical protein 176243..177193 Dichelobacter nodosus VCS1703A 5123097 YP_001209098.1 CDS csy3 NC_009446.1 177209 178219 D identified by match to protein family HMM TIGR02566; hypothetical protein 177209..178219 Dichelobacter nodosus VCS1703A 5122977 YP_001209099.1 CDS csy4 NC_009446.1 178247 178855 D identified by match to protein family HMM TIGR02563; hypothetical protein 178247..178855 Dichelobacter nodosus VCS1703A 5123309 YP_001209100.1 CDS DNO_0171 NC_009446.1 179553 179840 D hypothetical protein 179553..179840 Dichelobacter nodosus VCS1703A 5122281 YP_001209101.1 CDS DNO_0172 NC_009446.1 179837 181435 D hypothetical protein 179837..181435 Dichelobacter nodosus VCS1703A 5123396 YP_001209102.1 CDS vrlS NC_009446.1 181552 184944 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase complement(181552..184944) Dichelobacter nodosus VCS1703A 5122408 YP_001209103.1 CDS vrlR NC_009446.1 184934 185782 R hypothetical protein complement(184934..185782) Dichelobacter nodosus VCS1703A 5123184 YP_001209104.1 CDS vrlQ NC_009446.1 185801 186556 R hypothetical protein complement(185801..186556) Dichelobacter nodosus VCS1703A 5123328 YP_001209105.1 CDS vrlP NC_009446.1 186556 188556 R identified by match to protein family HMM PF08665; hypothetical protein complement(186556..188556) Dichelobacter nodosus VCS1703A 5122372 YP_001209106.1 CDS vrlO NC_009446.1 188553 191450 R identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851; DEAD/DEAH box helicase complement(188553..191450) Dichelobacter nodosus VCS1703A 5123141 YP_001209107.1 CDS vrlN NC_009446.1 191454 191552 R hypothetical protein complement(191454..191552) Dichelobacter nodosus VCS1703A 5122314 YP_001209108.1 CDS vrlM NC_009446.1 191549 193036 R hypothetical protein complement(191549..193036) Dichelobacter nodosus VCS1703A 5122983 YP_001209109.1 CDS vrlL NC_009446.1 193039 195828 R S-adenosyl-L-methionine-dependent methyltransferases family protein VrlL complement(193039..195828) Dichelobacter nodosus VCS1703A 5122344 YP_001209110.1 CDS vrlK NC_009446.1 195920 199651 R hypothetical protein complement(195920..199651) Dichelobacter nodosus VCS1703A 5123072 YP_001209111.1 CDS vrlJ NC_009446.1 199648 200163 R hypothetical protein complement(199648..200163) Dichelobacter nodosus VCS1703A 5122515 YP_001209112.1 CDS vrlI NC_009446.1 200173 200376 R identified by match to protein family HMM TIGR01764; hypothetical protein complement(200173..200376) Dichelobacter nodosus VCS1703A 5123104 YP_001209113.1 CDS vrlH NC_009446.1 200503 201060 R hypothetical protein complement(200503..201060) Dichelobacter nodosus VCS1703A 5122187 YP_001209114.1 CDS vrlG NC_009446.1 201057 201854 R identified by match to protein family HMM PF00310; glutamine amidotransferase domain-containing protein VrlG complement(201057..201854) Dichelobacter nodosus VCS1703A 5122971 YP_001209115.1 CDS vrlF NC_009446.1 201839 202360 R hypothetical protein complement(201839..202360) Dichelobacter nodosus VCS1703A 5122603 YP_001209116.1 CDS vrlE NC_009446.1 202372 203328 R hypothetical protein complement(202372..203328) Dichelobacter nodosus VCS1703A 5122349 YP_001209117.1 CDS vrlD NC_009446.1 203575 203832 R hypothetical protein complement(203575..203832) Dichelobacter nodosus VCS1703A 5122709 YP_001209118.1 CDS vrlC NC_009446.1 203845 206472 R identified by match to protein family HMM PF02012; hypothetical protein complement(203845..206472) Dichelobacter nodosus VCS1703A 5122901 YP_001209119.1 CDS DNO_0191 NC_009446.1 206945 207217 D hypothetical protein 206945..207217 Dichelobacter nodosus VCS1703A 5122606 YP_001209120.1 CDS DNO_0192 NC_009446.1 207550 207969 D hypothetical protein 207550..207969 Dichelobacter nodosus VCS1703A 5122796 YP_001209121.1 CDS DNO_0194 NC_009446.1 208788 209279 R identified by match to protein family HMM PF05433; lipoprotein complement(208788..209279) Dichelobacter nodosus VCS1703A 5122209 YP_001209122.1 CDS DNO_0195 NC_009446.1 209318 210079 R identified by match to protein family HMM PF01987; hypothetical protein complement(209318..210079) Dichelobacter nodosus VCS1703A 5123206 YP_001209123.1 CDS pncB NC_009446.1 210254 211702 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 210254..211702 Dichelobacter nodosus VCS1703A 5122498 YP_001209124.1 CDS nadE NC_009446.1 211699 212445 D identified by match to protein family HMM PF02540; match to protein family HMM PF06508; match to protein family HMM TIGR00552; NAD+ synthetase 211699..212445 Dichelobacter nodosus VCS1703A 5122573 YP_001209125.1 CDS ppa NC_009446.1 212534 213067 D identified by match to protein family HMM PF00719; inorganic pyrophosphatase 212534..213067 Dichelobacter nodosus VCS1703A 5122722 YP_001209126.1 CDS DNO_0200 NC_009446.1 213737 215290 D identified by match to protein family HMM PF03806; AbgT transporter family protein 213737..215290 Dichelobacter nodosus VCS1703A 5122409 YP_001209127.1 CDS pepT-1 NC_009446.1 215302 216522 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 215302..216522 Dichelobacter nodosus VCS1703A 5123079 YP_001209128.1 CDS recF NC_009446.1 216912 217982 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF complement(216912..217982) Dichelobacter nodosus VCS1703A 5122598 YP_001209129.1 CDS DNO_0203 NC_009446.1 217988 219475 R identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg chelatase family protein complement(217988..219475) Dichelobacter nodosus VCS1703A 5123214 YP_001209130.1 CDS DNO_0204 NC_009446.1 219475 220269 R identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; alanine racemase domain-containing protein complement(219475..220269) Dichelobacter nodosus VCS1703A 5123344 YP_001209131.1 CDS DNO_0205 NC_009446.1 220292 220807 R identified by match to protein family HMM PF04186; inner membrane protein FxsA complement(220292..220807) Dichelobacter nodosus VCS1703A 5123297 YP_001209132.1 CDS polA NC_009446.1 220833 223538 R identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA polymerase I complement(220833..223538) Dichelobacter nodosus VCS1703A 5122749 YP_001209133.1 CDS purN NC_009446.1 223664 224251 D identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 223664..224251 Dichelobacter nodosus VCS1703A 5123299 YP_001209134.1 CDS cysS NC_009446.1 224262 225632 R identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteinyl-tRNA synthetase complement(224262..225632) Dichelobacter nodosus VCS1703A 5123166 YP_001209135.1 CDS DNO_0209 NC_009446.1 225848 226348 D identified by match to protein family HMM PF00160; peptidylprolyl cis-trans isomerase, cyclophilin- type 225848..226348 Dichelobacter nodosus VCS1703A 5122871 YP_001209136.1 CDS DNO_0210 NC_009446.1 226367 226861 D identified by match to protein family HMM PF00160; peptidylprolyl cis-trans isomerase, cyclophilin- type 226367..226861 Dichelobacter nodosus VCS1703A 5122845 YP_001209137.1 CDS lpxH NC_009446.1 226861 227571 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR01854; UDP-2,3-diacylglucosamine hydrolase 226861..227571 Dichelobacter nodosus VCS1703A 5123182 YP_001209138.1 CDS DNO_0212 NC_009446.1 227716 229275 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase family protein 227716..229275 Dichelobacter nodosus VCS1703A 5122201 YP_001209139.1 CDS glpK NC_009446.1 229309 230802 D identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase 229309..230802 Dichelobacter nodosus VCS1703A 5122935 YP_001209140.1 CDS glpF NC_009446.1 230807 231541 D identified by match to protein family HMM PF00230; major intrinsic protein superfamily glycerol facilitator protein 230807..231541 Dichelobacter nodosus VCS1703A 5122609 YP_001209141.1 CDS DNO_0215 NC_009446.1 232252 232674 R hypothetical protein complement(232252..232674) Dichelobacter nodosus VCS1703A 5122424 YP_001209142.1 CDS DNO_0216 NC_009446.1 232684 233109 R hypothetical protein complement(232684..233109) Dichelobacter nodosus VCS1703A 5122271 YP_001209143.1 CDS DNO_0218 NC_009446.1 234277 235224 R identified by match to protein family HMM PF04373; hypothetical protein complement(234277..235224) Dichelobacter nodosus VCS1703A 5122176 YP_001209144.1 CDS DNO_0219 NC_009446.1 235226 235933 R identified by match to protein family HMM PF01863; hypothetical protein complement(235226..235933) Dichelobacter nodosus VCS1703A 5122611 YP_001209145.1 CDS hsdR NC_009446.1 235942 239040 R identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I site-specific deoxyribonuclease complement(235942..239040) Dichelobacter nodosus VCS1703A 5123437 YP_001209146.1 CDS DNO_0221 NC_009446.1 239033 239476 R hypothetical protein complement(239033..239476) Dichelobacter nodosus VCS1703A 5122164 YP_001209147.1 CDS hsdS NC_009446.1 239473 240711 R identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein complement(239473..240711) Dichelobacter nodosus VCS1703A 5122907 YP_001209148.1 CDS hsdM NC_009446.1 240702 243182 R identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497; type I restriction-modification system, M subunit complement(240702..243182) Dichelobacter nodosus VCS1703A 5122357 YP_001209149.1 CDS DNO_0224 NC_009446.1 243544 244281 D hypothetical protein 243544..244281 Dichelobacter nodosus VCS1703A 5122300 YP_001209150.1 CDS DNO_0225 NC_009446.1 244292 245086 D identified by match to protein family HMM PF01553; acyltransferase family protein 244292..245086 Dichelobacter nodosus VCS1703A 5122696 YP_001209151.1 CDS DNO_0226 NC_009446.1 245143 245457 R identified by match to protein family HMM PF00216; DNA-binding protein HU complement(245143..245457) Dichelobacter nodosus VCS1703A 5122774 YP_001209152.1 CDS lon NC_009446.1 245649 248066 R identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La complement(245649..248066) Dichelobacter nodosus VCS1703A 5123218 YP_001209153.1 CDS clpX NC_009446.1 248080 249357 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(248080..249357) Dichelobacter nodosus VCS1703A 5123095 YP_001209154.1 CDS clpP NC_009446.1 249374 249985 R identified by match to protein family HMM PF00574; match to protein family HMM TIGR00493; ATP-dependent Clp protease, proteolytic subunit ClpP complement(249374..249985) Dichelobacter nodosus VCS1703A 5122437 YP_001209155.1 CDS tig NC_009446.1 250227 251546 R identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor complement(250227..251546) Dichelobacter nodosus VCS1703A 5123186 YP_001209156.1 CDS DNO_0232 NC_009446.1 251703 251933 R hypothetical protein complement(251703..251933) Dichelobacter nodosus VCS1703A 5122210 YP_001209157.1 CDS DNO_0234 NC_009446.1 252373 254256 D hypothetical protein 252373..254256 Dichelobacter nodosus VCS1703A 5122167 YP_001209158.1 CDS DNO_0235 NC_009446.1 254189 255637 D identified by match to protein family HMM PF00353; calcium-binding domain-containing protein 254189..255637 Dichelobacter nodosus VCS1703A 5122763 YP_001209159.1 CDS trpS NC_009446.1 255700 256701 R identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophanyl-tRNA synthetase complement(255700..256701) Dichelobacter nodosus VCS1703A 5122958 YP_001209160.1 CDS DNO_0237 NC_009446.1 256698 257324 R identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; SUA5/yciO/yrdC domain-containing protein complement(256698..257324) Dichelobacter nodosus VCS1703A 5123202 YP_001209161.1 CDS DNO_0238 NC_009446.1 257389 259443 R identified by match to protein family HMM PF00563; hypothetical protein complement(257389..259443) Dichelobacter nodosus VCS1703A 5122931 YP_001209162.1 CDS DNO_0239 NC_009446.1 259664 260677 D identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase 259664..260677 Dichelobacter nodosus VCS1703A 5122402 YP_001209163.1 CDS DNO_0240 NC_009446.1 260681 262537 D identified by match to protein family HMM PF01266; match to protein family HMM PF05430; match to protein family HMM TIGR03197; hypothetical protein 260681..262537 Dichelobacter nodosus VCS1703A 5122288 YP_001209164.1 CDS DNO_0241 NC_009446.1 262546 263100 D hypothetical protein 262546..263100 Dichelobacter nodosus VCS1703A 5123116 YP_001209165.1 CDS DNO_0242 NC_009446.1 263150 265180 R identified by match to protein family HMM PF01432; M3 family oligopeptidase complement(263150..265180) Dichelobacter nodosus VCS1703A 5123343 YP_001209166.1 CDS DNO_0243 NC_009446.1 265258 265686 R identified by match to protein family HMM PF04970; hypothetical protein complement(265258..265686) Dichelobacter nodosus VCS1703A 5123069 YP_001209167.1 CDS holA NC_009446.1 265710 266729 R identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta complement(265710..266729) Dichelobacter nodosus VCS1703A 5122720 YP_001209168.1 CDS DNO_0245 NC_009446.1 266726 267220 R lipoprotein complement(266726..267220) Dichelobacter nodosus VCS1703A 5122906 YP_001209169.1 CDS leuS NC_009446.1 267217 269820 R identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucyl-tRNA synthetase complement(267217..269820) Dichelobacter nodosus VCS1703A 5122373 YP_001209170.1 CDS lnt NC_009446.1 269789 271354 R identified by match to protein family HMM PF00795; match to protein family HMM TIGR00546; apolipoprotein N-acyltransferase complement(269789..271354) Dichelobacter nodosus VCS1703A 5122621 YP_001209171.1 CDS DNO_0248 NC_009446.1 271510 272541 R identified by match to protein family HMM TIGR02122; lipoprotein complement(271510..272541) Dichelobacter nodosus VCS1703A 5122503 YP_001209172.1 CDS DNO_0249 NC_009446.1 272600 273376 R identified by match to protein family HMM PF00149; hypothetical protein complement(272600..273376) Dichelobacter nodosus VCS1703A 5122616 YP_001209173.1 CDS recC NC_009446.1 274269 277541 R exodeoxyribonuclease V subunit gamma complement(274269..277541) Dichelobacter nodosus VCS1703A 5122717 YP_001209174.1 CDS DNO_0252 NC_009446.1 277560 278681 R identified by match to protein family HMM PF01757; hypothetical protein complement(277560..278681) Dichelobacter nodosus VCS1703A 5122380 YP_001209175.1 CDS DNO_0253 NC_009446.1 278771 279637 D hypothetical protein 278771..279637 Dichelobacter nodosus VCS1703A 5122915 YP_001209176.1 CDS dgt NC_009446.1 279647 280969 D identified by match to protein family HMM TIGR01353; deoxyguanosinetriphosphate triphosphohydrolase 279647..280969 Dichelobacter nodosus VCS1703A 5122265 YP_001209177.1 CDS DNO_0255 NC_009446.1 281032 281961 R identified by match to protein family HMM PF09084; hypothetical protein complement(281032..281961) Dichelobacter nodosus VCS1703A 5122440 YP_001209178.1 CDS DNO_0256 NC_009446.1 281977 282711 R identified by match to protein family HMM PF00528; ABC transporter complement(281977..282711) Dichelobacter nodosus VCS1703A 5122689 YP_001209179.1 CDS DNO_0257 NC_009446.1 282708 283427 R identified by match to protein family HMM PF00005; match to protein family HMM PF02463; ABC transporter complement(282708..283427) Dichelobacter nodosus VCS1703A 5123447 YP_001209180.1 CDS gepC NC_009446.1 283630 284730 R hypothetical protein complement(283630..284730) Dichelobacter nodosus VCS1703A 5122525 YP_001209181.1 CDS gepB NC_009446.1 285019 285615 D hypothetical protein 285019..285615 Dichelobacter nodosus VCS1703A 5123397 YP_001209182.1 CDS gepA NC_009446.1 285713 286183 D hypothetical protein 285713..286183 Dichelobacter nodosus VCS1703A 5122536 YP_001209183.1 CDS DNO_0261 NC_009446.1 286380 286565 D hypothetical protein 286380..286565 Dichelobacter nodosus VCS1703A 5123127 YP_001209184.1 CDS DNO_0262 NC_009446.1 286641 286751 R hypothetical protein complement(286641..286751) Dichelobacter nodosus VCS1703A 5123238 YP_001209185.1 CDS regA1 NC_009446.1 286748 287446 R identified by match to protein family HMM PF00717; match to protein family HMM PF01381; regulatory protein RegA1 complement(286748..287446) Dichelobacter nodosus VCS1703A 5122460 YP_001209186.1 CDS vapD2 NC_009446.1 289759 290040 R identified by match to protein family HMM PF04605; virulence-associated protein VapD2 complement(289759..290040) Dichelobacter nodosus VCS1703A 5122894 YP_001209187.1 CDS vapE2 NC_009446.1 290906 292216 R identified by match to protein family HMM PF05272; virulence-associated protein VapE2 complement(290906..292216) Dichelobacter nodosus VCS1703A 5123353 YP_001209188.1 CDS vapF NC_009446.1 292206 292553 R virulence-associated protein VapF complement(292206..292553) Dichelobacter nodosus VCS1703A 5122548 YP_001209189.1 CDS DNO_0268 NC_009446.1 292386 292517 D hypothetical protein 292386..292517 Dichelobacter nodosus VCS1703A 5123301 YP_001209190.1 CDS vapG2 NC_009446.1 292557 292778 R virulence-associated protein VapG2 complement(292557..292778) Dichelobacter nodosus VCS1703A 5123319 YP_001209191.1 CDS vapA2 NC_009446.1 293128 293475 D identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapA2 293128..293475 Dichelobacter nodosus VCS1703A 5123251 YP_001209192.1 CDS DNO_0270 NC_009446.1 293468 293728 R hypothetical protein complement(293468..293728) Dichelobacter nodosus VCS1703A 5122335 YP_001209193.1 CDS vapI NC_009446.1 293791 294117 R identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapI complement(293791..294117) Dichelobacter nodosus VCS1703A 5123024 YP_001209194.1 CDS DNO_0273 NC_009446.1 294127 294402 R identified by match to protein family HMM PF05015; plasmid maintenance system killer family protein complement(294127..294402) Dichelobacter nodosus VCS1703A 5122428 YP_001209195.1 CDS toxA1 NC_009446.1 295301 295660 D identified by match to protein family HMM PF05015; plasmid maintenance system killer family protein ToxA1 295301..295660 Dichelobacter nodosus VCS1703A 5122904 YP_001209196.1 CDS vapA1 NC_009446.1 295673 295981 D identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapA1 295673..295981 Dichelobacter nodosus VCS1703A 5122248 YP_001209197.1 CDS vapB1 NC_009446.1 296317 296547 D identified by match to protein family HMM PF04014; virulence-associated protein VapB1 296317..296547 Dichelobacter nodosus VCS1703A 5123307 YP_001209198.1 CDS vapC1 NC_009446.1 296544 296951 D identified by match to protein family HMM PF01850; virulence-associated protein VapC1 296544..296951 Dichelobacter nodosus VCS1703A 5122142 YP_001209199.1 CDS vapD1 NC_009446.1 297073 297354 R identified by match to protein family HMM PF04605; virulence-associated protein VapD1 complement(297073..297354) Dichelobacter nodosus VCS1703A 5122794 YP_001209200.1 CDS vapE1 NC_009446.1 297992 299305 R identified by match to protein family HMM PF05272; virulence-associated protein VapE1 complement(297992..299305) Dichelobacter nodosus VCS1703A 5122713 YP_001209201.1 CDS vapG1 NC_009446.1 299401 299607 R virulence-associated protein VapG1 complement(299401..299607) Dichelobacter nodosus VCS1703A 5122784 YP_001209202.1 CDS vapH NC_009446.1 299586 299891 R virulence-associated protein VapH complement(299586..299891) Dichelobacter nodosus VCS1703A 5123112 YP_001209203.1 CDS intA1 NC_009446.1 299986 301191 R identified by match to protein family HMM PF00589; integrase A1 complement(299986..301191) Dichelobacter nodosus VCS1703A 5123364 YP_001209204.1 CDS glpA NC_009446.1 301542 301736 R identified by match to protein family HMM PF02599; match to protein family HMM TIGR00202; carbon storage regulator complement(301542..301736) Dichelobacter nodosus VCS1703A 5122128 YP_001209205.1 CDS DNO_0285 NC_009446.1 301850 303091 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR00657; aspartate kinase family protein complement(301850..303091) Dichelobacter nodosus VCS1703A 5122134 YP_001209206.1 CDS alaS NC_009446.1 303096 305717 R identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanyl-tRNA synthetase complement(303096..305717) Dichelobacter nodosus VCS1703A 5122544 YP_001209207.1 CDS recX NC_009446.1 305817 306290 R identified by match to protein family HMM PF02631; regulatory protein complement(305817..306290) Dichelobacter nodosus VCS1703A 5123429 YP_001209208.1 CDS recA NC_009446.1 306280 307332 R identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; DNA recombination protein RecA complement(306280..307332) Dichelobacter nodosus VCS1703A 5122569 YP_001209209.1 CDS DNO_0289 NC_009446.1 307392 307955 R hypothetical protein complement(307392..307955) Dichelobacter nodosus VCS1703A 5123469 YP_001209210.1 CDS gmhA NC_009446.1 308126 308689 R identified by match to protein family HMM TIGR00441; phosphoheptose isomerase complement(308126..308689) Dichelobacter nodosus VCS1703A 5122880 YP_001209211.1 CDS DNO_0291 NC_009446.1 308839 309642 D identified by match to protein family HMM PF02673; match to protein family HMM TIGR00753; undecaprenol kinase 308839..309642 Dichelobacter nodosus VCS1703A 5122394 YP_001209212.1 CDS secB NC_009446.1 309721 310194 D identified by match to protein family HMM PF02556; match to protein family HMM TIGR00809; protein export chaperone SecB 309721..310194 Dichelobacter nodosus VCS1703A 5123101 YP_001209213.1 CDS DNO_0293 NC_009446.1 310194 311189 D identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03446; match to protein family HMM PF07479; glycerol-3-phosphate dehydrogenase 310194..311189 Dichelobacter nodosus VCS1703A 5122272 YP_001209214.1 CDS rluA NC_009446.1 311204 311815 D identified by match to protein family HMM PF00849; ribosomal large subunit pseudouridine synthase, RluA 311204..311815 Dichelobacter nodosus VCS1703A 5123320 YP_001209215.1 CDS DNO_0295 NC_009446.1 311826 312887 R identified by match to protein family HMM PF01594; hypothetical protein complement(311826..312887) Dichelobacter nodosus VCS1703A 5122513 YP_001209216.1 CDS DNO_0296 NC_009446.1 312988 314325 R identified by match to protein family HMM PF07219; match to protein family HMM PF07719; HemY protein complement(312988..314325) Dichelobacter nodosus VCS1703A 5123467 YP_001209217.1 CDS DNO_0297 NC_009446.1 314328 316082 R hypothetical protein complement(314328..316082) Dichelobacter nodosus VCS1703A 5122724 YP_001209218.1 CDS hemD NC_009446.1 316079 316834 R identified by match to protein family HMM PF02602; uroporphyrinogen-III synthase family protein HemD complement(316079..316834) Dichelobacter nodosus VCS1703A 5123357 YP_001209219.1 CDS hemC NC_009446.1 316818 317735 R identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212; porphobilinogen deaminase complement(316818..317735) Dichelobacter nodosus VCS1703A 5122909 YP_001209220.1 CDS DNO_0300 NC_009446.1 317880 318254 D lipoprotein 317880..318254 Dichelobacter nodosus VCS1703A 5122258 YP_001209221.1 CDS DNO_0301 NC_009446.1 318306 319091 R identified by match to protein family HMM PF07072; hypothetical protein complement(318306..319091) Dichelobacter nodosus VCS1703A 5123109 YP_001209222.1 CDS rne NC_009446.1 319459 323160 D identified by match to protein family HMM PF00575; match to protein family HMM PF00923; match to protein family HMM TIGR00757; match to protein family HMM TIGR00876; ribonuclease E 319459..323160 Dichelobacter nodosus VCS1703A 5122665 YP_001209223.1 CDS DNO_0303 NC_009446.1 323153 323347 D hypothetical protein 323153..323347 Dichelobacter nodosus VCS1703A 5123225 YP_001209224.1 CDS kdsB NC_009446.1 323337 324071 D identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466; 3-deoxy-D-manno-octulosonate cytidylyltransferase 323337..324071 Dichelobacter nodosus VCS1703A 5123161 YP_001209225.1 CDS uvrC NC_009446.1 324064 325887 D identified by match to protein family HMM PF00633; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C 324064..325887 Dichelobacter nodosus VCS1703A 5123232 YP_001209226.1 CDS pgsA NC_009446.1 325889 326446 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 325889..326446 Dichelobacter nodosus VCS1703A 5122546 YP_001209227.1 CDS rnt NC_009446.1 326456 327076 D Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 326456..327076 Dichelobacter nodosus VCS1703A 5122833 YP_001209228.1 CDS DNO_0308 NC_009446.1 327073 327651 D hypothetical protein 327073..327651 Dichelobacter nodosus VCS1703A 5123450 YP_001209229.1 CDS nagA NC_009446.1 327905 329068 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase complement(327905..329068) Dichelobacter nodosus VCS1703A 5122938 YP_001209230.1 CDS DNO_0310 NC_009446.1 329383 329757 D identified by match to protein family HMM PF04175; match to protein family HMM TIGR00743; hypothetical protein 329383..329757 Dichelobacter nodosus VCS1703A 5122942 YP_001209231.1 CDS DNO_0311 NC_009446.1 329908 331362 D identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 329908..331362 Dichelobacter nodosus VCS1703A 5123085 YP_001209232.1 CDS DNO_0312 NC_009446.1 331599 333002 D identified by match to protein family HMM PF00691; OmpA family domain-containing protein 331599..333002 Dichelobacter nodosus VCS1703A 5122849 YP_001209233.1 CDS DNO_0313 NC_009446.1 333275 334792 D lipoprotein 333275..334792 Dichelobacter nodosus VCS1703A 5122500 YP_001209234.1 CDS fabA NC_009446.1 334816 335346 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 334816..335346 Dichelobacter nodosus VCS1703A 5122223 YP_001209235.1 CDS fabB NC_009446.1 335424 336638 D identified by match to protein family HMM PF00109; match to protein family HMM PF02801; beta-ketoacyl synthase 335424..336638 Dichelobacter nodosus VCS1703A 5123347 YP_001209236.1 CDS DNO_0316 NC_009446.1 336643 337224 D hypothetical protein 336643..337224 Dichelobacter nodosus VCS1703A 5122364 YP_001209237.1 CDS DNO_0317 NC_009446.1 337237 337896 D identified by match to protein family HMM PF02677; hypothetical protein 337237..337896 Dichelobacter nodosus VCS1703A 5122735 YP_001209238.1 CDS DNO_0318 NC_009446.1 338072 339031 D identified by match to protein family HMM PF01471; hypothetical protein 338072..339031 Dichelobacter nodosus VCS1703A 5122497 YP_001209239.1 CDS tgt NC_009446.1 339175 340284 D identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; queuine tRNA-ribosyltransferase 339175..340284 Dichelobacter nodosus VCS1703A 5123267 YP_001209240.1 CDS DNO_0320 NC_009446.1 340376 340984 R identified by match to protein family HMM PF00691; OmpA family protein complement(340376..340984) Dichelobacter nodosus VCS1703A 5122337 YP_001209241.1 CDS gyrA NC_009446.1 341292 343877 D identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 341292..343877 Dichelobacter nodosus VCS1703A 5122685 YP_001209242.1 CDS DNO_0322 NC_009446.1 344146 344424 D identified by match to protein family HMM PF05656; hypothetical protein 344146..344424 Dichelobacter nodosus VCS1703A 5122619 YP_001209243.1 CDS ilvA NC_009446.1 344488 345483 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01124; threonine dehydratase complement(344488..345483) Dichelobacter nodosus VCS1703A 5122509 YP_001209244.1 CDS dnaB NC_009446.1 345802 347187 D identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 345802..347187 Dichelobacter nodosus VCS1703A 5123371 YP_001209245.1 CDS alr NC_009446.1 347188 348261 D identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 347188..348261 Dichelobacter nodosus VCS1703A 5122618 YP_001209246.1 CDS radA NC_009446.1 348254 349618 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 348254..349618 Dichelobacter nodosus VCS1703A 5122405 YP_001209247.1 CDS galU NC_009446.1 349622 350512 D identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP--glucose-1-phosphate uridylyltransferase 349622..350512 Dichelobacter nodosus VCS1703A 5123392 YP_001209248.1 CDS DNO_0328 NC_009446.1 350587 351003 D identified by match to protein family HMM PF01797; transposase IS200-like protein 350587..351003 Dichelobacter nodosus VCS1703A 5122673 YP_001209249.1 CDS sucA NC_009446.1 351042 353795 D identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239; 2-oxoglutarate dehydrogenase, E1 component 351042..353795 Dichelobacter nodosus VCS1703A 5123126 YP_001209250.1 CDS sucB NC_009446.1 353831 354856 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM TIGR01347; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 353831..354856 Dichelobacter nodosus VCS1703A 5123094 YP_001209251.1 CDS DNO_0330 NC_009446.1 354853 356694 R identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; competence family protein complement(354853..356694) Dichelobacter nodosus VCS1703A 5122253 YP_001209252.1 CDS DNO_0332 NC_009446.1 356716 357267 D hypothetical protein 356716..357267 Dichelobacter nodosus VCS1703A 5122231 YP_001209253.1 CDS DNO_0333 NC_009446.1 357509 358405 D identified by match to protein family HMM PF00691; OmpA family protein 357509..358405 Dichelobacter nodosus VCS1703A 5122683 YP_001209254.1 CDS DNO_0334 NC_009446.1 358452 366740 D identified by match to protein family HMM PF00353; RTX family protein 358452..366740 Dichelobacter nodosus VCS1703A 5123149 YP_001209255.1 CDS DNO_0335 NC_009446.1 366787 367674 D identified by match to protein family HMM PF01061; ABC-2 type transporter family protein 366787..367674 Dichelobacter nodosus VCS1703A 5122329 YP_001209256.1 CDS DNO_0336 NC_009446.1 367684 368385 D identified by match to protein family HMM PF00005; ABC transporter 367684..368385 Dichelobacter nodosus VCS1703A 5123276 YP_001209257.1 CDS glf NC_009446.1 368557 369702 D identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase 368557..369702 Dichelobacter nodosus VCS1703A 5122291 YP_001209258.1 CDS DNO_0339 NC_009446.1 369703 370668 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 369703..370668 Dichelobacter nodosus VCS1703A 5122450 YP_001209259.1 CDS DNO_0340 NC_009446.1 370682 372037 D identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025; sugar transferase 370682..372037 Dichelobacter nodosus VCS1703A 5122157 YP_001209260.1 CDS DNO_0341 NC_009446.1 372099 372722 R identified by match to protein family HMM PF05951; match to protein family HMM PF08291; match to protein family HMM TIGR01409; hypothetical protein complement(372099..372722) Dichelobacter nodosus VCS1703A 5123265 YP_001209261.1 CDS DNO_0342 NC_009446.1 372987 373658 D hypothetical protein 372987..373658 Dichelobacter nodosus VCS1703A 5122704 YP_001209262.1 CDS DNO_0343 NC_009446.1 373655 374227 D identified by match to protein family HMM PF01300; hypothetical protein 373655..374227 Dichelobacter nodosus VCS1703A 5122846 YP_001209263.1 CDS pilM NC_009446.1 374487 375500 D type IV fimbrial biogenesis protein PilM 374487..375500 Dichelobacter nodosus VCS1703A 5122723 YP_001209264.1 CDS pilN NC_009446.1 375500 376147 D identified by match to protein family HMM PF05137; type IV fimbrial assembly protein PilN 375500..376147 Dichelobacter nodosus VCS1703A 5123376 YP_001209265.1 CDS pilO NC_009446.1 376160 376828 D type IV fimbrial biogenesis protein PilO 376160..376828 Dichelobacter nodosus VCS1703A 5122702 YP_001209266.1 CDS pilP NC_009446.1 376844 377464 D type IV fimbrial biogenesis protein PilP 376844..377464 Dichelobacter nodosus VCS1703A 5122758 YP_001209267.1 CDS pilQ NC_009446.1 377487 379691 D identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; match to protein family HMM TIGR02515; type IV fimbrial pore PilQ 377487..379691 Dichelobacter nodosus VCS1703A 5122787 YP_001209268.1 CDS gatB NC_009446.1 379752 381188 D identified by match to protein family HMM PF01162; match to protein family HMM PF02637; match to protein family HMM PF02934; match to protein family HMM TIGR00133; glutamyl-tRNA(Gln) amidotransferase subunit B 379752..381188 Dichelobacter nodosus VCS1703A 5123246 YP_001209269.1 CDS typA NC_009446.1 381264 383087 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 381264..383087 Dichelobacter nodosus VCS1703A 5122511 YP_001209270.1 CDS valS NC_009446.1 383207 386005 D identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422; valyl-tRNA synthetase 383207..386005 Dichelobacter nodosus VCS1703A 5122838 YP_001209271.1 CDS DNO_0352 NC_009446.1 386211 387716 D identified by match to protein family HMM PF03577; U32 family peptidase 386211..387716 Dichelobacter nodosus VCS1703A 5122495 YP_001209272.1 CDS dksA NC_009446.1 387778 388209 R identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420; RNA polymerase-binding protein DksA complement(387778..388209) Dichelobacter nodosus VCS1703A 5123027 YP_001209273.1 CDS DNO_0354 NC_009446.1 388268 389074 R identified by match to protein family HMM PF00950; zinc uptake system protein complement(388268..389074) Dichelobacter nodosus VCS1703A 5123283 YP_001209274.1 CDS DNO_0355 NC_009446.1 389071 389766 R identified by match to protein family HMM PF00005; zinc uptake system ATP-binding protein complement(389071..389766) Dichelobacter nodosus VCS1703A 5123291 YP_001209275.1 CDS priA NC_009446.1 389822 391954 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00595; primosomal protein N' 389822..391954 Dichelobacter nodosus VCS1703A 5123015 YP_001209276.1 CDS DNO_0357 NC_009446.1 392027 392230 D hypothetical protein 392027..392230 Dichelobacter nodosus VCS1703A 5122283 YP_001209277.1 CDS DNO_0358 NC_009446.1 392304 395444 R hypothetical protein complement(392304..395444) Dichelobacter nodosus VCS1703A 5123451 YP_001209278.1 CDS tilS NC_009446.1 395644 396891 D identified by match to protein family HMM PF01171; match to protein family HMM PF09179; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase 395644..396891 Dichelobacter nodosus VCS1703A 5123224 YP_001209279.1 CDS pyrG NC_009446.1 396938 398572 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 396938..398572 Dichelobacter nodosus VCS1703A 5123087 YP_001209280.1 CDS kdsA NC_009446.1 398569 399402 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 398569..399402 Dichelobacter nodosus VCS1703A 5122293 YP_001209281.1 CDS eno NC_009446.1 399399 400691 D identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; enolase 399399..400691 Dichelobacter nodosus VCS1703A 5122982 YP_001209282.1 CDS DNO_0363 NC_009446.1 400749 401231 D identified by match to protein family HMM PF04977; septum formation initiator family protein 400749..401231 Dichelobacter nodosus VCS1703A 5122198 YP_001209283.1 CDS DNO_0364 NC_009446.1 401331 403190 D identified by match to protein family HMM PF00005; ABC transporter 401331..403190 Dichelobacter nodosus VCS1703A 5123422 YP_001209284.1 CDS sbcD NC_009446.1 403191 404381 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00619; exonuclease SbcD 403191..404381 Dichelobacter nodosus VCS1703A 5122820 YP_001209285.1 CDS sbcC NC_009446.1 404371 407337 D identified by match to protein family HMM PF02463; exonuclease SbcC 404371..407337 Dichelobacter nodosus VCS1703A 5122586 YP_001209286.1 CDS DNO_0367 NC_009446.1 407341 408324 D identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase family protein 407341..408324 Dichelobacter nodosus VCS1703A 5123188 YP_001209287.1 CDS DNO_0368 NC_009446.1 408332 409201 R identified by match to protein family HMM PF04018; hypothetical protein complement(408332..409201) Dichelobacter nodosus VCS1703A 5122800 YP_001209288.1 CDS DNO_0369 NC_009446.1 409209 410732 R identified by match to protein family HMM PF02541; exopolyphosphatase complement(409209..410732) Dichelobacter nodosus VCS1703A 5122585 YP_001209289.1 CDS DNO_0370 NC_009446.1 410834 411358 R identified by match to protein family HMM PF05981; lipoprotein complement(410834..411358) Dichelobacter nodosus VCS1703A 5122404 YP_001209290.1 CDS DNO_0371 NC_009446.1 411355 412146 R hypothetical protein complement(411355..412146) Dichelobacter nodosus VCS1703A 5123003 YP_001209291.1 CDS DNO_0372 NC_009446.1 412127 412579 R identified by match to protein family HMM PF01957; hypothetical protein complement(412127..412579) Dichelobacter nodosus VCS1703A 5123342 YP_001209292.1 CDS DNO_0373 NC_009446.1 412576 413514 R identified by match to protein family HMM PF01145; SPFH domain-containing protein complement(412576..413514) Dichelobacter nodosus VCS1703A 5122993 YP_001209293.1 CDS DNO_0374 NC_009446.1 413593 414156 D hypothetical protein 413593..414156 Dichelobacter nodosus VCS1703A 5122647 YP_001209294.1 CDS DNO_0375 NC_009446.1 414149 414613 D hypothetical protein 414149..414613 Dichelobacter nodosus VCS1703A 5122744 YP_001209295.1 CDS guaB NC_009446.1 414796 416250 D identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 414796..416250 Dichelobacter nodosus VCS1703A 5122537 YP_001209296.1 CDS DNO_0377 NC_009446.1 416362 417108 D extracellular solute-binding family protein 416362..417108 Dichelobacter nodosus VCS1703A 5123368 YP_001209297.1 CDS DNO_0378 NC_009446.1 417092 417193 D hypothetical protein 417092..417193 Dichelobacter nodosus VCS1703A 5123336 YP_001209298.1 CDS DNO_0379 NC_009446.1 417233 417619 D hypothetical protein 417233..417619 Dichelobacter nodosus VCS1703A 5122853 YP_001209299.1 CDS guaA NC_009446.1 417628 419181 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 417628..419181 Dichelobacter nodosus VCS1703A 5122147 YP_001209300.1 CDS uvrD-2 NC_009446.1 419271 421265 R identified by match to protein family HMM PF00580; DNA helicase UvrD complement(419271..421265) Dichelobacter nodosus VCS1703A 5122234 YP_001209301.1 CDS omp1E NC_009446.1 423569 425506 R outer membrane protein 1E complement(423569..425506) Dichelobacter nodosus VCS1703A 5122341 YP_001209302.1 CDS omp1D NC_009446.1 425776 427914 D outer membrane protein 1D 425776..427914 Dichelobacter nodosus VCS1703A 5122792 YP_001209303.1 CDS DNO_0386 NC_009446.1 430190 430543 R identified by match to protein family HMM PF01797; transposase IS200-like protein complement(430190..430543) Dichelobacter nodosus VCS1703A 5122715 YP_001209304.1 CDS DNO_0387 NC_009446.1 430565 431692 D identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 430565..431692 Dichelobacter nodosus VCS1703A 5122860 YP_001209305.1 CDS DNO_0388 NC_009446.1 431884 432333 R identified by match to protein family HMM PF00300; hypothetical protein complement(431884..432333) Dichelobacter nodosus VCS1703A 5123074 YP_001209306.1 CDS ligA NC_009446.1 432437 434473 R identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; NAD-dependent DNA ligase complement(432437..434473) Dichelobacter nodosus VCS1703A 5122780 YP_001209307.1 CDS DNO_0390 NC_009446.1 434452 435096 R hypothetical protein complement(434452..435096) Dichelobacter nodosus VCS1703A 5123078 YP_001209308.1 CDS DNO_0391 NC_009446.1 435550 436149 D identified by match to protein family HMM PF01926; GTPase 435550..436149 Dichelobacter nodosus VCS1703A 5122518 YP_001209309.1 CDS DNO_0392 NC_009446.1 436154 436930 D identified by match to protein family HMM PF01925; hypothetical protein 436154..436930 Dichelobacter nodosus VCS1703A 5122561 YP_001209310.1 CDS DNO_0393 NC_009446.1 437011 438036 D identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; L-asparaginase II 437011..438036 Dichelobacter nodosus VCS1703A 5122154 YP_001209311.1 CDS DNO_0394 NC_009446.1 438192 439496 R identified by match to protein family HMM PF01136; U32 family peptidase complement(438192..439496) Dichelobacter nodosus VCS1703A 5122326 YP_001209312.1 CDS luxS NC_009446.1 439603 440067 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 439603..440067 Dichelobacter nodosus VCS1703A 5123075 YP_001209313.1 CDS DNO_0396 NC_009446.1 440074 441360 R identified by match to protein family HMM PF00654; voltage-gated chloride channel protein complement(440074..441360) Dichelobacter nodosus VCS1703A 5122490 YP_001209314.1 CDS ubiA NC_009446.1 441367 442230 R identified by match to protein family HMM PF01040; 4-hydroxybenzoate polyprenyltransferase complement(441367..442230) Dichelobacter nodosus VCS1703A 5122986 YP_001209315.1 CDS DNO_0398 NC_009446.1 442447 444108 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 442447..444108 Dichelobacter nodosus VCS1703A 5122973 YP_001209316.1 CDS DNO_0399 NC_009446.1 444257 445102 D identified by match to protein family HMM PF03668; hypothetical protein 444257..445102 Dichelobacter nodosus VCS1703A 5123190 YP_001209317.1 CDS DNO_0400 NC_009446.1 445152 445688 R identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; hypothetical protein complement(445152..445688) Dichelobacter nodosus VCS1703A 5122506 YP_001209318.1 CDS DNO_0401 NC_009446.1 445688 445879 R lipoprotein complement(445688..445879) Dichelobacter nodosus VCS1703A 5122324 YP_001209319.1 CDS DNO_0402 NC_009446.1 445916 446629 R identified by match to protein family HMM PF02674; colicin V family protein CvpA complement(445916..446629) Dichelobacter nodosus VCS1703A 5123324 YP_001209320.1 CDS DNO_0403 NC_009446.1 446642 447247 R identified by match to protein family HMM PF05036; hypothetical protein complement(446642..447247) Dichelobacter nodosus VCS1703A 5123083 YP_001209321.1 CDS folC NC_009446.1 447253 448521 R identified by match to protein family HMM PF08245; match to protein family HMM TIGR01499; folylpolyglutamate synthase complement(447253..448521) Dichelobacter nodosus VCS1703A 5123339 YP_001209322.1 CDS accD NC_009446.1 448518 449543 R identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(448518..449543) Dichelobacter nodosus VCS1703A 5122551 YP_001209323.1 CDS DNO_0406 NC_009446.1 450314 450565 R hypothetical protein complement(450314..450565) Dichelobacter nodosus VCS1703A 5122255 YP_001209324.1 CDS DNO_0407 NC_009446.1 450577 450735 R identified by match to protein family HMM PF08085; lipoprotein complement(450577..450735) Dichelobacter nodosus VCS1703A 5122964 YP_001209325.1 CDS recD NC_009446.1 450954 452528 D exonuclease V, alpha subunit 450954..452528 Dichelobacter nodosus VCS1703A 5123427 YP_001209326.1 CDS DNO_0412 NC_009446.1 453413 454381 R identified by match to protein family HMM PF03773; hypothetical protein complement(453413..454381) Dichelobacter nodosus VCS1703A 5123308 YP_001209327.1 CDS DNO_0413 NC_009446.1 454391 454696 R identified by match to protein family HMM TIGR00412; redox-active disulfide protein family complement(454391..454696) Dichelobacter nodosus VCS1703A 5122996 YP_001209328.1 CDS apt NC_009446.1 454883 455407 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01090; adenine phosphoribosyltransferase complement(454883..455407) Dichelobacter nodosus VCS1703A 5123419 YP_001209329.1 CDS DNO_0415 NC_009446.1 455542 456300 D identified by match to protein family HMM PF01026; TatD family DNase 455542..456300 Dichelobacter nodosus VCS1703A 5123026 YP_001209330.1 CDS DNO_0416 NC_009446.1 456300 457004 D identified by match to protein family HMM PF00899; ThiF domain-containing protein 456300..457004 Dichelobacter nodosus VCS1703A 5122453 YP_001209331.1 CDS rpmE NC_009446.1 457088 457336 D identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 457088..457336 Dichelobacter nodosus VCS1703A 5122859 YP_001209332.1 CDS dsbD NC_009446.1 457660 459486 D identified by match to protein family HMM PF00085; match to protein family HMM PF02683; thiol:disulfide interchange protein DsbD 457660..459486 Dichelobacter nodosus VCS1703A 5122610 YP_001209333.1 CDS aroQ NC_009446.1 459636 460079 D identified by match to protein family HMM PF01220; match to protein family HMM TIGR01088; 3-dehydroquinate dehydratase 459636..460079 Dichelobacter nodosus VCS1703A 5123317 YP_001209334.1 CDS accB NC_009446.1 460104 460568 D identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 460104..460568 Dichelobacter nodosus VCS1703A 5123080 YP_001209335.1 CDS accC NC_009446.1 460579 461922 D identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 460579..461922 Dichelobacter nodosus VCS1703A 5122667 YP_001209336.1 CDS prmA NC_009446.1 461919 462803 D identified by match to protein family HMM PF06325; match to protein family HMM TIGR00406; 50S ribosomal protein L11 methyltransferase 461919..462803 Dichelobacter nodosus VCS1703A 5122301 YP_001209337.1 CDS DNO_0423 NC_009446.1 462804 463760 D identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase 462804..463760 Dichelobacter nodosus VCS1703A 5123046 YP_001209338.1 CDS DNO_0425 NC_009446.1 463783 464208 D identified by match to protein family HMM PF02643; hypothetical protein 463783..464208 Dichelobacter nodosus VCS1703A 5122862 YP_001209339.1 CDS DNO_0424 NC_009446.1 464201 465043 R hypothetical protein complement(464201..465043) Dichelobacter nodosus VCS1703A 5123236 YP_001209340.1 CDS DNO_0426 NC_009446.1 465055 466344 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein complement(465055..466344) Dichelobacter nodosus VCS1703A 5123139 YP_001209341.1 CDS DNO_0427 NC_009446.1 466361 467140 R identified by match to protein family HMM PF01578; hypothetical protein complement(466361..467140) Dichelobacter nodosus VCS1703A 5122135 YP_001209342.1 CDS ffh NC_009446.1 467236 468594 D identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 467236..468594 Dichelobacter nodosus VCS1703A 5122290 YP_001209343.1 CDS DNO_0429 NC_009446.1 468668 469996 R identified by match to protein family HMM PF00557; match to protein family HMM PF05195; xaa-pro aminopeptidase complement(468668..469996) Dichelobacter nodosus VCS1703A 5122195 YP_001209344.1 CDS DNO_0430 NC_009446.1 470154 470459 R hypothetical protein complement(470154..470459) Dichelobacter nodosus VCS1703A 5122861 YP_001209345.1 CDS xth-1 NC_009446.1 470548 471330 R identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III complement(470548..471330) Dichelobacter nodosus VCS1703A 5122412 YP_001209346.1 CDS DNO_0432 NC_009446.1 471389 471496 D hypothetical protein 471389..471496 Dichelobacter nodosus VCS1703A 5122143 YP_001209347.1 CDS DNO_0433 NC_009446.1 471489 472211 D identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; hypothetical protein 471489..472211 Dichelobacter nodosus VCS1703A 5122812 YP_001209348.1 CDS pilS NC_009446.1 472211 473956 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; two-componenent sensor PilS 472211..473956 Dichelobacter nodosus VCS1703A 5122747 YP_001209349.1 CDS pilR NC_009446.1 473960 475546 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; two-component response regulator PilR 473960..475546 Dichelobacter nodosus VCS1703A 5123067 YP_001209350.1 CDS murB NC_009446.1 475546 476538 D identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylenolpyruvoylglucosamine reductase 475546..476538 Dichelobacter nodosus VCS1703A 5122267 YP_001209351.1 CDS DNO_0437 NC_009446.1 476535 477194 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase-like hydrolase family protein 476535..477194 Dichelobacter nodosus VCS1703A 5122368 YP_001209352.1 CDS DNO_0438 NC_009446.1 477191 477538 D identified by match to protein family HMM PF06155; hypothetical protein 477191..477538 Dichelobacter nodosus VCS1703A 5122745 YP_001209353.1 CDS ubiE NC_009446.1 477541 478302 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01934; ubiquinone-menaquinone biosynthesis methyltransferase 477541..478302 Dichelobacter nodosus VCS1703A 5123248 YP_001209354.1 CDS DNO_0440 NC_009446.1 478316 478927 D identified by match to protein family HMM PF06843; hypothetical protein 478316..478927 Dichelobacter nodosus VCS1703A 5123204 YP_001209355.1 CDS ubiB NC_009446.1 478911 480491 D identified by match to protein family HMM PF03109; match to protein family HMM TIGR01982; 2-polyprenylphenol 6-hydroxylase 478911..480491 Dichelobacter nodosus VCS1703A 5122917 YP_001209356.1 CDS DNO_0442 NC_009446.1 480649 482046 D catalyzes the formation of phenol and pyruvate from tyrosine; tyrosine phenol-lyase 480649..482046 Dichelobacter nodosus VCS1703A 5123136 YP_001209357.1 CDS DNO_0443 NC_009446.1 482304 483944 R identified by match to protein family HMM PF00005; match to protein family HMM PF02463; ABC transporter complement(482304..483944) Dichelobacter nodosus VCS1703A 5123107 YP_001209358.1 CDS DNO_0444 NC_009446.1 484009 485763 R identified by match to protein family HMM PF00005; ABC transporter complement(484009..485763) Dichelobacter nodosus VCS1703A 5122379 YP_001209359.1 CDS DNO_0445 NC_009446.1 485766 486371 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(485766..486371) Dichelobacter nodosus VCS1703A 5122952 YP_001209360.1 CDS DNO_0446 NC_009446.1 488098 488385 D identified by match to protein family HMM PF00076; RNA recognition motif-containing protein 488098..488385 Dichelobacter nodosus VCS1703A 5122278 YP_001209361.1 CDS ackA NC_009446.1 488585 489769 D identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase 488585..489769 Dichelobacter nodosus VCS1703A 5123454 YP_001209362.1 CDS pta NC_009446.1 489780 491837 D identified by match to protein family HMM PF01515; match to protein family HMM PF07085; match to protein family HMM TIGR00651; phosphate acetyltransferase 489780..491837 Dichelobacter nodosus VCS1703A 5123124 YP_001209363.1 CDS DNO_0449 NC_009446.1 491952 492167 D identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; sec-independent protein translocase family protein TatA 491952..492167 Dichelobacter nodosus VCS1703A 5122788 YP_001209364.1 CDS DNO_0450 NC_009446.1 492170 492604 D identified by match to protein family HMM PF02416; match to protein family HMM TIGR01410; sec-independent protein translocase protein TatB 492170..492604 Dichelobacter nodosus VCS1703A 5123462 YP_001209365.1 CDS tatC NC_009446.1 492627 493343 D identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; sec-independent protein translocase TatC 492627..493343 Dichelobacter nodosus VCS1703A 5122622 YP_001209366.1 CDS DNO_0452 NC_009446.1 493370 494944 R identified by match to protein family HMM PF00496; oligopeptide transport protein complement(493370..494944) Dichelobacter nodosus VCS1703A 5122391 YP_001209367.1 CDS DNO_0453 NC_009446.1 494853 495077 R hypothetical protein complement(494853..495077) Dichelobacter nodosus VCS1703A 5122630 YP_001209368.1 CDS DNO_0454 NC_009446.1 495139 496077 D identified by match to protein family HMM PF00528; ABC transporter family protein 495139..496077 Dichelobacter nodosus VCS1703A 5123030 YP_001209369.1 CDS DNO_0455 NC_009446.1 496047 496925 D identified by match to protein family HMM PF00528; ABC transporter family protein 496047..496925 Dichelobacter nodosus VCS1703A 5122805 YP_001209370.1 CDS DNO_0456 NC_009446.1 496925 498514 D identified by match to protein family HMM PF00005; ABC transporter 496925..498514 Dichelobacter nodosus VCS1703A 5123196 YP_001209371.1 CDS holC NC_009446.1 498529 498954 D identified by match to protein family HMM PF04364; DNA polymerase III subunit chi 498529..498954 Dichelobacter nodosus VCS1703A 5123185 YP_001209372.1 CDS DNO_0458 NC_009446.1 498960 499490 R flavodoxin family protein complement(498960..499490) Dichelobacter nodosus VCS1703A 5123351 YP_001209373.1 CDS DNO_0460 NC_009446.1 500008 500613 R lipoprotein complement(500008..500613) Dichelobacter nodosus VCS1703A 5122547 YP_001209374.1 CDS DNO_0461 NC_009446.1 500864 501142 R hypothetical protein complement(500864..501142) Dichelobacter nodosus VCS1703A 5123352 YP_001209375.1 CDS DNO_0462 NC_009446.1 501199 502290 R lipoprotein complement(501199..502290) Dichelobacter nodosus VCS1703A 5123013 YP_001209376.1 CDS DNO_0464 NC_009446.1 502948 503649 D hypothetical protein 502948..503649 Dichelobacter nodosus VCS1703A 5123275 YP_001209377.1 CDS ispZ NC_009446.1 503658 504218 D identified by match to protein family HMM PF04279; intracellular septation protein A 503658..504218 Dichelobacter nodosus VCS1703A 5122770 YP_001209378.1 CDS DNO_0465 NC_009446.1 504209 504523 R hypothetical protein complement(504209..504523) Dichelobacter nodosus VCS1703A 5122799 YP_001209379.1 CDS DNO_0467 NC_009446.1 504547 504879 R identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein complement(504547..504879) Dichelobacter nodosus VCS1703A 5123081 YP_001209380.1 CDS fbp NC_009446.1 504944 505954 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(504944..505954) Dichelobacter nodosus VCS1703A 5122285 YP_001209381.1 CDS DNO_0469 NC_009446.1 506037 506510 R identified by match to protein family HMM PF01037; transcription regulator AsnC complement(506037..506510) Dichelobacter nodosus VCS1703A 5122793 YP_001209382.1 CDS nusB NC_009446.1 506691 507128 R identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB complement(506691..507128) Dichelobacter nodosus VCS1703A 5122200 YP_001209383.1 CDS ribH NC_009446.1 507125 507607 R identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114; 6,7-dimethyl-8-ribityllumazine synthase complement(507125..507607) Dichelobacter nodosus VCS1703A 5122874 YP_001209384.1 CDS ribB NC_009446.1 507669 508775 R identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(507669..508775) Dichelobacter nodosus VCS1703A 5123089 YP_001209385.1 CDS ribE NC_009446.1 508788 509432 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(508788..509432) Dichelobacter nodosus VCS1703A 5122766 YP_001209386.1 CDS ribD NC_009446.1 509447 510553 R identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD complement(509447..510553) Dichelobacter nodosus VCS1703A 5122998 YP_001209387.1 CDS nrdR NC_009446.1 510525 510992 R identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; hypothetical protein complement(510525..510992) Dichelobacter nodosus VCS1703A 5123002 YP_001209388.1 CDS glyA NC_009446.1 511008 512261 R identified by match to protein family HMM PF00464; serine hydroxymethyltransferase complement(511008..512261) Dichelobacter nodosus VCS1703A 5122420 YP_001209389.1 CDS scpA NC_009446.1 512440 513213 D identified by match to protein family HMM PF02616; hypothetical protein 512440..513213 Dichelobacter nodosus VCS1703A 5122261 YP_001209390.1 CDS DNO_0478 NC_009446.1 513210 513752 D identified by match to protein family HMM PF04079; hypothetical protein 513210..513752 Dichelobacter nodosus VCS1703A 5123453 YP_001209391.1 CDS rluB NC_009446.1 513736 514536 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase, RluB 513736..514536 Dichelobacter nodosus VCS1703A 5122707 YP_001209392.1 CDS lipA NC_009446.1 514640 515614 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 514640..515614 Dichelobacter nodosus VCS1703A 5122219 YP_001209393.1 CDS DNO_0481 NC_009446.1 515646 516359 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR00740; methyltransferase family protein 515646..516359 Dichelobacter nodosus VCS1703A 5122132 YP_001209394.1 CDS DNO_0482 NC_009446.1 516356 517294 D identified by match to protein family HMM PF08003; match to protein family HMM PF08242; methyltransferase family protein 516356..517294 Dichelobacter nodosus VCS1703A 5123194 YP_001209395.1 CDS ftsK NC_009446.1 517398 520109 D identified by match to protein family HMM PF01580; cell division protein, FtsK 517398..520109 Dichelobacter nodosus VCS1703A 5123318 YP_001209396.1 CDS DNO_0484 NC_009446.1 520123 520815 D identified by match to protein family HMM PF03548; LolA family outer membrane lipoprotein carrier protein 520123..520815 Dichelobacter nodosus VCS1703A 5123382 YP_001209397.1 CDS DNO_0485 NC_009446.1 520818 522107 D identified by match to protein family HMM PF00004; recombination factor protein RarA 520818..522107 Dichelobacter nodosus VCS1703A 5123153 YP_001209398.1 CDS rplU NC_009446.1 522182 522502 D identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 522182..522502 Dichelobacter nodosus VCS1703A 5123064 YP_001209399.1 CDS rpmA NC_009446.1 522515 522778 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 522515..522778 Dichelobacter nodosus VCS1703A 5122732 YP_001209400.1 CDS DNO_0488 NC_009446.1 522842 523903 D identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM TIGR02729; GTP binding domain-containing protein 522842..523903 Dichelobacter nodosus VCS1703A 5122675 YP_001209401.1 CDS DNO_0489 NC_009446.1 523924 524835 R identified by match to protein family HMM PF00288; GHMP kinase family protein complement(523924..524835) Dichelobacter nodosus VCS1703A 5123207 YP_001209402.1 CDS pyrB NC_009446.1 524911 525957 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase complement(524911..525957) Dichelobacter nodosus VCS1703A 5122760 YP_001209403.1 CDS dtd NC_009446.1 526175 526612 D identified by match to protein family HMM PF02580; match to protein family HMM TIGR00256; D-tyrosyl-tRNA deacylase 526175..526612 Dichelobacter nodosus VCS1703A 5122351 YP_001209404.1 CDS maf-1 NC_009446.1 526609 527232 D identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; Maf-like protein 526609..527232 Dichelobacter nodosus VCS1703A 5122386 YP_001209405.1 CDS rng NC_009446.1 527249 528739 D identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease g 527249..528739 Dichelobacter nodosus VCS1703A 5122148 YP_001209406.1 CDS DNO_0494 NC_009446.1 528896 530026 D identified by match to protein family HMM PF00267; porin family protein 528896..530026 Dichelobacter nodosus VCS1703A 5122211 YP_001209407.1 CDS DNO_0495 NC_009446.1 530286 531263 D identified by match to protein family HMM PF00267; match to protein family HMM TIGR03304; porin family protein 530286..531263 Dichelobacter nodosus VCS1703A 5122388 YP_001209408.1 CDS DNO_0496 NC_009446.1 531324 531890 R lipoprotein complement(531324..531890) Dichelobacter nodosus VCS1703A 5122584 YP_001209409.1 CDS DNO_0497 NC_009446.1 531893 533512 R identified by match to protein family HMM PF02470; paraquat-inducible B family protein complement(531893..533512) Dichelobacter nodosus VCS1703A 5122517 YP_001209410.1 CDS DNO_0499 NC_009446.1 534772 535437 R identified by match to protein family HMM PF01027; hypothetical protein complement(534772..535437) Dichelobacter nodosus VCS1703A 5123108 YP_001209411.1 CDS DNO_0500 NC_009446.1 535588 536544 D hypothetical protein 535588..536544 Dichelobacter nodosus VCS1703A 5122836 YP_001209412.1 CDS prfC NC_009446.1 536633 538228 D identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 536633..538228 Dichelobacter nodosus VCS1703A 5122306 YP_001209413.1 CDS DNO_0502 NC_009446.1 538366 539127 D identified by match to protein family HMM PF00497; extracellular solute-binding family protein 538366..539127 Dichelobacter nodosus VCS1703A 5122310 YP_001209414.1 CDS DNO_0503 NC_009446.1 539263 540021 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase family protein 539263..540021 Dichelobacter nodosus VCS1703A 5123268 YP_001209415.1 CDS DNO_0505 NC_009446.1 540031 541434 D identified by match to protein family HMM PF07690; drug resistance transporter 540031..541434 Dichelobacter nodosus VCS1703A 5122263 YP_001209416.1 CDS mvaD NC_009446.1 541361 542347 R identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR01240; diphosphomevalonate decarboxylase complement(541361..542347) Dichelobacter nodosus VCS1703A 5122627 YP_001209417.1 CDS fumC NC_009446.1 542356 543741 R identified by match to protein family HMM PF00206; match to protein family HMM TIGR00979; class II fumarate hydratase complement(542356..543741) Dichelobacter nodosus VCS1703A 5122826 YP_001209418.1 CDS dcd NC_009446.1 543789 544355 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(543789..544355) Dichelobacter nodosus VCS1703A 5123056 YP_001209419.1 CDS DNO_0508 NC_009446.1 544380 545417 R ATPase family protein complement(544380..545417) Dichelobacter nodosus VCS1703A 5122505 YP_001209420.1 CDS aroE NC_009446.1 545431 546213 R identified by match to protein family HMM PF01488; match to protein family HMM PF08501; shhikimate 5-dehydrogenase complement(545431..546213) Dichelobacter nodosus VCS1703A 5123181 YP_001209421.1 CDS hemB NC_009446.1 546210 547220 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(546210..547220) Dichelobacter nodosus VCS1703A 5122672 YP_001209422.1 CDS dsbA NC_009446.1 547347 547958 D identified by match to protein family HMM PF01323; thiol:disulfide interchange protein DsbA 547347..547958 Dichelobacter nodosus VCS1703A 5122625 YP_001209423.1 CDS DNO_0512 NC_009446.1 547958 548965 D identified by match to protein family HMM PF01636; hypothetical protein 547958..548965 Dichelobacter nodosus VCS1703A 5122521 YP_001209424.1 CDS DNO_0513 NC_009446.1 548931 549608 D identified by match to protein family HMM PF00483; match to protein family HMM PF01128; nucleotidyl transferase family protein 548931..549608 Dichelobacter nodosus VCS1703A 5123167 YP_001209425.1 CDS DNO_0514 NC_009446.1 549745 550839 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; hypothetical protein 549745..550839 Dichelobacter nodosus VCS1703A 5122636 YP_001209426.1 CDS DNO_0515 NC_009446.1 550931 551692 D identified by match to protein family HMM PF00515; type 4 fimbrial biogenesis protein 550931..551692 Dichelobacter nodosus VCS1703A 5122384 YP_001209427.1 CDS DNO_0516 NC_009446.1 551694 552674 D hypothetical protein 551694..552674 Dichelobacter nodosus VCS1703A 5122930 YP_001209428.1 CDS hisS NC_009446.1 552671 553951 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidyl-tRNA synthetase 552671..553951 Dichelobacter nodosus VCS1703A 5122510 YP_001209429.1 CDS DNO_0518 NC_009446.1 553942 554616 D hypothetical protein 553942..554616 Dichelobacter nodosus VCS1703A 5122613 YP_001209430.1 CDS DNO_0519 NC_009446.1 554613 555758 D quinonprotein alcohol dehydrogenase family protein 554613..555758 Dichelobacter nodosus VCS1703A 5122553 YP_001209431.1 CDS engA NC_009446.1 555768 557117 D identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; GTP-binding family protein 555768..557117 Dichelobacter nodosus VCS1703A 5122493 YP_001209432.1 CDS DNO_0521 NC_009446.1 557159 558382 R identified by match to protein family HMM PF05684; hypothetical protein complement(557159..558382) Dichelobacter nodosus VCS1703A 5123459 YP_001209433.1 CDS rpiA NC_009446.1 558488 559144 D identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase 558488..559144 Dichelobacter nodosus VCS1703A 5123220 YP_001209434.1 CDS DNO_0523 NC_009446.1 559147 559383 R identified by match to protein family HMM PF03937; hypothetical protein complement(559147..559383) Dichelobacter nodosus VCS1703A 5123128 YP_001209435.1 CDS rplT NC_009446.1 559452 559811 R identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; 50S ribosomal protein L20 complement(559452..559811) Dichelobacter nodosus VCS1703A 5123424 YP_001209436.1 CDS rpmI NC_009446.1 559823 560062 R identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 complement(559823..560062) Dichelobacter nodosus VCS1703A 5122776 YP_001209437.1 CDS thrS NC_009446.1 560604 562526 R identified by match to protein family HMM PF00587; match to protein family HMM PF02824; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonyl-tRNA synthetase complement(560604..562526) Dichelobacter nodosus VCS1703A 5122480 YP_001209438.1 CDS glmS NC_009446.1 562630 564447 D identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glucosamine-fructose-6-phosphate aminotransferase 562630..564447 Dichelobacter nodosus VCS1703A 5122366 YP_001209439.1 CDS DNO_0529 NC_009446.1 564498 565181 R hypothetical protein complement(564498..565181) Dichelobacter nodosus VCS1703A 5123006 YP_001209440.1 CDS DNO_0530 NC_009446.1 565171 566790 R identified by match to protein family HMM PF00884; match to protein family HMM PF08019; sulfatase complement(565171..566790) Dichelobacter nodosus VCS1703A 5122581 YP_001209441.1 CDS DNO_0531 NC_009446.1 567127 567891 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short-chain dehydrogenase/reductase family protein 567127..567891 Dichelobacter nodosus VCS1703A 5122827 YP_001209442.1 CDS rpoN NC_009446.1 567956 569365 R identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395; RNA polymerase sigma-54 factor complement(567956..569365) Dichelobacter nodosus VCS1703A 5123156 YP_001209443.1 CDS DNO_0533 NC_009446.1 569367 570098 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(569367..570098) Dichelobacter nodosus VCS1703A 5122899 YP_001209444.1 CDS DNO_0534 NC_009446.1 570095 570550 R identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002; OstA-like family protein complement(570095..570550) Dichelobacter nodosus VCS1703A 5122406 YP_001209445.1 CDS DNO_0535 NC_009446.1 570492 571064 R hypothetical protein complement(570492..571064) Dichelobacter nodosus VCS1703A 5122365 YP_001209446.1 CDS DNO_0536 NC_009446.1 571094 572056 R identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; arabinose 5-phosphate isomerase complement(571094..572056) Dichelobacter nodosus VCS1703A 5122206 YP_001209447.1 CDS gph NC_009446.1 572081 572755 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase complement(572081..572755) Dichelobacter nodosus VCS1703A 5122528 YP_001209448.1 CDS ubiG NC_009446.1 572752 573447 R identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01983; ubiquinone biosynthesis O-methyltransferase complement(572752..573447) Dichelobacter nodosus VCS1703A 5123444 YP_001209449.1 CDS DNO_0539 NC_009446.1 573502 574662 R hypothetical protein complement(573502..574662) Dichelobacter nodosus VCS1703A 5123391 YP_001209450.1 CDS rpe NC_009446.1 574740 575429 R identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase complement(574740..575429) Dichelobacter nodosus VCS1703A 5123433 YP_001209451.1 CDS birA NC_009446.1 575457 576203 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase 575457..576203 Dichelobacter nodosus VCS1703A 5122319 YP_001209452.1 CDS DNO_0542 NC_009446.1 576191 576931 D identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; bvg accessory factor family protein 576191..576931 Dichelobacter nodosus VCS1703A 5123359 YP_001209453.1 CDS DNO_0543 NC_009446.1 576935 578245 R identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease family protein complement(576935..578245) Dichelobacter nodosus VCS1703A 5123118 YP_001209454.1 CDS aceE NC_009446.1 578842 581490 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 578842..581490 Dichelobacter nodosus VCS1703A 5122363 YP_001209455.1 CDS aceF NC_009446.1 581471 582739 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 581471..582739 Dichelobacter nodosus VCS1703A 5122213 YP_001209456.1 CDS DNO_0546 NC_009446.1 582782 584467 D identified by match to protein family HMM PF02321; outer membrane efflux family protein 582782..584467 Dichelobacter nodosus VCS1703A 5123449 YP_001209457.1 CDS DNO_0547 NC_009446.1 584537 586753 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR03375; ABC transporter family protein 584537..586753 Dichelobacter nodosus VCS1703A 5122980 YP_001209458.1 CDS DNO_0549 NC_009446.1 586763 588028 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843; type I secretion membrane fusion protein 586763..588028 Dichelobacter nodosus VCS1703A 5122163 YP_001209459.1 CDS nth NC_009446.1 588014 588643 R identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III complement(588014..588643) Dichelobacter nodosus VCS1703A 5122729 YP_001209460.1 CDS rnfE NC_009446.1 588640 589281 R identified by match to protein family HMM PF02508; match to protein family HMM TIGR01948; electron transport complex protein subunit E complement(588640..589281) Dichelobacter nodosus VCS1703A 5123132 YP_001209461.1 CDS rnfG NC_009446.1 589271 589852 R identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; electron transport complex protein subunit G complement(589271..589852) Dichelobacter nodosus VCS1703A 5122554 YP_001209462.1 CDS rnfD NC_009446.1 589859 590812 R identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; electron transport complex protein subunit D complement(589859..590812) Dichelobacter nodosus VCS1703A 5123140 YP_001209463.1 CDS rnfC NC_009446.1 590809 592416 R identified by match to protein family HMM PF00037; match to protein family HMM PF01512; match to protein family HMM TIGR01945; electron transport complex protein subunit C complement(590809..592416) Dichelobacter nodosus VCS1703A 5122150 YP_001209464.1 CDS rnfB NC_009446.1 592403 592972 R identified by match to protein family HMM PF00037; match to protein family HMM PF04060; match to protein family HMM TIGR01944; electron transport complex protein subunit B complement(592403..592972) Dichelobacter nodosus VCS1703A 5122179 YP_001209465.1 CDS rnfA NC_009446.1 592969 593601 R identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; electron transport complex protein subunit A complement(592969..593601) Dichelobacter nodosus VCS1703A 5122740 YP_001209466.1 CDS DNO_0556 NC_009446.1 593673 594317 D lipoprotein 593673..594317 Dichelobacter nodosus VCS1703A 5123008 YP_001209467.1 CDS DNO_0557 NC_009446.1 594314 594778 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; alkyl hydroperoxide reductase/thiol specific antioxidant family protein 594314..594778 Dichelobacter nodosus VCS1703A 5123159 YP_001209468.1 CDS uvrB NC_009446.1 594794 596803 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 594794..596803 Dichelobacter nodosus VCS1703A 5123053 YP_001209469.1 CDS DNO_0559 NC_009446.1 596834 598687 D identified by match to protein family HMM PF01501; glycosyl transferase family protein 596834..598687 Dichelobacter nodosus VCS1703A 5122287 YP_001209470.1 CDS DNO_0560 NC_009446.1 598691 599194 R hypothetical protein complement(598691..599194) Dichelobacter nodosus VCS1703A 5122695 YP_001209471.1 CDS dapB NC_009446.1 599224 600048 D identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 599224..600048 Dichelobacter nodosus VCS1703A 5123034 YP_001209472.1 CDS DNO_0562 NC_009446.1 600118 600474 D hypothetical protein 600118..600474 Dichelobacter nodosus VCS1703A 5122238 YP_001209473.1 CDS DNO_0563 NC_009446.1 600475 601620 D tetratricopeptide repeat protein 600475..601620 Dichelobacter nodosus VCS1703A 5122545 YP_001209474.1 CDS pyrF NC_009446.1 601617 602306 D identified by match to protein family HMM PF00215; match to protein family HMM TIGR01740; orotidine 5'-phosphate decarboxylase 601617..602306 Dichelobacter nodosus VCS1703A 5123098 YP_001209475.1 CDS pssA NC_009446.1 602316 603053 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 602316..603053 Dichelobacter nodosus VCS1703A 5122984 YP_001209476.1 CDS DNO_0566 NC_009446.1 603046 603726 D hypothetical protein 603046..603726 Dichelobacter nodosus VCS1703A 5122158 YP_001209477.1 CDS DNO_0567 NC_009446.1 603728 604396 D identified by match to protein family HMM PF08239; hypothetical protein 603728..604396 Dichelobacter nodosus VCS1703A 5123372 YP_001209478.1 CDS lgt NC_009446.1 604430 605218 D identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 604430..605218 Dichelobacter nodosus VCS1703A 5122807 YP_001209479.1 CDS thyA NC_009446.1 605226 606002 D identified by match to protein family HMM PF00303; thymidylate synthase 605226..606002 Dichelobacter nodosus VCS1703A 5122897 YP_001209480.1 CDS DNO_0570 NC_009446.1 606019 608394 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02071; penicillin-binding protein 1B 606019..608394 Dichelobacter nodosus VCS1703A 5122313 YP_001209481.1 CDS DNO_0571 NC_009446.1 608477 609364 D identified by match to protein family HMM PF00515; hypothetical protein 608477..609364 Dichelobacter nodosus VCS1703A 5122325 YP_001209482.1 CDS DNO_0572 NC_009446.1 609374 611311 D helicase domain-containing protein 609374..611311 Dichelobacter nodosus VCS1703A 5122631 YP_001209483.1 CDS DNO_0573 NC_009446.1 611298 611957 D identified by match to protein family HMM PF00814; glycoprotease family protein 611298..611957 Dichelobacter nodosus VCS1703A 5122502 YP_001209484.1 CDS DNO_0574 NC_009446.1 611954 612355 D thioesterase family protein 611954..612355 Dichelobacter nodosus VCS1703A 5123000 YP_001209485.1 CDS DNO_0575 NC_009446.1 612359 613843 D identified by match to protein family HMM PF01926; hypothetical protein 612359..613843 Dichelobacter nodosus VCS1703A 5122207 YP_001209486.1 CDS DNO_0576 NC_009446.1 613737 615125 D identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; hypothetical protein 613737..615125 Dichelobacter nodosus VCS1703A 5123322 YP_001209487.1 CDS tldD NC_009446.1 615118 616542 D identified by match to protein family HMM PF01523; TldD protein 615118..616542 Dichelobacter nodosus VCS1703A 5122236 YP_001209488.1 CDS DNO_0578 NC_009446.1 616535 617878 D identified by match to protein family HMM PF01523; PmbA protein 616535..617878 Dichelobacter nodosus VCS1703A 5123029 YP_001209489.1 CDS tadA NC_009446.1 617871 618344 D identified by match to protein family HMM PF00383; adenosine deaminase 617871..618344 Dichelobacter nodosus VCS1703A 5122482 YP_001209490.1 CDS DNO_0580 NC_009446.1 618337 618708 D putative lipoprotein 618337..618708 Dichelobacter nodosus VCS1703A 5122316 YP_001209491.1 CDS DNO_0581 NC_009446.1 618719 620428 D identified by match to protein family HMM PF02254; TrkA domain-containing protein 618719..620428 Dichelobacter nodosus VCS1703A 5122171 YP_001209492.1 CDS DNO_0582 NC_009446.1 620439 621188 D identified by match to protein family HMM PF00561; hydrolase 620439..621188 Dichelobacter nodosus VCS1703A 5123311 YP_001209493.1 CDS DNO_0583 NC_009446.1 621204 622151 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; 1-phosphofructokinase 621204..622151 Dichelobacter nodosus VCS1703A 5123393 YP_001209494.1 CDS rluE NC_009446.1 622151 622720 D identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase, RluE 622151..622720 Dichelobacter nodosus VCS1703A 5123187 YP_001209495.1 CDS trpC NC_009446.1 622906 623709 D identified by match to protein family HMM PF00218; indole-3-glycerol phosphate synthase 622906..623709 Dichelobacter nodosus VCS1703A 5122413 YP_001209496.1 CDS upp NC_009446.1 623711 624343 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 623711..624343 Dichelobacter nodosus VCS1703A 5122756 YP_001209497.1 CDS DNO_0587 NC_009446.1 624330 625028 D hypothetical protein 624330..625028 Dichelobacter nodosus VCS1703A 5122400 YP_001209498.1 CDS DNO_0588 NC_009446.1 625025 625954 D hypothetical protein 625025..625954 Dichelobacter nodosus VCS1703A 5122538 YP_001209499.1 CDS DNO_0589 NC_009446.1 626025 627377 D hypothetical protein 626025..627377 Dichelobacter nodosus VCS1703A 5123223 YP_001209500.1 CDS kamA NC_009446.1 627425 628339 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238; lysine 2,3-aminomutase 627425..628339 Dichelobacter nodosus VCS1703A 5122457 YP_001209501.1 CDS recJ NC_009446.1 628336 630006 D identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; DNA exonuclease RecJ 628336..630006 Dichelobacter nodosus VCS1703A 5123452 YP_001209502.1 CDS DNO_0591 NC_009446.1 630003 630212 R hypothetical protein complement(630003..630212) Dichelobacter nodosus VCS1703A 5122558 YP_001209503.1 CDS DNO_0593 NC_009446.1 630212 631027 R identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; haloacid dehalogenase family protein complement(630212..631027) Dichelobacter nodosus VCS1703A 5123461 YP_001209504.1 CDS DNO_0594 NC_009446.1 631011 631262 R hypothetical protein complement(631011..631262) Dichelobacter nodosus VCS1703A 5122821 YP_001209505.1 CDS hfq NC_009446.1 631250 631570 D identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383; Hfq RNA-binding protein 631250..631570 Dichelobacter nodosus VCS1703A 5123325 YP_001209506.1 CDS hflX NC_009446.1 631650 632936 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR03156; GTP-binding protein HflX 631650..632936 Dichelobacter nodosus VCS1703A 5123133 YP_001209507.1 CDS hflK NC_009446.1 632956 634233 D identified by match to protein family HMM PF01145; match to protein family HMM TIGR01933; HflK protein 632956..634233 Dichelobacter nodosus VCS1703A 5122431 YP_001209508.1 CDS hflC NC_009446.1 634236 635174 D identified by match to protein family HMM PF01145; match to protein family HMM TIGR01932; HflC protein 634236..635174 Dichelobacter nodosus VCS1703A 5123436 YP_001209509.1 CDS DNO_0599 NC_009446.1 635182 635394 D hypothetical protein 635182..635394 Dichelobacter nodosus VCS1703A 5122193 YP_001209510.1 CDS purA NC_009446.1 635412 636698 D identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184; adenylosuccinate synthetase 635412..636698 Dichelobacter nodosus VCS1703A 5123183 YP_001209511.1 CDS DNO_0601 NC_009446.1 636742 639000 D identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 636742..639000 Dichelobacter nodosus VCS1703A 5123171 YP_001209512.1 CDS trmH NC_009446.1 638997 639725 D identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase 638997..639725 Dichelobacter nodosus VCS1703A 5123289 YP_001209513.1 CDS aprV5 NC_009446.1 639978 641765 D identified by match to protein family HMM PF00082; match to protein family HMM PF01483; acidic extracellular subtilisin-like protease AprV5 639978..641765 Dichelobacter nodosus VCS1703A 5122149 YP_001209514.1 CDS DNO_0604 NC_009446.1 641844 642755 D identified by match to protein family HMM PF00152; lysyl-RNA synthetase 641844..642755 Dichelobacter nodosus VCS1703A 5122918 YP_001209515.1 CDS bprV NC_009446.1 642978 644789 D identified by match to protein family HMM PF00082; match to protein family HMM PF01483; basic extracellular subtilisin-like protease BprV 642978..644789 Dichelobacter nodosus VCS1703A 5123334 YP_001209516.1 CDS DNO_0606 NC_009446.1 645027 645761 D identified by match to protein family HMM PF00497; extracellular solute-binding family protein 645027..645761 Dichelobacter nodosus VCS1703A 5123010 YP_001209517.1 CDS nrdA NC_009446.1 645819 647540 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(645819..647540) Dichelobacter nodosus VCS1703A 5123059 YP_001209518.1 CDS DNO_0608 NC_009446.1 647467 648444 R identified by match to protein family HMM PF00268; ribonucleotide reductase subunit beta complement(647467..648444) Dichelobacter nodosus VCS1703A 5123367 YP_001209519.1 CDS DNO_0609 NC_009446.1 648605 651988 R identified by match to protein family HMM PF02463; chromosome segregation SMC family protein complement(648605..651988) Dichelobacter nodosus VCS1703A 5122202 YP_001209520.1 CDS DNO_0610 NC_009446.1 652129 653973 D identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR01427; PTS system, fructose IIC subunit 652129..653973 Dichelobacter nodosus VCS1703A 5123314 YP_001209521.1 CDS aroK NC_009446.1 653989 654525 D identified by match to protein family HMM PF01202; shikimate kinase I 653989..654525 Dichelobacter nodosus VCS1703A 5122275 YP_001209522.1 CDS gyrB NC_009446.1 654560 656962 R identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B complement(654560..656962) Dichelobacter nodosus VCS1703A 5122810 YP_001209523.1 CDS yfiA NC_009446.1 657445 657735 D identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; sigma-54 modulation protein/S30EA ribosomal family protein 657445..657735 Dichelobacter nodosus VCS1703A 5122269 YP_001209524.1 CDS DNO_0615 NC_009446.1 657873 658109 D lipoprotein 657873..658109 Dichelobacter nodosus VCS1703A 5123178 YP_001209525.1 CDS DNO_0616 NC_009446.1 658111 658548 D hypothetical protein 658111..658548 Dichelobacter nodosus VCS1703A 5123295 YP_001209526.1 CDS DNO_0617 NC_009446.1 658568 659080 D hypothetical protein 658568..659080 Dichelobacter nodosus VCS1703A 5123042 YP_001209527.1 CDS ndh NC_009446.1 659243 660520 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; NADH dehydrogenase 659243..660520 Dichelobacter nodosus VCS1703A 5122338 YP_001209528.1 CDS sdaA NC_009446.1 660877 662247 D identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine dehydratase 660877..662247 Dichelobacter nodosus VCS1703A 5122235 YP_001209529.1 CDS DNO_0620 NC_009446.1 662341 662532 D hypothetical protein 662341..662532 Dichelobacter nodosus VCS1703A 5122725 YP_001209530.1 CDS DNO_0621 NC_009446.1 662544 662711 D hypothetical protein 662544..662711 Dichelobacter nodosus VCS1703A 5122461 YP_001209531.1 CDS hrpA NC_009446.1 662704 666612 D identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA 662704..666612 Dichelobacter nodosus VCS1703A 5122954 YP_001209532.1 CDS DNO_0623 NC_009446.1 666609 666794 D lipoprotein 666609..666794 Dichelobacter nodosus VCS1703A 5122926 YP_001209533.1 CDS pfs NC_009446.1 666804 667493 D identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA-SAH nucleosidase 666804..667493 Dichelobacter nodosus VCS1703A 5122872 YP_001209534.1 CDS mdoG NC_009446.1 667619 669169 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 667619..669169 Dichelobacter nodosus VCS1703A 5123471 YP_001209535.1 CDS mdoH NC_009446.1 669142 671259 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 669142..671259 Dichelobacter nodosus VCS1703A 5122617 YP_001209536.1 CDS trmU NC_009446.1 671285 672415 D identified by match to protein family HMM PF01171; match to protein family HMM PF03054; match to protein family HMM TIGR00420; tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase 671285..672415 Dichelobacter nodosus VCS1703A 5122831 YP_001209537.1 CDS DNO_0629 NC_009446.1 672402 673013 D HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 672402..673013 Dichelobacter nodosus VCS1703A 5123007 YP_001209538.1 CDS DNO_0628 NC_009446.1 673010 673825 R identified by match to protein family HMM PF03618; hypothetical protein complement(673010..673825) Dichelobacter nodosus VCS1703A 5122374 YP_001209539.1 CDS ppsA NC_009446.1 674079 676463 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 674079..676463 Dichelobacter nodosus VCS1703A 5123294 YP_001209540.1 CDS ung NC_009446.1 676520 677209 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase complement(676520..677209) Dichelobacter nodosus VCS1703A 5122185 YP_001209541.1 CDS DNO_0632 NC_009446.1 677212 677610 R putative lipoprotein complement(677212..677610) Dichelobacter nodosus VCS1703A 5123356 YP_001209542.1 CDS DNO_0633 NC_009446.1 677580 679445 R identified by match to protein family HMM PF01464; lytic murein transglycosylase complement(677580..679445) Dichelobacter nodosus VCS1703A 5122486 YP_001209543.1 CDS DNO_0634 NC_009446.1 679461 680159 R identified by match to protein family HMM PF01464; transglycosylase complement(679461..680159) Dichelobacter nodosus VCS1703A 5123093 YP_001209544.1 CDS DNO_0635 NC_009446.1 680156 681709 R identified by match to protein family HMM PF01464; transglycosylase complement(680156..681709) Dichelobacter nodosus VCS1703A 5122978 YP_001209545.1 CDS DNO_0636 NC_009446.1 681706 682596 R hypothetical protein complement(681706..682596) Dichelobacter nodosus VCS1703A 5123197 YP_001209546.1 CDS telA NC_009446.1 682608 683705 R identified by match to protein family HMM PF05816; toxic anion resistance protein complement(682608..683705) Dichelobacter nodosus VCS1703A 5122452 YP_001209547.1 CDS DNO_0638 NC_009446.1 683695 684564 R hypothetical protein complement(683695..684564) Dichelobacter nodosus VCS1703A 5122475 YP_001209548.1 CDS DNO_0639 NC_009446.1 684786 685166 R identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein complement(684786..685166) Dichelobacter nodosus VCS1703A 5122854 YP_001209549.1 CDS DNO_0641 NC_009446.1 685165 686007 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 685165..686007 Dichelobacter nodosus VCS1703A 5123191 YP_001209550.1 CDS yfeD NC_009446.1 685989 686801 R identified by match to protein family HMM PF00950; ABC iron transporter permease YfeD complement(685989..686801) Dichelobacter nodosus VCS1703A 5122304 YP_001209551.1 CDS yfeC NC_009446.1 686816 687646 R identified by match to protein family HMM PF00950; ABC iron transporter YfeC complement(686816..687646) Dichelobacter nodosus VCS1703A 5122348 YP_001209552.1 CDS yfeB NC_009446.1 687643 688488 R identified by match to protein family HMM PF00005; ABC iron transporter ATP-binding protein YfeB complement(687643..688488) Dichelobacter nodosus VCS1703A 5122919 YP_001209553.1 CDS yfeA NC_009446.1 688490 689392 R identified by match to protein family HMM PF01297; periplasmic iron-binding protein YfeA complement(688490..689392) Dichelobacter nodosus VCS1703A 5123282 YP_001209554.1 CDS DNO_0645 NC_009446.1 689561 690181 D identified by match to protein family HMM PF00625; guanylate kinase 689561..690181 Dichelobacter nodosus VCS1703A 5123048 YP_001209555.1 CDS DNO_0646 NC_009446.1 690224 692062 R identified by match to protein family HMM PF00425; match to protein family HMM PF01063; chorismate binding family protein complement(690224..692062) Dichelobacter nodosus VCS1703A 5123252 YP_001209556.1 CDS mutY NC_009446.1 692067 693110 R identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A-G-specific adenine glycosylase complement(692067..693110) Dichelobacter nodosus VCS1703A 5122635 YP_001209557.1 CDS ispA NC_009446.1 693136 693978 R identified by match to protein family HMM PF00348; geranyltranstransferase complement(693136..693978) Dichelobacter nodosus VCS1703A 5122990 YP_001209558.1 CDS DNO_0649 NC_009446.1 694003 694953 R identified by match to protein family HMM PF03193; match to protein family HMM TIGR00157; hypothetical protein complement(694003..694953) Dichelobacter nodosus VCS1703A 5122932 YP_001209559.1 CDS DNO_0650 NC_009446.1 694960 695712 R identified by match to protein family HMM PF04333; VacJ-like lipoprotein complement(694960..695712) Dichelobacter nodosus VCS1703A 5122478 YP_001209560.1 CDS DNO_0651 NC_009446.1 695771 696832 R identified by match to protein family HMM PF01594; hypothetical protein complement(695771..696832) Dichelobacter nodosus VCS1703A 5122126 YP_001209561.1 CDS DNO_0652 NC_009446.1 696967 697869 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 696967..697869 Dichelobacter nodosus VCS1703A 5122693 YP_001209562.1 CDS DNO_0653 NC_009446.1 697923 698648 R identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase complement(697923..698648) Dichelobacter nodosus VCS1703A 5122247 YP_001209563.1 CDS DNO_0654 NC_009446.1 698853 700343 D identified by match to protein family HMM PF03553; Na+-H+ antiporter family protein 698853..700343 Dichelobacter nodosus VCS1703A 5122299 YP_001209564.1 CDS clpA NC_009446.1 700386 702677 R identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease ATP-binding subunit ClpA complement(700386..702677) Dichelobacter nodosus VCS1703A 5122669 YP_001209565.1 CDS clpS NC_009446.1 702690 703004 R identified by match to protein family HMM PF02617; ATP-dependent Clp protease adaptor protein ClpS complement(702690..703004) Dichelobacter nodosus VCS1703A 5122474 YP_001209566.1 CDS pyrC NC_009446.1 703250 704287 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 703250..704287 Dichelobacter nodosus VCS1703A 5122566 YP_001209567.1 CDS DNO_0658 NC_009446.1 704334 704951 D identified by match to protein family HMM PF00293; NUDIX domain-containing protein 704334..704951 Dichelobacter nodosus VCS1703A 5122633 YP_001209568.1 CDS DNO_0659 NC_009446.1 704973 705872 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 704973..705872 Dichelobacter nodosus VCS1703A 5123170 YP_001209569.1 CDS DNO_0660 NC_009446.1 705935 706339 D hypothetical protein 705935..706339 Dichelobacter nodosus VCS1703A 5122939 YP_001209570.1 CDS DNO_0661 NC_009446.1 706400 707206 D identified by match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM PF08242; S-adenosylmethionine-dependent methyltransferase 706400..707206 Dichelobacter nodosus VCS1703A 5123458 YP_001209571.1 CDS DNO_0662 NC_009446.1 707241 708455 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; xanthine/uracil permease family protein 707241..708455 Dichelobacter nodosus VCS1703A 5123270 YP_001209572.1 CDS rdgB NC_009446.1 708512 709102 R identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; Ham1-like protein complement(708512..709102) Dichelobacter nodosus VCS1703A 5122848 YP_001209573.1 CDS rph NC_009446.1 709105 709821 R identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966; ribonuclease PH complement(709105..709821) Dichelobacter nodosus VCS1703A 5123401 YP_001209574.1 CDS DNO_0665 NC_009446.1 709894 710754 D identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein 709894..710754 Dichelobacter nodosus VCS1703A 5123420 YP_001209575.1 CDS dsbB NC_009446.1 710818 711327 R identified by match to protein family HMM PF02600; thiol:disulfide interchange protein DsbB complement(710818..711327) Dichelobacter nodosus VCS1703A 5122334 YP_001209576.1 CDS purB NC_009446.1 711355 712728 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(711355..712728) Dichelobacter nodosus VCS1703A 5123123 YP_001209577.1 CDS pgpA NC_009446.1 712738 713241 R identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A complement(712738..713241) Dichelobacter nodosus VCS1703A 5122778 YP_001209578.1 CDS pyrD NC_009446.1 713246 714259 R identified by match to protein family HMM PF01180; match to protein family HMM TIGR01036; dihydroorotate dehydrogenase complement(713246..714259) Dichelobacter nodosus VCS1703A 5123346 YP_001209579.1 CDS DNO_0670 NC_009446.1 714284 715360 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(714284..715360) Dichelobacter nodosus VCS1703A 5122979 YP_001209580.1 CDS DNO_0671 NC_009446.1 715365 715562 R hypothetical protein complement(715365..715562) Dichelobacter nodosus VCS1703A 5122242 YP_001209581.1 CDS gidA NC_009446.1 715559 717457 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(715559..717457) Dichelobacter nodosus VCS1703A 5122940 YP_001209582.1 CDS DNO_0673 NC_009446.1 717482 718000 R identified by match to protein family HMM PF02325; hypothetical protein complement(717482..718000) Dichelobacter nodosus VCS1703A 5122601 YP_001209583.1 CDS proC NC_009446.1 718000 718857 R identified by match to protein family HMM PF01408; match to protein family HMM PF03807; match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase complement(718000..718857) Dichelobacter nodosus VCS1703A 5122889 YP_001209584.1 CDS pilT NC_009446.1 718972 720045 D identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein PilT 718972..720045 Dichelobacter nodosus VCS1703A 5123386 YP_001209585.1 CDS pilU NC_009446.1 720058 721278 D identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein PilU 720058..721278 Dichelobacter nodosus VCS1703A 5122594 YP_001209586.1 CDS parE NC_009446.1 721284 723191 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 721284..723191 Dichelobacter nodosus VCS1703A 5122870 YP_001209587.1 CDS parC NC_009446.1 723201 725420 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 723201..725420 Dichelobacter nodosus VCS1703A 5122462 YP_001209588.1 CDS DNO_0679 NC_009446.1 725420 727186 D identified by match to protein family HMM PF00755; choline-carnitine o-acyltransferase family protein 725420..727186 Dichelobacter nodosus VCS1703A 5122382 YP_001209589.1 CDS aat NC_009446.1 727194 727874 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(727194..727874) Dichelobacter nodosus VCS1703A 5123228 YP_001209590.1 CDS DNO_0681 NC_009446.1 727995 730295 D identified by match to protein family HMM PF01103; match to protein family HMM PF07244; outer membrane protein 727995..730295 Dichelobacter nodosus VCS1703A 5123208 YP_001209591.1 CDS DNO_0682 NC_009446.1 730303 730917 D identified by match to protein family HMM PF03938; OmpH family protein 730303..730917 Dichelobacter nodosus VCS1703A 5122153 YP_001209592.1 CDS lpxD NC_009446.1 730898 731893 D identified by match to protein family HMM PF00132; match to protein family HMM PF04613; match to protein family HMM TIGR01853; UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase 730898..731893 Dichelobacter nodosus VCS1703A 5122354 YP_001209593.1 CDS fabZ NC_009446.1 731890 732387 D identified by match to protein family HMM PF07977; match to protein family HMM TIGR01750; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 731890..732387 Dichelobacter nodosus VCS1703A 5123338 YP_001209594.1 CDS lpxA NC_009446.1 732387 733160 D identified by match to protein family HMM PF00132; match to protein family HMM TIGR01852; acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase 732387..733160 Dichelobacter nodosus VCS1703A 5123237 YP_001209595.1 CDS lpxB NC_009446.1 733167 734324 D identified by match to protein family HMM PF02684; match to protein family HMM TIGR00215; lipid-A-disaccharide synthase 733167..734324 Dichelobacter nodosus VCS1703A 5122194 YP_001209596.1 CDS rnhB NC_009446.1 734321 734890 D identified by match to protein family HMM PF01351; ribonuclease HII 734321..734890 Dichelobacter nodosus VCS1703A 5123411 YP_001209597.1 CDS dnaE NC_009446.1 734925 738452 D identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 734925..738452 Dichelobacter nodosus VCS1703A 5123286 YP_001209598.1 CDS mfd NC_009446.1 738458 741811 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(738458..741811) Dichelobacter nodosus VCS1703A 5122146 YP_001209599.1 CDS DNO_0690 NC_009446.1 741913 745275 R hypothetical protein complement(741913..745275) Dichelobacter nodosus VCS1703A 5122801 YP_001209600.1 CDS era NC_009446.1 745734 746633 R identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; match to protein family HMM TIGR00650; GTP-binding protein Era complement(745734..746633) Dichelobacter nodosus VCS1703A 5122987 YP_001209601.1 CDS rnc NC_009446.1 746630 747331 R identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III complement(746630..747331) Dichelobacter nodosus VCS1703A 5122434 YP_001209602.1 CDS lepB NC_009446.1 747331 748302 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(747331..748302) Dichelobacter nodosus VCS1703A 5122945 YP_001209603.1 CDS lepA NC_009446.1 748315 750117 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(748315..750117) Dichelobacter nodosus VCS1703A 5122991 YP_001209604.1 CDS DNO_0695 NC_009446.1 750343 751140 D identified by match to protein family HMM PF07670; hypothetical protein 750343..751140 Dichelobacter nodosus VCS1703A 5122541 YP_001209605.1 CDS DNO_0696 NC_009446.1 751142 751600 D identified by match to protein family HMM PF07670; hypothetical protein 751142..751600 Dichelobacter nodosus VCS1703A 5122321 YP_001209606.1 CDS DNO_0697 NC_009446.1 751611 752738 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; M20 family peptidase 751611..752738 Dichelobacter nodosus VCS1703A 5122708 YP_001209607.1 CDS DNO_0698 NC_009446.1 752830 754590 D identified by match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate transporter family protein 752830..754590 Dichelobacter nodosus VCS1703A 5122650 YP_001209608.1 CDS DNO_0700 NC_009446.1 754651 755115 D lipoprotein 754651..755115 Dichelobacter nodosus VCS1703A 5123432 YP_001209609.1 CDS deoD NC_009446.1 755112 755825 R identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107; purine nucleoside phosphorylase complement(755112..755825) Dichelobacter nodosus VCS1703A 5123016 YP_001209610.1 CDS glyQ NC_009446.1 755942 756841 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 755942..756841 Dichelobacter nodosus VCS1703A 5122684 YP_001209611.1 CDS glyS NC_009446.1 756838 758907 D identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211; glycyl-tRNA synthetase subunit beta 756838..758907 Dichelobacter nodosus VCS1703A 5123174 YP_001209612.1 CDS DNO_0703 NC_009446.1 759026 759505 D identified by match to protein family HMM PF03610; PTS system, fructose IIA component 759026..759505 Dichelobacter nodosus VCS1703A 5123385 YP_001209613.1 CDS DNO_0704 NC_009446.1 759492 759956 D identified by match to protein family HMM PF04074; match to protein family HMM TIGR00022; hypothetical protein 759492..759956 Dichelobacter nodosus VCS1703A 5123373 YP_001209614.1 CDS DNO_0705 NC_009446.1 759975 760868 D identified by match to protein family HMM PF00480; ROK family protein 759975..760868 Dichelobacter nodosus VCS1703A 5122804 YP_001209615.1 CDS DNO_0706 NC_009446.1 760865 761605 D identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; phosphoglycerate mutase 760865..761605 Dichelobacter nodosus VCS1703A 5122710 YP_001209616.1 CDS zur NC_009446.1 761783 762232 D identified by match to protein family HMM PF01475; zinc uptake regulation protein 761783..762232 Dichelobacter nodosus VCS1703A 5123278 YP_001209617.1 CDS DNO_0708 NC_009446.1 762240 762719 D identified by match to protein family HMM PF00588; rRNA methyltransferase 762240..762719 Dichelobacter nodosus VCS1703A 5122572 YP_001209618.1 CDS menA NC_009446.1 762730 763617 D identified by match to protein family HMM PF01040; match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 762730..763617 Dichelobacter nodosus VCS1703A 5122175 YP_001209619.1 CDS DNO_0711 NC_009446.1 763815 765128 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 763815..765128 Dichelobacter nodosus VCS1703A 5123233 YP_001209620.1 CDS fimV NC_009446.1 765921 768800 R type IV fimbrial biogenesis protein FimV complement(765921..768800) Dichelobacter nodosus VCS1703A 5122444 YP_001209621.1 CDS DNO_0714 NC_009446.1 769073 769756 D identified by match to protein family HMM PF02230; phospholipase/carboxylesterase family protein 769073..769756 Dichelobacter nodosus VCS1703A 5122507 YP_001209622.1 CDS DNO_0713 NC_009446.1 769745 770068 R hypothetical protein complement(769745..770068) Dichelobacter nodosus VCS1703A 5122550 YP_001209623.1 CDS DNO_0715 NC_009446.1 770065 770451 R hypothetical protein complement(770065..770451) Dichelobacter nodosus VCS1703A 5123327 YP_001209624.1 CDS DNO_0717 NC_009446.1 770476 771045 D hypothetical protein 770476..771045 Dichelobacter nodosus VCS1703A 5123148 YP_001209625.1 CDS DNO_0716 NC_009446.1 771037 772482 R identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; M50 family zinc metalloprotease complement(771037..772482) Dichelobacter nodosus VCS1703A 5122753 YP_001209626.1 CDS cdsA NC_009446.1 772443 773276 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(772443..773276) Dichelobacter nodosus VCS1703A 5122755 YP_001209627.1 CDS uppS NC_009446.1 773276 774019 R identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase complement(773276..774019) Dichelobacter nodosus VCS1703A 5122644 YP_001209628.1 CDS frr NC_009446.1 774020 774577 R identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor complement(774020..774577) Dichelobacter nodosus VCS1703A 5122623 YP_001209629.1 CDS pyrH NC_009446.1 774587 775312 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; uridylate kinase complement(774587..775312) Dichelobacter nodosus VCS1703A 5122914 YP_001209630.1 CDS tsf NC_009446.1 775472 776353 R identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; elongation factor Ts complement(775472..776353) Dichelobacter nodosus VCS1703A 5122162 YP_001209631.1 CDS rpsB NC_009446.1 776365 777168 R identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 complement(776365..777168) Dichelobacter nodosus VCS1703A 5122246 YP_001209632.1 CDS map NC_009446.1 777377 778168 D identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 777377..778168 Dichelobacter nodosus VCS1703A 5122556 YP_001209633.1 CDS DNO_0725 NC_009446.1 778217 778909 R adhesin complex protein complement(778217..778909) Dichelobacter nodosus VCS1703A 5122257 YP_001209634.1 CDS DNO_0726 NC_009446.1 779091 779273 D hypothetical protein 779091..779273 Dichelobacter nodosus VCS1703A 5123304 YP_001209635.1 CDS DNO_0727 NC_009446.1 779270 780058 D identified by match to protein family HMM PF01026; TatD family deoxyribonuclease 779270..780058 Dichelobacter nodosus VCS1703A 5123032 YP_001209636.1 CDS DNO_0728 NC_009446.1 780107 781411 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein 780107..781411 Dichelobacter nodosus VCS1703A 5122496 YP_001209637.1 CDS DNO_0729 NC_009446.1 781452 782009 R hypothetical protein complement(781452..782009) Dichelobacter nodosus VCS1703A 5123410 YP_001209638.1 CDS DNO_0730 NC_009446.1 782048 783955 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(782048..783955) Dichelobacter nodosus VCS1703A 5122677 YP_001209639.1 CDS gltX NC_009446.1 784577 785974 R identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamyl-tRNA synthetase complement(784577..785974) Dichelobacter nodosus VCS1703A 5122161 YP_001209640.1 CDS DNO_0735 NC_009446.1 786124 786570 D identified by match to protein family HMM PF00903; match to protein family HMM TIGR00068; lactoylglutathione lyase 786124..786570 Dichelobacter nodosus VCS1703A 5122392 YP_001209641.1 CDS rho NC_009446.1 786607 787872 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(786607..787872) Dichelobacter nodosus VCS1703A 5122790 YP_001209642.1 CDS trxA NC_009446.1 787971 788297 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin I complement(787971..788297) Dichelobacter nodosus VCS1703A 5122524 YP_001209643.1 CDS DNO_0738 NC_009446.1 788697 788795 D hypothetical protein 788697..788795 Dichelobacter nodosus VCS1703A 5122133 YP_001209644.1 CDS DNO_0739 NC_009446.1 788865 789692 D identified by match to protein family HMM PF05838; hypothetical protein 788865..789692 Dichelobacter nodosus VCS1703A 5122967 YP_001209645.1 CDS DNO_0740 NC_009446.1 789685 789960 D hypothetical protein 789685..789960 Dichelobacter nodosus VCS1703A 5123370 YP_001209646.1 CDS DNO_0741 NC_009446.1 789863 790168 D hypothetical protein 789863..790168 Dichelobacter nodosus VCS1703A 5122764 YP_001209647.1 CDS DNO_0742 NC_009446.1 790165 790956 D hypothetical protein 790165..790956 Dichelobacter nodosus VCS1703A 5123135 YP_001209648.1 CDS DNO_0743 NC_009446.1 790934 792208 D identified by match to protein family HMM PF04466; match to protein family HMM TIGR01547; phage terminase, large subunit 790934..792208 Dichelobacter nodosus VCS1703A 5123040 YP_001209649.1 CDS DNO_0745 NC_009446.1 793659 795158 D identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641; phage virion morphogenesis-like protein 793659..795158 Dichelobacter nodosus VCS1703A 5123004 YP_001209650.1 CDS DNO_0746 NC_009446.1 795669 796067 D hypothetical protein 795669..796067 Dichelobacter nodosus VCS1703A 5123241 YP_001209651.1 CDS DNO_0747 NC_009446.1 796078 796899 D hypothetical protein 796078..796899 Dichelobacter nodosus VCS1703A 5122469 YP_001209652.1 CDS DNO_0748 NC_009446.1 796902 797888 D hypothetical protein 796902..797888 Dichelobacter nodosus VCS1703A 5122841 YP_001209653.1 CDS DNO_0749 NC_009446.1 797910 798377 D identified by match to protein family HMM PF07030; hypothetical protein 797910..798377 Dichelobacter nodosus VCS1703A 5123443 YP_001209654.1 CDS DNO_0750 NC_009446.1 798374 798799 D identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635; phage virion morphogenesis-like protein 798374..798799 Dichelobacter nodosus VCS1703A 5123271 YP_001209655.1 CDS DNO_0751 NC_009446.1 798780 799247 D hypothetical protein 798780..799247 Dichelobacter nodosus VCS1703A 5123138 YP_001209656.1 CDS DNO_0752 NC_009446.1 799244 800011 D hypothetical protein 799244..800011 Dichelobacter nodosus VCS1703A 5122829 YP_001209657.1 CDS DNO_0753 NC_009446.1 800014 800241 D hypothetical protein 800014..800241 Dichelobacter nodosus VCS1703A 5123025 YP_001209658.1 CDS DNO_0754 NC_009446.1 800249 800458 D hypothetical protein 800249..800458 Dichelobacter nodosus VCS1703A 5123414 YP_001209659.1 CDS DNO_0755 NC_009446.1 800495 804466 D identified by match to protein family HMM TIGR01760; phage tail tape measure family protein 800495..804466 Dichelobacter nodosus VCS1703A 5123277 YP_001209660.1 CDS DNO_0756 NC_009446.1 804463 804867 D hypothetical protein 804463..804867 Dichelobacter nodosus VCS1703A 5123239 YP_001209661.1 CDS DNO_0757 NC_009446.1 804876 808505 D hypothetical protein 804876..808505 Dichelobacter nodosus VCS1703A 5123378 YP_001209662.1 CDS DNO_0758 NC_009446.1 808507 809373 D hypothetical protein 808507..809373 Dichelobacter nodosus VCS1703A 5123147 YP_001209663.1 CDS DNO_0759 NC_009446.1 809285 809710 D hypothetical protein 809285..809710 Dichelobacter nodosus VCS1703A 5122347 YP_001209664.1 CDS DNO_0760 NC_009446.1 809707 811383 D hypothetical protein 809707..811383 Dichelobacter nodosus VCS1703A 5122733 YP_001209665.1 CDS DNO_0761 NC_009446.1 811392 811619 D hypothetical protein 811392..811619 Dichelobacter nodosus VCS1703A 5122773 YP_001209666.1 CDS DNO_0762 NC_009446.1 812055 812618 R hypothetical protein complement(812055..812618) Dichelobacter nodosus VCS1703A 5122145 YP_001209667.1 CDS DNO_0763 NC_009446.1 812666 814279 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; helicase family protein complement(812666..814279) Dichelobacter nodosus VCS1703A 5123406 YP_001209668.1 CDS DNO_0764 NC_009446.1 814328 815422 R hypothetical protein complement(814328..815422) Dichelobacter nodosus VCS1703A 5123255 YP_001209669.1 CDS DNO_0765 NC_009446.1 815574 816242 R hypothetical protein complement(815574..816242) Dichelobacter nodosus VCS1703A 5122888 YP_001209670.1 CDS DNO_0766 NC_009446.1 816363 816617 R hypothetical protein complement(816363..816617) Dichelobacter nodosus VCS1703A 5122701 YP_001209671.1 CDS ssb-2 NC_009446.1 816635 817090 R identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein complement(816635..817090) Dichelobacter nodosus VCS1703A 5122596 YP_001209672.1 CDS DNO_0768 NC_009446.1 817103 817960 R hypothetical protein complement(817103..817960) Dichelobacter nodosus VCS1703A 5122615 YP_001209673.1 CDS DNO_0769 NC_009446.1 817957 818562 R identified by match to protein family HMM PF04404; bacteriophage recombination function protein complement(817957..818562) Dichelobacter nodosus VCS1703A 5123044 YP_001209674.1 CDS DNO_0770 NC_009446.1 818588 818920 R hypothetical protein complement(818588..818920) Dichelobacter nodosus VCS1703A 5122712 YP_001209675.1 CDS DNO_0771 NC_009446.1 818920 819207 R hypothetical protein complement(818920..819207) Dichelobacter nodosus VCS1703A 5123326 YP_001209676.1 CDS DNO_0772 NC_009446.1 819315 820748 R hypothetical protein complement(819315..820748) Dichelobacter nodosus VCS1703A 5122389 YP_001209677.1 CDS regA2 NC_009446.1 820877 821794 R identified by match to protein family HMM PF00717; match to protein family HMM PF01381; regulatory protein RegA2 complement(820877..821794) Dichelobacter nodosus VCS1703A 5123012 YP_001209678.1 CDS DNO_0774 NC_009446.1 822196 822459 D hypothetical protein 822196..822459 Dichelobacter nodosus VCS1703A 5123115 YP_001209679.1 CDS DNO_0775 NC_009446.1 822460 823347 D hypothetical protein 822460..823347 Dichelobacter nodosus VCS1703A 5123151 YP_001209680.1 CDS dnaC NC_009446.1 823352 824116 D identified by match to protein family HMM PF01695; DNA replication protein DnaC 823352..824116 Dichelobacter nodosus VCS1703A 5122192 YP_001209681.1 CDS DNO_0780 NC_009446.1 826234 826611 D identified by match to protein family HMM PF05866; endodeoxyribonuclease RusA family protein 826234..826611 Dichelobacter nodosus VCS1703A 5123165 YP_001209682.1 CDS DNO_0781 NC_009446.1 826605 826961 D hypothetical protein 826605..826961 Dichelobacter nodosus VCS1703A 5122655 YP_001209683.1 CDS DNO_0782 NC_009446.1 826961 827212 D hypothetical protein 826961..827212 Dichelobacter nodosus VCS1703A 5122438 YP_001209684.1 CDS DNO_0783 NC_009446.1 827196 827603 D hypothetical protein 827196..827603 Dichelobacter nodosus VCS1703A 5123039 YP_001209685.1 CDS DNO_0784 NC_009446.1 828101 829300 R identified by match to protein family HMM PF00589; bacteriophage P4-like integrase complement(828101..829300) Dichelobacter nodosus VCS1703A 5122166 YP_001209686.1 CDS DNO_0785 NC_009446.1 829430 830461 D metallo-hydrolase family protein 829430..830461 Dichelobacter nodosus VCS1703A 5123100 YP_001209687.1 CDS DNO_0786 NC_009446.1 830502 830921 D identified by match to protein family HMM PF02566; OsmC-like protein 830502..830921 Dichelobacter nodosus VCS1703A 5122292 YP_001209688.1 CDS DNO_0787 NC_009446.1 831001 832341 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; multidrug efflux protein 831001..832341 Dichelobacter nodosus VCS1703A 5123463 YP_001209689.1 CDS folA NC_009446.1 832328 832822 D identified by match to protein family HMM PF00186; dihydrofolate reductase 832328..832822 Dichelobacter nodosus VCS1703A 5122668 YP_001209690.1 CDS DNO_0788 NC_009446.1 832819 833265 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(832819..833265) Dichelobacter nodosus VCS1703A 5123279 YP_001209691.1 CDS DNO_0790 NC_009446.1 833331 833513 R hypothetical protein complement(833331..833513) Dichelobacter nodosus VCS1703A 5122494 YP_001209692.1 CDS DNO_0791 NC_009446.1 833826 835031 R identified by match to protein family HMM PF04932; O-antigen ligase complement(833826..835031) Dichelobacter nodosus VCS1703A 5123345 YP_001209693.1 CDS msrA-B NC_009446.1 835028 835948 R identified by match to protein family HMM PF01625; match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine sulfoxide reductase MsrA-B complement(835028..835948) Dichelobacter nodosus VCS1703A 5123258 YP_001209694.1 CDS DNO_0794 NC_009446.1 836561 837130 D identified by match to protein family HMM PF04011; LemA family protein 836561..837130 Dichelobacter nodosus VCS1703A 5123260 YP_001209695.1 CDS DNO_0795 NC_009446.1 837137 839041 D identified by match to protein family HMM PF01435; M48 family peptidase 837137..839041 Dichelobacter nodosus VCS1703A 5123460 YP_001209696.1 CDS mgtE NC_009446.1 839131 840561 D identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 839131..840561 Dichelobacter nodosus VCS1703A 5122691 YP_001209697.1 CDS DNO_0797 NC_009446.1 840628 841680 D identified by match to protein family HMM PF00368; hydroxymethylglutaryl-coenzyme A reductase 840628..841680 Dichelobacter nodosus VCS1703A 5123360 YP_001209698.1 CDS DNO_0798 NC_009446.1 841680 842714 D catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 841680..842714 Dichelobacter nodosus VCS1703A 5122203 YP_001209699.1 CDS DNO_0799 NC_009446.1 842711 843865 D identified by match to protein family HMM PF01154; match to protein family HMM PF08540; match to protein family HMM TIGR01835; hydroxymethylglutaryl-CoA synthase 842711..843865 Dichelobacter nodosus VCS1703A 5123019 YP_001209700.1 CDS DNO_0800 NC_009446.1 843862 844920 D identified by match to protein family HMM PF00288; GHMP kinase family protein 843862..844920 Dichelobacter nodosus VCS1703A 5122156 YP_001209701.1 CDS DNO_0801 NC_009446.1 844975 845565 D identified by match to protein family HMM PF02627; hypothetical protein 844975..845565 Dichelobacter nodosus VCS1703A 5122138 YP_001209702.1 CDS DNO_0802 NC_009446.1 845607 846896 R identified by match to protein family HMM PF01734; patatin-like phospholipase family protein complement(845607..846896) Dichelobacter nodosus VCS1703A 5122552 YP_001209703.1 CDS DNO_0803 NC_009446.1 847023 847826 D identified by match to protein family HMM PF00459; inositol monophosphatase 847023..847826 Dichelobacter nodosus VCS1703A 5122220 YP_001209704.1 CDS DNO_0804 NC_009446.1 847837 848061 R hypothetical protein complement(847837..848061) Dichelobacter nodosus VCS1703A 5123227 YP_001209705.1 CDS DNO_0805 NC_009446.1 848054 849079 R identified by match to protein family HMM PF02424; thiamine biosynthesis lipoprotein ApbE complement(848054..849079) Dichelobacter nodosus VCS1703A 5122808 YP_001209706.1 CDS nqrF NC_009446.1 849072 850289 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F complement(849072..850289) Dichelobacter nodosus VCS1703A 5122659 YP_001209707.1 CDS nqrE NC_009446.1 850301 850912 R Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E complement(850301..850912) Dichelobacter nodosus VCS1703A 5122419 YP_001209708.1 CDS nqrD NC_009446.1 850912 851613 R identified by match to protein family HMM PF02508; match to protein family HMM TIGR01939; NADH:ubiquinone oxidoreductase, Na(+)- translocating, D subunit complement(850912..851613) Dichelobacter nodosus VCS1703A 5122887 YP_001209709.1 CDS nqrC NC_009446.1 851606 852454 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C complement(851606..852454) Dichelobacter nodosus VCS1703A 5122466 YP_001209710.1 CDS nqrB NC_009446.1 852447 853607 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B complement(852447..853607) Dichelobacter nodosus VCS1703A 5123430 YP_001209711.1 CDS nqrA NC_009446.1 853611 854957 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A complement(853611..854957) Dichelobacter nodosus VCS1703A 5122296 YP_001209712.1 CDS DNO_0813 NC_009446.1 855132 855509 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG complement(855132..855509) Dichelobacter nodosus VCS1703A 5122124 YP_001209713.1 CDS tpiA NC_009446.1 855506 856231 R identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triosephosphate isomerase complement(855506..856231) Dichelobacter nodosus VCS1703A 5122785 YP_001209714.1 CDS glmM NC_009446.1 856224 857579 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; phosphoglucosamine mutase complement(856224..857579) Dichelobacter nodosus VCS1703A 5122651 YP_001209715.1 CDS nhaA NC_009446.1 857585 858979 R identified by match to protein family HMM PF06965; match to protein family HMM TIGR00773; Na+-H+ antiporter NhaA complement(857585..858979) Dichelobacter nodosus VCS1703A 5123400 YP_001209716.1 CDS dapD NC_009446.1 859100 859915 D identified by match to protein family HMM TIGR00965; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 859100..859915 Dichelobacter nodosus VCS1703A 5122775 YP_001209717.1 CDS DNO_0818 NC_009446.1 860060 860533 D NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 860060..860533 Dichelobacter nodosus VCS1703A 5122441 YP_001209718.1 CDS DNO_0820 NC_009446.1 860549 861223 D identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 860549..861223 Dichelobacter nodosus VCS1703A 5122933 YP_001209719.1 CDS DNO_0819 NC_009446.1 861220 862455 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; two-component phosphate sensor PhoR complement(861220..862455) Dichelobacter nodosus VCS1703A 5123395 YP_001209720.1 CDS DNO_0821 NC_009446.1 862470 863309 R identified by match to protein family HMM PF00072; response regulator receiver domain-containing protein complement(862470..863309) Dichelobacter nodosus VCS1703A 5122549 YP_001209721.1 CDS DNO_0822 NC_009446.1 863327 864532 R identified by match to protein family HMM PF00072; match to protein family HMM PF04002; match to protein family HMM TIGR00608; response regulator receiver domain-containing protein complement(863327..864532) Dichelobacter nodosus VCS1703A 5122273 YP_001209722.1 CDS coaBC NC_009446.1 864762 865958 D identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 864762..865958 Dichelobacter nodosus VCS1703A 5122214 YP_001209723.1 CDS DNO_0824 NC_009446.1 865939 866403 D identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; deoxyuridine 5'-triphosphate nucleotidohydrolase 865939..866403 Dichelobacter nodosus VCS1703A 5122840 YP_001209724.1 CDS grpE NC_009446.1 866548 867111 D identified by match to protein family HMM PF01025; co-chaperone GrpE 866548..867111 Dichelobacter nodosus VCS1703A 5123018 YP_001209725.1 CDS dnaK NC_009446.1 867220 869148 D identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK 867220..869148 Dichelobacter nodosus VCS1703A 5122459 YP_001209726.1 CDS dnaJ NC_009446.1 869202 870326 D identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ 869202..870326 Dichelobacter nodosus VCS1703A 5123404 YP_001209727.1 CDS agcS NC_009446.1 870575 872002 D identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein 870575..872002 Dichelobacter nodosus VCS1703A 5122730 YP_001209728.1 CDS DNO_0829 NC_009446.1 872049 872912 R identified by match to protein family HMM PF00248; aldo/keto reductase family oxidoreductase complement(872049..872912) Dichelobacter nodosus VCS1703A 5122976 YP_001209729.1 CDS DNO_0830 NC_009446.1 873023 873466 D identified by match to protein family HMM PF03061; acyl-CoA thioester hydrolase 873023..873466 Dichelobacter nodosus VCS1703A 5123381 YP_001209730.1 CDS DNO_0831 NC_009446.1 873539 874279 R extracellular solute-binding family protein complement(873539..874279) Dichelobacter nodosus VCS1703A 5122159 YP_001209731.1 CDS DNO_0832 NC_009446.1 874341 874697 R identified by match to protein family HMM PF01883; hypothetical protein complement(874341..874697) Dichelobacter nodosus VCS1703A 5122703 YP_001209732.1 CDS DNO_0833 NC_009446.1 874700 875140 R identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; NifU family SUF system FeS assembly protein complement(874700..875140) Dichelobacter nodosus VCS1703A 5122262 YP_001209733.1 CDS sufS NC_009446.1 875137 876351 R identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; cysteine desulfurase SufS complement(875137..876351) Dichelobacter nodosus VCS1703A 5122454 YP_001209734.1 CDS sufD NC_009446.1 876341 877480 R identified by match to protein family HMM PF01458; SufD protein complement(876341..877480) Dichelobacter nodosus VCS1703A 5122946 YP_001209735.1 CDS sufC NC_009446.1 877477 878235 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC complement(877477..878235) Dichelobacter nodosus VCS1703A 5122666 YP_001209736.1 CDS sufB NC_009446.1 878266 879720 R identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB complement(878266..879720) Dichelobacter nodosus VCS1703A 5122360 YP_001209737.1 CDS DNO_0838 NC_009446.1 879717 880142 R identified by match to protein family HMM PF02082; match to protein family HMM PF08279; match to protein family HMM TIGR00738; match to protein family HMM TIGR02944; Rrf2 family protein complement(879717..880142) Dichelobacter nodosus VCS1703A 5122222 YP_001209738.1 CDS DNO_0839 NC_009446.1 880216 882024 R identified by match to protein family HMM PF01841; transglutaminase family protein complement(880216..882024) Dichelobacter nodosus VCS1703A 5122822 YP_001209739.1 CDS DNO_0840 NC_009446.1 882053 882259 R hypothetical protein complement(882053..882259) Dichelobacter nodosus VCS1703A 5123134 YP_001209740.1 CDS DNO_0841 NC_009446.1 882246 883202 R identified by match to protein family HMM PF01882; hypothetical protein complement(882246..883202) Dichelobacter nodosus VCS1703A 5122927 YP_001209741.1 CDS DNO_0842 NC_009446.1 883199 884128 R identified by match to protein family HMM PF07726; match to protein family HMM PF07728; MoxR family protein complement(883199..884128) Dichelobacter nodosus VCS1703A 5123175 YP_001209742.1 CDS lpxK NC_009446.1 884140 885147 R identified by match to protein family HMM PF02606; match to protein family HMM TIGR00682; tetraacyldisaccharide 4'-kinase complement(884140..885147) Dichelobacter nodosus VCS1703A 5123305 YP_001209743.1 CDS DNO_0844 NC_009446.1 885289 886164 D identified by match to protein family HMM PF00293; NUDIX domain-containing protein 885289..886164 Dichelobacter nodosus VCS1703A 5123158 YP_001209744.1 CDS DNO_0847 NC_009446.1 886623 888140 R hypothetical protein complement(886623..888140) Dichelobacter nodosus VCS1703A 5123272 YP_001209745.1 CDS DNO_0848 NC_009446.1 888192 889133 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase family protein complement(888192..889133) Dichelobacter nodosus VCS1703A 5122530 YP_001209746.1 CDS DNO_0849 NC_009446.1 889209 889814 R identified by match to protein family HMM PF01914; MarC family membrane protein complement(889209..889814) Dichelobacter nodosus VCS1703A 5122690 YP_001209747.1 CDS DNO_0850 NC_009446.1 890077 890484 R identified by match to protein family HMM PF04386; stringent starvation protein B complement(890077..890484) Dichelobacter nodosus VCS1703A 5122557 YP_001209748.1 CDS DNO_0851 NC_009446.1 890525 891172 R identified by match to protein family HMM PF02798; stringent starvation protein A complement(890525..891172) Dichelobacter nodosus VCS1703A 5123050 YP_001209749.1 CDS DNO_0852 NC_009446.1 891273 892016 R identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein complement(891273..892016) Dichelobacter nodosus VCS1703A 5122588 YP_001209750.1 CDS murA NC_009446.1 892016 893275 R identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1- carboxyvinyltransferase complement(892016..893275) Dichelobacter nodosus VCS1703A 5122155 YP_001209751.1 CDS DNO_0854 NC_009446.1 893275 893499 R identified by match to protein family HMM PF01722; BolA family protein complement(893275..893499) Dichelobacter nodosus VCS1703A 5122256 YP_001209752.1 CDS DNO_0855 NC_009446.1 893489 893797 R hypothetical protein complement(893489..893797) Dichelobacter nodosus VCS1703A 5122864 YP_001209753.1 CDS DNO_0856 NC_009446.1 893797 894393 R identified by match to protein family HMM PF05494; toluene tolerance family protein complement(893797..894393) Dichelobacter nodosus VCS1703A 5122539 YP_001209754.1 CDS DNO_0857 NC_009446.1 894415 895227 R identified by match to protein family HMM PF02470; mce related family protein complement(894415..895227) Dichelobacter nodosus VCS1703A 5122152 YP_001209755.1 CDS DNO_0858 NC_009446.1 895236 896024 R identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; hypothetical protein complement(895236..896024) Dichelobacter nodosus VCS1703A 5122583 YP_001209756.1 CDS DNO_0859 NC_009446.1 896008 896823 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(896008..896823) Dichelobacter nodosus VCS1703A 5122571 YP_001209757.1 CDS DNO_0860 NC_009446.1 896848 900942 R identified by match to protein family HMM PF04357; hypothetical protein complement(896848..900942) Dichelobacter nodosus VCS1703A 5122746 YP_001209758.1 CDS DNO_0861 NC_009446.1 901013 902812 R identified by match to protein family HMM PF01103; outer membrane protein complement(901013..902812) Dichelobacter nodosus VCS1703A 5122232 YP_001209759.1 CDS mviN NC_009446.1 902815 904341 R identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; virulence factor MviN family protein complement(902815..904341) Dichelobacter nodosus VCS1703A 5123211 YP_001209760.1 CDS metF NC_009446.1 904338 905219 R identified by match to protein family HMM PF02219; 5,10-methylenetetrahydrofolate reductase complement(904338..905219) Dichelobacter nodosus VCS1703A 5123212 YP_001209761.1 CDS DNO_0864 NC_009446.1 905194 905433 R lipoprotein complement(905194..905433) Dichelobacter nodosus VCS1703A 5122842 YP_001209762.1 CDS DNO_0865 NC_009446.1 905560 906858 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent rna helicase Rhl 905560..906858 Dichelobacter nodosus VCS1703A 5122237 YP_001209763.1 CDS DNO_0866 NC_009446.1 906861 907523 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(906861..907523) Dichelobacter nodosus VCS1703A 5122879 YP_001209764.1 CDS DNO_0867 NC_009446.1 907598 908035 R hypothetical protein complement(907598..908035) Dichelobacter nodosus VCS1703A 5123226 YP_001209765.1 CDS DNO_0868 NC_009446.1 908050 908418 R identified by match to protein family HMM PF00072; two-component response regulator complement(908050..908418) Dichelobacter nodosus VCS1703A 5123058 YP_001209766.1 CDS DNO_0869 NC_009446.1 908431 910638 R identified by match to protein family HMM PF01627; match to protein family HMM PF02518; two-component sensor kinase complement(908431..910638) Dichelobacter nodosus VCS1703A 5122700 YP_001209767.1 CDS DNO_0870 NC_009446.1 910905 911636 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 910905..911636 Dichelobacter nodosus VCS1703A 5123060 YP_001209768.1 CDS DNO_0871 NC_009446.1 911659 912843 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; macrolide-specific ABC-type efflux protein 911659..912843 Dichelobacter nodosus VCS1703A 5123264 YP_001209769.1 CDS DNO_0872 NC_009446.1 912843 914777 D identified by match to protein family HMM PF00005; match to protein family HMM PF02687; macrolide-specific ABC-type efflux carrier protein 912843..914777 Dichelobacter nodosus VCS1703A 5122455 YP_001209770.1 CDS DNO_0873 NC_009446.1 914867 915475 D identified by match to protein family HMM PF04972; lipoprotein 914867..915475 Dichelobacter nodosus VCS1703A 5122883 YP_001209771.1 CDS aspA NC_009446.1 915753 917153 D catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 915753..917153 Dichelobacter nodosus VCS1703A 5122229 YP_001209772.1 CDS ftsY NC_009446.1 917311 918663 D identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle protein 917311..918663 Dichelobacter nodosus VCS1703A 5122721 YP_001209773.1 CDS rpoH NC_009446.1 918682 919575 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02392; match to protein family HMM TIGR02937; RNA polymerase sigma-32 factor 918682..919575 Dichelobacter nodosus VCS1703A 5122485 YP_001209774.1 CDS fur NC_009446.1 919622 920044 D identified by match to protein family HMM PF01475; ferric uptake regulator 919622..920044 Dichelobacter nodosus VCS1703A 5123323 YP_001209775.1 CDS DNO_0878 NC_009446.1 920057 920611 R hypothetical protein complement(920057..920611) Dichelobacter nodosus VCS1703A 5123009 YP_001209776.1 CDS DNO_0879 NC_009446.1 920640 921359 D identified by match to protein family HMM PF04391; hypothetical protein 920640..921359 Dichelobacter nodosus VCS1703A 5123240 YP_001209777.1 CDS DNO_0880 NC_009446.1 921431 922204 D identified by match to protein family HMM PF01226; formate/nitrite transporter family protein 921431..922204 Dichelobacter nodosus VCS1703A 5122731 YP_001209778.1 CDS DNO_0881 NC_009446.1 922683 923444 D hypothetical protein 922683..923444 Dichelobacter nodosus VCS1703A 5122803 YP_001209779.1 CDS DNO_0882 NC_009446.1 923650 923934 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; ComEA-like protein complement(923650..923934) Dichelobacter nodosus VCS1703A 5122936 YP_001209780.1 CDS DNO_0888 NC_009446.1 929541 930476 D identified by match to protein family HMM PF01075; heptosyltransferase family protein 929541..930476 Dichelobacter nodosus VCS1703A 5122422 YP_001209781.1 CDS znuA NC_009446.1 930516 931511 D identified by match to protein family HMM PF01297; high-affinity zinc uptake system protein 930516..931511 Dichelobacter nodosus VCS1703A 5123455 YP_001209782.1 CDS DNO_0890 NC_009446.1 931566 932021 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; type IV fimbrial biogenesis protein complement(931566..932021) Dichelobacter nodosus VCS1703A 5122608 YP_001209783.1 CDS DNO_0891 NC_009446.1 932036 932515 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; type IV fimbrial biogenesis protein complement(932036..932515) Dichelobacter nodosus VCS1703A 5123052 YP_001209784.1 CDS DNO_0892 NC_009446.1 932517 933182 R hypothetical protein complement(932517..933182) Dichelobacter nodosus VCS1703A 5122568 YP_001209785.1 CDS DNO_0893 NC_009446.1 933179 934324 R hypothetical protein complement(933179..934324) Dichelobacter nodosus VCS1703A 5123472 YP_001209786.1 CDS pilV NC_009446.1 934334 934903 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02523; match to protein family HMM TIGR02532; hypothetical protein complement(934334..934903) Dichelobacter nodosus VCS1703A 5122381 YP_001209787.1 CDS pilC NC_009446.1 934967 938785 R type IV fimbrial tip adhesin complement(934967..938785) Dichelobacter nodosus VCS1703A 5122989 YP_001209788.1 CDS DNO_0896 NC_009446.1 938824 938994 R hypothetical protein complement(938824..938994) Dichelobacter nodosus VCS1703A 5122523 YP_001209789.1 CDS lipB NC_009446.1 938961 939563 R identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214; lipoate-protein ligase B complement(938961..939563) Dichelobacter nodosus VCS1703A 5122403 YP_001209790.1 CDS DNO_0898 NC_009446.1 939565 939837 R identified by match to protein family HMM PF04359; hypothetical protein complement(939565..939837) Dichelobacter nodosus VCS1703A 5123348 YP_001209791.1 CDS DNO_0899 NC_009446.1 939848 940975 R identified by match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase complement(939848..940975) Dichelobacter nodosus VCS1703A 5122660 YP_001209792.1 CDS DNO_0900 NC_009446.1 941015 942373 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two-component sensor kinase complement(941015..942373) Dichelobacter nodosus VCS1703A 5122595 YP_001209793.1 CDS DNO_0901 NC_009446.1 942468 943157 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two-component copper resistance response regulator complement(942468..943157) Dichelobacter nodosus VCS1703A 5122638 YP_001209794.1 CDS degQ NC_009446.1 943264 944667 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM PF03510; match to protein family HMM TIGR02037; serine protease 943264..944667 Dichelobacter nodosus VCS1703A 5122811 YP_001209795.1 CDS DNO_0903 NC_009446.1 944723 945412 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two component phosphate response regulator PhoB complement(944723..945412) Dichelobacter nodosus VCS1703A 5123209 YP_001209796.1 CDS orn NC_009446.1 945461 946003 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(945461..946003) Dichelobacter nodosus VCS1703A 5122626 YP_001209797.1 CDS DNO_0905 NC_009446.1 946052 946711 R identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase complement(946052..946711) Dichelobacter nodosus VCS1703A 5122896 YP_001209798.1 CDS dnaQ NC_009446.1 946733 947434 R identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573; match to protein family HMM TIGR01406; DNA polymerase III subunit epsilon complement(946733..947434) Dichelobacter nodosus VCS1703A 5122458 YP_001209799.1 CDS DNO_0907 NC_009446.1 947436 949052 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase complement(947436..949052) Dichelobacter nodosus VCS1703A 5122869 YP_001209800.1 CDS deoA NC_009446.1 949077 950411 R identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02643; match to protein family HMM TIGR02644; thymidine phosphorylase complement(949077..950411) Dichelobacter nodosus VCS1703A 5122276 YP_001209801.1 CDS deoC NC_009446.1 950426 951169 R identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase complement(950426..951169) Dichelobacter nodosus VCS1703A 5123321 YP_001209802.1 CDS nrdD NC_009446.1 951372 953204 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(951372..953204) Dichelobacter nodosus VCS1703A 5123103 YP_001209803.1 CDS nrdG NC_009446.1 953201 953683 R identified by match to protein family HMM TIGR02826; anaerobic ribonucleoside-triphosphate reductase activating protein complement(953201..953683) Dichelobacter nodosus VCS1703A 5123403 YP_001209804.1 CDS hslR NC_009446.1 954066 954485 R identified by match to protein family HMM PF01479; ribosome-associated heat shock protein complement(954066..954485) Dichelobacter nodosus VCS1703A 5122463 YP_001209805.1 CDS DNO_0913 NC_009446.1 954454 954774 R identified by match to protein family HMM PF03776; septum formation topological specificity factor MinE superfamily protein complement(954454..954774) Dichelobacter nodosus VCS1703A 5122432 YP_001209806.1 CDS minD NC_009446.1 954771 955592 R identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD complement(954771..955592) Dichelobacter nodosus VCS1703A 5122646 YP_001209807.1 CDS minC NC_009446.1 955663 956397 R identified by match to protein family HMM PF03775; match to protein family HMM TIGR01222; septum formation inhibitor MinC complement(955663..956397) Dichelobacter nodosus VCS1703A 5122189 YP_001209808.1 CDS DNO_0916 NC_009446.1 956427 958292 R peptidyl-prolyl cis-trans isomerase complement(956427..958292) Dichelobacter nodosus VCS1703A 5122985 YP_001209809.1 CDS xth-2 NC_009446.1 958309 959085 R identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III complement(958309..959085) Dichelobacter nodosus VCS1703A 5122343 YP_001209810.1 CDS pyrE NC_009446.1 959111 959776 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 959111..959776 Dichelobacter nodosus VCS1703A 5123292 YP_001209811.1 CDS purH NC_009446.1 959773 961338 R identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(959773..961338) Dichelobacter nodosus VCS1703A 5122346 YP_001209812.1 CDS ostA NC_009446.1 961477 963669 D identified by match to protein family HMM PF03968; match to protein family HMM PF04453; organic solvent tolerance protein 961477..963669 Dichelobacter nodosus VCS1703A 5122531 YP_001209813.1 CDS DNO_0921 NC_009446.1 963691 964956 D identified by match to protein family HMM PF00639; match to protein family HMM PF09312; PpiC-type peptidylprolyl cis-trans isomerase 963691..964956 Dichelobacter nodosus VCS1703A 5123421 YP_001209814.1 CDS ksgA NC_009446.1 964953 965744 D identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755; rRNA adenine dimethylase 964953..965744 Dichelobacter nodosus VCS1703A 5122599 YP_001209815.1 CDS DNO_0923 NC_009446.1 965741 966478 D identified by match to protein family HMM PF00106; short chain dehydrogenase family protein 965741..966478 Dichelobacter nodosus VCS1703A 5122309 YP_001209816.1 CDS dsbG NC_009446.1 966530 967321 R protein disulfide isomerase complement(966530..967321) Dichelobacter nodosus VCS1703A 5122597 YP_001209817.1 CDS DNO_0925 NC_009446.1 967525 967971 R identified by match to protein family HMM PF00149; phosphoesterase domain-containing protein complement(967525..967971) Dichelobacter nodosus VCS1703A 5123399 YP_001209818.1 CDS DNO_0926 NC_009446.1 968175 968483 D identified by match to protein family HMM PF01817; chorismate mutase family protein 968175..968483 Dichelobacter nodosus VCS1703A 5122960 YP_001209819.1 CDS DNO_0927 NC_009446.1 968588 968698 R hypothetical protein complement(968588..968698) Dichelobacter nodosus VCS1703A 5123423 YP_001209820.1 CDS DNO_0928 NC_009446.1 968792 969748 D identified by match to protein family HMM PF04228; hypothetical protein 968792..969748 Dichelobacter nodosus VCS1703A 5123192 YP_001209821.1 CDS pdxK NC_009446.1 969820 970653 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxal kinase 969820..970653 Dichelobacter nodosus VCS1703A 5123333 YP_001209822.1 CDS DNO_0930 NC_009446.1 971004 972782 D hypothetical protein 971004..972782 Dichelobacter nodosus VCS1703A 5122512 YP_001209823.1 CDS dcuC NC_009446.1 972997 974520 D identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808; C4-dicarboxylate anaerobic carrier 972997..974520 Dichelobacter nodosus VCS1703A 5122446 YP_001209824.1 CDS DNO_0932 NC_009446.1 974590 975408 R identified by match to protein family HMM PF02110; hydroxyethylthiazole kinase complement(974590..975408) Dichelobacter nodosus VCS1703A 5122270 YP_001209825.1 CDS rimI NC_009446.1 975405 975833 R identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase complement(975405..975833) Dichelobacter nodosus VCS1703A 5122664 YP_001209826.1 CDS metG NC_009446.1 975852 977873 R identified by match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399; methionyl-tRNA synthetase complement(975852..977873) Dichelobacter nodosus VCS1703A 5122924 YP_001209827.1 CDS DNO_0935 NC_009446.1 978028 978498 D identified by match to protein family HMM PF02590; match to protein family HMM TIGR00246; hypothetical protein 978028..978498 Dichelobacter nodosus VCS1703A 5122997 YP_001209828.1 CDS DNO_0936 NC_009446.1 978558 979424 D identified by match to protein family HMM PF00571; match to protein family HMM PF03471; transporter associated domain-containing protein 978558..979424 Dichelobacter nodosus VCS1703A 5123244 YP_001209829.1 CDS DNO_0937 NC_009446.1 979440 980330 R identified by match to protein family HMM PF03734; hypothetical protein complement(979440..980330) Dichelobacter nodosus VCS1703A 5123412 YP_001209830.1 CDS lysS NC_009446.1 980358 981854 R identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysyl-tRNA synthetase complement(980358..981854) Dichelobacter nodosus VCS1703A 5122266 YP_001209831.1 CDS prfB NC_009446.1 981851 982768 R identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 complement(981851..982768) Dichelobacter nodosus VCS1703A 5122259 YP_001209832.1 CDS purD NC_009446.1 983126 984391 D identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylglycinamide synthetase 983126..984391 Dichelobacter nodosus VCS1703A 5122676 YP_001209833.1 CDS galE NC_009446.1 984388 985398 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 984388..985398 Dichelobacter nodosus VCS1703A 5123071 YP_001209834.1 CDS DNO_0942 NC_009446.1 985431 986168 R identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein complement(985431..986168) Dichelobacter nodosus VCS1703A 5123150 YP_001209835.1 CDS DNO_0944 NC_009446.1 986413 987147 D hypothetical protein 986413..987147 Dichelobacter nodosus VCS1703A 5123285 YP_001209836.1 CDS DNO_0945 NC_009446.1 987190 988236 R identified by match to protein family HMM PF00348; polyprenyl synthase complement(987190..988236) Dichelobacter nodosus VCS1703A 5122305 YP_001209837.1 CDS trmE NC_009446.1 988585 989937 R identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; match to protein family HMM TIGR00650; tRNA modification GTPase TrmE complement(988585..989937) Dichelobacter nodosus VCS1703A 5123176 YP_001209838.1 CDS DNO_0949 NC_009446.1 989934 991568 R identified by match to protein family HMM PF02096; preprotein translocase subunit YidC complement(989934..991568) Dichelobacter nodosus VCS1703A 5122705 YP_001209839.1 CDS DNO_0950 NC_009446.1 991558 991794 R identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein complement(991558..991794) Dichelobacter nodosus VCS1703A 5122589 YP_001209840.1 CDS rnpA NC_009446.1 991791 992141 R identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component complement(991791..992141) Dichelobacter nodosus VCS1703A 5122563 YP_001209841.1 CDS rpmH NC_009446.1 992144 992281 R identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; 50S ribosomal protein L34 complement(992144..992281) Dichelobacter nodosus VCS1703A 5122661 YP_001209842.1 CDS recR NC_009446.1 992387 992992 R identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR complement(992387..992992) Dichelobacter nodosus VCS1703A 5122653 YP_001209843.1 CDS DNO_0954 NC_009446.1 992993 993319 R identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein complement(992993..993319) Dichelobacter nodosus VCS1703A 5122470 YP_001209844.1 CDS dnaX NC_009446.1 993316 995313 R identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III subunits gamma and tau complement(993316..995313) Dichelobacter nodosus VCS1703A 5122913 YP_001209845.1 CDS DNO_0956 NC_009446.1 995520 996956 R hypothetical protein complement(995520..996956) Dichelobacter nodosus VCS1703A 5122706 YP_001209846.1 CDS DNO_0957 NC_009446.1 996965 997558 R identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; ADP-ribose pyrophosphatase complement(996965..997558) Dichelobacter nodosus VCS1703A 5122430 YP_001209847.1 CDS DNO_0958 NC_009446.1 997560 998261 R identified by match to protein family HMM PF01476; match to protein family HMM PF01551; lipoprotein complement(997560..998261) Dichelobacter nodosus VCS1703A 5123468 YP_001209848.1 CDS surE NC_009446.1 998258 999010 R identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087; acid phosphatase SurE complement(998258..999010) Dichelobacter nodosus VCS1703A 5122395 YP_001209849.1 CDS DNO_0960 NC_009446.1 999154 999804 D hypothetical protein 999154..999804 Dichelobacter nodosus VCS1703A 5122508 YP_001209850.1 CDS DNO_0961 NC_009446.1 999808 1000410 R identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; lipoprotein A domain-containing protein complement(999808..1000410) Dichelobacter nodosus VCS1703A 5123445 YP_001209851.1 CDS DNO_0962 NC_009446.1 1000429 1001445 R identified by match to protein family HMM TIGR02282; membrane-bound lytic murein transglycosylase complement(1000429..1001445) Dichelobacter nodosus VCS1703A 5122294 YP_001209852.1 CDS rodA NC_009446.1 1001442 1002566 R identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape determining protein complement(1001442..1002566) Dichelobacter nodosus VCS1703A 5122920 YP_001209853.1 CDS DNO_0964 NC_009446.1 1002563 1004455 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 2 complement(1002563..1004455) Dichelobacter nodosus VCS1703A 5123253 YP_001209854.1 CDS DNO_0965 NC_009446.1 1004448 1004927 R hypothetical protein complement(1004448..1004927) Dichelobacter nodosus VCS1703A 5122286 YP_001209855.1 CDS mreC NC_009446.1 1004927 1005799 R identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219; rod shape-determining protein MreC complement(1004927..1005799) Dichelobacter nodosus VCS1703A 5122484 YP_001209856.1 CDS mreB NC_009446.1 1005801 1006850 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(1005801..1006850) Dichelobacter nodosus VCS1703A 5122308 YP_001209857.1 CDS gatC NC_009446.1 1007043 1007333 D identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase subunit C 1007043..1007333 Dichelobacter nodosus VCS1703A 5122882 YP_001209858.1 CDS gatA NC_009446.1 1007336 1008799 D identified by match to protein family HMM PF01425; match to protein family HMM TIGR00132; glutamyl-tRNA(Gln) amidotransferase subunit A 1007336..1008799 Dichelobacter nodosus VCS1703A 5122769 YP_001209859.1 CDS DNO_0970 NC_009446.1 1008813 1010708 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1008813..1010708) Dichelobacter nodosus VCS1703A 5122697 YP_001209860.1 CDS metK NC_009446.1 1010709 1011857 R identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; S-adenosylmethionine synthetase complement(1010709..1011857) Dichelobacter nodosus VCS1703A 5123316 YP_001209861.1 CDS DNO_0972 NC_009446.1 1011854 1012261 R identified by match to protein family HMM PF00293; NUDIX domain-containing protein complement(1011854..1012261) Dichelobacter nodosus VCS1703A 5123189 YP_001209862.1 CDS secA NC_009446.1 1012258 1014978 R identified by match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; Preprotein translocase subunit SecA complement(1012258..1014978) Dichelobacter nodosus VCS1703A 5122944 YP_001209863.1 CDS DNO_0974 NC_009446.1 1015031 1015564 D hypothetical protein 1015031..1015564 Dichelobacter nodosus VCS1703A 5123284 YP_001209864.1 CDS lpxC NC_009446.1 1015617 1016546 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(1015617..1016546) Dichelobacter nodosus VCS1703A 5122218 YP_001209865.1 CDS ftsZ NC_009446.1 1016548 1017717 R identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ complement(1016548..1017717) Dichelobacter nodosus VCS1703A 5122912 YP_001209866.1 CDS ftsA NC_009446.1 1017734 1018954 R identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(1017734..1018954) Dichelobacter nodosus VCS1703A 5122436 YP_001209867.1 CDS DNO_0978 NC_009446.1 1018972 1019751 R identified by match to protein family HMM PF03799; match to protein family HMM PF08478; cell division protein FtsQ complement(1018972..1019751) Dichelobacter nodosus VCS1703A 5123457 YP_001209868.1 CDS DNO_0979 NC_009446.1 1019790 1020722 R identified by match to protein family HMM PF01820; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-alanine-D-alanine ligase complement(1019790..1020722) Dichelobacter nodosus VCS1703A 5123142 YP_001209869.1 CDS murC NC_009446.1 1020730 1022166 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate-alanine ligase complement(1020730..1022166) Dichelobacter nodosus VCS1703A 5123162 YP_001209870.1 CDS murG NC_009446.1 1022163 1023254 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(1022163..1023254) Dichelobacter nodosus VCS1703A 5123222 YP_001209871.1 CDS ftsW NC_009446.1 1023251 1024444 R identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell division protein FtsW complement(1023251..1024444) Dichelobacter nodosus VCS1703A 5122254 YP_001209872.1 CDS murD NC_009446.1 1024428 1025738 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(1024428..1025738) Dichelobacter nodosus VCS1703A 5122632 YP_001209873.1 CDS mraY NC_009446.1 1025749 1026831 R identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1025749..1026831) Dichelobacter nodosus VCS1703A 5123465 YP_001209874.1 CDS murF NC_009446.1 1026834 1028168 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(1026834..1028168) Dichelobacter nodosus VCS1703A 5122813 YP_001209875.1 CDS murE NC_009446.1 1028165 1029613 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01085; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase complement(1028165..1029613) Dichelobacter nodosus VCS1703A 5122465 YP_001209876.1 CDS ftsI NC_009446.1 1029597 1031474 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; cell division protein FtsI complement(1029597..1031474) Dichelobacter nodosus VCS1703A 5122783 YP_001209877.1 CDS DNO_0988 NC_009446.1 1031477 1031740 R hypothetical protein complement(1031477..1031740) Dichelobacter nodosus VCS1703A 5123195 YP_001209878.1 CDS mraW NC_009446.1 1031737 1032663 R identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW complement(1031737..1032663) Dichelobacter nodosus VCS1703A 5122385 YP_001209879.1 CDS DNO_0990 NC_009446.1 1032738 1033013 R identified by match to protein family HMM PF03658; hypothetical protein complement(1032738..1033013) Dichelobacter nodosus VCS1703A 5122587 YP_001209880.1 CDS DNO_0991 NC_009446.1 1033000 1033431 R identified by match to protein family HMM PF03364; aromatic-rich family protein complement(1033000..1033431) Dichelobacter nodosus VCS1703A 5122681 YP_001209881.1 CDS smpB NC_009446.1 1033490 1033969 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1033490..1033969 Dichelobacter nodosus VCS1703A 5122564 YP_001209882.1 CDS DNO_0993 NC_009446.1 1033966 1034673 D identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 1033966..1034673 Dichelobacter nodosus VCS1703A 5122750 YP_001209883.1 CDS DNO_0994 NC_009446.1 1034687 1035442 D identified by match to protein family HMM PF00497; extracellular solute-binding fmaily protein 1034687..1035442 Dichelobacter nodosus VCS1703A 5122401 YP_001209884.1 CDS DNO_0996 NC_009446.1 1036550 1036777 R hypothetical protein complement(1036550..1036777) Dichelobacter nodosus VCS1703A 5122415 YP_001209885.1 CDS DNO_0997 NC_009446.1 1036922 1037395 R putative lipoprotein complement(1036922..1037395) Dichelobacter nodosus VCS1703A 5122890 YP_001209886.1 CDS DNO_0998 NC_009446.1 1037426 1038346 R identified by match to protein family HMM PF03279; lipid A biosynthesis lauroyl acyltransferase complement(1037426..1038346) Dichelobacter nodosus VCS1703A 5123245 YP_001209887.1 CDS maf-2 NC_009446.1 1038413 1039000 D identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; Maf-like protein 1038413..1039000 Dichelobacter nodosus VCS1703A 5123179 YP_001209888.1 CDS DNO_0999 NC_009446.1 1038947 1039918 R identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; SspA family peptidase complement(1038947..1039918) Dichelobacter nodosus VCS1703A 5122173 YP_001209889.1 CDS rluC NC_009446.1 1039922 1040863 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase, RluC complement(1039922..1040863) Dichelobacter nodosus VCS1703A 5122123 YP_001209890.1 CDS DNO_1002 NC_009446.1 1040981 1042696 R identified by match to protein family HMM PF00501; long-chain-fatty-acid--CoA ligase complement(1040981..1042696) Dichelobacter nodosus VCS1703A 5123273 YP_001209891.1 CDS DNO_1003 NC_009446.1 1042891 1043970 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1042891..1043970 Dichelobacter nodosus VCS1703A 5122825 YP_001209892.1 CDS DNO_1004 NC_009446.1 1044005 1044574 D identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; hypothetical protein 1044005..1044574 Dichelobacter nodosus VCS1703A 5122472 YP_001209893.1 CDS coaD NC_009446.1 1044577 1045068 D identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 1044577..1045068 Dichelobacter nodosus VCS1703A 5122814 YP_001209894.1 CDS DNO_1006 NC_009446.1 1045128 1045349 D lipoprotein 1045128..1045349 Dichelobacter nodosus VCS1703A 5122397 YP_001209895.1 CDS rpsP NC_009446.1 1045499 1045753 D identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 1045499..1045753 Dichelobacter nodosus VCS1703A 5123114 YP_001209896.1 CDS DNO_1008 NC_009446.1 1045753 1046280 D identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 1045753..1046280 Dichelobacter nodosus VCS1703A 5123362 YP_001209897.1 CDS trmD NC_009446.1 1046243 1047022 D identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N1-)-methyltransferase 1046243..1047022 Dichelobacter nodosus VCS1703A 5122791 YP_001209898.1 CDS rplS NC_009446.1 1047022 1047384 D identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024; 50S ribosomal protein L19 1047022..1047384 Dichelobacter nodosus VCS1703A 5122786 YP_001209899.1 CDS cysQ NC_009446.1 1047404 1048216 D identified by match to protein family HMM PF00459; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 1047404..1048216 Dichelobacter nodosus VCS1703A 5123017 YP_001209900.1 CDS DNO_1013 NC_009446.1 1048295 1049479 D identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988; hypothetical protein 1048295..1049479 Dichelobacter nodosus VCS1703A 5123169 YP_001209901.1 CDS DNO_1012 NC_009446.1 1049468 1049596 R hypothetical protein complement(1049468..1049596) Dichelobacter nodosus VCS1703A 5122600 YP_001209902.1 CDS DNO_1014 NC_009446.1 1049706 1050176 D hypothetical protein 1049706..1050176 Dichelobacter nodosus VCS1703A 5123296 YP_001209903.1 CDS DNO_1015 NC_009446.1 1050212 1050886 D identified by match to protein family HMM PF00702; hypothetical protein 1050212..1050886 Dichelobacter nodosus VCS1703A 5122922 YP_001209904.1 CDS DNO_1016 NC_009446.1 1050980 1051342 R lipoprotein complement(1050980..1051342) Dichelobacter nodosus VCS1703A 5122878 YP_001209905.1 CDS DNO_1017 NC_009446.1 1051702 1053030 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase 1051702..1053030 Dichelobacter nodosus VCS1703A 5122264 YP_001209906.1 CDS recG NC_009446.1 1053104 1055158 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM PF04851; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG complement(1053104..1055158) Dichelobacter nodosus VCS1703A 5123405 YP_001209907.1 CDS DNO_1019 NC_009446.1 1055161 1055544 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(1055161..1055544) Dichelobacter nodosus VCS1703A 5122323 YP_001209908.1 CDS spoT NC_009446.1 1055571 1057742 R identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase complement(1055571..1057742) Dichelobacter nodosus VCS1703A 5123035 YP_001209909.1 CDS rpoZ NC_009446.1 1057747 1057980 R identified by match to protein family HMM PF01192; match to protein family HMM TIGR00690; DNA-directed RNA polymerase subunit omega complement(1057747..1057980) Dichelobacter nodosus VCS1703A 5122279 YP_001209910.1 CDS DNO_1022 NC_009446.1 1058076 1058942 R identified by match to protein family HMM PF02219; methylenetetrahydrofolate reductase family protein complement(1058076..1058942) Dichelobacter nodosus VCS1703A 5122141 YP_001209911.1 CDS pdxH NC_009446.1 1058954 1059592 R identified by match to protein family HMM PF01243; match to protein family HMM TIGR00558; pyridoxamine 5'-phosphate oxidase complement(1058954..1059592) Dichelobacter nodosus VCS1703A 5122950 YP_001209912.1 CDS hemL NC_009446.1 1059593 1060873 R identified by match to protein family HMM PF00202; match to protein family HMM PF01212; match to protein family HMM TIGR00713; glutamate-1-semialdehyde-2,1-aminomutase complement(1059593..1060873) Dichelobacter nodosus VCS1703A 5123090 YP_001209913.1 CDS rpsT NC_009446.1 1061089 1061355 D identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 1061089..1061355 Dichelobacter nodosus VCS1703A 5122136 YP_001209914.1 CDS frdA NC_009446.1 1061547 1063310 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 1061547..1063310 Dichelobacter nodosus VCS1703A 5122921 YP_001209915.1 CDS frdB NC_009446.1 1063323 1064069 D identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; fumarate reductase, iron-sulfur protein 1063323..1064069 Dichelobacter nodosus VCS1703A 5122280 YP_001209916.1 CDS frdC NC_009446.1 1064071 1064463 D fumarate reductase subunit C 1064071..1064463 Dichelobacter nodosus VCS1703A 5122358 YP_001209917.1 CDS DNO_1029 NC_009446.1 1064476 1064826 D fumarate reductase, subunit D 1064476..1064826 Dichelobacter nodosus VCS1703A 5122923 YP_001209918.1 CDS DNO_1030 NC_009446.1 1064873 1065475 R hypothetical protein complement(1064873..1065475) Dichelobacter nodosus VCS1703A 5123440 YP_001209919.1 CDS DNO_1031 NC_009446.1 1065660 1066667 D identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; heptosyl transferase I 1065660..1066667 Dichelobacter nodosus VCS1703A 5122468 YP_001209920.1 CDS DNO_1032 NC_009446.1 1066780 1067463 D identified by match to protein family HMM PF02146; Sir2 family NAD-dependent deacetylase 1066780..1067463 Dichelobacter nodosus VCS1703A 5122657 YP_001209921.1 CDS DNO_1033 NC_009446.1 1067411 1067581 D hypothetical protein 1067411..1067581 Dichelobacter nodosus VCS1703A 5122170 YP_001209922.1 CDS DNO_1034 NC_009446.1 1067601 1069598 D identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease family protein 1067601..1069598 Dichelobacter nodosus VCS1703A 5122902 YP_001209923.1 CDS tkt NC_009446.1 1069608 1071608 D identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 1069608..1071608 Dichelobacter nodosus VCS1703A 5122692 YP_001209924.1 CDS pgk NC_009446.1 1071624 1072781 D identified by match to protein family HMM PF00162; phosphoglycerate kinase 1071624..1072781 Dichelobacter nodosus VCS1703A 5122225 YP_001209925.1 CDS DNO_1037 NC_009446.1 1072982 1074121 D hypothetical protein 1072982..1074121 Dichelobacter nodosus VCS1703A 5122215 YP_001209926.1 CDS intB2 NC_009446.1 1074787 1075281 R integrase B2 complement(1074787..1075281) Dichelobacter nodosus VCS1703A 5122520 YP_001209927.1 CDS toxA2 NC_009446.1 1075849 1076208 D identified by match to protein family HMM PF05015; plasmid maintenance system killer family protein ToxA2 1075849..1076208 Dichelobacter nodosus VCS1703A 5123051 YP_001209928.1 CDS vapA3 NC_009446.1 1076221 1076529 D identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapA3 1076221..1076529 Dichelobacter nodosus VCS1703A 5122129 YP_001209929.1 CDS vapB2 NC_009446.1 1076865 1077095 D identified by match to protein family HMM PF04014; virulence-associated protein VapB2 1076865..1077095 Dichelobacter nodosus VCS1703A 5122574 YP_001209930.1 CDS vapC2 NC_009446.1 1077092 1077499 D identified by match to protein family HMM PF01850; virulence-associated protein VapC2 1077092..1077499 Dichelobacter nodosus VCS1703A 5122433 YP_001209931.1 CDS vapE3 NC_009446.1 1079043 1080356 R identified by match to protein family HMM PF05272; virulence-associated protein VapE3 complement(1079043..1080356) Dichelobacter nodosus VCS1703A 5122948 YP_001209932.1 CDS vapG3 NC_009446.1 1080452 1080673 R virulence-associated protein VapG3 complement(1080452..1080673) Dichelobacter nodosus VCS1703A 5122260 YP_001209933.1 CDS intA2 NC_009446.1 1081068 1082273 R identified by match to protein family HMM PF00589; integrase A2 complement(1081068..1082273) Dichelobacter nodosus VCS1703A 5123205 YP_001209934.1 CDS pnp NC_009446.1 1082578 1084659 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase complement(1082578..1084659) Dichelobacter nodosus VCS1703A 5122352 YP_001209935.1 CDS rpsO NC_009446.1 1084678 1084944 R identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 complement(1084678..1084944) Dichelobacter nodosus VCS1703A 5122535 YP_001209936.1 CDS azu NC_009446.1 1085038 1085559 R identified by match to protein family HMM PF00127; match to protein family HMM TIGR02695; azurin complement(1085038..1085559) Dichelobacter nodosus VCS1703A 5123213 YP_001209937.1 CDS DNO_1050 NC_009446.1 1085590 1086153 R hypothetical protein complement(1085590..1086153) Dichelobacter nodosus VCS1703A 5122127 YP_001209938.1 CDS argS NC_009446.1 1086150 1087928 R identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginyl-tRNA synthetase complement(1086150..1087928) Dichelobacter nodosus VCS1703A 5123417 YP_001209939.1 CDS dusA NC_009446.1 1088111 1089118 D identified by match to protein family HMM PF01207; tRNA-dihydrouridine synthase A 1088111..1089118 Dichelobacter nodosus VCS1703A 5123022 YP_001209940.1 CDS asd NC_009446.1 1089115 1090230 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1089115..1090230 Dichelobacter nodosus VCS1703A 5122188 YP_001209941.1 CDS DNO_1054 NC_009446.1 1090391 1092283 R helicase family protein complement(1090391..1092283) Dichelobacter nodosus VCS1703A 5122963 YP_001209942.1 CDS pheS NC_009446.1 1092464 1093504 D identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase subunit alpha 1092464..1093504 Dichelobacter nodosus VCS1703A 5123164 YP_001209943.1 CDS pheT NC_009446.1 1093517 1095886 D identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 1093517..1095886 Dichelobacter nodosus VCS1703A 5123426 YP_001209944.1 CDS ihfA NC_009446.1 1095893 1096189 D identified by match to protein family HMM PF00216; match to protein family HMM TIGR00987; integration host factor subunit alpha 1095893..1096189 Dichelobacter nodosus VCS1703A 5122355 YP_001209945.1 CDS DNO_1058 NC_009446.1 1096655 1097395 R identified by match to protein family HMM PF01553; acyltransferase domain-containing protein complement(1096655..1097395) Dichelobacter nodosus VCS1703A 5123198 YP_001209946.1 CDS DNO_1059 NC_009446.1 1097392 1097937 R identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; HAD superfamily hydrolase complement(1097392..1097937) Dichelobacter nodosus VCS1703A 5122819 YP_001209947.1 CDS DNO_1061 NC_009446.1 1098017 1099450 D identified by match to protein family HMM PF00583; hypothetical protein 1098017..1099450 Dichelobacter nodosus VCS1703A 5123061 YP_001209948.1 CDS cca NC_009446.1 1099447 1100520 R identified by match to protein family HMM PF01743; tRNA nucleotidyltransferase complement(1099447..1100520) Dichelobacter nodosus VCS1703A 5122328 YP_001209949.1 CDS DNO_1062 NC_009446.1 1100557 1101465 D identified by match to protein family HMM PF01513; ATP-NAD kinase 1100557..1101465 Dichelobacter nodosus VCS1703A 5123330 YP_001209950.1 CDS recN NC_009446.1 1101478 1103136 D identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 1101478..1103136 Dichelobacter nodosus VCS1703A 5123261 YP_001209951.1 CDS DNO_1064 NC_009446.1 1103183 1103515 D SmpA/OmlA family lipoprotein 1103183..1103515 Dichelobacter nodosus VCS1703A 5122471 YP_001209952.1 CDS serS NC_009446.1 1103529 1104809 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 1103529..1104809 Dichelobacter nodosus VCS1703A 5123023 YP_001209953.1 CDS phoU NC_009446.1 1104849 1105544 D identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate uptake regulator PhoU 1104849..1105544 Dichelobacter nodosus VCS1703A 5122898 YP_001209954.1 CDS DNO_1067 NC_009446.1 1105557 1106171 D identified by match to protein family HMM PF00877; hypothetical protein 1105557..1106171 Dichelobacter nodosus VCS1703A 5123105 YP_001209955.1 CDS DNO_1068 NC_009446.1 1106171 1108162 D hypothetical protein 1106171..1108162 Dichelobacter nodosus VCS1703A 5122802 YP_001209956.1 CDS gcvP NC_009446.1 1108215 1111046 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(1108215..1111046) Dichelobacter nodosus VCS1703A 5123302 YP_001209957.1 CDS gcvH NC_009446.1 1111049 1111417 R identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system protein H complement(1111049..1111417) Dichelobacter nodosus VCS1703A 5123312 YP_001209958.1 CDS adk NC_009446.1 1111567 1112103 D identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351; adenylate kinase 1111567..1112103 Dichelobacter nodosus VCS1703A 5123250 YP_001209959.1 CDS aroC NC_009446.1 1112114 1113181 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1112114..1113181 Dichelobacter nodosus VCS1703A 5122447 YP_001209960.1 CDS arcC NC_009446.1 1113255 1114196 R this enzyme from Pyrococcus has carbamoyl phosphate synthetase activity even though the enzyme shows sequence and structural similarity to carbamate kinase; this enzyme using carbate and ATP to synthesize carbamoyl phosphate which may be a favorable reaction at the extreme temperatures these organisms live under; carbamate kinase-like carbamoyl phosphate synthetase complement(1113255..1114196) Dichelobacter nodosus VCS1703A 5123229 YP_001209961.1 CDS argF-1 NC_009446.1 1114270 1115277 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658; ornithine carbamoyltransferase complement(1114270..1115277) Dichelobacter nodosus VCS1703A 5122761 YP_001209962.1 CDS arcA NC_009446.1 1115345 1116592 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(1115345..1116592) Dichelobacter nodosus VCS1703A 5122217 YP_001209963.1 CDS folB NC_009446.1 1116804 1117160 R identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase complement(1116804..1117160) Dichelobacter nodosus VCS1703A 5122839 YP_001209964.1 CDS DNO_1077 NC_009446.1 1117266 1117874 D identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023; hypothetical protein 1117266..1117874 Dichelobacter nodosus VCS1703A 5122178 YP_001209965.1 CDS rpoD NC_009446.1 1117910 1119781 R identified by match to protein family HMM PF00140; match to protein family HMM PF03979; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04546; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor complement(1117910..1119781) Dichelobacter nodosus VCS1703A 5122738 YP_001209966.1 CDS dnaG NC_009446.1 1119882 1121537 R identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase complement(1119882..1121537) Dichelobacter nodosus VCS1703A 5122227 YP_001209967.1 CDS DNO_1080 NC_009446.1 1121549 1122001 R identified by match to protein family HMM PF02637; GatB-Yqey domain-containing protein complement(1121549..1122001) Dichelobacter nodosus VCS1703A 5122759 YP_001209968.1 CDS rpsU NC_009446.1 1122004 1122219 R identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; 30S ribosomal protein S21 complement(1122004..1122219) Dichelobacter nodosus VCS1703A 5122445 YP_001209969.1 CDS DNO_1082 NC_009446.1 1122397 1122960 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein complement(1122397..1122960) Dichelobacter nodosus VCS1703A 5123111 YP_001209970.1 CDS DNO_1083 NC_009446.1 1123005 1124279 R identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA methyltransferase complement(1123005..1124279) Dichelobacter nodosus VCS1703A 5123315 YP_001209971.1 CDS aroB NC_009446.1 1124644 1125753 R identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase complement(1124644..1125753) Dichelobacter nodosus VCS1703A 5123173 YP_001209972.1 CDS DNO_1085 NC_009446.1 1125755 1126399 R identified by match to protein family HMM PF00484; carbonic anhydrase complement(1125755..1126399) Dichelobacter nodosus VCS1703A 5122816 YP_001209973.1 CDS DNO_1086 NC_009446.1 1126402 1127652 R identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283; lytic murein transglycosylase family protein complement(1126402..1127652) Dichelobacter nodosus VCS1703A 5122522 YP_001209974.1 CDS DNO_1088 NC_009446.1 1128034 1128837 R identified by match to protein family HMM PF01171; match to protein family HMM PF06508; adenine nucleotide alpha hydrolase ATP-binding family protein complement(1128034..1128837) Dichelobacter nodosus VCS1703A 5122962 YP_001209975.1 CDS accA NC_009446.1 1129304 1130263 R identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513; acetyl-CoA carboxylase, alpha subunit complement(1129304..1130263) Dichelobacter nodosus VCS1703A 5123180 YP_001209976.1 CDS DNO_1092 NC_009446.1 1130266 1130709 R hypothetical protein complement(1130266..1130709) Dichelobacter nodosus VCS1703A 5122339 YP_001209977.1 CDS chpA NC_009446.1 1130702 1138366 R identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; chemotaxis protein ChpA complement(1130702..1138366) Dichelobacter nodosus VCS1703A 5123065 YP_001209978.1 CDS pilJ NC_009446.1 1138426 1139736 R identified by match to protein family HMM PF00015; twitching motility protein PilJ complement(1138426..1139736) Dichelobacter nodosus VCS1703A 5122393 YP_001209979.1 CDS DNO_1095 NC_009446.1 1139751 1140272 R hypothetical protein complement(1139751..1140272) Dichelobacter nodosus VCS1703A 5122834 YP_001209980.1 CDS pilH NC_009446.1 1140269 1140631 R identified by match to protein family HMM PF00072; twitching motility regulator PilH complement(1140269..1140631) Dichelobacter nodosus VCS1703A 5123337 YP_001209981.1 CDS pilG NC_009446.1 1140668 1141051 R identified by match to protein family HMM PF00072; twitching motility regulator PilG complement(1140668..1141051) Dichelobacter nodosus VCS1703A 5123254 YP_001209982.1 CDS DNO_1098 NC_009446.1 1141153 1141542 R identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; hypothetical protein complement(1141153..1141542) Dichelobacter nodosus VCS1703A 5123379 YP_001209983.1 CDS trxB NC_009446.1 1141636 1142583 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin reductase 1141636..1142583 Dichelobacter nodosus VCS1703A 5123217 YP_001209984.1 CDS lpdA NC_009446.1 1142610 1144358 D identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoamide dehydrogenase 1142610..1144358 Dichelobacter nodosus VCS1703A 5123398 YP_001209985.1 CDS psd NC_009446.1 1144443 1145276 D identified by match to protein family HMM PF02666; match to protein family HMM TIGR00163; phosphatidylserine decarboxylase 1144443..1145276 Dichelobacter nodosus VCS1703A 5123262 YP_001209986.1 CDS rnhA NC_009446.1 1145257 1145709 D identified by match to protein family HMM PF00075; RNase H 1145257..1145709 Dichelobacter nodosus VCS1703A 5123076 YP_001209987.1 CDS brnQ NC_009446.1 1145728 1147071 R identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein complement(1145728..1147071) Dichelobacter nodosus VCS1703A 5122905 YP_001209988.1 CDS DNO_1104 NC_009446.1 1147235 1148053 R hypothetical protein complement(1147235..1148053) Dichelobacter nodosus VCS1703A 5123361 YP_001209989.1 CDS DNO_1105 NC_009446.1 1148225 1148446 D identified by match to protein family HMM PF04325; hypothetical protein 1148225..1148446 Dichelobacter nodosus VCS1703A 5122910 YP_001209990.1 CDS ppk NC_009446.1 1148544 1150712 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1148544..1150712 Dichelobacter nodosus VCS1703A 5122629 YP_001209991.1 CDS DNO_1107 NC_009446.1 1150732 1151550 D identified by match to protein family HMM PF01145; SPFH domain-containing protein 1150732..1151550 Dichelobacter nodosus VCS1703A 5122797 YP_001209992.1 CDS glnS NC_009446.1 1151650 1153299 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1151650..1153299 Dichelobacter nodosus VCS1703A 5123354 YP_001209993.1 CDS DNO_1109 NC_009446.1 1153350 1153790 D identified by match to protein family HMM PF02566; OsmC-like family protein 1153350..1153790 Dichelobacter nodosus VCS1703A 5123280 YP_001209994.1 CDS DNO_1110 NC_009446.1 1153906 1157613 D identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857; phosphoribosylformylglycinamidine synthase 1153906..1157613 Dichelobacter nodosus VCS1703A 5122177 YP_001209995.1 CDS DNO_1111 NC_009446.1 1157719 1158696 D identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367; K+-dependent Na+-Ca+ exchanger related family protein 1157719..1158696 Dichelobacter nodosus VCS1703A 5122754 YP_001209996.1 CDS purC NC_009446.1 1158701 1159420 D identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; phosphoribosylaminoimidazole-succinocarboxamide synthase 1158701..1159420 Dichelobacter nodosus VCS1703A 5123456 YP_001209997.1 CDS purM NC_009446.1 1159420 1160415 D identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878; phosphoribosylformylglycinamidine cyclo-ligase 1159420..1160415 Dichelobacter nodosus VCS1703A 5122533 YP_001209998.1 CDS dapA NC_009446.1 1160507 1161400 D identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase 1160507..1161400 Dichelobacter nodosus VCS1703A 5122534 YP_001209999.1 CDS DNO_1115 NC_009446.1 1161418 1162485 D lipoprotein 1161418..1162485 Dichelobacter nodosus VCS1703A 5122680 YP_001210000.1 CDS mutL NC_009446.1 1162492 1164264 D identified by match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM PF08676; match to protein family HMM TIGR00585; DNA mismatch repair protein MutL 1162492..1164264 Dichelobacter nodosus VCS1703A 5122443 YP_001210001.1 CDS miaA NC_009446.1 1164264 1165220 D identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase 1164264..1165220 Dichelobacter nodosus VCS1703A 5122642 YP_001210002.1 CDS aspS NC_009446.1 1165572 1167359 D identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartyl-tRNA synthetase 1165572..1167359 Dichelobacter nodosus VCS1703A 5123020 YP_001210003.1 CDS rplI NC_009446.1 1167429 1167878 R identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 complement(1167429..1167878) Dichelobacter nodosus VCS1703A 5122449 YP_001210004.1 CDS rpsR NC_009446.1 1167891 1168106 R identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 complement(1167891..1168106) Dichelobacter nodosus VCS1703A 5123247 YP_001210005.1 CDS rpsF NC_009446.1 1168117 1168443 R identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 complement(1168117..1168443) Dichelobacter nodosus VCS1703A 5123068 YP_001210006.1 CDS rnd NC_009446.1 1168654 1169721 D identified by match to protein family HMM PF01612; ribonuclease D 1168654..1169721 Dichelobacter nodosus VCS1703A 5122686 YP_001210007.1 CDS coaE NC_009446.1 1169708 1170301 R identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase complement(1169708..1170301) Dichelobacter nodosus VCS1703A 5123349 YP_001210008.1 CDS fimP NC_009446.1 1170298 1171158 R identified by match to protein family HMM PF01478; match to protein family HMM PF06750; type IV prepilin peptidase complement(1170298..1171158) Dichelobacter nodosus VCS1703A 5122674 YP_001210009.1 CDS fimO NC_009446.1 1171158 1172381 R identified by match to protein family HMM PF00482; type IV fimbrial biogenesis protein FimO complement(1171158..1172381) Dichelobacter nodosus VCS1703A 5122925 YP_001210010.1 CDS fimN NC_009446.1 1172401 1174095 R identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538; type IV fimbrial biogenesis nucleotide binding protein FimN complement(1172401..1174095) Dichelobacter nodosus VCS1703A 5122239 YP_001210011.1 CDS DNO_1127 NC_009446.1 1174092 1174808 R identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate synthetase, component II complement(1174092..1174808) Dichelobacter nodosus VCS1703A 5122620 YP_001210012.1 CDS recO NC_009446.1 1174756 1175445 D hypothetical protein 1174756..1175445 Dichelobacter nodosus VCS1703A 5122180 YP_001210013.1 CDS rplM NC_009446.1 1175668 1176099 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1175668..1176099 Dichelobacter nodosus VCS1703A 5122274 YP_001210014.1 CDS rpsI NC_009446.1 1176109 1176498 D identified by match to protein family HMM PF00380; 30S ribosomal protein S9 1176109..1176498 Dichelobacter nodosus VCS1703A 5122376 YP_001210015.1 CDS xerD NC_009446.1 1176567 1177460 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD complement(1176567..1177460) Dichelobacter nodosus VCS1703A 5123434 YP_001210016.1 CDS DNO_1132 NC_009446.1 1177536 1178867 D hypothetical protein 1177536..1178867 Dichelobacter nodosus VCS1703A 5122499 YP_001210017.1 CDS DNO_1133 NC_009446.1 1178864 1179313 D hypothetical protein 1178864..1179313 Dichelobacter nodosus VCS1703A 5123383 YP_001210018.1 CDS mutM NC_009446.1 1179306 1180124 D identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; match to protein family HMM TIGR00577; formamidopyrimidine-DNA glycosylase 1179306..1180124 Dichelobacter nodosus VCS1703A 5122877 YP_001210019.1 CDS DNO_1134 NC_009446.1 1180081 1181100 R identified by match to protein family HMM PF01142; TruD family pseudouridine synthase complement(1180081..1181100) Dichelobacter nodosus VCS1703A 5122378 YP_001210020.1 CDS DNO_1136 NC_009446.1 1181108 1183228 R identified by match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase complement(1181108..1183228) Dichelobacter nodosus VCS1703A 5122891 YP_001210021.1 CDS proS NC_009446.1 1183286 1185004 R identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF04073; match to protein family HMM TIGR00409; prolyl-tRNA synthetase complement(1183286..1185004) Dichelobacter nodosus VCS1703A 5122191 YP_001210022.1 CDS DNO_1138 NC_009446.1 1185174 1185674 R hypothetical protein complement(1185174..1185674) Dichelobacter nodosus VCS1703A 5122881 YP_001210023.1 CDS DNO_1139 NC_009446.1 1185811 1186383 R hypothetical protein complement(1185811..1186383) Dichelobacter nodosus VCS1703A 5123086 YP_001210024.1 CDS glmU NC_009446.1 1186433 1187833 R identified by match to protein family HMM PF00132; match to protein family HMM PF00483; match to protein family HMM TIGR01173; UDP-N-acetylglucosamine pyrophosphorylase complement(1186433..1187833) Dichelobacter nodosus VCS1703A 5122737 YP_001210025.1 CDS atpC NC_009446.1 1187959 1188390 R identified by match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon complement(1187959..1188390) Dichelobacter nodosus VCS1703A 5122369 YP_001210026.1 CDS atpD NC_009446.1 1188402 1189793 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1188402..1189793) Dichelobacter nodosus VCS1703A 5122172 YP_001210027.1 CDS atpG NC_009446.1 1189816 1190685 R identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma complement(1189816..1190685) Dichelobacter nodosus VCS1703A 5122876 YP_001210028.1 CDS atpA NC_009446.1 1190695 1192236 R identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha complement(1190695..1192236) Dichelobacter nodosus VCS1703A 5122322 YP_001210029.1 CDS atpH NC_009446.1 1192238 1192792 R identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1 subunit delta complement(1192238..1192792) Dichelobacter nodosus VCS1703A 5123201 YP_001210030.1 CDS atpF NC_009446.1 1192794 1193264 R identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0 subunit B complement(1192794..1193264) Dichelobacter nodosus VCS1703A 5122850 YP_001210031.1 CDS atpE NC_009446.1 1193301 1193588 R identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260; ATP synthase F0 subunit C complement(1193301..1193588) Dichelobacter nodosus VCS1703A 5123331 YP_001210032.1 CDS atpB NC_009446.1 1193624 1194415 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(1193624..1194415) Dichelobacter nodosus VCS1703A 5122789 YP_001210033.1 CDS DNO_1149 NC_009446.1 1194816 1195685 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family partitioning protein complement(1194816..1195685) Dichelobacter nodosus VCS1703A 5123266 YP_001210034.1 CDS gidB NC_009446.1 1195720 1196355 R identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; glucose inhibited division protein GidB complement(1195720..1196355) Dichelobacter nodosus VCS1703A 5122359 YP_001210035.1 CDS DNO_1151 NC_009446.1 1196348 1197829 R identified by match to protein family HMM PF00883; leucine aminopeptidase complement(1196348..1197829) Dichelobacter nodosus VCS1703A 5122168 YP_001210036.1 CDS DNO_1152 NC_009446.1 1197957 1199006 D identified by match to protein family HMM PF03739; hypothetical protein 1197957..1199006 Dichelobacter nodosus VCS1703A 5122448 YP_001210037.1 CDS DNO_1153 NC_009446.1 1199003 1200052 D identified by match to protein family HMM PF03739; hypothetical protein 1199003..1200052 Dichelobacter nodosus VCS1703A 5122934 YP_001210038.1 CDS DNO_1154 NC_009446.1 1200123 1200362 R hypothetical protein complement(1200123..1200362) Dichelobacter nodosus VCS1703A 5122741 YP_001210039.1 CDS DNO_1155 NC_009446.1 1200411 1201931 R lipoprotein complement(1200411..1201931) Dichelobacter nodosus VCS1703A 5123274 YP_001210040.1 CDS DNO_1156 NC_009446.1 1202011 1202127 R hypothetical protein complement(1202011..1202127) Dichelobacter nodosus VCS1703A 5122361 YP_001210041.1 CDS DNO_1157 NC_009446.1 1202175 1203980 D the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 1202175..1203980 Dichelobacter nodosus VCS1703A 5122742 YP_001210042.1 CDS DNO_1158 NC_009446.1 1204040 1204384 D identified by match to protein family HMM PF04342; hypothetical protein 1204040..1204384 Dichelobacter nodosus VCS1703A 5122315 YP_001210043.1 CDS DNO_1159 NC_009446.1 1204402 1206606 D identified by match to protein family HMM PF00575; transcriptional accessory protein 1204402..1206606 Dichelobacter nodosus VCS1703A 5123155 YP_001210044.1 CDS dam NC_009446.1 1206603 1207430 D identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571; DNA adenine methylase 1206603..1207430 Dichelobacter nodosus VCS1703A 5123298 YP_001210045.1 CDS DNO_1160 NC_009446.1 1207427 1208068 R hypothetical protein complement(1207427..1208068) Dichelobacter nodosus VCS1703A 5123375 YP_001210046.1 CDS DNO_1162 NC_009446.1 1208219 1208782 D identified by match to protein family HMM PF02632; BioY family protein 1208219..1208782 Dichelobacter nodosus VCS1703A 5123096 YP_001210047.1 CDS trmA NC_009446.1 1208820 1209905 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(1208820..1209905) Dichelobacter nodosus VCS1703A 5123172 YP_001210048.1 CDS DNO_1164 NC_009446.1 1209909 1210775 R hypothetical protein complement(1209909..1210775) Dichelobacter nodosus VCS1703A 5122375 YP_001210049.1 CDS recB NC_009446.1 1210835 1214431 D identified by match to protein family HMM PF00580; exonuclease V, beta subunit 1210835..1214431 Dichelobacter nodosus VCS1703A 5122992 YP_001210050.1 CDS DNO_1166 NC_009446.1 1214476 1214832 R hypothetical protein complement(1214476..1214832) Dichelobacter nodosus VCS1703A 5122970 YP_001210051.1 CDS aprV2 NC_009446.1 1215097 1216902 R identified by match to protein family HMM PF00082; match to protein family HMM PF01483; acidic extracellular subtilisin-like protease AprV2 complement(1215097..1216902) Dichelobacter nodosus VCS1703A 5122268 YP_001210052.1 CDS DNO_1168 NC_009446.1 1217131 1217226 R hypothetical protein complement(1217131..1217226) Dichelobacter nodosus VCS1703A 5122421 YP_001210053.1 CDS DNO_1169 NC_009446.1 1217334 1217441 R hypothetical protein complement(1217334..1217441) Dichelobacter nodosus VCS1703A 5122491 YP_001210054.1 CDS DNO_1170 NC_009446.1 1217442 1217999 R identified by match to protein family HMM PF07719; lipoprotein complement(1217442..1217999) Dichelobacter nodosus VCS1703A 5122427 YP_001210055.1 CDS pal NC_009446.1 1218024 1218608 R identified by match to protein family HMM PF00691; match to protein family HMM TIGR02802; OmpA domain-containing protein complement(1218024..1218608) Dichelobacter nodosus VCS1703A 5122387 YP_001210056.1 CDS tolB NC_009446.1 1218632 1219906 R identified by match to protein family HMM PF04052; match to protein family HMM PF07676; match to protein family HMM TIGR02800; TolB protein complement(1218632..1219906) Dichelobacter nodosus VCS1703A 5123259 YP_001210057.1 CDS tolA NC_009446.1 1220043 1221221 R TolA protein complement(1220043..1221221) Dichelobacter nodosus VCS1703A 5122297 YP_001210058.1 CDS tolR NC_009446.1 1221214 1221675 R identified by match to protein family HMM PF02472; TolR protein complement(1221214..1221675) Dichelobacter nodosus VCS1703A 5123441 YP_001210059.1 CDS tolQ NC_009446.1 1221688 1222371 R identified by match to protein family HMM PF01618; TolQ protein complement(1221688..1222371) Dichelobacter nodosus VCS1703A 5122165 YP_001210060.1 CDS ruvB NC_009446.1 1222406 1223422 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1222406..1223422) Dichelobacter nodosus VCS1703A 5122137 YP_001210061.1 CDS ruvA NC_009446.1 1223419 1224033 R identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction ATP-dependent DNA helicase RuvA complement(1223419..1224033) Dichelobacter nodosus VCS1703A 5122884 YP_001210062.1 CDS ruvC NC_009446.1 1224030 1224560 R identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC complement(1224030..1224560) Dichelobacter nodosus VCS1703A 5122781 YP_001210063.1 CDS DNO_1179 NC_009446.1 1224562 1225296 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(1224562..1225296) Dichelobacter nodosus VCS1703A 5122184 YP_001210064.1 CDS pstS NC_009446.1 1225571 1226578 D phosphate binding family protein 1225571..1226578 Dichelobacter nodosus VCS1703A 5122333 YP_001210065.1 CDS DNO_1181 NC_009446.1 1226698 1228071 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; ABC-type phosphate-dependent transport system family protein 1226698..1228071 Dichelobacter nodosus VCS1703A 5122968 YP_001210066.1 CDS DNO_1182 NC_009446.1 1228080 1229396 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; ABC-type phosphate-dependent transport system family protein 1228080..1229396 Dichelobacter nodosus VCS1703A 5123369 YP_001210067.1 CDS pstB NC_009446.1 1229402 1230271 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; ABC-type phosphate transporter ATP-binding protein 1229402..1230271 Dichelobacter nodosus VCS1703A 5122886 YP_001210068.1 CDS greA NC_009446.1 1230475 1230957 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 1230475..1230957 Dichelobacter nodosus VCS1703A 5122371 YP_001210069.1 CDS DNO_1185 NC_009446.1 1231150 1231329 D hypothetical protein 1231150..1231329 Dichelobacter nodosus VCS1703A 5122590 YP_001210070.1 CDS DNO_1186 NC_009446.1 1231313 1232863 D identified by match to protein family HMM PF07690; tripeptide permease family protein 1231313..1232863 Dichelobacter nodosus VCS1703A 5122965 YP_001210071.1 CDS DNO_1187 NC_009446.1 1232907 1234667 R identified by match to protein family HMM PF02080; match to protein family HMM PF03600; hypothetical protein complement(1232907..1234667) Dichelobacter nodosus VCS1703A 5122411 YP_001210072.1 CDS DNO_1188 NC_009446.1 1234781 1236034 R hypothetical protein complement(1234781..1236034) Dichelobacter nodosus VCS1703A 5122844 YP_001210073.1 CDS DNO_1189 NC_009446.1 1236027 1236626 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1236027..1236626) Dichelobacter nodosus VCS1703A 5122577 YP_001210074.1 CDS DNO_1190 NC_009446.1 1236759 1238072 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; HlyD family secretion protein 1236759..1238072 Dichelobacter nodosus VCS1703A 5122451 YP_001210075.1 CDS acrF NC_009446.1 1238098 1241238 D identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; mutidrug efflux protein 1238098..1241238 Dichelobacter nodosus VCS1703A 5122908 YP_001210076.1 CDS DNO_1192 NC_009446.1 1241243 1242646 D identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane multidrug efflux protein 1241243..1242646 Dichelobacter nodosus VCS1703A 5123043 YP_001210077.1 CDS DNO_1194 NC_009446.1 1243028 1243909 R hypothetical protein complement(1243028..1243909) Dichelobacter nodosus VCS1703A 5123219 YP_001210078.1 CDS DNO_1195 NC_009446.1 1243906 1244307 R hypothetical protein complement(1243906..1244307) Dichelobacter nodosus VCS1703A 5122734 YP_001210079.1 CDS iscS NC_009446.1 1244308 1245456 R identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase complement(1244308..1245456) Dichelobacter nodosus VCS1703A 5123157 YP_001210080.1 CDS gcvT NC_009446.1 1245574 1246671 R identified by match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR00528; glycine cleavage system T protein complement(1245574..1246671) Dichelobacter nodosus VCS1703A 5122362 YP_001210081.1 CDS infA NC_009446.1 1246882 1247100 D identified by match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008; translation initiation factor IF-1 1246882..1247100 Dichelobacter nodosus VCS1703A 5122249 YP_001210082.1 CDS DNO_1199 NC_009446.1 1247157 1247648 R hypothetical protein complement(1247157..1247648) Dichelobacter nodosus VCS1703A 5122640 YP_001210083.1 CDS pyk NC_009446.1 1247658 1249112 R identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase complement(1247658..1249112) Dichelobacter nodosus VCS1703A 5122716 YP_001210084.1 CDS DNO_1201 NC_009446.1 1249123 1249704 R identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase complement(1249123..1249704) Dichelobacter nodosus VCS1703A 5122196 YP_001210085.1 CDS ampD NC_009446.1 1249808 1250392 D identified by match to protein family HMM PF01510; N-acetyl-anhydromuranmyl-L-alanine amidase 1249808..1250392 Dichelobacter nodosus VCS1703A 5122648 YP_001210086.1 CDS DNO_1203 NC_009446.1 1250434 1251303 D hypothetical protein 1250434..1251303 Dichelobacter nodosus VCS1703A 5122628 YP_001210087.1 CDS DNO_1204 NC_009446.1 1251336 1251848 D identified by match to protein family HMM PF02620; hypothetical protein 1251336..1251848 Dichelobacter nodosus VCS1703A 5122752 YP_001210088.1 CDS rpmF NC_009446.1 1251849 1252052 D identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 1251849..1252052 Dichelobacter nodosus VCS1703A 5123281 YP_001210089.1 CDS plsX NC_009446.1 1252075 1253112 D identified by match to protein family HMM PF02504; match to protein family HMM TIGR00182; fatty acid-phospholipid synthesis protein PlsX 1252075..1253112 Dichelobacter nodosus VCS1703A 5122895 YP_001210090.1 CDS fabH NC_009446.1 1253127 1254095 D identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; 3-oxoacyl-(acyl-carrier-protein) synthase III 1253127..1254095 Dichelobacter nodosus VCS1703A 5122835 YP_001210091.1 CDS fabD NC_009446.1 1254109 1255041 D identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 1254109..1255041 Dichelobacter nodosus VCS1703A 5122743 YP_001210092.1 CDS fabG NC_009446.1 1255046 1255780 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; match to protein family HMM TIGR01830; 3-oxoacyl-(acyl-carrier-protein) reductase 1255046..1255780 Dichelobacter nodosus VCS1703A 5122592 YP_001210093.1 CDS acpP NC_009446.1 1255845 1256075 D identified by match to protein family HMM PF00550; match to protein family HMM TIGR00517; acyl carrier protein 1255845..1256075 Dichelobacter nodosus VCS1703A 5123293 YP_001210094.1 CDS fabF NC_009446.1 1256240 1257505 D identified by match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150; 3-oxoacyl-(acyl-carrier-protein) synthase II 1256240..1257505 Dichelobacter nodosus VCS1703A 5122417 YP_001210095.1 CDS DNO_1212 NC_009446.1 1257502 1258515 D identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; aminodeoxychorismate lyase family protein 1257502..1258515 Dichelobacter nodosus VCS1703A 5122560 YP_001210096.1 CDS tmk NC_009446.1 1258505 1259116 D identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; thymidylate kinase 1258505..1259116 Dichelobacter nodosus VCS1703A 5122751 YP_001210097.1 CDS holB NC_009446.1 1259113 1260063 D identified by match to protein family HMM PF00627; DNA polymerase III subunit delta' 1259113..1260063 Dichelobacter nodosus VCS1703A 5122562 YP_001210098.1 CDS pilZ NC_009446.1 1260060 1260422 D type IV fimbrial biogenesis protein PilZ 1260060..1260422 Dichelobacter nodosus VCS1703A 5123055 YP_001210099.1 CDS DNO_1216 NC_009446.1 1260598 1261626 D identified by match to protein family HMM PF03741; TerC family protein 1260598..1261626 Dichelobacter nodosus VCS1703A 5122423 YP_001210100.1 CDS gshA NC_009446.1 1261632 1263170 R identified by match to protein family HMM PF04262; match to protein family HMM TIGR01434; glutamate--cysteine ligase complement(1261632..1263170) Dichelobacter nodosus VCS1703A 5122277 YP_001210101.1 CDS gshB NC_009446.1 1263258 1264205 D identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM PF08443; match to protein family HMM TIGR01380; glutathione synthetase 1263258..1264205 Dichelobacter nodosus VCS1703A 5122688 YP_001210102.1 CDS DNO_1219 NC_009446.1 1264393 1264518 D hypothetical protein 1264393..1264518 Dichelobacter nodosus VCS1703A 5122858 YP_001210103.1 CDS pgl NC_009446.1 1264955 1265635 R identified by match to protein family HMM TIGR01198; 6-phosphogluconolactonase complement(1264955..1265635) Dichelobacter nodosus VCS1703A 5123092 YP_001210104.1 CDS zwf NC_009446.1 1265636 1267105 R identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871; glucose-6-phosphate 1-dehydrogenase complement(1265636..1267105) Dichelobacter nodosus VCS1703A 5123062 YP_001210105.1 CDS DNO_1224 NC_009446.1 1267137 1267832 R hypothetical protein complement(1267137..1267832) Dichelobacter nodosus VCS1703A 5122204 YP_001210106.1 CDS DNO_1225 NC_009446.1 1267630 1268832 R identified by match to protein family HMM PF04536; hypothetical protein complement(1267630..1268832) Dichelobacter nodosus VCS1703A 5122652 YP_001210107.1 CDS DNO_1226 NC_009446.1 1268849 1269454 R identified by match to protein family HMM PF04011; lipoprotein complement(1268849..1269454) Dichelobacter nodosus VCS1703A 5123428 YP_001210108.1 CDS DNO_1227 NC_009446.1 1269634 1270047 D identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1269634..1270047 Dichelobacter nodosus VCS1703A 5123168 YP_001210109.1 CDS DNO_1228 NC_009446.1 1270088 1271335 D identified by match to protein family HMM PF02687; ABC-type lipoprotein releasing system protein LolC 1270088..1271335 Dichelobacter nodosus VCS1703A 5122662 YP_001210110.1 CDS DNO_1229 NC_009446.1 1271328 1272026 D identified by match to protein family HMM PF00005; lipoprotein releasing system ATP-binding protein LolD 1271328..1272026 Dichelobacter nodosus VCS1703A 5123110 YP_001210111.1 CDS DNO_1230 NC_009446.1 1272077 1272361 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence ComEA family protein complement(1272077..1272361) Dichelobacter nodosus VCS1703A 5123377 YP_001210112.1 CDS gnd NC_009446.1 1277880 1279322 R identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00873; 6-phosphogluconate dehydrogenase complement(1277880..1279322) Dichelobacter nodosus VCS1703A 5122407 YP_001210113.1 CDS folP NC_009446.1 1279319 1280170 R identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase complement(1279319..1280170) Dichelobacter nodosus VCS1703A 5122576 YP_001210114.1 CDS ftsH NC_009446.1 1280170 1282092 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent protease FtsH complement(1280170..1282092) Dichelobacter nodosus VCS1703A 5122605 YP_001210115.1 CDS rrmJ NC_009446.1 1282125 1282757 R identified by match to protein family HMM PF01728; 23S rRNA methyltransferase complement(1282125..1282757) Dichelobacter nodosus VCS1703A 5122456 YP_001210116.1 CDS DNO_1240 NC_009446.1 1282806 1283102 D identified by match to protein family HMM PF01985; YhbY family protein 1282806..1283102 Dichelobacter nodosus VCS1703A 5123011 YP_001210117.1 CDS DNO_1241 NC_009446.1 1283149 1284618 R lipoprotein complement(1283149..1284618) Dichelobacter nodosus VCS1703A 5122929 YP_001210118.1 CDS DNO_1242 NC_009446.1 1284630 1284776 R hypothetical protein complement(1284630..1284776) Dichelobacter nodosus VCS1703A 5122658 YP_001210119.1 CDS DNO_1243 NC_009446.1 1284856 1285323 R identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein complement(1284856..1285323) Dichelobacter nodosus VCS1703A 5123031 YP_001210120.1 CDS phoH NC_009446.1 1285304 1286296 R identified by match to protein family HMM PF02562; phospahte starvation induced protein PhoH complement(1285304..1286296) Dichelobacter nodosus VCS1703A 5122426 YP_001210121.1 CDS miaB NC_009446.1 1286381 1287751 R identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-i(6)A37 thiotransferase enzyme MiaB complement(1286381..1287751) Dichelobacter nodosus VCS1703A 5122130 YP_001210122.1 CDS DNO_1246 NC_009446.1 1287818 1288327 R identified by match to protein family HMM PF08238; hypothetical protein complement(1287818..1288327) Dichelobacter nodosus VCS1703A 5122181 YP_001210123.1 CDS trmB NC_009446.1 1288339 1289007 R identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase complement(1288339..1289007) Dichelobacter nodosus VCS1703A 5122614 YP_001210124.1 CDS DNO_1248 NC_009446.1 1289019 1289807 R identified by match to protein family HMM PF02649; hypothetical protein complement(1289019..1289807) Dichelobacter nodosus VCS1703A 5123066 YP_001210125.1 CDS hemH NC_009446.1 1289903 1290940 R identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109; ferrochelatase complement(1289903..1290940) Dichelobacter nodosus VCS1703A 5122670 YP_001210126.1 CDS rplQ NC_009446.1 1291005 1291376 R identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; 50S ribosomal protein L17 complement(1291005..1291376) Dichelobacter nodosus VCS1703A 5123021 YP_001210127.1 CDS rpoA NC_009446.1 1291403 1292365 R identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase subunit alpha complement(1291403..1292365) Dichelobacter nodosus VCS1703A 5123358 YP_001210128.1 CDS rpsD NC_009446.1 1292397 1293017 R identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 complement(1292397..1293017) Dichelobacter nodosus VCS1703A 5122768 YP_001210129.1 CDS rpsK NC_009446.1 1293033 1293431 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(1293033..1293431) Dichelobacter nodosus VCS1703A 5122559 YP_001210130.1 CDS rpsM NC_009446.1 1293449 1293805 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(1293449..1293805) Dichelobacter nodosus VCS1703A 5123256 YP_001210131.1 CDS secY NC_009446.1 1293915 1295243 R identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase subunit SecY complement(1293915..1295243) Dichelobacter nodosus VCS1703A 5122637 YP_001210132.1 CDS rplO NC_009446.1 1295272 1295706 R identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 complement(1295272..1295706) Dichelobacter nodosus VCS1703A 5123435 YP_001210133.1 CDS rpmD NC_009446.1 1295709 1295894 R identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308; 50S ribosomal protein L30 complement(1295709..1295894) Dichelobacter nodosus VCS1703A 5122593 YP_001210134.1 CDS rpsE NC_009446.1 1295884 1296399 R identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 complement(1295884..1296399) Dichelobacter nodosus VCS1703A 5122345 YP_001210135.1 CDS rplR NC_009446.1 1296409 1296765 R identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 complement(1296409..1296765) Dichelobacter nodosus VCS1703A 5122244 YP_001210136.1 CDS rplF NC_009446.1 1296781 1297314 R identified by match to protein family HMM PF00347; 50S ribosomal protein L6 complement(1296781..1297314) Dichelobacter nodosus VCS1703A 5122529 YP_001210137.1 CDS rpsH NC_009446.1 1297327 1297716 R identified by match to protein family HMM PF00410; 30S ribosomal protein S8 complement(1297327..1297716) Dichelobacter nodosus VCS1703A 5123442 YP_001210138.1 CDS rpsN NC_009446.1 1297787 1298095 R identified by match to protein family HMM PF00253; 30S ribosomal protein S14 complement(1297787..1298095) Dichelobacter nodosus VCS1703A 5122144 YP_001210139.1 CDS rplE NC_009446.1 1298100 1298639 R identified by match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 complement(1298100..1298639) Dichelobacter nodosus VCS1703A 5122542 YP_001210140.1 CDS rplX NC_009446.1 1298647 1298961 R identified by match to protein family HMM TIGR01079; 50S ribosomal protein L24 complement(1298647..1298961) Dichelobacter nodosus VCS1703A 5122241 YP_001210141.1 CDS rplN NC_009446.1 1298976 1299344 R identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 complement(1298976..1299344) Dichelobacter nodosus VCS1703A 5123049 YP_001210142.1 CDS rpsQ NC_009446.1 1299357 1299620 R identified by match to protein family HMM PF00366; 30S ribosomal protein S17 complement(1299357..1299620) Dichelobacter nodosus VCS1703A 5122289 YP_001210143.1 CDS rpmC NC_009446.1 1299624 1299818 R identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 complement(1299624..1299818) Dichelobacter nodosus VCS1703A 5123290 YP_001210144.1 CDS rplP NC_009446.1 1299818 1300231 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(1299818..1300231) Dichelobacter nodosus VCS1703A 5122843 YP_001210145.1 CDS rpsC NC_009446.1 1300244 1300963 R identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 complement(1300244..1300963) Dichelobacter nodosus VCS1703A 5122727 YP_001210146.1 CDS rplV NC_009446.1 1300976 1301308 R identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 complement(1300976..1301308) Dichelobacter nodosus VCS1703A 5123464 YP_001210147.1 CDS rpsS NC_009446.1 1301318 1301593 R identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; 30S ribosomal protein S19 complement(1301318..1301593) Dichelobacter nodosus VCS1703A 5122311 YP_001210148.1 CDS rplB NC_009446.1 1301596 1302426 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(1301596..1302426) Dichelobacter nodosus VCS1703A 5122298 YP_001210149.1 CDS rplW NC_009446.1 1302439 1302741 R identified by match to protein family HMM PF00276; 50S ribosomal protein L23 complement(1302439..1302741) Dichelobacter nodosus VCS1703A 5123388 YP_001210150.1 CDS rplD NC_009446.1 1302738 1303346 R identified by match to protein family HMM PF00573; 50S ribosomal protein L4 complement(1302738..1303346) Dichelobacter nodosus VCS1703A 5122398 YP_001210151.1 CDS rplC NC_009446.1 1303356 1303994 R identified by match to protein family HMM PF00297; 50S ribosomal protein L3 complement(1303356..1303994) Dichelobacter nodosus VCS1703A 5122224 YP_001210152.1 CDS rpsJ NC_009446.1 1304084 1304398 R identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049; 30S ribosomal protein S10 complement(1304084..1304398) Dichelobacter nodosus VCS1703A 5122815 YP_001210153.1 CDS tufA NC_009446.1 1304404 1305594 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(1304404..1305594) Dichelobacter nodosus VCS1703A 5122410 YP_001210154.1 CDS fusA NC_009446.1 1305612 1307711 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G complement(1305612..1307711) Dichelobacter nodosus VCS1703A 5122418 YP_001210155.1 CDS rpsG NC_009446.1 1307742 1308212 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(1307742..1308212) Dichelobacter nodosus VCS1703A 5122959 YP_001210156.1 CDS rpsL NC_009446.1 1308230 1308604 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(1308230..1308604) Dichelobacter nodosus VCS1703A 5123001 YP_001210157.1 CDS rpoC NC_009446.1 1308698 1312906 R identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' complement(1308698..1312906) Dichelobacter nodosus VCS1703A 5122340 YP_001210158.1 CDS rpoB NC_009446.1 1312926 1317011 R identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta complement(1312926..1317011) Dichelobacter nodosus VCS1703A 5122639 YP_001210159.1 CDS rplL NC_009446.1 1317177 1317545 R identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 complement(1317177..1317545) Dichelobacter nodosus VCS1703A 5122330 YP_001210160.1 CDS rplJ NC_009446.1 1317594 1318097 R identified by match to protein family HMM PF00466; 50S ribosomal protein L10 complement(1317594..1318097) Dichelobacter nodosus VCS1703A 5122226 YP_001210161.1 CDS rplA NC_009446.1 1318266 1318964 R identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 complement(1318266..1318964) Dichelobacter nodosus VCS1703A 5122643 YP_001210162.1 CDS rplK NC_009446.1 1318969 1319397 R identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 complement(1318969..1319397) Dichelobacter nodosus VCS1703A 5123263 YP_001210163.1 CDS nusG NC_009446.1 1319440 1319976 R identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination-antitermination factor NusG complement(1319440..1319976) Dichelobacter nodosus VCS1703A 5122488 YP_001210164.1 CDS secE NC_009446.1 1319977 1320348 R identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; Preprotein translocase subunit SecE complement(1319977..1320348) Dichelobacter nodosus VCS1703A 5122645 YP_001210165.1 CDS apaH NC_009446.1 1322059 1322868 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(1322059..1322868) Dichelobacter nodosus VCS1703A 5122988 YP_001210166.1 CDS DNO_1295 NC_009446.1 1322898 1323692 D identified by match to protein family HMM PF00248; aldo/keto reductase family protein 1322898..1323692 Dichelobacter nodosus VCS1703A 5123145 YP_001210167.1 CDS kdtA NC_009446.1 1323667 1324923 D identified by match to protein family HMM PF04413; 3-deoxy-D-manno-octulosonic-acid transferase 1323667..1324923 Dichelobacter nodosus VCS1703A 5123045 YP_001210168.1 CDS fld NC_009446.1 1324972 1325511 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01752; flavodoxin complement(1324972..1325511) Dichelobacter nodosus VCS1703A 5122140 YP_001210169.1 CDS folD NC_009446.1 1325545 1326420 R identified by match to protein family HMM PF00763; match to protein family HMM PF02882; methylenetetrahydrofolate dehydrogenase complement(1325545..1326420) Dichelobacter nodosus VCS1703A 5122543 YP_001210170.1 CDS DNO_1299 NC_009446.1 1326469 1326882 R identified by match to protein family HMM PF01230; histidine triad domain-containing protein complement(1326469..1326882) Dichelobacter nodosus VCS1703A 5123341 YP_001210171.1 CDS DNO_1300 NC_009446.1 1326938 1327243 R hypothetical protein complement(1326938..1327243) Dichelobacter nodosus VCS1703A 5122604 YP_001210172.1 CDS DNO_1301 NC_009446.1 1327462 1327791 R identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; glutaredoxin-like protein complement(1327462..1327791) Dichelobacter nodosus VCS1703A 5122671 YP_001210173.1 CDS DNO_1302 NC_009446.1 1327812 1329248 R identified by match to protein family HMM PF04575; lipoprotein complement(1327812..1329248) Dichelobacter nodosus VCS1703A 5122567 YP_001210174.1 CDS mutS NC_009446.1 1329353 1331938 R identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070; DNA mismatch repair protein MutS complement(1329353..1331938) Dichelobacter nodosus VCS1703A 5123365 YP_001210175.1 CDS DNO_1304 NC_009446.1 1332047 1332331 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence protein ComEA-related protein complement(1332047..1332331) Dichelobacter nodosus VCS1703A 5122694 YP_001210176.1 CDS comL NC_009446.1 1337830 1338666 R competence protein ComL complement(1337830..1338666) Dichelobacter nodosus VCS1703A 5123091 YP_001210177.1 CDS rluD NC_009446.1 1338713 1339681 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase, RluD 1338713..1339681 Dichelobacter nodosus VCS1703A 5123033 YP_001210178.1 CDS suC NC_009446.1 1339831 1340991 D identified by match to protein family HMM PF00549; match to protein family HMM PF08442; match to protein family HMM TIGR01016; succinyl-CoA synthetase, beta subunit 1339831..1340991 Dichelobacter nodosus VCS1703A 5123014 YP_001210179.1 CDS sucD NC_009446.1 1341001 1341873 D identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthetase, alpha subunit 1341001..1341873 Dichelobacter nodosus VCS1703A 5122174 YP_001210180.1 CDS DNO_1314 NC_009446.1 1342014 1343549 D identified by match to protein family HMM PF07690; permease 1342014..1343549 Dichelobacter nodosus VCS1703A 5122679 YP_001210181.1 CDS DNO_1315 NC_009446.1 1343550 1344560 R hypothetical protein complement(1343550..1344560) Dichelobacter nodosus VCS1703A 5123193 YP_001210182.1 CDS rlmL NC_009446.1 1344612 1346801 R catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase complement(1344612..1346801) Dichelobacter nodosus VCS1703A 5122570 YP_001210183.1 CDS dsbC NC_009446.1 1346829 1347515 R thiol:disulfide interchange protein DsbC complement(1346829..1347515) Dichelobacter nodosus VCS1703A 5122527 YP_001210184.1 CDS DNO_1318 NC_009446.1 1347633 1348106 R identified by match to protein family HMM PF00210; Dps family protein complement(1347633..1348106) Dichelobacter nodosus VCS1703A 5122624 YP_001210185.1 CDS DNO_1319 NC_009446.1 1348187 1349074 R identified by match to protein family HMM PF00498; hypothetical protein complement(1348187..1349074) Dichelobacter nodosus VCS1703A 5123122 YP_001210186.1 CDS DNO_1320 NC_009446.1 1349062 1350333 R identified by match to protein family HMM PF00089; trypsin-like serine and cysteine protease family protein complement(1349062..1350333) Dichelobacter nodosus VCS1703A 5122711 YP_001210187.1 CDS tyrS NC_009446.1 1350330 1351532 R identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase complement(1350330..1351532) Dichelobacter nodosus VCS1703A 5122975 YP_001210188.1 CDS DNO_1322 NC_009446.1 1351854 1352918 D identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein 1351854..1352918 Dichelobacter nodosus VCS1703A 5122183 YP_001210189.1 CDS anmK NC_009446.1 1352919 1354001 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1352919..1354001 Dichelobacter nodosus VCS1703A 5123005 YP_001210190.1 CDS DNO_1324 NC_009446.1 1354024 1354392 D identified by match to protein family HMM PF02537; camphor resistance (CrcB) family protein 1354024..1354392 Dichelobacter nodosus VCS1703A 5123047 YP_001210191.1 CDS ychF NC_009446.1 1354457 1355548 D identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein 1354457..1355548 Dichelobacter nodosus VCS1703A 5122772 YP_001210192.1 CDS efp NC_009446.1 1355571 1356140 D identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P 1355571..1356140 Dichelobacter nodosus VCS1703A 5123413 YP_001210193.1 CDS DNO_1327 NC_009446.1 1356161 1356754 D lipoprotein 1356161..1356754 Dichelobacter nodosus VCS1703A 5122832 YP_001210194.1 CDS DNO_1328 NC_009446.1 1356913 1357230 D hypothetical protein 1356913..1357230 Dichelobacter nodosus VCS1703A 5122487 YP_001210195.1 CDS DNO_1329 NC_009446.1 1357317 1357841 D lipoprotein 1357317..1357841 Dichelobacter nodosus VCS1703A 5122779 YP_001210196.1 CDS DNO_1330 NC_009446.1 1357909 1358511 D identified by match to protein family HMM PF01694; GlpG-like proten 1357909..1358511 Dichelobacter nodosus VCS1703A 5123407 YP_001210197.1 CDS DNO_1331 NC_009446.1 1358566 1358922 R identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein complement(1358566..1358922) Dichelobacter nodosus VCS1703A 5122131 YP_001210198.1 CDS hemE NC_009446.1 1358935 1359972 R identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464; uroporphyrinogen decarboxylase complement(1358935..1359972) Dichelobacter nodosus VCS1703A 5122243 YP_001210199.1 CDS pflA NC_009446.1 1360155 1360904 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase activating enzyme complement(1360155..1360904) Dichelobacter nodosus VCS1703A 5122806 YP_001210200.1 CDS pflB NC_009446.1 1360990 1363287 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; pyruvate-formate lyase complement(1360990..1363287) Dichelobacter nodosus VCS1703A 5123152 YP_001210201.1 CDS argF-2 NC_009446.1 1363787 1364794 D identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658; ornithine carbamoyltransferase 1363787..1364794 Dichelobacter nodosus VCS1703A 5122728 YP_001210202.1 CDS DNO_1336 NC_009446.1 1364795 1365949 D identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM TIGR00275; hypothetical protein 1364795..1365949 Dichelobacter nodosus VCS1703A 5122956 YP_001210203.1 CDS DNO_1337 NC_009446.1 1365983 1366891 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; HAD-superfamily hydrolase 1365983..1366891 Dichelobacter nodosus VCS1703A 5123306 YP_001210204.1 CDS ptrB NC_009446.1 1366930 1369083 D identified by match to protein family HMM PF00326; match to protein family HMM PF02897; prolyl oligopeptidase 1366930..1369083 Dichelobacter nodosus VCS1703A 5123269 YP_001210205.1 CDS groEL NC_009446.1 1369141 1370784 R identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroEL complement(1369141..1370784) Dichelobacter nodosus VCS1703A 5122903 YP_001210206.1 CDS groES NC_009446.1 1370809 1371096 R identified by match to protein family HMM PF00166; co-chaperonin GroES complement(1370809..1371096) Dichelobacter nodosus VCS1703A 5122233 YP_001210207.1 CDS DNO_1341 NC_009446.1 1371401 1372546 R identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase complement(1371401..1372546) Dichelobacter nodosus VCS1703A 5122654 YP_001210208.1 CDS DNO_1342 NC_009446.1 1372591 1373007 D identified by match to protein family HMM PF01797; IS200 family transposase 1372591..1373007 Dichelobacter nodosus VCS1703A 5122467 YP_001210209.1 CDS DNO_1343 NC_009446.1 1373146 1373895 R extracellular solute-binding protein complement(1373146..1373895) Dichelobacter nodosus VCS1703A 5123084 YP_001210210.1 CDS DNO_1344 NC_009446.1 1374220 1374864 D identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 1374220..1374864 Dichelobacter nodosus VCS1703A 5122911 YP_001210211.1 CDS DNO_1345 NC_009446.1 1374870 1375607 D extracellular solute-binding family protein 1374870..1375607 Dichelobacter nodosus VCS1703A 5123418 YP_001210212.1 CDS hslV NC_009446.1 1375756 1376298 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1375756..1376298 Dichelobacter nodosus VCS1703A 5122307 YP_001210213.1 CDS hslU NC_009446.1 1376300 1377655 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1376300..1377655 Dichelobacter nodosus VCS1703A 5123230 YP_001210214.1 CDS DNO_1348 NC_009446.1 1377828 1378439 D identified by match to protein family HMM PF00081; match to protein family HMM PF02777; manganese superoxide dismutase 1377828..1378439 Dichelobacter nodosus VCS1703A 5122928 YP_001210215.1 CDS sdaC NC_009446.1 1379097 1380332 D identified by match to protein family HMM PF01490; serine transporter SdaC 1379097..1380332 Dichelobacter nodosus VCS1703A 5122765 YP_001210216.1 CDS pepT-2 NC_009446.1 1380624 1381865 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1380624..1381865 Dichelobacter nodosus VCS1703A 5122318 YP_001210217.1 CDS dcpA NC_009446.1 1381989 1384148 D identified by match to protein family HMM PF01432; peptidyl-dipeptidase I 1381989..1384148 Dichelobacter nodosus VCS1703A 5122777 YP_001210218.1 CDS dcpB NC_009446.1 1384251 1386323 D identified by match to protein family HMM PF01432; peptidyl-dipeptidase II 1384251..1386323 Dichelobacter nodosus VCS1703A 5122331 YP_001210219.1 CDS dcuC NC_009446.1 1386469 1387866 D responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1386469..1387866 Dichelobacter nodosus VCS1703A 5122526 YP_001210220.1 CDS dcuC NC_009446.1 1387885 1389291 D responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1387885..1389291 Dichelobacter nodosus VCS1703A 5122830 DNO_0008 tRNA DNO_0008 NC_009446.1 9418 9494 R tRNA-Pro complement(9418..9494) Dichelobacter nodosus VCS1703A 5122332 DNO_0016 tRNA DNO_0016 NC_009446.1 18822 18898 R tRNA-Arg complement(18822..18898) Dichelobacter nodosus VCS1703A 5123425 DNO_0032 tRNA DNO_0032 NC_009446.1 38279 38355 R tRNA-Met complement(38279..38355) Dichelobacter nodosus VCS1703A 5122492 DNO_0054 tRNA DNO_0054 NC_009446.1 59791 59867 D tRNA-Pro 59791..59867 Dichelobacter nodosus VCS1703A 5122390 DNO_0055 tRNA DNO_0055 NC_009446.1 59891 59967 D tRNA-Arg 59891..59967 Dichelobacter nodosus VCS1703A 5123070 DNO_0056 tRNA DNO_0056 NC_009446.1 59993 60069 D tRNA-His 59993..60069 Dichelobacter nodosus VCS1703A 5123057 DNO_0058 tRNA DNO_0058 NC_009446.1 60492 60578 R tRNA-Leu complement(60492..60578) Dichelobacter nodosus VCS1703A 5122699 DNO_0059 tRNA DNO_0059 NC_009446.1 60862 60937 D tRNA-Phe 60862..60937 Dichelobacter nodosus VCS1703A 5122824 DNO_0066 tRNA DNO_0066 NC_009446.1 64967 65041 R tRNA-Gln complement(64967..65041) Dichelobacter nodosus VCS1703A 5122367 DNO_0165 tRNA DNO_0165 NC_009446.1 173433 173509 D tRNA-Met 173433..173509 Dichelobacter nodosus VCS1703A 5122435 DNO_0231 tRNA DNO_0231 NC_009446.1 251602 251686 R tRNA-Leu complement(251602..251686) Dichelobacter nodosus VCS1703A 5122771 DNO_0233 tRNA DNO_0233 NC_009446.1 251974 252050 R tRNA-Val complement(251974..252050) Dichelobacter nodosus VCS1703A 5123363 DNO_0283 tRNA DNO_0283 NC_009446.1 301398 301490 R tRNA-Ser complement(301398..301490) Dichelobacter nodosus VCS1703A 5122663 DNO_0409 tRNA DNO_0409 NC_009446.1 452642 452717 D tRNA-Val 452642..452717 Dichelobacter nodosus VCS1703A 5123063 DNO_0410 tRNA DNO_0410 NC_009446.1 452722 452798 D tRNA-Asp 452722..452798 Dichelobacter nodosus VCS1703A 5122949 DNO_0411 tRNA DNO_0411 NC_009446.1 452851 452927 D tRNA-Asp 452851..452927 Dichelobacter nodosus VCS1703A 5123125 DNO_0463 tRNA DNO_0463 NC_009446.1 502770 502859 R tRNA-Ser complement(502770..502859) Dichelobacter nodosus VCS1703A 5122855 DNO_0613 tRNA DNO_0613 NC_009446.1 657102 657178 R tRNA-Met complement(657102..657178) Dichelobacter nodosus VCS1703A 5122578 DNO_0731 tRNA DNO_0731 NC_009446.1 784217 784292 R tRNA-Glu complement(784217..784292) Dichelobacter nodosus VCS1703A 5122151 DNO_0732 tRNA DNO_0732 NC_009446.1 784324 784399 R tRNA-Glu complement(784324..784399) Dichelobacter nodosus VCS1703A 5122327 DNO_0733 tRNA DNO_0733 NC_009446.1 784416 784491 R tRNA-Ala complement(784416..784491) Dichelobacter nodosus VCS1703A 5123154 DNO_0793 tRNA DNO_0793 NC_009446.1 836029 836101 R tRNA-Arg complement(836029..836101) Dichelobacter nodosus VCS1703A 5122867 DNO_0812 tRNA DNO_0812 NC_009446.1 855026 855111 R tRNA-Leu complement(855026..855111) Dichelobacter nodosus VCS1703A 5122994 DNO_0845 tRNA DNO_0845 NC_009446.1 886311 886385 D tRNA-Lys 886311..886385 Dichelobacter nodosus VCS1703A 5122682 DNO_0846 tRNA DNO_0846 NC_009446.1 886435 886509 D tRNA-Lys 886435..886509 Dichelobacter nodosus VCS1703A 5122995 DNO_0885 tRNA DNO_0885 NC_009446.1 927393 927468 R tRNA-Ala complement(927393..927468) Dichelobacter nodosus VCS1703A 5122981 DNO_0886 tRNA DNO_0886 NC_009446.1 927486 927562 R tRNA-Ile complement(927486..927562) Dichelobacter nodosus VCS1703A 5122851 DNO_0943 tRNA DNO_0943 NC_009446.1 986200 986276 D tRNA-Pro 986200..986276 Dichelobacter nodosus VCS1703A 5123038 DNO_0946 tRNA DNO_0946 NC_009446.1 988296 988371 R tRNA-Asn complement(988296..988371) Dichelobacter nodosus VCS1703A 5123117 DNO_0947 tRNA DNO_0947 NC_009446.1 988410 988485 R tRNA-Asn complement(988410..988485) Dichelobacter nodosus VCS1703A 5122937 DNO_1046 tRNA DNO_1046 NC_009446.1 1082481 1082571 R tRNA-Ser complement(1082481..1082571) Dichelobacter nodosus VCS1703A 5122464 DNO_1087 tRNA DNO_1087 NC_009446.1 1127819 1127895 R tRNA-Arg complement(1127819..1127895) Dichelobacter nodosus VCS1703A 5123028 DNO_1089 tRNA DNO_1089 NC_009446.1 1128960 1129035 D tRNA-Thr 1128960..1129035 Dichelobacter nodosus VCS1703A 5122353 DNO_1090 tRNA DNO_1090 NC_009446.1 1129044 1129129 D tRNA-Leu 1129044..1129129 Dichelobacter nodosus VCS1703A 5122477 DNO_1193 tRNA DNO_1193 NC_009446.1 1242886 1242972 R tRNA-Leu complement(1242886..1242972) Dichelobacter nodosus VCS1703A 5123390 DNO_1220 tRNA DNO_1220 NC_009446.1 1264651 1264724 R tRNA-Cys complement(1264651..1264724) Dichelobacter nodosus VCS1703A 5122856 DNO_1221 tRNA DNO_1221 NC_009446.1 1264767 1264841 R tRNA-Gly complement(1264767..1264841) Dichelobacter nodosus VCS1703A 5122416 DNO_1233 tRNA DNO_1233 NC_009446.1 1275820 1275895 R tRNA-Ala complement(1275820..1275895) Dichelobacter nodosus VCS1703A 5123113 DNO_1234 tRNA DNO_1234 NC_009446.1 1275913 1275989 R tRNA-Ile complement(1275913..1275989) Dichelobacter nodosus VCS1703A 5122303 DNO_1289 tRNA DNO_1289 NC_009446.1 1320369 1320444 R tRNA-Trp complement(1320369..1320444) Dichelobacter nodosus VCS1703A 5122579 DNO_1291 tRNA DNO_1291 NC_009446.1 1321748 1321823 R tRNA-Thr complement(1321748..1321823) Dichelobacter nodosus VCS1703A 5123470 DNO_1292 tRNA DNO_1292 NC_009446.1 1321841 1321914 R tRNA-Gly complement(1321841..1321914) Dichelobacter nodosus VCS1703A 5122284 DNO_1293 tRNA DNO_1293 NC_009446.1 1321918 1322002 R tRNA-Tyr complement(1321918..1322002) Dichelobacter nodosus VCS1703A 5122125 DNO_1307 tRNA DNO_1307 NC_009446.1 1335790 1335865 R tRNA-Ala complement(1335790..1335865) Dichelobacter nodosus VCS1703A 5122900 DNO_1308 tRNA DNO_1308 NC_009446.1 1335883 1335959 R tRNA-Ile complement(1335883..1335959) Dichelobacter nodosus VCS1703A 5122972 DNO_0883 rRNA rrfA NC_009446.1 924031 924150 R 5S ribosomal RNA complement(924031..924150) Dichelobacter nodosus VCS1703A 5123144 DNO_0884 rRNA rrlA NC_009446.1 924218 927073 R 23S ribosomal RNA complement(924218..927073) Dichelobacter nodosus VCS1703A 5123146 DNO_0887 rRNA rrsA NC_009446.1 927599 929146 R 16S ribosomal RNA complement(927599..929146) Dichelobacter nodosus VCS1703A 5122190 DNO_1231 rRNA rrfB NC_009446.1 1272458 1272577 R 5S ribosomal RNA complement(1272458..1272577) Dichelobacter nodosus VCS1703A 5122429 DNO_1232 rRNA rrlB NC_009446.1 1272645 1275500 R 23S ribosomal RNA complement(1272645..1275500) Dichelobacter nodosus VCS1703A 5123073 DNO_1235 rRNA rrsB NC_009446.1 1276026 1277573 R 16S ribosomal RNA complement(1276026..1277573) Dichelobacter nodosus VCS1703A 5123200 DNO_1305 rRNA rrfC NC_009446.1 1332428 1332547 R 5S ribosomal RNA complement(1332428..1332547) Dichelobacter nodosus VCS1703A 5123120 DNO_1306 rRNA rrlC NC_009446.1 1332615 1335470 R 23S ribosomal RNA complement(1332615..1335470) Dichelobacter nodosus VCS1703A 5122847 DNO_1309 rRNA rrsC NC_009446.1 1335996 1337543 R 16S ribosomal RNA complement(1335996..1337543) Dichelobacter nodosus VCS1703A 5122947