-- dump date   	20140619_064200
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_002478600.1	PFAM: Peptidase M23; KEGG: dvl:Dvul_0008 peptidase M23B
YP_002478601.1	PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; KEGG: dvu:DVU0001 chromosomal replication initiator protein DnaA
YP_002478602.1	KEGG: dvu:DVU0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain
YP_002478603.1	KEGG: dvl:Dvul_0005 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_002478604.1	KEGG: dvl:Dvul_0004 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_002478605.1	KEGG: dvl:Dvul_0003 putative lipoprotein
YP_002478606.1	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: dvl:Dvul_2807 amidophosphoribosyltransferase
YP_002478607.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_002478608.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_002478609.1	KEGG: dvl:Dvul_0029 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_002478610.1	KEGG: dvu:DVU3365 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein
YP_002478611.1	PFAM: protein of unknown function DUF116; KEGG: dvl:Dvul_0031 hypothetical protein
YP_002478612.1	PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: lip:LI0876 tRNA and rRNA cytosine-C5-methylases
YP_002478613.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: dvu:DVU3360 ParB family protein
YP_002478614.1	KEGG: dvl:Dvul_0036 hypothetical protein
YP_002478615.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_0037 cobyrinic acid a,c-diamide synthase
YP_002478616.1	PFAM: response regulator receiver; KEGG: dvl:Dvul_0150 response regulator receiver protein
YP_002478617.1	PFAM: DSBA oxidoreductase; KEGG: dvl:Dvul_2927 DsbA oxidoreductase
YP_002478618.1	KEGG: dvl:Dvul_0201 hypothetical protein
YP_002478619.1	PFAM: NLP/P60 protein; KEGG: dvu:DVU3188 NLP/P60 family protein
YP_002478620.1	PFAM: UvrD/REP helicase; KEGG: dvl:Dvul_2483 UvrD/REP helicase
YP_002478621.1	KEGG: dvu:DVU0452 hypothetical protein
YP_002478622.1	PFAM: peptidase U32; KEGG: dvl:Dvul_0074 peptidase U32
YP_002478623.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_0038 NAD-dependent epimerase/dehydratase
YP_002478624.1	KEGG: dvl:Dvul_1966 hypothetical protein
YP_002478625.1	PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: dvl:Dvul_0292 precorrin-8X methylmutase CbiC/CobH
YP_002478626.1	PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dvl:Dvul_0293 cobyrinic acid a,c-diamide synthase
YP_002478627.1	KEGG: dvl:Dvul_0294 hypothetical protein
YP_002478628.1	PFAM: aminodeoxychorismate lyase; KEGG: dvl:Dvul_0308 aminodeoxychorismate lyase
YP_002478629.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: dvl:Dvul_0307 Holliday junction resolvase YqgF
YP_002478630.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002478631.1	PFAM: peptidase M50; KEGG: lip:LI0021 Zn-dependent proteases
YP_002478632.1	KEGG: dvu:DVU0136 hypothetical protein
YP_002478633.1	TIGRFAM: C_GCAxxG_C_C family protein; KEGG: mla:Mlab_0460 hypothetical protein
YP_002478634.1	PFAM: nucleoside recognition domain protein; KEGG: dvl:Dvul_2272 hypothetical protein
YP_002478635.1	PFAM: ribonuclease H; KEGG: dvl:Dvul_2274 ribonuclease H
YP_002478636.1	PFAM: chemotaxis sensory transducer; KEGG: dvu:DVU1975 methyl-accepting chemotaxis protein
YP_002478637.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_002478638.1	PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dvl:Dvul_2348 methyltransferase type 11
YP_002478639.1	PFAM: protein of unknown function DUF721; KEGG: dvl:Dvul_2350 hypothetical protein
YP_002478640.1	KEGG: dvl:Dvul_2048 hypothetical protein
YP_002478641.1	KEGG: dvl:Dvul_2321 hypothetical protein
YP_002478642.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: dvl:Dvul_0306 FAD linked oxidase domain-containing protein
YP_002478643.1	KEGG: lip:LI0261 glutamate decarboxylase isozyme; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase
YP_002478644.1	PFAM: amino acid permease-associated region; KEGG: lip:LI0262 amino acid transporters
YP_002478645.1	PFAM: amino acid permease-associated region; KEGG: sfv:SFV_2499 putative amino acid antiporter
YP_002478646.1	catalyzes the formation of glutamate from glutamine
YP_002478647.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sen:SACE_4268 AraC family transcription regulator
YP_002478648.1	PFAM: ThiJ/PfpI domain protein; KEGG: plu:plu3545 hypothetical protein
YP_002478649.1	PFAM: band 7 protein; KEGG: cts:Ctha_1815 band 7 protein
YP_002478650.1	PFAM: protein of unknown function DUF107; KEGG: dps:DP1870 hypothetical protein
YP_002478651.1	KEGG: dvl:Dvul_2440 hypothetical protein
YP_002478652.1	KEGG: dvl:Dvul_2438 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_002478653.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_002478654.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: dvl:Dvul_2436 tRNA pseudouridine synthase B
YP_002478655.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: lip:LI0536 exopolyphosphatase-like protein
YP_002478656.1	PFAM: protein of unknown function DUF503; KEGG: dvl:Dvul_2434 hypothetical protein
YP_002478657.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_002478658.1	PFAM: protein of unknown function DUF448; KEGG: dvu:DVU0509 hypothetical protein
YP_002478659.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_002478660.1	PFAM: protein of unknown function DUF150; KEGG: dvl:Dvul_2430 hypothetical protein
YP_002478661.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; KEGG: dvl:Dvul_1295 methyl-accepting chemotaxis sensory transducer
YP_002478662.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: NUDIX hydrolase; helix-hairpin-helix motif; HhH-GPD family protein; KEGG: dvl:Dvul_2698 A/G-specific adenine glycosylase
YP_002478663.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: dvl:Dvul_2696 peptidylprolyl isomerase
YP_002478665.1	PFAM: YceI family protein; KEGG: ote:Oter_2283 YceI family protein
YP_002478666.1	PFAM: class II aldolase/adducin family protein; KEGG: dvl:Dvul_2810 class II aldolase/adducin family protein
YP_002478667.1	PFAM: glycosyl transferase family 2; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein
YP_002478668.1	KEGG: dvu:DVU0157 thiamin-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein
YP_002478669.1	PFAM: UvrD/REP helicase; KEGG: dvl:Dvul_2812 UvrD/REP helicase
YP_002478670.1	KEGG: dvu:DVU3281 hypothetical protein
YP_002478671.1	PFAM: putative rRNA methylase; KEGG: gme:Gmet_2819 putative rRNA methylase
YP_002478672.1	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: dvu:DVU0421 agmatinase, putative
YP_002478673.1	KEGG: efa:EF1860 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_002478674.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bth:BT_1219 hypothetical protein
YP_002478675.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: dvu:DVU0256 DEAD-box ATP dependent DNA helicase
YP_002478676.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_2637 hexapaptide repeat-containing transferase
YP_002478677.1	PFAM: NADPH-dependent FMN reductase; KEGG: dar:Daro_2797 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase
YP_002478678.1	KEGG: sth:STH3036 hypothetical protein
YP_002478679.1	PFAM: cytochrome c552; KEGG: dvl:Dvul_2333 nitrite reductase (cytochrome; ammonia-forming)
YP_002478680.1	KEGG: dvl:Dvul_2334 NapC/NirT cytochrome c family protein
YP_002478681.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dvl:Dvul_2335 multi-sensor hybrid histidine kinase
YP_002478682.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_2336 two component, sigma54 specific, Fis family transcriptional regulator
YP_002478683.1	KEGG: dvl:Dvul_2341 hypothetical protein
YP_002478684.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: dvu:DVU0344 methyl-accepting chemotaxis protein
YP_002478685.1	PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_2207 histone family protein DNA-binding protein
YP_002478686.1	KEGG: dvl:Dvul_2202 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_002478687.1	PFAM: protein of unknown function DUF81; KEGG: dvu:DVU0770 hypothetical protein
YP_002478688.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_002478689.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_002478690.1	KEGG: dvl:Dvul_0429 hypothetical protein
YP_002478691.1	KEGG: dvl:Dvul_0428 hypothetical protein
YP_002478692.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dvl:Dvul_0427 FmdB family regulatory protein
YP_002478693.1	TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: dvl:Dvul_0426 adenylosuccinate lyase
YP_002478694.1	KEGG: dvl:Dvul_0425 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_002478695.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: dvl:Dvul_0424 ErfK/YbiS/YcfS/YnhG family protein
YP_002478696.1	KEGG: dvl:Dvul_0423 hypothetical protein
YP_002478697.1	PFAM: aconitate hydratase domain protein; KEGG: dsy:DSY4204 hypothetical protein
YP_002478698.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bcz:BCZK2117 homoserine/threonine efflux protein
YP_002478699.1	PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: dvl:Dvul_2464 isocitrate/isopropylmalate dehydrogenase
YP_002478700.1	PFAM: pyruvate carboxyltransferase; KEGG: dvl:Dvul_2536 pyruvate carboxyltransferase
YP_002478701.1	PFAM: ribonuclease II; KEGG: dvl:Dvul_0179 ribonuclease II
YP_002478702.1	PFAM: protein of unknown function DUF205; KEGG: dvl:Dvul_0178 hypothetical protein
YP_002478703.1	KEGG: dvl:Dvul_0177 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_002478704.1	PFAM: transcription activator effector binding; KEGG: aoe:Clos_2726 transcription activator effector binding
YP_002478705.1	KEGG: dvl:Dvul_2655 sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_002478706.1	PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_2654 glycosyl transferase, group 1
YP_002478707.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: dvl:Dvul_2662 NAD-dependent epimerase/dehydratase
YP_002478708.1	KEGG: similar to CREB-regulated transcription coactivator   1 (Transducer of regulated cAMP response element-binding   protein 1) (Transducer of CREB protein 1)   (Mucoepidermoid carcinoma translocated protein 1)
YP_002478710.1	PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: chy:CHY_2391 glycine reductase proprotein GrdE
YP_002478711.1	KEGG: aoe:Clos_0958 selenoprotein B; Contains selenocysteine; TIGRFAM: glycine reductase, selenoprotein B; selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Selenoprotein B glycine/betaine/sarcosine/D-proline reductase
YP_002478712.1	KEGG: pth:PTH_1417 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase
YP_002478713.1	KEGG: chy:CHY_2394 glycine reductase complex, protein C
YP_002478714.1	PFAM: fatty acid synthesis plsX protein; KEGG: cpo:COPRO5265_0228 fatty acid/phospholipid synthesis protein PlsX
YP_002478715.1	PFAM: Thioredoxin domain; KEGG: sth:STH2871 thioredoxin
YP_002478716.1	GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin
YP_002478717.1	PFAM: chemotaxis sensory transducer; KEGG: dvl:Dvul_0942 methyl-accepting chemotaxis sensory transducer
YP_002478718.1	KEGG: csa:Csal_0252 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002478720.1	KEGG: afu:AF0288 adenylylsulfate kinase
YP_002478721.1	PFAM: polysaccharide deacetylase; KEGG: dvl:Dvul_2705 polysaccharide deacetylase
YP_002478722.1	TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dvu:DVU0419 carboxynorspermidine decarboxylase
YP_002478723.1	PFAM: Saccharopine dehydrogenase; KEGG: dvl:Dvul_2516 saccharopine dehydrogenase
YP_002478724.1	PFAM: histone deacetylase superfamily; KEGG: dvl:Dvul_1093 histone deacetylase superfamily protein
YP_002478726.1	PFAM: thymidylate kinase; KEGG: dvu:DVU2140 thymidylate kinase
YP_002478727.1	KEGG: dvl:Dvul_1091 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002478728.1	KEGG: dvl:Dvul_1090 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE
YP_002478729.1	KEGG: dvl:Dvul_1089 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II
YP_002478730.1	KEGG: dvl:Dvul_1088 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_002478731.1	PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: lip:LI0081 nucleoside-diphosphate sugar epimerase
YP_002478732.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvu:DVU1975 methyl-accepting chemotaxis protein
YP_002478733.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: lip:LI0792 ferredoxin oxidoreductases, gamma subunit
YP_002478734.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: lip:LI0791 ferredoxin oxidoreductases, beta subunit
YP_002478735.1	catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA
YP_002478736.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0044 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002478737.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_002478738.1	KEGG: dvl:Dvul_0042 putative lipoprotein
YP_002478739.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: dvl:Dvul_0041 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
YP_002478740.1	KEGG: dvl:Dvul_0040 hypothetical protein
YP_002478741.1	KEGG: bth:BT_2176 hypothetical protein
YP_002478742.1	PFAM: protein of unknown function DUF340 membrane; KEGG: bvu:BVU_1366 hypothetical protein
YP_002478743.1	KEGG: dvl:Dvul_2682 hypothetical protein
YP_002478744.1	KEGG: gsu:GSU1966 hypothetical protein
YP_002478745.1	PFAM: response regulator receiver; CheW domain protein; KEGG: lip:LI1117 chemotaxis signal transduction protein
YP_002478747.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dvl:Dvul_2297 cysteine synthases
YP_002478748.1	KEGG: ppd:Ppro_0148 hypothetical protein
YP_002478749.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dps:DP0303 dihydrolipoamide dehydrogenase, E3 component
YP_002478750.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: nph:NP4772A glycin cleavage system H protein
YP_002478751.1	PFAM: OsmC family protein; KEGG: drm:Dred_2833 OsmC family protein
YP_002478752.1	PFAM: Na+/solute symporter; KEGG: drm:Dred_2834 Na+/solute symporter
YP_002478753.1	PFAM: CBS domain containing protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: drm:Dred_2835 putative PAS/PAC sensor protein
YP_002478754.1	KEGG: dvl:Dvul_2386 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_002478756.1	PFAM: GAF domain protein; KEGG: dvl:Dvul_2385 putative GAF sensor protein
YP_002478757.1	PFAM: protein of unknown function DUF583; KEGG: dvl:Dvul_2189 hypothetical protein
YP_002478758.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: dvl:Dvul_2188 rod shape-determining protein RodA
YP_002478759.1	KEGG: dvu:DVU0786 penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_002478760.1	KEGG: dvl:Dvul_2186 hypothetical protein
YP_002478761.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_002478762.1	functions in MreBCD complex in some organisms
YP_002478763.1	KEGG: dvl:Dvul_2183 putative radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002478764.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: dvl:Dvul_0339 methyl-accepting chemotaxis sensory transducer
YP_002478765.1	PFAM: integrase family protein; TOBE domain protein; KEGG: dvl:Dvul_2790 TOBE domain-containing protein
YP_002478766.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dvu:DVU0177 molybdenum ABC transporter, periplasmic molybdenum-binding protein
YP_002478767.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2788 molybdate ABC transporter, inner membrane subunit
YP_002478768.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2789 ABC transporter related
YP_002478769.1	KEGG: mta:Moth_2167 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_002478770.1	PFAM: amino acid permease-associated region; KEGG: btl:BALH_0632 amino acid permease, proline-specific permease
YP_002478771.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pgn:PGN_1120 putative NADPH-NAD transhydrogenase
YP_002478772.1	KEGG: pgn:PGN_1121 probable NADPH-NAD transhydrogenase alpha subunit
YP_002478773.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pgn:PGN_1122 NADPH-NAD transhydrogenase beta subunit
YP_002478774.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein
YP_002478775.1	KEGG: bbt:BBta_5626 hydrolase domain-containing protein
YP_002478776.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: gvi:gll0947 alginate O-acetylation protein
YP_002478777.1	PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_2538 histone family protein DNA-binding protein
YP_002478778.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: lip:LI0429 coproporphyrinogen III oxidase-like protein
YP_002478779.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_2346 methyl-accepting chemotaxis sensory transducer
YP_002478781.1	KEGG: dvl:Dvul_0015 zinc resistance-associated protein
YP_002478782.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0016 signal transduction histidine kinase, nitrogen specific, NtrB
YP_002478783.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_0017 two component, sigma54 specific, Fis family transcriptional regulator
YP_002478784.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_0799 metal dependent phosphohydrolase
YP_002478785.1	PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cpy:Cphy_2835 diguanylate cyclase/phosphodiesterase
YP_002478786.1	TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: predicted protein; K00930 acetylglutamate kinase
YP_002478787.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_1726 multi-sensor hybrid histidine kinase
YP_002478788.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_002478789.1	TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: lip:LI0532 flagellar biosynthesis pathway, component FliR
YP_002478790.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2158 major facilitator superfamily MFS_1
YP_002478791.1	PFAM: response regulator receiver; CheW domain protein; KEGG: dvl:Dvul_1997 putative CheW protein
YP_002478792.1	KEGG: dvl:Dvul_1999 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; Endonuclease III/Nth; SMART: iron-sulfur cluster loop
YP_002478793.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: afw:Anae109_1180 CutA1 divalent ion tolerance protein
YP_002478794.1	PFAM: PfkB domain protein; KEGG: dvl:Dvul_2001 ribokinase-like domain-containing protein
YP_002478795.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_2338 hypothetical protein
YP_002478796.1	PFAM: protein of unknown function DUF606; KEGG: gme:Gmet_2636 hypothetical protein
YP_002478797.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: dvl:Dvul_0019 YbaK/prolyl-tRNA synthetase associated region
YP_002478798.1	PFAM: protein of unknown function DUF134; KEGG: dsy:DSY3441 hypothetical protein
YP_002478799.1	KEGG: dol:Dole_0573 hypothetical protein
YP_002478800.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: trq:TRQ2_1532 cupin 2 domain-containing protein
YP_002478801.1	PFAM: MscS Mechanosensitive ion channel; KEGG: dvu:DVU1544 mechanosensitive ion channel family protein
YP_002478802.1	PFAM: protein of unknown function DUF362; KEGG: dvu:DVU3036 hypothetical protein
YP_002478803.1	KEGG: dvl:Dvul_1139 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_002478804.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcj:BCAL1417 LysR family regulatory protein
YP_002478805.1	PFAM: LrgA family protein; KEGG: dsy:DSY3772 hypothetical protein
YP_002478806.1	PFAM: LrgB family protein; KEGG: gbm:Gbem_2907 LrgB family protein
YP_002478807.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pgn:PGN_1120 putative NADPH-NAD transhydrogenase
YP_002478808.1	KEGG: pgn:PGN_1121 probable NADPH-NAD transhydrogenase alpha subunit
YP_002478809.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pgn:PGN_1122 NADPH-NAD transhydrogenase beta subunit
YP_002478811.1	PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_002478812.1	KEGG: dps:DP0355 transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_002478813.1	catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source
YP_002478814.1	PFAM: amino acid permease-associated region; KEGG: dps:DP0547 amino acid transporter
YP_002478815.1	PFAM: integrase family protein; KEGG: dvl:Dvul_1487 phage integrase family protein
YP_002478818.1	PFAM: BRO domain protein; KEGG: ppw:PputW619_1315 prophage antirepressor
YP_002478819.1	PFAM: protein of unknown function DUF497; KEGG: gur:Gura_0581 hypothetical protein
YP_002478820.1	KEGG: dvl:Dvul_1495 CopG family protein
YP_002478821.1	PFAM: protein of unknown function DUF37; KEGG: ilo:IL2081 alpha-hemolysin family protein
YP_002478822.1	KEGG: ypi:YpsIP31758_1761 hypothetical protein
YP_002478823.1	KEGG: ava:Ava_0171 hypothetical protein
YP_002478824.1	PFAM: Gp37Gp68 family protein; KEGG: rca:Rcas_0327 Gp37Gp68 family protein
YP_002478826.1	KEGG: esa:ESA_00350 hypothetical protein
YP_002478829.1	KEGG: mmw:Mmwyl1_0594 hypothetical protein
YP_002478830.1	PFAM: transcriptional activator Ogr/delta; KEGG: dvl:Dvul_2769 phage transcriptional activator, Ogr/delta
YP_002478831.1	TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: dvl:Dvul_2768 PBSX family phage portal protein
YP_002478832.1	PFAM: protein of unknown function DUF264; putative terminase ATPase subunit; KEGG: dvl:Dvul_1472 hypothetical protein
YP_002478833.1	PFAM: capsid scaffolding; KEGG: dvl:Dvul_1471 phage capsid scaffolding
YP_002478834.1	TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; KEGG: dvl:Dvul_2765 P2 family phage major capsid protein
YP_002478835.1	PFAM: small terminase subunit; KEGG: dvl:Dvul_2764 phage small terminase subunit
YP_002478836.1	PFAM: head completion protein; KEGG: dvl:Dvul_2763 prophage PSPPH06, putative head completion/stabilization protein
YP_002478837.1	KEGG: dvl:Dvul_2762 hypothetical protein
YP_002478838.1	KEGG: dvl:Dvul_2761 phage virion morphogenesis protein
YP_002478839.1	KEGG: dvl:Dvul_2760 hypothetical protein
YP_002478840.1	KEGG: dvl:Dvul_2759 prophage PSPPH06, putative tail tube protein
YP_002478841.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rsh:Rsph17029_1851 peptidase M15A
YP_002478842.1	KEGG: asa:ASA_1577 phage protein
YP_002478844.1	KEGG: asa:ASA_3839 phage protein
YP_002478845.1	KEGG: dvl:Dvul_2753 hypothetical protein
YP_002478846.1	TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; KEGG: dvl:Dvul_1457 TP901 family phage tail tape measure protein
YP_002478847.1	KEGG: dvu:DVU1641 hypothetical protein
YP_002478848.1	KEGG: dvl:Dvul_1453 uncharacterized phage Mu protein GP47-like protein
YP_002478849.1	KEGG: dvl:Dvul_1452 hypothetical protein
YP_002478850.1	KEGG: dvl:Dvul_1451 hypothetical protein
YP_002478851.1	KEGG: dvu:DVU2731 tail fiber assembly protein, putative
YP_002478853.1	KEGG: dvl:Dvul_1449 hypothetical protein
YP_002478854.1	KEGG: dvl:Dvul_2745 nucleoid DNA-binding protein
YP_002478855.1	KEGG: dvl:Dvul_1447 hypothetical protein
YP_002478856.1	PFAM: Gp5 domain protein; KEGG: dvl:Dvul_2743 GP5 domain-containing protein
YP_002478859.1	KEGG: sml:Smlt2077A hypothetical protein
YP_002478860.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002478861.1	KEGG: ecv:APECO1_4218 putative phage integrase
YP_002478862.1	KEGG: xfn:XfasM23_2250 putative plasmid conjugal transfer protein
YP_002478863.1	TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: mca:MCA1618 DNA mismatch endonuclease, vsr
YP_002478864.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ecp:ECP_3766 putative type II 5-cytosoine methyltransferase
YP_002478865.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ecp:ECP_3766 putative type II 5-cytosoine methyltransferase
YP_002478866.1	KEGG: ecp:ECP_3768 hypothetical protein
YP_002478867.1	PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit
YP_002478868.1	PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA
YP_002478869.1	TIGRFAM: outer membrane adhesin like proteiin; KEGG: sdn:Sden_0384 hypothetical protein
YP_002478870.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dth:DICTH_1665 D-3-phosphoglycerate dehydrogenase
YP_002478872.1	KEGG: dvu:DVU0662 serine O-acetyltransferase
YP_002478874.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: dvl:Dvul_1118 xanthine/uracil/vitamin C permease
YP_002478875.1	KEGG: dvl:Dvul_2260 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_002478876.1	KEGG: lip:LI0751 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002478877.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: dvu:DVU2655 D-alanyl-D-alanine carboxypeptidase family protein
YP_002478878.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1305 methyl-accepting chemotaxis sensory transducer
YP_002478879.1	KEGG: lip:LI0207 transcriptional regulators
YP_002478880.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvl:Dvul_2128 radical SAM domain-containing protein
YP_002478881.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_002478882.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvl:Dvul_2126 radical SAM domain-containing protein
YP_002478883.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002478884.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_002478885.1	PFAM: thiamine biosynthesis protein; KEGG: dvu:DVU1091 hypothetical protein
YP_002478886.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: dvl:Dvul_1083 TraR/DksA family transcriptional regulator
YP_002478887.1	PFAM: protein of unknown function DUF814; KEGG: dvu:DVU2149 hypothetical protein
YP_002478888.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN3859 benzoate membrane transport protein, MFS superfamily
YP_002478889.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_002478890.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_002478891.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
YP_002478893.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: lip:LI0843 methyl-accepting chemotaxis protein
YP_002478894.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: lip:LIC103 methyl-accepting chemotaxis protein
YP_002478895.1	KEGG: lpf:plpl0013 hypothetical protein
YP_002478896.1	KEGG: fal:FRAAL6470 hypothetical protein
YP_002478897.1	KEGG: dvu:DVU3389 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein
YP_002478898.1	PFAM: protein of unknown function DUF182; KEGG: pth:PTH_0686 xanthine and CO dehydrogenases maturation factor
YP_002478900.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: lip:LI0993 multidrug efflux membrane permease
YP_002478901.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: dvl:Dvul_2900 hydrophobe/amphiphile efflux-1 (HAE1) family protein
YP_002478902.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: lip:LI0995 outer membrane efflux protein
YP_002478904.1	KEGG: dvl:Dvul_0013 hypothetical protein
YP_002478905.1	PFAM: glycosyl transferase family 9; KEGG: dvl:Dvul_2523 glycosyl transferase family protein
YP_002478906.1	KEGG: dvl:Dvul_2524 hypothetical protein
YP_002478907.1	KEGG: lip:LI1016 hypothetical protein
YP_002478908.1	PFAM: SAICAR synthetase; KEGG: emi:Emin_0220 phosphoribosylaminoimidazolesuccinocarboxamide synthase
YP_002478909.1	KEGG: cmi:CMM_0897 hypothetical protein
YP_002478911.1	PFAM: Chloride channel core; KEGG: cpe:CPE1408 hypothetical protein
YP_002478912.1	KEGG: dvl:Dvul_0136 phenylacetate-coenzyme A ligase, putative
YP_002478913.1	KEGG: glo:Glov_1444 protein of unknown function DUF169
YP_002478914.1	KEGG: dvu:DVU3225 hypothetical protein
YP_002478915.1	KEGG: dvl:Dvul_0162 hypothetical protein
YP_002478916.1	PFAM: flagellar basal body-associated protein FliL; KEGG: dvu:DVU3227 flagellar basal body-associated protein, putative
YP_002478917.1	PFAM: response regulator receiver; KEGG: dvl:Dvul_0160 response regulator receiver protein
YP_002478918.1	KEGG: dvl:Dvul_0159 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2
YP_002478919.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_0158 cobyrinic acid a,c-diamide synthase
YP_002478920.1	PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: dvl:Dvul_0157 flagellar biosynthesis protein FlhF, putative
YP_002478921.1	SMART: helix-turn-helix domain protein
YP_002478922.1	PFAM: helix-turn-helix domain protein; KEGG: hau:Haur_2753 XRE family transcriptional regulator
YP_002478923.1	membrane protein involved in the flagellar export apparatus
YP_002478924.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_002478925.1	PFAM: major facilitator superfamily MFS_1; KEGG: dol:Dole_2623 major facilitator transporter
YP_002478926.1	PFAM: Prephenate dehydrogenase; KEGG: dvl:Dvul_2473 prephenate dehydrogenase
YP_002478927.1	KEGG: dvu:DVU0463 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_002478928.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: dvl:Dvul_2475 chorismate mutase
YP_002478929.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-aribino-heptulonate 7-phosphate
YP_002478930.1	catalyzes the reversible formation of fructose 1,6-bisphosphate from glycerone phosphate and D-glyceraldehyde 3-phosphate
YP_002478931.1	catalyzes the formation of pyruvate from D-cysteine
YP_002478932.1	PFAM: Na+/H+ antiporter NhaC; KEGG: dvl:Dvul_0605 Na+/H+ antiporter NhaC
YP_002478933.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: dps:DP1500 transcription regulator
YP_002478934.1	PFAM: phosphoesterase RecJ domain protein; KEGG: lip:LI0703 exopolyphosphatase-like protein
YP_002478935.1	KEGG: dvl:Dvul_2481 hypothetical protein
YP_002478937.1	PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: dvl:Dvul_2044 peptidase M16C associated domain-containing protein
YP_002478938.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_002478939.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_002478940.1	PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: rru:Rru_A2870 integral membrane protein TerC
YP_002478941.1	PFAM: chemotaxis sensory transducer; KEGG: dvl:Dvul_0942 methyl-accepting chemotaxis sensory transducer
YP_002478942.1	PFAM: Phosphoglycerate mutase; 6-phosphofructo-2-kinase; KEGG: lip:LI0094 fructose-2,6-bisphosphatase
YP_002478943.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: csa:Csal_0199 aspartate racemase
YP_002478944.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_002478948.1	KEGG: dvl:Dvul_2832 hypothetical protein
YP_002478949.1	PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2833 hypothetical protein
YP_002478950.1	PFAM: protein of unknown function UPF0153; KEGG: dvl:Dvul_2824 hypothetical protein
YP_002478952.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_002478953.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_002478954.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dvl:Dvul_0291 DEAD/DEAH box helicase domain-containing protein
YP_002478955.1	KEGG: dvu:DVU3089 hypothetical protein
YP_002478956.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: dvl:Dvul_2486 riboflavin biosynthesis protein RibF
YP_002478957.1	KEGG: dra:DR_0094 hypothetical protein
YP_002478958.1	TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: dvu:DVU2490 histidinol phosphatase, putative
YP_002478959.1	KEGG: sul:SYO3AOP1_0717 conserved hypothetical protein, putative cytochrome
YP_002478960.1	KEGG: glo:Glov_1763 hypothetical protein
YP_002478961.1	PFAM: protein of unknown function DUF165; KEGG: hne:HNE_0462 hypothetical protein
YP_002478962.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_002478963.1	PFAM: alanine racemase domain protein; KEGG: dvl:Dvul_2910 alanine racemase domain-containing protein
YP_002478964.1	PFAM: flagellar basal body-associated protein FliL; KEGG: dvl:Dvul_2914 flagellar basal body-associated protein FliL
YP_002478966.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: lip:LI0641 flagellar motor switch/type III secretory pathway protein
YP_002478967.1	PFAM: flagellar biosynthesis protein FliO; KEGG: dvl:Dvul_2916 flagellar biosynthesis protein, FliO, putative
YP_002478968.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_002478969.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: dvl:Dvul_2918 flagellar biosynthetic protein FliQ
YP_002478970.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: dvl:Dvul_2919 RNA methyltransferase
YP_002478971.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: dvl:Dvul_2920 lytic transglycosylase, catalytic
YP_002478972.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_1132 cobyrinic acid a,c-diamide synthase
YP_002478973.1	KEGG: dvl:Dvul_1133 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane
YP_002478974.1	SMART: regulatory protein Crp; KEGG: chy:CHY_1835 carbon monoxide oxidation system transcription regulator CooA-1
YP_002478975.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dvl:Dvul_1243 hydrogenase assembly chaperone HypC/HupF
YP_002478976.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_002478977.1	KEGG: dvl:Dvul_1239 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II
YP_002478978.1	KEGG: dvu:DVU1929 hypothetical protein
YP_002478979.1	KEGG: dvl:Dvul_1237 TPR repeat-containing protein; TIGRFAM: tol-pal system protein YbgF; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_002478980.1	KEGG: dvu:DVU1458 chemotaxis protein CheZ, putative
YP_002478981.1	PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_1688 nitroreductase
YP_002478982.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0740 flagellar basal body rod protein
YP_002478983.1	makes up the distal portion of the flagellar basal body rod
YP_002478984.1	TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: dvl:Dvul_2427 FlgA family protein
YP_002478985.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_002478986.1	KEGG: bcm:Bcenmc03_5566 integrase catalytic region
YP_002478987.1	KEGG: sus:Acid_6620 glycosyl transferase, group 1
YP_002478988.1	PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_4708 glycosyl transferase group 1
YP_002478989.1	PFAM: glycosyl transferase family 2; KEGG: tel:tll0993 probable glycosly transferase
YP_002478990.1	PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_2592 glycosyltransferase domain protein
YP_002478991.1	PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_3029 glycosyl transferase family protein
YP_002478992.1	PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1682 glycosyl transferase family protein
YP_002478993.1	PFAM: Methyltransferase type 12; KEGG: hypothetical protein
YP_002478994.1	KEGG: rpe:RPE_4247 glycosyl transferase, family 2
YP_002478995.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvl:Dvul_2647 DegT/DnrJ/EryC1/StrS aminotransferase
YP_002478996.1	KEGG: dvl:Dvul_2646 hypothetical protein
YP_002478997.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_2637 hexapaptide repeat-containing transferase
YP_002478998.1	KEGG: mag:amb0137 hypothetical protein
YP_002479000.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpb:Cphamn1_0373 ABC transporter-related protein
YP_002479001.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein; K02377 GDP-L-fucose synthase
YP_002479002.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: dvu:DVU0448 GDP-mannose 4,6-dehydratase
YP_002479003.1	KEGG: syf:Synpcc7942_1608 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_002479004.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gbm:Gbem_1134 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III
YP_002479005.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: eba:ebA3750 putative transcriptional regulator
YP_002479006.1	PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_1047 major facilitator transporter
YP_002479009.1	PFAM: 4-vinyl reductase 4VR; KEGG: mbn:Mboo_0934 4-vinyl reductase, 4VR
YP_002479010.1	PFAM: CI repressor; KEGG: dvl:Dvul_2281 putative phage repressor
YP_002479011.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cdf:CD1476 putative signaling protein
YP_002479012.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: glo:Glov_2679 diguanylate cyclase
YP_002479013.1	KEGG: tex:Teth514_0779 pyridoxal phosphate-dependent acyltransferase, putative; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II
YP_002479014.1	catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A
YP_002479015.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH759 ABC transporter ATP-binding protein
YP_002479016.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH758 ABC transporter permease protein
YP_002479017.1	KEGG: eba:ebA2115 putative periplasmic component of ABC-type transport system
YP_002479018.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_A1457 O-methyltransferase family protein
YP_002479019.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rru:Rru_A1458 TonB-dependent receptor
YP_002479020.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ana:alr2575 transcriptional regulator
YP_002479021.1	PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA
YP_002479022.1	PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit
YP_002479023.1	PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_0455 helix-turn-helix domain protein
YP_002479024.1	PFAM: plasmid recombination protein; SMART: Toprim sub domain protein; KEGG: npu:Npun_R3345 plasmid recombination enzyme
YP_002479025.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pha:PSHAa1599 Soj protein, ATPase involved in chromosome partitioning
YP_002479026.1	KEGG: pha:PSHAa1598 hypothetical protein
YP_002479027.1	KEGG: pha:PSHAa1597 hypothetical protein
YP_002479028.1	KEGG: bvi:Bcep1808_0279 phage integrase family protein
YP_002479029.1	SMART: Tetratricopeptide domain protein; KEGG: dvu:DVU1955 TPR domain-containing protein
YP_002479030.1	KEGG: dvl:Dvul_1214 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_002479031.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_002479032.1	KEGG: dvu:DVU1952 hypothetical protein
YP_002479033.1	TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dvl:Dvul_1217 indolepyruvate ferredoxin oxidoreductase
YP_002479034.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dvl:Dvul_1218 indolepyruvate ferredoxin oxidoreductase
YP_002479035.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_002479036.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvl:Dvul_0462 metal dependent phosphohydrolase
YP_002479037.1	PFAM: Polysulphide reductase NrfD; KEGG: dvl:Dvul_1779 polysulphide reductase, NrfD
YP_002479038.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_1778 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002479039.1	KEGG: dvl:Dvul_1777 cytochrome c family protein
YP_002479040.1	KEGG: dvl:Dvul_1776 reductase, iron-sulfur binding subunit, putative
YP_002479041.1	PFAM: Nitrate reductase gamma subunit; KEGG: dvl:Dvul_1775 nitrate reductase, gamma subunit
YP_002479042.1	KEGG: dvl:Dvul_1774 hypothetical protein
YP_002479043.1	KEGG: dvl:Dvul_1773 hypothetical protein
YP_002479044.1	KEGG: dvl:Dvul_1771 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase
YP_002479045.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dvl:Dvul_1019 single-strand binding protein
YP_002479046.1	KEGG: dvl:Dvul_1018 hypothetical protein
YP_002479047.1	KEGG: dvu:DVU2224 hypothetical protein
YP_002479048.1	PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: dvl:Dvul_1016 acetyl-CoA carboxylase
YP_002479049.1	PFAM: Protein of unknown function DUF1847; KEGG: pca:Pcar_3043 conserved uncharacterized metal-binding protein
YP_002479050.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: dvl:Dvul_1015 pyruvate carboxylase
YP_002479051.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
YP_002479052.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: dvl:Dvul_1010 GTP-binding protein TypA
YP_002479053.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pau:PA14_45980 putative acetyltransferase
YP_002479054.1	PFAM: protein of unknown function DUF490; KEGG: rru:Rru_A2098 hypothetical protein
YP_002479055.1	PFAM: surface antigen (D15); KEGG: dvu:DVU2102 OMP85 family outer membrane protein
YP_002479056.1	PFAM: Domain of unknown function DUF1791; KEGG: dvl:Dvul_2357 hypothetical protein
YP_002479057.1	PFAM: hydroxyethylthiazole kinase; KEGG: cac:CAC3096 hydroxyethylthiazole kinase
YP_002479058.1	KEGG: lip:LI0332 carbohydrate phosphorylase family protein; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen synthase
YP_002479059.1	PFAM: glycoside hydrolase family 57; KEGG: lip:LI0331 alpha-amylase
YP_002479060.1	PFAM: glycosyl transferase group 1; KEGG: sat:SYN_00881 4-alpha-glucanotransferase
YP_002479061.1	TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: lip:LI0329 Glyen debranching enzyme
YP_002479062.1	PFAM: Extracellular ligand-binding receptor; KEGG: dvl:Dvul_2254 extracellular ligand-binding receptor
YP_002479063.1	PFAM: inner-membrane translocator; KEGG: dvl:Dvul_2253 inner-membrane translocator
YP_002479064.1	PFAM: inner-membrane translocator; KEGG: dvl:Dvul_2252 inner-membrane translocator
YP_002479065.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2251 ABC transporter related
YP_002479066.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2250 ABC transporter related
YP_002479067.1	PFAM: dihydrodipicolinate reductase; KEGG: emi:Emin_0479 hypothetical protein
YP_002479068.1	PFAM: MltA-interacting MipA family protein; KEGG: esa:ESA_02172 hypothetical protein
YP_002479069.1	PFAM: phosphoglycerate kinase; KEGG: dvu:DVU2529 phosphoglycerate kinase
YP_002479070.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: dvu:DVU2530 transketolase
YP_002479071.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: dvu:DVU2531 ribulose-phosphate 3-epimerase
YP_002479073.1	PFAM: regulatory protein MerR; KEGG: dvl:Dvul_0713 MerR family transcriptional regulator
YP_002479074.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_002479076.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_002479077.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_002479078.1	PFAM: ribosomal protein L35; KEGG: dvl:Dvul_0709 50S ribosomal protein L35
YP_002479079.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_002479080.1	TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: dvl:Dvul_0707 threonyl-tRNA synthetase
YP_002479081.1	PFAM: MOSC domain containing protein; KEGG: cpy:Cphy_1481 molybdenum cofactor synthesis domain-containing protein
YP_002479082.1	PFAM: protein of unknown function DUF554; KEGG: sfv:SFV_3025 putative transport protein
YP_002479083.1	PFAM: RNP-1 like RNA-binding protein; KEGG: dvl:Dvul_0803 RNP-1 like RNA-binding protein
YP_002479085.1	KEGG: dvl:Dvul_2814 hypothetical protein
YP_002479086.1	PFAM: phosphatidylglycerophosphatase A; KEGG: dvu:DVU0528 phosphatidylglycerophosphatase
YP_002479087.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_002479088.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: dvl:Dvul_2948 prolipoprotein diacylglyceryl transferase
YP_002479089.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: dvl:Dvul_2691 molybdenum cofactor biosynthesis protein C
YP_002479090.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: dvu:DVU2975 hydrolase, putative
YP_002479092.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
YP_002479093.1	KEGG: dvl:Dvul_0392 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_002479094.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_002479095.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_002479096.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
YP_002479098.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_002479099.1	KEGG: cdf:CD0997 putative signaling protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002479100.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
YP_002479101.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bth:BT_3290 hypothetical protein
YP_002479102.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: dvl:Dvul_2527 rare lipoprotein A
YP_002479103.1	PFAM: peptidase M22 glycoprotease; KEGG: dvl:Dvul_2118 peptidase M22, glycoprotease
YP_002479104.1	KEGG: dvl:Dvul_2117 putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_002479105.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_002479106.1	PFAM: phosphatidate cytidylyltransferase; KEGG: dvl:Dvul_2114 phosphatidate cytidylyltransferase
YP_002479107.1	KEGG: dvl:Dvul_2113 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_002479108.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_002479109.1	Catalyzes the phosphorylation of UMP to UDP
YP_002479110.1	KEGG: dvl:Dvul_2683 hypothetical protein
YP_002479111.1	PFAM: branched-chain amino acid transport; KEGG: dps:DP2464 hypothetical protein
YP_002479112.1	PFAM: AzlC family protein; KEGG: dvl:Dvul_2930 AzlC family protein
YP_002479113.1	PFAM: HPP family protein; KEGG: mgm:Mmc1_0464 HPP family protein+B94
YP_002479114.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_1913 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002479115.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: fno:Fnod_1620 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_002479116.1	KEGG: tde:TDE1177 flavodoxin family protein
YP_002479117.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: glo:Glov_2803 transcriptional regulator, Crp/Fnr family
YP_002479118.1	PFAM: flagellar protein FliS; KEGG: dvl:Dvul_2120 flagellar protein FliS
YP_002479119.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: dvl:Dvul_2119 flagellar hook-associated 2 domain-containing protein
YP_002479120.1	PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_2296 hypothetical protein
YP_002479121.1	PFAM: VacJ family lipoprotein; KEGG: dvl:Dvul_1820 VacJ family lipoprotein
YP_002479122.1	PFAM: toluene tolerance family protein; KEGG: dvl:Dvul_1819 toluene tolerance family protein
YP_002479123.1	PFAM: Mammalian cell entry related domain protein; KEGG: dvl:Dvul_1818 hypothetical protein
YP_002479124.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1817 ABC transporter related
YP_002479125.1	PFAM: protein of unknown function DUF28; KEGG: dvu:DVU2259 hypothetical protein
YP_002479126.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dvl:Dvul_0985 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_002479127.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: mag:amb2978 Cu/Zn superoxide dismutase
YP_002479128.1	KEGG: dvl:Dvul_0984 hypothetical protein
YP_002479129.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tbd:Tbd_1780 dTDP-glucose 4,6-dehydratase
YP_002479130.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pcr:Pcryo_0625 glucose-1-phosphate thymidylyltransferase
YP_002479131.1	KEGG: lip:LIC004 dTDP-6-deoxy-D-glucose-3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_002479132.1	PFAM: protein of unknown function DUF302; KEGG: rde:RD1_1777 hypothetical protein
YP_002479133.1	KEGG: dvu:DVU3143 iron-sulfur cluster-binding protein
YP_002479134.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dvl:Dvul_0706 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_002479135.1	TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: dvl:Dvul_0705 putative CoA-substrate-specific enzyme activase
YP_002479136.1	KEGG: dvl:Dvul_1843 glycosyl transferase family protein
YP_002479137.1	KEGG: dvl:Dvul_1839 hypothetical protein
YP_002479138.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_002479140.1	PFAM: Colicin V production protein; KEGG: dvl:Dvul_1872 colicin V production protein
YP_002479141.1	KEGG: dvu:DVU0579 molybdopterin-guanine dinucleotide biosynthesis protein A, putative
YP_002479142.1	PFAM: molybdopterin binding domain; formylmethanofuran dehydrogenase subunit E region; KEGG: dvl:Dvul_2793 molybdopterin binding domain-containing protein
YP_002479143.1	KEGG: dvu:DVU2812 formate dehydrogenase, alpha subunit, selenocysteine-containing; Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region
YP_002479144.1	KEGG: dvl:Dvul_0502 formate dehydrogenase, beta subunit, putative
YP_002479145.1	PFAM: formate dehydrogenase accessory protein; KEGG: dvl:Dvul_0503 formate dehydrogenase formation protein FdhE, putative
YP_002479146.1	PFAM: cytochrome c class III; KEGG: dvl:Dvul_0504 cytochrome c, class III
YP_002479147.1	KEGG: dvl:Dvul_1519 phenylacetate--CoA ligase
YP_002479148.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: dvl:Dvul_1517 iojap-like protein
YP_002479149.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_002479150.1	KEGG: dvl:Dvul_1515 hypothetical protein
YP_002479151.1	KEGG: dvl:Dvul_2176 hypothetical protein
YP_002479152.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_2888 phosphate ABC transporter, inner membrane subunit PstA
YP_002479153.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_2887 phosphate ABC transporter, inner membrane subunit PstC
YP_002479154.1	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sat:SYN_00056 ABC-type phosphate transport system, periplasmic component
YP_002479155.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dvl:Dvul_1911 two component transcriptional regulator
YP_002479156.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: scl:sce3423 sensory box histidine kinase PhoR
YP_002479157.1	KEGG: dol:Dole_1928 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase
YP_002479158.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: scl:sce2942 phosphate transport system regulatory protein PhoU
YP_002479159.1	PFAM: protein of unknown function UPF0153; KEGG: tye:THEYE_A0258 hypothetical protein
YP_002479160.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00367 sulfate transport ATP-binding protein
YP_002479161.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sat:SYN_00366 sulfate transport system permease protein
YP_002479162.1	KEGG: sat:SYN_00365 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
YP_002479163.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sfu:Sfum_1011 nitrogenase cofactor biosynthesis protein NifB
YP_002479164.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1960 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_002479165.1	KEGG: sfu:Sfum_1959 putative molybdenum ABC transporter, solute-binding protein
YP_002479166.1	KEGG: dvl:Dvul_1290 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_002479167.1	KEGG: lip:LI0125 hypothetical protein
YP_002479168.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: dvl:Dvul_1288 chaperone DnaJ domain-containing protein
YP_002479169.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_002479170.1	KEGG: dvu:DVU0799 hypothetical protein
YP_002479171.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_002479172.1	PFAM: thymidylate synthase complementing protein ThyX; KEGG: gbm:Gbem_3711 thymidylate synthase, flavin-dependent
YP_002479173.1	PFAM: O-antigen polymerase; KEGG: lip:LI0825 lipid A core-O-antigen ligase and related enzymes
YP_002479174.1	PFAM: protein of unknown function DUF88; KEGG: dvl:Dvul_1187 hypothetical protein
YP_002479175.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: lip:LI0129 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_002479176.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: lip:LI0129 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_002479177.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_1825 polar amino acid ABC transporter, inner membrane subunit
YP_002479178.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1826 ABC transporter related
YP_002479179.1	PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: dvl:Dvul_2170 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_002479180.1	KEGG: dvl:Dvul_0631 hypothetical protein
YP_002479181.1	PFAM: sodium/calcium exchanger membrane region; KEGG: dvl:Dvul_0633 sodium/calcium exchanger membrane region
YP_002479182.1	KEGG: dvl:Dvul_2123 hypothetical protein
YP_002479183.1	KEGG: dvl:Dvul_2125 putative lipoprotein
YP_002479184.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_0906 tRNA guanosine-2'-O-methyltransferase
YP_002479185.1	PFAM: cyclase family protein; KEGG: cbe:Cbei_0277 cyclase family protein
YP_002479186.1	PFAM: regulatory protein MarR; KEGG: mma:MM_1903 MarR family transcriptional regulator
YP_002479187.1	KEGG: dvl:Dvul_1183 hypothetical protein
YP_002479188.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: dvl:Dvul_1185 excinuclease ABC, A subunit
YP_002479189.1	TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cpf:CPF_0784 alkyl hydroperoxide reductase, C subunit
YP_002479190.1	PFAM: ferric-uptake regulator; KEGG: scl:sce0007 ferric uptake regulation protein
YP_002479192.1	PFAM: thioesterase superfamily protein; KEGG: dvl:Dvul_2098 thioesterase superfamily protein
YP_002479193.1	PFAM: MltA domain protein; 3D domain protein; KEGG: dvl:Dvul_2097 MltA domain-containing protein
YP_002479194.1	TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: dvl:Dvul_0895 Fis family transcriptional regulator
YP_002479195.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: dvl:Dvul_0893 outer membrane chaperone Skp (OmpH)
YP_002479196.1	PFAM: cell wall hydrolase/autolysin; KEGG: dvu:DVU2371 N-acetylmuramoyl-L-alanine amidase, putative
YP_002479197.1	PFAM: Protein of unknown function CGGC region; KEGG: cbf:CLI_0908 CGGC domain-containing protein
YP_002479198.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: dvl:Dvul_0891 surface antigen (D15)
YP_002479199.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_0890 ABC transporter related
YP_002479200.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: dvl:Dvul_0889 LolC/E family lipoprotein releasing system, transmembrane protein
YP_002479201.1	KEGG: hsm:HSM_1276 NapC/NirT cytochrome c domain-containing protein
YP_002479202.1	KEGG: ade:Adeh_0909 hypothetical protein
YP_002479203.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_0908 periplasmic nitrate reductase subunit NapA apoprotein
YP_002479205.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY4077 hypothetical protein
YP_002479206.1	KEGG: shl:Shal_0713 quinol dehydrogenase membrane component
YP_002479207.1	TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dvl:Dvul_0888 lysyl-tRNA synthetase
YP_002479208.1	PFAM: amino acid-binding ACT domain protein; KEGG: sfu:Sfum_2949 amino acid-binding ACT domain protein
YP_002479209.1	PFAM: protein of unknown function DUF711; KEGG: lip:LI0872 hypothetical protein
YP_002479212.1	PFAM: protein of unknown function DUF1090; KEGG: ypb:YPTS_3669 hypothetical protein
YP_002479213.1	PFAM: protein of unknown function DUF81; KEGG: ppf:Pput_0520 hypothetical protein
YP_002479214.1	PFAM: protein of unknown function DUF486; KEGG: dvl:Dvul_0419 hypothetical protein
YP_002479215.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_002479216.1	PFAM: cation transporter; KEGG: dvu:DVU0413 TrkH family potassium uptake protein
YP_002479217.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: dvl:Dvul_2522 TrkA domain-containing protein
YP_002479218.1	PFAM: protein of unknown function DUF45; KEGG: cli:Clim_1657 protein of unknown function DUF45
YP_002479219.1	KEGG: LOC686844; hypothetical protein LOC686844
YP_002479220.1	PFAM: Rubrerythrin; KEGG: lip:LI0696 rubrerythrin
YP_002479221.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: dvl:Dvul_1978 TolC family type I secretion outer membrane protein
YP_002479222.1	KEGG: dvl:Dvul_1977 ABC transporter related; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_002479223.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dvl:Dvul_1976 HlyD family type I secretion membrane fusion protein
YP_002479224.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: dvl:Dvul_1974 putative PAS/PAC sensor protein
YP_002479225.1	PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4925 glycosyl transferase, group 1
YP_002479226.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; extracellular solute-binding protein family 3; KEGG: cdf:CD1476 putative signaling protein
YP_002479227.1	PFAM: helix-turn-helix domain protein; KEGG: hau:Haur_2753 XRE family transcriptional regulator
YP_002479228.1	PFAM: aminotransferase class V; KEGG: ade:Adeh_2994 alanine-glyoxylate aminotransferase
YP_002479229.1	PFAM: amino acid permease-associated region; KEGG: pae:PA3000 aromatic amino acid transport protein AroP1
YP_002479230.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_2613 hypothetical protein
YP_002479231.1	PFAM: FeoA family protein; KEGG: rrs:RoseRS_0553 FeoA family protein
YP_002479232.1	PFAM: FeoA family protein; KEGG: afw:Anae109_4104 FeoA family protein
YP_002479233.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: abu:Abu_1854 ferrous iron transport protein B
YP_002479234.1	KEGG: abu:Abu_1855 hypothetical protein
YP_002479235.1	KEGG: rpc:RPC_1958 hypothetical protein
YP_002479236.1	KEGG: drm:Dred_3287 hypothetical protein
YP_002479237.1	PFAM: protein of unknown function DUF615; KEGG: lch:Lcho_1222 hypothetical protein
YP_002479238.1	TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: dvl:Dvul_2015 4-hydroxybenzoate polyprenyltransferase, putative
YP_002479239.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: dvl:Dvul_2017 molybdenum cofactor synthesis domain-containing protein
YP_002479240.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_002479241.1	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: dvu:DVU3063 integral membrane protein MviN
YP_002479242.1	KEGG: dvl:Dvul_0315 multi-sensor hybrid histidine kinase
YP_002479243.1	KEGG: dvl:Dvul_0317 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_002479244.1	PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0431 response regulator receiver
YP_002479246.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_002479247.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_002479248.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_002479249.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_002479250.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_002479251.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_002479252.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_002479253.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_002479254.1	PFAM: ribosomal protein L29; KEGG: dvl:Dvul_1757 50S ribosomal protein L29
YP_002479255.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_002479256.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_002479257.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_002479258.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_002479259.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_002479260.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_002479261.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_002479262.1	binds 5S rRNA along with protein L5 and L25
YP_002479263.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_002479264.1	PFAM: ribosomal protein L30; KEGG: amt:Amet_4460 ribosomal protein L30
YP_002479265.1	late assembly protein
YP_002479266.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_002479267.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: dvl:Dvul_1744 methionine aminopeptidase, type I
YP_002479268.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_002479269.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_002479270.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_002479271.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_002479272.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_002479273.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_002479274.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gme:Gmet_0361 short chain dehydrogenase
YP_002479275.1	TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dvl:Dvul_1736 selenide, water dikinase
YP_002479276.1	TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: dvl:Dvul_1735 trigger factor
YP_002479277.1	PFAM: peptidase S14 ClpP; KEGG: lip:LI0794 protease subunit of ATP-dependent Clp proteases
YP_002479278.1	binds and unfolds substrates as part of the ClpXP protease
YP_002479280.1	KEGG: dvl:Dvul_1732 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002479281.1	KEGG: dvl:Dvul_0352 hypothetical protein
YP_002479282.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_002479283.1	KEGG: dvu:DVU0912 hypothetical protein
YP_002479284.1	TIGRFAM: flagellar export protein FliJ; KEGG: dvl:Dvul_2071 flagellar export protein FliJ
YP_002479285.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: dvu:DVU0931 phosphomethylpyrimidine kinase
YP_002479286.1	KEGG: dvu:DVU1005 hypothetical protein
YP_002479287.1	KEGG: dvl:Dvul_1982 cobalbumin biosynthesis enzyme
YP_002479288.1	KEGG: dvl:Dvul_1981 hypothetical protein
YP_002479293.1	KEGG: ecv:APECO1_4051 hypothetical protein
YP_002479294.1	KEGG: nmu:Nmul_A1437 GCN5-related N-acetyltransferase
YP_002479295.1	KEGG: dvu:DVU1714 hypothetical protein
YP_002479296.1	KEGG: bvi:Bcep1808_1285 hypothetical protein
YP_002479297.1	KEGG: mbb:BCG_0623c PE-PGRS family protein
YP_002479298.1	KEGG: dvl:Dvul_0652 hypothetical protein
YP_002479299.1	KEGG: CORO1B, LOC476007; coronin, actin binding protein, 1B
YP_002479300.1	KEGG: ppg:PputGB1_1751 hypothetical protein
YP_002479301.1	KEGG: ppg:PputGB1_1750 hypothetical protein
YP_002479303.1	KEGG: dvl:Dvul_0646 hypothetical protein
YP_002479304.1	KEGG: dvu:DVU1723 hypothetical protein
YP_002479305.1	KEGG: mms:mma_2206 hypothetical protein
YP_002479307.1	KEGG: rce:RC1_1109 hypothetical protein
YP_002479308.1	KEGG: dvu:DVU1507 hypothetical protein
YP_002479309.1	PFAM: protein of unknown function DUF847; KEGG: dvu:DVU2866 hypothetical protein
YP_002479310.1	PFAM: Mor transcription activator domain protein; KEGG: lip:LI0834 hypothetical protein
YP_002479312.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: dvu:DVU1144 Cro/CI family transcriptional regulator
YP_002479313.1	PFAM: nucleic acid binding OB-fold tRNA/helicase-type; conserved hypothetical protein; KEGG: pmr:PMI3093 hypothetical protein
YP_002479314.1	PFAM: nucleic acid binding OB-fold tRNA/helicase-type; conserved hypothetical protein; KEGG: sdy:SDY_3215 hypothetical protein
YP_002479315.1	PFAM: conserved hypothetical protein; KEGG: spl:Spea_4112 hypothetical protein
YP_002479316.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: har:HEAR0051 putative two-component system regulatory protein
YP_002479317.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mms:mma_0058 two-component system sensor histidine kinase ColS
YP_002479318.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ypy:YPK_1332 RND family efflux transporter MFP subunit
YP_002479319.1	PFAM: acriflavin resistance protein; KEGG: rpi:Rpic_4183 acriflavin resistance protein
YP_002479320.1	PFAM: acriflavin resistance protein; KEGG: mms:mma_1682 AcrB/AcrD/AcrF family membrane protein
YP_002479322.1	PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: dvl:Dvul_1882 integral membrane protein MviN
YP_002479323.1	KEGG: dvl:Dvul_0774 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain
YP_002479324.1	PFAM: protein of unknown function UPF0005; KEGG: dvl:Dvul_0772 hypothetical protein
YP_002479325.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pen:PSEEN2085 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
YP_002479326.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_002479327.1	PFAM: protein of unknown function DUF140; KEGG: dvu:DVU1246 hypothetical protein
YP_002479328.1	PFAM: Sporulation domain protein; KEGG: dvl:Dvul_1815 sporulation domain-containing protein
YP_002479329.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_002479330.1	PFAM: Acyl transferase; KEGG: dvl:Dvul_1813 malonyl CoA-acyl carrier protein transacylase
YP_002479331.1	PFAM: glucose inhibited division protein; KEGG: dvl:Dvul_1812 glucose inhibited division protein
YP_002479332.1	PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: dvu:DVU1252 hypothetical protein
YP_002479333.1	PFAM: protein of unknown function DUF163; KEGG: dvl:Dvul_1809 hypothetical protein
YP_002479334.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: dvl:Dvul_1808 SUA5/YciO/YrdC/YwlC family protein
YP_002479335.1	PFAM: regulatory protein MarR; SMART: iron dependent repressor; KEGG: cac:CAC0162 MarR family transcriptional regulator
YP_002479336.1	PFAM: NUDIX hydrolase; KEGG: dvl:Dvul_0997 NUDIX hydrolase
YP_002479337.1	PFAM: Carboxylyase-related protein; KEGG: dvu:DVU2320 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein
YP_002479338.1	KEGG: dvl:Dvul_1524 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase
YP_002479339.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_002479340.1	KEGG: dvl:Dvul_1593 hypothetical protein
YP_002479341.1	PFAM: 4-vinyl reductase 4VR; KEGG: mhu:Mhun_2966 4-vinyl reductase, 4VR
YP_002479344.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: maq:Maqu_2940 sensor diguanylate cyclase
YP_002479345.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dvu:DVU0318 TPR domain-containing protein
YP_002479346.1	KEGG: dvu:DVU1028 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region
YP_002479347.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: dvl:Dvul_1964 histidinol-phosphate aminotransferase
YP_002479348.1	PFAM: UspA domain protein; KEGG: dvl:Dvul_1963 UspA domain-containing protein
YP_002479349.1	KEGG: dvl:Dvul_1962 hypothetical protein
YP_002479351.1	KEGG: pca:Pcar_1711 hypothetical protein
YP_002479352.1	KEGG: nAcRalpha-7E; nicotinic Acetylcholine Receptor   alpha 7E; K05312 cholinergic receptor, nicotinic,   invertebrate
YP_002479353.1	KEGG: fno:Fnod_0248 hypothetical protein
YP_002479354.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: dol:Dole_0426 signal transduction histidine kinase, nitrogen specific, NtrB
YP_002479355.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dol:Dole_0427 two component, sigma54 specific, Fis family transcriptional regulator
YP_002479356.1	PFAM: diacylglycerol kinase; KEGG: azo:azo0859 probable diacylglycerol kinase
YP_002479357.1	KEGG: ctc:CTC01028 alkaline phosphatase
YP_002479359.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gme:Gmet_0369 NADH ubiquinone oxidoreductase, 20 kDa subunit
YP_002479360.1	KEGG: gsu:GSU0743 NAD-dependent dehydrogenase subunit
YP_002479361.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gme:Gmet_0372 NADH/ubiquinone/plastoquinone (complex I)
YP_002479362.1	KEGG: gbm:Gbem_3190 NAD-dependent dehydrogenase subunit
YP_002479363.1	KEGG: ade:Adeh_3656 respiratory-chain NADH dehydrogenase, subunit 1
YP_002479364.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: afw:Anae109_3780 NADH dehydrogenase (quinone)
YP_002479365.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: dvl:Dvul_0782 NAD-dependent epimerase/dehydratase
YP_002479366.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: dvl:Dvul_0185 TatD family hydrolase
YP_002479367.1	TIGRFAM: phosphate binding protein; KEGG: lip:LI1028 phosphate-binding protein
YP_002479368.1	KEGG: lip:LI1029 phosphate transporter permease PstC
YP_002479369.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0591 binding-protein-dependent transport systems inner membrane component
YP_002479370.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lip:LI1031 phosphate ABC transporter ATP-binding protein
YP_002479371.1	TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoyltransferase and lipoate-protein ligase; KEGG: bcy:Bcer98_0839 lipoyltransferase and lipoate-protein ligase
YP_002479372.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: dvu:DVU1684 glycine cleavage system T protein
YP_002479373.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: dvl:Dvul_1650 glycine cleavage system H protein
YP_002479374.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein
YP_002479375.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein
YP_002479376.1	PFAM: protein of unknown function DUF208; KEGG: dvl:Dvul_0320 hypothetical protein
YP_002479377.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: dvu:DVU3055 ribonuclease
YP_002479378.1	PFAM: metallophosphoesterase; KEGG: dvu:DVU0367 Ser/Thr protein phosphatase family protein
YP_002479379.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: dvu:DVU0366 5-formyltetrahydrofolate cyclo-ligase family protein
YP_002479380.1	PFAM: protein of unknown function DUF152; KEGG: dvl:Dvul_2619 hypothetical protein
YP_002479382.1	PFAM: transport system permease protein; KEGG: dvl:Dvul_2311 transport system permease protein
YP_002479383.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU0648 iron compound ABC transporter, ATP-binding protein
YP_002479384.1	PFAM: periplasmic binding protein; KEGG: dvl:Dvul_2313 periplasmic binding protein
YP_002479385.1	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvl:Dvul_2314 precorrin-2 C20-methyltransferase
YP_002479386.1	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dvl:Dvul_2656 hydrogenase expression/formation protein HypE
YP_002479387.1	PFAM: hydrogenase formation HypD protein; KEGG: dvl:Dvul_2657 hydrogenase formation HypD protein
YP_002479388.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_002479389.1	PFAM: Domain of unknown function DUF1844; KEGG: dvl:Dvul_2448 hypothetical protein
YP_002479390.1	PFAM: aminotransferase class V; KEGG: dvu:DVU0494 aminotransferase, class V
YP_002479392.1	KEGG: dvl:Dvul_1351 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase
YP_002479393.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_002479394.1	KEGG: dvl:Dvul_1353 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_002479395.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: dvl:Dvul_1354 magnesium transporter
YP_002479396.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sus:Acid_7878 two component LuxR family transcriptional regulator
YP_002479397.1	PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_0412 hypothetical protein
YP_002479398.1	KEGG: dvl:Dvul_0411 hypothetical protein
YP_002479399.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0408 integral membrane sensor signal transduction histidine kinase
YP_002479400.1	PFAM: response regulator receiver; KEGG: dvl:Dvul_0407 response regulator receiver protein
YP_002479401.1	KEGG: dvl:Dvul_0406 hypothetical protein
YP_002479402.1	PFAM: response regulator receiver; KEGG: dvl:Dvul_0404 response regulator receiver protein
YP_002479403.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvu:DVU2967 sensor histidine kinase/response regulator
YP_002479404.1	KEGG: cvi:CV_4287 hypothetical protein
YP_002479405.1	PFAM: CI repressor; peptidase S24 and S26 domain protein; KEGG: dvu:DVU2686 S24 family peptidase
YP_002479406.1	KEGG: spl:Spea_1850 hypothetical protein
YP_002479407.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvu:DVU2309 methyl-accepting chemotaxis protein, putative
YP_002479408.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dvl:Dvul_0958 substrate-binding region of ABC-type glycine betaine transport system
YP_002479409.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0957 binding-protein-dependent transport systems inner membrane component
YP_002479410.1	KEGG: dvl:Dvul_0956 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase
YP_002479411.1	KEGG: msm:MSMEG_1846 polysulphide reductase, NrfD
YP_002479412.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmi:MMAR_5196 Fe-S-cluster-containing hydrogenase, HybA
YP_002479413.1	KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region
YP_002479414.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: cpe:CPE1793 molybdenum cofactor biosynthesis protein MoeA
YP_002479415.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pca:Pcar_1840 formate dehydrogenase accessory protein
YP_002479417.1	KEGG: afw:Anae109_2612 cellulose biosynthesis (CelD)-like protein
YP_002479418.1	KEGG: seh:SeHA_C4728 heat resistant agglutinin 1
YP_002479419.1	PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: dvl:Dvul_0991 chromosomal replication initiator protein DnaA
YP_002479420.1	TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: lip:LI0442 processing of HyaA and HyaB proteins
YP_002479421.1	TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: sbc:SbBS512_E2341 Ni/Fe-hydrogenase 1 B-type cytochrome subunit HyaC
YP_002479422.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: lip:LI0440 hydrogenase-1 large subunit
YP_002479423.1	KEGG: lip:LI0439 hydrogenase-1 small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_002479425.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pis:Pisl_0176 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002479426.1	PFAM: Nitrate reductase gamma subunit; KEGG: afu:AF0545 hypothetical protein
YP_002479427.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dvl:Dvul_1205 BadM/Rrf2 family transcriptional regulator
YP_002479428.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dvl:Dvul_1204 BadM/Rrf2 family transcriptional regulator
YP_002479429.1	KEGG: dvl:Dvul_1201 response regulator receiver protein
YP_002479430.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_2410 hypothetical protein
YP_002479431.1	KEGG: dvl:Dvul_2409 hmc operon protein 5
YP_002479432.1	KEGG: dvl:Dvul_2405 cytochrome c, class III
YP_002479434.1	PFAM: SEC-C motif domain protein; KEGG: dvl:Dvul_2736 SecC motif-containing protein
YP_002479435.1	KEGG: dvl:Dvul_2735 hypothetical protein
YP_002479436.1	PFAM: phosphoglucose isomerase (PGI); KEGG: dvu:DVU3222 glucose-6-phosphate isomerase
YP_002479437.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0167 integral membrane sensor signal transduction histidine kinase
YP_002479438.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvu:DVU3220 sigma-54 dependent transcriptional regulator/response regulator
YP_002479439.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: cko:CKO_04630 transcriptional regulator NanR
YP_002479440.1	PFAM: amidohydrolase 2; KEGG: dvu:DVU0885 amidohydrolase family protein
YP_002479441.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dvl:Dvul_1662 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_002479442.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: lip:LI0691 outer membrane protein and related peptidoglycan-associated (LipO)proteins
YP_002479443.1	PFAM: WD40 domain protein beta Propeller; KEGG: dvl:Dvul_0278 WD40 domain-containing protein
YP_002479444.1	KEGG: dvl:Dvul_0279 TonB family protein
YP_002479445.1	TIGRFAM: protein TolA; KEGG: dvl:Dvul_0280 TonB domain-containing protein
YP_002479446.1	TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvl:Dvul_0281 biopolymer transport protein ExbD/TolR
YP_002479447.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvl:Dvul_0282 MotA/TolQ/ExbB proton channel
YP_002479448.1	PFAM: outer membrane efflux protein; KEGG: dvl:Dvul_0283 outer membrane efflux protein
YP_002479449.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dvu:DVU0876 metallo-beta-lactamase family protein
YP_002479451.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: lip:LI0675 membrane protease subunits, stomatin/prohibitin homologs
YP_002479452.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: lip:LI0676 membrane protease subunits, stomatin/prohibitin homologs
YP_002479453.1	PFAM: CI repressor; peptidase S24 and S26 domain protein; KEGG: dvl:Dvul_2281 putative phage repressor
YP_002479454.1	KEGG: dvu:DVU0677 transglycosylase domain-containing protein
YP_002479456.1	KEGG: dvl:Dvul_2650 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002479457.1	KEGG: dvl:Dvul_2649 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: phosphoribosylglycinamide synthetase; D-alanine--D-alanine ligase domain protein
YP_002479458.1	PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: dsy:DSY1618 hypothetical protein
YP_002479459.1	PFAM: UbiA prenyltransferase; KEGG: sat:SYN_02622 1,4-dihydroxy-2-naphthoate polyprenyltransferase
YP_002479460.1	KEGG: dvl:Dvul_2887 polysaccharide biosynthesis domain-containing protein
YP_002479461.1	TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: dvu:DVU0073 CDP-glucose-4,6-dehydratase, putative
YP_002479462.1	TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: dvl:Dvul_2889 glucose-1-phosphate cytidylyltransferase
YP_002479463.1	KEGG: bbr:BB0586 hypothetical protein
YP_002479464.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: dvl:Dvul_0152 small GTP-binding protein
YP_002479465.1	PFAM: MGS domain protein; KEGG: dvu:DVU3235 IMP cyclohydrolase, putative
YP_002479466.1	KEGG: dvl:Dvul_0130 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_002479467.1	PFAM: FAD linked oxidase domain protein; KEGG: dvu:DVU0827 glycolate oxidase, subunit GlcD, putative
YP_002479468.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_2155 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002479471.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0116 TPR repeat-containing protein
YP_002479472.1	KEGG: dvl:Dvul_0115 hypothetical protein
YP_002479473.1	PFAM: protein of unknown function UPF0153; KEGG: dvl:Dvul_0114 hypothetical protein
YP_002479474.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0113 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002479475.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: dvl:Dvul_0112 peptidase S1 and S6, chymotrypsin/Hap
YP_002479476.1	KEGG: dvl:Dvul_0111 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_002479477.1	KEGG: dvl:Dvul_0110 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_002479478.1	KEGG: dvu:DVU2332 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
YP_002479479.1	PFAM: nucleoside diphosphate kinase; KEGG: dvl:Dvul_0925 nucleoside-diphosphate kinase
YP_002479480.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: dvl:Dvul_0924 protein of unknown function DUF610, YibQ
YP_002479481.1	KEGG: dvu:DVU2336 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_002479482.1	PFAM: Rubrerythrin; KEGG: dvl:Dvul_0940 rubrerythrin
YP_002479483.1	PFAM: protein of unknown function DUF985; KEGG: gsu:GSU0173 hypothetical protein
YP_002479484.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: dvl:Dvul_0944 hypothetical protein
YP_002479485.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dvl:Dvul_2499 RND family efflux transporter MFP subunit
YP_002479486.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_002479487.1	KEGG: sfu:Sfum_3171 sugar kinase
YP_002479488.1	KEGG: sfu:Sfum_3170 hypothetical protein
YP_002479489.1	KEGG: pca:Pcar_0821 hypothetical protein
YP_002479490.1	KEGG: sfu:Sfum_3168 hypothetical protein
YP_002479491.1	regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity
YP_002479492.1	KEGG: dvl:Dvul_1688 HesB/YadR/YfhF-family protein
YP_002479493.1	KEGG: dvl:Dvul_1688 HesB/YadR/YfhF-family protein
YP_002479494.1	PFAM: HesB/YadR/YfhF-family protein; KEGG: dvl:Dvul_1688 HesB/YadR/YfhF-family protein
YP_002479495.1	KEGG: dvl:Dvul_1260 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_002479496.1	KEGG: dvl:Dvul_1261 hypothetical protein
YP_002479497.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: dvl:Dvul_1262 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_002479498.1	KEGG: dvl:Dvul_1263 hypothetical protein
YP_002479499.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: dvl:Dvul_1264 DNA repair protein RecO
YP_002479500.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_002479501.1	KEGG: dvu:DVU1897 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit
YP_002479502.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_002479503.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rba:RB9570 hydrogenase-4 transcriptional activator
YP_002479504.1	PFAM: Dissimilatory sulfite reductase D; KEGG: dvl:Dvul_2530 dissimilatory sulfite reductase B
YP_002479505.1	KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region
YP_002479506.1	KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region
YP_002479507.1	KEGG: gur:Gura_0826 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicases
YP_002479508.1	TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: gur:Gura_0827 CRISPR-associated CSE1 family protein
YP_002479509.1	TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; KEGG: gur:Gura_0828 hypothetical protein
YP_002479510.1	TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: gur:Gura_0829 CRISPR-associated CSE3 family protein
YP_002479511.1	TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: gur:Gura_0830 CRISPR-associated CSE4 family protein
YP_002479512.1	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: gur:Gura_0831 CRISPR-associated Cas5 family protein
YP_002479513.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: pmy:Pmen_3755 CRISPR-associated Cas1 family protein
YP_002479514.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: mhu:Mhun_1374 hypothetical protein
YP_002479515.1	PFAM: conserved hypothetical protein; KEGG: dvl:Dvul_2400 hypothetical protein
YP_002479516.1	KEGG: dvl:Dvul_2399 hypothetical protein
YP_002479517.1	KEGG: dvl:Dvul_2398 hypothetical protein
YP_002479518.1	PFAM: formate/nitrite transporter; KEGG: pmr:PMI0706 probable formate transporter
YP_002479519.1	KEGG: hypothetical protein
YP_002479521.1	KEGG: rru:Rru_A1249 kinase-like
YP_002479522.1	KEGG: pst:PSPTO_1100 phage integrase family site specific recombinase
YP_002479523.1	PFAM: Domain of unkown function DUF1786 putative pyruvate format-lyase activating enzyme; KEGG: dvl:Dvul_0572 hypothetical protein
YP_002479524.1	KEGG: dvl:Dvul_0571 phenylacetate--CoA ligase
YP_002479525.1	PFAM: protein of unknown function DUF456; KEGG: dvl:Dvul_0570 hypothetical protein
YP_002479526.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_0569 tRNA/rRNA methyltransferase (SpoU)
YP_002479527.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1674 methyl-accepting chemotaxis sensory transducer
YP_002479528.1	PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA
YP_002479529.1	PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit
YP_002479530.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1674 methyl-accepting chemotaxis sensory transducer
YP_002479531.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_002479532.1	KEGG: dvl:Dvul_1731 hypothetical protein
YP_002479534.1	KEGG: dvl:Dvul_1729 putative lipoprotein
YP_002479535.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_002479536.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_002479537.1	KEGG: dvu:DVU1346 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type
YP_002479538.1	PFAM: Peptidase M23; KEGG: dvl:Dvul_1721 peptidase M23B
YP_002479539.1	PFAM: Exonuclease VII small subunit; KEGG: dvl:Dvul_1720 exonuclease VII, small subunit
YP_002479540.1	PFAM: Polyprenyl synthetase; KEGG: dvl:Dvul_1719 polyprenyl synthetase
YP_002479541.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_002479542.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: dvl:Dvul_1620 tRNA(Ile)-lysidine synthetase
YP_002479543.1	KEGG: dvl:Dvul_1619 hypothetical protein
YP_002479544.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_002479545.1	PFAM: cytochrome c assembly protein; KEGG: dvl:Dvul_1617 cytochrome c assembly protein
YP_002479546.1	TIGRFAM: siroheme synthase; KEGG: dvu:DVU1463 siroheme synthase
YP_002479547.1	KEGG: dvu:DVU1464 heptosyltransferase family protein
YP_002479548.1	KEGG: dvl:Dvul_1614 hypothetical protein
YP_002479549.1	KEGG: dvl:Dvul_1157 hypothetical protein
YP_002479550.1	TIGRFAM: tol-pal system protein YbgF; KEGG: dvl:Dvul_1158 TPR repeat-containing protein
YP_002479551.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: dvl:Dvul_1159 DNA protecting protein DprA
YP_002479552.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: lip:LI0111 site-specific recombinase XerC
YP_002479553.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_002479554.1	KEGG: dvl:Dvul_1499 hypothetical protein
YP_002479555.1	PFAM: PTS system sorbose subfamily IIB component; KEGG: dvl:Dvul_1500 PTS system sorbose subfamily IIB component
YP_002479556.1	PFAM: PTS system fructose subfamily IIA component; KEGG: dvl:Dvul_1501 PTS system fructose subfamily IIA component
YP_002479557.1	PFAM: conserved hypothetical protein; KEGG: dvl:Dvul_1502 hypothetical protein
YP_002479558.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: dvl:Dvul_1504 sigma 54 modulation protein/ribosomal protein S30EA
YP_002479559.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: dvl:Dvul_1505 RNA polymerase, sigma 54 subunit, RpoN
YP_002479560.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_002479561.1	KEGG: dvl:Dvul_1512 phosphoribosylformylglycinamidine synthase I
YP_002479562.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: dvl:Dvul_1164 2-nitropropane dioxygenase, NPD
YP_002479563.1	KEGG: dvl:Dvul_1165 hypothetical protein
YP_002479564.1	PFAM: UvrD/REP helicase; KEGG: dvu:DVU2062 ATP-dependent DNA helicase UvrD
YP_002479565.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pap:PSPA7_1904 RhaT protein
YP_002479566.1	KEGG: dvl:Dvul_0935 hypothetical protein
YP_002479567.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_002479568.1	PFAM: amino acid permease-associated region; KEGG: smt:Smal_0405 amino acid permease-associated region
YP_002479570.1	PFAM: heat shock protein DnaJ domain protein; KEGG: dvu:DVU1003 DnaJ domain-containing protein
YP_002479571.1	PFAM: protein of unknown function UPF0153; KEGG: dvl:Dvul_1987 hypothetical protein
YP_002479572.1	KEGG: dvl:Dvul_1988 CoA-binding domain-containing protein
YP_002479573.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: dvu:DVU2302 glutathione-regulated potassium-efflux system protein KefB, putative
YP_002479574.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pho:PH1235 ferrichrome transport ATP-binding protein
YP_002479575.1	PFAM: transport system permease protein; KEGG: dol:Dole_1652 transport system permease protein
YP_002479576.1	PFAM: periplasmic binding protein; KEGG: pab:PAB0676 iron (III) ABC transporter, ATP-binding protein (hemv-3)
YP_002479577.1	PFAM: Methyltransferase type 11; KEGG: ccv:CCV52592_0091 hypothetical protein
YP_002479578.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ppd:Ppro_1253 TonB-dependent receptor, plug
YP_002479579.1	PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: det:DET1173 FwdE family protein
YP_002479580.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mma:MM_2563 ferredoxin
YP_002479581.1	TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: dvl:Dvul_1968 uracil phosphoribosyltransferase
YP_002479582.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: dvl:Dvul_1967 uracil-xanthine permease
YP_002479584.1	KEGG: dvl:Dvul_0609 putative lipoprotein
YP_002479585.1	KEGG: smt:Smal_1211 secretion protein HlyD family protein
YP_002479586.1	PFAM: TPR repeat-containing protein; protein of unknown function DUF181; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_1028 hypothetical protein
YP_002479587.1	PFAM: methyltransferase small; KEGG: dvl:Dvul_1029 methyltransferase small
YP_002479589.1	PFAM: ribosomal L11 methyltransferase; KEGG: dvl:Dvul_0920 ribosomal L11 methyltransferase
YP_002479591.1	PFAM: Peptidase M23; KEGG: cya:CYA_1895 M23B family peptidase
YP_002479592.1	PFAM: Pirin domain protein; KEGG: lip:LI0289 pirin-related protein
YP_002479593.1	PFAM: periplasmic solute binding protein; KEGG: cyb:CYB_0144 putative zinc ABC transporter, periplasmic zinc-binding protein
YP_002479594.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_4497 ABC transporter related
YP_002479595.1	PFAM: ABC-3 protein; KEGG: cpy:Cphy_3489 ABC-3 protein
YP_002479596.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: dvl:Dvul_1832 redoxin domain-containing protein
YP_002479597.1	heat shock protein involved in degradation of misfolded proteins
YP_002479598.1	PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: afw:Anae109_1408 glycosyl transferase family protein
YP_002479599.1	PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_4738 methyltransferase type 11
YP_002479600.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bpy:Bphyt_0888 UDP-N-acetylglucosamine 2-epimerase
YP_002479601.1	PFAM: LicD family protein; KEGG: cpf:CPF_0917 LicD family protein
YP_002479602.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hhe:HH0078 phosphoserine phosphatase
YP_002479603.1	KEGG: hhe:HH0077 hypothetical protein
YP_002479604.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hhe:HH0074 hypothetical protein
YP_002479605.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: hhe:HH0075 aspartate racemase
YP_002479606.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: dvl:Dvul_1990 cytochrome c biogenesis protein, transmembrane region
YP_002479607.1	PFAM: CheW domain protein; KEGG: dvl:Dvul_1259 putative CheW protein
YP_002479608.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cbf:CLI_1065 acetyltransferase
YP_002479609.1	KEGG: dvl:Dvul_1258 hypothetical protein
YP_002479610.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1432 radical SAM domain-containing protein
YP_002479611.1	KEGG: dvl:Dvul_1643 hypothetical protein
YP_002479612.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_002479613.1	PFAM: flagellin domain protein; KEGG: dvl:Dvul_0790 flagellin domain-containing protein
YP_002479614.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2048 ABC transporter ATP-binding protein
YP_002479615.1	with NikABDE is involved in nickel transport into the cell
YP_002479616.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_03851 nickel transport protein (ABC superfamily, membrane)
YP_002479617.1	KEGG: rru:Rru_A2277 nickel ABC transporter, periplasmic nickel-binding; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5
YP_002479618.1	PFAM: conserved hypothetical protein; KEGG: drm:Dred_1452 hypothetical protein
YP_002479619.1	KEGG: tye:THEYE_A0243 hypothetical protein
YP_002479621.1	PFAM: protein of unknown function DUF523; KEGG: dvl:Dvul_2924 hypothetical protein
YP_002479622.1	TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; KEGG: dvl:Dvul_1244 hydrogenase expression/formation protein
YP_002479623.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: dvl:Dvul_1245 nickel-dependent hydrogenase, large subunit
YP_002479624.1	KEGG: dvl:Dvul_1246 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_002479625.1	KEGG: cbt:CLH_0332 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_002479626.1	PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: dvu:DVU2655 D-alanyl-D-alanine carboxypeptidase family protein
YP_002479627.1	PFAM: protein of unknown function UPF0118; KEGG: lip:LI0472 permease
YP_002479628.1	PFAM: glycosyl transferase family 2; KEGG: met:M446_0315 glycosyl transferase family protein
YP_002479629.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_002479630.1	KEGG: dvl:Dvul_1685 hypothetical protein
YP_002479631.1	PFAM: surface antigen msp4 family protein; KEGG: seh:SeHA_C4728 heat resistant agglutinin 1
YP_002479633.1	KEGG: dvl:Dvul_2180 short-chain dehydrogenase/reductase SDR
YP_002479635.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_002479636.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_002479638.1	PFAM: GrpE protein; KEGG: dvl:Dvul_2165 GrpE protein
YP_002479639.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mgm:Mmc1_3072 response regulator receiver modulated metal dependent phosphohydrolase
YP_002479640.1	PFAM: protein of unknown function DUF330; KEGG: sfu:Sfum_2417 protein of unknown function DUF330
YP_002479641.1	PFAM: Mammalian cell entry related domain protein; KEGG: gur:Gura_2635 hypothetical protein
YP_002479642.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2415 ABC transporter related
YP_002479643.1	PFAM: protein of unknown function DUF140; KEGG: lip:LI1047 ABC-type transport system involved in resistance to organic solvents, permease component
YP_002479644.1	KEGG: lip:LI0102 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2
YP_002479646.1	KEGG: dvl:Dvul_0727 hypothetical protein
YP_002479647.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_002479648.1	forms a direct contact with the tRNA during translation
YP_002479649.1	PFAM: protein of unknown function DUF181; KEGG: dvl:Dvul_1835 hypothetical protein
YP_002479650.1	PFAM: Extracellular ligand-binding receptor; KEGG: lip:LI0496 branched chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_002479651.1	PFAM: inner-membrane translocator; KEGG: lip:LI0497 branched chain amino acid ABC transporter, permease protein
YP_002479652.1	PFAM: inner-membrane translocator; KEGG: lip:LI0498 branched chain amino acid ABC transporter, permease protein
YP_002479653.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lip:LI0499 branched chain amino acid ABC transporter, ATP-binding protein
YP_002479654.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lip:LI0500 branched chain amino acid ABC transporter, ATP-binding protein
YP_002479655.1	PFAM: peptidase M16 domain protein; KEGG: dvl:Dvul_1646 peptidase M16 domain-containing protein
YP_002479657.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: ENSAPMG00000014641; . ; K04068 anaerobic ribonucleoside-triphosphate reductase activating protein
YP_002479658.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pca:Pcar_0508 hemerythrin
YP_002479659.1	TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dvu:DVU0664 cysteine desulfurase
YP_002479660.1	TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: dvl:Dvul_2295 Fe-S cluster assembly protein NifU
YP_002479661.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ttj:TTHA0455 rrf2 family protein, transcriptional regulator
YP_002479662.1	PFAM: homoserine O-succinyltransferase; KEGG: afl:Aflv_1464 homoserine O-succinyltransferase
YP_002479663.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0703 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002479664.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hmo:HM1_1613 phosphoglycolate phosphatase, putative
YP_002479665.1	PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: dvl:Dvul_1899 ornithine carbamoyltransferase
YP_002479667.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: xau:Xaut_1874 ExsB protein
YP_002479668.1	PFAM: nuclease (SNase domain protein); KEGG: dvl:Dvul_1371 nuclease
YP_002479669.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: dvl:Dvul_1370 RpoD family RNA polymerase sigma factor
YP_002479670.1	KEGG: dvl:Dvul_1369 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein
YP_002479671.1	PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; KEGG: dvu:DVU1790 MutS2 family protein
YP_002479672.1	KEGG: dvl:Dvul_1367 GatB/YqeY domain-containing protein
YP_002479673.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_002479674.1	PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_1364 histone family protein DNA-binding protein
YP_002479675.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_002479676.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002479677.1	KEGG: dvl:Dvul_1360 hypothetical protein
YP_002479678.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_002479679.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_002479680.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: dvl:Dvul_2806 carbamoyl-phosphate synthase, large subunit
YP_002479681.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_002479682.1	KEGG: lip:LI0267 hypothetical protein
YP_002479683.1	KEGG: rme:Rmet_3472 hypothetical protein
YP_002479684.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: drm:Dred_2228 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002479685.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_0730 metal dependent phosphohydrolase
YP_002479686.1	KEGG: dvl:Dvul_0731 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_002479687.1	TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: dvl:Dvul_0732 cell division protein MraZ
YP_002479688.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: dvl:Dvul_0733 S-adenosyl-methyltransferase MraW
YP_002479689.1	KEGG: dvl:Dvul_0734 hypothetical protein
YP_002479690.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: dvu:DVU2510 penicillin-binding protein
YP_002479691.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dvu:DVU2509 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
YP_002479692.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dvl:Dvul_0737 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_002479693.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_002479694.1	TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dvl:Dvul_0739 UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_002479695.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: dvl:Dvul_0740 cell division protein FtsW
YP_002479696.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_002479697.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_002479698.1	KEGG: dvu:DVU2502 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein
YP_002479699.1	PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: dvl:Dvul_0744 polypeptide-transport-associated domain-containing protein
YP_002479700.1	PFAM: cell division protein FtsA; KEGG: dvl:Dvul_0745 cell division protein FtsA
YP_002479701.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_002479702.1	TIGRFAM: diaminopimelate dehydrogenase; KEGG: sth:STH1425 diaminopimelate dehydrogenase
YP_002479703.1	PFAM: amino acid-binding ACT domain protein; KEGG: dvl:Dvul_1522 amino acid-binding ACT domain-containing protein
YP_002479704.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dvl:Dvul_1701 twin arginine-targeting protein translocase
YP_002479705.1	KEGG: plt:Plut_0676 VCBS; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; SMART: Cadherin
YP_002479707.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: ppw:PputW619_2862 CrcB protein
YP_002479708.1	KEGG: rfr:Rfer_1947 hypothetical protein
YP_002479709.1	KEGG: lip:LI0254 hypothetical protein
YP_002479710.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_1705 dTDP-4-dehydrorhamnose reductase
YP_002479711.1	PFAM: anaerobic cobalt chelatase; KEGG: dvu:DVU1365 heme-binding protein, putative
YP_002479713.1	TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: dvl:Dvul_0945 6-phosphogluconolactonase
YP_002479714.1	KEGG: dvl:Dvul_1682 hypothetical protein
YP_002479715.1	KEGG: dvl:Dvul_0026 methyltransferase type 11
YP_002479716.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: drm:Dred_0614 putative endoribonuclease L-PSP
YP_002479717.1	TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: dvu:DVU3297 tryptophan-specific transport protein
YP_002479718.1	PFAM: Bile acid:sodium symporter; KEGG: bcl:ABC1222 sodium:bile acid symporter
YP_002479719.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_002479720.1	KEGG: lip:LI0629 hypothetical protein
YP_002479721.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cdf:CD3605 putative phosphatase
YP_002479722.1	KEGG: dvl:Dvul_2450 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002479723.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_002479724.1	PFAM: protein of unknown function UPF0079; KEGG: dvl:Dvul_1252 hypothetical protein
YP_002479725.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: lip:LI0750 hypothetical protein
YP_002479726.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_002479727.1	KEGG: dvl:Dvul_1257 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_002479728.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pvi:Cvib_1342 NifA subfamily transcriptional regulator
YP_002479729.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: dvu:DVU1231 ammonium transporter
YP_002479730.1	PFAM: nitrogen regulatory protein P-II; KEGG: dar:Daro_1291 nitrogen regulatory protein P-II
YP_002479731.1	PFAM: glutamine synthetase catalytic region; KEGG: tte:TTE0821 glutamine synthase
YP_002479732.1	PFAM: diaminopimelate epimerase; KEGG: cth:Cthe_3100 diaminopimelate epimerase
YP_002479733.1	PFAM: aminotransferase class I and II; KEGG: emi:Emin_1014 aminotransferase class I and II
YP_002479734.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_002479735.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: dvl:Dvul_1975 hypothetical protein
YP_002479736.1	KEGG: dvl:Dvul_1974 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_002479737.1	KEGG: pca:Pcar_2598 putative glutamate synthase, large subunit (domain 1)
YP_002479738.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; KEGG: ppd:Ppro_2160 ferredoxin-dependent glutamate synthase
YP_002479739.1	PFAM: glutamate synthase alpha subunit domain protein; KEGG: ppd:Ppro_2159 glutamate synthase alpha subunit
YP_002479740.1	PFAM: nitroreductase; KEGG: dvl:Dvul_0809 nitroreductase
YP_002479741.1	PFAM: HhH-GPD family protein; KEGG: cbb:CLD_0120 methylated-DNA--protein-cysteine methyltransferase
YP_002479742.1	KEGG: aoe:Clos_0936 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_002479743.1	PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; KEGG: cbb:CLD_0121 methylphosphotriester-DNA alkyltransferase
YP_002479744.1	PFAM: regulatory protein GntR HTH; KEGG: dvl:Dvul_0077 GntR family transcriptional regulator
YP_002479745.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dvl:Dvul_0078 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_002479746.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: dps:DP0971 hypothetical protein
YP_002479747.1	PFAM: protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; Domain of unknown function DUF1858; KEGG: dvl:Dvul_0658 hemerythrin HHE cation binding domain-containing protein
YP_002479749.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: dvl:Dvul_1399 phospholipid/glycerol acyltransferase
YP_002479750.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dvl:Dvul_1401 recombination factor protein RarA
YP_002479751.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_002479752.1	KEGG: dvl:Dvul_1404 hypothetical protein
YP_002479753.1	PFAM: GAF domain protein; KEGG: dvl:Dvul_1405 putative GAF sensor protein
YP_002479754.1	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: dvl:Dvul_1406 cell shape determining protein MreB
YP_002479755.1	PFAM: inositol monophosphatase; KEGG: dvu:DVU1680 inositol-1-monophosphatase
YP_002479756.1	KEGG: dvl:Dvul_1408 NUDIX hydrolase
YP_002479757.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: dvl:Dvul_1409 ribosomal-protein-alanine acetyltransferase
YP_002479758.1	PFAM: triosephosphate isomerase; KEGG: dvl:Dvul_1410 triose-phosphate isomerase
YP_002479759.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: dvl:Dvul_1411 preprotein translocase subunit SecG
YP_002479760.1	PFAM: Smr protein/MutS2; KEGG: dvu:DVU2331 Smr family protein
YP_002479762.1	KEGG: dvl:Dvul_0033 hypothetical protein
YP_002479763.1	This protein performs the mismatch recognition step during the DNA repair process
YP_002479764.1	KEGG: dvl:Dvul_1435 hypothetical protein
YP_002479765.1	PFAM: histidine triad (HIT) protein; KEGG: dvl:Dvul_1434 histidine triad (HIT) protein
YP_002479766.1	PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase DHHA1; KEGG: dvl:Dvul_1433 polynucleotide adenylyltransferase region
YP_002479767.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dvl:Dvul_1432 tyrosine recombinase XerD
YP_002479768.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: lip:LI0240 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
YP_002479769.1	KEGG: dvl:Dvul_1429 TRASH domain-containing protein
YP_002479770.1	TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA protein activase; KEGG: cth:Cthe_1329 putative CoA-substrate-specific enzyme activase
YP_002479771.1	PFAM: Peptidase M23; KEGG: dvu:DVU1851 M24/M37 family peptidase
YP_002479772.1	KEGG: dvu:DVU1849 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_002479773.1	PFAM: Mrp protein; KEGG: dvl:Dvul_1315 hypothetical protein
YP_002479774.1	TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dvl:Dvul_1316 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_002479775.1	KEGG: dvl:Dvul_1317 hypothetical protein
YP_002479776.1	PFAM: Septum formation initiator; KEGG: dvl:Dvul_1318 septum formation initiator
YP_002479777.1	KEGG: dvl:Dvul_1319 hypothetical protein
YP_002479778.1	KEGG: dvl:Dvul_1320 putative lipoprotein
YP_002479779.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_002479780.1	KEGG: dvl:Dvul_1322 metalloendopeptidase glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease
YP_002479781.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: dvl:Dvul_1323 thioredoxin
YP_002479782.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1324 thioredoxin reductase
YP_002479783.1	TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: dvl:Dvul_1325 putative lipoprotein
YP_002479784.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: dvl:Dvul_1379 cation diffusion facilitator family transporter
YP_002479785.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_002479786.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_002479787.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: dvl:Dvul_1420 cell division FtsK/SpoIIIE
YP_002479788.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: dvl:Dvul_1419 outer membrane lipoprotein carrier protein LolA
YP_002479789.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_002479790.1	KEGG: dvl:Dvul_1611 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_002479791.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_002479792.1	KEGG: sbm:Shew185_1701 hypothetical protein
YP_002479793.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dvu:DVU1669 ribosomal large subunit pseudouridine synthase B
YP_002479794.1	KEGG: dvl:Dvul_0781 hypothetical protein
YP_002479795.1	KEGG: dvl:Dvul_0780 hypothetical protein
YP_002479796.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0779 binding-protein-dependent transport systems inner membrane component
YP_002479797.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lip:LI0250 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
YP_002479798.1	PFAM: SMC domain protein; KEGG: dvl:Dvul_0777 SMC domain-containing protein
YP_002479799.1	KEGG: aha:AHA_1235 hypothetical protein
YP_002479801.1	KEGG: smt:Smal_3776 hypothetical protein
YP_002479803.1	PFAM: plasmid recombination protein; KEGG: npu:Npun_R3345 plasmid recombination enzyme
YP_002479804.1	KEGG: oan:Oant_0679 hypothetical protein
YP_002479805.1	PFAM: helix-turn-helix domain protein; KEGG: mxa:MXAN_5872 DNA-binding protein
YP_002479806.1	PFAM: protein of unknown function DUF927; KEGG: esa:ESA_03018 hypothetical protein
YP_002479807.1	PFAM: regulatory protein MerR
YP_002479808.1	PFAM: Prophage CP4-57 regulatory; KEGG: dar:Daro_2566 prophage CP4-57 regulatory
YP_002479810.1	PFAM: integrase family protein; KEGG: dvu:DVU1527 phage integrase family site specific recombinase
YP_002479811.1	KEGG: dvl:Dvul_1308 hypothetical protein
YP_002479812.1	KEGG: dvl:Dvul_1711 methyltransferase type 11
YP_002479813.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvl:Dvul_1712 metal dependent phosphohydrolase
YP_002479814.1	KEGG: dvl:Dvul_1715 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_002479816.1	KEGG: sfu:Sfum_2254 teichoic acid biosynthesis related protein
YP_002479817.1	KEGG: lip:LI0584 hypothetical protein
YP_002479818.1	KEGG: dvl:Dvul_0523 cytochrome c family protein
YP_002479819.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: dvl:Dvul_0522 electron transport complex protein RnfC, putative
YP_002479820.1	PFAM: NQR2 and RnfD family protein; KEGG: dvl:Dvul_0521 electron transport complex, RnfABCDGE type, D subunit
YP_002479821.1	PFAM: FMN-binding domain protein; KEGG: dvl:Dvul_0520 FMN-binding domain-containing protein
YP_002479822.1	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase
YP_002479823.1	TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: dvl:Dvul_0518 electron transport complex, RnfABCDGE type, A subunit
YP_002479824.1	involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate
YP_002479825.1	PFAM: ApbE family lipoprotein; KEGG: dvu:DVU2798 ApbE family protein
YP_002479826.1	PFAM: metallophosphoesterase; KEGG: lip:LI0585 DNA repair exonuclease
YP_002479827.1	KEGG: lip:LI0586 hypothetical protein
YP_002479829.1	KEGG: dvu:DVU0799 hypothetical protein
YP_002479830.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bba:Bd0085 cytidine/deoxycytidylate deaminase family protein
YP_002479831.1	PFAM: protein of unknown function DUF34; KEGG: dvu:DVU1456 NIF3 family protein
YP_002479832.1	PFAM: protein of unknown function DUF164; KEGG: dvl:Dvul_1624 hypothetical protein
YP_002479833.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: dvl:Dvul_1625 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_002479834.1	PFAM: AMP-dependent synthetase and ligase; KEGG: dvl:Dvul_1626 AMP-dependent synthetase and ligase
YP_002479835.1	PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: dvl:Dvul_1627 D-tyrosyl-tRNA deacylase
YP_002479836.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dvl:Dvul_1630 anti-sigma-factor antagonist
YP_002479837.1	PFAM: protein of unknown function DUF342; KEGG: lip:LI0134 polymerase
YP_002479838.1	KEGG: dvu:DVU1447 CgeB family protein
YP_002479839.1	PFAM: glycosyl transferase family 9; KEGG: dvu:DVU1446 heptosyltransferase family protein
YP_002479840.1	PFAM: flagellar hook-length control protein; KEGG: lip:LI0568 flagellar hook-length control protein
YP_002479841.1	PFAM: flagellar hook capping protein; KEGG: dvl:Dvul_1635 flagellar hook capping protein
YP_002479842.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0566 flagellar hook protein FlgE
YP_002479843.1	PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit
YP_002479844.1	PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA
YP_002479845.1	PFAM: regulatory protein ArsR; KEGG: rru:Rru_A1450 ArsR family transcriptional regulator
YP_002479846.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: lip:LI0598 cation-transporting ATPase, P-type
YP_002479847.1	KEGG: cpy:Cphy_1511 hypothetical protein
YP_002479848.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_002479849.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_002479850.1	KEGG: dvl:Dvul_2372 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002479851.1	KEGG: dvl:Dvul_2377 hypothetical protein
YP_002479852.1	KEGG: dvl:Dvul_1879 hypothetical protein
YP_002479853.1	KEGG: dvl:Dvul_1881 hypothetical protein
YP_002479854.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_002479855.1	PFAM: protein of unknown function DUF151; KEGG: dvl:Dvul_2005 hypothetical protein
YP_002479856.1	KEGG: dvl:Dvul_2011 hypothetical protein
YP_002479857.1	PFAM: response regulator receiver; KEGG: dvl:Dvul_2012 response regulator receiver protein
YP_002479858.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ecm:EcSMS35_1534 multidrug resistance protein MdtK
YP_002479859.1	PFAM: protein of unknown function DUF191; KEGG: dvu:DVU2755 hypothetical protein
YP_002479860.1	PFAM: Radical SAM domain protein; KEGG: dvl:Dvul_0551 radical SAM domain-containing protein
YP_002479861.1	PFAM: Radical SAM domain protein; KEGG: dvu:DVU2757 radical SAM domain-containing protein
YP_002479862.1	PFAM: protein of unknown function DUF178; KEGG: dvl:Dvul_0549 hypothetical protein
YP_002479863.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002479864.1	KEGG: dvl:Dvul_1277 hypothetical protein
YP_002479865.1	PFAM: ATP-NAD/AcoX kinase; KEGG: dvl:Dvul_1276 NAD(+) kinase
YP_002479866.1	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate
YP_002479867.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dvl:Dvul_1274 FmdB family regulatory protein
YP_002479868.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_002479869.1	PFAM: peptidase S16 lon domain protein; KEGG: dvu:DVU1893 ATP-dependent protease, putative
YP_002479870.1	PFAM: regulatory protein TetR; KEGG: dvl:Dvul_1398 TetR family transcriptional regulator
YP_002479872.1	PFAM: Na+/solute symporter; KEGG: mem:Memar_1134 Na+/solute symporter
YP_002479873.1	PFAM: branched-chain amino acid transport system II carrier protein; KEGG: abu:Abu_1368 branched-chain amino acid transport system II carrier protein
YP_002479874.1	TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: pca:Pcar_0543 membrane carboxypeptidase/penicillin-binding protein PbpC
YP_002479875.1	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: lpf:lpl1630 hypothetical protein
YP_002479876.1	PFAM: protein of unknown function UPF0227; KEGG: abo:ABO_2495 hypothetical protein
YP_002479877.1	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate
YP_002479878.1	KEGG: rci:RRC450 hypothetical protein
YP_002479879.1	KEGG: dvl:Dvul_1811 hypothetical protein
YP_002479880.1	TIGRFAM: dethiobiotin synthase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: cha:CHAB381_0700 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_002479881.1	KEGG: pth:PTH_0521 biotin synthase and related enzymes; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_002479882.1	PFAM: ROSMUCR transcriptional regulator; KEGG: dvl:Dvul_0717 MucR family transcriptional regulator
YP_002479883.1	KEGG: lip:LI1049 hypothetical protein
YP_002479884.1	KEGG: lip:LI1093 outer membrane protein and related peptidoglycan-associated (LipO)proteins
YP_002479885.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_0471 sigma-54 dependent trancsriptional regulator
YP_002479886.1	KEGG: dvu:DVU1543 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases
YP_002479887.1	PFAM: alpha/beta hydrolase fold; KEGG: dvl:Dvul_1008 alpha/beta hydrolase fold
YP_002479888.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: dvl:Dvul_1007 hypothetical protein
YP_002479889.1	KEGG: dvu:DVU1567 hypothetical protein
YP_002479890.1	PFAM: 17 kDa surface antigen; KEGG: pae:PA0070 hypothetical protein
YP_002479891.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rsq:Rsph17025_4050 hypothetical protein
YP_002479892.1	KEGG: rru:Rru_A3155 hypothetical protein
YP_002479893.1	KEGG: mlo:mll9171 virulence factor SrfB-like protein
YP_002479894.1	KEGG: mlo:mll9170 virulence factor SrfC-like protein
YP_002479895.1	KEGG: ent:Ent638_4237 hypothetical protein
YP_002479896.1	KEGG: pfl:PFL_6078 PpkA-related protein
YP_002479897.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_6077 ABC transporter, ATP-binding protein
YP_002479898.1	PFAM: protein of unknown function DUF214; KEGG: pmy:Pmen_2311 hypothetical protein
YP_002479899.1	PFAM: protein of unknown function DUF323; KEGG: pap:PSPA7_0142 hypothetical protein
YP_002479900.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: Os01g0742300; hypothetical protein ; K00020 3-hydroxyisobutyrate dehydrogenase
YP_002479901.1	PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; KEGG: dol:Dole_0847 alpha amylase all-beta
YP_002479902.1	KEGG: rso:RS03668 putative hemolysin-type protein
YP_002479903.1	KEGG: afw:Anae109_2925 hypothetical protein
YP_002479904.1	KEGG: rle:RL2802 hypothetical protein
YP_002479905.1	KEGG: mxa:MXAN_5238 hypothetical protein
YP_002479907.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ppg:PputGB1_2958 GCN5-related N-acetyltransferase
YP_002479908.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP3738c hypothetical protein
YP_002479909.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: rso:RSc1804 hypothetical protein
YP_002479910.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gvi:gll0321 HlyB/MsbA family ABC transporter
YP_002479911.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gvi:gll0322 HlyB/MsbA family ABC transporter
YP_002479912.1	TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_3612 crotonyl-CoA reductase
YP_002479913.1	PFAM: Thioesterase; KEGG: hau:Haur_1885 oleoyl-(acyl-carrier-protein) hydrolase
YP_002479914.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; Non-ribosomal peptide synthetase; KR domain protein; Beta-ketoacyl synthase; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein
YP_002479915.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein
YP_002479916.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: hau:Haur_3962 beta-ketoacyl synthase
YP_002479917.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein
YP_002479918.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bte:BTH_II1830 salicyl-AMP ligase
YP_002479919.1	PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A2336 major facilitator transporter
YP_002479920.1	PFAM: ABC-2 type transporter; KEGG: pol:Bpro_3454 ABC-2
YP_002479921.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb0182 ABC-type multidrug transport system
YP_002479922.1	KEGG: rce:RC1_2056 HlyD family secretion protein
YP_002479923.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA1059 outer membrane protein, TonB-dependent receptor
YP_002479924.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bpm:BURPS1710b_3453 biopolymer ExbD/TolR family transporter
YP_002479925.1	TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: pfl:PFL_3488 salicylate biosynthesis isochorismate synthase
YP_002479926.1	TIGRFAM: chorismate mutase related enzymes; PFAM: Chorismate mutase; KEGG: bch:Bcen2424_5002 isochorismate-pyruvate lyase
YP_002479927.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: dvl:Dvul_0252 glycerol kinase
YP_002479928.1	KEGG: sfu:Sfum_0004 hypothetical protein
YP_002479929.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ppw:PputW619_3221 citrate transporter
YP_002479930.1	PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0976 hypothetical protein
YP_002479931.1	KEGG: pca:Pcar_0934 hypothetical protein
YP_002479932.1	PFAM: regulatory protein MerR; KEGG: dps:DP1820 multidrug ABC transporter
YP_002479933.1	KEGG: cbt:CLH_1372 hypothetical protein
YP_002479934.1	KEGG: dps:DP1818 hypothetical protein
YP_002479935.1	PFAM: microcompartments protein; KEGG: dps:DP1821 carbon dioxide concentrating mechanism protein (PduA related)
YP_002479936.1	KEGG: cbt:CLH_1375 aldehyde-alcohol dehydrogenase 2
YP_002479937.1	PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: cpy:Cphy_1417 formate C-acetyltransferase
YP_002479938.1	KEGG: cbk:CLL_A1454 benzylsuccinate synthase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein
YP_002479939.1	PFAM: microcompartments protein; KEGG: cpy:Cphy_1427 microcompartments protein
YP_002479940.1	TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: amt:Amet_0259 acetaldehyde dehydrogenase (acetylating)
YP_002479941.1	PFAM: microcompartments protein; KEGG: efa:EF1623 microcompartment protein
YP_002479942.1	PFAM: Propanediol utilization protein; KEGG: amt:Amet_0262 propanediol utilization protein
YP_002479943.1	TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: ctc:CTC02168 ethanolamine utilization protein EutJ
YP_002479944.1	KEGG: ctc:CTC02167 putative ethanolamine utilization protein
YP_002479945.1	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: amt:Amet_0265 ethanolamine utilization protein EutN/carboxysome structural protein CcmL
YP_002479946.1	PFAM: microcompartments protein; KEGG: dps:DP1825 propanediol utilization protein (PduT)
YP_002479947.1	KEGG: dps:DP1826 hypothetical protein
YP_002479948.1	PFAM: microcompartments protein; KEGG: efa:EF1623 microcompartment protein
YP_002479949.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: amt:Amet_0269 iron-containing alcohol dehydrogenase
YP_002479950.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cbt:CLH_1845 ethanolamine utilization Fe-S center protein eut
YP_002479951.1	PFAM: microcompartments protein; KEGG: drm:Dred_1303 microcompartments protein
YP_002479952.1	PFAM: microcompartments protein; KEGG: dps:DP1827 propanediol utilization protein (PduU)
YP_002479953.1	KEGG: drm:Dred_1291 ethanolamine utilization protein EutP
YP_002479954.1	PFAM: protein of unknown function DUF421; KEGG: btr:Btr_0801 hypothetical protein
YP_002479955.1	PFAM: Transglycosylase-associated protein; KEGG: sdy:SDY_1695 hypothetical protein
YP_002479956.1	KEGG: rfr:Rfer_1189 hypothetical protein
YP_002479957.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: lip:LI1137 chemotaxis response regulator
YP_002479958.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: dvl:Dvul_1151 heat repeat-containing PBS lyase
YP_002479959.1	PFAM: MCP methyltransferase CheR-type; KEGG: dvl:Dvul_1152 protein-glutamate O-methyltransferase
YP_002479960.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_1153 cobyrinic acid a,c-diamide synthase
YP_002479961.1	PFAM: CheW domain protein; KEGG: dvl:Dvul_1154 putative CheW protein
YP_002479962.1	PFAM: response regulator receiver; KEGG: dvl:Dvul_1155 response regulator receiver protein
YP_002479963.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: dvl:Dvul_1156 CheA signal transduction histidine kinases
YP_002479964.1	required for 70S ribosome assembly
YP_002479965.1	PFAM: Rhomboid family protein; KEGG: dvl:Dvul_1844 rhomboid family protein
YP_002479966.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dvl:Dvul_0286 rubredoxin-type Fe(Cys)4 protein
YP_002479967.1	PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: dvl:Dvul_1675 ferritin, Dps family protein
YP_002479968.1	PFAM: ferric-uptake regulator; KEGG: dvl:Dvul_0284 ferric uptake regulator family protein
YP_002479970.1	PFAM: Glucokinase; KEGG: dvu:DVU1035 glucokinase, putative
YP_002479971.1	TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: pla:Plav_1895 RfaE bifunctional protein
YP_002479972.1	PFAM: glycosyl transferase group 1; ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2233 ABC transporter related
YP_002479973.1	PFAM: protein of unknown function DUF214; KEGG: sfu:Sfum_2234 protein of unknown function DUF214
YP_002479974.1	KEGG: sfu:Sfum_2255 glycosyltransferases probably involved in cell wall biogenesis-like
YP_002479975.1	KEGG: sfu:Sfum_2228 hypothetical protein
YP_002479976.1	PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2253 glycosyl transferase, group 1
YP_002479977.1	KEGG: sfu:Sfum_2250 hypothetical protein
YP_002479978.1	KEGG: pst:PSPTO_3879 hypothetical protein
YP_002479979.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvl:Dvul_1985 hypothetical protein
YP_002479980.1	KEGG: lip:LI0105 hypothetical protein
YP_002479981.1	KEGG: dvu:DVU0897 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002479982.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: dvl:Dvul_1994 PfpI family intracellular peptidase
YP_002479983.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dvl:Dvul_1995 FmdB family regulatory protein
YP_002479984.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: dvl:Dvul_2086 hypothetical protein
YP_002479985.1	PFAM: protein of unknown function DUF370; KEGG: dvl:Dvul_2085 hypothetical protein
YP_002479986.1	KEGG: lip:LI0310 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region
YP_002479987.1	KEGG: dvl:Dvul_2083 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_002479988.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_2082 TPR repeat-containing protein
YP_002479989.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: dvl:Dvul_2080 single-stranded-DNA-specific exonuclease RecJ
YP_002479990.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cdf:CD2887 putative signaling protein
YP_002479991.1	PFAM: cyclic nucleotide-binding; KEGG: dsy:DSY3652 hypothetical protein
YP_002479992.1	KEGG: drm:Dred_0607 hypothetical protein
YP_002479993.1	KEGG: lip:LI0461 hypothetical protein
YP_002479994.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0285 major facilitator superfamily sugar transporter
YP_002479995.1	KEGG: drm:Dred_0606 hypothetical protein
YP_002479996.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: dvl:Dvul_1653 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002479997.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: esa:ESA_00425 glycine cleavage system protein H
YP_002479998.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_002479999.1	KEGG: dvl:Dvul_1426 hypothetical protein
YP_002480000.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_002480001.1	PFAM: PSP1 domain protein; KEGG: dvl:Dvul_1170 PSP1 domain-containing protein
YP_002480002.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvl:Dvul_1169 metal dependent phosphohydrolase
YP_002480003.1	catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate
YP_002480004.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_002480005.1	KEGG: dvu:DVU1608 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
YP_002480006.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_002480007.1	KEGG: dvl:Dvul_1530 hypothetical protein
YP_002480008.1	KEGG: dvl:Dvul_1531 leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_002480009.1	KEGG: dvl:Dvul_1532 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; ATP-dependent Clp protease ATP-binding subunit clpA; SMART: AAA ATPase
YP_002480010.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: lip:LI0617 hypothetical protein
YP_002480011.1	PFAM: adenylate cyclase; KEGG: dvl:Dvul_1534 adenylate cyclase
YP_002480012.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_002480013.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: azo:azo2604 hypothetical protein
YP_002480014.1	KEGG: dvu:DVU2827 sigma-54 dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_002480015.1	KEGG: dvl:Dvul_0490 glycyl-radical activating family protein; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein
YP_002480016.1	PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: dvl:Dvul_0491 formate C-acetyltransferase
YP_002480017.1	PFAM: amidohydrolase 2; KEGG: dvu:DVU2820 amidohydrolase family protein
YP_002480018.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_C6090 major facilitator transporter
YP_002480019.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: dvl:Dvul_1544 zinc finger-domain-containing protein
YP_002480020.1	KEGG: dvl:Dvul_1545 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_002480021.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aba:Acid345_1843 thioredoxin-like
YP_002480022.1	PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: dvl:Dvul_1548 homocysteine S-methyltransferase
YP_002480023.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: dvl:Dvul_1549 sigma-70 region 2 domain-containing protein
YP_002480024.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_1550 TPR repeat-containing protein
YP_002480025.1	KEGG: dvu:DVU1582 hypothetical protein
YP_002480026.1	KEGG: dvl:Dvul_1553 RpiB/LacA/LacB family sugar-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase
YP_002480027.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_002480028.1	PFAM: TPR repeat-containing protein; peptidase M48 Ste24p; SMART: Tetratricopeptide domain protein; KEGG: dvu:DVU1578 TPR domain-containing protein
YP_002480029.1	heat shock protein involved in degradation of misfolded proteins
YP_002480030.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_002480031.1	KEGG: dvl:Dvul_1558 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_002480032.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_002480033.1	PFAM: alpha/beta hydrolase fold; KEGG: nca:Noca_1054 alpha/beta hydrolase fold
YP_002480034.1	PFAM: peptidyl-tRNA hydrolase; KEGG: dvl:Dvul_1560 peptidyl-tRNA hydrolase
YP_002480035.1	PFAM: transcription factor CarD; KEGG: dvl:Dvul_1561 CarD family transcriptional regulator
YP_002480036.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_002480037.1	PFAM: cytochrome c class I; KEGG: pha:PSHAa0285 cytochrome c4
YP_002480038.1	PFAM: Endonuclease I; KEGG: lip:LI0181 endonuclease I
YP_002480039.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvl:Dvul_0282 MotA/TolQ/ExbB proton channel
YP_002480040.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvl:Dvul_0281 biopolymer transport protein ExbD/TolR
YP_002480041.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: spe:Spro_2682 transport protein TonB
YP_002480043.1	KEGG: bpl:BURPS1106A_2083 putative outer membrane protein
YP_002480044.1	KEGG: dvl:Dvul_0905 hypothetical protein
YP_002480045.1	KEGG: mhu:Mhun_0339 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_002480046.1	TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: tpd:Teth39_1192 competence damage-inducible protein A
YP_002480048.1	KEGG: cbe:Cbei_0766 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_002480050.1	KEGG: dol:Dole_2023 hypothetical protein
YP_002480051.1	catalyzes the ATP-dependent transport of cobalt
YP_002480052.1	KEGG: dvl:Dvul_1922 hypothetical protein
YP_002480053.1	TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter, inner membrane subunit CbiQ
YP_002480054.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1938 ABC transporter related
YP_002480055.1	KEGG: met:M446_2203 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002480056.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dvu:DVU3191 ribosomal large subunit pseudouridine synthase C
YP_002480057.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_002480058.1	PFAM: Extracellular ligand-binding receptor; KEGG: dvl:Dvul_2397 extracellular ligand-binding receptor
YP_002480059.1	PFAM: inner-membrane translocator; KEGG: dvl:Dvul_2396 inner-membrane translocator
YP_002480060.1	PFAM: inner-membrane translocator; KEGG: dvu:DVU0549 high-affinity branched-chain amino acid ABC transporter, permease protein
YP_002480061.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2394 ABC transporter related
YP_002480062.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2393 ABC transporter related
YP_002480063.1	PFAM: Domain of unknown function DUF1848; KEGG: cpc:Cpar_0387 domain of unknown function DUF1848
YP_002480065.1	TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: dvl:Dvul_1716 putative 6-pyruvoyl tetrahydropterin synthase
YP_002480066.1	KEGG: dvl:Dvul_0466 hypothetical protein
YP_002480067.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pca:Pcar_0173 multimeric flavodoxin WrbA
YP_002480069.1	PFAM: Ion transport 2 domain protein; KEGG: amr:AM1_0155 ion transport protein, putative
YP_002480070.1	PFAM: ABC-2 type transporter; KEGG: hne:HNE_1536 ABC transporter, permease protein
YP_002480071.1	PFAM: ABC-2 type transporter; KEGG: smd:Smed_4696 ABC-2 type transporter
YP_002480072.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2369 ABC transporter related
YP_002480073.1	PFAM: secretion protein HlyD family protein; KEGG: smd:Smed_4698 hypothetical protein
YP_002480074.1	PFAM: Catalase domain protein; KEGG: dvl:Dvul_3018 catalase
YP_002480075.1	PFAM: Sporulation domain protein; KEGG: dvl:Dvul_1815 sporulation domain-containing protein
YP_002480077.1	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: dvl:Dvul_0929 hydrogenase accessory protein HypB
YP_002480078.1	PFAM: hydrogenase expression/synthesis HypA; KEGG: dvl:Dvul_0930 hydrogenase expression/synthesis, HypA
YP_002480079.1	KEGG: lip:LI0247 hypothetical protein
YP_002480080.1	KEGG: dvl:Dvul_0932 hypothetical protein
YP_002480081.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: dvu:DVU1768 GTP-binding protein
YP_002480082.1	PFAM: iron hydrogenase small subunit; KEGG: dvl:Dvul_1385 ferredoxin hydrogenase
YP_002480083.1	KEGG: dvl:Dvul_1386 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein
YP_002480084.1	catalyzes the formation of biotin from dethiobiotin and sulfur
YP_002480085.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain
YP_002480087.1	PFAM: sodium:dicarboxylate symporter; KEGG: ypb:YPTS_4048 sodium:dicarboxylate symporter
YP_002480088.1	PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: swo:Swol_1664 formylmethanofuran dehydrogenase, subunit E region
YP_002480089.1	PFAM: protein of unknown function DUF364; KEGG: swo:Swol_1665 protein of unknown function DUF364
YP_002480090.1	KEGG: amt:Amet_1511 cyclopropane-fatty-acyl-phospholipid synthase
YP_002480091.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cpr:CPR_1917 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein
YP_002480092.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: ppd:Ppro_1537 TonB family protein
YP_002480093.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3704 ABC transporter related
YP_002480094.1	PFAM: transport system permease protein; KEGG: nha:Nham_0954 transport system permease protein
YP_002480095.1	PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein
YP_002480096.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sat:SYN_01048 iron(III) dicitrate transport protein
YP_002480097.1	PFAM: UspA domain protein; KEGG: dvu:DVU0423 universal stress protein
YP_002480098.1	KEGG: dvl:Dvul_0905 hypothetical protein
YP_002480099.1	anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate
YP_002480100.1	sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters
YP_002480101.1	TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: drm:Dred_2844 FAD dependent oxidoreductase
YP_002480102.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dvl:Dvul_1227 HAD family hydrolase
YP_002480103.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gka:GK1972 transporter
YP_002480104.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bpa:BPP2118 ABC transporter
YP_002480105.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein)
YP_002480107.1	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mmq:MmarC5_1523 citrate transporter
YP_002480108.1	KEGG: cha:CHAB381_0023 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region
YP_002480109.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: wsu:WS1767 fumarate hydratase B, beta subunit
YP_002480110.1	PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sfu:Sfum_2000 fumarate reductase respiratory complex, transmembrane subunit
YP_002480111.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_002480112.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_002480113.1	PFAM: CBS domain containing protein; KEGG: dvl:Dvul_0535 CBS domain-containing protein
YP_002480114.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: dsy:DSY1923 hypothetical protein
YP_002480115.1	KEGG: bsu:BSU31520 sensory histidine kinase DcuS
YP_002480116.1	KEGG: dvu:DVU2083 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_002480118.1	PFAM: extracellular solute-binding protein family 5; KEGG: dvl:Dvul_1145 extracellular solute-binding protein
YP_002480119.1	KEGG: dvl:Dvul_1144 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases
YP_002480120.1	PFAM: ABC transporter related; ABC transporter, conserved site; SMART: AAA ATPase; KEGG: cno:NT01CX_0186 ABC transporter, ATP-binding protein
YP_002480121.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckl:CKL_0666 ABC transporter permease
YP_002480122.1	PFAM: NLPA lipoprotein; KEGG: cno:NT01CX_0184 NlpA family lipoprotein
YP_002480123.1	PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mta:Moth_2314 respiratory-chain NADH dehydrogenase, 51 kDa subunit
YP_002480124.1	PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: dol:Dole_0845 molybdopterin oxidoreductase Fe4s4 region
YP_002480125.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sfu:Sfum_3509 formate dehydrogenase, alpha subunit
YP_002480126.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: dvl:Dvul_2725 D-lactate dehydrogenase (cytochrome)
YP_002480127.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_002480128.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_002480129.1	PFAM: UV-endonuclease UvdE; KEGG: amt:Amet_0131 putative UV damage endonuclease
YP_002480130.1	PFAM: regulatory protein TetR; KEGG: smt:Smal_3546 transcriptional regulator, TetR family
YP_002480131.1	PFAM: PEP-utilizing protein; pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvl:Dvul_1329 PEP-utilising enzyme, mobile region
YP_002480132.1	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate
YP_002480133.1	TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: dvl:Dvul_1327 biotin--acetyl-CoA-carboxylase ligase
YP_002480134.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: dvu:DVU1836 tRNA nucleotidyltransferase, putative
YP_002480135.1	PFAM: protein of unknown function UPF0054; KEGG: dvl:Dvul_1281 hypothetical protein
YP_002480136.1	KEGG: dvl:Dvul_1282 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002480137.1	PFAM: PhoH family protein; KEGG: dvl:Dvul_1283 PhoH family protein
YP_002480138.1	KEGG: lip:LI0899 hypothetical protein
YP_002480139.1	PFAM: extracellular solute-binding protein family 3; KEGG: pmr:PMI0437 glutamate/aspartate ABC transporter, substrate-binding protein
YP_002480140.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmr:PMI0436 glutamate/aspartate ABC transporter, permease protein
YP_002480141.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stm:STM0663 glutamate/aspartate transporter
YP_002480142.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: esa:ESA_02684 hypothetical protein
YP_002480143.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: amt:Amet_0678 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_002480144.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvu:DVU3214 phosphoenolpyruvate synthase-related protein
YP_002480145.1	PFAM: response regulator receiver; KEGG: dvl:Dvul_0173 response regulator receiver protein
YP_002480146.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0172 integral membrane sensor signal transduction histidine kinase
YP_002480147.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvl:Dvul_0151 pyruvate, water dikinase
YP_002480148.1	KEGG: dvl:Dvul_2671 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; ATPase FliI/YscN; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase
YP_002480149.1	KEGG: dvl:Dvul_2670 flagellar assembly protein FliH, putative
YP_002480150.1	PFAM: flagellar motor switch protein FliG; KEGG: dvu:DVU0312 flagellar motor switch protein FliG
YP_002480151.1	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: lip:LI0857 flagellar biosynthesis/type III secretory pathway lipoprotein
YP_002480152.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: dvl:Dvul_2667 flagellar hook-basal body complex subunit FliE
YP_002480153.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: lip:LI0859 flagellar basal body rod protein
YP_002480154.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod
YP_002480155.1	SMART: ParB domain protein nuclease; KEGG: ppr:PBPRA1349 hypothetical protein
YP_002480157.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: ppr:PBPRA1348 hypothetical protein
YP_002480158.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_2346 methyl-accepting chemotaxis sensory transducer
YP_002480160.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: amr:AM1_2401 exonuclease
YP_002480161.1	KEGG: dol:Dole_1637 hypothetical protein
YP_002480162.1	PFAM: nuclease (SNase domain protein); KEGG: dvu:DVU1481 nuclease domain-containing protein
YP_002480163.1	TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: dvl:Dvul_0675 ferrous iron transport protein B
YP_002480164.1	KEGG: dvl:Dvul_2677 hypothetical protein
YP_002480165.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_002480166.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_002480167.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: amu:Amuc_1534 phosphoribosylanthranilate isomerase
YP_002480168.1	PFAM: Indole-3-glycerol phosphate synthase; KEGG: amu:Amuc_1533 indole-3-glycerol-phosphate synthase
YP_002480169.1	TIGRFAM: anthranilate phosphoribosyltransferase; glutamine amidotransferase of anthranilate synthase; PFAM: glycosyl transferase family 3; glutamine amidotransferase class-I; Glycosyl transferase, family 3-like; KEGG: amu:Amuc_1532 anthranilate phosphoribosyltransferase
YP_002480170.1	PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: dvu:DVU0465 anthranilate synthase, component I
YP_002480171.1	PFAM: glutamine synthetase catalytic region; KEGG: dvl:Dvul_1805 glutamine synthetase, catalytic region
YP_002480172.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dvl:Dvul_0677 peptidylprolyl isomerase, FKBP-type
YP_002480173.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dvu:DVU2566 diaminopimelate decarboxylase
YP_002480174.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dvu:DVU2555 MATE efflux family protein
YP_002480175.1	KEGG: dvu:DVU2554 hypothetical protein
YP_002480176.1	PFAM: protein of unknown function UPF0060; KEGG: spe:Spro_2289 hypothetical protein
YP_002480177.1	PFAM: NLP/P60 protein; KEGG: dvl:Dvul_2088 NLP/P60 protein
YP_002480178.1	TIGRFAM: dephospho-CoA kinase; pseudouridine synthase, RluA family; PFAM: Dephospho-CoA kinase; RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dvl:Dvul_1969 RluA family pseudouridine synthase
YP_002480179.1	KEGG: mgm:Mmc1_2222 PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: GAF domain protein
YP_002480180.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: dsy:DSY4980 hypothetical protein
YP_002480182.1	KEGG: bcy:Bcer98_3040 molecular chaperone DnaK
YP_002480183.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein
YP_002480184.1	KEGG: hypothetical protein
YP_002480185.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: tcx:Tcr_1103 excinuclease ABC subunit C
YP_002480186.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pca:Pcar_0784 amino acid efflux/transport protein
YP_002480187.1	PFAM: protein of unknown function DUF177; KEGG: dvl:Dvul_1847 hypothetical protein
YP_002480188.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_002480189.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_002480190.1	KEGG: dvl:Dvul_1850 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_002480191.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dvu:DVU1206 3-oxoacyl-(acyl-carrier-protein) reductase
YP_002480192.1	carries the fatty acid chain in fatty acid biosynthesis
YP_002480193.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: dvl:Dvul_1853 beta-ketoacyl synthase
YP_002480194.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_002480195.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dvl:Dvul_1855 CMP/dCMP deaminase, zinc-binding
YP_002480196.1	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: dvl:Dvul_1856 riboflavin biosynthesis protein RibD
YP_002480197.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_002480198.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_002480199.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: dvl:Dvul_1860 NusB antitermination factor
YP_002480200.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_002480201.1	PFAM: DNA polymerase III delta; KEGG: dvl:Dvul_1863 DNA polymerase III, delta
YP_002480202.1	PFAM: DNA repair protein RadC; KEGG: dvl:Dvul_1864 DNA repair protein RadC
YP_002480203.1	KEGG: dvu:DVU1191 ATP-dependent protease La, putative; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002480204.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: dvu:DVU2916 HemK protein
YP_002480205.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002480206.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_002480207.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_002480208.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: dvl:Dvul_0444 NusG antitermination factor
YP_002480209.1	binds directly to 23S ribosomal RNA
YP_002480210.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_002480211.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_002480212.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_002480213.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_002480214.1	KEGG: dvl:Dvul_0438 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein
YP_002480215.1	KEGG: dvl:Dvul_2821 hypothetical protein
YP_002480217.1	KEGG: dvl:Dvul_2819 putative lipoprotein
YP_002480218.1	PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2818 hypothetical protein
YP_002480219.1	KEGG: dvl:Dvul_2817 hypothetical protein
YP_002480220.1	PFAM: sigma-54 factor interaction domain-containing protein; histidine kinase HAMP region domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvu:DVU0151 HAMP domain/sigma-54 interaction domain-containing protein
YP_002480221.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvl:Dvul_2815 pyruvate, water dikinase
YP_002480222.1	PFAM: major facilitator superfamily MFS_1; KEGG: sfu:Sfum_2013 major facilitator superfamily MFS_1
YP_002480223.1	SMART: Rhodanese domain protein; KEGG: rba:RB11225 hypothetical protein
YP_002480224.1	PFAM: beta-lactamase domain protein; KEGG: reh:H16_A1980 hydroxyacylglutathione hydrolase
YP_002480225.1	PFAM: membrane protein of unknown function UCP014873; KEGG: lip:LI0059 hypothetical protein
YP_002480226.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rru:Rru_A0144 NADH:flavin oxidoreductase/NADH oxidase
YP_002480227.1	KEGG: ypy:YPK_3070 hypothetical protein
YP_002480228.1	KEGG: sfu:Sfum_2049 hypothetical protein
YP_002480229.1	KEGG: pca:Pcar_0858 hypothetical protein
YP_002480230.1	KEGG: dvl:Dvul_2727 hypothetical protein
YP_002480231.1	PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2726 hypothetical protein
YP_002480232.1	KEGG: mgm:Mmc1_3622 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002480233.1	KEGG: tye:THEYE_A0920 NADH-quinone oxidoreductase chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002480234.1	KEGG: tye:THEYE_A0919 NADH-quinone oxidoreductase chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_002480235.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ret:RHE_CH03730 NADH-ubiquinone oxidoreductase chain K protein
YP_002480236.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: tye:THEYE_A1120 NADH-quinone oxidoreductase chain J
YP_002480237.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tye:THEYE_A1124 NADH-quinone oxidoreductase, chain I subfamily, putative
YP_002480238.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: tye:THEYE_A0915 NADH-quinone oxidoreductase chain H
YP_002480239.1	KEGG: tye:THEYE_A0914 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa
YP_002480240.1	TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: tye:THEYE_A1122 NADH-quinone oxidoreductase chain c 2
YP_002480241.1	KEGG: tye:THEYE_A1126 NADH-quinone oxidoreductase chain b 2; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_002480242.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gbm:Gbem_3926 NADH-ubiquinone/plastoquinone oxidoreductase chain 3
YP_002480243.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tye:THEYE_A1127 anaerobic dimethyl sulfoxide reductase chain B
YP_002480244.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvl:Dvul_2794 molybdopterin oxidoreductase
YP_002480245.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2506 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002480246.1	PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dvl:Dvul_2505 NADH dehydrogenase (ubiquinone)
YP_002480247.1	PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvl:Dvul_2504 ech hydrogenase, subunit EchD, putative
YP_002480248.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dvl:Dvul_2503 NADH ubiquinone oxidoreductase, 20 kDa subunit
YP_002480249.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dvl:Dvul_2502 respiratory-chain NADH dehydrogenase, subunit 1
YP_002480250.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_2501 NADH dehydrogenase (quinone)
YP_002480251.1	KEGG: cdf:CD2965 putative signaling protein
YP_002480252.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1929 acetyltransferase
YP_002480253.1	TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mmw:Mmwyl1_1976 ornithine carbamoyltransferase
YP_002480254.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_002480255.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cbt:CLH_0916 K+-transporting ATPase, B subunit
YP_002480256.1	PFAM: K transporting ATPase KdpC subunit; KEGG: cbt:CLH_0917 K+-transporting ATPase, C subunit
YP_002480257.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; KEGG: ckl:CKL_1469 hypothetical protein
YP_002480258.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbt:CLH_0919 KDP operon transcriptional regulatory protein KdpE
YP_002480259.1	PFAM: inositol monophosphatase; KEGG: smd:Smed_5476 histidinol-phosphate phosphatase, putative
YP_002480260.1	PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: spe:Spro_0134 regulatory protein UhpC
YP_002480261.1	PFAM: dihydrodipicolinate synthetase; KEGG: rle:RL4484 putative dihydrodipicolinate synthase
YP_002480262.1	PFAM: FAD dependent oxidoreductase; KEGG: bce:BC2836 sarcosine oxidase beta subunit
YP_002480263.1	KEGG: dps:DP2247 hypothetical protein
YP_002480264.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cti:RALTA_B1296 opine oxidase subunit A; pyridine nucleotide-disulphide oxidoreductase
YP_002480265.1	PFAM: Aldehyde Dehydrogenase; KEGG: bph:Bphy_6864 aldehyde dehydrogenase
YP_002480266.1	PFAM: proline racemase; KEGG: cdf:CD3237 putative proline racemase
YP_002480267.1	PFAM: amino acid permease-associated region; KEGG: spe:Spro_1836 amino acid permease-associated region
YP_002480268.1	KEGG: gsu:GSU1208 hypothetical protein
YP_002480269.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_002480270.1	KEGG: dvl:Dvul_0586 hypothetical protein
YP_002480271.1	KEGG: dvl:Dvul_0587 hypothetical protein
YP_002480272.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
YP_002480273.1	PFAM: glycosyl transferase family 2; KEGG: ana:alr3062 probable glycosyl transferase
YP_002480274.1	PFAM: OsmC family protein; KEGG: fjo:Fjoh_2380 OsmC family protein
YP_002480275.1	PFAM: protein of unknown function DUF204; KEGG: dvl:Dvul_0455 hypothetical protein
YP_002480279.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pap:PSPA7_5544 magnesium ABC transporter ATPase
YP_002480280.1	KEGG: dvl:Dvul_2198 hypothetical protein
YP_002480281.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pnu:Pnuc_1088 thiamine pyrophosphate binding domain-containing protein
YP_002480282.1	PFAM: Auxin Efflux Carrier; KEGG: lip:LI0107 permease
YP_002480283.1	KEGG: lip:LI0837 hypothetical protein
YP_002480284.1	KEGG: dvl:Dvul_1026 hypothetical protein
YP_002480285.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_002480286.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: dvl:Dvul_1804 membrane protein involved in aromatic hydrocarbon degradation
YP_002480287.1	KEGG: dvu:DVU1284 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_002480288.1	PFAM: Nucleotidyl transferase; KEGG: dvl:Dvul_1782 UTP-glucose-1-phosphate uridylyltransferase GalU
YP_002480289.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_002480290.1	PFAM: YbbR family protein; KEGG: dvl:Dvul_1784 YbbR family protein
YP_002480291.1	PFAM: protein of unknown function DUF147; KEGG: dvl:Dvul_1785 hypothetical protein
YP_002480292.1	KEGG: dvl:Dvul_1786 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_002480293.1	KEGG: dvl:Dvul_1787 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002480294.1	KEGG: dvu:DVU2801 hypothetical protein
YP_002480295.1	PFAM: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4447 GntR family transcriptional regulator
YP_002480297.1	KEGG: dvl:Dvul_0510 amino acid transporter, AAT family
YP_002480298.1	KEGG: sfu:Sfum_3609 metallo-beta-lactamase family protein
YP_002480299.1	PFAM: cobalamin synthesis protein P47K; KEGG: sfu:Sfum_3612 cobalamin synthesis protein, P47K
YP_002480300.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dvl:Dvul_1701 twin arginine-targeting protein translocase
YP_002480301.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dvl:Dvul_0079 DEAD/DEAH box helicase domain-containing protein
YP_002480302.1	TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cch:Cag_0412 putative molybdenum utilization protein ModD
YP_002480304.1	KEGG: bac:BamMC406_6510 hypothetical protein
YP_002480305.1	PFAM: ATPase associated with various cellular activities AAA_3; KEGG: pca:Pcar_0522 ATPase, AAA superfamily
YP_002480306.1	PFAM: GGDEF domain containing protein; TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0546 diguanylate cyclase
YP_002480307.1	PFAM: beta-lactamase domain protein; KEGG: dvl:Dvul_0544 beta-lactamase domain-containing protein
YP_002480308.1	PFAM: NADPH-dependent FMN reductase; KEGG: dvu:DVU2767 iron-sulfur flavoprotein, putative
YP_002480309.1	KEGG: dvu:DVU2768 ComF family protein
YP_002480310.1	KEGG: dvl:Dvul_0540 hypothetical protein
YP_002480311.1	PFAM: DNA polymerase beta domain protein region; KEGG: smd:Smed_5877 streptomycin 3''-adenylyltransferase
YP_002480312.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: dvl:Dvul_0538 import inner membrane translocase, subunit Tim44
YP_002480313.1	PFAM: thioesterase superfamily protein; KEGG: dvl:Dvul_2351 hypothetical protein
YP_002480314.1	PFAM: zinc finger DksA/TraR C4-type; KEGG: kpe:KPK_3736 C4-type zinc finger protein, DksA/TraR family
YP_002480315.1	KEGG: lip:LI0131 folylpolyglutamate synthase; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein
YP_002480316.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_002480317.1	catalyzes the removal of amino acids from the N termini of peptides
YP_002480318.1	KEGG: gbe:GbCGDNIH1_1303 hypothetical protein
YP_002480319.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_1485 GCN5-related N-acetyltransferase
YP_002480320.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dvl:Dvul_2305 phosphotransferase domain-containing protein
YP_002480321.1	PFAM: protein of unknown function DUF343; KEGG: dvu:DVU0656 hypothetical protein
YP_002480322.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: dvl:Dvul_2300 phosphodiesterase
YP_002480323.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_002480324.1	TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: dvl:Dvul_0401 acetate--CoA ligase
YP_002480326.1	PFAM: FeoA family protein; KEGG: dvl:Dvul_0674 FeoA family protein
YP_002480327.1	KEGG: dvl:Dvul_0061 hypothetical protein
YP_002480328.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dvl:Dvul_0060 heavy metal translocating P-type ATPase
YP_002480329.1	KEGG: dvl:Dvul_0059 hypothetical protein
YP_002480331.1	PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A3715 hypothetical protein
YP_002480332.1	KEGG: dvu:DVU0281 exopolysaccharide biosynthesis protein, putative; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_002480333.1	PFAM: extracellular solute-binding protein family 3; KEGG: dvl:Dvul_2548 extracellular solute-binding protein
YP_002480334.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2547 polar amino acid ABC transporter, inner membrane subunit
YP_002480335.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2546 ABC transporter related
YP_002480336.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2545 polar amino acid ABC transporter, inner membrane subunit
YP_002480337.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cdf:CD0522 putative signaling protein
YP_002480338.1	TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cvi:CV_3093 threonine dehydratase
YP_002480339.1	KEGG: dvl:Dvul_0475 hypothetical protein
YP_002480340.1	Inhibits transcription at high concentrations of nickel
YP_002480341.1	similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis
YP_002480342.1	PFAM: protein of unknown function DUF1078 domain protein; KEGG: dvu:DVU2893 flagellar basal-body rod protein, putative
YP_002480343.1	PFAM: NLP/P60 protein; KEGG: pol:Bpro_2667 peptidace C40 NLP/P60
YP_002480344.1	PFAM: glutamyl-tRNA synthetase class Ic; KEGG: dvl:Dvul_1396 glutamyl-tRNA synthetase, class Ic
YP_002480345.1	KEGG: dps:DP2880 hypothetical protein
YP_002480346.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sfu:Sfum_1700 molybdenum cofactor synthesis domain
YP_002480347.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sfu:Sfum_0615 molybdenum cofactor synthesis domain
YP_002480348.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sfu:Sfum_2082 UBA/ThiF-type NAD/FAD binding protein
YP_002480349.1	PFAM: thiamineS protein; KEGG: sfu:Sfum_1283 hypothetical protein
YP_002480350.1	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: sfu:Sfum_4079 aldehyde ferredoxin oxidoreductase
YP_002480351.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU0747 ABC transporter, ATP-binding protein
YP_002480352.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2224 binding-protein-dependent transport systems inner membrane component
YP_002480353.1	KEGG: dvu:DVU0745 ABC transporter, periplasmic substrate-binding protein
YP_002480355.1	PFAM: TOBE domain protein; KEGG: dvl:Dvul_2790 TOBE domain-containing protein
YP_002480356.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cbt:CLH_2710 putative transcriptional regulator
YP_002480357.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cti:RALTA_B1542 shikimate and dehydroshikimate transport protein (putative); MFS family transporter
YP_002480358.1	PFAM: metallophosphoesterase; KEGG: pst:PSPTO_0490 Ser/Thr protein phosphatase family protein
YP_002480360.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002480361.1	PFAM: helix-turn-helix domain protein; KEGG: xfa:XF1720 hypothetical protein
YP_002480362.1	KEGG: sfu:Sfum_1859 hypothetical protein
YP_002480363.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: sma:SAV_3193 phosphopantetheinyl transferase
YP_002480364.1	KEGG: dvl:Dvul_2145 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_002480365.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_002480366.1	PFAM: ribonuclease HII/HIII; KEGG: dvl:Dvul_2147 ribonuclease H
YP_002480367.1	PFAM: protein of unknown function UPF0102; KEGG: dvl:Dvul_2148 hypothetical protein
YP_002480368.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvl:Dvul_2149 uroporphyrin-III C/tetrapyrrole methyltransferase
YP_002480369.1	PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: dvl:Dvul_2150 PTS system mannose/fructose/sorbose family IID component
YP_002480370.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: dvl:Dvul_2151 phosphotransferase system, phosphocarrier protein HPr
YP_002480371.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: dvl:Dvul_2152 phosphoenolpyruvate-protein phosphotransferase
YP_002480372.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_002480373.1	PFAM: ComEC/Rec2-related protein; KEGG: dvu:DVU3257 DNA internalization-related competence protein ComEC/Rec2
YP_002480374.1	PFAM: NADPH-dependent FMN reductase; KEGG: cbe:Cbei_4970 NADPH-dependent FMN reductase
YP_002480375.1	KEGG: dvu:DVU3256 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding
YP_002480376.1	TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: dvl:Dvul_2144 16S rRNA processing protein RimM
YP_002480377.1	KEGG: dvl:Dvul_2143 hypothetical protein
YP_002480378.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_002480379.1	KEGG: dvl:Dvul_2141 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_002480380.1	KEGG: dvl:Dvul_1949 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase
YP_002480381.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_002480382.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dvl:Dvul_1951 twin-arginine translocation protein, TatB subunit
YP_002480383.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: dvl:Dvul_1952 sec-independent protein translocase, TatC subunit
YP_002480384.1	PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: dvu:DVU1040 imidazoleglycerol-phosphate dehydratase
YP_002480385.1	KEGG: dvl:Dvul_1954 putative lipoprotein
YP_002480386.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_002480387.1	PFAM: small multidrug resistance protein; KEGG: dvu:DVU3327 SMR family multidrug efflux pump
YP_002480388.1	PFAM: small multidrug resistance protein; KEGG: dvl:Dvul_0064 small multidrug resistance protein
YP_002480390.1	PFAM: Phosphoglycerate mutase; KEGG: pth:PTH_0689 fructose-2,6-bisphosphatase
YP_002480391.1	SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_1006 metal dependent phosphohydrolase
YP_002480392.1	KEGG: pca:Pcar_0226 coenzyme F390 synthetase
YP_002480393.1	PFAM: Radical SAM domain protein; KEGG: pth:PTH_0684 Fe-S oxidoreductases
YP_002480394.1	KEGG: dvl:Dvul_1578 hypothetical protein
YP_002480395.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dvl:Dvul_1577 methyltransferase type 11
YP_002480396.1	KEGG: pth:PTH_0681 hypothetical protein
YP_002480397.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dps:DP0269 Fe-S oxidoreductase
YP_002480398.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: dvl:Dvul_1574 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_002480399.1	PFAM: molybdopterin binding domain; KEGG: dvl:Dvul_1573 molybdopterin binding domain-containing protein
YP_002480400.1	KEGG: dvl:Dvul_0245 putative lipoprotein
YP_002480401.1	PFAM: polysaccharide export protein; KEGG: dvl:Dvul_0246 polysaccharide export protein
YP_002480402.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: tde:TDE0478 cyclic nucleotide binding domain-containing protein
YP_002480403.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: cpy:Cphy_1552 cupin 2 domain-containing protein
YP_002480404.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_002480405.1	KEGG: rxy:Rxyl_2427 hypothetical protein
YP_002480406.1	catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge
YP_002480407.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: lip:LI0734 hypothetical protein
YP_002480408.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_002480409.1	KEGG: dvl:Dvul_2077 hypothetical protein
YP_002480410.1	KEGG: dvu:DVU0908 iron-sulfur cluster-binding protein, putative
YP_002480411.1	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: dvl:Dvul_2074 flagellar motor switch protein FliM
YP_002480412.1	TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: gme:Gmet_0923 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase
YP_002480413.1	PFAM: protein of unknown function DUF307; KEGG: dvl:Dvul_1392 hypothetical protein
YP_002480414.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_002480415.1	KEGG: xau:Xaut_4723 SH3 type 3 domain-containing protein
YP_002480416.1	PFAM: Radical SAM domain protein; KEGG: dvl:Dvul_1670 radical SAM domain-containing protein
YP_002480417.1	PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: dvu:DVU1403 cob(I)alamin adenosyltransferase
YP_002480419.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: dvl:Dvul_2204 transport-associated
YP_002480420.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_002480421.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1203 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002480422.1	PFAM: protein of unknown function DUF1641; KEGG: dvl:Dvul_1202 hypothetical protein
YP_002480424.1	PFAM: adenylate cyclase; KEGG: cth:Cthe_2577 adenylate cyclase
YP_002480425.1	KEGG: sse:Ssed_0364 hypothetical protein
YP_002480426.1	PFAM: sodium/sulphate symporter; KEGG: sfr:Sfri_3879 sodium/sulphate symporter
YP_002480427.1	KEGG: xau:Xaut_4178 hypothetical protein
YP_002480428.1	KEGG: sse:Ssed_0371 hypothetical protein
YP_002480429.1	PFAM: Inorganic pyrophosphatase; KEGG: cpb:Cphamn1_1534 inorganic pyrophosphatase
YP_002480430.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: syn:sll0030 cmp operon transcriptional regulator, LysR family protein
YP_002480431.1	KEGG: dvu:DVU0799 hypothetical protein
YP_002480432.1	KEGG: dvu:DVU2747 hypothetical protein
YP_002480434.1	PFAM: glycerate kinase; KEGG: xac:XAC4360 glycerate kinase
YP_002480436.1	PFAM: regulatory protein TetR; KEGG: sma:SAV_1132 TetR family transcriptional regulator
YP_002480437.1	PFAM: protein of unknown function DUF134; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: chy:CHY_0236 hypothetical protein
YP_002480438.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: sfu:Sfum_3407 dinitrogenase iron-molybdenum cofactor biosynthesis
YP_002480439.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Cobyrinic acid ac-diamide synthase; KEGG: sfu:Sfum_3408 cobyrinic acid a,c-diamide synthase
YP_002480440.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_3409 cobyrinic acid a,c-diamide synthase
YP_002480441.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: sfu:Sfum_3410 dinitrogenase iron-molybdenum cofactor biosynthesis
YP_002480442.1	PFAM: protein of unknown function DUF52; KEGG: dvl:Dvul_0469 hypothetical protein
YP_002480443.1	PFAM: Aldehyde Dehydrogenase; KEGG: dac:Daci_0100 succinic semialdehyde dehydrogenase
YP_002480444.1	KEGG: dvl:Dvul_0463 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_002480445.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_002480446.1	PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_0529 hypothetical protein
YP_002480447.1	PFAM: protein of unknown function DUF161; KEGG: dvl:Dvul_0531 hypothetical protein
YP_002480448.1	PFAM: amidohydrolase; KEGG: dvu:DVU2900 amidohydrolase family protein
YP_002480449.1	PFAM: Hpt domain protein; KEGG: pmy:Pmen_0835 multi-sensor hybrid histidine kinase
YP_002480450.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dvl:Dvul_0934 heavy metal translocating P-type ATPase
YP_002480451.1	PFAM: Heavy metal transport/detoxification protein; KEGG: hmo:HM1_1698 copper ion binding protein, putative
YP_002480452.1	KEGG: dvl:Dvul_0192 putative lipoprotein
YP_002480453.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: dvl:Dvul_0226 glycerol-3-phosphate dehydrogenase (NAD(P)(+))
YP_002480454.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_0969 NADH dehydrogenase (quinone)
YP_002480455.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dvl:Dvul_0968 respiratory-chain NADH dehydrogenase, subunit 1
YP_002480456.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dvl:Dvul_0967 NADH ubiquinone oxidoreductase, 20 kDa subunit
YP_002480457.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0966 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002480458.1	PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvl:Dvul_0965 NADH dehydrogenase (ubiquinone), 30 kDa subunit
YP_002480459.1	PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dvl:Dvul_0964 NADH dehydrogenase (ubiquinone)
YP_002480460.1	PFAM: hydrogenase expression/synthesis HypA; KEGG: dvl:Dvul_0963 hydrogenase nickel insertion protein HypA
YP_002480461.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0962 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002480462.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein
YP_002480463.1	KEGG: dvl:Dvul_2636 hypothetical protein
YP_002480464.1	PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: dvl:Dvul_2635 N-acylneuraminate-9-phosphate synthase
YP_002480465.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvu:DVU0947 hypothetical protein
YP_002480466.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_002480467.1	KEGG: dvl:Dvul_0671 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_002480468.1	PFAM: SirA family protein; KEGG: dvl:Dvul_1417 hypothetical protein
YP_002480469.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; KEGG: dvl:Dvul_2798 methyl-accepting chemotaxis sensory transducer
YP_002480470.1	KEGG: dvl:Dvul_2922 TraR/DksA family transcriptional regulator
YP_002480471.1	PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: chy:CHY_2702 glutamine amidotransferase subunit PdxT
YP_002480472.1	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate
YP_002480473.1	KEGG: dvl:Dvul_1698 hypothetical protein
YP_002480474.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dvl:Dvul_1697 HAD family hydrolase
YP_002480475.1	PFAM: protein of unknown function YGGT; KEGG: dvl:Dvul_1696 protein of unknown function YGGT
YP_002480476.1	KEGG: dvl:Dvul_1693 hypothetical protein
YP_002480477.1	KEGG: dvl:Dvul_1692 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein
YP_002480478.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_002480479.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_002480480.1	KEGG: dvl:Dvul_0214 putative CheA signal transduction histidine kinases
YP_002480481.1	KEGG: dvl:Dvul_0213 hypothetical protein
YP_002480482.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dvl:Dvul_0212 ubiquinone/menaquinone biosynthesis methyltransferases
YP_002480483.1	KEGG: pla:Plav_2460 hypothetical protein
YP_002480484.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: dvl:Dvul_0210 UDP-glucose/GDP-mannose dehydrogenase
YP_002480485.1	PFAM: purine or other phosphorylase family 1; KEGG: dvl:Dvul_0209 hypothetical protein
YP_002480486.1	PFAM: Polyprenyl synthetase; KEGG: dvl:Dvul_0208 trans-hexaprenyltranstransferase
YP_002480487.1	PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dvl:Dvul_0206 phosphoribosylformylglycinamidine synthase
YP_002480488.1	KEGG: rpe:RPE_4691 hypothetical protein
YP_002480489.1	PFAM: protein of unknown function DUF111; KEGG: dvu:DVU2772 hypothetical protein
YP_002480490.1	PFAM: CBS domain containing protein; KEGG: dvl:Dvul_0535 CBS domain-containing protein
YP_002480491.1	TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: dvl:Dvul_0534 DsrC family protein
YP_002480492.1	KEGG: dvl:Dvul_2326 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_002480493.1	PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: dvu:DVU3053 hypothetical protein
YP_002480494.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: dvu:DVU0481 ADP-L-glycero-D-mannoheptose-6-epimerase
YP_002480496.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1972 ABC transporter related
YP_002480497.1	PFAM: SufBD protein; KEGG: dvl:Dvul_1973 SufBD protein
YP_002480498.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: bte:BTH_II0021 PAP2 family protein
YP_002480499.1	SMART: regulatory protein ArsR; KEGG: psa:PST_0241 arsenic resistance transcriptional regulator
YP_002480500.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dol:Dole_0762 arsenite S-adenosylmethyltransferase
YP_002480501.1	PFAM: RNP-1 like RNA-binding protein; KEGG: dvl:Dvul_0803 RNP-1 like RNA-binding protein
YP_002480502.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_002480503.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_002480504.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: dvl:Dvul_1340 preprotein translocase, YajC subunit
YP_002480505.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: dvu:DVU1825 amidohydrolase family protein
YP_002480506.1	KEGG: dvl:Dvul_1334 hypothetical protein
YP_002480507.1	catalyzes the transamination of diaminopimelate with 2-oxoglutarate to produce tetrahydrodipicolinate and glutamate
YP_002480508.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_002480509.1	KEGG: dvl:Dvul_1331 hypothetical protein
YP_002480510.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: dvl:Dvul_1330 CBS domain-containing protein
YP_002480511.1	Transfers the fatty acyl group on membrane lipoproteins
YP_002480512.1	KEGG: bpm:BURPS1710b_A1695 hypothetical protein
YP_002480513.1	KEGG: dvu:DVU1862 GGDEF domain-containing protein
YP_002480514.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_1300 flagellar synthesis regulator FleN, putative
YP_002480515.1	PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_1299 histone family protein DNA-binding protein
YP_002480516.1	KEGG: dvl:Dvul_1296 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase
YP_002480517.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: dvl:Dvul_0825 iron-containing alcohol dehydrogenase
YP_002480519.1	KEGG: dvu:DVU2747 hypothetical protein
YP_002480520.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain
YP_002480521.1	PFAM: basic membrane lipoprotein; KEGG: tte:TTE0457 surface lipoprotein
YP_002480522.1	KEGG: vei:Veis_0768 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
YP_002480523.1	this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae
YP_002480524.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cbe:Cbei_4420 UDP-glucose 4-epimerase
YP_002480525.1	TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: dvu:DVU2680 flavodoxin
YP_002480526.1	PFAM: Radical SAM domain protein; KEGG: dvl:Dvul_1667 radical SAM domain-containing protein
YP_002480527.1	KEGG: fal:FRAAL2262 hypothetical protein
YP_002480528.1	KEGG: dvl:Dvul_1664 hypothetical protein
YP_002480529.1	KEGG: dvu:DVU1415 AsmA family protein
YP_002480530.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_002480531.1	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: dvl:Dvul_0913 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
YP_002480532.1	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_002480533.1	TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: dvl:Dvul_0951 TraR/DksA family transcriptional regulator
YP_002480534.1	PFAM: phosphate transporter; KEGG: dvl:Dvul_0952 phosphate transporter
YP_002480535.1	KEGG: dvl:Dvul_0953 hypothetical protein
YP_002480536.1	PFAM: pseudouridine synthase; KEGG: dvl:Dvul_0578 pseudouridine synthase
YP_002480537.1	KEGG: dvl:Dvul_1907 protein of unknown function UPF0052 and CofD
YP_002480538.1	PFAM: 3'-5' exonuclease; KEGG: dvl:Dvul_1912 3'-5' exonuclease
YP_002480539.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_002480540.1	PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: dvl:Dvul_1916 single-stranded nucleic acid binding R3H domain-containing protein
YP_002480541.1	TIGRFAM: YidC translocase/secretase; PFAM: 60 kDa inner membrane insertion protein; KEGG: dvl:Dvul_1917 60 kDa inner membrane insertion protein
YP_002480542.1	PFAM: protein of unknown function DUF37; KEGG: dvl:Dvul_1918 hypothetical protein
YP_002480543.1	TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: sat:SYN_01012 ribonuclease P protein component
YP_002480544.1	PFAM: ribosomal protein L34; KEGG: hha:Hhal_1228 ribosomal protein L34
YP_002480545.1	KEGG: cur:cu1817 putative Fe-S oxidoreductase
YP_002480547.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_002480549.1	KEGG: dvl:Dvul_1655 hypothetical protein
YP_002480550.1	PFAM: OmpA/MotB domain protein; KEGG: lip:LI0902 outer membrane protein
YP_002480551.1	KEGG: dvl:Dvul_0561 hypothetical protein
YP_002480552.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: dvu:DVU2750 cobalamin biosynthesis protein CbiD
YP_002480553.1	TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvu:DVU2749 precorrin-6Y C5,15-methyltransferase (decarboxylating)
YP_002480554.1	KEGG: dvl:Dvul_0559 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_002480555.1	PFAM: Aldehyde Dehydrogenase; KEGG: cbe:Cbei_0729 aldehyde dehydrogenase
YP_002480557.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dvl:Dvul_0767 ferredoxin--NADP(+) reductase subunit alpha
YP_002480558.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_002480559.1	KEGG: dvu:DVU2490 histidinol phosphatase, putative; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein
YP_002480560.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU2491 ABC transporter, ATP-binding protein
YP_002480561.1	PFAM: SNARE associated Golgi protein; KEGG: dvl:Dvul_0575 DedA family protein
YP_002480562.1	KEGG: dvl:Dvul_0630 hypothetical protein
YP_002480563.1	KEGG: dvl:Dvul_0629 hypothetical protein
YP_002480564.1	KEGG: lip:LI0797 hypothetical protein
YP_002480565.1	PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_0340 hypothetical protein
YP_002480566.1	PFAM: protein of unknown function DUF162; KEGG: dvl:Dvul_0341 hypothetical protein
YP_002480567.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_0345 hypothetical protein
YP_002480568.1	PFAM: FAD linked oxidase domain protein; KEGG: dvl:Dvul_0346 FAD linked oxidase domain-containing protein
YP_002480569.1	KEGG: sequence orphan
YP_002480570.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ent:Ent638_0501 outer membrane autotransporter
YP_002480571.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: ecm:EcSMS35_2509 putative outer membrane protein
YP_002480572.1	binds to flagellin and appears to stabilize flagellin during flagella assembly
YP_002480573.1	PFAM: carbon storage regulator; KEGG: dvl:Dvul_2420 carbon storage regulator, CsrA
YP_002480574.1	TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: lip:LI0748 flagellin-like protein
YP_002480575.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0747 flagellar hook-associated protein
YP_002480576.1	PFAM: FlgN family protein; KEGG: dvl:Dvul_2423 hypothetical protein
YP_002480577.1	PFAM: flagellar protein FlgJ; KEGG: dvl:Dvul_2424 peptidase M23B
YP_002480578.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_002480579.1	PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: dvl:Dvul_2418 anti-sigma-28 factor, FlgM
YP_002480580.1	KEGG: dvl:Dvul_2417 hypothetical protein
YP_002480581.1	PFAM: major facilitator superfamily MFS_1; KEGG: dvl:Dvul_2415 major facilitator superfamily transporter
YP_002480582.1	PFAM: methylenetetrahydrofolate reductase; KEGG: dvl:Dvul_1992 5,10-methylenetetrahydrofolate reductase
YP_002480583.1	KEGG: dvu:DVU0996 hypothetical protein
YP_002480584.1	TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: dvl:Dvul_0204 desulfoferrodoxin
YP_002480585.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: emi:Emin_0014 rubredoxin-type Fe(Cys)4 protein
YP_002480586.1	PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: dvl:Dvul_0202 beta-lactamase domain-containing protein
YP_002480587.1	PFAM: cytochrome c class III; KEGG: dvl:Dvul_0215 cytochrome c, class III
YP_002480588.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvu:DVU3170 precorrin-3b C17-methyltransferase
YP_002480589.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: dvl:Dvul_0217 cobalamin (vitamin B12) biosynthesis CbiG protein
YP_002480591.1	TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: dvl:Dvul_0218 glutamate-1-semialdehyde-2,1-aminomutase
YP_002480592.1	KEGG: dvl:Dvul_0219 AsnC family transcriptional regulator
YP_002480593.1	KEGG: dvl:Dvul_0805 hypothetical protein
YP_002480594.1	PFAM: RNP-1 like RNA-binding protein; KEGG: dvl:Dvul_0803 RNP-1 like RNA-binding protein
YP_002480595.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dvu:DVU0959 replicative DNA helicase
YP_002480596.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_002480597.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_002480598.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_002480600.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_002480601.1	KEGG: cti:RALTA_B1275 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_002480602.1	KEGG: dvl:Dvul_1220 hypothetical protein
YP_002480604.1	PFAM: Spermine synthase; KEGG: dvl:Dvul_2159 hypothetical protein
YP_002480605.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dvl:Dvul_1603 CMP/dCMP deaminase, zinc-binding
YP_002480606.1	PFAM: conserved hypothetical protein; KEGG: dvl:Dvul_1602 hypothetical protein
YP_002480607.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dvl:Dvul_1601 beta-lactamase domain-containing protein
YP_002480608.1	TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: dvl:Dvul_1600 putative methyltransferase
YP_002480609.1	KEGG: dvl:Dvul_1599 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_002480610.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_002480611.1	PFAM: carbonic anhydrase; KEGG: tdn:Suden_0162 carbonate dehydratase
YP_002480612.1	PFAM: cytochrome c class III; KEGG: dvl:Dvul_2405 cytochrome c, class III
YP_002480613.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2406 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002480614.1	PFAM: Polysulphide reductase NrfD; KEGG: dvl:Dvul_2407 polysulphide reductase, NrfD
YP_002480617.1	catalyzes the formation of pyruvate from 2,3-diaminopropionate
YP_002480619.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dvl:Dvul_2645 hydrolase
YP_002480620.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_2643 hexapaptide repeat-containing transferase
YP_002480621.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_002480622.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_2641 NAD-dependent epimerase/dehydratase
YP_002480623.1	PFAM: HpcH/HpaI aldolase; KEGG: dvl:Dvul_2640 2-dehydro-3-deoxyglucarate aldolase
YP_002480624.1	PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: dvl:Dvul_0382 molybdenum cofactor synthesis domain-containing protein
YP_002480625.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: cbh:CLC_1475 alcohol dehydrogenase, iron-containing
YP_002480626.1	PFAM: TOBE domain protein; KEGG: pfl:PFL_3618 molybdenum-pterin-binding protein
YP_002480627.1	KEGG: dvu:DVU2496 putative lipoprotein
YP_002480628.1	PFAM: peptidase M48 Ste24p; KEGG: dvl:Dvul_0750 peptidase M48, Ste24p
YP_002480629.1	KEGG: hau:Haur_3584 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase
YP_002480630.1	PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2261 glycosyl transferase, group 1
YP_002480631.1	KEGG: sfu:Sfum_2250 hypothetical protein
YP_002480632.1	PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2261 glycosyl transferase, group 1
YP_002480633.1	PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: neu:NE1388 aminotransferase class-I
YP_002480635.1	PFAM: Acyl transferase; KEGG: sco:SCO5892 polyketide synthase
YP_002480636.1	KEGG: sfu:Sfum_2232 outer membrane efflux protein
YP_002480637.1	KEGG: sfu:Sfum_2231 multidrug resistance efflux pump-like
YP_002480638.1	PFAM: polysaccharide biosynthesis protein; KEGG: sfu:Sfum_2260 polysaccharide biosynthesis protein
YP_002480639.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvu:DVU3143 iron-sulfur cluster-binding protein
YP_002480640.1	KEGG: dol:Dole_0301 hypothetical protein
YP_002480641.1	KEGG: bpm:BURPS1710b_2554 hypothetical protein
YP_002480642.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_002480643.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002480644.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_002480645.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_002480646.1	PFAM: small multidrug resistance protein; KEGG: sml:Smlt3363 putative transmebrane small multidrug resistance transport protein
YP_002480647.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_002480648.1	KEGG: dvl:Dvul_2239 hypothetical protein
YP_002480649.1	TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: dvl:Dvul_2078 lipoate-protein ligase B
YP_002480650.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_002480651.1	PFAM: Auxin Efflux Carrier; KEGG: dvl:Dvul_1673 auxin efflux carrier
YP_002480652.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: dvl:Dvul_1594 outer membrane chaperone Skp (OmpH)
YP_002480653.1	PFAM: Lytic transglycosylase catalytic; KEGG: dvl:Dvul_1595 lytic transglycosylase, catalytic
YP_002480654.1	KEGG: dvl:Dvul_0756 hypothetical protein
YP_002480655.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: dvu:DVU0053 sulfate permease, putative
YP_002480656.1	PFAM: dihydrouridine synthase DuS; KEGG: dvu:DVU0054 dihydrouridine synthase family protein
YP_002480657.1	KEGG: dvl:Dvul_2906 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein
YP_002480658.1	PFAM: response regulator receiver; CheW domain protein; KEGG: dvl:Dvul_2905 putative CheW protein
YP_002480659.1	TIGRFAM: TonB family protein; KEGG: dvl:Dvul_2863 TonB family protein
YP_002480660.1	TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: dvl:Dvul_2441 selenocysteine-specific translation elongation factor
YP_002480661.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dvl:Dvul_0176 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002480663.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_002480664.1	PFAM: Rhodanese domain protein; KEGG: det:DET1392 rhodanese-like domain-containing protein
YP_002480665.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0348 flagellar hook protein FlgE
YP_002480666.1	PFAM: cyclic nucleotide-binding; KEGG: dvl:Dvul_2554 cyclic nucleotide-binding protein
YP_002480667.1	KEGG: drm:Dred_0607 hypothetical protein
YP_002480668.1	PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: drm:Dred_0362 sodium/sulphate symporter
YP_002480669.1	KEGG: dvu:DVU0799 hypothetical protein
YP_002480670.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: ppd:Ppro_2359 shikimate 5-dehydrogenase
YP_002480671.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_002480672.1	KEGG: dvl:Dvul_0826 heterodisulfide reductase, C subunit
YP_002480673.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_0827 CoB--CoM heterodisulfide reductase
YP_002480674.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0828 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_002480675.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase delta subunit; KEGG: dvl:Dvul_0829 methyl-viologen-reducing hydrogenase, delta subunit
YP_002480676.1	KEGG: dvu:DVU2400 hydrogenase, putative
YP_002480677.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dvl:Dvul_0831 oxidoreductase FAD/NAD(P)-binding subunit
YP_002480678.1	KEGG: glo:Glov_0546 membrane protein-like protein
YP_002480679.1	PFAM: protein of unknown function DUF214; KEGG: dvu:DVU3323 ABC transporter, permease protein
YP_002480680.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU3324 ABC transporter, ATP-binding protein
YP_002480682.1	KEGG: sat:SYN_00794 phosphatidylserine/phosphatidylglycerophosphate related protein
YP_002480683.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_3089 ABC transporter related
YP_002480684.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_002480685.1	PFAM: polysaccharide biosynthesis protein; KEGG: dvl:Dvul_2638 polysaccharide biosynthesis protein
YP_002480686.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-4 domain protein; KEGG: dvl:Dvul_0960 methyl-accepting chemotaxis sensory transducer
YP_002480688.1	PFAM: Extracellular ligand-binding receptor; KEGG: dvl:Dvul_0562 extracellular ligand-binding receptor
YP_002480689.1	PFAM: inner-membrane translocator; KEGG: dvl:Dvul_0563 inner-membrane translocator
YP_002480690.1	PFAM: inner-membrane translocator; KEGG: dvu:DVU2742 high-affinity branched chain amino acid ABC transporter, permease protein
YP_002480691.1	PFAM: ABC transporter related; KEGG: dvl:Dvul_0565 ABC transporter related
YP_002480692.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_0566 ABC transporter related
YP_002480693.1	KEGG: dvu:DVU1980 hypothetical protein
YP_002480694.1	PFAM: Calcium-binding EF-hand-containing protein; KEGG: dvl:Dvul_0821 calcium-binding EF-hand-containing protein
YP_002480695.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU2413 radical SAM domain-containing protein
YP_002480696.1	KEGG: dvl:Dvul_0814 SlyX family protein
YP_002480697.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ppg:PputGB1_3592 GCN5-related N-acetyltransferase
YP_002480698.1	KEGG: dvl:Dvul_2132 hypothetical protein
YP_002480699.1	KEGG: dvl:Dvul_2133 heterodisulfide reductase, transmembrane subunit, putative
YP_002480700.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase delta subunit; KEGG: dvu:DVU0849 heterodisulfide reductase, iron-sulfur-binding subunit, putative
YP_002480701.1	KEGG: dvu:DVU0848 heterodisulfide reductase, putative
YP_002480703.1	catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite
YP_002480704.1	TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2137 adenylylsulfate reductase, beta subunit
YP_002480705.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: dvl:Dvul_2138 5-enolpyruvylshikimate-3-phosphate synthase-like protein
YP_002480709.1	KEGG: lip:LI1185 hypothetical protein
YP_002480710.1	KEGG: dvl:Dvul_1858 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_002480711.1	KEGG: dvl:Dvul_2461 hypothetical protein
YP_002480712.1	PFAM: acriflavin resistance protein; KEGG: dvu:DVU0438 AcrB/AcrD/AcrF family protein
YP_002480713.1	PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A0917 hypothetical protein
YP_002480714.1	PFAM: cobalamin biosynthesis protein CbiB; KEGG: dvu:DVU2237 cobalamin biosynthesis protein CobD, putative
YP_002480715.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_1004 tRNA/rRNA methyltransferase (SpoU)
YP_002480716.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: dvl:Dvul_1002 hydantoinase/oxoprolinase
YP_002480717.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_002480718.1	KEGG: dvl:Dvul_0189 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_002480720.1	PFAM: conserved hypothetical protein; KEGG: dvu:DVU3199 hypothetical protein
YP_002480721.1	TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; KEGG: dvl:Dvul_0187 recombination protein RecR
YP_002480722.1	PFAM: zinc/iron permease; KEGG: dvl:Dvul_2882 zinc/iron permease
YP_002480723.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1295 methyl-accepting chemotaxis sensory transducer
YP_002480724.1	KEGG: dol:Dole_3017 split soret cytochrome c precursor
YP_002480725.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_002480726.1	KEGG: dvl:Dvul_2167 hypothetical protein
YP_002480727.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: dvl:Dvul_2168 glutamyl-tRNA(Gln) amidotransferase, C subunit
YP_002480728.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002480729.1	PFAM: protein of unknown function DUF1063; KEGG: bfr:BF3772 putative inner membrane protein
YP_002480730.1	PFAM: sodium:dicarboxylate symporter; KEGG: ctc:CTC02307 serine/threonine sodium symporter
YP_002480732.1	PFAM: small multidrug resistance protein; KEGG: dac:Daci_0685 small multidrug resistance protein
YP_002480733.1	PFAM: Peptidase M23; KEGG: dvl:Dvul_0148 peptidase M23B
YP_002480734.1	PFAM: PP-loop domain protein; KEGG: dvl:Dvul_0147 PP-loop domain-containing protein
YP_002480735.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: dvl:Dvul_0146 DNA-directed RNA polymerase, omega subunit
YP_002480736.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_002480737.1	PFAM: carbon starvation protein CstA; KEGG: gur:Gura_2790 carbon starvation protein CstA
YP_002480739.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: rru:Rru_A2432 bifunctional sulfur carrier protein/thiazole synthase protein
YP_002480740.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_002480741.1	TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; KEGG: dvu:DVU2093 thiamine biosynthesis protein ThiH
YP_002480742.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: dvl:Dvul_1138 thiamine biosynthesis protein ThiF
YP_002480743.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dvl:Dvul_0347 L-lactate transport
YP_002480744.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dvl:Dvul_0106 L-lactate transport
YP_002480745.1	PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_2885 glycosyl transferase family protein
YP_002480746.1	PFAM: GtrA family protein; KEGG: pzu:PHZ_c0184 GtrA-like protein
YP_002480747.1	PFAM: glycosyl transferase family 2; KEGG: gka:GK3091 glycosyltransferase
YP_002480748.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dvl:Dvul_2886 DegT/DnrJ/EryC1/StrS aminotransferase
YP_002480749.1	PFAM: CheW domain protein; KEGG: dvl:Dvul_1259 putative CheW protein
YP_002480750.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: syn:slr2104 two-component hybrid histidine kinase
YP_002480751.1	TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dvl:Dvul_2161 cobyric acid synthase CobQ
YP_002480752.1	PFAM: AsmA family protein; KEGG: lip:LI0358 AsmA protein
YP_002480753.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_002480754.1	PFAM: OmpA/MotB domain protein; KEGG: dvl:Dvul_0641 OmpA/MotB domain-containing protein
YP_002480755.1	PFAM: shikimate kinase; KEGG: ppd:Ppro_2361 shikimate kinase II
YP_002480756.1	PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_2831 glycosyl transferase family protein
YP_002480757.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dvl:Dvul_2190 H+-transporting two-sector ATPase, B/B' subunit
YP_002480758.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dvl:Dvul_2191 H+-transporting two-sector ATPase, B/B' subunit
YP_002480759.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_002480760.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_002480761.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit
YP_002480762.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_002480763.1	TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: dvl:Dvul_2196 F0F1 ATP synthase subunit epsilon
YP_002480764.1	PFAM: small multidrug resistance protein; KEGG: efa:EF0360 SugE protein
YP_002480765.1	PFAM: small multidrug resistance protein; KEGG: esi:Exig_0410 small multidrug resistance protein
YP_002480766.1	PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_0286 TetR family transcriptional regulator
YP_002480767.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_002480769.1	KEGG: dvl:Dvul_0119 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_002480770.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dvl:Dvul_0118 cytochrome bd ubiquinol oxidase, subunit I
YP_002480771.1	molecular chaperone
YP_002480772.1	PFAM: creatinase; peptidase M24; KEGG: dvl:Dvul_2684 peptidase M24
YP_002480773.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dvl:Dvul_0073 oxidoreductase FAD-binding subunit
YP_002480774.1	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: dvl:Dvul_0072 dihydroorotate dehydrogenase family protein
YP_002480775.1	KEGG: mxa:MXAN_3747 hypothetical protein
YP_002480776.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mxa:MXAN_3746 oxidoreductase, short chain dehydrogenase/reductase family
YP_002480777.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU3052 ABC transporter, ATP-binding protein
YP_002480778.1	PFAM: NUDIX hydrolase; KEGG: dvl:Dvul_0325 NUDIX hydrolase
YP_002480779.1	KEGG: dvl:Dvul_0319 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002480780.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: dvl:Dvul_2519 leucyl aminopeptidase
YP_002480781.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dvl:Dvul_2236 uroporphyrin-III C-methyltransferase
YP_002480782.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: dvl:Dvul_2234 phosphoribosylglycinamide formyltransferase
YP_002480783.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: dvl:Dvul_2634 acylneuraminate cytidylyltransferase
YP_002480785.1	KEGG: dvl:Dvul_2633 cytidine 5'monophosphate N-acetylneuraminic acid synthetase
YP_002480786.1	PFAM: aminotransferase class V; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvl:Dvul_2632 DegT/DnrJ/EryC1/StrS aminotransferase
YP_002480787.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: dvl:Dvul_2631 iron-containing alcohol dehydrogenase
YP_002480788.1	PFAM: protein of unknown function DUF805; KEGG: stp:Strop_0111 hypothetical protein
YP_002480789.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_002480790.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_002480791.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_002480792.1	KEGG: ppf:Pput_3103 hypothetical protein
YP_002480793.1	PFAM: glycosyl transferase family 2; KEGG: pfo:Pfl01_1379 glycosyl transferase family protein
YP_002480794.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pmr:PMI2164 mechanosensitive ion channel protein
YP_002480796.1	KEGG: rpr:RP723 hypothetical protein
YP_002480797.1	KEGG: dsy:DSY0287 hypothetical protein
YP_002480798.1	PFAM: K potassium transporter; KEGG: mac:MA3179 potassium uptake protein Kup
YP_002480799.1	PFAM: protein of unknown function DUF488; KEGG: mem:Memar_1211 hypothetical protein
YP_002480800.1	PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd1364 sugar efflux transporter
YP_002480801.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: lip:LIC103 methyl-accepting chemotaxis protein
YP_002480802.1	PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA
YP_002480803.1	PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit
YP_002480804.1	KEGG: dps:DP0413 hypothetical protein
YP_002480805.1	KEGG: dps:DP0414 hypothetical protein
YP_002480806.1	PFAM: integrase family protein; KEGG: nth:Nther_2955 integrase family protein
YP_002480807.1	PFAM: helix-turn-helix domain protein; KEGG: cac:CAC1578 transcriptional regulator
YP_002480809.1	KEGG: met:M446_6918 hypothetical protein
YP_002480810.1	PFAM: integrase family protein; KEGG: dvl:Dvul_1487 phage integrase family protein
YP_002480811.1	KEGG: dvl:Dvul_2781 hypothetical protein
YP_002480813.1	PFAM: integrase family protein; KEGG: nth:Nther_2955 integrase family protein
YP_002480815.1	KEGG: hch:HCH_10009 BamHI-like type II restriction endonuclease
YP_002480816.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: dol:Dole_0939 DNA methylase N-4/N-6 domain-containing protein
YP_002480818.1	PFAM: aminotransferase class I and II; KEGG: dvu:DVU3223 aspartate aminotransferase
YP_002480819.1	PFAM: sugar fermentation stimulation protein; KEGG: dvl:Dvul_0164 sugar fermentation stimulation protein
YP_002480820.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_002480821.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_002480822.1	involved in the peptidyltransferase reaction during translation
YP_002480823.1	PFAM: ribosomal protein L21; KEGG: dvl:Dvul_2058 50S ribosomal protein L21
YP_002480824.1	PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; Protein of unknown function methylase putative; KEGG: dvl:Dvul_2060 RNA methyltransferase
YP_002480825.1	KEGG: dvl:Dvul_2064 ATP synthase protein I
YP_002480826.1	KEGG: dvl:Dvul_2065 hypothetical protein
YP_002480827.1	TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: dvl:Dvul_2066 ATP synthase F0, A subunit
YP_002480828.1	TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: dvl:Dvul_2067 ATP synthase F0, C subunit
YP_002480830.1	modulates transcription in response to the NADH/NAD(+) redox state
YP_002480831.1	PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dvl:Dvul_2070 cobalamin-5-phosphate synthase CobS
YP_002480832.1	PFAM: nitroreductase; KEGG: dvu:DVU1617 nitroreductase family protein
YP_002480834.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cbk:CLL_A2804 putative signaling protein
YP_002480835.1	PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_0907 glycosyl transferase family protein
YP_002480836.1	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dvu:DVU0405 cobyrinic acid a,c-diamide synthase
YP_002480837.1	PFAM: AICARFT/IMPCHase bienzyme formylation region; KEGG: dvu:DVU3206 phosphoribosylaminoimidazolecarboxamide formyltransferase, putative
YP_002480838.1	KEGG: dvl:Dvul_0181 hypothetical protein
YP_002480839.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_002480840.1	KEGG: dvu:DVU3203 DNA polymerase III, delta prime subunit, putative
YP_002480841.1	KEGG: cbk:CLL_A2232 diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002480842.1	KEGG: dvu:DVU0741 hypothetical protein
YP_002480843.1	PFAM: Methyltransferase type 12; KEGG: kra:Krad_2590 methyltransferase type 11
YP_002480844.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cti:RALTA_B1268 putative sensor signal transduction histidine kinase
YP_002480845.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eba:ebA4468 DNA-binding response regulator OmpR
YP_002480846.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002480847.1	KEGG: dvl:Dvul_0328 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_002480848.1	PFAM: aminotransferase class IV; KEGG: dvl:Dvul_0329 aminotransferase, class IV
YP_002480849.1	PFAM: glycosyl transferase group 1; KEGG: lip:LI0948 glycosyltransferase
YP_002480850.1	PFAM: PP-loop domain protein; KEGG: dvl:Dvul_2830 PP-loop domain-containing protein
YP_002480851.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: dvl:Dvul_0082 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_002480852.1	PFAM: beta-lactamase domain protein; KEGG: dvu:DVU3308 metallo-beta-lactamase family protein
YP_002480853.1	PFAM: flagellin domain protein; KEGG: dvl:Dvul_0790 flagellin domain-containing protein
YP_002480854.1	PFAM: heat shock protein Hsp20; KEGG: lpn:lpg2192 small HspC2 heat shock protein
YP_002480855.1	PFAM: flagellin domain protein; KEGG: dvl:Dvul_0790 flagellin domain-containing protein
YP_002480856.1	KEGG: dvu:DVU3151 putative tRNA modifying protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002480857.1	KEGG: cdf:CD0522 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAC repeat-containing protein
YP_002480858.1	KEGG: dvu:DVU2447 hypothetical protein
YP_002480859.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_002480860.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_002480861.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_002480862.1	KEGG: dvl:Dvul_2089 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: AAA ATPase
YP_002480863.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: asa:ASA_1293 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_002480865.1	PFAM: AMMECR1 domain protein; KEGG: dvl:Dvul_2231 AMMECR1 domain-containing protein
YP_002480866.1	PFAM: Dissimilatory sulfite reductase D; KEGG: dvl:Dvul_2530 dissimilatory sulfite reductase B
YP_002480867.1	KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region
YP_002480868.1	KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region
YP_002480869.1	KEGG: dvl:Dvul_2533 hypothetical protein
YP_002480870.1	KEGG: dvl:Dvul_2535 hypothetical protein
YP_002480871.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: dvl:Dvul_2537 rare lipoprotein A
YP_002480872.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_002480873.1	PFAM: protein of unknown function DUF1385; KEGG: dvl:Dvul_0452 putative lipoprotein
YP_002480874.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_002480875.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: dvl:Dvul_0454 hemolysin A
YP_002480877.1	KEGG: dvl:Dvul_2213 hypothetical protein
YP_002480878.1	KEGG: dvl:Dvul_2211 tetratricopeptide domain-containing protein
YP_002480879.1	KEGG: dvl:Dvul_2210 putative lipoprotein
YP_002480880.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002480881.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nmc:NMC1495 hypothetical protein
YP_002480882.1	KEGG: ngk:NGK_2503 SdaA; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_002480883.1	KEGG: drm:Dred_2420 C_GCAxxG_C_C family protein
YP_002480884.1	KEGG: dvl:Dvul_2646 hypothetical protein
YP_002480885.1	KEGG: dvl:Dvul_2877 eIF-2B alpha/beta/delta-related uncharacterized proteins; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related
YP_002480886.1	PFAM: aminotransferase class I and II; KEGG: dvl:Dvul_2093 aminotransferase, class I and II
YP_002480887.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_002480888.1	KEGG: mba:Mbar_A2522 hypothetical protein
YP_002480889.1	PFAM: protein of unknown function UPF0047; KEGG: dvl:Dvul_2442 hypothetical protein
YP_002480890.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: dvl:Dvul_2890 DNA-directed DNA polymerase
YP_002480891.1	PFAM: protein of unknown function DUF55; KEGG: dvl:Dvul_0815 hypothetical protein
YP_002480892.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: dvl:Dvul_2458 DNA mismatch repair protein MutL
YP_002480893.1	KEGG: dvl:Dvul_2455 hypothetical protein
YP_002480894.1	KEGG: dvl:Dvul_2454 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_002480895.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_002480896.1	PFAM: FG-GAP repeat protein; KEGG: dvl:Dvul_0197 hypothetical protein
YP_002480897.1	PFAM: Fmu (Sun) domain protein; KEGG: dvu:DVU3189 NOL1/NOP2/sun family protein
YP_002480898.1	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: dvl:Dvul_0310 (NiFe) hydrogenase maturation protein HypF
YP_002480899.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: dvl:Dvul_0311 cupin 2 domain-containing protein
YP_002480900.1	PFAM: AMP-dependent synthetase and ligase; KEGG: dvl:Dvul_0312 acyl-CoA synthetase
YP_002480901.1	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: dvu:DVU3149 signal peptide peptidase SppA, 36K type
YP_002480904.1	KEGG: sse:Ssed_2182 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002480905.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_002480906.1	PFAM: anaerobic cobalt chelatase; KEGG: dvl:Dvul_2310 anaerobic cobalt chelatase
YP_002480907.1	PFAM: YheO domain protein; KEGG: drm:Dred_0613 YheO domain-containing protein
YP_002480909.1	KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein
YP_002480910.1	KEGG: dvl:Dvul_2452 phenylacetate--CoA ligase
YP_002480911.1	PFAM: Asparaginase/glutaminase; KEGG: bxe:Bxe_A2464 L-asparaginase, type II
YP_002480912.1	PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_2705 probable acetyltransferase
YP_002480913.1	PFAM: major facilitator superfamily MFS_1; KEGG: msu:MS0785 ProP protein
YP_002480914.1	PFAM: BCCT transporter; KEGG: amc:MADE_00106 putative choline-glycine betaine transporter
YP_002480915.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dsy:DSY4968 hypothetical protein
YP_002480917.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; AAA ATPase; KEGG: sfu:Sfum_1160 sigma54 specific transcriptional regulator, fis family
YP_002480919.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dps:DP0303 dihydrolipoamide dehydrogenase, E3 component
YP_002480920.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ank:AnaeK_2621 glycine cleavage system H protein
YP_002480921.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pca:Pcar_0941 hypothetical protein
YP_002480923.1	KEGG: pst:PSPTO_4754 hypothetical protein
YP_002480924.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: cyt:cce_1086 RNA-directed DNA polymerase
YP_002480925.1	KEGG: oan:Oant_0679 hypothetical protein
YP_002480926.1	PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit
YP_002480927.1	PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA
YP_002480928.1	KEGG: pph:Ppha_1845 transcriptional regulator, XRE family
YP_002480929.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: sal:Sala_2616 filamentation induced by cAMP protein Fic
YP_002480930.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: pca:Pcar_2123 hypothetical protein
YP_002480931.1	PFAM: integrase family protein; KEGG: dvl:Dvul_2564 phage integrase family protein
YP_002480932.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: dvl:Dvul_2510 phospholipase D/transphosphatidylase
YP_002480933.1	PFAM: ATP-binding region ATPase domain protein; KEGG: dvu:DVU2580 response regulator
YP_002480934.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0668 TPR repeat-containing protein
YP_002480935.1	KEGG: dvu:DVU1045 hypothetical protein
YP_002480936.1	KEGG: dvl:Dvul_1947 hypothetical protein
YP_002480937.1	PFAM: cytochrome c assembly protein; KEGG: dvl:Dvul_1946 cytochrome c assembly protein
YP_002480938.1	PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: dvl:Dvul_1945 cytochrome c-type biogenesis protein CcmB
YP_002480939.1	KEGG: dvl:Dvul_1944 ABC transporter related; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002480940.1	PFAM: cytochrome c assembly protein; KEGG: dvl:Dvul_1943 cytochrome c assembly protein
YP_002480941.1	KEGG: dvl:Dvul_1942 cytochrome c-type biogenesis protein CcmE
YP_002480942.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dps:DP0230 hypothetical protein
YP_002480943.1	TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: dvl:Dvul_0229 glucosamine--fructose-6-phosphate aminotransferase, isomerizing
YP_002480944.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: dvl:Dvul_1929 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_002480945.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sus:Acid_7913 NifA subfamily transcriptional regulator
YP_002480946.1	PFAM: SAF domain protein; KEGG: bpt:Bpet0415 hypothetical protein
YP_002480947.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: csa:Csal_1766 altronate dehydratase
YP_002480948.1	PFAM: conserved hypothetical protein; KEGG: dsy:DSY3249 hypothetical protein
YP_002480949.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: dsy:DSY3248 hypothetical protein
YP_002480950.1	KEGG: dsy:DSY3247 hypothetical protein
YP_002480951.1	KEGG: mta:Moth_1926 hypothetical protein
YP_002480952.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsq:Rsph17025_3165 hypothetical protein
YP_002480953.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_1931 two component, sigma54 specific, Fis family transcriptional regulator
YP_002480954.1	PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: dvl:Dvul_1932 hypothetical protein