-- dump date 20140619_064200 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002478599.1 220903287 7286102 complement(394..618) 1 NC_011883.1 hypothetical protein 618 7286102 Ddes_0001 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478599.1 394 R 525146 CDS YP_002478600.1 220903288 7283653 complement(649..2220) 1 NC_011883.1 PFAM: Peptidase M23; KEGG: dvl:Dvul_0008 peptidase M23B; peptidase M23 2220 7283653 Ddes_0002 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M23 YP_002478600.1 649 R 525146 CDS YP_002478601.1 220903289 7283654 2640..4013 1 NC_011883.1 PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; KEGG: dvu:DVU0001 chromosomal replication initiator protein DnaA; chromosomal replication initiator DnaA domain-containing protein 4013 7283654 Ddes_0003 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosomal replication initiator DnaA domain-containing protein YP_002478601.1 2640 D 525146 CDS YP_002478602.1 220903290 7283655 4162..5316 1 NC_011883.1 KEGG: dvu:DVU0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 5316 7283655 Ddes_0004 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA polymerase III subunit beta YP_002478602.1 4162 D 525146 CDS YP_002478603.1 220903291 7283656 5316..7721 1 NC_011883.1 KEGG: dvl:Dvul_0005 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 7721 7283656 Ddes_0005 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA gyrase subunit B YP_002478603.1 5316 D 525146 CDS YP_002478604.1 220903292 7283657 7987..10554 1 NC_011883.1 KEGG: dvl:Dvul_0004 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 10554 7283657 Ddes_0006 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA gyrase subunit A YP_002478604.1 7987 D 525146 CDS YP_002478605.1 220903293 7283658 10569..11483 1 NC_011883.1 KEGG: dvl:Dvul_0003 putative lipoprotein; putative lipoprotein 11483 7283658 Ddes_0007 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative lipoprotein YP_002478605.1 10569 D 525146 CDS YP_002478606.1 220903294 7283659 11489..12892 1 NC_011883.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: dvl:Dvul_2807 amidophosphoribosyltransferase; amidophosphoribosyltransferase 12892 7283659 Ddes_0008 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amidophosphoribosyltransferase YP_002478606.1 11489 D 525146 CDS YP_002478607.1 220903295 7283660 13137..14387 1 NC_011883.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 14387 hisS 7283660 hisS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidyl-tRNA synthetase YP_002478607.1 13137 D 525146 CDS YP_002478608.1 220903296 7283661 14407..16290 1 NC_011883.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 16290 aspS 7283661 aspS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartyl-tRNA synthetase YP_002478608.1 14407 D 525146 CDS YP_002478609.1 220903297 7283662 16332..16850 1 NC_011883.1 KEGG: dvl:Dvul_0029 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 16850 7283662 Ddes_0011 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptide deformylase YP_002478609.1 16332 D 525146 CDS YP_002478610.1 220903298 7283663 16823..17836 1 NC_011883.1 KEGG: dvu:DVU3365 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 17836 7283663 Ddes_0012 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methionyl-tRNA formyltransferase YP_002478610.1 16823 D 525146 CDS YP_002478611.1 220903299 7283664 18207..19082 1 NC_011883.1 PFAM: protein of unknown function DUF116; KEGG: dvl:Dvul_0031 hypothetical protein; hypothetical protein 19082 7283664 Ddes_0013 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478611.1 18207 D 525146 CDS YP_002478612.1 220903300 7283665 19079..20659 1 NC_011883.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: lip:LI0876 tRNA and rRNA cytosine-C5-methylases; NusB/RsmB/TIM44 20659 7283665 Ddes_0014 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NusB/RsmB/TIM44 YP_002478612.1 19079 D 525146 CDS YP_002478613.1 220903301 7283666 complement(21378..22292) 1 NC_011883.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: dvu:DVU3360 ParB family protein; parB-like partition protein 22292 7283666 Ddes_0015 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 parB-like partition protein YP_002478613.1 21378 R 525146 CDS YP_002478614.1 220903302 7283667 22528..22935 1 NC_011883.1 KEGG: dvl:Dvul_0036 hypothetical protein; hypothetical protein 22935 7283667 Ddes_0016 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478614.1 22528 D 525146 CDS YP_002478615.1 220903303 7283668 complement(23050..23838) 1 NC_011883.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_0037 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 23838 7283668 Ddes_0017 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cobyrinic acid ac-diamide synthase YP_002478615.1 23050 R 525146 CDS YP_002478616.1 220903304 7283669 24135..24542 1 NC_011883.1 PFAM: response regulator receiver; KEGG: dvl:Dvul_0150 response regulator receiver protein; response regulator receiver protein 24542 7283669 Ddes_0018 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002478616.1 24135 D 525146 CDS YP_002478617.1 220903305 7283670 24564..25394 1 NC_011883.1 PFAM: DSBA oxidoreductase; KEGG: dvl:Dvul_2927 DsbA oxidoreductase; DSBA oxidoreductase 25394 7283670 Ddes_0019 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DSBA oxidoreductase YP_002478617.1 24564 D 525146 CDS YP_002478618.1 220903306 7283671 complement(26392..27039) 1 NC_011883.1 KEGG: dvl:Dvul_0201 hypothetical protein; hypothetical protein 27039 7283671 Ddes_0020 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478618.1 26392 R 525146 CDS YP_002478619.1 220903307 7283672 complement(27922..28419) 1 NC_011883.1 PFAM: NLP/P60 protein; KEGG: dvu:DVU3188 NLP/P60 family protein; NLP/P60 protein 28419 7283672 Ddes_0021 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NLP/P60 protein YP_002478619.1 27922 R 525146 CDS YP_002478620.1 220903308 7283673 complement(29190..32714) 1 NC_011883.1 PFAM: UvrD/REP helicase; KEGG: dvl:Dvul_2483 UvrD/REP helicase; UvrD/REP helicase 32714 7283673 Ddes_0022 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UvrD/REP helicase YP_002478620.1 29190 R 525146 CDS YP_002478621.1 220903309 7283674 complement(32728..33735) 1 NC_011883.1 KEGG: dvu:DVU0452 hypothetical protein; hypothetical protein 33735 7283674 Ddes_0023 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478621.1 32728 R 525146 CDS YP_002478622.1 220903310 7283675 complement(33825..36089) 1 NC_011883.1 PFAM: peptidase U32; KEGG: dvl:Dvul_0074 peptidase U32; peptidase U32 36089 7283675 Ddes_0024 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase U32 YP_002478622.1 33825 R 525146 CDS YP_002478623.1 220903311 7283676 complement(36086..37102) 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_0038 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 37102 7283676 Ddes_0025 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent epimerase/dehydratase YP_002478623.1 36086 R 525146 CDS YP_002478624.1 220903312 7283677 37280..38386 1 NC_011883.1 KEGG: dvl:Dvul_1966 hypothetical protein; hypothetical protein 38386 7283677 Ddes_0026 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478624.1 37280 D 525146 CDS YP_002478625.1 220903313 7283678 complement(38411..39103) 1 NC_011883.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: dvl:Dvul_0292 precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase CbiC/CobH 39103 7283678 Ddes_0027 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 precorrin-8X methylmutase CbiC/CobH YP_002478625.1 38411 R 525146 CDS YP_002478626.1 220903314 7283679 complement(39141..40895) 1 NC_011883.1 PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dvl:Dvul_0293 cobyrinic acid a,c-diamide synthase; CobB/CobQ domain-containing protein glutamine amidotransferase 40895 7283679 Ddes_0028 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CobB/CobQ domain-containing protein glutamine amidotransferase YP_002478626.1 39141 R 525146 CDS YP_002478627.1 220903315 7283680 complement(41207..41443) 1 NC_011883.1 KEGG: dvl:Dvul_0294 hypothetical protein; hypothetical protein 41443 7283680 Ddes_0029 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478627.1 41207 R 525146 CDS YP_002478628.1 220903316 7283681 complement(41453..42502) 1 NC_011883.1 PFAM: aminodeoxychorismate lyase; KEGG: dvl:Dvul_0308 aminodeoxychorismate lyase; aminodeoxychorismate lyase 42502 7283681 Ddes_0030 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aminodeoxychorismate lyase YP_002478628.1 41453 R 525146 CDS YP_002478629.1 220903317 7283682 complement(42499..42921) 1 NC_011883.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: dvl:Dvul_0307 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 42921 7283682 Ddes_0031 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Holliday junction resolvase YqgF YP_002478629.1 42499 R 525146 CDS YP_002478630.1 220903318 7283683 complement(42937..43926) 1 NC_011883.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 43926 7283683 Ddes_0032 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tryptophanyl-tRNA synthetase YP_002478630.1 42937 R 525146 CDS YP_002478631.1 220903319 7283684 complement(43946..44620) 1 NC_011883.1 PFAM: peptidase M50; KEGG: lip:LI0021 Zn-dependent proteases; peptidase M50 44620 7283684 Ddes_0033 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M50 YP_002478631.1 43946 R 525146 CDS YP_002478632.1 220903320 7283685 complement(44686..44991) 1 NC_011883.1 KEGG: dvu:DVU0136 hypothetical protein; hypothetical protein 44991 7283685 Ddes_0034 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478632.1 44686 R 525146 CDS YP_002478633.1 220903321 7283686 complement(45015..45479) 1 NC_011883.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: mla:Mlab_0460 hypothetical protein; C_GCAxxG_C_C family protein 45479 7283686 Ddes_0035 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 C_GCAxxG_C_C family protein YP_002478633.1 45015 R 525146 CDS YP_002478634.1 220903322 7283687 complement(45506..46495) 1 NC_011883.1 PFAM: nucleoside recognition domain protein; KEGG: dvl:Dvul_2272 hypothetical protein; nucleoside recognition domain-containing protein 46495 7283687 Ddes_0036 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nucleoside recognition domain-containing protein YP_002478634.1 45506 R 525146 CDS YP_002478635.1 220903323 7283688 complement(46566..47036) 1 NC_011883.1 PFAM: ribonuclease H; KEGG: dvl:Dvul_2274 ribonuclease H; Ribonuclease H 47036 7283688 Ddes_0037 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ribonuclease H YP_002478635.1 46566 R 525146 CDS YP_002478636.1 220903324 7283689 complement(47279..49024) 1 NC_011883.1 PFAM: chemotaxis sensory transducer; KEGG: dvu:DVU1975 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 49024 7283689 Ddes_0038 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002478636.1 47279 R 525146 CDS YP_002478637.1 220903325 7283690 complement(49852..51273) 1 NC_011883.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 51273 7283690 Ddes_0039 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 S-adenosyl-L-homocysteine hydrolase YP_002478637.1 49852 R 525146 CDS YP_002478638.1 220903326 7283691 complement(51376..52299) 1 NC_011883.1 PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dvl:Dvul_2348 methyltransferase type 11; ArsR family transcriptional regulator 52299 7283691 Ddes_0040 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ArsR family transcriptional regulator YP_002478638.1 51376 R 525146 CDS YP_002478639.1 220903327 7283692 52442..52972 1 NC_011883.1 PFAM: protein of unknown function DUF721; KEGG: dvl:Dvul_2350 hypothetical protein; hypothetical protein 52972 7283692 Ddes_0041 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478639.1 52442 D 525146 CDS YP_002478640.1 220903328 7283693 53493..53870 1 NC_011883.1 KEGG: dvl:Dvul_2048 hypothetical protein; hypothetical protein 53870 7283693 Ddes_0042 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478640.1 53493 D 525146 CDS YP_002478641.1 220903329 7283694 complement(54382..55287) 1 NC_011883.1 KEGG: dvl:Dvul_2321 hypothetical protein; hypothetical protein 55287 7283694 Ddes_0043 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478641.1 54382 R 525146 CDS YP_002478642.1 220903330 7283695 55813..59364 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: dvl:Dvul_0306 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 59364 7283695 Ddes_0044 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD linked oxidase domain-containing protein YP_002478642.1 55813 D 525146 CDS YP_002478643.1 220903331 7283696 complement(59454..60860) 1 NC_011883.1 KEGG: lip:LI0261 glutamate decarboxylase isozyme; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; glutamate decarboxylase 60860 7283696 Ddes_0045 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamate decarboxylase YP_002478643.1 59454 R 525146 CDS YP_002478644.1 220903332 7283697 complement(60864..62351) 1 NC_011883.1 PFAM: amino acid permease-associated region; KEGG: lip:LI0262 amino acid transporters; amino acid permease-associated protein 62351 7283697 Ddes_0046 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid permease-associated protein YP_002478644.1 60864 R 525146 CDS YP_002478645.1 220903333 7283698 62754..64253 1 NC_011883.1 PFAM: amino acid permease-associated region; KEGG: sfv:SFV_2499 putative amino acid antiporter; amino acid permease-associated protein 64253 7283698 Ddes_0047 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid permease-associated protein YP_002478645.1 62754 D 525146 CDS YP_002478646.1 220903334 7283699 64339..65271 1 NC_011883.1 catalyzes the formation of glutamate from glutamine; glutaminase 65271 7283699 Ddes_0048 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutaminase YP_002478646.1 64339 D 525146 CDS YP_002478647.1 220903335 7283700 complement(65454..66422) 1 NC_011883.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sen:SACE_4268 AraC family transcription regulator; AraC family transcriptional regulator 66422 7283700 Ddes_0049 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AraC family transcriptional regulator YP_002478647.1 65454 R 525146 CDS YP_002478648.1 220903336 7283701 66603..67442 1 NC_011883.1 PFAM: ThiJ/PfpI domain protein; KEGG: plu:plu3545 hypothetical protein; ThiJ/PfpI domain-containing protein 67442 7283701 Ddes_0050 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ThiJ/PfpI domain-containing protein YP_002478648.1 66603 D 525146 CDS YP_002478649.1 220903337 7283702 complement(67564..68517) 1 NC_011883.1 PFAM: band 7 protein; KEGG: cts:Ctha_1815 band 7 protein; hypothetical protein 68517 7283702 Ddes_0051 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478649.1 67564 R 525146 CDS YP_002478650.1 220903338 7283703 complement(68695..69171) 1 NC_011883.1 PFAM: protein of unknown function DUF107; KEGG: dps:DP1870 hypothetical protein; hypothetical protein 69171 7283703 Ddes_0052 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478650.1 68695 R 525146 CDS YP_002478651.1 220903339 7283704 complement(69297..70250) 1 NC_011883.1 KEGG: dvl:Dvul_2440 hypothetical protein; hypothetical protein 70250 7283704 Ddes_0053 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478651.1 69297 R 525146 CDS YP_002478652.1 220903340 7283705 complement(70353..72584) 1 NC_011883.1 KEGG: dvl:Dvul_2438 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 72584 7283705 Ddes_0054 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polynucleotide phosphorylase/polyadenylase YP_002478652.1 70353 R 525146 CDS YP_002478653.1 220903341 7283706 complement(72753..73022) 1 NC_011883.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 73022 rpsO 7283706 rpsO Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S15 YP_002478653.1 72753 R 525146 CDS YP_002478654.1 220903342 7283707 complement(73067..74131) 1 NC_011883.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: dvl:Dvul_2436 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 74131 7283707 Ddes_0056 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA pseudouridine synthase B YP_002478654.1 73067 R 525146 CDS YP_002478655.1 220903343 7283708 complement(74700..75809) 1 NC_011883.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: lip:LI0536 exopolyphosphatase-like protein; phosphoesterase RecJ domain-containing protein 75809 7283708 Ddes_0057 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoesterase RecJ domain-containing protein YP_002478655.1 74700 R 525146 CDS YP_002478656.1 220903344 7283709 complement(75796..76113) 1 NC_011883.1 PFAM: protein of unknown function DUF503; KEGG: dvl:Dvul_2434 hypothetical protein; hypothetical protein 76113 7283709 Ddes_0058 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478656.1 75796 R 525146 CDS YP_002478657.1 220903345 7283710 complement(76502..79495) 1 NC_011883.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 79495 infB 7283710 infB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 translation initiation factor IF-2 YP_002478657.1 76502 R 525146 CDS YP_002478658.1 220903346 7283711 complement(79488..79733) 1 NC_011883.1 PFAM: protein of unknown function DUF448; KEGG: dvu:DVU0509 hypothetical protein; hypothetical protein 79733 7283711 Ddes_0060 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478658.1 79488 R 525146 CDS YP_002478659.1 220903347 7283712 complement(79744..81093) 1 NC_011883.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 81093 nusA 7283712 nusA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transcription elongation factor NusA YP_002478659.1 79744 R 525146 CDS YP_002478660.1 220903348 7283713 complement(81202..81978) 1 NC_011883.1 PFAM: protein of unknown function DUF150; KEGG: dvl:Dvul_2430 hypothetical protein; hypothetical protein 81978 7283713 Ddes_0062 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478660.1 81202 R 525146 CDS YP_002478661.1 220903349 7283714 82479..84047 1 NC_011883.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; KEGG: dvl:Dvul_1295 methyl-accepting chemotaxis sensory transducer; Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer 84047 7283714 Ddes_0063 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer YP_002478661.1 82479 D 525146 CDS YP_002478662.1 220903350 7283715 complement(84087..85394) 1 NC_011883.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: NUDIX hydrolase; helix-hairpin-helix motif; HhH-GPD family protein; KEGG: dvl:Dvul_2698 A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 85394 7283715 Ddes_0064 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 A/G-specific adenine glycosylase YP_002478662.1 84087 R 525146 CDS YP_002478663.1 220903351 7283716 85516..86025 1 NC_011883.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: dvl:Dvul_2696 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 86025 7283716 Ddes_0065 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_002478663.1 85516 D 525146 CDS YP_002478664.1 220903352 7283717 86356..86835 1 NC_011883.1 hypothetical protein 86835 7283717 Ddes_0066 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478664.1 86356 D 525146 CDS YP_002478665.1 220903353 7283718 87314..87829 1 NC_011883.1 PFAM: YceI family protein; KEGG: ote:Oter_2283 YceI family protein; hypothetical protein 87829 7283718 Ddes_0067 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478665.1 87314 D 525146 CDS YP_002478666.1 220903354 7283719 complement(88910..89551) 1 NC_011883.1 PFAM: class II aldolase/adducin family protein; KEGG: dvl:Dvul_2810 class II aldolase/adducin family protein; class II aldolase/adducin family protein 89551 7283719 Ddes_0068 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 class II aldolase/adducin family protein YP_002478666.1 88910 R 525146 CDS YP_002478667.1 220903355 7283720 complement(89548..90456) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein; family 2 glycosyl transferase 90456 7283720 Ddes_0069 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002478667.1 89548 R 525146 CDS YP_002478668.1 220903356 7283721 complement(90458..91528) 1 NC_011883.1 KEGG: dvu:DVU0157 thiamin-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; thiamine-monophosphate kinase 91528 7283721 Ddes_0070 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine-monophosphate kinase YP_002478668.1 90458 R 525146 CDS YP_002478669.1 220903357 7283722 complement(91530..93836) 1 NC_011883.1 PFAM: UvrD/REP helicase; KEGG: dvl:Dvul_2812 UvrD/REP helicase; UvrD/REP helicase 93836 7283722 Ddes_0071 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UvrD/REP helicase YP_002478669.1 91530 R 525146 CDS YP_002478670.1 220903358 7283723 94442..94975 1 NC_011883.1 KEGG: dvu:DVU3281 hypothetical protein; hypothetical protein 94975 7283723 Ddes_0072 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478670.1 94442 D 525146 CDS YP_002478671.1 220903359 7283724 95095..95772 1 NC_011883.1 PFAM: putative rRNA methylase; KEGG: gme:Gmet_2819 putative rRNA methylase; putative rRNA methylase 95772 7283724 Ddes_0073 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative rRNA methylase YP_002478671.1 95095 D 525146 CDS YP_002478672.1 220903360 7283725 96075..96959 1 NC_011883.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: dvu:DVU0421 agmatinase, putative; agmatinase 96959 7283725 Ddes_0074 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 agmatinase YP_002478672.1 96075 D 525146 CDS YP_002478673.1 220903361 7283726 97190..98023 1 NC_011883.1 KEGG: efa:EF1860 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 98023 7283726 Ddes_0075 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002478673.1 97190 D 525146 CDS YP_002478674.1 220903362 7283727 complement(98174..99106) 1 NC_011883.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bth:BT_1219 hypothetical protein; Dyp-type peroxidase family protein 99106 7283727 Ddes_0076 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Dyp-type peroxidase family protein YP_002478674.1 98174 R 525146 CDS YP_002478675.1 220903363 7283728 complement(99214..102474) 1 NC_011883.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: dvu:DVU0256 DEAD-box ATP dependent DNA helicase; DEAD/DEAH box helicase 102474 7283728 Ddes_0077 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DEAD/DEAH box helicase YP_002478675.1 99214 R 525146 CDS YP_002478676.1 220903364 7283729 complement(102489..103223) 1 NC_011883.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_2637 hexapaptide repeat-containing transferase; transferase hexapeptide repeat containing protein 103223 7283729 Ddes_0078 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transferase hexapeptide repeat containing protein YP_002478676.1 102489 R 525146 CDS YP_002478677.1 220903365 7283730 complement(103413..103958) 1 NC_011883.1 PFAM: NADPH-dependent FMN reductase; KEGG: dar:Daro_2797 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) 103958 7283730 Ddes_0079 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD(P)H dehydrogenase (quinone) YP_002478677.1 103413 R 525146 CDS YP_002478678.1 220903366 7283731 complement(104183..104602) 1 NC_011883.1 KEGG: sth:STH3036 hypothetical protein; hypothetical protein 104602 7283731 Ddes_0080 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478678.1 104183 R 525146 CDS YP_002478679.1 220903367 7283732 complement(104886..106469) 1 NC_011883.1 PFAM: cytochrome c552; KEGG: dvl:Dvul_2333 nitrite reductase (cytochrome; ammonia-forming); Nitrite reductase 106469 7283732 Ddes_0081 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Nitrite reductase YP_002478679.1 104886 R 525146 CDS YP_002478680.1 220903368 7283733 complement(106462..106929) 1 NC_011883.1 KEGG: dvl:Dvul_2334 NapC/NirT cytochrome c family protein; NapC/NirT cytochrome c family protein 106929 7283733 Ddes_0082 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NapC/NirT cytochrome c family protein YP_002478680.1 106462 R 525146 CDS YP_002478681.1 220903369 7283734 107283..109907 1 NC_011883.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dvl:Dvul_2335 multi-sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 109907 7283734 Ddes_0083 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Hpt sensor hybrid histidine kinase YP_002478681.1 107283 D 525146 CDS YP_002478682.1 220903370 7283735 109907..111439 1 NC_011883.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_2336 two component, sigma54 specific, Fis family transcriptional regulator; putative Fis family two component sigma-54 specific transcriptional regulator 111439 7283735 Ddes_0084 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative Fis family two component sigma-54 specific transcriptional regulator YP_002478682.1 109907 D 525146 CDS YP_002478683.1 220903371 7283736 111867..112124 1 NC_011883.1 KEGG: dvl:Dvul_2341 hypothetical protein; hypothetical protein 112124 7283736 Ddes_0085 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478683.1 111867 D 525146 CDS YP_002478684.1 220903372 7283737 complement(112349..114148) 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: dvu:DVU0344 methyl-accepting chemotaxis protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 114148 7283737 Ddes_0086 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cache sensor-containing methyl-accepting chemotaxis sensory transducer YP_002478684.1 112349 R 525146 CDS YP_002478685.1 220903373 7283739 complement(115009..115284) 1 NC_011883.1 PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_2207 histone family protein DNA-binding protein; histone family protein DNA-binding protein 115284 7283739 Ddes_0087 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histone family protein DNA-binding protein YP_002478685.1 115009 R 525146 CDS YP_002478686.1 220903374 7283740 complement(115635..116570) 1 NC_011883.1 KEGG: dvl:Dvul_2202 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 116570 7283740 Ddes_0088 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamate racemase YP_002478686.1 115635 R 525146 CDS YP_002478687.1 220903375 7283741 complement(116616..117569) 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: dvu:DVU0770 hypothetical protein; hypothetical protein 117569 7283741 Ddes_0089 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478687.1 116616 R 525146 CDS YP_002478688.1 220903376 7283742 117878..118531 1 NC_011883.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 118531 hisH 7283742 hisH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 imidazole glycerol phosphate synthase subunit HisH YP_002478688.1 117878 D 525146 CDS YP_002478689.1 220903377 7283743 118521..119300 1 NC_011883.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 119300 7283743 Ddes_0091 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 imidazole glycerol phosphate synthase subunit HisF YP_002478689.1 118521 D 525146 CDS YP_002478690.1 220903378 7283744 119529..120461 1 NC_011883.1 KEGG: dvl:Dvul_0429 hypothetical protein; hypothetical protein 120461 7283744 Ddes_0092 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478690.1 119529 D 525146 CDS YP_002478691.1 220903379 7283745 120493..120726 1 NC_011883.1 KEGG: dvl:Dvul_0428 hypothetical protein; hypothetical protein 120726 7283745 Ddes_0093 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478691.1 120493 D 525146 CDS YP_002478692.1 220903380 7283746 121331..121672 1 NC_011883.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dvl:Dvul_0427 FmdB family regulatory protein; FmdB family regulatory protein 121672 7283746 Ddes_0094 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FmdB family regulatory protein YP_002478692.1 121331 D 525146 CDS YP_002478693.1 220903381 7283747 121680..122990 1 NC_011883.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: dvl:Dvul_0426 adenylosuccinate lyase; adenylosuccinate lyase 122990 7283747 Ddes_0095 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylosuccinate lyase YP_002478693.1 121680 D 525146 CDS YP_002478694.1 220903382 7283748 123003..123584 1 NC_011883.1 KEGG: dvl:Dvul_0425 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 123584 7283748 Ddes_0096 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 orotate phosphoribosyltransferase YP_002478694.1 123003 D 525146 CDS YP_002478695.1 220903383 7283749 123760..126228 1 NC_011883.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: dvl:Dvul_0424 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 126228 7283749 Ddes_0097 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ErfK/YbiS/YcfS/YnhG family protein YP_002478695.1 123760 D 525146 CDS YP_002478696.1 220903384 7283750 126225..126971 1 NC_011883.1 KEGG: dvl:Dvul_0423 hypothetical protein; hypothetical protein 126971 7283750 Ddes_0098 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478696.1 126225 D 525146 CDS YP_002478697.1 220903385 7283751 complement(127384..129690) 1 NC_011883.1 PFAM: aconitate hydratase domain protein; KEGG: dsy:DSY4204 hypothetical protein; hypothetical protein 129690 7283751 Ddes_0099 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478697.1 127384 R 525146 CDS YP_002478698.1 220903386 7283752 complement(129739..130443) 1 NC_011883.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bcz:BCZK2117 homoserine/threonine efflux protein; lysine exporter protein LysE/YggA 130443 7283752 Ddes_0100 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lysine exporter protein LysE/YggA YP_002478698.1 129739 R 525146 CDS YP_002478699.1 220903387 7283753 complement(130685..131827) 1 NC_011883.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: dvl:Dvul_2464 isocitrate/isopropylmalate dehydrogenase; isocitrate/isopropylmalate dehydrogenase 131827 7283753 Ddes_0101 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 isocitrate/isopropylmalate dehydrogenase YP_002478699.1 130685 R 525146 CDS YP_002478700.1 220903388 7283754 complement(131915..133750) 1 NC_011883.1 PFAM: pyruvate carboxyltransferase; KEGG: dvl:Dvul_2536 pyruvate carboxyltransferase; pyruvate carboxyltransferase 133750 7283754 Ddes_0102 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate carboxyltransferase YP_002478700.1 131915 R 525146 CDS YP_002478701.1 220903389 7283755 133985..136192 1 NC_011883.1 PFAM: ribonuclease II; KEGG: dvl:Dvul_0179 ribonuclease II; ribonuclease II 136192 7283755 Ddes_0103 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribonuclease II YP_002478701.1 133985 D 525146 CDS YP_002478702.1 220903390 7283756 136302..136973 1 NC_011883.1 PFAM: protein of unknown function DUF205; KEGG: dvl:Dvul_0178 hypothetical protein; membrane protein 136973 7283756 Ddes_0104 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 membrane protein YP_002478702.1 136302 D 525146 CDS YP_002478703.1 220903391 7283757 137283..138728 1 NC_011883.1 KEGG: dvl:Dvul_0177 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 138728 7283757 Ddes_0105 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 threonine synthase YP_002478703.1 137283 D 525146 CDS YP_002478704.1 220903392 7283758 138947..139396 1 NC_011883.1 PFAM: transcription activator effector binding; KEGG: aoe:Clos_2726 transcription activator effector binding; transcription activator effector binding protein 139396 7283758 Ddes_0106 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transcription activator effector binding protein YP_002478704.1 138947 D 525146 CDS YP_002478705.1 220903393 7283759 complement(139534..140883) 1 NC_011883.1 KEGG: dvl:Dvul_2655 sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 140883 7283759 Ddes_0107 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_002478705.1 139534 R 525146 CDS YP_002478706.1 220903394 7283760 complement(141243..142391) 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_2654 glycosyl transferase, group 1; group 1 glycosyl transferase 142391 7283760 Ddes_0108 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002478706.1 141243 R 525146 CDS YP_002478707.1 220903395 7283761 142663..143685 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: dvl:Dvul_2662 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 143685 7283761 Ddes_0109 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent epimerase/dehydratase YP_002478707.1 142663 D 525146 CDS YP_002478708.1 220903396 7283762 complement(143616..144128) 1 NC_011883.1 KEGG: similar to CREB-regulated transcription coactivator 1 (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) (Mucoepidermoid carcinoma translocated protein 1); hypothetical protein 144128 7283762 Ddes_0110 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478708.1 143616 R 525146 CDS YP_002478709.1 220903397 7283763 144617..144919 1 NC_011883.1 hypothetical protein 144919 7283763 Ddes_0111 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478709.1 144617 D 525146 CDS YP_002478710.1 220903398 7283764 144921..146207 1 NC_011883.1 PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: chy:CHY_2391 glycine reductase proprotein GrdE; Sarcosine reductase 146207 7283764 Ddes_0112 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Sarcosine reductase YP_002478710.1 144921 D 525146 CDS YP_002478711.1 220903399 7283765 146239..147543 1 NC_011883.1 KEGG: aoe:Clos_0958 selenoprotein B; Contains selenocysteine; TIGRFAM: glycine reductase, selenoprotein B; selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Selenoprotein B glycine/betaine/sarcosine/D-proline reductase; glycine/betaine/sarcosine/D-proline reductase family selenoprotein B 147543 7283765 Ddes_0113 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine/betaine/sarcosine/D-proline reductase family selenoprotein B YP_002478711.1 146239 D 525146 CDS YP_002478712.1 220903400 7283766 147790..148704 1 NC_011883.1 KEGG: pth:PTH_1417 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; thioredoxin reductase 148704 7283766 Ddes_0114 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thioredoxin reductase YP_002478712.1 147790 D 525146 CDS YP_002478713.1 220903401 7283767 148840..150375 1 NC_011883.1 KEGG: chy:CHY_2394 glycine reductase complex, protein C; betaine reductase 150375 7283767 Ddes_0115 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 betaine reductase YP_002478713.1 148840 D 525146 CDS YP_002478714.1 220903402 7283768 150386..151552 1 NC_011883.1 PFAM: fatty acid synthesis plsX protein; KEGG: cpo:COPRO5265_0228 fatty acid/phospholipid synthesis protein PlsX; glycine reductase 151552 7283768 Ddes_0116 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine reductase YP_002478714.1 150386 D 525146 CDS YP_002478715.1 220903403 7283769 151657..151974 1 NC_011883.1 PFAM: Thioredoxin domain; KEGG: sth:STH2871 thioredoxin; thioredoxin domain-containing protein 151974 7283769 Ddes_0117 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thioredoxin domain-containing protein YP_002478715.1 151657 D 525146 CDS YP_002478716.1 220903404 7283770 152085..152561 1 NC_011883.1 GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin; glycine/sarcosine/betaine reductase complex protein A 152561 7283770 Ddes_0118 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine/sarcosine/betaine reductase complex protein A YP_002478716.1 152085 D 525146 CDS YP_002478717.1 220903405 7283771 153006..154763 1 NC_011883.1 PFAM: chemotaxis sensory transducer; KEGG: dvl:Dvul_0942 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 154763 7283771 Ddes_0119 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002478717.1 153006 D 525146 CDS YP_002478718.1 220903406 7283772 155018..156361 1 NC_011883.1 KEGG: csa:Csal_0252 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 156361 7283772 Ddes_0120 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 deoxyguanosinetriphosphate triphosphohydrolase YP_002478718.1 155018 D 525146 CDS YP_002478719.1 220903407 7283773 156445..156714 1 NC_011883.1 hypothetical protein 156714 7283773 Ddes_0121 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478719.1 156445 D 525146 CDS YP_002478720.1 220903408 7283774 complement(156734..157333) 1 NC_011883.1 KEGG: afu:AF0288 adenylylsulfate kinase; adenylylsulfate kinase-like protein 157333 7283774 Ddes_0122 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylylsulfate kinase-like protein YP_002478720.1 156734 R 525146 CDS YP_002478721.1 220903409 7283777 158014..159072 1 NC_011883.1 PFAM: polysaccharide deacetylase; KEGG: dvl:Dvul_2705 polysaccharide deacetylase; polysaccharide deacetylase 159072 7283777 Ddes_0123 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polysaccharide deacetylase YP_002478721.1 158014 D 525146 CDS YP_002478722.1 220903410 7283778 complement(159509..160729) 1 NC_011883.1 TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dvu:DVU0419 carboxynorspermidine decarboxylase; carboxynorspermidine decarboxylase 160729 7283778 Ddes_0124 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carboxynorspermidine decarboxylase YP_002478722.1 159509 R 525146 CDS YP_002478723.1 220903411 7283779 complement(161550..162761) 1 NC_011883.1 PFAM: Saccharopine dehydrogenase; KEGG: dvl:Dvul_2516 saccharopine dehydrogenase; saccharopine dehydrogenase 162761 7283779 Ddes_0125 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 saccharopine dehydrogenase YP_002478723.1 161550 R 525146 CDS YP_002478724.1 220903412 7283780 complement(162945..164366) 1 NC_011883.1 PFAM: histone deacetylase superfamily; KEGG: dvl:Dvul_1093 histone deacetylase superfamily protein; histone deacetylase superfamily protein 164366 7283780 Ddes_0126 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histone deacetylase superfamily protein YP_002478724.1 162945 R 525146 CDS YP_002478725.1 220903413 7283781 complement(164359..164700) 1 NC_011883.1 hypothetical protein 164700 7283781 Ddes_0127 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478725.1 164359 R 525146 CDS YP_002478726.1 220903414 7283782 complement(164931..165584) 1 NC_011883.1 PFAM: thymidylate kinase; KEGG: dvu:DVU2140 thymidylate kinase; dTMP kinase 165584 7283782 Ddes_0128 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dTMP kinase YP_002478726.1 164931 R 525146 CDS YP_002478727.1 220903415 7283783 complement(165560..166591) 1 NC_011883.1 KEGG: dvl:Dvul_1091 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 166591 7283783 Ddes_0129 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002478727.1 165560 R 525146 CDS YP_002478728.1 220903416 7283784 166710..167483 1 NC_011883.1 KEGG: dvl:Dvul_1090 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 167483 7283784 Ddes_0130 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 stationary-phase survival protein SurE YP_002478728.1 166710 D 525146 CDS YP_002478729.1 220903417 7283785 167914..168840 1 NC_011883.1 KEGG: dvl:Dvul_1089 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II; fructose-1,6-bisphosphate aldolase 168840 7283785 Ddes_0131 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 fructose-1,6-bisphosphate aldolase YP_002478729.1 167914 D 525146 CDS YP_002478730.1 220903418 7283786 168871..169875 1 NC_011883.1 KEGG: dvl:Dvul_1088 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 169875 7283786 Ddes_0132 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glyceraldehyde-3-phosphate dehydrogenase, type I YP_002478730.1 168871 D 525146 CDS YP_002478731.1 220903419 7283787 complement(170136..171086) 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: lip:LI0081 nucleoside-diphosphate sugar epimerase; hypothetical protein 171086 7283787 Ddes_0133 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478731.1 170136 R 525146 CDS YP_002478732.1 220903420 7283788 complement(171294..173720) 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvu:DVU1975 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 173720 7283788 Ddes_0134 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002478732.1 171294 R 525146 CDS YP_002478733.1 220903421 7283789 complement(174349..174888) 1 NC_011883.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: lip:LI0792 ferredoxin oxidoreductases, gamma subunit; pyruvate ferredoxin/flavodoxin oxidoreductase 174888 7283789 Ddes_0135 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002478733.1 174349 R 525146 CDS YP_002478734.1 220903422 7283790 complement(174881..175732) 1 NC_011883.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: lip:LI0791 ferredoxin oxidoreductases, beta subunit; thiamine pyrophosphate domain-containing TPP-binding protein 175732 7283790 Ddes_0136 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine pyrophosphate domain-containing TPP-binding protein YP_002478734.1 174881 R 525146 CDS YP_002478735.1 220903423 7283791 complement(175735..176844) 1 NC_011883.1 catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase 176844 7283791 Ddes_0137 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-ketoisovalerate ferredoxin reductase YP_002478735.1 175735 R 525146 CDS YP_002478736.1 220903424 7283792 complement(176841..177065) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0044 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 177065 7283792 Ddes_0138 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002478736.1 176841 R 525146 CDS YP_002478737.1 220903425 7283793 complement(177275..178372) 1 NC_011883.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 178372 queA 7283793 queA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_002478737.1 177275 R 525146 CDS YP_002478738.1 220903426 7283794 178503..179102 1 NC_011883.1 KEGG: dvl:Dvul_0042 putative lipoprotein; hypothetical protein 179102 7283794 Ddes_0140 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478738.1 178503 D 525146 CDS YP_002478739.1 220903427 7283795 179099..180352 1 NC_011883.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: dvl:Dvul_0041 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 180352 7283795 Ddes_0141 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_002478739.1 179099 D 525146 CDS YP_002478740.1 220903428 7283796 180334..181278 1 NC_011883.1 KEGG: dvl:Dvul_0040 hypothetical protein; hypothetical protein 181278 7283796 Ddes_0142 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478740.1 180334 D 525146 CDS YP_002478741.1 220903429 7283797 181754..182137 1 NC_011883.1 KEGG: bth:BT_2176 hypothetical protein; hypothetical protein 182137 7283797 Ddes_0143 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478741.1 181754 D 525146 CDS YP_002478742.1 220903430 7283798 182134..182733 1 NC_011883.1 PFAM: protein of unknown function DUF340 membrane; KEGG: bvu:BVU_1366 hypothetical protein; hypothetical protein 182733 7283798 Ddes_0144 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478742.1 182134 D 525146 CDS YP_002478743.1 220903431 7283799 182970..183662 1 NC_011883.1 KEGG: dvl:Dvul_2682 hypothetical protein; hypothetical protein 183662 7283799 Ddes_0145 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478743.1 182970 D 525146 CDS YP_002478744.1 220903432 7283800 complement(183917..185194) 1 NC_011883.1 KEGG: gsu:GSU1966 hypothetical protein; hypothetical protein 185194 7283800 Ddes_0146 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478744.1 183917 R 525146 CDS YP_002478745.1 220903433 7283801 complement(185856..186821) 1 NC_011883.1 PFAM: response regulator receiver; CheW domain protein; KEGG: lip:LI1117 chemotaxis signal transduction protein; response regulator receiver modulated CheW protein 186821 7283801 Ddes_0147 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver modulated CheW protein YP_002478745.1 185856 R 525146 CDS YP_002478746.1 220903434 7283802 complement(186957..187091) 1 NC_011883.1 hypothetical protein 187091 7283802 Ddes_0148 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478746.1 186957 R 525146 CDS YP_002478747.1 220903435 7283803 complement(187216..188136) 1 NC_011883.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dvl:Dvul_2297 cysteine synthases; cysteine synthase 188136 7283803 Ddes_0149 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cysteine synthase YP_002478747.1 187216 R 525146 CDS YP_002478748.1 220903436 7283804 188356..188817 1 NC_011883.1 KEGG: ppd:Ppro_0148 hypothetical protein; hypothetical protein 188817 7283804 Ddes_0150 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478748.1 188356 D 525146 CDS YP_002478749.1 220903437 7283805 complement(189130..190533) 1 NC_011883.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dps:DP0303 dihydrolipoamide dehydrogenase, E3 component; dihydrolipoamide dehydrogenase 190533 7283805 Ddes_0151 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydrolipoamide dehydrogenase YP_002478749.1 189130 R 525146 CDS YP_002478750.1 220903438 7283806 complement(190703..191095) 1 NC_011883.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: nph:NP4772A glycin cleavage system H protein; glycine cleavage system H protein 191095 7283806 Ddes_0152 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine cleavage system H protein YP_002478750.1 190703 R 525146 CDS YP_002478751.1 220903439 7283807 complement(191290..191751) 1 NC_011883.1 PFAM: OsmC family protein; KEGG: drm:Dred_2833 OsmC family protein; OsmC family protein 191751 7283807 Ddes_0153 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 OsmC family protein YP_002478751.1 191290 R 525146 CDS YP_002478752.1 220903440 7283808 complement(191764..193359) 1 NC_011883.1 PFAM: Na+/solute symporter; KEGG: drm:Dred_2834 Na+/solute symporter; Na+/solute symporter 193359 7283808 Ddes_0154 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Na+/solute symporter YP_002478752.1 191764 R 525146 CDS YP_002478753.1 220903441 7283809 complement(193883..195607) 1 NC_011883.1 PFAM: CBS domain containing protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: drm:Dred_2835 putative PAS/PAC sensor protein; Fis family sigma-54 specific transcriptional regulator 195607 7283809 Ddes_0155 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family sigma-54 specific transcriptional regulator YP_002478753.1 193883 R 525146 CDS YP_002478754.1 220903442 7283810 complement(196044..197060) 1 NC_011883.1 KEGG: dvl:Dvul_2386 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 197060 7283810 Ddes_0156 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glyceraldehyde-3-phosphate dehydrogenase, type I YP_002478754.1 196044 R 525146 CDS YP_002478755.1 220903443 7283811 197096..197215 1 NC_011883.1 hypothetical protein 197215 7283811 Ddes_0157 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478755.1 197096 D 525146 CDS YP_002478756.1 220903444 7283812 complement(197234..197788) 1 NC_011883.1 PFAM: GAF domain protein; KEGG: dvl:Dvul_2385 putative GAF sensor protein; putative phytochrome sensor protein 197788 7283812 Ddes_0158 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative phytochrome sensor protein YP_002478756.1 197234 R 525146 CDS YP_002478757.1 220903445 7283813 complement(197973..198314) 1 NC_011883.1 PFAM: protein of unknown function DUF583; KEGG: dvl:Dvul_2189 hypothetical protein; hypothetical protein 198314 7283813 Ddes_0159 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478757.1 197973 R 525146 CDS YP_002478758.1 220903446 7283814 complement(198340..199446) 1 NC_011883.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: dvl:Dvul_2188 rod shape-determining protein RodA; rod shape-determining protein RodA 199446 7283814 Ddes_0160 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rod shape-determining protein RodA YP_002478758.1 198340 R 525146 CDS YP_002478759.1 220903447 7283815 complement(199816..201738) 1 NC_011883.1 KEGG: dvu:DVU0786 penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 201738 7283815 Ddes_0161 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 penicillin-binding protein 2 YP_002478759.1 199816 R 525146 CDS YP_002478760.1 220903448 7283816 complement(201722..202192) 1 NC_011883.1 KEGG: dvl:Dvul_2186 hypothetical protein; hypothetical protein 202192 7283816 Ddes_0162 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478760.1 201722 R 525146 CDS YP_002478761.1 220903449 7283817 complement(202189..203079) 1 NC_011883.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 203079 7283817 Ddes_0163 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rod shape-determining protein MreC YP_002478761.1 202189 R 525146 CDS YP_002478762.1 220903450 7283818 complement(203485..204525) 1 NC_011883.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 204525 7283818 Ddes_0164 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rod shape-determining protein MreB YP_002478762.1 203485 R 525146 CDS YP_002478763.1 220903451 7283819 204767..205810 1 NC_011883.1 KEGG: dvl:Dvul_2183 putative radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 205810 7283819 Ddes_0165 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478763.1 204767 D 525146 CDS YP_002478764.1 220903452 7283820 complement(205832..207637) 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: dvl:Dvul_0339 methyl-accepting chemotaxis sensory transducer; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 207637 7283820 Ddes_0166 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cache sensor-containing methyl-accepting chemotaxis sensory transducer YP_002478764.1 205832 R 525146 CDS YP_002478765.1 220903453 7283821 complement(208332..209456) 1 NC_011883.1 PFAM: integrase family protein; TOBE domain protein; KEGG: dvl:Dvul_2790 TOBE domain-containing protein; TOBE domain-containing protein 209456 7283821 Ddes_0167 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TOBE domain-containing protein YP_002478765.1 208332 R 525146 CDS YP_002478766.1 220903454 7283822 209612..210364 1 NC_011883.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dvu:DVU0177 molybdenum ABC transporter, periplasmic molybdenum-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 210364 7283822 Ddes_0168 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdenum ABC transporter periplasmic molybdate-binding protein YP_002478766.1 209612 D 525146 CDS YP_002478767.1 220903455 7283823 210553..211233 1 NC_011883.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2788 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 211233 7283823 Ddes_0169 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdate ABC transporter inner membrane subunit YP_002478767.1 210553 D 525146 CDS YP_002478768.1 220903456 7283824 211230..212006 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2789 ABC transporter related; ABC transporter-like protein 212006 7283824 Ddes_0170 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002478768.1 211230 D 525146 CDS YP_002478769.1 220903457 7283825 213021..214136 1 NC_011883.1 KEGG: mta:Moth_2167 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 214136 7283825 Ddes_0171 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alanine racemase YP_002478769.1 213021 D 525146 CDS YP_002478770.1 220903458 7283826 214362..215768 1 NC_011883.1 PFAM: amino acid permease-associated region; KEGG: btl:BALH_0632 amino acid permease, proline-specific permease; amino acid permease-associated protein 215768 7283826 Ddes_0172 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid permease-associated protein YP_002478770.1 214362 D 525146 CDS YP_002478771.1 220903459 7283827 215970..217142 1 NC_011883.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pgn:PGN_1120 putative NADPH-NAD transhydrogenase; NAD(P)(+) transhydrogenase 217142 7283827 Ddes_0173 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD(P)(+) transhydrogenase YP_002478771.1 215970 D 525146 CDS YP_002478772.1 220903460 7283828 217227..217508 1 NC_011883.1 KEGG: pgn:PGN_1121 probable NADPH-NAD transhydrogenase alpha subunit; putative NADPH-NAD transhydrogenase alpha subunit 217508 7283828 Ddes_0174 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative NADPH-NAD transhydrogenase alpha subunit YP_002478772.1 217227 D 525146 CDS YP_002478773.1 220903461 7283829 217562..220606 1 NC_011883.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pgn:PGN_1122 NADPH-NAD transhydrogenase beta subunit; NAD(P)(+) transhydrogenase 220606 7283829 Ddes_0175 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD(P)(+) transhydrogenase YP_002478773.1 217562 D 525146 CDS YP_002478774.1 220903462 7283832 complement(222806..224845) 1 NC_011883.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 224845 7283832 Ddes_0178 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Sel1 domain-containing protein YP_002478774.1 222806 R 525146 CDS YP_002478775.1 220903463 7283833 complement(225292..226527) 1 NC_011883.1 KEGG: bbt:BBta_5626 hydrolase domain-containing protein; hypothetical protein 226527 7283833 Ddes_0179 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478775.1 225292 R 525146 CDS YP_002478776.1 220903464 7283834 complement(226543..228207) 1 NC_011883.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: gvi:gll0947 alginate O-acetylation protein; membrane bound O-acyl transferase MBOAT family protein 228207 7283834 Ddes_0180 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 membrane bound O-acyl transferase MBOAT family protein YP_002478776.1 226543 R 525146 CDS YP_002478777.1 220903465 7283835 complement(228424..228711) 1 NC_011883.1 PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_2538 histone family protein DNA-binding protein; histone family protein DNA-binding protein 228711 7283835 Ddes_0181 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histone family protein DNA-binding protein YP_002478777.1 228424 R 525146 CDS YP_002478778.1 220903466 7283836 228936..230141 1 NC_011883.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: lip:LI0429 coproporphyrinogen III oxidase-like protein; radical SAM protein 230141 7283836 Ddes_0182 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002478778.1 228936 D 525146 CDS YP_002478779.1 220903467 7283837 230563..232653 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_2346 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 232653 7283837 Ddes_0183 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002478779.1 230563 D 525146 CDS YP_002478780.1 220903468 7283838 233201..233575 1 NC_011883.1 hypothetical protein 233575 7283838 Ddes_0184 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478780.1 233201 D 525146 CDS YP_002478781.1 220903469 7283839 complement(233951..234406) 1 NC_011883.1 KEGG: dvl:Dvul_0015 zinc resistance-associated protein; hypothetical protein 234406 7283839 Ddes_0185 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478781.1 233951 R 525146 CDS YP_002478782.1 220903470 7283840 234547..236112 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0016 signal transduction histidine kinase, nitrogen specific, NtrB; sensor protein ZraS 236112 7283840 Ddes_0186 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sensor protein ZraS YP_002478782.1 234547 D 525146 CDS YP_002478783.1 220903471 7283841 236171..237544 1 NC_011883.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_0017 two component, sigma54 specific, Fis family transcriptional regulator; Fis family two component sigma-54 specific transcriptional regulator 237544 7283841 Ddes_0187 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family two component sigma-54 specific transcriptional regulator YP_002478783.1 236171 D 525146 CDS YP_002478784.1 220903472 7283842 237768..238373 1 NC_011883.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_0799 metal dependent phosphohydrolase; metal dependent phosphohydrolase 238373 7283842 Ddes_0188 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002478784.1 237768 D 525146 CDS YP_002478785.1 220903473 7283843 238508..239965 1 NC_011883.1 PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cpy:Cphy_2835 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 239965 7283843 Ddes_0189 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase/phosphodiesterase YP_002478785.1 238508 D 525146 CDS YP_002478786.1 220903474 7283844 complement(240081..240863) 1 NC_011883.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: predicted protein; K00930 acetylglutamate kinase; acetylglutamate kinase 240863 7283844 Ddes_0190 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetylglutamate kinase YP_002478786.1 240081 R 525146 CDS YP_002478787.1 220903475 7283845 241110..243110 1 NC_011883.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_1726 multi-sensor hybrid histidine kinase; histidine kinase 243110 7283845 Ddes_0191 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine kinase YP_002478787.1 241110 D 525146 CDS YP_002478788.1 220903476 7283846 243345..244736 1 NC_011883.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 244736 gltX 7283846 gltX Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamyl-tRNA synthetase YP_002478788.1 243345 D 525146 CDS YP_002478789.1 220903477 7283847 complement(244998..245789) 1 NC_011883.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: lip:LI0532 flagellar biosynthesis pathway, component FliR; flagellar biosynthetic protein FliR 245789 7283847 Ddes_0193 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar biosynthetic protein FliR YP_002478789.1 244998 R 525146 CDS YP_002478790.1 220903478 7283848 complement(245911..247482) 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2158 major facilitator superfamily MFS_1; major facilitator superfamily protein 247482 7283848 Ddes_0194 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002478790.1 245911 R 525146 CDS YP_002478791.1 220903479 7283851 complement(248585..249625) 1 NC_011883.1 PFAM: response regulator receiver; CheW domain protein; KEGG: dvl:Dvul_1997 putative CheW protein; response regulator receiver modulated CheW protein 249625 7283851 Ddes_0197 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver modulated CheW protein YP_002478791.1 248585 R 525146 CDS YP_002478792.1 220903480 7283852 complement(249832..250518) 1 NC_011883.1 KEGG: dvl:Dvul_1999 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; Endonuclease III/Nth; SMART: iron-sulfur cluster loop; endonuclease III 250518 7283852 Ddes_0198 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 endonuclease III YP_002478792.1 249832 R 525146 CDS YP_002478793.1 220903481 7283853 250642..250965 1 NC_011883.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: afw:Anae109_1180 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 250965 7283853 Ddes_0199 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CutA1 divalent ion tolerance protein YP_002478793.1 250642 D 525146 CDS YP_002478794.1 220903482 7283854 251096..252052 1 NC_011883.1 PFAM: PfkB domain protein; KEGG: dvl:Dvul_2001 ribokinase-like domain-containing protein; PfkB domain-containing protein 252052 7283854 Ddes_0200 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PfkB domain-containing protein YP_002478794.1 251096 D 525146 CDS YP_002478795.1 220903483 7283855 252186..252638 1 NC_011883.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_2338 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 252638 7283855 Ddes_0201 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Glyoxalase/bleomycin resistance protein/dioxygenase YP_002478795.1 252186 D 525146 CDS YP_002478796.1 220903484 7283856 252951..253379 1 NC_011883.1 PFAM: protein of unknown function DUF606; KEGG: gme:Gmet_2636 hypothetical protein; hypothetical protein 253379 7283856 Ddes_0202 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478796.1 252951 D 525146 CDS YP_002478797.1 220903485 7283857 253494..253967 1 NC_011883.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: dvl:Dvul_0019 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 253967 7283857 Ddes_0203 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_002478797.1 253494 D 525146 CDS YP_002478798.1 220903486 7283858 complement(254051..254338) 1 NC_011883.1 PFAM: protein of unknown function DUF134; KEGG: dsy:DSY3441 hypothetical protein; hypothetical protein 254338 7283858 Ddes_0204 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478798.1 254051 R 525146 CDS YP_002478799.1 220903487 7283859 complement(254740..255009) 1 NC_011883.1 KEGG: dol:Dole_0573 hypothetical protein; hypothetical protein 255009 7283859 Ddes_0205 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478799.1 254740 R 525146 CDS YP_002478800.1 220903488 7283860 complement(255653..256000) 1 NC_011883.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: trq:TRQ2_1532 cupin 2 domain-containing protein; cupin 256000 7283860 Ddes_0206 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cupin YP_002478800.1 255653 R 525146 CDS YP_002478801.1 220903489 7283861 complement(256098..259043) 1 NC_011883.1 PFAM: MscS Mechanosensitive ion channel; KEGG: dvu:DVU1544 mechanosensitive ion channel family protein; mechanosensitive ion channel MscS 259043 7283861 Ddes_0207 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 mechanosensitive ion channel MscS YP_002478801.1 256098 R 525146 CDS YP_002478802.1 220903490 7283862 259223..260269 1 NC_011883.1 PFAM: protein of unknown function DUF362; KEGG: dvu:DVU3036 hypothetical protein; hypothetical protein 260269 7283862 Ddes_0208 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478802.1 259223 D 525146 CDS YP_002478803.1 220903491 7283863 260281..260916 1 NC_011883.1 KEGG: dvl:Dvul_1139 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 260916 7283863 Ddes_0209 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine-phosphate pyrophosphorylase YP_002478803.1 260281 D 525146 CDS YP_002478804.1 220903492 7283864 complement(261062..261979) 1 NC_011883.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcj:BCAL1417 LysR family regulatory protein; LysR family transcriptional regulator 261979 7283864 Ddes_0210 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 LysR family transcriptional regulator YP_002478804.1 261062 R 525146 CDS YP_002478805.1 220903493 7283865 262112..262501 1 NC_011883.1 PFAM: LrgA family protein; KEGG: dsy:DSY3772 hypothetical protein; LrgA family protein 262501 7283865 Ddes_0211 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 LrgA family protein YP_002478805.1 262112 D 525146 CDS YP_002478806.1 220903494 7283866 262486..263199 1 NC_011883.1 PFAM: LrgB family protein; KEGG: gbm:Gbem_2907 LrgB family protein; LrgB family protein 263199 7283866 Ddes_0212 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 LrgB family protein YP_002478806.1 262486 D 525146 CDS YP_002478807.1 220903495 7283868 264835..266007 1 NC_011883.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pgn:PGN_1120 putative NADPH-NAD transhydrogenase; NAD(P)(+) transhydrogenase 266007 7283868 Ddes_0214 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD(P)(+) transhydrogenase YP_002478807.1 264835 D 525146 CDS YP_002478808.1 220903496 7283869 266092..266373 1 NC_011883.1 KEGG: pgn:PGN_1121 probable NADPH-NAD transhydrogenase alpha subunit; putative NADPH-NAD transhydrogenase alpha subunit 266373 7283869 Ddes_0215 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative NADPH-NAD transhydrogenase alpha subunit YP_002478808.1 266092 D 525146 CDS YP_002478809.1 220903497 7283870 266427..268928 1 NC_011883.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pgn:PGN_1122 NADPH-NAD transhydrogenase beta subunit; NAD(P)(+) transhydrogenase 268928 7283870 Ddes_0216 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD(P)(+) transhydrogenase YP_002478809.1 266427 D 525146 CDS YP_002478810.1 220903498 7283871 268934..269539 1 NC_011883.1 hypothetical protein 269539 7283871 Ddes_0217 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478810.1 268934 D 525146 CDS YP_002478811.1 220903499 7283872 269497..270855 1 NC_011883.1 PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; class III aminotransferase 270855 7283872 Ddes_0218 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 class III aminotransferase YP_002478811.1 269497 D 525146 CDS YP_002478812.1 220903500 7283873 complement(271014..272831) 1 NC_011883.1 KEGG: dps:DP0355 transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; Fis family PAS modulated sigma54 specific transcriptional regulator 272831 7283873 Ddes_0219 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family PAS modulated sigma54 specific transcriptional regulator YP_002478812.1 271014 R 525146 CDS YP_002478813.1 220903501 7283874 273168..274910 1 NC_011883.1 catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; sulfoacetaldehyde acetyltransferase 274910 7283874 Ddes_0220 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfoacetaldehyde acetyltransferase YP_002478813.1 273168 D 525146 CDS YP_002478814.1 220903502 7283875 275079..276551 1 NC_011883.1 PFAM: amino acid permease-associated region; KEGG: dps:DP0547 amino acid transporter; amino acid permease-associated protein 276551 7283875 Ddes_0221 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid permease-associated protein YP_002478814.1 275079 D 525146 CDS YP_002478815.1 220903503 7283876 complement(277508..278539) 1 NC_011883.1 PFAM: integrase family protein; KEGG: dvl:Dvul_1487 phage integrase family protein; integrase family protein 278539 7283876 Ddes_0222 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase family protein YP_002478815.1 277508 R 525146 CDS YP_002478816.1 220903504 7283877 complement(278544..278927) 1 NC_011883.1 hypothetical protein 278927 7283877 Ddes_0223 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478816.1 278544 R 525146 CDS YP_002478817.1 220903505 7283878 279047..279469 1 NC_011883.1 hypothetical protein 279469 7283878 Ddes_0224 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478817.1 279047 D 525146 CDS YP_002478818.1 220903506 7283879 279541..280083 1 NC_011883.1 PFAM: BRO domain protein; KEGG: ppw:PputW619_1315 prophage antirepressor; prophage antirepressor 280083 7283879 Ddes_0225 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 prophage antirepressor YP_002478818.1 279541 D 525146 CDS YP_002478819.1 220903507 7283880 280583..280843 1 NC_011883.1 PFAM: protein of unknown function DUF497; KEGG: gur:Gura_0581 hypothetical protein; hypothetical protein 280843 7283880 Ddes_0226 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478819.1 280583 D 525146 CDS YP_002478820.1 220903508 7283881 280833..281087 1 NC_011883.1 KEGG: dvl:Dvul_1495 CopG family protein; hypothetical protein 281087 7283881 Ddes_0227 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478820.1 280833 D 525146 CDS YP_002478821.1 220903509 7283882 281236..281439 1 NC_011883.1 PFAM: protein of unknown function DUF37; KEGG: ilo:IL2081 alpha-hemolysin family protein; hypothetical protein 281439 7283882 Ddes_0228 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478821.1 281236 D 525146 CDS YP_002478822.1 220903510 7283883 281464..281712 1 NC_011883.1 KEGG: ypi:YpsIP31758_1761 hypothetical protein; hypothetical protein 281712 7283883 Ddes_0229 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478822.1 281464 D 525146 CDS YP_002478823.1 220903511 7283884 281725..282606 1 NC_011883.1 KEGG: ava:Ava_0171 hypothetical protein; hypothetical protein 282606 7283884 Ddes_0230 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478823.1 281725 D 525146 CDS YP_002478824.1 220903512 7283885 282615..283364 1 NC_011883.1 PFAM: Gp37Gp68 family protein; KEGG: rca:Rcas_0327 Gp37Gp68 family protein; Gp37Gp68 family protein 283364 7283885 Ddes_0231 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gp37Gp68 family protein YP_002478824.1 282615 D 525146 CDS YP_002478825.1 220903513 7283886 complement(283391..283552) 1 NC_011883.1 hypothetical protein 283552 7283886 Ddes_0232 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478825.1 283391 R 525146 CDS YP_002478826.1 220903514 7283887 complement(283688..283942) 1 NC_011883.1 KEGG: esa:ESA_00350 hypothetical protein; hypothetical protein 283942 7283887 Ddes_0233 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478826.1 283688 R 525146 CDS YP_002478827.1 220903515 7283888 284293..284514 1 NC_011883.1 hypothetical protein 284514 7283888 Ddes_0234 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478827.1 284293 D 525146 CDS YP_002478828.1 220903516 7283889 284511..284972 1 NC_011883.1 hypothetical protein 284972 7283889 Ddes_0235 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478828.1 284511 D 525146 CDS YP_002478829.1 220903517 7283890 complement(285017..285397) 1 NC_011883.1 KEGG: mmw:Mmwyl1_0594 hypothetical protein; hypothetical protein 285397 7283890 Ddes_0236 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478829.1 285017 R 525146 CDS YP_002478830.1 220903518 7283891 complement(285407..285649) 1 NC_011883.1 PFAM: transcriptional activator Ogr/delta; KEGG: dvl:Dvul_2769 phage transcriptional activator, Ogr/delta; transcriptional activator Ogr/delta 285649 7283891 Ddes_0237 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transcriptional activator Ogr/delta YP_002478830.1 285407 R 525146 CDS YP_002478831.1 220903519 7283892 complement(285696..286730) 1 NC_011883.1 TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: dvl:Dvul_2768 PBSX family phage portal protein; phage portal protein, PBSX family 286730 7283892 Ddes_0238 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage portal protein, PBSX family YP_002478831.1 285696 R 525146 CDS YP_002478832.1 220903520 7283893 complement(286741..288588) 1 NC_011883.1 PFAM: protein of unknown function DUF264; putative terminase ATPase subunit; KEGG: dvl:Dvul_1472 hypothetical protein; hypothetical protein 288588 7283893 Ddes_0239 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478832.1 286741 R 525146 CDS YP_002478833.1 220903521 7283894 288701..289531 1 NC_011883.1 PFAM: capsid scaffolding; KEGG: dvl:Dvul_1471 phage capsid scaffolding; capsid scaffolding 289531 7283894 Ddes_0240 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 capsid scaffolding YP_002478833.1 288701 D 525146 CDS YP_002478834.1 220903522 7283895 289565..290599 1 NC_011883.1 TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; KEGG: dvl:Dvul_2765 P2 family phage major capsid protein; phage major capsid protein, P2 family 290599 7283895 Ddes_0241 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage major capsid protein, P2 family YP_002478834.1 289565 D 525146 CDS YP_002478835.1 220903523 7283896 290599..291348 1 NC_011883.1 PFAM: small terminase subunit; KEGG: dvl:Dvul_2764 phage small terminase subunit; small terminase subunit 291348 7283896 Ddes_0242 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small terminase subunit YP_002478835.1 290599 D 525146 CDS YP_002478836.1 220903524 7283897 291453..291920 1 NC_011883.1 PFAM: head completion protein; KEGG: dvl:Dvul_2763 prophage PSPPH06, putative head completion/stabilization protein; head completion protein 291920 7283897 Ddes_0243 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 head completion protein YP_002478836.1 291453 D 525146 CDS YP_002478837.1 220903525 7283898 291920..292444 1 NC_011883.1 KEGG: dvl:Dvul_2762 hypothetical protein; hypothetical protein 292444 7283898 Ddes_0244 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478837.1 291920 D 525146 CDS YP_002478838.1 220903526 7283899 292441..293124 1 NC_011883.1 KEGG: dvl:Dvul_2761 phage virion morphogenesis protein; phage virion morphogenesis protein 293124 7283899 Ddes_0245 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage virion morphogenesis protein YP_002478838.1 292441 D 525146 CDS YP_002478839.1 220903527 7283900 293136..294245 1 NC_011883.1 KEGG: dvl:Dvul_2760 hypothetical protein; hypothetical protein 294245 7283900 Ddes_0246 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478839.1 293136 D 525146 CDS YP_002478840.1 220903528 7283901 294255..294725 1 NC_011883.1 KEGG: dvl:Dvul_2759 prophage PSPPH06, putative tail tube protein; prophage PSPPH06 tail tube protein 294725 7283901 Ddes_0247 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 prophage PSPPH06 tail tube protein YP_002478840.1 294255 D 525146 CDS YP_002478841.1 220903529 7283902 294737..295120 1 NC_011883.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rsh:Rsph17029_1851 peptidase M15A; peptidase M15A 295120 7283902 Ddes_0248 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M15A YP_002478841.1 294737 D 525146 CDS YP_002478842.1 220903530 7283903 295402..295674 1 NC_011883.1 KEGG: asa:ASA_1577 phage protein; phage protein 295674 7283903 Ddes_0249 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage protein YP_002478842.1 295402 D 525146 CDS YP_002478843.1 220903531 7283904 295674..296006 1 NC_011883.1 hypothetical protein 296006 7283904 Ddes_0250 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478843.1 295674 D 525146 CDS YP_002478844.1 220903532 7283905 296009..296269 1 NC_011883.1 KEGG: asa:ASA_3839 phage protein; phage protein 296269 7283905 Ddes_0251 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage protein YP_002478844.1 296009 D 525146 CDS YP_002478845.1 220903533 7283906 296302..296454 1 NC_011883.1 KEGG: dvl:Dvul_2753 hypothetical protein; hypothetical protein 296454 7283906 Ddes_0252 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478845.1 296302 D 525146 CDS YP_002478846.1 220903534 7283907 296460..298313 1 NC_011883.1 TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; KEGG: dvl:Dvul_1457 TP901 family phage tail tape measure protein; phage tail tape measure protein, TP901 family 298313 7283907 Ddes_0253 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage tail tape measure protein, TP901 family YP_002478846.1 296460 D 525146 CDS YP_002478847.1 220903535 7283908 298313..298675 1 NC_011883.1 KEGG: dvu:DVU1641 hypothetical protein; hypothetical protein 298675 7283908 Ddes_0254 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478847.1 298313 D 525146 CDS YP_002478848.1 220903536 7283909 298675..299865 1 NC_011883.1 KEGG: dvl:Dvul_1453 uncharacterized phage Mu protein GP47-like protein; phage Mu protein GP47-like protein 299865 7283909 Ddes_0255 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage Mu protein GP47-like protein YP_002478848.1 298675 D 525146 CDS YP_002478849.1 220903537 7283910 299862..300476 1 NC_011883.1 KEGG: dvl:Dvul_1452 hypothetical protein; hypothetical protein 300476 7283910 Ddes_0256 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478849.1 299862 D 525146 CDS YP_002478850.1 220903538 7283911 300473..302302 1 NC_011883.1 KEGG: dvl:Dvul_1451 hypothetical protein; hypothetical protein 302302 7283911 Ddes_0257 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478850.1 300473 D 525146 CDS YP_002478851.1 220903539 7283912 302589..303167 1 NC_011883.1 KEGG: dvu:DVU2731 tail fiber assembly protein, putative; hypothetical protein 303167 7283912 Ddes_0258 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478851.1 302589 D 525146 CDS YP_002478852.1 220903540 7283913 303177..303983 1 NC_011883.1 hypothetical protein 303983 7283913 Ddes_0259 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478852.1 303177 D 525146 CDS YP_002478853.1 220903541 7283914 303980..304954 1 NC_011883.1 KEGG: dvl:Dvul_1449 hypothetical protein; hypothetical protein 304954 7283914 Ddes_0260 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478853.1 303980 D 525146 CDS YP_002478854.1 220903542 7283915 304942..305478 1 NC_011883.1 KEGG: dvl:Dvul_2745 nucleoid DNA-binding protein; nucleoid DNA-binding protein 305478 7283915 Ddes_0261 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nucleoid DNA-binding protein YP_002478854.1 304942 D 525146 CDS YP_002478855.1 220903543 7283916 305475..306176 1 NC_011883.1 KEGG: dvl:Dvul_1447 hypothetical protein; hypothetical protein 306176 7283916 Ddes_0262 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478855.1 305475 D 525146 CDS YP_002478856.1 220903544 7283917 306161..307243 1 NC_011883.1 PFAM: Gp5 domain protein; KEGG: dvl:Dvul_2743 GP5 domain-containing protein; Gp5 domain-containing protein 307243 7283917 Ddes_0263 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Gp5 domain-containing protein YP_002478856.1 306161 D 525146 CDS YP_002478857.1 220903545 7283918 complement(307382..307558) 1 NC_011883.1 hypothetical protein 307558 7283918 Ddes_0264 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478857.1 307382 R 525146 CDS YP_002478858.1 220903546 7283919 complement(307666..307884) 1 NC_011883.1 hypothetical protein 307884 7283919 Ddes_0265 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478858.1 307666 R 525146 CDS YP_002478859.1 220903547 7283920 308230..309276 1 NC_011883.1 KEGG: sml:Smlt2077A hypothetical protein; hypothetical protein 309276 7283920 Ddes_0266 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478859.1 308230 D 525146 CDS YP_002478860.1 220903548 7283922 complement(310156..311919) 1 NC_011883.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 311919 7283922 Ddes_0267 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutaminyl-tRNA synthetase YP_002478860.1 310156 R 525146 CDS YP_002478861.1 220903549 7283924 312579..313205 1 NC_011883.1 KEGG: ecv:APECO1_4218 putative phage integrase; putative phage integrase 313205 7283924 Ddes_0268 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative phage integrase YP_002478861.1 312579 D 525146 CDS YP_002478862.1 220903550 7283925 313363..313686 1 NC_011883.1 KEGG: xfn:XfasM23_2250 putative plasmid conjugal transfer protein; putative plasmid conjugal transfer protein 313686 7283925 Ddes_0269 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative plasmid conjugal transfer protein YP_002478862.1 313363 D 525146 CDS YP_002478863.1 220903551 7283926 313965..314357 1 NC_011883.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: mca:MCA1618 DNA mismatch endonuclease, vsr; DNA mismatch endonuclease Vsr 314357 7283926 Ddes_0270 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA mismatch endonuclease Vsr YP_002478863.1 313965 D 525146 CDS YP_002478864.1 220903552 7283927 314426..315358 1 NC_011883.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ecp:ECP_3766 putative type II 5-cytosoine methyltransferase; DNA-cytosine methyltransferase 315358 7283927 Ddes_0271 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA-cytosine methyltransferase YP_002478864.1 314426 D 525146 CDS YP_002478865.1 220903553 7283928 315355..316281 1 NC_011883.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ecp:ECP_3766 putative type II 5-cytosoine methyltransferase; DNA-cytosine methyltransferase 316281 7283928 Ddes_0272 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA-cytosine methyltransferase YP_002478865.1 315355 D 525146 CDS YP_002478866.1 220903554 7283929 316286..317536 1 NC_011883.1 KEGG: ecp:ECP_3768 hypothetical protein; hypothetical protein 317536 7283929 Ddes_0273 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478866.1 316286 D 525146 CDS YP_002478867.1 220903555 7283930 complement(317570..318358) 1 NC_011883.1 PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit; integrase catalytic subunit 318358 7283930 Ddes_0274 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase catalytic subunit YP_002478867.1 317570 R 525146 CDS YP_002478868.1 220903556 7283931 complement(318415..318681) 1 NC_011883.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA; transposase IS3/IS911 family protein 318681 7283931 Ddes_0275 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transposase IS3/IS911 family protein YP_002478868.1 318415 R 525146 CDS YP_002478869.1 220903557 7283932 320093..329368 1 NC_011883.1 TIGRFAM: outer membrane adhesin like proteiin; KEGG: sdn:Sden_0384 hypothetical protein; outer membrane adhesin-like protein 329368 7283932 Ddes_0276 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane adhesin-like protein YP_002478869.1 320093 D 525146 CDS YP_002478870.1 220903558 7283933 complement(329737..330666) 1 NC_011883.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dth:DICTH_1665 D-3-phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 330666 7283933 Ddes_0277 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_002478870.1 329737 R 525146 CDS YP_002478871.1 220903559 7283934 complement(331171..331356) 1 NC_011883.1 hypothetical protein 331356 7283934 Ddes_0278 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478871.1 331171 R 525146 CDS YP_002478872.1 220903560 7283935 331530..332441 1 NC_011883.1 KEGG: dvu:DVU0662 serine O-acetyltransferase; Serine O-acetyltransferase 332441 7283935 Ddes_0279 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Serine O-acetyltransferase YP_002478872.1 331530 D 525146 CDS YP_002478873.1 220903561 7283936 332434..332589 1 NC_011883.1 hypothetical protein 332589 7283936 Ddes_0280 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478873.1 332434 D 525146 CDS YP_002478874.1 220903562 7283937 333003..334313 1 NC_011883.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: dvl:Dvul_1118 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 334313 7283937 Ddes_0281 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 xanthine/uracil/vitamin C permease YP_002478874.1 333003 D 525146 CDS YP_002478875.1 220903563 7283938 334741..335361 1 NC_011883.1 KEGG: dvl:Dvul_2260 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 335361 7283938 Ddes_0282 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 signal peptidase I YP_002478875.1 334741 D 525146 CDS YP_002478876.1 220903564 7283939 335396..336934 1 NC_011883.1 KEGG: lip:LI0751 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 336934 7283939 Ddes_0283 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Mg chelatase subunit ChlI YP_002478876.1 335396 D 525146 CDS YP_002478877.1 220903565 7283940 complement(337388..338524) 1 NC_011883.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: dvu:DVU2655 D-alanyl-D-alanine carboxypeptidase family protein; serine-type D-Ala-D-Ala carboxypeptidase 338524 7283940 Ddes_0284 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 serine-type D-Ala-D-Ala carboxypeptidase YP_002478877.1 337388 R 525146 CDS YP_002478878.1 220903566 7283941 complement(338817..340970) 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1305 methyl-accepting chemotaxis sensory transducer; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 340970 7283941 Ddes_0285 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cache sensor-containing methyl-accepting chemotaxis sensory transducer YP_002478878.1 338817 R 525146 CDS YP_002478879.1 220903567 7283942 complement(341466..341987) 1 NC_011883.1 KEGG: lip:LI0207 transcriptional regulators; putative AsnC family transcriptional regulator 341987 7283942 Ddes_0286 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative AsnC family transcriptional regulator YP_002478879.1 341466 R 525146 CDS YP_002478880.1 220903568 7283943 complement(341987..343231) 1 NC_011883.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvl:Dvul_2128 radical SAM domain-containing protein; radical SAM protein 343231 7283943 Ddes_0287 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002478880.1 341987 R 525146 CDS YP_002478881.1 220903569 7283944 complement(343244..344230) 1 NC_011883.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 344230 7283944 Ddes_0288 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 delta-aminolevulinic acid dehydratase YP_002478881.1 343244 R 525146 CDS YP_002478882.1 220903570 7283945 complement(344349..345533) 1 NC_011883.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvl:Dvul_2126 radical SAM domain-containing protein; radical SAM protein 345533 7283945 Ddes_0289 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002478882.1 344349 R 525146 CDS YP_002478883.1 220903571 7283946 complement(345544..348222) 1 NC_011883.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 348222 alaS 7283946 alaS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alanyl-tRNA synthetase YP_002478883.1 345544 R 525146 CDS YP_002478884.1 220903572 7283947 complement(348360..349439) 1 NC_011883.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 349439 recA 7283947 recA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 recombinase A YP_002478884.1 348360 R 525146 CDS YP_002478885.1 220903573 7283948 349866..350996 1 NC_011883.1 PFAM: thiamine biosynthesis protein; KEGG: dvu:DVU1091 hypothetical protein; thiamine biosynthesis protein 350996 7283948 Ddes_0292 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine biosynthesis protein YP_002478885.1 349866 D 525146 CDS YP_002478886.1 220903574 7283949 351112..351474 1 NC_011883.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: dvl:Dvul_1083 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 351474 7283949 Ddes_0293 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TraR/DksA family transcriptional regulator YP_002478886.1 351112 D 525146 CDS YP_002478887.1 220903575 7283950 351846..353579 1 NC_011883.1 PFAM: protein of unknown function DUF814; KEGG: dvu:DVU2149 hypothetical protein; hypothetical protein 353579 7283950 Ddes_0294 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478887.1 351846 D 525146 CDS YP_002478888.1 220903576 7283951 complement(353981..355147) 1 NC_011883.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN3859 benzoate membrane transport protein, MFS superfamily; benzoate transporter 355147 7283951 Ddes_0295 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 benzoate transporter YP_002478888.1 353981 R 525146 CDS YP_002478889.1 220903577 7283952 complement(355524..356735) 1 NC_011883.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 356735 7283952 Ddes_0296 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetate kinase YP_002478889.1 355524 R 525146 CDS YP_002478890.1 220903578 7283953 complement(357004..359112) 1 NC_011883.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 359112 7283953 Ddes_0297 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate acetyltransferase YP_002478890.1 357004 R 525146 CDS YP_002478891.1 220903579 7283954 complement(359280..362816) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 362816 7283954 Ddes_0298 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002478891.1 359280 R 525146 CDS YP_002478892.1 220903580 7283955 363273..363386 1 NC_011883.1 hypothetical protein 363386 7283955 Ddes_0299 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478892.1 363273 D 525146 CDS YP_002478893.1 220903581 7283956 363705..365462 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: lip:LI0843 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 365462 7283956 Ddes_0300 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002478893.1 363705 D 525146 CDS YP_002478894.1 220903582 7283957 365738..367945 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: lip:LIC103 methyl-accepting chemotaxis protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 367945 7283957 Ddes_0301 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cache sensor-containing methyl-accepting chemotaxis sensory transducer YP_002478894.1 365738 D 525146 CDS YP_002478895.1 220903583 7283958 complement(368280..368936) 1 NC_011883.1 KEGG: lpf:plpl0013 hypothetical protein; hypothetical protein 368936 7283958 Ddes_0302 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478895.1 368280 R 525146 CDS YP_002478896.1 220903584 7283959 complement(369381..370100) 1 NC_011883.1 KEGG: fal:FRAAL6470 hypothetical protein; hypothetical protein 370100 7283959 Ddes_0303 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478896.1 369381 R 525146 CDS YP_002478897.1 220903585 7283960 370412..372658 1 NC_011883.1 KEGG: dvu:DVU3389 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase I 372658 7283960 Ddes_0304 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA topoisomerase I YP_002478897.1 370412 D 525146 CDS YP_002478898.1 220903586 7283961 372645..373793 1 NC_011883.1 PFAM: protein of unknown function DUF182; KEGG: pth:PTH_0686 xanthine and CO dehydrogenases maturation factor; hypothetical protein 373793 7283961 Ddes_0305 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478898.1 372645 D 525146 CDS YP_002478899.1 220903587 7283962 374054..374692 1 NC_011883.1 hypothetical protein 374692 7283962 Ddes_0306 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478899.1 374054 D 525146 CDS YP_002478900.1 220903588 7283963 374918..376033 1 NC_011883.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: lip:LI0993 multidrug efflux membrane permease; RND family efflux transporter MFP subunit 376033 7283963 Ddes_0307 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RND family efflux transporter MFP subunit YP_002478900.1 374918 D 525146 CDS YP_002478901.1 220903589 7283964 376040..379243 1 NC_011883.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: dvl:Dvul_2900 hydrophobe/amphiphile efflux-1 (HAE1) family protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 379243 7283964 Ddes_0308 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_002478901.1 376040 D 525146 CDS YP_002478902.1 220903590 7283965 379240..380835 1 NC_011883.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: lip:LI0995 outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 380835 7283965 Ddes_0309 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NodT family RND efflux system outer membrane lipoprotein YP_002478902.1 379240 D 525146 CDS YP_002478903.1 220903591 7283966 381117..381764 1 NC_011883.1 hypothetical protein 381764 7283966 Ddes_0310 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478903.1 381117 D 525146 CDS YP_002478904.1 220903592 7283967 382111..383286 1 NC_011883.1 KEGG: dvl:Dvul_0013 hypothetical protein; hypothetical protein 383286 7283967 Ddes_0311 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478904.1 382111 D 525146 CDS YP_002478905.1 220903593 7283968 383301..385025 1 NC_011883.1 PFAM: glycosyl transferase family 9; KEGG: dvl:Dvul_2523 glycosyl transferase family protein; glycosyl transferase family protein 385025 7283968 Ddes_0312 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycosyl transferase family protein YP_002478905.1 383301 D 525146 CDS YP_002478906.1 220903594 7283969 385105..385710 1 NC_011883.1 KEGG: dvl:Dvul_2524 hypothetical protein; hypothetical protein 385710 7283969 Ddes_0313 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478906.1 385105 D 525146 CDS YP_002478907.1 220903595 7283970 385727..386050 1 NC_011883.1 KEGG: lip:LI1016 hypothetical protein; hypothetical protein 386050 7283970 Ddes_0314 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478907.1 385727 D 525146 CDS YP_002478908.1 220903596 7283971 386669..387373 1 NC_011883.1 PFAM: SAICAR synthetase; KEGG: emi:Emin_0220 phosphoribosylaminoimidazolesuccinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 387373 7283971 Ddes_0315 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002478908.1 386669 D 525146 CDS YP_002478909.1 220903597 7283972 complement(387637..388791) 1 NC_011883.1 KEGG: cmi:CMM_0897 hypothetical protein; hypothetical protein 388791 7283972 Ddes_0316 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478909.1 387637 R 525146 CDS YP_002478910.1 220903598 7283973 complement(388975..389133) 1 NC_011883.1 hypothetical protein 389133 7283973 Ddes_0317 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478910.1 388975 R 525146 CDS YP_002478911.1 220903599 7283975 390349..391884 1 NC_011883.1 PFAM: Chloride channel core; KEGG: cpe:CPE1408 hypothetical protein; chloride channel protein 391884 7283975 Ddes_0318 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chloride channel protein YP_002478911.1 390349 D 525146 CDS YP_002478912.1 220903600 7283976 392001..393266 1 NC_011883.1 KEGG: dvl:Dvul_0136 phenylacetate-coenzyme A ligase, putative; phenylacetate-coenzyme A ligase 393266 7283976 Ddes_0319 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phenylacetate-coenzyme A ligase YP_002478912.1 392001 D 525146 CDS YP_002478913.1 220903601 7283977 393689..394543 1 NC_011883.1 KEGG: glo:Glov_1444 protein of unknown function DUF169; hypothetical protein 394543 7283977 Ddes_0320 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478913.1 393689 D 525146 CDS YP_002478914.1 220903602 7283978 complement(394817..395242) 1 NC_011883.1 KEGG: dvu:DVU3225 hypothetical protein; hypothetical protein 395242 7283978 Ddes_0321 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478914.1 394817 R 525146 CDS YP_002478915.1 220903603 7283979 complement(395239..395568) 1 NC_011883.1 KEGG: dvl:Dvul_0162 hypothetical protein; hypothetical protein 395568 7283979 Ddes_0322 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478915.1 395239 R 525146 CDS YP_002478916.1 220903604 7283980 complement(395756..396421) 1 NC_011883.1 PFAM: flagellar basal body-associated protein FliL; KEGG: dvu:DVU3227 flagellar basal body-associated protein, putative; flagellar basal body-associated protein FliL 396421 7283980 Ddes_0323 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar basal body-associated protein FliL YP_002478916.1 395756 R 525146 CDS YP_002478917.1 220903605 7283981 complement(396481..396861) 1 NC_011883.1 PFAM: response regulator receiver; KEGG: dvl:Dvul_0160 response regulator receiver protein; response regulator receiver protein 396861 7283981 Ddes_0324 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002478917.1 396481 R 525146 CDS YP_002478918.1 220903606 7283982 complement(396936..397718) 1 NC_011883.1 KEGG: dvl:Dvul_0159 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; RNA polymerase sigma-28 subunit FliA/WhiG 397718 7283982 Ddes_0325 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RNA polymerase sigma-28 subunit FliA/WhiG YP_002478918.1 396936 R 525146 CDS YP_002478919.1 220903607 7283983 complement(397881..398693) 1 NC_011883.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_0158 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 398693 7283983 Ddes_0326 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cobyrinic acid ac-diamide synthase YP_002478919.1 397881 R 525146 CDS YP_002478920.1 220903608 7283984 complement(398723..399766) 1 NC_011883.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: dvl:Dvul_0157 flagellar biosynthesis protein FlhF, putative; GTP-binding signal recognition particle SRP54 G- domain-containing protein 399766 7283984 Ddes_0327 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTP-binding signal recognition particle SRP54 G- domain-containing protein YP_002478920.1 398723 R 525146 CDS YP_002478921.1 220903609 7283986 400786..400980 1 NC_011883.1 SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 400980 7283986 Ddes_0329 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002478921.1 400786 D 525146 CDS YP_002478922.1 220903610 7283987 401333..401599 1 NC_011883.1 PFAM: helix-turn-helix domain protein; KEGG: hau:Haur_2753 XRE family transcriptional regulator; XRE family transcriptional regulator 401599 7283987 Ddes_0330 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002478922.1 401333 D 525146 CDS YP_002478923.1 220903611 7283988 complement(401682..403781) 1 NC_011883.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 403781 flhA 7283988 flhA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar biosynthesis protein FlhA YP_002478923.1 401682 R 525146 CDS YP_002478924.1 220903612 7283989 complement(403833..404912) 1 NC_011883.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 404912 flhB 7283989 flhB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar biosynthesis protein FlhB YP_002478924.1 403833 R 525146 CDS YP_002478925.1 220903613 7283990 405372..406598 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: dol:Dole_2623 major facilitator transporter; major facilitator superfamily protein 406598 7283990 Ddes_0333 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002478925.1 405372 D 525146 CDS YP_002478926.1 220903614 7283991 complement(406765..407643) 1 NC_011883.1 PFAM: Prephenate dehydrogenase; KEGG: dvl:Dvul_2473 prephenate dehydrogenase; prephenate dehydrogenase 407643 7283991 Ddes_0334 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 prephenate dehydrogenase YP_002478926.1 406765 R 525146 CDS YP_002478927.1 220903615 7283992 complement(407640..409094) 1 NC_011883.1 KEGG: dvu:DVU0463 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 409094 7283992 Ddes_0335 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-phosphoshikimate 1-carboxyvinyltransferase YP_002478927.1 407640 R 525146 CDS YP_002478928.1 220903616 7283993 complement(409091..410350) 1 NC_011883.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: dvl:Dvul_2475 chorismate mutase; chorismate mutase 410350 7283993 Ddes_0336 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chorismate mutase YP_002478928.1 409091 R 525146 CDS YP_002478929.1 220903617 7283994 complement(410352..411335) 1 NC_011883.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-aribino-heptulonate 7-phosphate; 3-dehydroquinate synthase 411335 7283994 Ddes_0337 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-dehydroquinate synthase YP_002478929.1 410352 R 525146 CDS YP_002478930.1 220903618 7283995 complement(411340..412137) 1 NC_011883.1 catalyzes the reversible formation of fructose 1,6-bisphosphate from glycerone phosphate and D-glyceraldehyde 3-phosphate; fructose-bisphosphate aldolase 412137 7283995 Ddes_0338 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 fructose-bisphosphate aldolase YP_002478930.1 411340 R 525146 CDS YP_002478931.1 220903619 7283996 413018..414019 1 NC_011883.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 414019 7283996 Ddes_0339 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 D-cysteine desulfhydrase YP_002478931.1 413018 D 525146 CDS YP_002478932.1 220903620 7283997 414091..415494 1 NC_011883.1 PFAM: Na+/H+ antiporter NhaC; KEGG: dvl:Dvul_0605 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 415494 7283997 Ddes_0340 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Na+/H+ antiporter NhaC YP_002478932.1 414091 D 525146 CDS YP_002478933.1 220903621 7283998 415791..416444 1 NC_011883.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: dps:DP1500 transcription regulator; GntR family transcriptional regulator 416444 7283998 Ddes_0341 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GntR family transcriptional regulator YP_002478933.1 415791 D 525146 CDS YP_002478934.1 220903622 7283999 complement(416741..417784) 1 NC_011883.1 PFAM: phosphoesterase RecJ domain protein; KEGG: lip:LI0703 exopolyphosphatase-like protein; phosphoesterase RecJ domain-containing protein 417784 7283999 Ddes_0342 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoesterase RecJ domain-containing protein YP_002478934.1 416741 R 525146 CDS YP_002478935.1 220903623 7284000 complement(417862..418638) 1 NC_011883.1 KEGG: dvl:Dvul_2481 hypothetical protein; hypothetical protein 418638 7284000 Ddes_0343 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478935.1 417862 R 525146 CDS YP_002478936.1 220903624 7284001 418658..418843 1 NC_011883.1 hypothetical protein 418843 7284001 Ddes_0344 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478936.1 418658 D 525146 CDS YP_002478937.1 220903625 7284002 complement(418840..421752) 1 NC_011883.1 PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: dvl:Dvul_2044 peptidase M16C associated domain-containing protein; peptidase M16C associated domain-containing protein 421752 7284002 Ddes_0345 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M16C associated domain-containing protein YP_002478937.1 418840 R 525146 CDS YP_002478938.1 220903626 7284003 422063..422839 1 NC_011883.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 422839 rpsB 7284003 rpsB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S2 YP_002478938.1 422063 D 525146 CDS YP_002478939.1 220903627 7284004 422978..423838 1 NC_011883.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 423838 tsf 7284004 tsf Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 elongation factor Ts YP_002478939.1 422978 D 525146 CDS YP_002478940.1 220903628 7284005 424121..425704 1 NC_011883.1 PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: rru:Rru_A2870 integral membrane protein TerC; integral membrane protein TerC 425704 7284005 Ddes_0348 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integral membrane protein TerC YP_002478940.1 424121 D 525146 CDS YP_002478941.1 220903629 7284006 complement(426051..427808) 1 NC_011883.1 PFAM: chemotaxis sensory transducer; KEGG: dvl:Dvul_0942 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 427808 7284006 Ddes_0349 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002478941.1 426051 R 525146 CDS YP_002478942.1 220903630 7284007 complement(428010..429227) 1 NC_011883.1 PFAM: Phosphoglycerate mutase; 6-phosphofructo-2-kinase; KEGG: lip:LI0094 fructose-2,6-bisphosphatase; phosphoglycerate mutase 429227 7284007 Ddes_0350 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoglycerate mutase YP_002478942.1 428010 R 525146 CDS YP_002478943.1 220903631 7284008 429305..429997 1 NC_011883.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: csa:Csal_0199 aspartate racemase; aspartate racemase 429997 7284008 Ddes_0351 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate racemase YP_002478943.1 429305 D 525146 CDS YP_002478944.1 220903632 7284009 complement(430796..431992) 1 NC_011883.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 431992 7284009 Ddes_0352 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tyrosyl-tRNA synthetase YP_002478944.1 430796 R 525146 CDS YP_002478945.1 220903633 7284010 complement(432168..432416) 1 NC_011883.1 hypothetical protein 432416 7284010 Ddes_0353 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478945.1 432168 R 525146 CDS YP_002478946.1 220903634 7284011 complement(432931..433836) 1 NC_011883.1 hypothetical protein 433836 7284011 Ddes_0354 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478946.1 432931 R 525146 CDS YP_002478947.1 220903635 7284012 complement(434280..434558) 1 NC_011883.1 hypothetical protein 434558 7284012 Ddes_0355 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478947.1 434280 R 525146 CDS YP_002478948.1 220903636 7284013 complement(434639..435370) 1 NC_011883.1 KEGG: dvl:Dvul_2832 hypothetical protein; hypothetical protein 435370 7284013 Ddes_0356 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478948.1 434639 R 525146 CDS YP_002478949.1 220903637 7284014 complement(435373..436635) 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2833 hypothetical protein; hypothetical protein 436635 7284014 Ddes_0357 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478949.1 435373 R 525146 CDS YP_002478950.1 220903638 7284015 complement(437016..437792) 1 NC_011883.1 PFAM: protein of unknown function UPF0153; KEGG: dvl:Dvul_2824 hypothetical protein; hypothetical protein 437792 7284015 Ddes_0358 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478950.1 437016 R 525146 CDS YP_002478951.1 220903639 7284016 437994..438287 1 NC_011883.1 hypothetical protein 438287 7284016 Ddes_0359 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478951.1 437994 D 525146 CDS YP_002478952.1 220903640 7284017 complement(438295..439188) 1 NC_011883.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 439188 hisG 7284017 hisG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP phosphoribosyltransferase YP_002478952.1 438295 R 525146 CDS YP_002478953.1 220903641 7284018 complement(439200..439613) 1 NC_011883.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 439613 hisI 7284018 hisI Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosyl-AMP cyclohydrolase YP_002478953.1 439200 R 525146 CDS YP_002478954.1 220903642 7284019 439975..441663 1 NC_011883.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dvl:Dvul_0291 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase 441663 7284019 Ddes_0362 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DEAD/DEAH box helicase YP_002478954.1 439975 D 525146 CDS YP_002478955.1 220903643 7284020 441678..442193 1 NC_011883.1 KEGG: dvu:DVU3089 hypothetical protein; hypothetical protein 442193 7284020 Ddes_0363 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478955.1 441678 D 525146 CDS YP_002478956.1 220903644 7284021 442355..443296 1 NC_011883.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: dvl:Dvul_2486 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 443296 7284021 Ddes_0364 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 riboflavin biosynthesis protein RibF YP_002478956.1 442355 D 525146 CDS YP_002478957.1 220903645 7284022 complement(443538..444029) 1 NC_011883.1 KEGG: dra:DR_0094 hypothetical protein; hypothetical protein 444029 7284022 Ddes_0365 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478957.1 443538 R 525146 CDS YP_002478958.1 220903646 7284023 444194..445120 1 NC_011883.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: dvu:DVU2490 histidinol phosphatase, putative; histidinol phosphate phosphatase protein 445120 7284023 Ddes_0366 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidinol phosphate phosphatase protein YP_002478958.1 444194 D 525146 CDS YP_002478959.1 220903647 7284025 446382..447761 1 NC_011883.1 KEGG: sul:SYO3AOP1_0717 conserved hypothetical protein, putative cytochrome; hypothetical protein 447761 7284025 Ddes_0368 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478959.1 446382 D 525146 CDS YP_002478960.1 220903648 7284026 447764..449371 1 NC_011883.1 KEGG: glo:Glov_1763 hypothetical protein; hypothetical protein 449371 7284026 Ddes_0369 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478960.1 447764 D 525146 CDS YP_002478961.1 220903649 7284027 complement(449680..450441) 1 NC_011883.1 PFAM: protein of unknown function DUF165; KEGG: hne:HNE_0462 hypothetical protein; hypothetical protein 450441 7284027 Ddes_0370 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478961.1 449680 R 525146 CDS YP_002478962.1 220903650 7284028 450519..451442 1 NC_011883.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 451442 era 7284028 era Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTP-binding protein Era YP_002478962.1 450519 D 525146 CDS YP_002478963.1 220903651 7284029 451446..452159 1 NC_011883.1 PFAM: alanine racemase domain protein; KEGG: dvl:Dvul_2910 alanine racemase domain-containing protein; alanine racemase domain-containing protein 452159 7284029 Ddes_0372 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alanine racemase domain-containing protein YP_002478963.1 451446 D 525146 CDS YP_002478964.1 220903652 7284030 452303..452941 1 NC_011883.1 PFAM: flagellar basal body-associated protein FliL; KEGG: dvl:Dvul_2914 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 452941 7284030 Ddes_0373 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar basal body-associated protein FliL YP_002478964.1 452303 D 525146 CDS YP_002478965.1 220903653 7284031 452955..453200 1 NC_011883.1 hypothetical protein 453200 7284031 Ddes_0374 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478965.1 452955 D 525146 CDS YP_002478966.1 220903654 7284032 453237..453809 1 NC_011883.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: lip:LI0641 flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein FliN 453809 7284032 Ddes_0375 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar motor switch protein FliN YP_002478966.1 453237 D 525146 CDS YP_002478967.1 220903655 7284033 453814..454467 1 NC_011883.1 PFAM: flagellar biosynthesis protein FliO; KEGG: dvl:Dvul_2916 flagellar biosynthesis protein, FliO, putative; flagellar biosynthesis protein FliO 454467 7284033 Ddes_0376 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar biosynthesis protein FliO YP_002478967.1 453814 D 525146 CDS YP_002478968.1 220903656 7284034 454517..455194 1 NC_011883.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 455194 fliP 7284034 fliP Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar biosynthesis protein FliP YP_002478968.1 454517 D 525146 CDS YP_002478969.1 220903657 7284035 455286..455555 1 NC_011883.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: dvl:Dvul_2918 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 455555 7284035 Ddes_0378 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar biosynthetic protein FliQ YP_002478969.1 455286 D 525146 CDS YP_002478970.1 220903658 7284036 complement(455969..456775) 1 NC_011883.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: dvl:Dvul_2919 RNA methyltransferase; TrmH family RNA methyltransferase 456775 7284036 Ddes_0379 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TrmH family RNA methyltransferase YP_002478970.1 455969 R 525146 CDS YP_002478971.1 220903659 7284037 456912..458579 1 NC_011883.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: dvl:Dvul_2920 lytic transglycosylase, catalytic; lytic transglycosylase 458579 7284037 Ddes_0380 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lytic transglycosylase YP_002478971.1 456912 D 525146 CDS YP_002478972.1 220903660 7284044 complement(464480..465307) 1 NC_011883.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_1132 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 465307 7284044 Ddes_0381 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cobyrinic acid ac-diamide synthase YP_002478972.1 464480 R 525146 CDS YP_002478973.1 220903661 7284045 complement(465413..467308) 1 NC_011883.1 KEGG: dvl:Dvul_1133 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; carbon-monoxide dehydrogenase, catalytic subunit 467308 7284045 Ddes_0382 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carbon-monoxide dehydrogenase, catalytic subunit YP_002478973.1 465413 R 525146 CDS YP_002478974.1 220903662 7284046 complement(467452..468129) 1 NC_011883.1 SMART: regulatory protein Crp; KEGG: chy:CHY_1835 carbon monoxide oxidation system transcription regulator CooA-1; putative Crp/Fnr family transcriptional regulator 468129 7284046 Ddes_0383 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative Crp/Fnr family transcriptional regulator YP_002478974.1 467452 R 525146 CDS YP_002478975.1 220903663 7284047 complement(468386..468634) 1 NC_011883.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dvl:Dvul_1243 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 468634 7284047 Ddes_0384 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase assembly chaperone HypC/HupF YP_002478975.1 468386 R 525146 CDS YP_002478976.1 220903664 7284048 469073..471889 1 NC_011883.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 471889 ileS 7284048 ileS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 isoleucyl-tRNA synthetase YP_002478976.1 469073 D 525146 CDS YP_002478977.1 220903665 7284049 471894..472430 1 NC_011883.1 KEGG: dvl:Dvul_1239 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase 472430 7284049 Ddes_0386 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lipoprotein signal peptidase YP_002478977.1 471894 D 525146 CDS YP_002478978.1 220903666 7284050 472427..472633 1 NC_011883.1 KEGG: dvu:DVU1929 hypothetical protein; hypothetical protein 472633 7284050 Ddes_0387 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478978.1 472427 D 525146 CDS YP_002478979.1 220903667 7284051 472648..473625 1 NC_011883.1 KEGG: dvl:Dvul_1237 TPR repeat-containing protein; TIGRFAM: tol-pal system protein YbgF; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; tol-pal system protein YbgF 473625 7284051 Ddes_0388 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tol-pal system protein YbgF YP_002478979.1 472648 D 525146 CDS YP_002478980.1 220903668 7284052 473714..474349 1 NC_011883.1 KEGG: dvu:DVU1458 chemotaxis protein CheZ, putative; putative chemotaxis phosphatase, CheZ 474349 7284052 Ddes_0389 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative chemotaxis phosphatase, CheZ YP_002478980.1 473714 D 525146 CDS YP_002478981.1 220903669 7284053 474676..475500 1 NC_011883.1 PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_1688 nitroreductase; nitroreductase 475500 7284053 Ddes_0390 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nitroreductase YP_002478981.1 474676 D 525146 CDS YP_002478982.1 220903670 7284054 476288..477085 1 NC_011883.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0740 flagellar basal body rod protein; hypothetical protein 477085 7284054 Ddes_0391 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478982.1 476288 D 525146 CDS YP_002478983.1 220903671 7284055 477189..477974 1 NC_011883.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 477974 flgG 7284055 flgG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar basal body rod protein FlgG YP_002478983.1 477189 D 525146 CDS YP_002478984.1 220903672 7284056 477993..479243 1 NC_011883.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: dvl:Dvul_2427 FlgA family protein; flagella basal body P-ring formation protein FlgA 479243 7284056 Ddes_0393 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagella basal body P-ring formation protein FlgA YP_002478984.1 477993 D 525146 CDS YP_002478985.1 220903673 7284057 479292..480011 1 NC_011883.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 480011 flgH 7284057 flgH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar basal body L-ring protein YP_002478985.1 479292 D 525146 CDS YP_002478986.1 220903674 7284059 complement(481291..481866) 1 NC_011883.1 KEGG: bcm:Bcenmc03_5566 integrase catalytic region; hypothetical protein 481866 7284059 Ddes_0395 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478986.1 481291 R 525146 CDS YP_002478987.1 220903675 7284060 482458..483591 1 NC_011883.1 KEGG: sus:Acid_6620 glycosyl transferase, group 1; glycosyltransferase-like protein 483591 7284060 Ddes_0396 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycosyltransferase-like protein YP_002478987.1 482458 D 525146 CDS YP_002478988.1 220903676 7284061 complement(483707..484981) 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_4708 glycosyl transferase group 1; group 1 glycosyl transferase 484981 7284061 Ddes_0397 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002478988.1 483707 R 525146 CDS YP_002478989.1 220903677 7284062 complement(485030..486088) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: tel:tll0993 probable glycosly transferase; family 2 glycosyl transferase 486088 7284062 Ddes_0398 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002478989.1 485030 R 525146 CDS YP_002478990.1 220903678 7284063 complement(486258..487178) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_2592 glycosyltransferase domain protein; family 2 glycosyl transferase 487178 7284063 Ddes_0399 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002478990.1 486258 R 525146 CDS YP_002478991.1 220903679 7284064 complement(487187..488014) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_3029 glycosyl transferase family protein; family 2 glycosyl transferase 488014 7284064 Ddes_0400 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002478991.1 487187 R 525146 CDS YP_002478992.1 220903680 7284066 complement(488810..489838) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1682 glycosyl transferase family protein; family 2 glycosyl transferase 489838 7284066 Ddes_0402 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002478992.1 488810 R 525146 CDS YP_002478993.1 220903681 7284067 complement(489894..490652) 1 NC_011883.1 PFAM: Methyltransferase type 12; KEGG: hypothetical protein; type 12 methyltransferase 490652 7284067 Ddes_0403 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 12 methyltransferase YP_002478993.1 489894 R 525146 CDS YP_002478994.1 220903682 7284068 complement(490710..491555) 1 NC_011883.1 KEGG: rpe:RPE_4247 glycosyl transferase, family 2; hypothetical protein 491555 7284068 Ddes_0404 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478994.1 490710 R 525146 CDS YP_002478995.1 220903683 7284069 complement(491975..493225) 1 NC_011883.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvl:Dvul_2647 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 493225 7284069 Ddes_0405 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DegT/DnrJ/EryC1/StrS aminotransferase YP_002478995.1 491975 R 525146 CDS YP_002478996.1 220903684 7284070 complement(493386..495215) 1 NC_011883.1 KEGG: dvl:Dvul_2646 hypothetical protein; hypothetical protein 495215 7284070 Ddes_0406 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478996.1 493386 R 525146 CDS YP_002478997.1 220903685 7284071 complement(495200..495871) 1 NC_011883.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_2637 hexapaptide repeat-containing transferase; transferase hexapeptide repeat containing protein 495871 7284071 Ddes_0407 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transferase hexapeptide repeat containing protein YP_002478997.1 495200 R 525146 CDS YP_002478998.1 220903686 7284072 complement(496002..497828) 1 NC_011883.1 KEGG: mag:amb0137 hypothetical protein; hypothetical protein 497828 7284072 Ddes_0408 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478998.1 496002 R 525146 CDS YP_002478999.1 220903687 7284073 complement(498067..498759) 1 NC_011883.1 hypothetical protein 498759 7284073 Ddes_0409 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002478999.1 498067 R 525146 CDS YP_002479000.1 220903688 7284074 complement(499219..501051) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpb:Cphamn1_0373 ABC transporter-related protein; ABC transporter-like protein 501051 7284074 Ddes_0410 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479000.1 499219 R 525146 CDS YP_002479001.1 220903689 7284075 complement(501045..501989) 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein; K02377 GDP-L-fucose synthase; NAD-dependent epimerase/dehydratase 501989 7284075 Ddes_0411 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent epimerase/dehydratase YP_002479001.1 501045 R 525146 CDS YP_002479002.1 220903690 7284076 complement(501995..503143) 1 NC_011883.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: dvu:DVU0448 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 503143 7284076 Ddes_0412 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GDP-mannose 4,6-dehydratase YP_002479002.1 501995 R 525146 CDS YP_002479003.1 220903691 7284077 complement(503254..504696) 1 NC_011883.1 KEGG: syf:Synpcc7942_1608 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 504696 7284077 Ddes_0413 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002479003.1 503254 R 525146 CDS YP_002479004.1 220903692 7284078 complement(504834..506255) 1 NC_011883.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gbm:Gbem_1134 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphomannomutase 506255 7284078 Ddes_0414 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphomannomutase YP_002479004.1 504834 R 525146 CDS YP_002479005.1 220903693 7284079 complement(506470..507279) 1 NC_011883.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: eba:ebA3750 putative transcriptional regulator; AraC family transcriptional regulator 507279 7284079 Ddes_0415 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AraC family transcriptional regulator YP_002479005.1 506470 R 525146 CDS YP_002479006.1 220903694 7284080 507403..508599 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_1047 major facilitator transporter; major facilitator superfamily protein 508599 7284080 Ddes_0416 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002479006.1 507403 D 525146 CDS YP_002479007.1 220903695 7284081 complement(508703..509131) 1 NC_011883.1 hypothetical protein 509131 7284081 Ddes_0417 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479007.1 508703 R 525146 CDS YP_002479008.1 220903696 7284082 complement(509175..509675) 1 NC_011883.1 hypothetical protein 509675 7284082 Ddes_0418 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479008.1 509175 R 525146 CDS YP_002479009.1 220903697 7284083 complement(509650..510195) 1 NC_011883.1 PFAM: 4-vinyl reductase 4VR; KEGG: mbn:Mboo_0934 4-vinyl reductase, 4VR; 4-vinyl reductase 4VR 510195 7284083 Ddes_0419 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4-vinyl reductase 4VR YP_002479009.1 509650 R 525146 CDS YP_002479010.1 220903698 7284084 511141..511491 1 NC_011883.1 PFAM: CI repressor; KEGG: dvl:Dvul_2281 putative phage repressor; CI repressor 511491 7284084 Ddes_0420 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CI repressor YP_002479010.1 511141 D 525146 CDS YP_002479011.1 220903699 7284085 complement(511632..513356) 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cdf:CD1476 putative signaling protein; diguanylate cyclase/phosphodiesterase 513356 7284085 Ddes_0421 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase/phosphodiesterase YP_002479011.1 511632 R 525146 CDS YP_002479012.1 220903700 7284086 513876..514829 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: glo:Glov_2679 diguanylate cyclase; diguanylate cyclase 514829 7284086 Ddes_0422 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase YP_002479012.1 513876 D 525146 CDS YP_002479013.1 220903701 7284087 complement(514902..516056) 1 NC_011883.1 KEGG: tex:Teth514_0779 pyridoxal phosphate-dependent acyltransferase, putative; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase 516056 7284087 Ddes_0423 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 8-amino-7-oxononanoate synthase YP_002479013.1 514902 R 525146 CDS YP_002479014.1 220903702 7284088 complement(516053..516760) 1 NC_011883.1 catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A; 6-carboxyhexanoate--CoA ligase 516760 7284088 Ddes_0424 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 6-carboxyhexanoate--CoA ligase YP_002479014.1 516053 R 525146 CDS YP_002479015.1 220903703 7284089 complement(516894..517532) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH759 ABC transporter ATP-binding protein; ABC transporter-like protein 517532 7284089 Ddes_0425 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479015.1 516894 R 525146 CDS YP_002479016.1 220903704 7284090 complement(517529..518305) 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH758 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 518305 7284090 Ddes_0426 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002479016.1 517529 R 525146 CDS YP_002479017.1 220903705 7284091 complement(518298..519311) 1 NC_011883.1 KEGG: eba:ebA2115 putative periplasmic component of ABC-type transport system; hypothetical protein 519311 7284091 Ddes_0427 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479017.1 518298 R 525146 CDS YP_002479018.1 220903706 7284092 complement(519308..520393) 1 NC_011883.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_A1457 O-methyltransferase family protein; type 12 methyltransferase 520393 7284092 Ddes_0428 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 12 methyltransferase YP_002479018.1 519308 R 525146 CDS YP_002479019.1 220903707 7284093 complement(520396..522459) 1 NC_011883.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rru:Rru_A1458 TonB-dependent receptor; TonB-dependent receptor 522459 7284093 Ddes_0429 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TonB-dependent receptor YP_002479019.1 520396 R 525146 CDS YP_002479020.1 220903708 7284094 522675..523613 1 NC_011883.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ana:alr2575 transcriptional regulator; AraC family transcriptional regulator 523613 7284094 Ddes_0430 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AraC family transcriptional regulator YP_002479020.1 522675 D 525146 CDS YP_002479021.1 220903709 7284095 523664..523930 1 NC_011883.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA; transposase IS3/IS911 family protein 523930 7284095 Ddes_0431 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transposase IS3/IS911 family protein YP_002479021.1 523664 D 525146 CDS YP_002479022.1 220903710 7284096 523987..524775 1 NC_011883.1 PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit; integrase catalytic subunit 524775 7284096 Ddes_0432 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase catalytic subunit YP_002479022.1 523987 D 525146 CDS YP_002479023.1 220903711 7284097 525082..525729 1 NC_011883.1 PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_0455 helix-turn-helix domain protein; XRE family transcriptional regulator 525729 7284097 Ddes_0433 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002479023.1 525082 D 525146 CDS YP_002479024.1 220903712 7284098 complement(525615..527510) 1 NC_011883.1 PFAM: plasmid recombination protein; SMART: Toprim sub domain protein; KEGG: npu:Npun_R3345 plasmid recombination enzyme; plasmid recombination protein 527510 7284098 Ddes_0434 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 plasmid recombination protein YP_002479024.1 525615 R 525146 CDS YP_002479025.1 220903713 7284099 527776..528615 1 NC_011883.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pha:PSHAa1599 Soj protein, ATPase involved in chromosome partitioning; Cobyrinic acid ac-diamide synthase 528615 7284099 Ddes_0435 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cobyrinic acid ac-diamide synthase YP_002479025.1 527776 D 525146 CDS YP_002479026.1 220903714 7284100 528605..529138 1 NC_011883.1 KEGG: pha:PSHAa1598 hypothetical protein; hypothetical protein 529138 7284100 Ddes_0436 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479026.1 528605 D 525146 CDS YP_002479027.1 220903715 7284101 529135..529830 1 NC_011883.1 KEGG: pha:PSHAa1597 hypothetical protein; hypothetical protein 529830 7284101 Ddes_0437 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479027.1 529135 D 525146 CDS YP_002479028.1 220903716 7284102 complement(join(529887..530798,530798..530899)) 1 NC_011883.1 KEGG: bvi:Bcep1808_0279 phage integrase family protein; hypothetical protein 530899 7284102 Ddes_0438 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479028.1 529887 R 525146 CDS YP_002479029.1 220903717 7284104 complement(531322..532140) 1 NC_011883.1 SMART: Tetratricopeptide domain protein; KEGG: dvu:DVU1955 TPR domain-containing protein; Tetratricopeptide domain-containing protein 532140 7284104 Ddes_0439 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Tetratricopeptide domain-containing protein YP_002479029.1 531322 R 525146 CDS YP_002479030.1 220903718 7284105 complement(532134..532874) 1 NC_011883.1 KEGG: dvl:Dvul_1214 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; cytidyltransferase-like domain-containing protein 532874 7284105 Ddes_0440 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytidyltransferase-like domain-containing protein YP_002479030.1 532134 R 525146 CDS YP_002479031.1 220903719 7284106 complement(532874..534145) 1 NC_011883.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 534145 proA 7284106 proA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 gamma-glutamyl phosphate reductase YP_002479031.1 532874 R 525146 CDS YP_002479032.1 220903720 7284107 534330..535097 1 NC_011883.1 KEGG: dvu:DVU1952 hypothetical protein; hypothetical protein 535097 7284107 Ddes_0442 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479032.1 534330 D 525146 CDS YP_002479033.1 220903721 7284108 535226..537082 1 NC_011883.1 TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dvl:Dvul_1217 indolepyruvate ferredoxin oxidoreductase; indolepyruvate ferredoxin oxidoreductase subunit alpha 537082 7284108 Ddes_0443 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 indolepyruvate ferredoxin oxidoreductase subunit alpha YP_002479033.1 535226 D 525146 CDS YP_002479034.1 220903722 7284109 537093..537701 1 NC_011883.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dvl:Dvul_1218 indolepyruvate ferredoxin oxidoreductase; Indolepyruvate ferredoxin oxidoreductase 537701 7284109 Ddes_0444 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Indolepyruvate ferredoxin oxidoreductase YP_002479034.1 537093 D 525146 CDS YP_002479035.1 220903723 7284110 complement(537852..539012) 1 NC_011883.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 539012 7284110 Ddes_0445 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribosomal RNA large subunit methyltransferase N YP_002479035.1 537852 R 525146 CDS YP_002479036.1 220903724 7284111 complement(539390..540721) 1 NC_011883.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvl:Dvul_0462 metal dependent phosphohydrolase; metal dependent phosphohydrolase 540721 7284111 Ddes_0446 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002479036.1 539390 R 525146 CDS YP_002479037.1 220903725 7284112 complement(541150..542319) 1 NC_011883.1 PFAM: Polysulphide reductase NrfD; KEGG: dvl:Dvul_1779 polysulphide reductase, NrfD; polysulfide reductase NrfD 542319 7284112 Ddes_0447 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polysulfide reductase NrfD YP_002479037.1 541150 R 525146 CDS YP_002479038.1 220903726 7284113 complement(542332..543114) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_1778 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 543114 7284113 Ddes_0448 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479038.1 542332 R 525146 CDS YP_002479039.1 220903727 7284114 complement(543114..543494) 1 NC_011883.1 KEGG: dvl:Dvul_1777 cytochrome c family protein; cytochrome c family protein 543494 7284114 Ddes_0449 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c family protein YP_002479039.1 543114 R 525146 CDS YP_002479040.1 220903728 7284115 complement(543495..545138) 1 NC_011883.1 KEGG: dvl:Dvul_1776 reductase, iron-sulfur binding subunit, putative; reductase, iron-sulfur binding subunit 545138 7284115 Ddes_0450 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 reductase, iron-sulfur binding subunit YP_002479040.1 543495 R 525146 CDS YP_002479041.1 220903729 7284116 complement(545151..546170) 1 NC_011883.1 PFAM: Nitrate reductase gamma subunit; KEGG: dvl:Dvul_1775 nitrate reductase, gamma subunit; Nitrate reductase gamma subunit 546170 7284116 Ddes_0451 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Nitrate reductase gamma subunit YP_002479041.1 545151 R 525146 CDS YP_002479042.1 220903730 7284117 complement(546293..546820) 1 NC_011883.1 KEGG: dvl:Dvul_1774 hypothetical protein; hypothetical protein 546820 7284117 Ddes_0452 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479042.1 546293 R 525146 CDS YP_002479043.1 220903731 7284118 complement(547177..548190) 1 NC_011883.1 KEGG: dvl:Dvul_1773 hypothetical protein; hypothetical protein 548190 7284118 Ddes_0453 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479043.1 547177 R 525146 CDS YP_002479044.1 220903732 7284119 complement(548418..549689) 1 NC_011883.1 KEGG: dvl:Dvul_1771 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; sulfate adenylyltransferase 549689 7284119 Ddes_0454 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfate adenylyltransferase YP_002479044.1 548418 R 525146 CDS YP_002479045.1 220903733 7284120 complement(550814..551338) 1 NC_011883.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dvl:Dvul_1019 single-strand binding protein; single-strand binding protein 551338 7284120 Ddes_0455 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 single-strand binding protein YP_002479045.1 550814 R 525146 CDS YP_002479046.1 220903734 7284121 complement(551376..551714) 1 NC_011883.1 KEGG: dvl:Dvul_1018 hypothetical protein; hypothetical protein 551714 7284121 Ddes_0456 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479046.1 551376 R 525146 CDS YP_002479047.1 220903735 7284122 complement(551757..552407) 1 NC_011883.1 KEGG: dvu:DVU2224 hypothetical protein; hypothetical protein 552407 7284122 Ddes_0457 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479047.1 551757 R 525146 CDS YP_002479048.1 220903736 7284123 complement(552700..554958) 1 NC_011883.1 PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: dvl:Dvul_1016 acetyl-CoA carboxylase; acetyl-CoA carboxylase 554958 7284123 Ddes_0458 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetyl-CoA carboxylase YP_002479048.1 552700 R 525146 CDS YP_002479049.1 220903737 7284124 complement(554965..555636) 1 NC_011883.1 PFAM: Protein of unknown function DUF1847; KEGG: pca:Pcar_3043 conserved uncharacterized metal-binding protein; hypothetical protein 555636 7284124 Ddes_0459 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479049.1 554965 R 525146 CDS YP_002479050.1 220903738 7284125 complement(555652..557106) 1 NC_011883.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: dvl:Dvul_1015 pyruvate carboxylase; pyruvate carboxylase 557106 7284125 Ddes_0460 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate carboxylase YP_002479050.1 555652 R 525146 CDS YP_002479051.1 220903739 7284126 557374..558285 1 NC_011883.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 558285 7284126 Ddes_0461 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 purine nucleoside phosphorylase YP_002479051.1 557374 D 525146 CDS YP_002479052.1 220903740 7284127 558343..560169 1 NC_011883.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: dvl:Dvul_1010 GTP-binding protein TypA; GTP-binding protein TypA 560169 7284127 Ddes_0462 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTP-binding protein TypA YP_002479052.1 558343 D 525146 CDS YP_002479053.1 220903741 7284128 complement(560266..560772) 1 NC_011883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pau:PA14_45980 putative acetyltransferase; N-acetyltransferase GCN5 560772 7284128 Ddes_0463 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002479053.1 560266 R 525146 CDS YP_002479054.1 220903742 7284129 complement(561126..565778) 1 NC_011883.1 PFAM: protein of unknown function DUF490; KEGG: rru:Rru_A2098 hypothetical protein; hypothetical protein 565778 7284129 Ddes_0464 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479054.1 561126 R 525146 CDS YP_002479055.1 220903743 7284130 complement(565778..567886) 1 NC_011883.1 PFAM: surface antigen (D15); KEGG: dvu:DVU2102 OMP85 family outer membrane protein; surface antigen (D15) 567886 7284130 Ddes_0465 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 surface antigen (D15) YP_002479055.1 565778 R 525146 CDS YP_002479056.1 220903744 7284131 568053..568400 1 NC_011883.1 PFAM: Domain of unknown function DUF1791; KEGG: dvl:Dvul_2357 hypothetical protein; hypothetical protein 568400 7284131 Ddes_0466 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479056.1 568053 D 525146 CDS YP_002479057.1 220903745 7284132 568689..569546 1 NC_011883.1 PFAM: hydroxyethylthiazole kinase; KEGG: cac:CAC3096 hydroxyethylthiazole kinase; Hydroxyethylthiazole kinase 569546 7284132 Ddes_0467 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Hydroxyethylthiazole kinase YP_002479057.1 568689 D 525146 CDS YP_002479058.1 220903746 7284133 complement(570157..574422) 1 NC_011883.1 KEGG: lip:LI0332 carbohydrate phosphorylase family protein; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen synthase; alpha-glucan phosphorylase 574422 7284133 Ddes_0468 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alpha-glucan phosphorylase YP_002479058.1 570157 R 525146 CDS YP_002479059.1 220903747 7284134 complement(574470..575933) 1 NC_011883.1 PFAM: glycoside hydrolase family 57; KEGG: lip:LI0331 alpha-amylase; alpha-amylase 575933 7284134 Ddes_0469 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alpha-amylase YP_002479059.1 574470 R 525146 CDS YP_002479060.1 220903748 7284135 complement(575933..577303) 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: sat:SYN_00881 4-alpha-glucanotransferase; group 1 glycosyl transferase 577303 7284135 Ddes_0470 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002479060.1 575933 R 525146 CDS YP_002479061.1 220903749 7284136 complement(577389..579551) 1 NC_011883.1 TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: lip:LI0329 Glyen debranching enzyme; glycogen debranching protein 579551 7284136 Ddes_0471 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycogen debranching protein YP_002479061.1 577389 R 525146 CDS YP_002479062.1 220903750 7284137 580130..581251 1 NC_011883.1 PFAM: Extracellular ligand-binding receptor; KEGG: dvl:Dvul_2254 extracellular ligand-binding receptor; extracellular ligand-binding receptor 581251 7284137 Ddes_0472 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 extracellular ligand-binding receptor YP_002479062.1 580130 D 525146 CDS YP_002479063.1 220903751 7284138 581507..582412 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: dvl:Dvul_2253 inner-membrane translocator; inner-membrane translocator 582412 7284138 Ddes_0473 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002479063.1 581507 D 525146 CDS YP_002479064.1 220903752 7284139 582409..583419 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: dvl:Dvul_2252 inner-membrane translocator; inner-membrane translocator 583419 7284139 Ddes_0474 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002479064.1 582409 D 525146 CDS YP_002479065.1 220903753 7284140 583416..584186 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2251 ABC transporter related; ABC transporter-like protein 584186 7284140 Ddes_0475 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479065.1 583416 D 525146 CDS YP_002479066.1 220903754 7284141 584190..584900 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2250 ABC transporter related; ABC transporter-like protein 584900 7284141 Ddes_0476 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479066.1 584190 D 525146 CDS YP_002479067.1 220903755 7284142 complement(585383..586459) 1 NC_011883.1 PFAM: dihydrodipicolinate reductase; KEGG: emi:Emin_0479 hypothetical protein; dihydrodipicolinate reductase 586459 7284142 Ddes_0477 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydrodipicolinate reductase YP_002479067.1 585383 R 525146 CDS YP_002479068.1 220903756 7284143 complement(586690..587508) 1 NC_011883.1 PFAM: MltA-interacting MipA family protein; KEGG: esa:ESA_02172 hypothetical protein; MltA-interacting MipA family protein 587508 7284143 Ddes_0478 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MltA-interacting MipA family protein YP_002479068.1 586690 R 525146 CDS YP_002479069.1 220903757 7284144 complement(587517..588686) 1 NC_011883.1 PFAM: phosphoglycerate kinase; KEGG: dvu:DVU2529 phosphoglycerate kinase; phosphoglycerate kinase 588686 7284144 Ddes_0479 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoglycerate kinase YP_002479069.1 587517 R 525146 CDS YP_002479070.1 220903758 7284145 complement(588921..590924) 1 NC_011883.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: dvu:DVU2530 transketolase; transketolase 590924 7284145 Ddes_0480 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transketolase YP_002479070.1 588921 R 525146 CDS YP_002479071.1 220903759 7284146 complement(590935..591663) 1 NC_011883.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: dvu:DVU2531 ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 591663 7284146 Ddes_0481 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ribulose-phosphate 3-epimerase YP_002479071.1 590935 R 525146 CDS YP_002479072.1 220903760 7284147 591830..592024 1 NC_011883.1 hypothetical protein 592024 7284147 Ddes_0482 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479072.1 591830 D 525146 CDS YP_002479073.1 220903761 7284148 complement(592165..592590) 1 NC_011883.1 PFAM: regulatory protein MerR; KEGG: dvl:Dvul_0713 MerR family transcriptional regulator; MerR family transcriptional regulator 592590 7284148 Ddes_0483 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MerR family transcriptional regulator YP_002479073.1 592165 R 525146 CDS YP_002479074.1 220903762 7284149 complement(592670..595075) 1 NC_011883.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 595075 pheT 7284149 pheT Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phenylalanyl-tRNA synthetase subunit beta YP_002479074.1 592670 R 525146 CDS YP_002479075.1 220903763 7284150 complement(595185..595631) 1 NC_011883.1 hypothetical protein 595631 7284150 Ddes_0485 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479075.1 595185 R 525146 CDS YP_002479076.1 220903764 7284151 complement(595642..596679) 1 NC_011883.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 596679 pheS 7284151 pheS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phenylalanyl-tRNA synthetase subunit alpha YP_002479076.1 595642 R 525146 CDS YP_002479077.1 220903765 7284152 complement(596882..597238) 1 NC_011883.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 597238 rplT 7284152 rplT Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L20 YP_002479077.1 596882 R 525146 CDS YP_002479078.1 220903766 7284153 complement(597533..597730) 1 NC_011883.1 PFAM: ribosomal protein L35; KEGG: dvl:Dvul_0709 50S ribosomal protein L35; 50S ribosomal protein L35 597730 rpmI 7284153 rpmI Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L35 YP_002479078.1 597533 R 525146 CDS YP_002479079.1 220903767 7284154 complement(597993..598523) 1 NC_011883.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 598523 infC 7284154 infC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 translation initiation factor IF-3 YP_002479079.1 597993 R 525146 CDS YP_002479080.1 220903768 7284155 complement(598525..600468) 1 NC_011883.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: dvl:Dvul_0707 threonyl-tRNA synthetase; threonyl-tRNA synthetase 600468 7284155 Ddes_0490 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 threonyl-tRNA synthetase YP_002479080.1 598525 R 525146 CDS YP_002479081.1 220903769 7284157 601296..601760 1 NC_011883.1 PFAM: MOSC domain containing protein; KEGG: cpy:Cphy_1481 molybdenum cofactor synthesis domain-containing protein; MOSC domain-containing protein 601760 7284157 Ddes_0491 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MOSC domain-containing protein YP_002479081.1 601296 D 525146 CDS YP_002479082.1 220903770 7284158 complement(601819..602520) 1 NC_011883.1 PFAM: protein of unknown function DUF554; KEGG: sfv:SFV_3025 putative transport protein; hypothetical protein 602520 7284158 Ddes_0492 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479082.1 601819 R 525146 CDS YP_002479083.1 220903771 7284159 603341..603607 1 NC_011883.1 PFAM: RNP-1 like RNA-binding protein; KEGG: dvl:Dvul_0803 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 603607 7284159 Ddes_0493 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RNP-1 like RNA-binding protein YP_002479083.1 603341 D 525146 CDS YP_002479084.1 220903772 7284160 603623..604129 1 NC_011883.1 hypothetical protein 604129 7284160 Ddes_0494 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479084.1 603623 D 525146 CDS YP_002479085.1 220903773 7284163 complement(604935..605360) 1 NC_011883.1 KEGG: dvl:Dvul_2814 hypothetical protein; hypothetical protein 605360 7284163 Ddes_0496 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479085.1 604935 R 525146 CDS YP_002479086.1 220903774 7284164 605640..606110 1 NC_011883.1 PFAM: phosphatidylglycerophosphatase A; KEGG: dvu:DVU0528 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A 606110 7284164 Ddes_0497 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphatidylglycerophosphatase A YP_002479086.1 605640 D 525146 CDS YP_002479087.1 220903775 7284165 complement(606211..606429) 1 NC_011883.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 606429 infA 7284165 infA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 translation initiation factor IF-1 YP_002479087.1 606211 R 525146 CDS YP_002479088.1 220903776 7284166 complement(606772..607629) 1 NC_011883.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: dvl:Dvul_2948 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 607629 7284166 Ddes_0499 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 prolipoprotein diacylglyceryl transferase YP_002479088.1 606772 R 525146 CDS YP_002479089.1 220903777 7284167 complement(607629..608120) 1 NC_011883.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: dvl:Dvul_2691 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 608120 7284167 Ddes_0500 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdenum cofactor biosynthesis protein C YP_002479089.1 607629 R 525146 CDS YP_002479090.1 220903778 7284168 complement(608183..609355) 1 NC_011883.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: dvu:DVU2975 hydrolase, putative; membrane-bound metal-dependent hydrolase 609355 7284168 Ddes_0501 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 membrane-bound metal-dependent hydrolase YP_002479090.1 608183 R 525146 CDS YP_002479091.1 220903779 7284169 complement(609359..609700) 1 NC_011883.1 hypothetical protein 609700 7284169 Ddes_0502 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479091.1 609359 R 525146 CDS YP_002479092.1 220903780 7284170 610151..610798 1 NC_011883.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 610798 7284170 Ddes_0503 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphatidylserine decarboxylase YP_002479092.1 610151 D 525146 CDS YP_002479093.1 220903781 7284171 610843..611604 1 NC_011883.1 KEGG: dvl:Dvul_0392 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 611604 7284171 Ddes_0504 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_002479093.1 610843 D 525146 CDS YP_002479094.1 220903782 7284172 611720..613267 1 NC_011883.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 613267 7284172 Ddes_0505 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-isopropylmalate synthase YP_002479094.1 611720 D 525146 CDS YP_002479095.1 220903783 7284173 613459..614721 1 NC_011883.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 614721 7284173 Ddes_0506 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-isopropylmalate dehydratase large subunit YP_002479095.1 613459 D 525146 CDS YP_002479096.1 220903784 7284174 614856..615353 1 NC_011883.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 615353 leuD 7284174 leuD Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-isopropylmalate dehydratase small subunit YP_002479096.1 614856 D 525146 CDS YP_002479097.1 220903785 7284175 complement(615395..615583) 1 NC_011883.1 hypothetical protein 615583 7284175 Ddes_0508 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479097.1 615395 R 525146 CDS YP_002479098.1 220903786 7284176 615630..616703 1 NC_011883.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 616703 7284176 Ddes_0509 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-isopropylmalate dehydrogenase YP_002479098.1 615630 D 525146 CDS YP_002479099.1 220903787 7284177 complement(616990..619287) 1 NC_011883.1 KEGG: cdf:CD0997 putative signaling protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 619287 7284177 Ddes_0510 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PAS/PAC sensor-containing diguanylate cyclase YP_002479099.1 616990 R 525146 CDS YP_002479100.1 220903788 7284178 619494..620861 1 NC_011883.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 620861 7284178 Ddes_0511 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA (uracil-5-)-methyltransferase Gid YP_002479100.1 619494 D 525146 CDS YP_002479101.1 220903789 7284179 complement(621131..622060) 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bth:BT_3290 hypothetical protein; hypothetical protein 622060 7284179 Ddes_0512 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479101.1 621131 R 525146 CDS YP_002479102.1 220903790 7284180 complement(622449..623249) 1 NC_011883.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: dvl:Dvul_2527 rare lipoprotein A; rare lipoprotein A 623249 7284180 Ddes_0513 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rare lipoprotein A YP_002479102.1 622449 R 525146 CDS YP_002479103.1 220903791 7284181 complement(624141..625022) 1 NC_011883.1 PFAM: peptidase M22 glycoprotease; KEGG: dvl:Dvul_2118 peptidase M22, glycoprotease; peptidase M22 glycoprotease 625022 7284181 Ddes_0514 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M22 glycoprotease YP_002479103.1 624141 R 525146 CDS YP_002479104.1 220903792 7284182 complement(625019..626209) 1 NC_011883.1 KEGG: dvl:Dvul_2117 putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 626209 7284182 Ddes_0515 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 membrane-associated zinc metalloprotease YP_002479104.1 625019 R 525146 CDS YP_002479105.1 220903793 7284183 complement(626203..627534) 1 NC_011883.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 627534 7284183 Ddes_0516 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002479105.1 626203 R 525146 CDS YP_002479106.1 220903794 7284184 complement(627914..628732) 1 NC_011883.1 PFAM: phosphatidate cytidylyltransferase; KEGG: dvl:Dvul_2114 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 628732 7284184 Ddes_0517 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphatidate cytidylyltransferase YP_002479106.1 627914 R 525146 CDS YP_002479107.1 220903795 7284185 complement(628722..629564) 1 NC_011883.1 KEGG: dvl:Dvul_2113 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 629564 7284185 Ddes_0518 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 undecaprenyl diphosphate synthase YP_002479107.1 628722 R 525146 CDS YP_002479108.1 220903796 7284186 complement(629710..630270) 1 NC_011883.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 630270 frr 7284186 frr Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribosome recycling factor YP_002479108.1 629710 R 525146 CDS YP_002479109.1 220903797 7284187 complement(630507..631220) 1 NC_011883.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 631220 pyrH 7284187 pyrH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 uridylate kinase YP_002479109.1 630507 R 525146 CDS YP_002479110.1 220903798 7284188 complement(631362..631745) 1 NC_011883.1 KEGG: dvl:Dvul_2683 hypothetical protein; hypothetical protein 631745 7284188 Ddes_0521 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479110.1 631362 R 525146 CDS YP_002479111.1 220903799 7284189 complement(631745..632095) 1 NC_011883.1 PFAM: branched-chain amino acid transport; KEGG: dps:DP2464 hypothetical protein; branched-chain amino acid transport 632095 7284189 Ddes_0522 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 branched-chain amino acid transport YP_002479111.1 631745 R 525146 CDS YP_002479112.1 220903800 7284190 complement(632092..632838) 1 NC_011883.1 PFAM: AzlC family protein; KEGG: dvl:Dvul_2930 AzlC family protein; AzlC family protein 632838 7284190 Ddes_0523 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AzlC family protein YP_002479112.1 632092 R 525146 CDS YP_002479113.1 220903801 7284191 complement(632910..633446) 1 NC_011883.1 PFAM: HPP family protein; KEGG: mgm:Mmc1_0464 HPP family protein+B94; HPP family protein 633446 7284191 Ddes_0524 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HPP family protein YP_002479113.1 632910 R 525146 CDS YP_002479114.1 220903802 7284192 complement(633642..634958) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_1913 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 634958 7284192 Ddes_0525 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479114.1 633642 R 525146 CDS YP_002479115.1 220903803 7284193 complement(635110..635571) 1 NC_011883.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: fno:Fnod_1620 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein 635571 7284193 Ddes_0526 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyridoxamine 5'-phosphate oxidase-like protein YP_002479115.1 635110 R 525146 CDS YP_002479116.1 220903804 7284194 complement(635552..636094) 1 NC_011883.1 KEGG: tde:TDE1177 flavodoxin family protein; flavodoxin family protein 636094 7284194 Ddes_0527 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flavodoxin family protein YP_002479116.1 635552 R 525146 CDS YP_002479117.1 220903805 7284195 complement(636186..636920) 1 NC_011883.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: glo:Glov_2803 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 636920 7284195 Ddes_0528 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Crp/Fnr family transcriptional regulator YP_002479117.1 636186 R 525146 CDS YP_002479118.1 220903806 7284196 complement(637241..637987) 1 NC_011883.1 PFAM: flagellar protein FliS; KEGG: dvl:Dvul_2120 flagellar protein FliS; flagellar protein FliS 637987 7284196 Ddes_0529 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar protein FliS YP_002479118.1 637241 R 525146 CDS YP_002479119.1 220903807 7284197 complement(638041..641118) 1 NC_011883.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: dvl:Dvul_2119 flagellar hook-associated 2 domain-containing protein; flagellar hook-associated 2 domain-containing protein 641118 7284197 Ddes_0530 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar hook-associated 2 domain-containing protein YP_002479119.1 638041 R 525146 CDS YP_002479120.1 220903808 7284198 641693..642859 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_2296 hypothetical protein; major facilitator superfamily transporter 642859 7284198 Ddes_0531 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily transporter YP_002479120.1 641693 D 525146 CDS YP_002479121.1 220903809 7284199 complement(643249..644097) 1 NC_011883.1 PFAM: VacJ family lipoprotein; KEGG: dvl:Dvul_1820 VacJ family lipoprotein; VacJ family lipoprotein 644097 7284199 Ddes_0532 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 VacJ family lipoprotein YP_002479121.1 643249 R 525146 CDS YP_002479122.1 220903810 7284200 complement(644087..644731) 1 NC_011883.1 PFAM: toluene tolerance family protein; KEGG: dvl:Dvul_1819 toluene tolerance family protein; toluene tolerance family protein 644731 7284200 Ddes_0533 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 toluene tolerance family protein YP_002479122.1 644087 R 525146 CDS YP_002479123.1 220903811 7284201 complement(644734..645186) 1 NC_011883.1 PFAM: Mammalian cell entry related domain protein; KEGG: dvl:Dvul_1818 hypothetical protein; mammalian cell entry domain-containing protein 645186 7284201 Ddes_0534 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 mammalian cell entry domain-containing protein YP_002479123.1 644734 R 525146 CDS YP_002479124.1 220903812 7284202 complement(645658..646473) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1817 ABC transporter related; ABC transporter-like protein 646473 7284202 Ddes_0535 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479124.1 645658 R 525146 CDS YP_002479125.1 220903813 7284203 complement(646886..647623) 1 NC_011883.1 PFAM: protein of unknown function DUF28; KEGG: dvu:DVU2259 hypothetical protein; hypothetical protein 647623 7284203 Ddes_0536 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479125.1 646886 R 525146 CDS YP_002479126.1 220903814 7284204 complement(647657..648328) 1 NC_011883.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dvl:Dvul_0985 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 648328 7284204 Ddes_0537 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribosomal RNA methyltransferase RrmJ/FtsJ YP_002479126.1 647657 R 525146 CDS YP_002479127.1 220903815 7284205 648471..649007 1 NC_011883.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: mag:amb2978 Cu/Zn superoxide dismutase; copper/zinc binding superoxide dismutase 649007 7284205 Ddes_0538 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 copper/zinc binding superoxide dismutase YP_002479127.1 648471 D 525146 CDS YP_002479128.1 220903816 7284206 649140..650906 1 NC_011883.1 KEGG: dvl:Dvul_0984 hypothetical protein; hypothetical protein 650906 7284206 Ddes_0539 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479128.1 649140 D 525146 CDS YP_002479129.1 220903817 7284208 651533..652624 1 NC_011883.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tbd:Tbd_1780 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 652624 7284208 Ddes_0540 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dTDP-glucose 4,6-dehydratase YP_002479129.1 651533 D 525146 CDS YP_002479130.1 220903818 7284209 652621..653514 1 NC_011883.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pcr:Pcryo_0625 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 653514 7284209 Ddes_0541 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glucose-1-phosphate thymidylyltransferase YP_002479130.1 652621 D 525146 CDS YP_002479131.1 220903819 7284210 653505..654044 1 NC_011883.1 KEGG: lip:LIC004 dTDP-6-deoxy-D-glucose-3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 654044 7284210 Ddes_0542 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002479131.1 653505 D 525146 CDS YP_002479132.1 220903820 7284211 complement(654309..654752) 1 NC_011883.1 PFAM: protein of unknown function DUF302; KEGG: rde:RD1_1777 hypothetical protein; hypothetical protein 654752 7284211 Ddes_0543 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479132.1 654309 R 525146 CDS YP_002479133.1 220903821 7284212 655422..656861 1 NC_011883.1 KEGG: dvu:DVU3143 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 656861 7284212 Ddes_0544 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 iron-sulfur cluster-binding protein YP_002479133.1 655422 D 525146 CDS YP_002479134.1 220903822 7284213 complement(657089..658228) 1 NC_011883.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dvl:Dvul_0706 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 658228 7284213 Ddes_0545 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-hydroxyglutaryl-CoA dehydratase subunit D YP_002479134.1 657089 R 525146 CDS YP_002479135.1 220903823 7284214 complement(658274..659065) 1 NC_011883.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: dvl:Dvul_0705 putative CoA-substrate-specific enzyme activase; CoA-substrate-specific enzyme activase 659065 7284214 Ddes_0546 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CoA-substrate-specific enzyme activase YP_002479135.1 658274 R 525146 CDS YP_002479136.1 220903824 7284216 complement(659852..662230) 1 NC_011883.1 KEGG: dvl:Dvul_1843 glycosyl transferase family protein; 4-amino-4-deoxy-L-arabinose transferase-like protein 662230 7284216 Ddes_0548 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4-amino-4-deoxy-L-arabinose transferase-like protein YP_002479136.1 659852 R 525146 CDS YP_002479137.1 220903825 7284217 complement(662227..664437) 1 NC_011883.1 KEGG: dvl:Dvul_1839 hypothetical protein; hypothetical protein 664437 7284217 Ddes_0549 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479137.1 662227 R 525146 CDS YP_002479138.1 220903826 7284218 complement(664527..665324) 1 NC_011883.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 665324 mazG 7284218 mazG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nucleoside triphosphate pyrophosphohydrolase YP_002479138.1 664527 R 525146 CDS YP_002479139.1 220903827 7284219 complement(665499..665627) 1 NC_011883.1 hypothetical protein 665627 7284219 Ddes_0551 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479139.1 665499 R 525146 CDS YP_002479140.1 220903828 7284220 complement(665647..666135) 1 NC_011883.1 PFAM: Colicin V production protein; KEGG: dvl:Dvul_1872 colicin V production protein; colicin V production protein 666135 7284220 Ddes_0552 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 colicin V production protein YP_002479140.1 665647 R 525146 CDS YP_002479141.1 220903829 7284221 666425..667093 1 NC_011883.1 KEGG: dvu:DVU0579 molybdopterin-guanine dinucleotide biosynthesis protein A, putative; molybdopterin-guanine dinucleotide biosynthesis protein A 667093 7284221 Ddes_0553 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002479141.1 666425 D 525146 CDS YP_002479142.1 220903830 7284222 667310..668989 1 NC_011883.1 PFAM: molybdopterin binding domain; formylmethanofuran dehydrogenase subunit E region; KEGG: dvl:Dvul_2793 molybdopterin binding domain-containing protein; formylmethanofuran dehydrogenase subunit E 668989 7284222 Ddes_0554 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formylmethanofuran dehydrogenase subunit E YP_002479142.1 667310 D 525146 CDS YP_002479143.1 220903831 7284223 669447..672485 1 NC_011883.1 KEGG: dvu:DVU2812 formate dehydrogenase, alpha subunit, selenocysteine-containing; Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; formate dehydrogenase subunit alpha 672485 7284223 Ddes_0555 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formate dehydrogenase subunit alpha YP_002479143.1 669447 D 525146 CDS YP_002479144.1 220903832 7284224 672535..673194 1 NC_011883.1 KEGG: dvl:Dvul_0502 formate dehydrogenase, beta subunit, putative; formate dehydrogenase subunit beta 673194 7284224 Ddes_0556 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formate dehydrogenase subunit beta YP_002479144.1 672535 D 525146 CDS YP_002479145.1 220903833 7284225 673505..674482 1 NC_011883.1 PFAM: formate dehydrogenase accessory protein; KEGG: dvl:Dvul_0503 formate dehydrogenase formation protein FdhE, putative; formate dehydrogenase accessory protein 674482 7284225 Ddes_0557 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formate dehydrogenase accessory protein YP_002479145.1 673505 D 525146 CDS YP_002479146.1 220903834 7284226 674928..675371 1 NC_011883.1 PFAM: cytochrome c class III; KEGG: dvl:Dvul_0504 cytochrome c, class III; cytochrome c class III 675371 7284226 Ddes_0558 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c class III YP_002479146.1 674928 D 525146 CDS YP_002479147.1 220903835 7284231 complement(676786..678090) 1 NC_011883.1 KEGG: dvl:Dvul_1519 phenylacetate--CoA ligase; phenylacetate--CoA ligase 678090 7284231 Ddes_0559 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phenylacetate--CoA ligase YP_002479147.1 676786 R 525146 CDS YP_002479148.1 220903836 7284232 678422..678853 1 NC_011883.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: dvl:Dvul_1517 iojap-like protein; iojap family protein 678853 7284232 Ddes_0560 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 iojap family protein YP_002479148.1 678422 D 525146 CDS YP_002479149.1 220903837 7284233 678858..680423 1 NC_011883.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 680423 7284233 Ddes_0561 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoglyceromutase YP_002479149.1 678858 D 525146 CDS YP_002479150.1 220903838 7284234 680416..680658 1 NC_011883.1 KEGG: dvl:Dvul_1515 hypothetical protein; hypothetical protein 680658 7284234 Ddes_0562 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479150.1 680416 D 525146 CDS YP_002479151.1 220903839 7284235 680929..682461 1 NC_011883.1 KEGG: dvl:Dvul_2176 hypothetical protein; hypothetical protein 682461 7284235 Ddes_0563 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479151.1 680929 D 525146 CDS YP_002479152.1 220903840 7284236 complement(683055..683975) 1 NC_011883.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_2888 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 683975 7284236 Ddes_0564 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate ABC transporter permease YP_002479152.1 683055 R 525146 CDS YP_002479153.1 220903841 7284237 complement(684002..684892) 1 NC_011883.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_2887 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease 684892 7284237 Ddes_0565 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate ABC transporter permease YP_002479153.1 684002 R 525146 CDS YP_002479154.1 220903842 7284238 complement(685007..685855) 1 NC_011883.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sat:SYN_00056 ABC-type phosphate transport system, periplasmic component; phosphate binding protein 685855 7284238 Ddes_0566 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate binding protein YP_002479154.1 685007 R 525146 CDS YP_002479155.1 220903843 7284239 686249..686926 1 NC_011883.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dvl:Dvul_1911 two component transcriptional regulator; winged helix family two component transcriptional regulator 686926 7284239 Ddes_0567 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 winged helix family two component transcriptional regulator YP_002479155.1 686249 D 525146 CDS YP_002479156.1 220903844 7284240 687006..689015 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: scl:sce3423 sensory box histidine kinase PhoR; histidine kinase 689015 7284240 Ddes_0568 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine kinase YP_002479156.1 687006 D 525146 CDS YP_002479157.1 220903845 7284241 689018..689773 1 NC_011883.1 KEGG: dol:Dole_1928 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 689773 7284241 Ddes_0569 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate ABC transporter ATPase YP_002479157.1 689018 D 525146 CDS YP_002479158.1 220903846 7284242 689966..690775 1 NC_011883.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: scl:sce2942 phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 690775 7284242 Ddes_0570 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate uptake regulator PhoU YP_002479158.1 689966 D 525146 CDS YP_002479159.1 220903847 7284243 690817..691449 1 NC_011883.1 PFAM: protein of unknown function UPF0153; KEGG: tye:THEYE_A0258 hypothetical protein; hypothetical protein 691449 7284243 Ddes_0571 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479159.1 690817 D 525146 CDS YP_002479160.1 220903848 7284244 complement(691772..692581) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00367 sulfate transport ATP-binding protein; ABC transporter-like protein 692581 7284244 Ddes_0572 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479160.1 691772 R 525146 CDS YP_002479161.1 220903849 7284245 complement(692560..693393) 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sat:SYN_00366 sulfate transport system permease protein; binding-protein-dependent transport system inner membrane protein 693393 7284245 Ddes_0573 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002479161.1 692560 R 525146 CDS YP_002479162.1 220903850 7284246 complement(693551..694645) 1 NC_011883.1 KEGG: sat:SYN_00365 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 694645 7284246 Ddes_0574 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_002479162.1 693551 R 525146 CDS YP_002479163.1 220903851 7284247 complement(694769..695659) 1 NC_011883.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sfu:Sfum_1011 nitrogenase cofactor biosynthesis protein NifB; radical SAM protein 695659 7284247 Ddes_0575 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002479163.1 694769 R 525146 CDS YP_002479164.1 220903852 7284248 complement(695656..696432) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1960 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 696432 7284248 Ddes_0576 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479164.1 695656 R 525146 CDS YP_002479165.1 220903853 7284249 complement(696422..697276) 1 NC_011883.1 KEGG: sfu:Sfum_1959 putative molybdenum ABC transporter, solute-binding protein; putative molybdenum ABC transporter solute-binding protein 697276 7284249 Ddes_0577 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative molybdenum ABC transporter solute-binding protein YP_002479165.1 696422 R 525146 CDS YP_002479166.1 220903854 7284250 complement(698104..700710) 1 NC_011883.1 KEGG: dvl:Dvul_1290 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 700710 7284250 Ddes_0578 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent chaperone ClpB YP_002479166.1 698104 R 525146 CDS YP_002479167.1 220903855 7284251 complement(701090..701404) 1 NC_011883.1 KEGG: lip:LI0125 hypothetical protein; hypothetical protein 701404 7284251 Ddes_0579 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479167.1 701090 R 525146 CDS YP_002479168.1 220903856 7284252 complement(701425..702399) 1 NC_011883.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: dvl:Dvul_1288 chaperone DnaJ domain-containing protein; chaperone DnaJ domain-containing protein 702399 7284252 Ddes_0580 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chaperone DnaJ domain-containing protein YP_002479168.1 701425 R 525146 CDS YP_002479169.1 220903857 7284253 complement(702956..705019) 1 NC_011883.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 705019 uvrC 7284253 uvrC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 excinuclease ABC subunit C YP_002479169.1 702956 R 525146 CDS YP_002479170.1 220903858 7284254 complement(705738..707255) 1 NC_011883.1 KEGG: dvu:DVU0799 hypothetical protein; hypothetical protein 707255 7284254 Ddes_0582 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479170.1 705738 R 525146 CDS YP_002479171.1 220903859 7284255 complement(707768..708979) 1 NC_011883.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 708979 7284255 Ddes_0583 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tryptophan synthase subunit beta YP_002479171.1 707768 R 525146 CDS YP_002479172.1 220903860 7284256 709285..710088 1 NC_011883.1 PFAM: thymidylate synthase complementing protein ThyX; KEGG: gbm:Gbem_3711 thymidylate synthase, flavin-dependent; thymidylate synthase complementing protein ThyX 710088 7284256 Ddes_0584 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thymidylate synthase complementing protein ThyX YP_002479172.1 709285 D 525146 CDS YP_002479173.1 220903861 7284258 complement(710781..712160) 1 NC_011883.1 PFAM: O-antigen polymerase; KEGG: lip:LI0825 lipid A core-O-antigen ligase and related enzymes; O-antigen polymerase 712160 7284258 Ddes_0586 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 O-antigen polymerase YP_002479173.1 710781 R 525146 CDS YP_002479174.1 220903862 7284259 712317..713039 1 NC_011883.1 PFAM: protein of unknown function DUF88; KEGG: dvl:Dvul_1187 hypothetical protein; hypothetical protein 713039 7284259 Ddes_0587 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479174.1 712317 D 525146 CDS YP_002479175.1 220903863 7284260 713268..714011 1 NC_011883.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: lip:LI0129 amino acid ABC transporter, periplasmic amino acid-binding protein; family 3 extracellular solute-binding protein 714011 7284260 Ddes_0588 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 3 extracellular solute-binding protein YP_002479175.1 713268 D 525146 CDS YP_002479176.1 220903864 7284261 714067..714810 1 NC_011883.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: lip:LI0129 amino acid ABC transporter, periplasmic amino acid-binding protein; family 3 extracellular solute-binding protein 714810 7284261 Ddes_0589 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 3 extracellular solute-binding protein YP_002479176.1 714067 D 525146 CDS YP_002479177.1 220903865 7284262 714892..715692 1 NC_011883.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_1825 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 715692 7284262 Ddes_0590 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polar amino acid ABC transporter inner membrane subunit YP_002479177.1 714892 D 525146 CDS YP_002479178.1 220903866 7284263 715679..716446 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1826 ABC transporter related; ABC transporter-like protein 716446 7284263 Ddes_0591 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479178.1 715679 D 525146 CDS YP_002479179.1 220903867 7284264 716595..717872 1 NC_011883.1 PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: dvl:Dvul_2170 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 717872 7284264 Ddes_0592 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_002479179.1 716595 D 525146 CDS YP_002479180.1 220903868 7284265 complement(718060..719067) 1 NC_011883.1 KEGG: dvl:Dvul_0631 hypothetical protein; hypothetical protein 719067 7284265 Ddes_0593 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479180.1 718060 R 525146 CDS YP_002479181.1 220903869 7284266 complement(719151..720371) 1 NC_011883.1 PFAM: sodium/calcium exchanger membrane region; KEGG: dvl:Dvul_0633 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane protein 720371 7284266 Ddes_0594 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sodium/calcium exchanger membrane protein YP_002479181.1 719151 R 525146 CDS YP_002479182.1 220903870 7284267 720681..721967 1 NC_011883.1 KEGG: dvl:Dvul_2123 hypothetical protein; hypothetical protein 721967 7284267 Ddes_0595 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479182.1 720681 D 525146 CDS YP_002479183.1 220903871 7284268 722279..723064 1 NC_011883.1 KEGG: dvl:Dvul_2125 putative lipoprotein; hypothetical protein 723064 7284268 Ddes_0596 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479183.1 722279 D 525146 CDS YP_002479184.1 220903872 7284269 723031..723783 1 NC_011883.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_0906 tRNA guanosine-2'-O-methyltransferase; tRNA guanosine-2'-O-methyltransferase 723783 7284269 Ddes_0597 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA guanosine-2'-O-methyltransferase YP_002479184.1 723031 D 525146 CDS YP_002479185.1 220903873 7284270 complement(723926..724516) 1 NC_011883.1 PFAM: cyclase family protein; KEGG: cbe:Cbei_0277 cyclase family protein; cyclase family protein 724516 7284270 Ddes_0598 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cyclase family protein YP_002479185.1 723926 R 525146 CDS YP_002479186.1 220903874 7284271 724629..725153 1 NC_011883.1 PFAM: regulatory protein MarR; KEGG: mma:MM_1903 MarR family transcriptional regulator; MarR family transcriptional regulator 725153 7284271 Ddes_0599 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MarR family transcriptional regulator YP_002479186.1 724629 D 525146 CDS YP_002479187.1 220903875 7284272 complement(725224..725859) 1 NC_011883.1 KEGG: dvl:Dvul_1183 hypothetical protein; hypothetical protein 725859 7284272 Ddes_0600 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479187.1 725224 R 525146 CDS YP_002479188.1 220903876 7284273 726076..729036 1 NC_011883.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: dvl:Dvul_1185 excinuclease ABC, A subunit; excinuclease ABC subunit A 729036 7284273 Ddes_0601 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 excinuclease ABC subunit A YP_002479188.1 726076 D 525146 CDS YP_002479189.1 220903877 7284274 complement(729384..729950) 1 NC_011883.1 TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cpf:CPF_0784 alkyl hydroperoxide reductase, C subunit; peroxiredoxin 729950 7284274 Ddes_0602 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peroxiredoxin YP_002479189.1 729384 R 525146 CDS YP_002479190.1 220903878 7284275 730348..730812 1 NC_011883.1 PFAM: ferric-uptake regulator; KEGG: scl:sce0007 ferric uptake regulation protein; Fur family ferric uptake regulator 730812 7284275 Ddes_0603 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fur family ferric uptake regulator YP_002479190.1 730348 D 525146 CDS YP_002479191.1 220903879 7284276 731165..731410 1 NC_011883.1 hypothetical protein 731410 7284276 Ddes_0604 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479191.1 731165 D 525146 CDS YP_002479192.1 220903880 7284277 complement(731851..732285) 1 NC_011883.1 PFAM: thioesterase superfamily protein; KEGG: dvl:Dvul_2098 thioesterase superfamily protein; thioesterase superfamily protein 732285 7284277 Ddes_0605 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thioesterase superfamily protein YP_002479192.1 731851 R 525146 CDS YP_002479193.1 220903881 7284278 732376..733452 1 NC_011883.1 PFAM: MltA domain protein; 3D domain protein; KEGG: dvl:Dvul_2097 MltA domain-containing protein; MltA domain-containing protein 733452 7284278 Ddes_0606 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MltA domain-containing protein YP_002479193.1 732376 D 525146 CDS YP_002479194.1 220903882 7284279 complement(733571..734038) 1 NC_011883.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: dvl:Dvul_0895 Fis family transcriptional regulator; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 734038 7284279 Ddes_0607 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_002479194.1 733571 R 525146 CDS YP_002479195.1 220903883 7284280 complement(734334..734879) 1 NC_011883.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: dvl:Dvul_0893 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 734879 7284280 Ddes_0608 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane chaperone Skp YP_002479195.1 734334 R 525146 CDS YP_002479196.1 220903884 7284281 complement(735085..737511) 1 NC_011883.1 PFAM: cell wall hydrolase/autolysin; KEGG: dvu:DVU2371 N-acetylmuramoyl-L-alanine amidase, putative; N-acetylmuramoyl-L-alanine amidase 737511 7284281 Ddes_0609 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetylmuramoyl-L-alanine amidase YP_002479196.1 735085 R 525146 CDS YP_002479197.1 220903885 7284282 complement(737717..738049) 1 NC_011883.1 PFAM: Protein of unknown function CGGC region; KEGG: cbf:CLI_0908 CGGC domain-containing protein; hypothetical protein 738049 7284282 Ddes_0610 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479197.1 737717 R 525146 CDS YP_002479198.1 220903886 7284283 complement(738278..741040) 1 NC_011883.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: dvl:Dvul_0891 surface antigen (D15); outer membrane protein assembly complex, YaeT protein 741040 7284283 Ddes_0611 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane protein assembly complex, YaeT protein YP_002479198.1 738278 R 525146 CDS YP_002479199.1 220903887 7284284 complement(741021..741707) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_0890 ABC transporter related; ABC transporter-like protein 741707 7284284 Ddes_0612 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479199.1 741021 R 525146 CDS YP_002479200.1 220903888 7284285 complement(741710..742945) 1 NC_011883.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: dvl:Dvul_0889 LolC/E family lipoprotein releasing system, transmembrane protein; lipoprotein releasing system transmembrane protein LolC/E family 742945 7284285 Ddes_0613 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lipoprotein releasing system transmembrane protein LolC/E family YP_002479200.1 741710 R 525146 CDS YP_002479201.1 220903889 7284286 743742..744314 1 NC_011883.1 KEGG: hsm:HSM_1276 NapC/NirT cytochrome c domain-containing protein; NapC/NirT cytochrome c domain-containing protein 744314 7284286 Ddes_0614 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NapC/NirT cytochrome c domain-containing protein YP_002479201.1 743742 D 525146 CDS YP_002479202.1 220903890 7284287 744311..744757 1 NC_011883.1 KEGG: ade:Adeh_0909 hypothetical protein; hypothetical protein 744757 7284287 Ddes_0615 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479202.1 744311 D 525146 CDS YP_002479203.1 220903891 7284288 744896..747163 1 NC_011883.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ade:Adeh_0908 periplasmic nitrate reductase subunit NapA apoprotein; molybdopterin oxidoreductase 747163 7284288 Ddes_0616 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdopterin oxidoreductase YP_002479203.1 744896 D 525146 CDS YP_002479204.1 220903892 7284289 747172..747501 1 NC_011883.1 hypothetical protein 747501 7284289 Ddes_0617 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479204.1 747172 D 525146 CDS YP_002479205.1 220903893 7284290 747498..748022 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY4077 hypothetical protein; 4Fe-4S ferredoxin 748022 7284290 Ddes_0618 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479205.1 747498 D 525146 CDS YP_002479206.1 220903894 7284291 748019..748918 1 NC_011883.1 KEGG: shl:Shal_0713 quinol dehydrogenase membrane component; quinol dehydrogenase membrane component 748918 7284291 Ddes_0619 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 quinol dehydrogenase membrane component YP_002479206.1 748019 D 525146 CDS YP_002479207.1 220903895 7284292 complement(749116..750627) 1 NC_011883.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dvl:Dvul_0888 lysyl-tRNA synthetase; lysyl-tRNA synthetase 750627 7284292 Ddes_0620 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lysyl-tRNA synthetase YP_002479207.1 749116 R 525146 CDS YP_002479208.1 220903896 7284293 750911..751474 1 NC_011883.1 PFAM: amino acid-binding ACT domain protein; KEGG: sfu:Sfum_2949 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 751474 7284293 Ddes_0621 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid-binding ACT domain-containing protein YP_002479208.1 750911 D 525146 CDS YP_002479209.1 220903897 7284294 751627..753012 1 NC_011883.1 PFAM: protein of unknown function DUF711; KEGG: lip:LI0872 hypothetical protein; hypothetical protein 753012 7284294 Ddes_0622 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479209.1 751627 D 525146 CDS YP_002479210.1 220903898 7284295 753237..753563 1 NC_011883.1 hypothetical protein 753563 7284295 Ddes_0623 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479210.1 753237 D 525146 CDS YP_002479211.1 220903899 7284296 complement(753560..754072) 1 NC_011883.1 hypothetical protein 754072 7284296 Ddes_0624 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479211.1 753560 R 525146 CDS YP_002479212.1 220903900 7284297 754138..754548 1 NC_011883.1 PFAM: protein of unknown function DUF1090; KEGG: ypb:YPTS_3669 hypothetical protein; hypothetical protein 754548 7284297 Ddes_0625 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479212.1 754138 D 525146 CDS YP_002479213.1 220903901 7284298 complement(754650..755435) 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: ppf:Pput_0520 hypothetical protein; hypothetical protein 755435 7284298 Ddes_0626 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479213.1 754650 R 525146 CDS YP_002479214.1 220903902 7284299 complement(755437..756027) 1 NC_011883.1 PFAM: protein of unknown function DUF486; KEGG: dvl:Dvul_0419 hypothetical protein; hypothetical protein 756027 7284299 Ddes_0627 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479214.1 755437 R 525146 CDS YP_002479215.1 220903903 7284300 complement(756204..757484) 1 NC_011883.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 757484 7284300 Ddes_0628 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine biosynthesis protein ThiC YP_002479215.1 756204 R 525146 CDS YP_002479216.1 220903904 7284301 757912..759285 1 NC_011883.1 PFAM: cation transporter; KEGG: dvu:DVU0413 TrkH family potassium uptake protein; H(+)-transporting two-sector ATPase 759285 7284301 Ddes_0629 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 H(+)-transporting two-sector ATPase YP_002479216.1 757912 D 525146 CDS YP_002479217.1 220903905 7284302 759543..760202 1 NC_011883.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: dvl:Dvul_2522 TrkA domain-containing protein; TrkA-N domain-containing protein 760202 7284302 Ddes_0630 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TrkA-N domain-containing protein YP_002479217.1 759543 D 525146 CDS YP_002479218.1 220903906 7284303 complement(760375..761409) 1 NC_011883.1 PFAM: protein of unknown function DUF45; KEGG: cli:Clim_1657 protein of unknown function DUF45; hypothetical protein 761409 7284303 Ddes_0631 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479218.1 760375 R 525146 CDS YP_002479219.1 220903907 7284304 761658..762149 1 NC_011883.1 KEGG: LOC686844; hypothetical protein LOC686844; hypothetical protein 762149 7284304 Ddes_0632 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479219.1 761658 D 525146 CDS YP_002479220.1 220903908 7284305 762281..762856 1 NC_011883.1 PFAM: Rubrerythrin; KEGG: lip:LI0696 rubrerythrin; rubrerythrin 762856 7284305 Ddes_0633 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rubrerythrin YP_002479220.1 762281 D 525146 CDS YP_002479221.1 220903909 7284306 763837..765240 1 NC_011883.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: dvl:Dvul_1978 TolC family type I secretion outer membrane protein; TolC family type I secretion outer membrane protein 765240 7284306 Ddes_0634 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TolC family type I secretion outer membrane protein YP_002479221.1 763837 D 525146 CDS YP_002479222.1 220903910 7284307 765507..768269 1 NC_011883.1 KEGG: dvl:Dvul_1977 ABC transporter related; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 768269 7284307 Ddes_0635 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type I secretion system ATPase YP_002479222.1 765507 D 525146 CDS YP_002479223.1 220903911 7284308 768271..770295 1 NC_011883.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dvl:Dvul_1976 HlyD family type I secretion membrane fusion protein; HlyD family type I secretion membrane fusion protein 770295 7284308 Ddes_0636 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HlyD family type I secretion membrane fusion protein YP_002479223.1 768271 D 525146 CDS YP_002479224.1 220903912 7284309 770317..772467 1 NC_011883.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: dvl:Dvul_1974 putative PAS/PAC sensor protein; putative PAS/PAC sensor protein 772467 7284309 Ddes_0637 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative PAS/PAC sensor protein YP_002479224.1 770317 D 525146 CDS YP_002479225.1 220903913 7284310 772479..773699 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4925 glycosyl transferase, group 1; group 1 glycosyl transferase 773699 7284310 Ddes_0638 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002479225.1 772479 D 525146 CDS YP_002479226.1 220903914 7284311 complement(774019..776901) 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; extracellular solute-binding protein family 3; KEGG: cdf:CD1476 putative signaling protein; diguanylate cyclase/phosphodiesterase 776901 7284311 Ddes_0639 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase/phosphodiesterase YP_002479226.1 774019 R 525146 CDS YP_002479227.1 220903915 7284312 777790..778104 1 NC_011883.1 PFAM: helix-turn-helix domain protein; KEGG: hau:Haur_2753 XRE family transcriptional regulator; XRE family transcriptional regulator 778104 7284312 Ddes_0640 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002479227.1 777790 D 525146 CDS YP_002479228.1 220903916 7284313 complement(778155..779267) 1 NC_011883.1 PFAM: aminotransferase class V; KEGG: ade:Adeh_2994 alanine-glyoxylate aminotransferase; alanine--glyoxylate transaminase 779267 7284313 Ddes_0641 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alanine--glyoxylate transaminase YP_002479228.1 778155 R 525146 CDS YP_002479229.1 220903917 7284314 779566..780945 1 NC_011883.1 PFAM: amino acid permease-associated region; KEGG: pae:PA3000 aromatic amino acid transport protein AroP1; amino acid permease-associated protein 780945 7284314 Ddes_0642 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid permease-associated protein YP_002479229.1 779566 D 525146 CDS YP_002479230.1 220903918 7284315 781233..782126 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_2613 hypothetical protein; hypothetical protein 782126 7284315 Ddes_0643 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479230.1 781233 D 525146 CDS YP_002479231.1 220903919 7284316 782699..782923 1 NC_011883.1 PFAM: FeoA family protein; KEGG: rrs:RoseRS_0553 FeoA family protein; FeoA family protein 782923 7284316 Ddes_0644 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FeoA family protein YP_002479231.1 782699 D 525146 CDS YP_002479232.1 220903920 7284317 782938..783162 1 NC_011883.1 PFAM: FeoA family protein; KEGG: afw:Anae109_4104 FeoA family protein; FeoA family protein 783162 7284317 Ddes_0645 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FeoA family protein YP_002479232.1 782938 D 525146 CDS YP_002479233.1 220903921 7284318 783159..785639 1 NC_011883.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: abu:Abu_1854 ferrous iron transport protein B; small GTP-binding protein 785639 7284318 Ddes_0646 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small GTP-binding protein YP_002479233.1 783159 D 525146 CDS YP_002479234.1 220903922 7284319 785658..785975 1 NC_011883.1 KEGG: abu:Abu_1855 hypothetical protein; hypothetical protein 785975 7284319 Ddes_0647 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479234.1 785658 D 525146 CDS YP_002479235.1 220903923 7284320 786041..786865 1 NC_011883.1 KEGG: rpc:RPC_1958 hypothetical protein; hypothetical protein 786865 7284320 Ddes_0648 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479235.1 786041 D 525146 CDS YP_002479236.1 220903924 7284321 complement(787168..789597) 1 NC_011883.1 KEGG: drm:Dred_3287 hypothetical protein; hypothetical protein 789597 7284321 Ddes_0649 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479236.1 787168 R 525146 CDS YP_002479237.1 220903925 7284323 complement(790753..791400) 1 NC_011883.1 PFAM: protein of unknown function DUF615; KEGG: lch:Lcho_1222 hypothetical protein; hypothetical protein 791400 7284323 Ddes_0650 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479237.1 790753 R 525146 CDS YP_002479238.1 220903926 7284324 complement(791427..792338) 1 NC_011883.1 TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: dvl:Dvul_2015 4-hydroxybenzoate polyprenyltransferase, putative; 4-hydroxybenzoate polyprenyltransferase 792338 7284324 Ddes_0651 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4-hydroxybenzoate polyprenyltransferase YP_002479238.1 791427 R 525146 CDS YP_002479239.1 220903927 7284325 complement(792487..793293) 1 NC_011883.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: dvl:Dvul_2017 molybdenum cofactor synthesis domain-containing protein; molybdenum cofactor synthesis domain-containing protein 793293 7284325 Ddes_0652 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdenum cofactor synthesis domain-containing protein YP_002479239.1 792487 R 525146 CDS YP_002479240.1 220903928 7284326 793446..793949 1 NC_011883.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 793949 7284326 Ddes_0653 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 7-cyano-7-deazaguanine reductase YP_002479240.1 793446 D 525146 CDS YP_002479241.1 220903929 7284327 794033..795763 1 NC_011883.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: dvu:DVU3063 integral membrane protein MviN; integral membrane protein MviN 795763 7284327 Ddes_0654 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integral membrane protein MviN YP_002479241.1 794033 D 525146 CDS YP_002479242.1 220903930 7284328 795785..796870 1 NC_011883.1 KEGG: dvl:Dvul_0315 multi-sensor hybrid histidine kinase; hypothetical protein 796870 7284328 Ddes_0655 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479242.1 795785 D 525146 CDS YP_002479243.1 220903931 7284329 797089..798732 1 NC_011883.1 KEGG: dvl:Dvul_0317 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 798732 7284329 Ddes_0656 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 signal recognition particle-docking protein FtsY YP_002479243.1 797089 D 525146 CDS YP_002479244.1 220903932 7284330 complement(798928..800289) 1 NC_011883.1 PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0431 response regulator receiver; hypothetical protein 800289 7284330 Ddes_0657 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479244.1 798928 R 525146 CDS YP_002479245.1 220903933 7284331 800532..800876 1 NC_011883.1 hypothetical protein 800876 7284331 Ddes_0658 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479245.1 800532 D 525146 CDS YP_002479246.1 220903934 7284332 801034..801351 1 NC_011883.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 801351 rpsJ 7284332 rpsJ Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S10 YP_002479246.1 801034 D 525146 CDS YP_002479247.1 220903935 7284334 802006..802638 1 NC_011883.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 802638 rplD 7284334 rplD Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L4 YP_002479247.1 802006 D 525146 CDS YP_002479248.1 220903936 7284335 802641..802931 1 NC_011883.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 802931 rplW 7284335 rplW Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L23 YP_002479248.1 802641 D 525146 CDS YP_002479249.1 220903937 7284336 802934..803782 1 NC_011883.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 803782 rplB 7284336 rplB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L2 YP_002479249.1 802934 D 525146 CDS YP_002479250.1 220903938 7284337 803792..804076 1 NC_011883.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 804076 rpsS 7284337 rpsS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S19 YP_002479250.1 803792 D 525146 CDS YP_002479251.1 220903939 7284338 804086..804424 1 NC_011883.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 804424 rplV 7284338 rplV Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L22 YP_002479251.1 804086 D 525146 CDS YP_002479252.1 220903940 7284339 804428..805069 1 NC_011883.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 805069 rpsC 7284339 rpsC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S3 YP_002479252.1 804428 D 525146 CDS YP_002479253.1 220903941 7284340 805069..805482 1 NC_011883.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 805482 rplP 7284340 rplP Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L16 YP_002479253.1 805069 D 525146 CDS YP_002479254.1 220903942 7284341 805482..805712 1 NC_011883.1 PFAM: ribosomal protein L29; KEGG: dvl:Dvul_1757 50S ribosomal protein L29; 50S ribosomal protein L29 805712 7284341 Ddes_0668 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L29 YP_002479254.1 805482 D 525146 CDS YP_002479255.1 220903943 7284342 805714..805977 1 NC_011883.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 805977 rpsQ 7284342 rpsQ Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S17 YP_002479255.1 805714 D 525146 CDS YP_002479256.1 220903944 7284343 805987..806355 1 NC_011883.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 806355 rplN 7284343 rplN Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L14 YP_002479256.1 805987 D 525146 CDS YP_002479257.1 220903945 7284344 806365..806697 1 NC_011883.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 806697 rplX 7284344 rplX Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L24 YP_002479257.1 806365 D 525146 CDS YP_002479258.1 220903946 7284345 806707..807246 1 NC_011883.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 807246 rplE 7284345 rplE Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L5 YP_002479258.1 806707 D 525146 CDS YP_002479259.1 220903947 7284346 807257..807442 1 NC_011883.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 807442 rpsN 7284346 rpsN Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S14 YP_002479259.1 807257 D 525146 CDS YP_002479260.1 220903948 7284347 807546..807926 1 NC_011883.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 807926 rpsH 7284347 rpsH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S8 YP_002479260.1 807546 D 525146 CDS YP_002479261.1 220903949 7284348 807938..808477 1 NC_011883.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 808477 rplF 7284348 rplF Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L6 YP_002479261.1 807938 D 525146 CDS YP_002479262.1 220903950 7284349 808488..808847 1 NC_011883.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 808847 rplR 7284349 rplR Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L18 YP_002479262.1 808488 D 525146 CDS YP_002479263.1 220903951 7284350 808849..809361 1 NC_011883.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 809361 rpsE 7284350 rpsE Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S5 YP_002479263.1 808849 D 525146 CDS YP_002479264.1 220903952 7284351 809364..809540 1 NC_011883.1 PFAM: ribosomal protein L30; KEGG: amt:Amet_4460 ribosomal protein L30; 50S ribosomal protein L30 809540 7284351 Ddes_0678 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L30 YP_002479264.1 809364 D 525146 CDS YP_002479265.1 220903953 7284352 809560..810021 1 NC_011883.1 late assembly protein; 50S ribosomal protein L15 810021 rplO 7284352 rplO Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L15 YP_002479265.1 809560 D 525146 CDS YP_002479266.1 220903954 7284353 810248..811561 1 NC_011883.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 811561 secY 7284353 secY Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 preprotein translocase subunit SecY YP_002479266.1 810248 D 525146 CDS YP_002479267.1 220903955 7284354 811579..812373 1 NC_011883.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: dvl:Dvul_1744 methionine aminopeptidase, type I; methionine aminopeptidase 812373 7284354 Ddes_0681 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methionine aminopeptidase YP_002479267.1 811579 D 525146 CDS YP_002479268.1 220903956 7284355 812511..812624 1 NC_011883.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 812624 rpmJ 7284355 rpmJ Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L36 YP_002479268.1 812511 D 525146 CDS YP_002479269.1 220903957 7284356 812640..813008 1 NC_011883.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 813008 rpsM 7284356 rpsM Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S13 YP_002479269.1 812640 D 525146 CDS YP_002479270.1 220903958 7284357 813133..813522 1 NC_011883.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 813522 7284357 Ddes_0684 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S11 YP_002479270.1 813133 D 525146 CDS YP_002479271.1 220903959 7284358 813567..814193 1 NC_011883.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 814193 rpsD 7284358 rpsD Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S4 YP_002479271.1 813567 D 525146 CDS YP_002479272.1 220903960 7284359 814206..815249 1 NC_011883.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 815249 7284359 Ddes_0686 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA-directed RNA polymerase subunit alpha YP_002479272.1 814206 D 525146 CDS YP_002479273.1 220903961 7284360 815239..815751 1 NC_011883.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 815751 rplQ 7284360 rplQ Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L17 YP_002479273.1 815239 D 525146 CDS YP_002479274.1 220903962 7284361 complement(816490..817203) 1 NC_011883.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gme:Gmet_0361 short chain dehydrogenase; short chain dehydrogenase 817203 7284361 Ddes_0688 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 short chain dehydrogenase YP_002479274.1 816490 R 525146 CDS YP_002479275.1 220903963 7284362 817798..818784 1 NC_011883.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dvl:Dvul_1736 selenide, water dikinase; selenide, water dikinase 818784 7284362 Ddes_0689 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 selenide, water dikinase YP_002479275.1 817798 D 525146 CDS YP_002479276.1 220903964 7284364 819321..820679 1 NC_011883.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: dvl:Dvul_1735 trigger factor; trigger factor 820679 7284364 Ddes_0690 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 trigger factor YP_002479276.1 819321 D 525146 CDS YP_002479277.1 220903965 7284365 820773..821381 1 NC_011883.1 PFAM: peptidase S14 ClpP; KEGG: lip:LI0794 protease subunit of ATP-dependent Clp proteases; endopeptidase Clp 821381 7284365 Ddes_0691 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 endopeptidase Clp YP_002479277.1 820773 D 525146 CDS YP_002479278.1 220903966 7284366 821384..822676 1 NC_011883.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 822676 clpX 7284366 clpX Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent protease ATP-binding subunit ClpX YP_002479278.1 821384 D 525146 CDS YP_002479279.1 220903967 7284367 822966..823286 1 NC_011883.1 hypothetical protein 823286 7284367 Ddes_0693 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479279.1 822966 D 525146 CDS YP_002479280.1 220903968 7284368 823352..825793 1 NC_011883.1 KEGG: dvl:Dvul_1732 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 825793 7284368 Ddes_0694 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent protease La YP_002479280.1 823352 D 525146 CDS YP_002479281.1 220903969 7284369 826202..826624 1 NC_011883.1 KEGG: dvl:Dvul_0352 hypothetical protein; hypothetical protein 826624 7284369 Ddes_0695 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479281.1 826202 D 525146 CDS YP_002479282.1 220903970 7284370 complement(826866..827645) 1 NC_011883.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 827645 truA 7284370 truA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA pseudouridine synthase A YP_002479282.1 826866 R 525146 CDS YP_002479283.1 220903971 7284371 complement(827645..828964) 1 NC_011883.1 KEGG: dvu:DVU0912 hypothetical protein; hypothetical protein 828964 7284371 Ddes_0697 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479283.1 827645 R 525146 CDS YP_002479284.1 220903972 7284372 complement(828984..829427) 1 NC_011883.1 TIGRFAM: flagellar export protein FliJ; KEGG: dvl:Dvul_2071 flagellar export protein FliJ; flagellar export protein FliJ 829427 7284372 Ddes_0698 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar export protein FliJ YP_002479284.1 828984 R 525146 CDS YP_002479285.1 220903973 7284373 complement(829640..830449) 1 NC_011883.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: dvu:DVU0931 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 830449 7284373 Ddes_0699 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphomethylpyrimidine kinase YP_002479285.1 829640 R 525146 CDS YP_002479286.1 220903974 7284374 830856..832241 1 NC_011883.1 KEGG: dvu:DVU1005 hypothetical protein; hypothetical protein 832241 7284374 Ddes_0700 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479286.1 830856 D 525146 CDS YP_002479287.1 220903975 7284375 832292..832999 1 NC_011883.1 KEGG: dvl:Dvul_1982 cobalbumin biosynthesis enzyme; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase-like protein 832999 7284375 Ddes_0701 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase-like protein YP_002479287.1 832292 D 525146 CDS YP_002479288.1 220903976 7284376 832993..833670 1 NC_011883.1 KEGG: dvl:Dvul_1981 hypothetical protein; hypothetical protein 833670 7284376 Ddes_0702 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479288.1 832993 D 525146 CDS YP_002479289.1 220903977 7284377 833688..834131 1 NC_011883.1 hypothetical protein 834131 7284377 Ddes_0703 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479289.1 833688 D 525146 CDS YP_002479290.1 220903978 7284378 834243..834683 1 NC_011883.1 hypothetical protein 834683 7284378 Ddes_0704 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479290.1 834243 D 525146 CDS YP_002479291.1 220903979 7284379 complement(834724..835059) 1 NC_011883.1 hypothetical protein 835059 7284379 Ddes_0705 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479291.1 834724 R 525146 CDS YP_002479292.1 220903980 7284380 complement(835075..835287) 1 NC_011883.1 hypothetical protein 835287 7284380 Ddes_0706 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479292.1 835075 R 525146 CDS YP_002479293.1 220903981 7284381 complement(835554..836129) 1 NC_011883.1 KEGG: ecv:APECO1_4051 hypothetical protein; hypothetical protein 836129 7284381 Ddes_0707 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479293.1 835554 R 525146 CDS YP_002479294.1 220903982 7284382 complement(836129..836587) 1 NC_011883.1 KEGG: nmu:Nmul_A1437 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 836587 7284382 Ddes_0708 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002479294.1 836129 R 525146 CDS YP_002479295.1 220903983 7284383 complement(836829..838898) 1 NC_011883.1 KEGG: dvu:DVU1714 hypothetical protein; hypothetical protein 838898 7284383 Ddes_0709 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479295.1 836829 R 525146 CDS YP_002479296.1 220903984 7284384 complement(838901..839257) 1 NC_011883.1 KEGG: bvi:Bcep1808_1285 hypothetical protein; hypothetical protein 839257 7284384 Ddes_0710 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479296.1 838901 R 525146 CDS YP_002479297.1 220903985 7284385 complement(839259..840833) 1 NC_011883.1 KEGG: mbb:BCG_0623c PE-PGRS family protein; hypothetical protein 840833 7284385 Ddes_0711 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479297.1 839259 R 525146 CDS YP_002479298.1 220903986 7284386 complement(840945..841535) 1 NC_011883.1 KEGG: dvl:Dvul_0652 hypothetical protein; hypothetical protein 841535 7284386 Ddes_0712 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479298.1 840945 R 525146 CDS YP_002479299.1 220903987 7284387 complement(841772..842218) 1 NC_011883.1 KEGG: CORO1B, LOC476007; coronin, actin binding protein, 1B; hypothetical protein 842218 7284387 Ddes_0713 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479299.1 841772 R 525146 CDS YP_002479300.1 220903988 7284388 complement(842348..843337) 1 NC_011883.1 KEGG: ppg:PputGB1_1751 hypothetical protein; hypothetical protein 843337 7284388 Ddes_0714 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479300.1 842348 R 525146 CDS YP_002479301.1 220903989 7284389 complement(843474..844124) 1 NC_011883.1 KEGG: ppg:PputGB1_1750 hypothetical protein; hypothetical protein 844124 7284389 Ddes_0715 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479301.1 843474 R 525146 CDS YP_002479302.1 220903990 7284390 complement(844114..844458) 1 NC_011883.1 hypothetical protein 844458 7284390 Ddes_0716 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479302.1 844114 R 525146 CDS YP_002479303.1 220903991 7284391 complement(844458..846251) 1 NC_011883.1 KEGG: dvl:Dvul_0646 hypothetical protein; hypothetical protein 846251 7284391 Ddes_0717 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479303.1 844458 R 525146 CDS YP_002479304.1 220903992 7284392 complement(846335..847201) 1 NC_011883.1 KEGG: dvu:DVU1723 hypothetical protein; hypothetical protein 847201 7284392 Ddes_0718 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479304.1 846335 R 525146 CDS YP_002479305.1 220903993 7284393 complement(847185..848570) 1 NC_011883.1 KEGG: mms:mma_2206 hypothetical protein; hypothetical protein 848570 7284393 Ddes_0719 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479305.1 847185 R 525146 CDS YP_002479306.1 220903994 7284394 complement(848744..849121) 1 NC_011883.1 hypothetical protein 849121 7284394 Ddes_0720 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479306.1 848744 R 525146 CDS YP_002479307.1 220903995 7284395 complement(849121..849540) 1 NC_011883.1 KEGG: rce:RC1_1109 hypothetical protein; hypothetical protein 849540 7284395 Ddes_0721 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479307.1 849121 R 525146 CDS YP_002479308.1 220903996 7284396 complement(849713..850024) 1 NC_011883.1 KEGG: dvu:DVU1507 hypothetical protein; hypothetical protein 850024 7284396 Ddes_0722 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479308.1 849713 R 525146 CDS YP_002479309.1 220903997 7284397 complement(850024..850707) 1 NC_011883.1 PFAM: protein of unknown function DUF847; KEGG: dvu:DVU2866 hypothetical protein; hypothetical protein 850707 7284397 Ddes_0723 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479309.1 850024 R 525146 CDS YP_002479310.1 220903998 7284398 complement(850940..851593) 1 NC_011883.1 PFAM: Mor transcription activator domain protein; KEGG: lip:LI0834 hypothetical protein; Mor transcription activator domain-containing protein 851593 7284398 Ddes_0724 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Mor transcription activator domain-containing protein YP_002479310.1 850940 R 525146 CDS YP_002479311.1 220903999 7284399 complement(851580..851843) 1 NC_011883.1 hypothetical protein 851843 7284399 Ddes_0725 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479311.1 851580 R 525146 CDS YP_002479312.1 220904000 7284400 852168..852845 1 NC_011883.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: dvu:DVU1144 Cro/CI family transcriptional regulator; putative phage repressor 852845 7284400 Ddes_0726 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative phage repressor YP_002479312.1 852168 D 525146 CDS YP_002479313.1 220904001 7284401 853890..854318 1 NC_011883.1 PFAM: nucleic acid binding OB-fold tRNA/helicase-type; conserved hypothetical protein; KEGG: pmr:PMI3093 hypothetical protein; hypothetical protein 854318 7284401 Ddes_0727 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479313.1 853890 D 525146 CDS YP_002479314.1 220904002 7284402 854584..854967 1 NC_011883.1 PFAM: nucleic acid binding OB-fold tRNA/helicase-type; conserved hypothetical protein; KEGG: sdy:SDY_3215 hypothetical protein; hypothetical protein 854967 7284402 Ddes_0728 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479314.1 854584 D 525146 CDS YP_002479315.1 220904003 7284403 855020..855424 1 NC_011883.1 PFAM: conserved hypothetical protein; KEGG: spl:Spea_4112 hypothetical protein; hypothetical protein 855424 7284403 Ddes_0729 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479315.1 855020 D 525146 CDS YP_002479316.1 220904004 7284404 855429..856208 1 NC_011883.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: har:HEAR0051 putative two-component system regulatory protein; winged helix family two component transcriptional regulator 856208 7284404 Ddes_0730 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 winged helix family two component transcriptional regulator YP_002479316.1 855429 D 525146 CDS YP_002479317.1 220904005 7284405 856208..857899 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mms:mma_0058 two-component system sensor histidine kinase ColS; histidine kinase 857899 7284405 Ddes_0731 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine kinase YP_002479317.1 856208 D 525146 CDS YP_002479318.1 220904006 7284406 857899..859221 1 NC_011883.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ypy:YPK_1332 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 859221 7284406 Ddes_0732 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RND family efflux transporter MFP subunit YP_002479318.1 857899 D 525146 CDS YP_002479319.1 220904007 7284407 859263..862514 1 NC_011883.1 PFAM: acriflavin resistance protein; KEGG: rpi:Rpic_4183 acriflavin resistance protein; acriflavin resistance protein 862514 7284407 Ddes_0733 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acriflavin resistance protein YP_002479319.1 859263 D 525146 CDS YP_002479320.1 220904008 7284408 862610..865840 1 NC_011883.1 PFAM: acriflavin resistance protein; KEGG: mms:mma_1682 AcrB/AcrD/AcrF family membrane protein; acriflavin resistance protein 865840 7284408 Ddes_0734 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acriflavin resistance protein YP_002479320.1 862610 D 525146 CDS YP_002479321.1 220904009 7284409 complement(866199..866726) 1 NC_011883.1 hypothetical protein 866726 7284409 Ddes_0735 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479321.1 866199 R 525146 CDS YP_002479322.1 220904010 7284410 complement(866749..868362) 1 NC_011883.1 PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: dvl:Dvul_1882 integral membrane protein MviN; virulence factor MVIN family protein 868362 7284410 Ddes_0736 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 virulence factor MVIN family protein YP_002479322.1 866749 R 525146 CDS YP_002479323.1 220904011 7284411 complement(868362..870920) 1 NC_011883.1 KEGG: dvl:Dvul_0774 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; ribonuclease R 870920 7284411 Ddes_0737 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribonuclease R YP_002479323.1 868362 R 525146 CDS YP_002479324.1 220904012 7284412 complement(871020..871724) 1 NC_011883.1 PFAM: protein of unknown function UPF0005; KEGG: dvl:Dvul_0772 hypothetical protein; hypothetical protein 871724 7284412 Ddes_0738 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479324.1 871020 R 525146 CDS YP_002479325.1 220904013 7284413 872058..872657 1 NC_011883.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pen:PSEEN2085 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase); cyclophilin type peptidyl-prolyl cis-trans isomerase 872657 7284413 Ddes_0739 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_002479325.1 872058 D 525146 CDS YP_002479326.1 220904014 7284414 complement(873100..873621) 1 NC_011883.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 873621 ruvC 7284414 ruvC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Holliday junction resolvase YP_002479326.1 873100 R 525146 CDS YP_002479327.1 220904015 7284415 complement(873623..874426) 1 NC_011883.1 PFAM: protein of unknown function DUF140; KEGG: dvu:DVU1246 hypothetical protein; hypothetical protein 874426 7284415 Ddes_0741 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479327.1 873623 R 525146 CDS YP_002479328.1 220904016 7284416 complement(874434..875318) 1 NC_011883.1 PFAM: Sporulation domain protein; KEGG: dvl:Dvul_1815 sporulation domain-containing protein; sporulation domain-containing protein 875318 7284416 Ddes_0742 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sporulation domain-containing protein YP_002479328.1 874434 R 525146 CDS YP_002479329.1 220904017 7284417 complement(875664..877316) 1 NC_011883.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 877316 argS 7284417 argS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 arginyl-tRNA synthetase YP_002479329.1 875664 R 525146 CDS YP_002479330.1 220904018 7284418 complement(877473..878414) 1 NC_011883.1 PFAM: Acyl transferase; KEGG: dvl:Dvul_1813 malonyl CoA-acyl carrier protein transacylase; acyl transferase 878414 7284418 Ddes_0744 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acyl transferase YP_002479330.1 877473 R 525146 CDS YP_002479331.1 220904019 7284419 878850..879548 1 NC_011883.1 PFAM: glucose inhibited division protein; KEGG: dvl:Dvul_1812 glucose inhibited division protein; glucose inhibited division protein 879548 7284419 Ddes_0745 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glucose inhibited division protein YP_002479331.1 878850 D 525146 CDS YP_002479332.1 220904020 7284420 879550..882000 1 NC_011883.1 PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: dvu:DVU1252 hypothetical protein; oligosaccharyl transferase STT3 subunit 882000 7284420 Ddes_0746 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 oligosaccharyl transferase STT3 subunit YP_002479332.1 879550 D 525146 CDS YP_002479333.1 220904021 7284421 complement(882028..882501) 1 NC_011883.1 PFAM: protein of unknown function DUF163; KEGG: dvl:Dvul_1809 hypothetical protein; hypothetical protein 882501 7284421 Ddes_0747 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479333.1 882028 R 525146 CDS YP_002479334.1 220904022 7284422 882500..883171 1 NC_011883.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: dvl:Dvul_1808 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 883171 7284422 Ddes_0748 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Sua5/YciO/YrdC/YwlC family protein YP_002479334.1 882500 D 525146 CDS YP_002479335.1 220904023 7284423 complement(883198..883743) 1 NC_011883.1 PFAM: regulatory protein MarR; SMART: iron dependent repressor; KEGG: cac:CAC0162 MarR family transcriptional regulator; MarR family transcriptional regulator 883743 7284423 Ddes_0749 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MarR family transcriptional regulator YP_002479335.1 883198 R 525146 CDS YP_002479336.1 220904024 7284424 883876..884514 1 NC_011883.1 PFAM: NUDIX hydrolase; KEGG: dvl:Dvul_0997 NUDIX hydrolase; NUDIX hydrolase 884514 7284424 Ddes_0750 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NUDIX hydrolase YP_002479336.1 883876 D 525146 CDS YP_002479337.1 220904025 7284425 884514..886379 1 NC_011883.1 PFAM: Carboxylyase-related protein; KEGG: dvu:DVU2320 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein; carboxylyase-like protein 886379 7284425 Ddes_0751 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carboxylyase-like protein YP_002479337.1 884514 D 525146 CDS YP_002479338.1 220904026 7284426 886397..888079 1 NC_011883.1 KEGG: dvl:Dvul_1524 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; NAD+ synthetase 888079 7284426 Ddes_0752 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD+ synthetase YP_002479338.1 886397 D 525146 CDS YP_002479339.1 220904027 7284427 888416..889399 1 NC_011883.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 889399 glpX 7284427 glpX Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 fructose 1,6-bisphosphatase II YP_002479339.1 888416 D 525146 CDS YP_002479340.1 220904028 7284428 889427..889990 1 NC_011883.1 KEGG: dvl:Dvul_1593 hypothetical protein; hypothetical protein 889990 7284428 Ddes_0754 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479340.1 889427 D 525146 CDS YP_002479341.1 220904029 7284429 890195..890743 1 NC_011883.1 PFAM: 4-vinyl reductase 4VR; KEGG: mhu:Mhun_2966 4-vinyl reductase, 4VR; 4-vinyl reductase 4VR 890743 7284429 Ddes_0755 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4-vinyl reductase 4VR YP_002479341.1 890195 D 525146 CDS YP_002479342.1 220904030 7284430 complement(890849..891364) 1 NC_011883.1 hypothetical protein 891364 7284430 Ddes_0756 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479342.1 890849 R 525146 CDS YP_002479343.1 220904031 7284431 891429..891629 1 NC_011883.1 hypothetical protein 891629 7284431 Ddes_0757 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479343.1 891429 D 525146 CDS YP_002479344.1 220904032 7284432 891622..892644 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: maq:Maqu_2940 sensor diguanylate cyclase; diguanylate cyclase 892644 7284432 Ddes_0758 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase YP_002479344.1 891622 D 525146 CDS YP_002479345.1 220904033 7284433 complement(893055..893618) 1 NC_011883.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dvu:DVU0318 TPR domain-containing protein; hypothetical protein 893618 7284433 Ddes_0759 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479345.1 893055 R 525146 CDS YP_002479346.1 220904034 7284434 complement(894242..894934) 1 NC_011883.1 KEGG: dvu:DVU1028 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 894934 7284434 Ddes_0760 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytidylate kinase YP_002479346.1 894242 R 525146 CDS YP_002479347.1 220904035 7284435 complement(894931..896091) 1 NC_011883.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: dvl:Dvul_1964 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 896091 7284435 Ddes_0761 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidinol-phosphate aminotransferase YP_002479347.1 894931 R 525146 CDS YP_002479348.1 220904036 7284436 complement(896615..897055) 1 NC_011883.1 PFAM: UspA domain protein; KEGG: dvl:Dvul_1963 UspA domain-containing protein; UspA domain-containing protein 897055 7284436 Ddes_0762 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UspA domain-containing protein YP_002479348.1 896615 R 525146 CDS YP_002479349.1 220904037 7284437 897351..897887 1 NC_011883.1 KEGG: dvl:Dvul_1962 hypothetical protein; hypothetical protein 897887 7284437 Ddes_0763 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479349.1 897351 D 525146 CDS YP_002479350.1 220904038 7284438 898100..898246 1 NC_011883.1 hypothetical protein 898246 7284438 Ddes_0764 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479350.1 898100 D 525146 CDS YP_002479351.1 220904039 7284439 complement(898345..898875) 1 NC_011883.1 KEGG: pca:Pcar_1711 hypothetical protein; hypothetical protein 898875 7284439 Ddes_0765 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479351.1 898345 R 525146 CDS YP_002479352.1 220904040 7284440 complement(899118..899315) 1 NC_011883.1 KEGG: nAcRalpha-7E; nicotinic Acetylcholine Receptor alpha 7E; K05312 cholinergic receptor, nicotinic, invertebrate; hypothetical protein 899315 7284440 Ddes_0766 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479352.1 899118 R 525146 CDS YP_002479353.1 220904041 7284441 complement(899375..899599) 1 NC_011883.1 KEGG: fno:Fnod_0248 hypothetical protein; hypothetical protein 899599 7284441 Ddes_0767 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479353.1 899375 R 525146 CDS YP_002479354.1 220904042 7284442 899903..901924 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: dol:Dole_0426 signal transduction histidine kinase, nitrogen specific, NtrB; PAS/PAC sensor signal transduction histidine kinase 901924 7284442 Ddes_0768 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PAS/PAC sensor signal transduction histidine kinase YP_002479354.1 899903 D 525146 CDS YP_002479355.1 220904043 7284443 901973..903334 1 NC_011883.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dol:Dole_0427 two component, sigma54 specific, Fis family transcriptional regulator; Fis family two component sigma-54 specific transcriptional regulator 903334 7284443 Ddes_0769 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family two component sigma-54 specific transcriptional regulator YP_002479355.1 901973 D 525146 CDS YP_002479356.1 220904044 7284444 903376..903741 1 NC_011883.1 PFAM: diacylglycerol kinase; KEGG: azo:azo0859 probable diacylglycerol kinase; diacylglycerol kinase 903741 7284444 Ddes_0770 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diacylglycerol kinase YP_002479356.1 903376 D 525146 CDS YP_002479357.1 220904045 7284445 complement(903825..904814) 1 NC_011883.1 KEGG: ctc:CTC01028 alkaline phosphatase; hypothetical protein 904814 7284445 Ddes_0771 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479357.1 903825 R 525146 CDS YP_002479358.1 220904046 7284446 complement(904814..905224) 1 NC_011883.1 hypothetical protein 905224 7284446 Ddes_0772 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479358.1 904814 R 525146 CDS YP_002479359.1 220904047 7284447 complement(905273..906037) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gme:Gmet_0369 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 906037 7284447 Ddes_0773 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002479359.1 905273 R 525146 CDS YP_002479360.1 220904048 7284448 complement(906047..907744) 1 NC_011883.1 KEGG: gsu:GSU0743 NAD-dependent dehydrogenase subunit; NAD-dependent dehydrogenase subunit 907744 7284448 Ddes_0774 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent dehydrogenase subunit YP_002479360.1 906047 R 525146 CDS YP_002479361.1 220904049 7284449 complement(907902..909395) 1 NC_011883.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gme:Gmet_0372 NADH/ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 909395 7284449 Ddes_0775 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (quinone) YP_002479361.1 907902 R 525146 CDS YP_002479362.1 220904050 7284450 complement(909401..910024) 1 NC_011883.1 KEGG: gbm:Gbem_3190 NAD-dependent dehydrogenase subunit; NAD-dependent dehydrogenase subunit 910024 7284450 Ddes_0776 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent dehydrogenase subunit YP_002479362.1 909401 R 525146 CDS YP_002479363.1 220904051 7284451 complement(910029..910970) 1 NC_011883.1 KEGG: ade:Adeh_3656 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 910970 7284451 Ddes_0777 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 respiratory-chain NADH dehydrogenase subunit 1 YP_002479363.1 910029 R 525146 CDS YP_002479364.1 220904052 7284452 complement(910967..913015) 1 NC_011883.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: afw:Anae109_3780 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 913015 7284452 Ddes_0778 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (quinone) YP_002479364.1 910967 R 525146 CDS YP_002479365.1 220904053 7284453 complement(913042..913998) 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: dvl:Dvul_0782 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 913998 7284453 Ddes_0779 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent epimerase/dehydratase YP_002479365.1 913042 R 525146 CDS YP_002479366.1 220904054 7284454 914146..914967 1 NC_011883.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: dvl:Dvul_0185 TatD family hydrolase; TatD family hydrolase 914967 7284454 Ddes_0780 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TatD family hydrolase YP_002479366.1 914146 D 525146 CDS YP_002479367.1 220904055 7284455 915507..916343 1 NC_011883.1 TIGRFAM: phosphate binding protein; KEGG: lip:LI1028 phosphate-binding protein; phosphate binding protein 916343 7284455 Ddes_0781 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate binding protein YP_002479367.1 915507 D 525146 CDS YP_002479368.1 220904056 7284456 916330..917289 1 NC_011883.1 KEGG: lip:LI1029 phosphate transporter permease PstC; phosphate transporter permease PstC 917289 7284456 Ddes_0782 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate transporter permease PstC YP_002479368.1 916330 D 525146 CDS YP_002479369.1 220904057 7284457 917286..918173 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0591 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 918173 7284457 Ddes_0783 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002479369.1 917286 D 525146 CDS YP_002479370.1 220904058 7284458 918170..918973 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lip:LI1031 phosphate ABC transporter ATP-binding protein; ABC transporter-like protein 918973 7284458 Ddes_0784 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479370.1 918170 D 525146 CDS YP_002479371.1 220904059 7284459 919155..920138 1 NC_011883.1 TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoyltransferase and lipoate-protein ligase; KEGG: bcy:Bcer98_0839 lipoyltransferase and lipoate-protein ligase; lipoyltransferase and lipoate-protein ligase 920138 7284459 Ddes_0785 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lipoyltransferase and lipoate-protein ligase YP_002479371.1 919155 D 525146 CDS YP_002479372.1 220904060 7284460 920381..921463 1 NC_011883.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: dvu:DVU1684 glycine cleavage system T protein; glycine cleavage system T protein 921463 7284460 Ddes_0786 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine cleavage system T protein YP_002479372.1 920381 D 525146 CDS YP_002479373.1 220904061 7284461 921584..921970 1 NC_011883.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: dvl:Dvul_1650 glycine cleavage system H protein; glycine cleavage system H protein 921970 7284461 Ddes_0787 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine cleavage system H protein YP_002479373.1 921584 D 525146 CDS YP_002479374.1 220904062 7284462 922292..923623 1 NC_011883.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 923623 7284462 Ddes_0788 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine dehydrogenase subunit 1 YP_002479374.1 922292 D 525146 CDS YP_002479375.1 220904063 7284463 923620..925068 1 NC_011883.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 925068 7284463 Ddes_0789 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine dehydrogenase subunit 2 YP_002479375.1 923620 D 525146 CDS YP_002479376.1 220904064 7284465 complement(925601..926332) 1 NC_011883.1 PFAM: protein of unknown function DUF208; KEGG: dvl:Dvul_0320 hypothetical protein; hypothetical protein 926332 7284465 Ddes_0790 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479376.1 925601 R 525146 CDS YP_002479377.1 220904065 7284466 complement(926305..929535) 1 NC_011883.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: dvu:DVU3055 ribonuclease; ribonuclease, Rne/Rng family 929535 7284466 Ddes_0791 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribonuclease, Rne/Rng family YP_002479377.1 926305 R 525146 CDS YP_002479378.1 220904066 7284467 complement(929879..930568) 1 NC_011883.1 PFAM: metallophosphoesterase; KEGG: dvu:DVU0367 Ser/Thr protein phosphatase family protein; metallophosphoesterase 930568 7284467 Ddes_0792 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metallophosphoesterase YP_002479378.1 929879 R 525146 CDS YP_002479379.1 220904067 7284468 930641..931435 1 NC_011883.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: dvu:DVU0366 5-formyltetrahydrofolate cyclo-ligase family protein; 5-formyltetrahydrofolate cyclo-ligase 931435 7284468 Ddes_0793 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 5-formyltetrahydrofolate cyclo-ligase YP_002479379.1 930641 D 525146 CDS YP_002479380.1 220904068 7284469 931426..932184 1 NC_011883.1 PFAM: protein of unknown function DUF152; KEGG: dvl:Dvul_2619 hypothetical protein; hypothetical protein 932184 7284469 Ddes_0794 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479380.1 931426 D 525146 CDS YP_002479381.1 220904069 7284470 complement(932162..932791) 1 NC_011883.1 hypothetical protein 932791 7284470 Ddes_0795 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479381.1 932162 R 525146 CDS YP_002479382.1 220904070 7284471 932980..933870 1 NC_011883.1 PFAM: transport system permease protein; KEGG: dvl:Dvul_2311 transport system permease protein; transport system permease 933870 7284471 Ddes_0796 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transport system permease YP_002479382.1 932980 D 525146 CDS YP_002479383.1 220904071 7284472 933867..934823 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU0648 iron compound ABC transporter, ATP-binding protein; ABC transporter-like protein 934823 7284472 Ddes_0797 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479383.1 933867 D 525146 CDS YP_002479384.1 220904072 7284473 934843..935763 1 NC_011883.1 PFAM: periplasmic binding protein; KEGG: dvl:Dvul_2313 periplasmic binding protein; periplasmic binding protein 935763 7284473 Ddes_0798 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 periplasmic binding protein YP_002479384.1 934843 D 525146 CDS YP_002479385.1 220904073 7284474 935807..936517 1 NC_011883.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvl:Dvul_2314 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 936517 7284474 Ddes_0799 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 precorrin-2 C(20)-methyltransferase YP_002479385.1 935807 D 525146 CDS YP_002479386.1 220904074 7284475 complement(936653..937657) 1 NC_011883.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dvl:Dvul_2656 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 937657 7284475 Ddes_0800 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase expression/formation protein HypE YP_002479386.1 936653 R 525146 CDS YP_002479387.1 220904075 7284476 complement(937657..938748) 1 NC_011883.1 PFAM: hydrogenase formation HypD protein; KEGG: dvl:Dvul_2657 hydrogenase formation HypD protein; hydrogenase formation HypD protein 938748 7284476 Ddes_0801 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase formation HypD protein YP_002479387.1 937657 R 525146 CDS YP_002479388.1 220904076 7284477 complement(939066..940121) 1 NC_011883.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 940121 argC 7284477 argC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyl-gamma-glutamyl-phosphate reductase YP_002479388.1 939066 R 525146 CDS YP_002479389.1 220904077 7284478 complement(940255..940593) 1 NC_011883.1 PFAM: Domain of unknown function DUF1844; KEGG: dvl:Dvul_2448 hypothetical protein; hypothetical protein 940593 7284478 Ddes_0803 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479389.1 940255 R 525146 CDS YP_002479390.1 220904078 7284479 complement(940839..942023) 1 NC_011883.1 PFAM: aminotransferase class V; KEGG: dvu:DVU0494 aminotransferase, class V; class V aminotransferase 942023 7284479 Ddes_0804 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 class V aminotransferase YP_002479390.1 940839 R 525146 CDS YP_002479391.1 220904079 7284480 complement(942443..943978) 1 NC_011883.1 hypothetical protein 943978 7284480 Ddes_0805 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479391.1 942443 R 525146 CDS YP_002479392.1 220904080 7284481 complement(944070..945695) 1 NC_011883.1 KEGG: dvl:Dvul_1351 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; L-aspartate oxidase 945695 7284481 Ddes_0806 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 L-aspartate oxidase YP_002479392.1 944070 R 525146 CDS YP_002479393.1 220904081 7284482 complement(945706..946752) 1 NC_011883.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 946752 7284482 Ddes_0807 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 quinolinate synthetase YP_002479393.1 945706 R 525146 CDS YP_002479394.1 220904082 7284483 complement(946793..947665) 1 NC_011883.1 KEGG: dvl:Dvul_1353 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 947665 7284483 Ddes_0808 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nicotinate-nucleotide pyrophosphorylase YP_002479394.1 946793 R 525146 CDS YP_002479395.1 220904083 7284484 947920..949548 1 NC_011883.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: dvl:Dvul_1354 magnesium transporter; magnesium transporter 949548 7284484 Ddes_0809 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 magnesium transporter YP_002479395.1 947920 D 525146 CDS YP_002479396.1 220904084 7284485 949635..950306 1 NC_011883.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sus:Acid_7878 two component LuxR family transcriptional regulator; LuxR family two component transcriptional regulator 950306 7284485 Ddes_0810 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 LuxR family two component transcriptional regulator YP_002479396.1 949635 D 525146 CDS YP_002479397.1 220904085 7284486 950720..951859 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_0412 hypothetical protein; hypothetical protein 951859 7284486 Ddes_0811 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479397.1 950720 D 525146 CDS YP_002479398.1 220904086 7284487 951896..952327 1 NC_011883.1 KEGG: dvl:Dvul_0411 hypothetical protein; hypothetical protein 952327 7284487 Ddes_0812 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479398.1 951896 D 525146 CDS YP_002479399.1 220904087 7284488 952510..954273 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0408 integral membrane sensor signal transduction histidine kinase; histidine kinase 954273 7284488 Ddes_0813 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine kinase YP_002479399.1 952510 D 525146 CDS YP_002479400.1 220904088 7284489 954276..954674 1 NC_011883.1 PFAM: response regulator receiver; KEGG: dvl:Dvul_0407 response regulator receiver protein; response regulator receiver protein 954674 7284489 Ddes_0814 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002479400.1 954276 D 525146 CDS YP_002479401.1 220904089 7284490 954671..955348 1 NC_011883.1 KEGG: dvl:Dvul_0406 hypothetical protein; hypothetical protein 955348 7284490 Ddes_0815 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479401.1 954671 D 525146 CDS YP_002479402.1 220904090 7284491 955388..955861 1 NC_011883.1 PFAM: response regulator receiver; KEGG: dvl:Dvul_0404 response regulator receiver protein; response regulator receiver protein 955861 7284491 Ddes_0816 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002479402.1 955388 D 525146 CDS YP_002479403.1 220904091 7284492 955901..957256 1 NC_011883.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvu:DVU2967 sensor histidine kinase/response regulator; response regulator receiver sensor signal transduction histidine kinase 957256 7284492 Ddes_0817 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver sensor signal transduction histidine kinase YP_002479403.1 955901 D 525146 CDS YP_002479404.1 220904092 7284493 complement(957551..958096) 1 NC_011883.1 KEGG: cvi:CV_4287 hypothetical protein; hypothetical protein 958096 7284493 Ddes_0818 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479404.1 957551 R 525146 CDS YP_002479405.1 220904093 7284494 complement(958455..959144) 1 NC_011883.1 PFAM: CI repressor; peptidase S24 and S26 domain protein; KEGG: dvu:DVU2686 S24 family peptidase; putative phage repressor 959144 7284494 Ddes_0819 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative phage repressor YP_002479405.1 958455 R 525146 CDS YP_002479406.1 220904094 7284495 complement(959406..960422) 1 NC_011883.1 KEGG: spl:Spea_1850 hypothetical protein; hypothetical protein 960422 7284495 Ddes_0820 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479406.1 959406 R 525146 CDS YP_002479407.1 220904095 7284496 960898..962988 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvu:DVU2309 methyl-accepting chemotaxis protein, putative; methyl-accepting chemotaxis sensory transducer 962988 7284496 Ddes_0821 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002479407.1 960898 D 525146 CDS YP_002479408.1 220904096 7284497 complement(963171..964034) 1 NC_011883.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dvl:Dvul_0958 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 964034 7284497 Ddes_0822 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine betaine ABC transporter substrate-binding protein YP_002479408.1 963171 R 525146 CDS YP_002479409.1 220904097 7284498 complement(964357..965199) 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0957 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 965199 7284498 Ddes_0823 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002479409.1 964357 R 525146 CDS YP_002479410.1 220904098 7284499 complement(965189..966397) 1 NC_011883.1 KEGG: dvl:Dvul_0956 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 966397 7284499 Ddes_0824 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine betaine/L-proline ABC transporter ATPase YP_002479410.1 965189 R 525146 CDS YP_002479411.1 220904099 7284500 complement(967476..968438) 1 NC_011883.1 KEGG: msm:MSMEG_1846 polysulphide reductase, NrfD; hypothetical protein 968438 7284500 Ddes_0825 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479411.1 967476 R 525146 CDS YP_002479412.1 220904100 7284501 complement(968438..969310) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mmi:MMAR_5196 Fe-S-cluster-containing hydrogenase, HybA; 4Fe-4S ferredoxin 969310 7284501 Ddes_0826 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479412.1 968438 R 525146 CDS YP_002479413.1 220904101 7284502 complement(969300..972452) 1 NC_011883.1 KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; formate dehydrogenase subunit alpha 972452 7284502 Ddes_0827 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formate dehydrogenase subunit alpha YP_002479413.1 969300 R 525146 CDS YP_002479414.1 220904102 7284503 complement(972738..973994) 1 NC_011883.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: cpe:CPE1793 molybdenum cofactor biosynthesis protein MoeA; molybdenum cofactor synthesis domain-containing protein 973994 7284503 Ddes_0828 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdenum cofactor synthesis domain-containing protein YP_002479414.1 972738 R 525146 CDS YP_002479415.1 220904103 7284504 complement(973996..974793) 1 NC_011883.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pca:Pcar_1840 formate dehydrogenase accessory protein; formate dehydrogenase family accessory protein FdhD 974793 7284504 Ddes_0829 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formate dehydrogenase family accessory protein FdhD YP_002479415.1 973996 R 525146 CDS YP_002479416.1 220904104 7284505 975096..975557 1 NC_011883.1 hypothetical protein 975557 7284505 Ddes_0830 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479416.1 975096 D 525146 CDS YP_002479417.1 220904105 7284506 975572..976618 1 NC_011883.1 KEGG: afw:Anae109_2612 cellulose biosynthesis (CelD)-like protein; hypothetical protein 976618 7284506 Ddes_0831 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479417.1 975572 D 525146 CDS YP_002479418.1 220904106 7284507 976950..977627 1 NC_011883.1 KEGG: seh:SeHA_C4728 heat resistant agglutinin 1; heat resistant agglutinin 1 977627 7284507 Ddes_0832 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heat resistant agglutinin 1 YP_002479418.1 976950 D 525146 CDS YP_002479419.1 220904107 7284508 978500..979948 1 NC_011883.1 PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: dvl:Dvul_0991 chromosomal replication initiator protein DnaA; Chromosomal replication initiator DnaA 979948 7284508 Ddes_0833 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Chromosomal replication initiator DnaA YP_002479419.1 978500 D 525146 CDS YP_002479420.1 220904108 7284509 complement(980215..980748) 1 NC_011883.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: lip:LI0442 processing of HyaA and HyaB proteins; hydrogenase maturation protease 980748 7284509 Ddes_0834 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase maturation protease YP_002479420.1 980215 R 525146 CDS YP_002479421.1 220904109 7284510 complement(980990..981694) 1 NC_011883.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: sbc:SbBS512_E2341 Ni/Fe-hydrogenase 1 B-type cytochrome subunit HyaC; Ni/Fe-hydrogenase, b-type cytochrome subunit 981694 7284510 Ddes_0835 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_002479421.1 980990 R 525146 CDS YP_002479422.1 220904110 7284511 complement(981748..983562) 1 NC_011883.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: lip:LI0440 hydrogenase-1 large subunit; nickel-dependent hydrogenase large subunit 983562 7284511 Ddes_0836 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nickel-dependent hydrogenase large subunit YP_002479422.1 981748 R 525146 CDS YP_002479423.1 220904111 7284512 complement(983574..984677) 1 NC_011883.1 KEGG: lip:LI0439 hydrogenase-1 small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA 984677 7284512 Ddes_0837 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase (NiFe) small subunit HydA YP_002479423.1 983574 R 525146 CDS YP_002479424.1 220904112 7284513 complement(984903..985097) 1 NC_011883.1 hypothetical protein 985097 7284513 Ddes_0838 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479424.1 984903 R 525146 CDS YP_002479425.1 220904113 7284514 complement(985228..986829) 1 NC_011883.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pis:Pisl_0176 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; hypothetical protein 986829 7284514 Ddes_0839 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479425.1 985228 R 525146 CDS YP_002479426.1 220904114 7284515 complement(986841..987779) 1 NC_011883.1 PFAM: Nitrate reductase gamma subunit; KEGG: afu:AF0545 hypothetical protein; Nitrate reductase gamma subunit 987779 7284515 Ddes_0840 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Nitrate reductase gamma subunit YP_002479426.1 986841 R 525146 CDS YP_002479427.1 220904115 7284517 complement(988727..989143) 1 NC_011883.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dvl:Dvul_1205 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 989143 7284517 Ddes_0842 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 BadM/Rrf2 family transcriptional regulator YP_002479427.1 988727 R 525146 CDS YP_002479428.1 220904116 7284518 989490..990035 1 NC_011883.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dvl:Dvul_1204 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 990035 7284518 Ddes_0843 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 BadM/Rrf2 family transcriptional regulator YP_002479428.1 989490 D 525146 CDS YP_002479429.1 220904117 7284519 990079..990312 1 NC_011883.1 KEGG: dvl:Dvul_1201 response regulator receiver protein; response regulator receiver protein 990312 7284519 Ddes_0844 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002479429.1 990079 D 525146 CDS YP_002479430.1 220904118 7284520 complement(990514..991902) 1 NC_011883.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_2410 hypothetical protein; hypothetical protein 991902 7284520 Ddes_0845 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479430.1 990514 R 525146 CDS YP_002479431.1 220904119 7284521 complement(991947..992627) 1 NC_011883.1 KEGG: dvl:Dvul_2409 hmc operon protein 5; hmc operon protein 5 992627 7284521 Ddes_0846 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hmc operon protein 5 YP_002479431.1 991947 R 525146 CDS YP_002479432.1 220904120 7284522 complement(992678..993082) 1 NC_011883.1 KEGG: dvl:Dvul_2405 cytochrome c, class III; hypothetical protein 993082 7284522 Ddes_0847 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479432.1 992678 R 525146 CDS YP_002479433.1 220904121 7284523 complement(993206..993490) 1 NC_011883.1 hypothetical protein 993490 7284523 Ddes_0848 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479433.1 993206 R 525146 CDS YP_002479434.1 220904122 7284524 994486..994998 1 NC_011883.1 PFAM: SEC-C motif domain protein; KEGG: dvl:Dvul_2736 SecC motif-containing protein; SEC-C motif domain-containing protein 994998 7284524 Ddes_0849 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SEC-C motif domain-containing protein YP_002479434.1 994486 D 525146 CDS YP_002479435.1 220904123 7284525 994995..995381 1 NC_011883.1 KEGG: dvl:Dvul_2735 hypothetical protein; hypothetical protein 995381 7284525 Ddes_0850 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479435.1 994995 D 525146 CDS YP_002479436.1 220904124 7284526 995481..996821 1 NC_011883.1 PFAM: phosphoglucose isomerase (PGI); KEGG: dvu:DVU3222 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 996821 7284526 Ddes_0851 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glucose-6-phosphate isomerase YP_002479436.1 995481 D 525146 CDS YP_002479437.1 220904125 7284527 996825..998411 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0167 integral membrane sensor signal transduction histidine kinase; histidine kinase 998411 7284527 Ddes_0852 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine kinase YP_002479437.1 996825 D 525146 CDS YP_002479438.1 220904126 7284528 998416..999795 1 NC_011883.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvu:DVU3220 sigma-54 dependent transcriptional regulator/response regulator; Fis family two component sigma-54 specific transcriptional regulator 999795 7284528 Ddes_0853 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family two component sigma-54 specific transcriptional regulator YP_002479438.1 998416 D 525146 CDS YP_002479439.1 220904127 7284529 1001155..1001940 1 NC_011883.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: cko:CKO_04630 transcriptional regulator NanR; GntR family transcriptional regulator 1001940 7284529 Ddes_0854 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GntR family transcriptional regulator YP_002479439.1 1001155 D 525146 CDS YP_002479440.1 220904128 7284531 complement(1002509..1003351) 1 NC_011883.1 PFAM: amidohydrolase 2; KEGG: dvu:DVU0885 amidohydrolase family protein; amidohydrolase 2 1003351 7284531 Ddes_0855 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amidohydrolase 2 YP_002479440.1 1002509 R 525146 CDS YP_002479441.1 220904129 7284532 complement(1003354..1004325) 1 NC_011883.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dvl:Dvul_1662 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1004325 7284532 Ddes_0856 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_002479441.1 1003354 R 525146 CDS YP_002479442.1 220904130 7284533 complement(1004545..1005012) 1 NC_011883.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: lip:LI0691 outer membrane protein and related peptidoglycan-associated (LipO)proteins; peptidoglycan-associated lipoprotein 1005012 7284533 Ddes_0857 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidoglycan-associated lipoprotein YP_002479442.1 1004545 R 525146 CDS YP_002479443.1 220904131 7284534 complement(1005237..1006556) 1 NC_011883.1 PFAM: WD40 domain protein beta Propeller; KEGG: dvl:Dvul_0278 WD40 domain-containing protein; WD40 domain-containing protein 1006556 7284534 Ddes_0858 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 WD40 domain-containing protein YP_002479443.1 1005237 R 525146 CDS YP_002479444.1 220904132 7284535 complement(1006587..1007837) 1 NC_011883.1 KEGG: dvl:Dvul_0279 TonB family protein; hypothetical protein 1007837 7284535 Ddes_0859 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479444.1 1006587 R 525146 CDS YP_002479445.1 220904133 7284536 complement(1007880..1008851) 1 NC_011883.1 TIGRFAM: protein TolA; KEGG: dvl:Dvul_0280 TonB domain-containing protein; protein TolA 1008851 7284536 Ddes_0860 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 protein TolA YP_002479445.1 1007880 R 525146 CDS YP_002479446.1 220904134 7284537 complement(1008858..1009316) 1 NC_011883.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvl:Dvul_0281 biopolymer transport protein ExbD/TolR; protein TolR 1009316 7284537 Ddes_0861 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 protein TolR YP_002479446.1 1008858 R 525146 CDS YP_002479447.1 220904135 7284538 complement(1009318..1010013) 1 NC_011883.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvl:Dvul_0282 MotA/TolQ/ExbB proton channel; protein TolQ 1010013 7284538 Ddes_0862 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 protein TolQ YP_002479447.1 1009318 R 525146 CDS YP_002479448.1 220904136 7284539 1010939..1012369 1 NC_011883.1 PFAM: outer membrane efflux protein; KEGG: dvl:Dvul_0283 outer membrane efflux protein; outer membrane efflux protein 1012369 7284539 Ddes_0863 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane efflux protein YP_002479448.1 1010939 D 525146 CDS YP_002479449.1 220904137 7284540 1012403..1014061 1 NC_011883.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dvu:DVU0876 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1014061 7284540 Ddes_0864 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-lactamase domain-containing protein YP_002479449.1 1012403 D 525146 CDS YP_002479450.1 220904138 7284541 1014336..1014596 1 NC_011883.1 hypothetical protein 1014596 7284541 Ddes_0865 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479450.1 1014336 D 525146 CDS YP_002479451.1 220904139 7284542 1015919..1017082 1 NC_011883.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: lip:LI0675 membrane protease subunits, stomatin/prohibitin homologs; HflK protein 1017082 7284542 Ddes_0866 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HflK protein YP_002479451.1 1015919 D 525146 CDS YP_002479452.1 220904140 7284543 1017082..1017930 1 NC_011883.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: lip:LI0676 membrane protease subunits, stomatin/prohibitin homologs; HflC protein 1017930 7284543 Ddes_0867 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HflC protein YP_002479452.1 1017082 D 525146 CDS YP_002479453.1 220904141 7284544 1017930..1018658 1 NC_011883.1 PFAM: CI repressor; peptidase S24 and S26 domain protein; KEGG: dvl:Dvul_2281 putative phage repressor; putative phage repressor 1018658 7284544 Ddes_0868 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative phage repressor YP_002479453.1 1017930 D 525146 CDS YP_002479454.1 220904142 7284545 1018661..1019911 1 NC_011883.1 KEGG: dvu:DVU0677 transglycosylase domain-containing protein; Membrane-bound lytic murein transglycosylase B-like protein 1019911 7284545 Ddes_0869 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Membrane-bound lytic murein transglycosylase B-like protein YP_002479454.1 1018661 D 525146 CDS YP_002479455.1 220904143 7284546 complement(1020244..1020450) 1 NC_011883.1 hypothetical protein 1020450 7284546 Ddes_0870 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479455.1 1020244 R 525146 CDS YP_002479456.1 220904144 7284547 1020505..1021161 1 NC_011883.1 KEGG: dvl:Dvul_2650 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1021161 7284547 Ddes_0871 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002479456.1 1020505 D 525146 CDS YP_002479457.1 220904145 7284548 1021124..1022044 1 NC_011883.1 KEGG: dvl:Dvul_2649 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: phosphoribosylglycinamide synthetase; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1022044 7284548 Ddes_0872 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 D-alanine--D-alanine ligase YP_002479457.1 1021124 D 525146 CDS YP_002479458.1 220904146 7284549 1022359..1023276 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: dsy:DSY1618 hypothetical protein; hypothetical protein 1023276 7284549 Ddes_0873 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479458.1 1022359 D 525146 CDS YP_002479459.1 220904147 7284550 complement(1023404..1024381) 1 NC_011883.1 PFAM: UbiA prenyltransferase; KEGG: sat:SYN_02622 1,4-dihydroxy-2-naphthoate polyprenyltransferase; UbiA prenyltransferase 1024381 7284550 Ddes_0874 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UbiA prenyltransferase YP_002479459.1 1023404 R 525146 CDS YP_002479460.1 220904148 7284551 complement(1024384..1024881) 1 NC_011883.1 KEGG: dvl:Dvul_2887 polysaccharide biosynthesis domain-containing protein; polysaccharide biosynthesis domain-containing protein 1024881 7284551 Ddes_0875 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polysaccharide biosynthesis domain-containing protein YP_002479460.1 1024384 R 525146 CDS YP_002479461.1 220904149 7284552 complement(1024883..1025998) 1 NC_011883.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: dvu:DVU0073 CDP-glucose-4,6-dehydratase, putative; CDP-glucose 4,6-dehydratase 1025998 7284552 Ddes_0876 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CDP-glucose 4,6-dehydratase YP_002479461.1 1024883 R 525146 CDS YP_002479462.1 220904150 7284553 complement(1026130..1026894) 1 NC_011883.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: dvl:Dvul_2889 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 1026894 7284553 Ddes_0877 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glucose-1-phosphate cytidylyltransferase YP_002479462.1 1026130 R 525146 CDS YP_002479463.1 220904151 7284554 1027082..1027768 1 NC_011883.1 KEGG: bbr:BB0586 hypothetical protein; hypothetical protein 1027768 7284554 Ddes_0878 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479463.1 1027082 D 525146 CDS YP_002479464.1 220904152 7284555 complement(1027950..1029635) 1 NC_011883.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: dvl:Dvul_0152 small GTP-binding protein; GTP-binding proten HflX 1029635 7284555 Ddes_0879 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTP-binding proten HflX YP_002479464.1 1027950 R 525146 CDS YP_002479465.1 220904153 7284556 complement(1029722..1030312) 1 NC_011883.1 PFAM: MGS domain protein; KEGG: dvu:DVU3235 IMP cyclohydrolase, putative; IMP cyclohydrolase 1030312 7284556 Ddes_0880 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 IMP cyclohydrolase YP_002479465.1 1029722 R 525146 CDS YP_002479466.1 220904154 7284557 1030491..1031297 1 NC_011883.1 KEGG: dvl:Dvul_0130 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 1031297 7284557 Ddes_0881 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 exodeoxyribonuclease III Xth YP_002479466.1 1030491 D 525146 CDS YP_002479467.1 220904155 7284558 1031475..1032896 1 NC_011883.1 PFAM: FAD linked oxidase domain protein; KEGG: dvu:DVU0827 glycolate oxidase, subunit GlcD, putative; FAD linked oxidase domain-containing protein 1032896 7284558 Ddes_0882 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD linked oxidase domain-containing protein YP_002479467.1 1031475 D 525146 CDS YP_002479468.1 220904156 7284559 1032899..1034062 1 NC_011883.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_2155 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; hypothetical protein 1034062 7284559 Ddes_0883 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479468.1 1032899 D 525146 CDS YP_002479469.1 220904157 7284560 complement(1034314..1034604) 1 NC_011883.1 hypothetical protein 1034604 7284560 Ddes_0884 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479469.1 1034314 R 525146 CDS YP_002479470.1 220904158 7284561 1034618..1034761 1 NC_011883.1 hypothetical protein 1034761 7284561 Ddes_0885 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479470.1 1034618 D 525146 CDS YP_002479471.1 220904159 7284562 complement(1034816..1035439) 1 NC_011883.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0116 TPR repeat-containing protein; hypothetical protein 1035439 7284562 Ddes_0886 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479471.1 1034816 R 525146 CDS YP_002479472.1 220904160 7284563 complement(1035436..1035828) 1 NC_011883.1 KEGG: dvl:Dvul_0115 hypothetical protein; hypothetical protein 1035828 7284563 Ddes_0887 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479472.1 1035436 R 525146 CDS YP_002479473.1 220904161 7284564 complement(1035974..1036645) 1 NC_011883.1 PFAM: protein of unknown function UPF0153; KEGG: dvl:Dvul_0114 hypothetical protein; hypothetical protein 1036645 7284564 Ddes_0888 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479473.1 1035974 R 525146 CDS YP_002479474.1 220904162 7284565 complement(1036947..1037135) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0113 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1037135 7284565 Ddes_0889 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479474.1 1036947 R 525146 CDS YP_002479475.1 220904163 7284566 complement(1037354..1038796) 1 NC_011883.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: dvl:Dvul_0112 peptidase S1 and S6, chymotrypsin/Hap; 2-alkenal reductase 1038796 7284566 Ddes_0890 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-alkenal reductase YP_002479475.1 1037354 R 525146 CDS YP_002479476.1 220904164 7284567 1038932..1040050 1 NC_011883.1 KEGG: dvl:Dvul_0111 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1040050 7284567 Ddes_0891 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_002479476.1 1038932 D 525146 CDS YP_002479477.1 220904165 7284568 1040143..1041129 1 NC_011883.1 KEGG: dvl:Dvul_0110 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1041129 7284568 Ddes_0892 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 oligopeptide/dipeptide ABC transporter ATPase YP_002479477.1 1040143 D 525146 CDS YP_002479478.1 220904166 7284569 complement(1041502..1042332) 1 NC_011883.1 KEGG: dvu:DVU2332 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 1042332 7284569 Ddes_0893 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyrroline-5-carboxylate reductase YP_002479478.1 1041502 R 525146 CDS YP_002479479.1 220904167 7284570 complement(1042336..1042755) 1 NC_011883.1 PFAM: nucleoside diphosphate kinase; KEGG: dvl:Dvul_0925 nucleoside-diphosphate kinase; nucleoside-diphosphate kinase 1042755 7284570 Ddes_0894 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nucleoside-diphosphate kinase YP_002479479.1 1042336 R 525146 CDS YP_002479480.1 220904168 7284571 complement(1042956..1044428) 1 NC_011883.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: dvl:Dvul_0924 protein of unknown function DUF610, YibQ; hypothetical protein 1044428 7284571 Ddes_0895 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479480.1 1042956 R 525146 CDS YP_002479481.1 220904169 7284572 complement(1044455..1045786) 1 NC_011883.1 KEGG: dvu:DVU2336 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 1045786 7284572 Ddes_0896 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carboxyl-terminal protease YP_002479481.1 1044455 R 525146 CDS YP_002479482.1 220904170 7284573 complement(1046325..1046828) 1 NC_011883.1 PFAM: Rubrerythrin; KEGG: dvl:Dvul_0940 rubrerythrin; rubrerythrin 1046828 7284573 Ddes_0897 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rubrerythrin YP_002479482.1 1046325 R 525146 CDS YP_002479483.1 220904171 7284574 1047228..1047812 1 NC_011883.1 PFAM: protein of unknown function DUF985; KEGG: gsu:GSU0173 hypothetical protein; hypothetical protein 1047812 7284574 Ddes_0898 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479483.1 1047228 D 525146 CDS YP_002479484.1 220904172 7284575 1047809..1048444 1 NC_011883.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: dvl:Dvul_0944 hypothetical protein; hypothetical protein 1048444 7284575 Ddes_0899 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479484.1 1047809 D 525146 CDS YP_002479485.1 220904173 7284576 complement(1048647..1049801) 1 NC_011883.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dvl:Dvul_2499 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 1049801 7284576 Ddes_0900 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RND family efflux transporter MFP subunit YP_002479485.1 1048647 R 525146 CDS YP_002479486.1 220904174 7284577 1050140..1052056 1 NC_011883.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1052056 7284577 Ddes_0901 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 arginine decarboxylase YP_002479486.1 1050140 D 525146 CDS YP_002479487.1 220904175 7284578 complement(1052321..1053208) 1 NC_011883.1 KEGG: sfu:Sfum_3171 sugar kinase; sugar kinase 1053208 7284578 Ddes_0902 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sugar kinase YP_002479487.1 1052321 R 525146 CDS YP_002479488.1 220904176 7284579 complement(1053196..1053858) 1 NC_011883.1 KEGG: sfu:Sfum_3170 hypothetical protein; hypothetical protein 1053858 7284579 Ddes_0903 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479488.1 1053196 R 525146 CDS YP_002479489.1 220904177 7284580 complement(1054168..1054383) 1 NC_011883.1 KEGG: pca:Pcar_0821 hypothetical protein; hypothetical protein 1054383 7284580 Ddes_0904 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479489.1 1054168 R 525146 CDS YP_002479490.1 220904178 7284581 complement(1054383..1055477) 1 NC_011883.1 KEGG: sfu:Sfum_3168 hypothetical protein; hypothetical protein 1055477 7284581 Ddes_0905 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479490.1 1054383 R 525146 CDS YP_002479491.1 220904179 7284582 complement(1055789..1056328) 1 NC_011883.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1056328 7284582 Ddes_0906 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_002479491.1 1055789 R 525146 CDS YP_002479492.1 220904180 7284583 1056456..1056551 1 NC_011883.1 KEGG: dvl:Dvul_1688 HesB/YadR/YfhF-family protein; HesB/YadR/YfhF-family protein 1056551 7284583 Ddes_0907 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HesB/YadR/YfhF-family protein YP_002479492.1 1056456 D 525146 CDS YP_002479493.1 220904181 7284584 1056633..1056773 1 NC_011883.1 KEGG: dvl:Dvul_1688 HesB/YadR/YfhF-family protein; HesB/YadR/YfhF-family protein 1056773 7284584 Ddes_0908 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HesB/YadR/YfhF-family protein YP_002479493.1 1056633 D 525146 CDS YP_002479494.1 220904182 7284585 1056864..1057184 1 NC_011883.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: dvl:Dvul_1688 HesB/YadR/YfhF-family protein; HesB/YadR/YfhF-family protein 1057184 7284585 Ddes_0909 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HesB/YadR/YfhF-family protein YP_002479494.1 1056864 D 525146 CDS YP_002479495.1 220904183 7284586 1057280..1060819 1 NC_011883.1 KEGG: dvl:Dvul_1260 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 1060819 7284586 Ddes_0910 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transcription-repair coupling factor YP_002479495.1 1057280 D 525146 CDS YP_002479496.1 220904184 7284587 1060894..1062066 1 NC_011883.1 KEGG: dvl:Dvul_1261 hypothetical protein; hypothetical protein 1062066 7284587 Ddes_0911 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479496.1 1060894 D 525146 CDS YP_002479497.1 220904185 7284588 1062389..1063324 1 NC_011883.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: dvl:Dvul_1262 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain-containing protein 1063324 7284588 Ddes_0912 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SurA domain-containing protein YP_002479497.1 1062389 D 525146 CDS YP_002479498.1 220904186 7284589 1063466..1064410 1 NC_011883.1 KEGG: dvl:Dvul_1263 hypothetical protein; hypothetical protein 1064410 7284589 Ddes_0913 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479498.1 1063466 D 525146 CDS YP_002479499.1 220904187 7284590 1064407..1065159 1 NC_011883.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: dvl:Dvul_1264 DNA repair protein RecO; DNA repair protein RecO 1065159 7284590 Ddes_0914 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA repair protein RecO YP_002479499.1 1064407 D 525146 CDS YP_002479500.1 220904188 7284591 1065539..1066417 1 NC_011883.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1066417 glyQ 7284591 glyQ Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycyl-tRNA synthetase subunit alpha YP_002479500.1 1065539 D 525146 CDS YP_002479501.1 220904189 7284592 1066422..1068506 1 NC_011883.1 KEGG: dvu:DVU1897 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 1068506 7284592 Ddes_0916 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycyl-tRNA synthetase subunit beta YP_002479501.1 1066422 D 525146 CDS YP_002479502.1 220904190 7284593 1068804..1069073 1 NC_011883.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1069073 rpsT 7284593 rpsT Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S20 YP_002479502.1 1068804 D 525146 CDS YP_002479503.1 220904191 7284595 1069779..1071443 1 NC_011883.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rba:RB9570 hydrogenase-4 transcriptional activator; Fis family transcriptional regulator 1071443 7284595 Ddes_0918 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family transcriptional regulator YP_002479503.1 1069779 D 525146 CDS YP_002479504.1 220904192 7284596 complement(1071551..1071781) 1 NC_011883.1 PFAM: Dissimilatory sulfite reductase D; KEGG: dvl:Dvul_2530 dissimilatory sulfite reductase B; dissimilatory sulfite reductase D 1071781 7284596 Ddes_0919 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dissimilatory sulfite reductase D YP_002479504.1 1071551 R 525146 CDS YP_002479505.1 220904193 7284597 complement(1072080..1073225) 1 NC_011883.1 KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type beta subunit 1073225 7284597 Ddes_0920 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfite reductase, dissimilatory-type beta subunit YP_002479505.1 1072080 R 525146 CDS YP_002479506.1 220904194 7284598 complement(1073244..1074557) 1 NC_011883.1 KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type alpha subunit 1074557 7284598 Ddes_0921 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfite reductase, dissimilatory-type alpha subunit YP_002479506.1 1073244 R 525146 CDS YP_002479507.1 220904195 7284599 1075355..1077937 1 NC_011883.1 KEGG: gur:Gura_0826 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicases; CRISPR-associated helicase Cas3 1077937 7284599 Ddes_0922 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CRISPR-associated helicase Cas3 YP_002479507.1 1075355 D 525146 CDS YP_002479508.1 220904196 7284600 1077940..1079562 1 NC_011883.1 TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: gur:Gura_0827 CRISPR-associated CSE1 family protein; Cse1 family CRISPR-associated protein 1079562 7284600 Ddes_0923 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cse1 family CRISPR-associated protein YP_002479508.1 1077940 D 525146 CDS YP_002479509.1 220904197 7284601 1079559..1080110 1 NC_011883.1 TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; KEGG: gur:Gura_0828 hypothetical protein; Cse2 family CRISPR-associated protein 1080110 7284601 Ddes_0924 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cse2 family CRISPR-associated protein YP_002479509.1 1079559 D 525146 CDS YP_002479510.1 220904198 7284602 1080107..1080730 1 NC_011883.1 TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: gur:Gura_0829 CRISPR-associated CSE3 family protein; Cse3 family CRISPR-associated protein 1080730 7284602 Ddes_0925 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cse3 family CRISPR-associated protein YP_002479510.1 1080107 D 525146 CDS YP_002479511.1 220904199 7284603 1080761..1081813 1 NC_011883.1 TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: gur:Gura_0830 CRISPR-associated CSE4 family protein; Cse4 family CRISPR-associated protein 1081813 7284603 Ddes_0926 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cse4 family CRISPR-associated protein YP_002479511.1 1080761 D 525146 CDS YP_002479512.1 220904200 7284604 1081803..1082552 1 NC_011883.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: gur:Gura_0831 CRISPR-associated Cas5 family protein; CRISPR-associated protein Cas5 family 1082552 7284604 Ddes_0927 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CRISPR-associated protein Cas5 family YP_002479512.1 1081803 D 525146 CDS YP_002479513.1 220904201 7284605 1082536..1083447 1 NC_011883.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: pmy:Pmen_3755 CRISPR-associated Cas1 family protein; CRISPR-associated protein Cas1 1083447 7284605 Ddes_0928 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CRISPR-associated protein Cas1 YP_002479513.1 1082536 D 525146 CDS YP_002479514.1 220904202 7284606 1083428..1083736 1 NC_011883.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: mhu:Mhun_1374 hypothetical protein; CRISPR-associated protein Cas2 1083736 7284606 Ddes_0929 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CRISPR-associated protein Cas2 YP_002479514.1 1083428 D 525146 CDS YP_002479515.1 220904203 7284609 1086395..1087504 1 NC_011883.1 PFAM: conserved hypothetical protein; KEGG: dvl:Dvul_2400 hypothetical protein; hypothetical protein 1087504 7284609 Ddes_0930 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479515.1 1086395 D 525146 CDS YP_002479516.1 220904204 7284610 1087521..1087916 1 NC_011883.1 KEGG: dvl:Dvul_2399 hypothetical protein; hypothetical protein 1087916 7284610 Ddes_0931 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479516.1 1087521 D 525146 CDS YP_002479517.1 220904205 7284611 1087916..1088365 1 NC_011883.1 KEGG: dvl:Dvul_2398 hypothetical protein; hypothetical protein 1088365 7284611 Ddes_0932 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479517.1 1087916 D 525146 CDS YP_002479518.1 220904206 7284612 complement(1088619..1089509) 1 NC_011883.1 PFAM: formate/nitrite transporter; KEGG: pmr:PMI0706 probable formate transporter; formate/nitrite transporter 1089509 7284612 Ddes_0933 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formate/nitrite transporter YP_002479518.1 1088619 R 525146 CDS YP_002479519.1 220904207 7284613 complement(1090110..1090403) 1 NC_011883.1 KEGG: hypothetical protein; hypothetical protein 1090403 7284613 Ddes_0934 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479519.1 1090110 R 525146 CDS YP_002479520.1 220904208 7284614 1090443..1090697 1 NC_011883.1 hypothetical protein 1090697 7284614 Ddes_0935 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479520.1 1090443 D 525146 CDS YP_002479521.1 220904209 7284615 complement(1090971..1091543) 1 NC_011883.1 KEGG: rru:Rru_A1249 kinase-like; kinase-like protein 1091543 7284615 Ddes_0936 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 kinase-like protein YP_002479521.1 1090971 R 525146 CDS YP_002479522.1 220904210 7284616 complement(1091849..1092112) 1 NC_011883.1 KEGG: pst:PSPTO_1100 phage integrase family site specific recombinase; hypothetical protein 1092112 7284616 Ddes_0937 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479522.1 1091849 R 525146 CDS YP_002479523.1 220904211 7284618 1092438..1093493 1 NC_011883.1 PFAM: Domain of unkown function DUF1786 putative pyruvate format-lyase activating enzyme; KEGG: dvl:Dvul_0572 hypothetical protein; hypothetical protein 1093493 7284618 Ddes_0938 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479523.1 1092438 D 525146 CDS YP_002479524.1 220904212 7284619 1093579..1094877 1 NC_011883.1 KEGG: dvl:Dvul_0571 phenylacetate--CoA ligase; phenylacetate--CoA ligase 1094877 7284619 Ddes_0939 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phenylacetate--CoA ligase YP_002479524.1 1093579 D 525146 CDS YP_002479525.1 220904213 7284620 1094891..1095493 1 NC_011883.1 PFAM: protein of unknown function DUF456; KEGG: dvl:Dvul_0570 hypothetical protein; hypothetical protein 1095493 7284620 Ddes_0940 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479525.1 1094891 D 525146 CDS YP_002479526.1 220904214 7284621 1095495..1096247 1 NC_011883.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_0569 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1096247 7284621 Ddes_0941 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA/rRNA methyltransferase SpoU YP_002479526.1 1095495 D 525146 CDS YP_002479527.1 220904215 7284622 1096777..1098807 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1674 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1098807 7284622 Ddes_0942 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002479527.1 1096777 D 525146 CDS YP_002479528.1 220904216 7284623 1099092..1099358 1 NC_011883.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA; transposase IS3/IS911 family protein 1099358 7284623 Ddes_0943 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transposase IS3/IS911 family protein YP_002479528.1 1099092 D 525146 CDS YP_002479529.1 220904217 7284624 1099415..1100203 1 NC_011883.1 PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit; integrase catalytic subunit 1100203 7284624 Ddes_0944 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase catalytic subunit YP_002479529.1 1099415 D 525146 CDS YP_002479530.1 220904218 7284625 1100742..1102769 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1674 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1102769 7284625 Ddes_0945 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002479530.1 1100742 D 525146 CDS YP_002479531.1 220904219 7284626 complement(1103026..1104129) 1 NC_011883.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1104129 7284626 Ddes_0946 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTP-dependent nucleic acid-binding protein EngD YP_002479531.1 1103026 R 525146 CDS YP_002479532.1 220904220 7284627 complement(1104382..1104996) 1 NC_011883.1 KEGG: dvl:Dvul_1731 hypothetical protein; hypothetical protein 1104996 7284627 Ddes_0947 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479532.1 1104382 R 525146 CDS YP_002479533.1 220904221 7284628 complement(1105007..1105357) 1 NC_011883.1 hypothetical protein 1105357 7284628 Ddes_0948 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479533.1 1105007 R 525146 CDS YP_002479534.1 220904222 7284629 complement(1105373..1106077) 1 NC_011883.1 KEGG: dvl:Dvul_1729 putative lipoprotein; hypothetical protein 1106077 7284629 Ddes_0949 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479534.1 1105373 R 525146 CDS YP_002479535.1 220904223 7284630 1106304..1107374 1 NC_011883.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1107374 ispG 7284630 ispG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002479535.1 1106304 D 525146 CDS YP_002479536.1 220904224 7284631 1107374..1109098 1 NC_011883.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1109098 7284631 Ddes_0951 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 prolyl-tRNA synthetase YP_002479536.1 1107374 D 525146 CDS YP_002479537.1 220904225 7284632 1109492..1110982 1 NC_011883.1 KEGG: dvu:DVU1346 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 1110982 7284632 Ddes_0952 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 exodeoxyribonuclease VII large subunit YP_002479537.1 1109492 D 525146 CDS YP_002479538.1 220904226 7284633 1110979..1111989 1 NC_011883.1 PFAM: Peptidase M23; KEGG: dvl:Dvul_1721 peptidase M23B; peptidase M23 1111989 7284633 Ddes_0953 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M23 YP_002479538.1 1110979 D 525146 CDS YP_002479539.1 220904227 7284634 1111995..1112267 1 NC_011883.1 PFAM: Exonuclease VII small subunit; KEGG: dvl:Dvul_1720 exonuclease VII, small subunit; Exonuclease VII small subunit 1112267 7284634 Ddes_0954 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Exonuclease VII small subunit YP_002479539.1 1111995 D 525146 CDS YP_002479540.1 220904228 7284635 1112280..1113176 1 NC_011883.1 PFAM: Polyprenyl synthetase; KEGG: dvl:Dvul_1719 polyprenyl synthetase; polyprenyl synthetase 1113176 7284635 Ddes_0955 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polyprenyl synthetase YP_002479540.1 1112280 D 525146 CDS YP_002479541.1 220904229 7284636 1113247..1115181 1 NC_011883.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1115181 7284636 Ddes_0956 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 1-deoxy-D-xylulose-5-phosphate synthase YP_002479541.1 1113247 D 525146 CDS YP_002479542.1 220904230 7284637 complement(1116118..1117251) 1 NC_011883.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: dvl:Dvul_1620 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 1117251 7284637 Ddes_0957 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA(Ile)-lysidine synthetase YP_002479542.1 1116118 R 525146 CDS YP_002479543.1 220904231 7284638 complement(1118069..1118404) 1 NC_011883.1 KEGG: dvl:Dvul_1619 hypothetical protein; hypothetical protein 1118404 7284638 Ddes_0958 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479543.1 1118069 R 525146 CDS YP_002479544.1 220904232 7284639 complement(1118404..1119696) 1 NC_011883.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1119696 hemA 7284639 hemA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamyl-tRNA reductase YP_002479544.1 1118404 R 525146 CDS YP_002479545.1 220904233 7284640 complement(1119711..1120538) 1 NC_011883.1 PFAM: cytochrome c assembly protein; KEGG: dvl:Dvul_1617 cytochrome c assembly protein; cytochrome c assembly protein 1120538 7284640 Ddes_0960 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c assembly protein YP_002479545.1 1119711 R 525146 CDS YP_002479546.1 220904234 7284641 complement(1120525..1121229) 1 NC_011883.1 TIGRFAM: siroheme synthase; KEGG: dvu:DVU1463 siroheme synthase; siroheme synthase 1121229 7284641 Ddes_0961 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 siroheme synthase YP_002479546.1 1120525 R 525146 CDS YP_002479547.1 220904235 7284642 1121435..1122724 1 NC_011883.1 KEGG: dvu:DVU1464 heptosyltransferase family protein; heptosyltransferase family protein 1122724 7284642 Ddes_0962 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heptosyltransferase family protein YP_002479547.1 1121435 D 525146 CDS YP_002479548.1 220904236 7284643 1122741..1124084 1 NC_011883.1 KEGG: dvl:Dvul_1614 hypothetical protein; hypothetical protein 1124084 7284643 Ddes_0963 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479548.1 1122741 D 525146 CDS YP_002479549.1 220904237 7284644 complement(1124297..1125481) 1 NC_011883.1 KEGG: dvl:Dvul_1157 hypothetical protein; hypothetical protein 1125481 7284644 Ddes_0964 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479549.1 1124297 R 525146 CDS YP_002479550.1 220904238 7284645 1125679..1127142 1 NC_011883.1 TIGRFAM: tol-pal system protein YbgF; KEGG: dvl:Dvul_1158 TPR repeat-containing protein; tol-pal system protein YbgF 1127142 7284645 Ddes_0965 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tol-pal system protein YbgF YP_002479550.1 1125679 D 525146 CDS YP_002479551.1 220904239 7284646 1127144..1128472 1 NC_011883.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: dvl:Dvul_1159 DNA protecting protein DprA; DNA protecting protein DprA 1128472 7284646 Ddes_0966 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA protecting protein DprA YP_002479551.1 1127144 D 525146 CDS YP_002479552.1 220904240 7284647 1128469..1129590 1 NC_011883.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: lip:LI0111 site-specific recombinase XerC; integrase family protein 1129590 7284647 Ddes_0967 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase family protein YP_002479552.1 1128469 D 525146 CDS YP_002479553.1 220904241 7284648 1129776..1130693 1 NC_011883.1 catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase 1130693 7284648 Ddes_0968 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative manganese-dependent inorganic pyrophosphatase YP_002479553.1 1129776 D 525146 CDS YP_002479554.1 220904242 7284649 complement(1130895..1131341) 1 NC_011883.1 KEGG: dvl:Dvul_1499 hypothetical protein; hypothetical protein 1131341 7284649 Ddes_0969 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479554.1 1130895 R 525146 CDS YP_002479555.1 220904243 7284650 complement(1131573..1132031) 1 NC_011883.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: dvl:Dvul_1500 PTS system sorbose subfamily IIB component; PTS system sorbose subfamily transporter subunit IIB 1132031 7284650 Ddes_0970 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PTS system sorbose subfamily transporter subunit IIB YP_002479555.1 1131573 R 525146 CDS YP_002479556.1 220904244 7284651 complement(1132033..1132476) 1 NC_011883.1 PFAM: PTS system fructose subfamily IIA component; KEGG: dvl:Dvul_1501 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 1132476 7284651 Ddes_0971 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PTS system fructose subfamily transporter subunit IIA YP_002479556.1 1132033 R 525146 CDS YP_002479557.1 220904245 7284652 complement(1132511..1133443) 1 NC_011883.1 PFAM: conserved hypothetical protein; KEGG: dvl:Dvul_1502 hypothetical protein; hypothetical protein 1133443 7284652 Ddes_0972 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479557.1 1132511 R 525146 CDS YP_002479558.1 220904246 7284653 complement(1133510..1134049) 1 NC_011883.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: dvl:Dvul_1504 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30EA 1134049 7284653 Ddes_0973 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sigma 54 modulation protein/30S ribosomal protein S30EA YP_002479558.1 1133510 R 525146 CDS YP_002479559.1 220904247 7284654 complement(1134210..1135634) 1 NC_011883.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: dvl:Dvul_1505 RNA polymerase, sigma 54 subunit, RpoN; RNA polymerase sigma-54 subunit RpoN 1135634 7284654 Ddes_0974 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RNA polymerase sigma-54 subunit RpoN YP_002479559.1 1134210 R 525146 CDS YP_002479560.1 220904248 7284655 complement(1135941..1137584) 1 NC_011883.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1137584 pyrG 7284655 pyrG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CTP synthetase YP_002479560.1 1135941 R 525146 CDS YP_002479561.1 220904249 7284656 1137845..1138654 1 NC_011883.1 KEGG: dvl:Dvul_1512 phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase 1138654 7284656 Ddes_0976 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylformylglycinamidine synthase YP_002479561.1 1137845 D 525146 CDS YP_002479562.1 220904250 7284657 complement(1138901..1140043) 1 NC_011883.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: dvl:Dvul_1164 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 1140043 7284657 Ddes_0977 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-nitropropane dioxygenase YP_002479562.1 1138901 R 525146 CDS YP_002479563.1 220904251 7284658 complement(1140205..1143207) 1 NC_011883.1 KEGG: dvl:Dvul_1165 hypothetical protein; hypothetical protein 1143207 7284658 Ddes_0978 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479563.1 1140205 R 525146 CDS YP_002479564.1 220904252 7284659 complement(1143200..1146721) 1 NC_011883.1 PFAM: UvrD/REP helicase; KEGG: dvu:DVU2062 ATP-dependent DNA helicase UvrD; UvrD/REP helicase 1146721 7284659 Ddes_0979 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UvrD/REP helicase YP_002479564.1 1143200 R 525146 CDS YP_002479565.1 220904253 7284660 complement(1146946..1147899) 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pap:PSPA7_1904 RhaT protein; hypothetical protein 1147899 7284660 Ddes_0980 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479565.1 1146946 R 525146 CDS YP_002479566.1 220904254 7284661 1148138..1148560 1 NC_011883.1 KEGG: dvl:Dvul_0935 hypothetical protein; hypothetical protein 1148560 7284661 Ddes_0981 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479566.1 1148138 D 525146 CDS YP_002479567.1 220904255 7284662 1148739..1149164 1 NC_011883.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1149164 7284662 Ddes_0982 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate alpha-decarboxylase YP_002479567.1 1148739 D 525146 CDS YP_002479568.1 220904256 7284663 complement(1149243..1150664) 1 NC_011883.1 PFAM: amino acid permease-associated region; KEGG: smt:Smal_0405 amino acid permease-associated region; amino acid permease-associated protein 1150664 7284663 Ddes_0983 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid permease-associated protein YP_002479568.1 1149243 R 525146 CDS YP_002479569.1 220904257 7284664 complement(1150856..1151389) 1 NC_011883.1 hypothetical protein 1151389 7284664 Ddes_0984 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479569.1 1150856 R 525146 CDS YP_002479570.1 220904258 7284665 complement(1151875..1152879) 1 NC_011883.1 PFAM: heat shock protein DnaJ domain protein; KEGG: dvu:DVU1003 DnaJ domain-containing protein; heat shock protein DnaJ domain-containing protein 1152879 7284665 Ddes_0985 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heat shock protein DnaJ domain-containing protein YP_002479570.1 1151875 R 525146 CDS YP_002479571.1 220904259 7284666 complement(1152883..1153332) 1 NC_011883.1 PFAM: protein of unknown function UPF0153; KEGG: dvl:Dvul_1987 hypothetical protein; hypothetical protein 1153332 7284666 Ddes_0986 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479571.1 1152883 R 525146 CDS YP_002479572.1 220904260 7284667 complement(1153336..1153767) 1 NC_011883.1 KEGG: dvl:Dvul_1988 CoA-binding domain-containing protein; CoA-binding domain-containing protein 1153767 7284667 Ddes_0987 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CoA-binding domain-containing protein YP_002479572.1 1153336 R 525146 CDS YP_002479573.1 220904261 7284668 complement(1154343..1156373) 1 NC_011883.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: dvu:DVU2302 glutathione-regulated potassium-efflux system protein KefB, putative; sodium/hydrogen exchanger 1156373 7284668 Ddes_0988 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sodium/hydrogen exchanger YP_002479573.1 1154343 R 525146 CDS YP_002479574.1 220904262 7284669 complement(1156749..1157498) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pho:PH1235 ferrichrome transport ATP-binding protein; ABC transporter-like protein 1157498 7284669 Ddes_0989 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479574.1 1156749 R 525146 CDS YP_002479575.1 220904263 7284670 complement(1157491..1158627) 1 NC_011883.1 PFAM: transport system permease protein; KEGG: dol:Dole_1652 transport system permease protein; transport system permease 1158627 7284670 Ddes_0990 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transport system permease YP_002479575.1 1157491 R 525146 CDS YP_002479576.1 220904264 7284671 complement(1158617..1159696) 1 NC_011883.1 PFAM: periplasmic binding protein; KEGG: pab:PAB0676 iron (III) ABC transporter, ATP-binding protein (hemv-3); periplasmic binding protein 1159696 7284671 Ddes_0991 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 periplasmic binding protein YP_002479576.1 1158617 R 525146 CDS YP_002479577.1 220904265 7284672 complement(1159681..1160448) 1 NC_011883.1 PFAM: Methyltransferase type 11; KEGG: ccv:CCV52592_0091 hypothetical protein; type 11 methyltransferase 1160448 7284672 Ddes_0992 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 11 methyltransferase YP_002479577.1 1159681 R 525146 CDS YP_002479578.1 220904266 7284673 complement(1160436..1162643) 1 NC_011883.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ppd:Ppro_1253 TonB-dependent receptor, plug; TonB-dependent receptor 1162643 7284673 Ddes_0993 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TonB-dependent receptor YP_002479578.1 1160436 R 525146 CDS YP_002479579.1 220904267 7284674 complement(1162771..1163307) 1 NC_011883.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: det:DET1173 FwdE family protein; formylmethanofuran dehydrogenase subunit E 1163307 7284674 Ddes_0994 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formylmethanofuran dehydrogenase subunit E YP_002479579.1 1162771 R 525146 CDS YP_002479580.1 220904268 7284675 complement(1163684..1164784) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mma:MM_2563 ferredoxin; 4Fe-4S ferredoxin 1164784 7284675 Ddes_0995 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479580.1 1163684 R 525146 CDS YP_002479581.1 220904269 7284676 1164998..1165624 1 NC_011883.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: dvl:Dvul_1968 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 1165624 7284676 Ddes_0996 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 uracil phosphoribosyltransferase YP_002479581.1 1164998 D 525146 CDS YP_002479582.1 220904270 7284677 1165660..1166919 1 NC_011883.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: dvl:Dvul_1967 uracil-xanthine permease; uracil-xanthine permease 1166919 7284677 Ddes_0997 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 uracil-xanthine permease YP_002479582.1 1165660 D 525146 CDS YP_002479583.1 220904271 7284678 1167304..1167468 1 NC_011883.1 hypothetical protein 1167468 7284678 Ddes_0998 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479583.1 1167304 D 525146 CDS YP_002479584.1 220904272 7284679 complement(1167594..1168463) 1 NC_011883.1 KEGG: dvl:Dvul_0609 putative lipoprotein; putative lipoprotein 1168463 7284679 Ddes_0999 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative lipoprotein YP_002479584.1 1167594 R 525146 CDS YP_002479585.1 220904273 7284680 1168485..1169699 1 NC_011883.1 KEGG: smt:Smal_1211 secretion protein HlyD family protein; Multidrug resistance efflux pump-like protein 1169699 7284680 Ddes_1000 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Multidrug resistance efflux pump-like protein YP_002479585.1 1168485 D 525146 CDS YP_002479586.1 220904274 7284681 complement(1170018..1171760) 1 NC_011883.1 PFAM: TPR repeat-containing protein; protein of unknown function DUF181; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_1028 hypothetical protein; hypothetical protein 1171760 7284681 Ddes_1001 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479586.1 1170018 R 525146 CDS YP_002479587.1 220904275 7284682 complement(1171757..1172479) 1 NC_011883.1 PFAM: methyltransferase small; KEGG: dvl:Dvul_1029 methyltransferase small; methyltransferase small 1172479 7284682 Ddes_1002 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyltransferase small YP_002479587.1 1171757 R 525146 CDS YP_002479588.1 220904276 7284683 complement(1172656..1172799) 1 NC_011883.1 hypothetical protein 1172799 7284683 Ddes_1003 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479588.1 1172656 R 525146 CDS YP_002479589.1 220904277 7284684 1172855..1173703 1 NC_011883.1 PFAM: ribosomal L11 methyltransferase; KEGG: dvl:Dvul_0920 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase 1173703 7284684 Ddes_1004 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribosomal L11 methyltransferase YP_002479589.1 1172855 D 525146 CDS YP_002479590.1 220904278 7284685 1173719..1174072 1 NC_011883.1 hypothetical protein 1174072 7284685 Ddes_1005 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479590.1 1173719 D 525146 CDS YP_002479591.1 220904279 7284686 complement(1174283..1175095) 1 NC_011883.1 PFAM: Peptidase M23; KEGG: cya:CYA_1895 M23B family peptidase; peptidase M23 1175095 7284686 Ddes_1006 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M23 YP_002479591.1 1174283 R 525146 CDS YP_002479592.1 220904280 7284687 1175327..1176187 1 NC_011883.1 PFAM: Pirin domain protein; KEGG: lip:LI0289 pirin-related protein; Pirin domain-containing protein 1176187 7284687 Ddes_1007 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Pirin domain-containing protein YP_002479592.1 1175327 D 525146 CDS YP_002479593.1 220904281 7284688 1176362..1177438 1 NC_011883.1 PFAM: periplasmic solute binding protein; KEGG: cyb:CYB_0144 putative zinc ABC transporter, periplasmic zinc-binding protein; periplasmic solute binding protein 1177438 7284688 Ddes_1008 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 periplasmic solute binding protein YP_002479593.1 1176362 D 525146 CDS YP_002479594.1 220904282 7284689 1177425..1178351 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_4497 ABC transporter related; ABC transporter-like protein 1178351 7284689 Ddes_1009 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479594.1 1177425 D 525146 CDS YP_002479595.1 220904283 7284690 1178344..1179210 1 NC_011883.1 PFAM: ABC-3 protein; KEGG: cpy:Cphy_3489 ABC-3 protein; ABC-3 protein 1179210 7284690 Ddes_1010 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC-3 protein YP_002479595.1 1178344 D 525146 CDS YP_002479596.1 220904284 7284691 complement(1179297..1179800) 1 NC_011883.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: dvl:Dvul_1832 redoxin domain-containing protein; redoxin domain-containing protein 1179800 7284691 Ddes_1011 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 redoxin domain-containing protein YP_002479596.1 1179297 R 525146 CDS YP_002479597.1 220904285 7284692 1180342..1181655 1 NC_011883.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1181655 hslU 7284692 hslU Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent protease ATP-binding subunit HslU YP_002479597.1 1180342 D 525146 CDS YP_002479598.1 220904286 7284693 1182490..1184928 1 NC_011883.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: afw:Anae109_1408 glycosyl transferase family protein; group 1 glycosyl transferase 1184928 7284693 Ddes_1013 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002479598.1 1182490 D 525146 CDS YP_002479599.1 220904287 7284694 1184954..1188421 1 NC_011883.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_4738 methyltransferase type 11; type 11 methyltransferase 1188421 7284694 Ddes_1014 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 11 methyltransferase YP_002479599.1 1184954 D 525146 CDS YP_002479600.1 220904288 7284695 1188433..1189551 1 NC_011883.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bpy:Bphyt_0888 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1189551 7284695 Ddes_1015 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-N-acetylglucosamine 2-epimerase YP_002479600.1 1188433 D 525146 CDS YP_002479601.1 220904289 7284696 1189611..1190558 1 NC_011883.1 PFAM: LicD family protein; KEGG: cpf:CPF_0917 LicD family protein; LicD family protein 1190558 7284696 Ddes_1016 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 LicD family protein YP_002479601.1 1189611 D 525146 CDS YP_002479602.1 220904290 7284697 1190760..1191374 1 NC_011883.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hhe:HH0078 phosphoserine phosphatase; HAD-superfamily hydrolase 1191374 7284697 Ddes_1017 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HAD-superfamily hydrolase YP_002479602.1 1190760 D 525146 CDS YP_002479603.1 220904291 7284698 1191332..1191970 1 NC_011883.1 KEGG: hhe:HH0077 hypothetical protein; hypothetical protein 1191970 7284698 Ddes_1018 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479603.1 1191332 D 525146 CDS YP_002479604.1 220904292 7284699 complement(1191973..1192608) 1 NC_011883.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hhe:HH0074 hypothetical protein; type 12 methyltransferase 1192608 7284699 Ddes_1019 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 12 methyltransferase YP_002479604.1 1191973 R 525146 CDS YP_002479605.1 220904293 7284700 complement(1192598..1193314) 1 NC_011883.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: hhe:HH0075 aspartate racemase; aspartate racemase 1193314 7284700 Ddes_1020 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate racemase YP_002479605.1 1192598 R 525146 CDS YP_002479606.1 220904294 7284702 1194518..1196533 1 NC_011883.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: dvl:Dvul_1990 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane subunit 1196533 7284702 Ddes_1021 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c biogenesis protein transmembrane subunit YP_002479606.1 1194518 D 525146 CDS YP_002479607.1 220904295 7284703 1196668..1197144 1 NC_011883.1 PFAM: CheW domain protein; KEGG: dvl:Dvul_1259 putative CheW protein; CheW protein 1197144 7284703 Ddes_1022 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CheW protein YP_002479607.1 1196668 D 525146 CDS YP_002479608.1 220904296 7284704 1197683..1198201 1 NC_011883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cbf:CLI_1065 acetyltransferase; N-acetyltransferase GCN5 1198201 7284704 Ddes_1023 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002479608.1 1197683 D 525146 CDS YP_002479609.1 220904297 7284705 complement(1198176..1198406) 1 NC_011883.1 KEGG: dvl:Dvul_1258 hypothetical protein; hypothetical protein 1198406 7284705 Ddes_1024 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479609.1 1198176 R 525146 CDS YP_002479610.1 220904298 7284706 complement(1198486..1201254) 1 NC_011883.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1432 radical SAM domain-containing protein; radical SAM protein 1201254 7284706 Ddes_1025 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002479610.1 1198486 R 525146 CDS YP_002479611.1 220904299 7284707 complement(1201659..1202000) 1 NC_011883.1 KEGG: dvl:Dvul_1643 hypothetical protein; hypothetical protein 1202000 7284707 Ddes_1026 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479611.1 1201659 R 525146 CDS YP_002479612.1 220904300 7284708 1202102..1202833 1 NC_011883.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1202833 rnc 7284708 rnc Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribonuclease III YP_002479612.1 1202102 D 525146 CDS YP_002479613.1 220904301 7284709 complement(1203007..1203915) 1 NC_011883.1 PFAM: flagellin domain protein; KEGG: dvl:Dvul_0790 flagellin domain-containing protein; flagellin domain-containing protein 1203915 7284709 Ddes_1028 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellin domain-containing protein YP_002479613.1 1203007 R 525146 CDS YP_002479614.1 220904302 7284710 complement(1204338..1205972) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2048 ABC transporter ATP-binding protein; ABC transporter-like protein 1205972 7284710 Ddes_1029 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479614.1 1204338 R 525146 CDS YP_002479615.1 220904303 7284711 complement(1205974..1206786) 1 NC_011883.1 with NikABDE is involved in nickel transport into the cell; nickel transporter permease NikC 1206786 nikC 7284711 nikC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nickel transporter permease NikC YP_002479615.1 1205974 R 525146 CDS YP_002479616.1 220904304 7284712 complement(1206783..1207721) 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_03851 nickel transport protein (ABC superfamily, membrane); binding-protein-dependent transport system inner membrane protein 1207721 7284712 Ddes_1031 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002479616.1 1206783 R 525146 CDS YP_002479617.1 220904305 7284713 complement(1207870..1209504) 1 NC_011883.1 KEGG: rru:Rru_A2277 nickel ABC transporter, periplasmic nickel-binding; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5; nickel ABC transporter substrate-binding protein 1209504 7284713 Ddes_1032 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nickel ABC transporter substrate-binding protein YP_002479617.1 1207870 R 525146 CDS YP_002479618.1 220904306 7284714 1210401..1211843 1 NC_011883.1 PFAM: conserved hypothetical protein; KEGG: drm:Dred_1452 hypothetical protein; hypothetical protein 1211843 7284714 Ddes_1033 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479618.1 1210401 D 525146 CDS YP_002479619.1 220904307 7284715 1211861..1212025 1 NC_011883.1 KEGG: tye:THEYE_A0243 hypothetical protein; hypothetical protein 1212025 7284715 Ddes_1034 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479619.1 1211861 D 525146 CDS YP_002479620.1 220904308 7284716 1212104..1212328 1 NC_011883.1 hypothetical protein 1212328 7284716 Ddes_1035 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479620.1 1212104 D 525146 CDS YP_002479621.1 220904309 7284717 1212334..1212768 1 NC_011883.1 PFAM: protein of unknown function DUF523; KEGG: dvl:Dvul_2924 hypothetical protein; hypothetical protein 1212768 7284717 Ddes_1036 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479621.1 1212334 D 525146 CDS YP_002479622.1 220904310 7284718 complement(1213288..1213773) 1 NC_011883.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; KEGG: dvl:Dvul_1244 hydrogenase expression/formation protein; hydrogenase expression/formation protein 1213773 7284718 Ddes_1037 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase expression/formation protein YP_002479622.1 1213288 R 525146 CDS YP_002479623.1 220904311 7284719 complement(1213853..1215529) 1 NC_011883.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: dvl:Dvul_1245 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 1215529 7284719 Ddes_1038 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nickel-dependent hydrogenase large subunit YP_002479623.1 1213853 R 525146 CDS YP_002479624.1 220904312 7284720 complement(1215541..1216488) 1 NC_011883.1 KEGG: dvl:Dvul_1246 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA 1216488 7284720 Ddes_1039 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase (NiFe) small subunit HydA YP_002479624.1 1215541 R 525146 CDS YP_002479625.1 220904313 7284721 1216949..1218295 1 NC_011883.1 KEGG: cbt:CLH_0332 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 1218295 7284721 Ddes_1040 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_002479625.1 1216949 D 525146 CDS YP_002479626.1 220904314 7284722 complement(1218492..1219268) 1 NC_011883.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: dvu:DVU2655 D-alanyl-D-alanine carboxypeptidase family protein; serine-type D-Ala-D-Ala carboxypeptidase 1219268 7284722 Ddes_1041 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 serine-type D-Ala-D-Ala carboxypeptidase YP_002479626.1 1218492 R 525146 CDS YP_002479627.1 220904315 7284723 complement(1219506..1220612) 1 NC_011883.1 PFAM: protein of unknown function UPF0118; KEGG: lip:LI0472 permease; hypothetical protein 1220612 7284723 Ddes_1042 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479627.1 1219506 R 525146 CDS YP_002479628.1 220904316 7284724 1221201..1224230 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: met:M446_0315 glycosyl transferase family protein; family 2 glycosyl transferase 1224230 7284724 Ddes_1043 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002479628.1 1221201 D 525146 CDS YP_002479629.1 220904317 7284725 complement(1224388..1224876) 1 NC_011883.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1224876 greA 7284725 greA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transcription elongation factor GreA YP_002479629.1 1224388 R 525146 CDS YP_002479630.1 220904318 7284726 1225333..1226886 1 NC_011883.1 KEGG: dvl:Dvul_1685 hypothetical protein; hypothetical protein 1226886 7284726 Ddes_1045 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479630.1 1225333 D 525146 CDS YP_002479631.1 220904319 7284727 complement(1227119..1227790) 1 NC_011883.1 PFAM: surface antigen msp4 family protein; KEGG: seh:SeHA_C4728 heat resistant agglutinin 1; surface antigen msp4 family protein 1227790 7284727 Ddes_1046 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 surface antigen msp4 family protein YP_002479631.1 1227119 R 525146 CDS YP_002479632.1 220904320 7284729 complement(1228769..1228909) 1 NC_011883.1 hypothetical protein 1228909 7284729 Ddes_1047 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479632.1 1228769 R 525146 CDS YP_002479633.1 220904321 7284730 complement(1228920..1229690) 1 NC_011883.1 KEGG: dvl:Dvul_2180 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1229690 7284730 Ddes_1048 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 short-chain dehydrogenase/reductase SDR YP_002479633.1 1228920 R 525146 CDS YP_002479634.1 220904322 7284731 1229776..1229922 1 NC_011883.1 hypothetical protein 1229922 7284731 Ddes_1049 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479634.1 1229776 D 525146 CDS YP_002479635.1 220904323 7284732 complement(1230033..1230914) 1 NC_011883.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1230914 7284732 Ddes_1050 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002479635.1 1230033 R 525146 CDS YP_002479636.1 220904324 7284733 complement(1230940..1232244) 1 NC_011883.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1232244 hisD 7284733 hisD Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidinol dehydrogenase YP_002479636.1 1230940 R 525146 CDS YP_002479637.1 220904325 7284734 complement(1232624..1233883) 1 NC_011883.1 hypothetical protein 1233883 7284734 Ddes_1052 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479637.1 1232624 R 525146 CDS YP_002479638.1 220904326 7284735 1234220..1234843 1 NC_011883.1 PFAM: GrpE protein; KEGG: dvl:Dvul_2165 GrpE protein; GrpE protein HSP-70 cofactor 1234843 7284735 Ddes_1053 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GrpE protein HSP-70 cofactor YP_002479638.1 1234220 D 525146 CDS YP_002479639.1 220904327 7284736 complement(1234987..1236066) 1 NC_011883.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mgm:Mmc1_3072 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 1236066 7284736 Ddes_1054 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver modulated metal dependent phosphohydrolase YP_002479639.1 1234987 R 525146 CDS YP_002479640.1 220904328 7284737 complement(1236063..1236659) 1 NC_011883.1 PFAM: protein of unknown function DUF330; KEGG: sfu:Sfum_2417 protein of unknown function DUF330; hypothetical protein 1236659 7284737 Ddes_1055 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479640.1 1236063 R 525146 CDS YP_002479641.1 220904329 7284738 complement(1236659..1237627) 1 NC_011883.1 PFAM: Mammalian cell entry related domain protein; KEGG: gur:Gura_2635 hypothetical protein; mammalian cell entry domain-containing protein 1237627 7284738 Ddes_1056 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 mammalian cell entry domain-containing protein YP_002479641.1 1236659 R 525146 CDS YP_002479642.1 220904330 7284739 complement(1237624..1238520) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2415 ABC transporter related; ABC transporter-like protein 1238520 7284739 Ddes_1057 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479642.1 1237624 R 525146 CDS YP_002479643.1 220904331 7284740 complement(1238606..1239733) 1 NC_011883.1 PFAM: protein of unknown function DUF140; KEGG: lip:LI1047 ABC-type transport system involved in resistance to organic solvents, permease component; hypothetical protein 1239733 7284740 Ddes_1058 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479643.1 1238606 R 525146 CDS YP_002479644.1 220904332 7284741 1239824..1242589 1 NC_011883.1 KEGG: lip:LI0102 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 1242589 7284741 Ddes_1059 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA polymerase I YP_002479644.1 1239824 D 525146 CDS YP_002479645.1 220904333 7284742 complement(1242745..1243587) 1 NC_011883.1 hypothetical protein 1243587 7284742 Ddes_1060 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479645.1 1242745 R 525146 CDS YP_002479646.1 220904334 7284743 complement(1243770..1245011) 1 NC_011883.1 KEGG: dvl:Dvul_0727 hypothetical protein; hypothetical protein 1245011 7284743 Ddes_1061 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479646.1 1243770 R 525146 CDS YP_002479647.1 220904335 7284744 1245274..1245708 1 NC_011883.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1245708 rplM 7284744 rplM Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L13 YP_002479647.1 1245274 D 525146 CDS YP_002479648.1 220904336 7284745 1245722..1246114 1 NC_011883.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1246114 rpsI 7284745 rpsI Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S9 YP_002479648.1 1245722 D 525146 CDS YP_002479649.1 220904337 7284746 1246294..1248108 1 NC_011883.1 PFAM: protein of unknown function DUF181; KEGG: dvl:Dvul_1835 hypothetical protein; hypothetical protein 1248108 7284746 Ddes_1064 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479649.1 1246294 D 525146 CDS YP_002479650.1 220904338 7284747 1248228..1249373 1 NC_011883.1 PFAM: Extracellular ligand-binding receptor; KEGG: lip:LI0496 branched chain amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular ligand-binding receptor 1249373 7284747 Ddes_1065 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 extracellular ligand-binding receptor YP_002479650.1 1248228 D 525146 CDS YP_002479651.1 220904339 7284748 1249505..1250398 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: lip:LI0497 branched chain amino acid ABC transporter, permease protein; inner-membrane translocator 1250398 7284748 Ddes_1066 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002479651.1 1249505 D 525146 CDS YP_002479652.1 220904340 7284749 1250398..1251438 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: lip:LI0498 branched chain amino acid ABC transporter, permease protein; inner-membrane translocator 1251438 7284749 Ddes_1067 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002479652.1 1250398 D 525146 CDS YP_002479653.1 220904341 7284750 1251435..1252256 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lip:LI0499 branched chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 1252256 7284750 Ddes_1068 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479653.1 1251435 D 525146 CDS YP_002479654.1 220904342 7284751 1252311..1253033 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lip:LI0500 branched chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 1253033 7284751 Ddes_1069 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479654.1 1252311 D 525146 CDS YP_002479655.1 220904343 7284752 1253230..1255866 1 NC_011883.1 PFAM: peptidase M16 domain protein; KEGG: dvl:Dvul_1646 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein 1255866 7284752 Ddes_1070 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M16 domain-containing protein YP_002479655.1 1253230 D 525146 CDS YP_002479656.1 220904344 7284753 1256611..1256727 1 NC_011883.1 hypothetical protein 1256727 7284753 Ddes_1071 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479656.1 1256611 D 525146 CDS YP_002479657.1 220904345 7284755 1259461..1259976 1 NC_011883.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: ENSAPMG00000014641; . ; K04068 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 1259976 7284755 Ddes_1073 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anaerobic ribonucleoside-triphosphate reductase activating protein YP_002479657.1 1259461 D 525146 CDS YP_002479658.1 220904346 7284756 complement(1260276..1261358) 1 NC_011883.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pca:Pcar_0508 hemerythrin; hemerythrin-like metal-binding protein 1261358 7284756 Ddes_1074 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hemerythrin-like metal-binding protein YP_002479658.1 1260276 R 525146 CDS YP_002479659.1 220904347 7284757 complement(1261595..1262749) 1 NC_011883.1 TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dvu:DVU0664 cysteine desulfurase; cysteine desulfurase NifS 1262749 7284757 Ddes_1075 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cysteine desulfurase NifS YP_002479659.1 1261595 R 525146 CDS YP_002479660.1 220904348 7284758 complement(1262754..1263590) 1 NC_011883.1 TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: dvl:Dvul_2295 Fe-S cluster assembly protein NifU; Fe-S cluster assembly protein NifU 1263590 7284758 Ddes_1076 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fe-S cluster assembly protein NifU YP_002479660.1 1262754 R 525146 CDS YP_002479661.1 220904349 7284759 complement(1263574..1264017) 1 NC_011883.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ttj:TTHA0455 rrf2 family protein, transcriptional regulator; BadM/Rrf2 family transcriptional regulator 1264017 7284759 Ddes_1077 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 BadM/Rrf2 family transcriptional regulator YP_002479661.1 1263574 R 525146 CDS YP_002479662.1 220904350 7284760 complement(1264052..1264996) 1 NC_011883.1 PFAM: homoserine O-succinyltransferase; KEGG: afl:Aflv_1464 homoserine O-succinyltransferase; Homoserine O-succinyltransferase 1264996 7284760 Ddes_1078 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Homoserine O-succinyltransferase YP_002479662.1 1264052 R 525146 CDS YP_002479663.1 220904351 7284761 complement(1265188..1265910) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0703 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1265910 7284761 Ddes_1079 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479663.1 1265188 R 525146 CDS YP_002479664.1 220904352 7284762 complement(1265913..1266569) 1 NC_011883.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hmo:HM1_1613 phosphoglycolate phosphatase, putative; HAD-superfamily hydrolase 1266569 7284762 Ddes_1080 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HAD-superfamily hydrolase YP_002479664.1 1265913 R 525146 CDS YP_002479665.1 220904353 7284763 1266840..1267733 1 NC_011883.1 PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: dvl:Dvul_1899 ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region 1267733 7284763 Ddes_1081 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_002479665.1 1266840 D 525146 CDS YP_002479666.1 220904354 7284764 complement(1268214..1268780) 1 NC_011883.1 hypothetical protein 1268780 7284764 Ddes_1082 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479666.1 1268214 R 525146 CDS YP_002479667.1 220904355 7284765 complement(1268762..1269538) 1 NC_011883.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: xau:Xaut_1874 ExsB protein; exsB protein 1269538 7284765 Ddes_1083 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 exsB protein YP_002479667.1 1268762 R 525146 CDS YP_002479668.1 220904356 7284766 complement(1269535..1270536) 1 NC_011883.1 PFAM: nuclease (SNase domain protein); KEGG: dvl:Dvul_1371 nuclease; nuclease 1270536 7284766 Ddes_1084 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nuclease YP_002479668.1 1269535 R 525146 CDS YP_002479669.1 220904357 7284767 complement(1270700..1272469) 1 NC_011883.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: dvl:Dvul_1370 RpoD family RNA polymerase sigma factor; RpoD subfamily RNA polymerase sigma-70 subunit 1272469 7284767 Ddes_1085 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RpoD subfamily RNA polymerase sigma-70 subunit YP_002479669.1 1270700 R 525146 CDS YP_002479670.1 220904358 7284768 complement(1272456..1274198) 1 NC_011883.1 KEGG: dvl:Dvul_1369 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 1274198 7284768 Ddes_1086 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA primase YP_002479670.1 1272456 R 525146 CDS YP_002479671.1 220904359 7284769 complement(1274486..1276939) 1 NC_011883.1 PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; KEGG: dvu:DVU1790 MutS2 family protein; Smr protein/MutS2 1276939 7284769 Ddes_1087 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Smr protein/MutS2 YP_002479671.1 1274486 R 525146 CDS YP_002479672.1 220904360 7284770 complement(1277214..1277750) 1 NC_011883.1 KEGG: dvl:Dvul_1367 GatB/YqeY domain-containing protein; GatB/YqeY domain-containing protein 1277750 7284770 Ddes_1088 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GatB/YqeY domain-containing protein YP_002479672.1 1277214 R 525146 CDS YP_002479673.1 220904361 7284771 complement(1277795..1277998) 1 NC_011883.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1277998 rpsU 7284771 rpsU Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S21 YP_002479673.1 1277795 R 525146 CDS YP_002479674.1 220904362 7284772 complement(1278342..1278614) 1 NC_011883.1 PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_1364 histone family protein DNA-binding protein; histone family protein DNA-binding protein 1278614 7284772 Ddes_1090 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histone family protein DNA-binding protein YP_002479674.1 1278342 R 525146 CDS YP_002479675.1 220904363 7284773 complement(1278725..1279564) 1 NC_011883.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1279564 ksgA 7284773 ksgA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dimethyladenosine transferase YP_002479675.1 1278725 R 525146 CDS YP_002479676.1 220904364 7284774 complement(1279571..1281622) 1 NC_011883.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1281622 7284774 Ddes_1092 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 elongation factor G YP_002479676.1 1279571 R 525146 CDS YP_002479677.1 220904365 7284775 complement(1281644..1282675) 1 NC_011883.1 KEGG: dvl:Dvul_1360 hypothetical protein; hypothetical protein 1282675 7284775 Ddes_1093 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479677.1 1281644 R 525146 CDS YP_002479678.1 220904366 7284776 complement(1282689..1284089) 1 NC_011883.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1284089 7284776 Ddes_1094 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 argininosuccinate lyase YP_002479678.1 1282689 R 525146 CDS YP_002479679.1 220904367 7284777 complement(1284324..1285529) 1 NC_011883.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1285529 7284777 Ddes_1095 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 argininosuccinate synthase YP_002479679.1 1284324 R 525146 CDS YP_002479680.1 220904368 7284778 1285737..1288979 1 NC_011883.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: dvl:Dvul_2806 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 1288979 7284778 Ddes_1096 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carbamoyl-phosphate synthase large subunit YP_002479680.1 1285737 D 525146 CDS YP_002479681.1 220904369 7284779 1288982..1290112 1 NC_011883.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1290112 7284779 Ddes_1097 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carbamoyl phosphate synthase small subunit YP_002479681.1 1288982 D 525146 CDS YP_002479682.1 220904370 7284780 1290224..1290655 1 NC_011883.1 KEGG: lip:LI0267 hypothetical protein; hypothetical protein 1290655 7284780 Ddes_1098 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479682.1 1290224 D 525146 CDS YP_002479683.1 220904371 7284781 1290699..1290941 1 NC_011883.1 KEGG: rme:Rmet_3472 hypothetical protein; hypothetical protein 1290941 7284781 Ddes_1099 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479683.1 1290699 D 525146 CDS YP_002479684.1 220904372 7284783 1291943..1292731 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: drm:Dred_2228 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1292731 7284783 Ddes_1101 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002479684.1 1291943 D 525146 CDS YP_002479685.1 220904373 7284784 complement(1292919..1293962) 1 NC_011883.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_0730 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1293962 7284784 Ddes_1102 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002479685.1 1292919 R 525146 CDS YP_002479686.1 220904374 7284785 complement(1293966..1295384) 1 NC_011883.1 KEGG: dvl:Dvul_0731 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 1295384 7284785 Ddes_1103 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate kinase YP_002479686.1 1293966 R 525146 CDS YP_002479687.1 220904375 7284786 1295773..1296219 1 NC_011883.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: dvl:Dvul_0732 cell division protein MraZ; MraZ protein 1296219 7284786 Ddes_1104 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MraZ protein YP_002479687.1 1295773 D 525146 CDS YP_002479688.1 220904376 7284787 1296229..1297212 1 NC_011883.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: dvl:Dvul_0733 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 1297212 mraW 7284787 mraW Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 S-adenosyl-methyltransferase MraW YP_002479688.1 1296229 D 525146 CDS YP_002479689.1 220904377 7284788 1297209..1297511 1 NC_011883.1 KEGG: dvl:Dvul_0734 hypothetical protein; hypothetical protein 1297511 7284788 Ddes_1106 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479689.1 1297209 D 525146 CDS YP_002479690.1 220904378 7284789 1297640..1299772 1 NC_011883.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: dvu:DVU2510 penicillin-binding protein; peptidoglycan glycosyltransferase 1299772 7284789 Ddes_1107 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidoglycan glycosyltransferase YP_002479690.1 1297640 D 525146 CDS YP_002479691.1 220904379 7284790 1300088..1301542 1 NC_011883.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dvu:DVU2509 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 1301542 7284790 Ddes_1108 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-N-acetylmuramyl tripeptide synthetase YP_002479691.1 1300088 D 525146 CDS YP_002479692.1 220904380 7284791 1301533..1302951 1 NC_011883.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dvl:Dvul_0737 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 1302951 7284791 Ddes_1109 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_002479692.1 1301533 D 525146 CDS YP_002479693.1 220904381 7284792 1303376..1304452 1 NC_011883.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1304452 mraY 7284792 mraY Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002479693.1 1303376 D 525146 CDS YP_002479694.1 220904382 7284793 1304464..1305768 1 NC_011883.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dvl:Dvul_0739 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1305768 7284793 Ddes_1111 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002479694.1 1304464 D 525146 CDS YP_002479695.1 220904383 7284794 1305765..1306946 1 NC_011883.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: dvl:Dvul_0740 cell division protein FtsW; cell division protein FtsW 1306946 7284794 Ddes_1112 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cell division protein FtsW YP_002479695.1 1305765 D 525146 CDS YP_002479696.1 220904384 7284795 1306925..1308001 1 NC_011883.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1308001 murG 7284795 murG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_002479696.1 1306925 D 525146 CDS YP_002479697.1 220904385 7284796 1308073..1309446 1 NC_011883.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1309446 murC 7284796 murC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-N-acetylmuramate--L-alanine ligase YP_002479697.1 1308073 D 525146 CDS YP_002479698.1 220904386 7284797 1309439..1310329 1 NC_011883.1 KEGG: dvu:DVU2502 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 1310329 7284797 Ddes_1115 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002479698.1 1309439 D 525146 CDS YP_002479699.1 220904387 7284798 1310314..1311201 1 NC_011883.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: dvl:Dvul_0744 polypeptide-transport-associated domain-containing protein; polypeptide-transport-associated domain-containing protein 1311201 7284798 Ddes_1116 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polypeptide-transport-associated domain-containing protein YP_002479699.1 1310314 D 525146 CDS YP_002479700.1 220904388 7284799 1311253..1312488 1 NC_011883.1 PFAM: cell division protein FtsA; KEGG: dvl:Dvul_0745 cell division protein FtsA; cell division protein FtsA 1312488 7284799 Ddes_1117 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cell division protein FtsA YP_002479700.1 1311253 D 525146 CDS YP_002479701.1 220904389 7284800 1312542..1313852 1 NC_011883.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1313852 7284800 Ddes_1118 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cell division protein FtsZ YP_002479701.1 1312542 D 525146 CDS YP_002479702.1 220904390 7284801 1314624..1315547 1 NC_011883.1 TIGRFAM: diaminopimelate dehydrogenase; KEGG: sth:STH1425 diaminopimelate dehydrogenase; diaminopimelate dehydrogenase 1315547 7284801 Ddes_1119 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diaminopimelate dehydrogenase YP_002479702.1 1314624 D 525146 CDS YP_002479703.1 220904391 7284802 complement(1315889..1316320) 1 NC_011883.1 PFAM: amino acid-binding ACT domain protein; KEGG: dvl:Dvul_1522 amino acid-binding ACT domain-containing protein; amino acid-binding ACT domain-containing protein 1316320 7284802 Ddes_1120 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid-binding ACT domain-containing protein YP_002479703.1 1315889 R 525146 CDS YP_002479704.1 220904392 7284803 complement(1316350..1316559) 1 NC_011883.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dvl:Dvul_1701 twin arginine-targeting protein translocase; twin-arginine translocation protein, TatA/E family subunit 1316559 7284803 Ddes_1121 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 twin-arginine translocation protein, TatA/E family subunit YP_002479704.1 1316350 R 525146 CDS YP_002479705.1 220904393 7284804 complement(1316757..1325111) 1 NC_011883.1 KEGG: plt:Plut_0676 VCBS; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; SMART: Cadherin; outer membrane adhesin-like protein 1325111 7284804 Ddes_1122 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane adhesin-like protein YP_002479705.1 1316757 R 525146 CDS YP_002479706.1 220904394 7284805 complement(1325376..1325525) 1 NC_011883.1 hypothetical protein 1325525 7284805 Ddes_1123 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479706.1 1325376 R 525146 CDS YP_002479707.1 220904395 7284807 1325985..1326374 1 NC_011883.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: ppw:PputW619_2862 CrcB protein; CrcB protein 1326374 7284807 Ddes_1125 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CrcB protein YP_002479707.1 1325985 D 525146 CDS YP_002479708.1 220904396 7284808 1326383..1326709 1 NC_011883.1 KEGG: rfr:Rfer_1947 hypothetical protein; hypothetical protein 1326709 7284808 Ddes_1126 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479708.1 1326383 D 525146 CDS YP_002479709.1 220904397 7284809 complement(1327076..1328161) 1 NC_011883.1 KEGG: lip:LI0254 hypothetical protein; hypothetical protein 1328161 7284809 Ddes_1127 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479709.1 1327076 R 525146 CDS YP_002479710.1 220904398 7284810 complement(1328395..1329282) 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_1705 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1329282 7284810 Ddes_1128 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dTDP-4-dehydrorhamnose reductase YP_002479710.1 1328395 R 525146 CDS YP_002479711.1 220904399 7284811 1329446..1330228 1 NC_011883.1 PFAM: anaerobic cobalt chelatase; KEGG: dvu:DVU1365 heme-binding protein, putative; anaerobic cobalt chelatase 1330228 7284811 Ddes_1129 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anaerobic cobalt chelatase YP_002479711.1 1329446 D 525146 CDS YP_002479712.1 220904400 7284812 1330237..1331076 1 NC_011883.1 hypothetical protein 1331076 7284812 Ddes_1130 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479712.1 1330237 D 525146 CDS YP_002479713.1 220904401 7284813 complement(1331360..1332106) 1 NC_011883.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: dvl:Dvul_0945 6-phosphogluconolactonase; 6-phosphogluconolactonase 1332106 7284813 Ddes_1131 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 6-phosphogluconolactonase YP_002479713.1 1331360 R 525146 CDS YP_002479714.1 220904402 7284814 complement(1332368..1333426) 1 NC_011883.1 KEGG: dvl:Dvul_1682 hypothetical protein; hypothetical protein 1333426 7284814 Ddes_1132 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479714.1 1332368 R 525146 CDS YP_002479715.1 220904403 7284815 complement(1333449..1334189) 1 NC_011883.1 KEGG: dvl:Dvul_0026 methyltransferase type 11; type 11 methyltransferase 1334189 7284815 Ddes_1133 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 11 methyltransferase YP_002479715.1 1333449 R 525146 CDS YP_002479716.1 220904404 7284816 complement(1334378..1334758) 1 NC_011883.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: drm:Dred_0614 putative endoribonuclease L-PSP; endoribonuclease L-PSP 1334758 7284816 Ddes_1134 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 endoribonuclease L-PSP YP_002479716.1 1334378 R 525146 CDS YP_002479717.1 220904405 7284817 complement(1334770..1335999) 1 NC_011883.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: dvu:DVU3297 tryptophan-specific transport protein; aromatic amino acid transporter 1335999 7284817 Ddes_1135 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aromatic amino acid transporter YP_002479717.1 1334770 R 525146 CDS YP_002479718.1 220904406 7284818 complement(1335999..1337069) 1 NC_011883.1 PFAM: Bile acid:sodium symporter; KEGG: bcl:ABC1222 sodium:bile acid symporter; bile acid:sodium symporter 1337069 7284818 Ddes_1136 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 bile acid:sodium symporter YP_002479718.1 1335999 R 525146 CDS YP_002479719.1 220904407 7284819 1337226..1338908 1 NC_011883.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1338908 7284819 Ddes_1137 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative ABC transporter ATP-binding protein YP_002479719.1 1337226 D 525146 CDS YP_002479720.1 220904408 7284820 1338965..1340575 1 NC_011883.1 KEGG: lip:LI0629 hypothetical protein; hypothetical protein 1340575 7284820 Ddes_1138 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479720.1 1338965 D 525146 CDS YP_002479721.1 220904409 7284821 1340677..1341330 1 NC_011883.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cdf:CD3605 putative phosphatase; HAD-superfamily hydrolase 1341330 7284821 Ddes_1139 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HAD-superfamily hydrolase YP_002479721.1 1340677 D 525146 CDS YP_002479722.1 220904410 7284822 complement(1341670..1342857) 1 NC_011883.1 KEGG: dvl:Dvul_2450 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1342857 7284822 Ddes_1140 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002479722.1 1341670 R 525146 CDS YP_002479723.1 220904411 7284823 complement(1342929..1344164) 1 NC_011883.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1344164 7284823 Ddes_1141 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate kinase YP_002479723.1 1342929 R 525146 CDS YP_002479724.1 220904412 7284824 complement(1344224..1344709) 1 NC_011883.1 PFAM: protein of unknown function UPF0079; KEGG: dvl:Dvul_1252 hypothetical protein; hypothetical protein 1344709 7284824 Ddes_1142 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479724.1 1344224 R 525146 CDS YP_002479725.1 220904413 7284825 complement(1344697..1346358) 1 NC_011883.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: lip:LI0750 hypothetical protein; carbohydrate kinase 1346358 7284825 Ddes_1143 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carbohydrate kinase YP_002479725.1 1344697 R 525146 CDS YP_002479726.1 220904414 7284826 complement(1346358..1346732) 1 NC_011883.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1346732 acpS 7284826 acpS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4'-phosphopantetheinyl transferase YP_002479726.1 1346358 R 525146 CDS YP_002479727.1 220904415 7284827 1346906..1348240 1 NC_011883.1 KEGG: dvl:Dvul_1257 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 1348240 7284827 Ddes_1145 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nucleotide sugar dehydrogenase YP_002479727.1 1346906 D 525146 CDS YP_002479728.1 220904416 7284828 1348605..1350173 1 NC_011883.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pvi:Cvib_1342 NifA subfamily transcriptional regulator; Fis family transcriptional regulator 1350173 7284828 Ddes_1146 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family transcriptional regulator YP_002479728.1 1348605 D 525146 CDS YP_002479729.1 220904417 7284829 1350932..1352137 1 NC_011883.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: dvu:DVU1231 ammonium transporter; ammonium transporter 1352137 7284829 Ddes_1147 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ammonium transporter YP_002479729.1 1350932 D 525146 CDS YP_002479730.1 220904418 7284830 1352156..1352494 1 NC_011883.1 PFAM: nitrogen regulatory protein P-II; KEGG: dar:Daro_1291 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1352494 7284830 Ddes_1148 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nitrogen regulatory protein P-II YP_002479730.1 1352156 D 525146 CDS YP_002479731.1 220904419 7284831 1352550..1354742 1 NC_011883.1 PFAM: glutamine synthetase catalytic region; KEGG: tte:TTE0821 glutamine synthase; glutamine synthetase 1354742 7284831 Ddes_1149 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamine synthetase YP_002479731.1 1352550 D 525146 CDS YP_002479732.1 220904420 7284832 1355089..1355952 1 NC_011883.1 PFAM: diaminopimelate epimerase; KEGG: cth:Cthe_3100 diaminopimelate epimerase; diaminopimelate epimerase 1355952 7284832 Ddes_1150 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diaminopimelate epimerase YP_002479732.1 1355089 D 525146 CDS YP_002479733.1 220904421 7284833 1355973..1357199 1 NC_011883.1 PFAM: aminotransferase class I and II; KEGG: emi:Emin_1014 aminotransferase class I and II; class I and II aminotransferase 1357199 7284833 Ddes_1151 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 class I and II aminotransferase YP_002479733.1 1355973 D 525146 CDS YP_002479734.1 220904422 7284834 complement(1357640..1358989) 1 NC_011883.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1358989 7284834 Ddes_1152 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamate dehydrogenase YP_002479734.1 1357640 R 525146 CDS YP_002479735.1 220904423 7284835 1359516..1360508 1 NC_011883.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: dvl:Dvul_1975 hypothetical protein; transglutaminase 1360508 7284835 Ddes_1153 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transglutaminase YP_002479735.1 1359516 D 525146 CDS YP_002479736.1 220904424 7284836 1360517..1362637 1 NC_011883.1 KEGG: dvl:Dvul_1974 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 1362637 7284836 Ddes_1154 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative PAS/PAC sensor protein YP_002479736.1 1360517 D 525146 CDS YP_002479737.1 220904425 7284837 1363153..1364259 1 NC_011883.1 KEGG: pca:Pcar_2598 putative glutamate synthase, large subunit (domain 1); putative glutamate synthase, large subunit (domain 1) 1364259 7284837 Ddes_1155 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative glutamate synthase, large subunit (domain 1) YP_002479737.1 1363153 D 525146 CDS YP_002479738.1 220904426 7284838 1364247..1365872 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; KEGG: ppd:Ppro_2160 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 1365872 7284838 Ddes_1156 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ferredoxin-dependent glutamate synthase YP_002479738.1 1364247 D 525146 CDS YP_002479739.1 220904427 7284839 1365895..1367040 1 NC_011883.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: ppd:Ppro_2159 glutamate synthase alpha subunit; glutamate synthase subunit alpha domain-containing protein 1367040 7284839 Ddes_1157 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamate synthase subunit alpha domain-containing protein YP_002479739.1 1365895 D 525146 CDS YP_002479740.1 220904428 7284840 1367223..1367732 1 NC_011883.1 PFAM: nitroreductase; KEGG: dvl:Dvul_0809 nitroreductase; nitroreductase 1367732 7284840 Ddes_1158 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nitroreductase YP_002479740.1 1367223 D 525146 CDS YP_002479741.1 220904429 7284841 complement(1367999..1368706) 1 NC_011883.1 PFAM: HhH-GPD family protein; KEGG: cbb:CLD_0120 methylated-DNA--protein-cysteine methyltransferase; HhH-GPD family protein 1368706 7284841 Ddes_1159 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HhH-GPD family protein YP_002479741.1 1367999 R 525146 CDS YP_002479742.1 220904430 7284842 complement(1368684..1369184) 1 NC_011883.1 KEGG: aoe:Clos_0936 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 1369184 7284842 Ddes_1160 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methylated-DNA--protein-cysteine methyltransferase YP_002479742.1 1368684 R 525146 CDS YP_002479743.1 220904431 7284843 complement(1369264..1369836) 1 NC_011883.1 PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; KEGG: cbb:CLD_0121 methylphosphotriester-DNA alkyltransferase; AraC family transcriptional regulator 1369836 7284843 Ddes_1161 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AraC family transcriptional regulator YP_002479743.1 1369264 R 525146 CDS YP_002479744.1 220904432 7284844 complement(1369907..1371346) 1 NC_011883.1 PFAM: regulatory protein GntR HTH; KEGG: dvl:Dvul_0077 GntR family transcriptional regulator; GntR family transcriptional regulator 1371346 7284844 Ddes_1162 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GntR family transcriptional regulator YP_002479744.1 1369907 R 525146 CDS YP_002479745.1 220904433 7284845 1371519..1371992 1 NC_011883.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dvl:Dvul_0078 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein 1371992 7284845 Ddes_1163 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyridoxamine 5'-phosphate oxidase-like protein YP_002479745.1 1371519 D 525146 CDS YP_002479746.1 220904434 7284846 1372407..1372727 1 NC_011883.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: dps:DP0971 hypothetical protein; cupin 1372727 7284846 Ddes_1164 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cupin YP_002479746.1 1372407 D 525146 CDS YP_002479747.1 220904435 7284847 1372803..1374278 1 NC_011883.1 PFAM: protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; Domain of unknown function DUF1858; KEGG: dvl:Dvul_0658 hemerythrin HHE cation binding domain-containing protein; hypothetical protein 1374278 7284847 Ddes_1165 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479747.1 1372803 D 525146 CDS YP_002479748.1 220904436 7284848 1374502..1374783 1 NC_011883.1 hypothetical protein 1374783 7284848 Ddes_1166 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479748.1 1374502 D 525146 CDS YP_002479749.1 220904437 7284849 complement(1374988..1375821) 1 NC_011883.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: dvl:Dvul_1399 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1375821 7284849 Ddes_1167 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phospholipid/glycerol acyltransferase YP_002479749.1 1374988 R 525146 CDS YP_002479750.1 220904438 7284850 complement(1375824..1377047) 1 NC_011883.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: dvl:Dvul_1401 recombination factor protein RarA; recombination factor protein RarA 1377047 7284850 Ddes_1168 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 recombination factor protein RarA YP_002479750.1 1375824 R 525146 CDS YP_002479751.1 220904439 7284851 complement(1377044..1377802) 1 NC_011883.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1377802 7284851 Ddes_1169 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 16S ribosomal RNA methyltransferase RsmE YP_002479751.1 1377044 R 525146 CDS YP_002479752.1 220904440 7284852 complement(1377799..1379517) 1 NC_011883.1 KEGG: dvl:Dvul_1404 hypothetical protein; hypothetical protein 1379517 7284852 Ddes_1170 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479752.1 1377799 R 525146 CDS YP_002479753.1 220904441 7284853 1379636..1380826 1 NC_011883.1 PFAM: GAF domain protein; KEGG: dvl:Dvul_1405 putative GAF sensor protein; putative GAF sensor protein 1380826 7284853 Ddes_1171 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative GAF sensor protein YP_002479753.1 1379636 D 525146 CDS YP_002479754.1 220904442 7284854 1380829..1381854 1 NC_011883.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: dvl:Dvul_1406 cell shape determining protein MreB; rod shape-determining protein MreB 1381854 7284854 Ddes_1172 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rod shape-determining protein MreB YP_002479754.1 1380829 D 525146 CDS YP_002479755.1 220904443 7284855 1382378..1383163 1 NC_011883.1 PFAM: inositol monophosphatase; KEGG: dvu:DVU1680 inositol-1-monophosphatase; inositol-phosphate phosphatase 1383163 7284855 Ddes_1173 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inositol-phosphate phosphatase YP_002479755.1 1382378 D 525146 CDS YP_002479756.1 220904444 7284856 complement(1383219..1383764) 1 NC_011883.1 KEGG: dvl:Dvul_1408 NUDIX hydrolase; NUDIX hydrolase 1383764 7284856 Ddes_1174 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NUDIX hydrolase YP_002479756.1 1383219 R 525146 CDS YP_002479757.1 220904445 7284857 1383796..1384206 1 NC_011883.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: dvl:Dvul_1409 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 1384206 7284857 Ddes_1175 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribosomal-protein-alanine acetyltransferase YP_002479757.1 1383796 D 525146 CDS YP_002479758.1 220904446 7284858 1384224..1384991 1 NC_011883.1 PFAM: triosephosphate isomerase; KEGG: dvl:Dvul_1410 triose-phosphate isomerase; Triose-phosphate isomerase 1384991 7284858 Ddes_1176 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Triose-phosphate isomerase YP_002479758.1 1384224 D 525146 CDS YP_002479759.1 220904447 7284859 1384991..1385428 1 NC_011883.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: dvl:Dvul_1411 preprotein translocase subunit SecG; preprotein translocase subunit SecG 1385428 secG 7284859 secG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 preprotein translocase subunit SecG YP_002479759.1 1384991 D 525146 CDS YP_002479760.1 220904448 7284860 1385507..1386601 1 NC_011883.1 PFAM: Smr protein/MutS2; KEGG: dvu:DVU2331 Smr family protein; Smr protein/MutS2 1386601 7284860 Ddes_1178 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Smr protein/MutS2 YP_002479760.1 1385507 D 525146 CDS YP_002479761.1 220904449 7284861 complement(1386629..1386967) 1 NC_011883.1 hypothetical protein 1386967 7284861 Ddes_1179 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479761.1 1386629 R 525146 CDS YP_002479762.1 220904450 7284862 complement(1387089..1387505) 1 NC_011883.1 KEGG: dvl:Dvul_0033 hypothetical protein; hypothetical protein 1387505 7284862 Ddes_1180 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479762.1 1387089 R 525146 CDS YP_002479763.1 220904451 7284863 complement(1387498..1390281) 1 NC_011883.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1390281 7284863 Ddes_1181 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA mismatch repair protein MutS YP_002479763.1 1387498 R 525146 CDS YP_002479764.1 220904452 7284864 complement(1390415..1390852) 1 NC_011883.1 KEGG: dvl:Dvul_1435 hypothetical protein; hypothetical protein 1390852 7284864 Ddes_1182 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479764.1 1390415 R 525146 CDS YP_002479765.1 220904453 7284865 complement(1391002..1391556) 1 NC_011883.1 PFAM: histidine triad (HIT) protein; KEGG: dvl:Dvul_1434 histidine triad (HIT) protein; histidine triad (HIT) protein 1391556 7284865 Ddes_1183 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine triad (HIT) protein YP_002479765.1 1391002 R 525146 CDS YP_002479766.1 220904454 7284866 complement(1391721..1394438) 1 NC_011883.1 PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase DHHA1; KEGG: dvl:Dvul_1433 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 1394438 7284866 Ddes_1184 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polynucleotide adenylyltransferase YP_002479766.1 1391721 R 525146 CDS YP_002479767.1 220904455 7284867 complement(1394435..1395367) 1 NC_011883.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dvl:Dvul_1432 tyrosine recombinase XerD; tyrosine recombinase XerD 1395367 7284867 Ddes_1185 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tyrosine recombinase XerD YP_002479767.1 1394435 R 525146 CDS YP_002479768.1 220904456 7284868 1395643..1396167 1 NC_011883.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: lip:LI0240 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1396167 7284868 Ddes_1186 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002479768.1 1395643 D 525146 CDS YP_002479769.1 220904457 7284869 1396278..1396571 1 NC_011883.1 KEGG: dvl:Dvul_1429 TRASH domain-containing protein; TRASH domain-containing protein 1396571 7284869 Ddes_1187 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TRASH domain-containing protein YP_002479769.1 1396278 D 525146 CDS YP_002479770.1 220904458 7284870 complement(1396981..1401315) 1 NC_011883.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA protein activase; KEGG: cth:Cthe_1329 putative CoA-substrate-specific enzyme activase; CoA-substrate-specific enzyme activase 1401315 7284870 Ddes_1188 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CoA-substrate-specific enzyme activase YP_002479770.1 1396981 R 525146 CDS YP_002479771.1 220904459 7284871 complement(1401550..1402875) 1 NC_011883.1 PFAM: Peptidase M23; KEGG: dvu:DVU1851 M24/M37 family peptidase; peptidase M23 1402875 7284871 Ddes_1189 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M23 YP_002479771.1 1401550 R 525146 CDS YP_002479772.1 220904460 7284872 1403072..1403713 1 NC_011883.1 KEGG: dvu:DVU1849 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1403713 7284872 Ddes_1190 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 protein-L-isoaspartate O-methyltransferase YP_002479772.1 1403072 D 525146 CDS YP_002479773.1 220904461 7284873 1403748..1404662 1 NC_011883.1 PFAM: Mrp protein; KEGG: dvl:Dvul_1315 hypothetical protein; Mrp protein 1404662 7284873 Ddes_1191 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Mrp protein YP_002479773.1 1403748 D 525146 CDS YP_002479774.1 220904462 7284874 1404891..1405451 1 NC_011883.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dvl:Dvul_1316 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1405451 7284874 Ddes_1192 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_002479774.1 1404891 D 525146 CDS YP_002479775.1 220904463 7284875 1405448..1405702 1 NC_011883.1 KEGG: dvl:Dvul_1317 hypothetical protein; hypothetical protein 1405702 7284875 Ddes_1193 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479775.1 1405448 D 525146 CDS YP_002479776.1 220904464 7284876 1405702..1406004 1 NC_011883.1 PFAM: Septum formation initiator; KEGG: dvl:Dvul_1318 septum formation initiator; septum formation initiator 1406004 7284876 Ddes_1194 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 septum formation initiator YP_002479776.1 1405702 D 525146 CDS YP_002479777.1 220904465 7284877 1406008..1407177 1 NC_011883.1 KEGG: dvl:Dvul_1319 hypothetical protein; hypothetical protein 1407177 7284877 Ddes_1195 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479777.1 1406008 D 525146 CDS YP_002479778.1 220904466 7284878 1407314..1408771 1 NC_011883.1 KEGG: dvl:Dvul_1320 putative lipoprotein; hypothetical protein 1408771 7284878 Ddes_1196 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479778.1 1407314 D 525146 CDS YP_002479779.1 220904467 7284879 1408854..1409867 1 NC_011883.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1409867 7284879 Ddes_1197 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 fructose-1,6-bisphosphatase YP_002479779.1 1408854 D 525146 CDS YP_002479780.1 220904468 7284880 1409937..1411022 1 NC_011883.1 KEGG: dvl:Dvul_1322 metalloendopeptidase glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 1411022 7284880 Ddes_1198 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycoprotease family metalloendopeptidase YP_002479780.1 1409937 D 525146 CDS YP_002479781.1 220904469 7284881 1411162..1411485 1 NC_011883.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: dvl:Dvul_1323 thioredoxin; thioredoxin 1411485 7284881 Ddes_1199 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thioredoxin YP_002479781.1 1411162 D 525146 CDS YP_002479782.1 220904470 7284882 1411482..1412408 1 NC_011883.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1324 thioredoxin reductase; thioredoxin reductase 1412408 7284882 Ddes_1200 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thioredoxin reductase YP_002479782.1 1411482 D 525146 CDS YP_002479783.1 220904471 7284883 1412401..1413132 1 NC_011883.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: dvl:Dvul_1325 putative lipoprotein; outer membrane assembly lipoprotein YfiO 1413132 7284883 Ddes_1201 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane assembly lipoprotein YfiO YP_002479783.1 1412401 D 525146 CDS YP_002479784.1 220904472 7284884 1413186..1414652 1 NC_011883.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: dvl:Dvul_1379 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1414652 7284884 Ddes_1202 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cation diffusion facilitator family transporter YP_002479784.1 1413186 D 525146 CDS YP_002479785.1 220904473 7284885 complement(1414666..1415271) 1 NC_011883.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1415271 engB 7284885 engB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribosome biogenesis GTP-binding protein YsxC YP_002479785.1 1414666 R 525146 CDS YP_002479786.1 220904474 7284886 1415460..1416017 1 NC_011883.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1416017 7284886 Ddes_1204 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 elongation factor P YP_002479786.1 1415460 D 525146 CDS YP_002479787.1 220904475 7284887 1416111..1418558 1 NC_011883.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: dvl:Dvul_1420 cell division FtsK/SpoIIIE; cell division protein FtsK 1418558 7284887 Ddes_1205 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cell division protein FtsK YP_002479787.1 1416111 D 525146 CDS YP_002479788.1 220904476 7284888 1418623..1419300 1 NC_011883.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: dvl:Dvul_1419 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 1419300 7284888 Ddes_1206 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane lipoprotein carrier protein LolA YP_002479788.1 1418623 D 525146 CDS YP_002479789.1 220904477 7284889 1419577..1421046 1 NC_011883.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1421046 rpsA 7284889 rpsA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S1 YP_002479789.1 1419577 D 525146 CDS YP_002479790.1 220904478 7284890 1421061..1422488 1 NC_011883.1 KEGG: dvl:Dvul_1611 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1422488 7284890 Ddes_1208 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 protease Do YP_002479790.1 1421061 D 525146 CDS YP_002479791.1 220904479 7284891 1422650..1424293 1 NC_011883.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1424293 7284891 Ddes_1209 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoglucomutase YP_002479791.1 1422650 D 525146 CDS YP_002479792.1 220904480 7284892 complement(1424438..1424866) 1 NC_011883.1 KEGG: sbm:Shew185_1701 hypothetical protein; hypothetical protein 1424866 7284892 Ddes_1210 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479792.1 1424438 R 525146 CDS YP_002479793.1 220904481 7284893 complement(1424866..1425597) 1 NC_011883.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dvu:DVU1669 ribosomal large subunit pseudouridine synthase B; pseudouridine synthase 1425597 7284893 Ddes_1211 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pseudouridine synthase YP_002479793.1 1424866 R 525146 CDS YP_002479794.1 220904482 7284894 1426206..1426829 1 NC_011883.1 KEGG: dvl:Dvul_0781 hypothetical protein; hypothetical protein 1426829 7284894 Ddes_1212 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479794.1 1426206 D 525146 CDS YP_002479795.1 220904483 7284895 1426847..1427374 1 NC_011883.1 KEGG: dvl:Dvul_0780 hypothetical protein; hypothetical protein 1427374 7284895 Ddes_1213 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479795.1 1426847 D 525146 CDS YP_002479796.1 220904484 7284896 1427385..1428419 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0779 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1428419 7284896 Ddes_1214 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002479796.1 1427385 D 525146 CDS YP_002479797.1 220904485 7284897 1428419..1429255 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lip:LI0250 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; binding-protein-dependent transport system inner membrane protein 1429255 7284897 Ddes_1215 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002479797.1 1428419 D 525146 CDS YP_002479798.1 220904486 7284898 1429322..1430917 1 NC_011883.1 PFAM: SMC domain protein; KEGG: dvl:Dvul_0777 SMC domain-containing protein; SMC domain-containing protein 1430917 7284898 Ddes_1216 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SMC domain-containing protein YP_002479798.1 1429322 D 525146 CDS YP_002479799.1 220904487 7284899 1431866..1432225 1 NC_011883.1 KEGG: aha:AHA_1235 hypothetical protein; hypothetical protein 1432225 7284899 Ddes_1217 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479799.1 1431866 D 525146 CDS YP_002479800.1 220904488 7284900 1432262..1432468 1 NC_011883.1 hypothetical protein 1432468 7284900 Ddes_1218 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479800.1 1432262 D 525146 CDS YP_002479801.1 220904489 7284901 complement(1433575..1435896) 1 NC_011883.1 KEGG: smt:Smal_3776 hypothetical protein; hypothetical protein 1435896 7284901 Ddes_1219 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479801.1 1433575 R 525146 CDS YP_002479802.1 220904490 7284903 1436431..1436817 1 NC_011883.1 hypothetical protein 1436817 7284903 Ddes_1221 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479802.1 1436431 D 525146 CDS YP_002479803.1 220904491 7284904 1436781..1438022 1 NC_011883.1 PFAM: plasmid recombination protein; KEGG: npu:Npun_R3345 plasmid recombination enzyme; plasmid recombination protein 1438022 7284904 Ddes_1222 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 plasmid recombination protein YP_002479803.1 1436781 D 525146 CDS YP_002479804.1 220904492 7284905 complement(1438034..1438297) 1 NC_011883.1 KEGG: oan:Oant_0679 hypothetical protein; hypothetical protein 1438297 7284905 Ddes_1223 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479804.1 1438034 R 525146 CDS YP_002479805.1 220904493 7284906 1438399..1438683 1 NC_011883.1 PFAM: helix-turn-helix domain protein; KEGG: mxa:MXAN_5872 DNA-binding protein; XRE family transcriptional regulator 1438683 7284906 Ddes_1224 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002479805.1 1438399 D 525146 CDS YP_002479806.1 220904494 7284907 complement(1438897..1440444) 1 NC_011883.1 PFAM: protein of unknown function DUF927; KEGG: esa:ESA_03018 hypothetical protein; hypothetical protein 1440444 7284907 Ddes_1225 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479806.1 1438897 R 525146 CDS YP_002479807.1 220904495 7284908 complement(1440503..1440712) 1 NC_011883.1 PFAM: regulatory protein MerR; regulatory protein MerR 1440712 7284908 Ddes_1226 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 regulatory protein MerR YP_002479807.1 1440503 R 525146 CDS YP_002479808.1 220904496 7284909 complement(1440699..1440935) 1 NC_011883.1 PFAM: Prophage CP4-57 regulatory; KEGG: dar:Daro_2566 prophage CP4-57 regulatory; phage transcriptional regulator AlpA 1440935 7284909 Ddes_1227 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phage transcriptional regulator AlpA YP_002479808.1 1440699 R 525146 CDS YP_002479809.1 220904497 7284910 complement(1441060..1441890) 1 NC_011883.1 hypothetical protein 1441890 7284910 Ddes_1228 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479809.1 1441060 R 525146 CDS YP_002479810.1 220904498 7284911 complement(1441887..1443095) 1 NC_011883.1 PFAM: integrase family protein; KEGG: dvu:DVU1527 phage integrase family site specific recombinase; integrase family protein 1443095 7284911 Ddes_1229 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase family protein YP_002479810.1 1441887 R 525146 CDS YP_002479811.1 220904499 7284913 complement(1443685..1444182) 1 NC_011883.1 KEGG: dvl:Dvul_1308 hypothetical protein; hypothetical protein 1444182 7284913 Ddes_1230 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479811.1 1443685 R 525146 CDS YP_002479812.1 220904500 7284914 complement(1444402..1444986) 1 NC_011883.1 KEGG: dvl:Dvul_1711 methyltransferase type 11; hypothetical protein 1444986 7284914 Ddes_1231 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479812.1 1444402 R 525146 CDS YP_002479813.1 220904501 7284915 complement(1444983..1445798) 1 NC_011883.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvl:Dvul_1712 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1445798 7284915 Ddes_1232 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002479813.1 1444983 R 525146 CDS YP_002479814.1 220904502 7284916 1446013..1449495 1 NC_011883.1 KEGG: dvl:Dvul_1715 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1449495 7284916 Ddes_1233 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA polymerase III subunit alpha YP_002479814.1 1446013 D 525146 CDS YP_002479815.1 220904503 7284917 1449509..1449664 1 NC_011883.1 hypothetical protein 1449664 7284917 Ddes_1234 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479815.1 1449509 D 525146 CDS YP_002479816.1 220904504 7284918 complement(1449629..1450711) 1 NC_011883.1 KEGG: sfu:Sfum_2254 teichoic acid biosynthesis related protein; teichoic acid biosynthesis-like protein 1450711 7284918 Ddes_1235 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 teichoic acid biosynthesis-like protein YP_002479816.1 1449629 R 525146 CDS YP_002479817.1 220904505 7284919 1451176..1451760 1 NC_011883.1 KEGG: lip:LI0584 hypothetical protein; hypothetical protein 1451760 7284919 Ddes_1236 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479817.1 1451176 D 525146 CDS YP_002479818.1 220904506 7284920 1452119..1452862 1 NC_011883.1 KEGG: dvl:Dvul_0523 cytochrome c family protein; cytochrome c family protein 1452862 7284920 Ddes_1237 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c family protein YP_002479818.1 1452119 D 525146 CDS YP_002479819.1 220904507 7284921 1452870..1454189 1 NC_011883.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: dvl:Dvul_0522 electron transport complex protein RnfC, putative; respiratory-chain NADH dehydrogenase domain 51 kDa subunit 1454189 7284921 Ddes_1238 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_002479819.1 1452870 D 525146 CDS YP_002479820.1 220904508 7284922 1454189..1455151 1 NC_011883.1 PFAM: NQR2 and RnfD family protein; KEGG: dvl:Dvul_0521 electron transport complex, RnfABCDGE type, D subunit; NQR2 and RnfD family protein 1455151 7284922 Ddes_1239 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NQR2 and RnfD family protein YP_002479820.1 1454189 D 525146 CDS YP_002479821.1 220904509 7284923 1455148..1455726 1 NC_011883.1 PFAM: FMN-binding domain protein; KEGG: dvl:Dvul_0520 FMN-binding domain-containing protein; FMN-binding domain-containing protein 1455726 7284923 Ddes_1240 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FMN-binding domain-containing protein YP_002479821.1 1455148 D 525146 CDS YP_002479822.1 220904510 7284924 1455753..1456430 1 NC_011883.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 1456430 7284924 Ddes_1241 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 electron transport complex protein RsxE YP_002479822.1 1455753 D 525146 CDS YP_002479823.1 220904511 7284925 1456569..1457141 1 NC_011883.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: dvl:Dvul_0518 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 1457141 7284925 Ddes_1242 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RnfABCDGE type electron transport complex subunit A YP_002479823.1 1456569 D 525146 CDS YP_002479824.1 220904512 7284926 1457247..1458158 1 NC_011883.1 involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate; ferredoxin 1458158 7284926 Ddes_1243 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ferredoxin YP_002479824.1 1457247 D 525146 CDS YP_002479825.1 220904513 7284927 1458170..1459213 1 NC_011883.1 PFAM: ApbE family lipoprotein; KEGG: dvu:DVU2798 ApbE family protein; ApbE family lipoprotein 1459213 7284927 Ddes_1244 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ApbE family lipoprotein YP_002479825.1 1458170 D 525146 CDS YP_002479826.1 220904514 7284928 1459668..1460978 1 NC_011883.1 PFAM: metallophosphoesterase; KEGG: lip:LI0585 DNA repair exonuclease; metallophosphoesterase 1460978 7284928 Ddes_1245 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metallophosphoesterase YP_002479826.1 1459668 D 525146 CDS YP_002479827.1 220904515 7284929 1460978..1465042 1 NC_011883.1 KEGG: lip:LI0586 hypothetical protein; hypothetical protein 1465042 7284929 Ddes_1246 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479827.1 1460978 D 525146 CDS YP_002479828.1 220904516 7284930 1465329..1465742 1 NC_011883.1 hypothetical protein 1465742 7284930 Ddes_1247 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479828.1 1465329 D 525146 CDS YP_002479829.1 220904517 7284931 1465892..1467520 1 NC_011883.1 KEGG: dvu:DVU0799 hypothetical protein; hypothetical protein 1467520 7284931 Ddes_1248 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479829.1 1465892 D 525146 CDS YP_002479830.1 220904518 7284933 1468434..1468901 1 NC_011883.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bba:Bd0085 cytidine/deoxycytidylate deaminase family protein; CMP/dCMP deaminase 1468901 7284933 Ddes_1249 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CMP/dCMP deaminase YP_002479830.1 1468434 D 525146 CDS YP_002479831.1 220904519 7284934 1469261..1470055 1 NC_011883.1 PFAM: protein of unknown function DUF34; KEGG: dvu:DVU1456 NIF3 family protein; hypothetical protein 1470055 7284934 Ddes_1250 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479831.1 1469261 D 525146 CDS YP_002479832.1 220904520 7284935 1470077..1470847 1 NC_011883.1 PFAM: protein of unknown function DUF164; KEGG: dvl:Dvul_1624 hypothetical protein; hypothetical protein 1470847 7284935 Ddes_1251 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479832.1 1470077 D 525146 CDS YP_002479833.1 220904521 7284937 1471325..1472587 1 NC_011883.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: dvl:Dvul_1625 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1472587 7284937 Ddes_1252 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002479833.1 1471325 D 525146 CDS YP_002479834.1 220904522 7284938 1472603..1474360 1 NC_011883.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dvl:Dvul_1626 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1474360 7284938 Ddes_1253 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AMP-dependent synthetase and ligase YP_002479834.1 1472603 D 525146 CDS YP_002479835.1 220904523 7284939 1474360..1474842 1 NC_011883.1 PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: dvl:Dvul_1627 D-tyrosyl-tRNA deacylase; D-tyrosyl-tRNA(Tyr) deacylase 1474842 7284939 Ddes_1254 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 D-tyrosyl-tRNA(Tyr) deacylase YP_002479835.1 1474360 D 525146 CDS YP_002479836.1 220904524 7284940 1474871..1475224 1 NC_011883.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dvl:Dvul_1630 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1475224 7284940 Ddes_1255 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anti-sigma-factor antagonist YP_002479836.1 1474871 D 525146 CDS YP_002479837.1 220904525 7284941 1475268..1476404 1 NC_011883.1 PFAM: protein of unknown function DUF342; KEGG: lip:LI0134 polymerase; hypothetical protein 1476404 7284941 Ddes_1256 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479837.1 1475268 D 525146 CDS YP_002479838.1 220904526 7284942 1476401..1478176 1 NC_011883.1 KEGG: dvu:DVU1447 CgeB family protein; CgeB family protein 1478176 7284942 Ddes_1257 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CgeB family protein YP_002479838.1 1476401 D 525146 CDS YP_002479839.1 220904527 7284943 1478173..1479588 1 NC_011883.1 PFAM: glycosyl transferase family 9; KEGG: dvu:DVU1446 heptosyltransferase family protein; glycosyl transferase family protein 1479588 7284943 Ddes_1258 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycosyl transferase family protein YP_002479839.1 1478173 D 525146 CDS YP_002479840.1 220904528 7284944 1479751..1481610 1 NC_011883.1 PFAM: flagellar hook-length control protein; KEGG: lip:LI0568 flagellar hook-length control protein; flagellar hook-length control protein 1481610 7284944 Ddes_1259 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar hook-length control protein YP_002479840.1 1479751 D 525146 CDS YP_002479841.1 220904529 7284945 1481636..1482490 1 NC_011883.1 PFAM: flagellar hook capping protein; KEGG: dvl:Dvul_1635 flagellar hook capping protein; flagellar hook capping protein 1482490 7284945 Ddes_1260 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar hook capping protein YP_002479841.1 1481636 D 525146 CDS YP_002479842.1 220904530 7284946 1482602..1485028 1 NC_011883.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0566 flagellar hook protein FlgE; hypothetical protein 1485028 7284946 Ddes_1261 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479842.1 1482602 D 525146 CDS YP_002479843.1 220904531 7284948 complement(1485609..1486397) 1 NC_011883.1 PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit; integrase catalytic subunit 1486397 7284948 Ddes_1262 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase catalytic subunit YP_002479843.1 1485609 R 525146 CDS YP_002479844.1 220904532 7284949 complement(1486454..1486720) 1 NC_011883.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA; transposase IS3/IS911 family protein 1486720 7284949 Ddes_1263 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transposase IS3/IS911 family protein YP_002479844.1 1486454 R 525146 CDS YP_002479845.1 220904533 7284956 1492843..1493283 1 NC_011883.1 PFAM: regulatory protein ArsR; KEGG: rru:Rru_A1450 ArsR family transcriptional regulator; ArsR family transcriptional regulator 1493283 7284956 Ddes_1264 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ArsR family transcriptional regulator YP_002479845.1 1492843 D 525146 CDS YP_002479846.1 220904534 7284957 1493313..1495403 1 NC_011883.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: lip:LI0598 cation-transporting ATPase, P-type; heavy metal translocating P-type ATPase 1495403 7284957 Ddes_1265 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heavy metal translocating P-type ATPase YP_002479846.1 1493313 D 525146 CDS YP_002479847.1 220904535 7284958 complement(1495493..1495870) 1 NC_011883.1 KEGG: cpy:Cphy_1511 hypothetical protein; hypothetical protein 1495870 7284958 Ddes_1266 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479847.1 1495493 R 525146 CDS YP_002479848.1 220904536 7284959 complement(1496118..1497101) 1 NC_011883.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1497101 ruvB 7284959 ruvB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Holliday junction DNA helicase RuvB YP_002479848.1 1496118 R 525146 CDS YP_002479849.1 220904537 7284960 complement(1497101..1497715) 1 NC_011883.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1497715 ruvA 7284960 ruvA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Holliday junction DNA helicase RuvA YP_002479849.1 1497101 R 525146 CDS YP_002479850.1 220904538 7284961 complement(1497826..1498860) 1 NC_011883.1 KEGG: dvl:Dvul_2372 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 1498860 7284961 Ddes_1269 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdenum cofactor biosynthesis protein A YP_002479850.1 1497826 R 525146 CDS YP_002479851.1 220904539 7284962 1498934..1499209 1 NC_011883.1 KEGG: dvl:Dvul_2377 hypothetical protein; hypothetical protein 1499209 7284962 Ddes_1270 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479851.1 1498934 D 525146 CDS YP_002479852.1 220904540 7284963 complement(1499254..1499850) 1 NC_011883.1 KEGG: dvl:Dvul_1879 hypothetical protein; hypothetical protein 1499850 7284963 Ddes_1271 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479852.1 1499254 R 525146 CDS YP_002479853.1 220904541 7284964 1500151..1500522 1 NC_011883.1 KEGG: dvl:Dvul_1881 hypothetical protein; hypothetical protein 1500522 7284964 Ddes_1272 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479853.1 1500151 D 525146 CDS YP_002479854.1 220904542 7284965 1500528..1501892 1 NC_011883.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1501892 7284965 Ddes_1273 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002479854.1 1500528 D 525146 CDS YP_002479855.1 220904543 7284966 1501886..1502500 1 NC_011883.1 PFAM: protein of unknown function DUF151; KEGG: dvl:Dvul_2005 hypothetical protein; hypothetical protein 1502500 7284966 Ddes_1274 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479855.1 1501886 D 525146 CDS YP_002479856.1 220904544 7284967 1502649..1503053 1 NC_011883.1 KEGG: dvl:Dvul_2011 hypothetical protein; hypothetical protein 1503053 7284967 Ddes_1275 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479856.1 1502649 D 525146 CDS YP_002479857.1 220904545 7284968 1503157..1504656 1 NC_011883.1 PFAM: response regulator receiver; KEGG: dvl:Dvul_2012 response regulator receiver protein; response regulator receiver protein 1504656 7284968 Ddes_1276 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002479857.1 1503157 D 525146 CDS YP_002479858.1 220904546 7284969 complement(1504713..1506155) 1 NC_011883.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ecm:EcSMS35_1534 multidrug resistance protein MdtK; MATE efflux family protein 1506155 7284969 Ddes_1277 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MATE efflux family protein YP_002479858.1 1504713 R 525146 CDS YP_002479859.1 220904547 7284970 complement(1506703..1507560) 1 NC_011883.1 PFAM: protein of unknown function DUF191; KEGG: dvu:DVU2755 hypothetical protein; hypothetical protein 1507560 7284970 Ddes_1278 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479859.1 1506703 R 525146 CDS YP_002479860.1 220904548 7284971 1507645..1508787 1 NC_011883.1 PFAM: Radical SAM domain protein; KEGG: dvl:Dvul_0551 radical SAM domain-containing protein; radical SAM protein 1508787 7284971 Ddes_1279 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002479860.1 1507645 D 525146 CDS YP_002479861.1 220904549 7284972 1508784..1509929 1 NC_011883.1 PFAM: Radical SAM domain protein; KEGG: dvu:DVU2757 radical SAM domain-containing protein; radical SAM protein 1509929 7284972 Ddes_1280 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002479861.1 1508784 D 525146 CDS YP_002479862.1 220904550 7284973 1510057..1510905 1 NC_011883.1 PFAM: protein of unknown function DUF178; KEGG: dvl:Dvul_0549 hypothetical protein; hypothetical protein 1510905 7284973 Ddes_1281 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479862.1 1510057 D 525146 CDS YP_002479863.1 220904551 7284974 complement(1511104..1512540) 1 NC_011883.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1512540 gatB 7284974 gatB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002479863.1 1511104 R 525146 CDS YP_002479864.1 220904552 7284975 complement(1512567..1514312) 1 NC_011883.1 KEGG: dvl:Dvul_1277 hypothetical protein; hypothetical protein 1514312 7284975 Ddes_1283 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479864.1 1512567 R 525146 CDS YP_002479865.1 220904553 7284976 complement(1514309..1515178) 1 NC_011883.1 PFAM: ATP-NAD/AcoX kinase; KEGG: dvl:Dvul_1276 NAD(+) kinase; ATP-NAD/AcoX kinase 1515178 7284976 Ddes_1284 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-NAD/AcoX kinase YP_002479865.1 1514309 R 525146 CDS YP_002479866.1 220904554 7284977 1515304..1515936 1 NC_011883.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1515936 7284977 Ddes_1285 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoheptose isomerase YP_002479866.1 1515304 D 525146 CDS YP_002479867.1 220904555 7284978 1515939..1516169 1 NC_011883.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dvl:Dvul_1274 FmdB family regulatory protein; FmdB family regulatory protein 1516169 7284978 Ddes_1286 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FmdB family regulatory protein YP_002479867.1 1515939 D 525146 CDS YP_002479868.1 220904556 7284979 1516181..1517113 1 NC_011883.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1517113 hemC 7284979 hemC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 porphobilinogen deaminase YP_002479868.1 1516181 D 525146 CDS YP_002479869.1 220904557 7284980 1517129..1519564 1 NC_011883.1 PFAM: peptidase S16 lon domain protein; KEGG: dvu:DVU1893 ATP-dependent protease, putative; peptidase S16 lon domain-containing protein 1519564 7284980 Ddes_1288 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase S16 lon domain-containing protein YP_002479869.1 1517129 D 525146 CDS YP_002479870.1 220904558 7284981 1519686..1520264 1 NC_011883.1 PFAM: regulatory protein TetR; KEGG: dvl:Dvul_1398 TetR family transcriptional regulator; TetR family transcriptional regulator 1520264 7284981 Ddes_1289 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TetR family transcriptional regulator YP_002479870.1 1519686 D 525146 CDS YP_002479871.1 220904559 7284982 1520498..1520617 1 NC_011883.1 hypothetical protein 1520617 7284982 Ddes_1290 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479871.1 1520498 D 525146 CDS YP_002479872.1 220904560 7284983 1520621..1522066 1 NC_011883.1 PFAM: Na+/solute symporter; KEGG: mem:Memar_1134 Na+/solute symporter; Na+/solute symporter 1522066 7284983 Ddes_1291 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Na+/solute symporter YP_002479872.1 1520621 D 525146 CDS YP_002479873.1 220904561 7284984 1522279..1523586 1 NC_011883.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: abu:Abu_1368 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 1523586 7284984 Ddes_1292 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 branched-chain amino acid transport system II carrier protein YP_002479873.1 1522279 D 525146 CDS YP_002479874.1 220904562 7284985 complement(1523887..1526205) 1 NC_011883.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: pca:Pcar_0543 membrane carboxypeptidase/penicillin-binding protein PbpC; penicillin-binding protein 1C 1526205 7284985 Ddes_1293 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 penicillin-binding protein 1C YP_002479874.1 1523887 R 525146 CDS YP_002479875.1 220904563 7284986 complement(1526538..1532231) 1 NC_011883.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: lpf:lpl1630 hypothetical protein; alpha-2-macroglobulin domain-containing protein 1532231 7284986 Ddes_1294 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alpha-2-macroglobulin domain-containing protein YP_002479875.1 1526538 R 525146 CDS YP_002479876.1 220904564 7284987 complement(1532278..1532838) 1 NC_011883.1 PFAM: protein of unknown function UPF0227; KEGG: abo:ABO_2495 hypothetical protein; hypothetical protein 1532838 7284987 Ddes_1295 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479876.1 1532278 R 525146 CDS YP_002479877.1 220904565 7284988 complement(1533445..1535220) 1 NC_011883.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 1535220 7284988 Ddes_1296 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formate--tetrahydrofolate ligase YP_002479877.1 1533445 R 525146 CDS YP_002479878.1 220904566 7284989 1535726..1536109 1 NC_011883.1 KEGG: rci:RRC450 hypothetical protein; hypothetical protein 1536109 7284989 Ddes_1297 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479878.1 1535726 D 525146 CDS YP_002479879.1 220904567 7284990 1536096..1536338 1 NC_011883.1 KEGG: dvl:Dvul_1811 hypothetical protein; hypothetical protein 1536338 7284990 Ddes_1298 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479879.1 1536096 D 525146 CDS YP_002479880.1 220904568 7284992 complement(1537611..1539737) 1 NC_011883.1 TIGRFAM: dethiobiotin synthase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: cha:CHAB381_0700 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1539737 7284992 Ddes_1300 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002479880.1 1537611 R 525146 CDS YP_002479881.1 220904569 7284993 complement(1539721..1540671) 1 NC_011883.1 KEGG: pth:PTH_0521 biotin synthase and related enzymes; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 1540671 7284993 Ddes_1301 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 biotin synthase YP_002479881.1 1539721 R 525146 CDS YP_002479882.1 220904570 7284994 complement(1541085..1541483) 1 NC_011883.1 PFAM: ROSMUCR transcriptional regulator; KEGG: dvl:Dvul_0717 MucR family transcriptional regulator; MucR family transcriptional regulator 1541483 7284994 Ddes_1302 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MucR family transcriptional regulator YP_002479882.1 1541085 R 525146 CDS YP_002479883.1 220904571 7284995 complement(1541820..1542563) 1 NC_011883.1 KEGG: lip:LI1049 hypothetical protein; hypothetical protein 1542563 7284995 Ddes_1303 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479883.1 1541820 R 525146 CDS YP_002479884.1 220904572 7284996 complement(1542714..1545662) 1 NC_011883.1 KEGG: lip:LI1093 outer membrane protein and related peptidoglycan-associated (LipO)proteins; hypothetical protein 1545662 7284996 Ddes_1304 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479884.1 1542714 R 525146 CDS YP_002479885.1 220904573 7284997 complement(1545968..1547107) 1 NC_011883.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_0471 sigma-54 dependent trancsriptional regulator; Fis family sigma-54 specific transcriptional regulator 1547107 7284997 Ddes_1305 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family sigma-54 specific transcriptional regulator YP_002479885.1 1545968 R 525146 CDS YP_002479886.1 220904574 7284998 1547214..1549916 1 NC_011883.1 KEGG: dvu:DVU1543 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; ATP-dependent helicase HrpB 1549916 7284998 Ddes_1306 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent helicase HrpB YP_002479886.1 1547214 D 525146 CDS YP_002479887.1 220904575 7284999 complement(1550113..1551111) 1 NC_011883.1 PFAM: alpha/beta hydrolase fold; KEGG: dvl:Dvul_1008 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1551111 7284999 Ddes_1307 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alpha/beta hydrolase fold protein YP_002479887.1 1550113 R 525146 CDS YP_002479888.1 220904576 7285000 1551245..1552525 1 NC_011883.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: dvl:Dvul_1007 hypothetical protein; hypothetical protein 1552525 7285000 Ddes_1308 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479888.1 1551245 D 525146 CDS YP_002479889.1 220904577 7285001 complement(1552898..1553101) 1 NC_011883.1 KEGG: dvu:DVU1567 hypothetical protein; hypothetical protein 1553101 7285001 Ddes_1309 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479889.1 1552898 R 525146 CDS YP_002479890.1 220904578 7285002 1553631..1554422 1 NC_011883.1 PFAM: 17 kDa surface antigen; KEGG: pae:PA0070 hypothetical protein; 17 kDa surface antigen 1554422 7285002 Ddes_1310 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 17 kDa surface antigen YP_002479890.1 1553631 D 525146 CDS YP_002479891.1 220904579 7285003 1554501..1555661 1 NC_011883.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rsq:Rsph17025_4050 hypothetical protein; peptidase S1 and S6 chymotrypsin/Hap 1555661 7285003 Ddes_1311 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase S1 and S6 chymotrypsin/Hap YP_002479891.1 1554501 D 525146 CDS YP_002479892.1 220904580 7285004 1555658..1556968 1 NC_011883.1 KEGG: rru:Rru_A3155 hypothetical protein; hypothetical protein 1556968 7285004 Ddes_1312 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479892.1 1555658 D 525146 CDS YP_002479893.1 220904581 7285005 1556971..1560081 1 NC_011883.1 KEGG: mlo:mll9171 virulence factor SrfB-like protein; virulence factor SrfB-like protein 1560081 7285005 Ddes_1313 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 virulence factor SrfB-like protein YP_002479893.1 1556971 D 525146 CDS YP_002479894.1 220904582 7285006 1560097..1562733 1 NC_011883.1 KEGG: mlo:mll9170 virulence factor SrfC-like protein; virulence factor SrfC-like protein 1562733 7285006 Ddes_1314 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 virulence factor SrfC-like protein YP_002479894.1 1560097 D 525146 CDS YP_002479895.1 220904583 7285007 1562737..1563801 1 NC_011883.1 KEGG: ent:Ent638_4237 hypothetical protein; hypothetical protein 1563801 7285007 Ddes_1315 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479895.1 1562737 D 525146 CDS YP_002479896.1 220904584 7285008 1563912..1565927 1 NC_011883.1 KEGG: pfl:PFL_6078 PpkA-related protein; PpkA-like protein 1565927 7285008 Ddes_1316 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PpkA-like protein YP_002479896.1 1563912 D 525146 CDS YP_002479897.1 220904585 7285009 1565951..1566763 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_6077 ABC transporter, ATP-binding protein; ABC transporter-like protein 1566763 7285009 Ddes_1317 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479897.1 1565951 D 525146 CDS YP_002479898.1 220904586 7285010 1566760..1568043 1 NC_011883.1 PFAM: protein of unknown function DUF214; KEGG: pmy:Pmen_2311 hypothetical protein; hypothetical protein 1568043 7285010 Ddes_1318 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479898.1 1566760 D 525146 CDS YP_002479899.1 220904587 7285011 1568033..1569742 1 NC_011883.1 PFAM: protein of unknown function DUF323; KEGG: pap:PSPA7_0142 hypothetical protein; hypothetical protein 1569742 7285011 Ddes_1319 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479899.1 1568033 D 525146 CDS YP_002479900.1 220904588 7285012 1569759..1570664 1 NC_011883.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: Os01g0742300; hypothetical protein ; K00020 3-hydroxyisobutyrate dehydrogenase; 2-hydroxy-3-oxopropionate reductase 1570664 7285012 Ddes_1320 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2-hydroxy-3-oxopropionate reductase YP_002479900.1 1569759 D 525146 CDS YP_002479901.1 220904589 7285013 1570769..1572808 1 NC_011883.1 PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; KEGG: dol:Dole_0847 alpha amylase all-beta; alpha amylase 1572808 7285013 Ddes_1321 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alpha amylase YP_002479901.1 1570769 D 525146 CDS YP_002479902.1 220904590 7285015 1573086..1573943 1 NC_011883.1 KEGG: rso:RS03668 putative hemolysin-type protein; transposase and inactivated derivatives-like protein 1573943 7285015 Ddes_1322 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transposase and inactivated derivatives-like protein YP_002479902.1 1573086 D 525146 CDS YP_002479903.1 220904591 7285016 1573983..1574834 1 NC_011883.1 KEGG: afw:Anae109_2925 hypothetical protein; hypothetical protein 1574834 7285016 Ddes_1323 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479903.1 1573983 D 525146 CDS YP_002479904.1 220904592 7285017 complement(1575849..1576385) 1 NC_011883.1 KEGG: rle:RL2802 hypothetical protein; hypothetical protein 1576385 7285017 Ddes_1324 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479904.1 1575849 R 525146 CDS YP_002479905.1 220904593 7285018 1576584..1576787 1 NC_011883.1 KEGG: mxa:MXAN_5238 hypothetical protein; hypothetical protein 1576787 7285018 Ddes_1325 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479905.1 1576584 D 525146 CDS YP_002479906.1 220904594 7285019 complement(1576850..1577041) 1 NC_011883.1 hypothetical protein 1577041 7285019 Ddes_1326 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479906.1 1576850 R 525146 CDS YP_002479907.1 220904595 7285020 1577233..1577691 1 NC_011883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppg:PputGB1_2958 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1577691 7285020 Ddes_1327 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002479907.1 1577233 D 525146 CDS YP_002479908.1 220904596 7285021 complement(1578019..1578762) 1 NC_011883.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP3738c hypothetical protein; type 12 methyltransferase 1578762 7285021 Ddes_1328 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 12 methyltransferase YP_002479908.1 1578019 R 525146 CDS YP_002479909.1 220904597 7285022 complement(1578864..1579598) 1 NC_011883.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: rso:RSc1804 hypothetical protein; 4'-phosphopantetheinyl transferase 1579598 7285022 Ddes_1329 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4'-phosphopantetheinyl transferase YP_002479909.1 1578864 R 525146 CDS YP_002479910.1 220904598 7285023 complement(1579585..1581300) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gvi:gll0321 HlyB/MsbA family ABC transporter; ABC transporter-like protein 1581300 7285023 Ddes_1330 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479910.1 1579585 R 525146 CDS YP_002479911.1 220904599 7285024 complement(1581297..1583087) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gvi:gll0322 HlyB/MsbA family ABC transporter; ABC transporter-like protein 1583087 7285024 Ddes_1331 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479911.1 1581297 R 525146 CDS YP_002479912.1 220904600 7285025 complement(1583087..1584412) 1 NC_011883.1 TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_3612 crotonyl-CoA reductase; crotonyl-CoA reductase 1584412 7285025 Ddes_1332 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 crotonyl-CoA reductase YP_002479912.1 1583087 R 525146 CDS YP_002479913.1 220904601 7285026 complement(1584424..1585167) 1 NC_011883.1 PFAM: Thioesterase; KEGG: hau:Haur_1885 oleoyl-(acyl-carrier-protein) hydrolase; Thioesterase 1585167 7285026 Ddes_1333 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Thioesterase YP_002479913.1 1584424 R 525146 CDS YP_002479914.1 220904602 7285027 complement(1585160..1593850) 1 NC_011883.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; Non-ribosomal peptide synthetase; KR domain protein; Beta-ketoacyl synthase; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; amino acid adenylation domain-containing protein 1593850 7285027 Ddes_1334 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid adenylation domain-containing protein YP_002479914.1 1585160 R 525146 CDS YP_002479915.1 220904603 7285028 complement(1593847..1597161) 1 NC_011883.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; amino acid adenylation domain-containing protein 1597161 7285028 Ddes_1335 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid adenylation domain-containing protein YP_002479915.1 1593847 R 525146 CDS YP_002479916.1 220904604 7285029 complement(1597158..1601555) 1 NC_011883.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: hau:Haur_3962 beta-ketoacyl synthase; beta-ketoacyl synthase 1601555 7285029 Ddes_1336 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-ketoacyl synthase YP_002479916.1 1597158 R 525146 CDS YP_002479917.1 220904605 7285030 complement(1601552..1605028) 1 NC_011883.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; amino acid adenylation domain-containing protein 1605028 7285030 Ddes_1337 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid adenylation domain-containing protein YP_002479917.1 1601552 R 525146 CDS YP_002479918.1 220904606 7285031 complement(1605018..1606688) 1 NC_011883.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bte:BTH_II1830 salicyl-AMP ligase; AMP-dependent synthetase and ligase 1606688 7285031 Ddes_1338 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AMP-dependent synthetase and ligase YP_002479918.1 1605018 R 525146 CDS YP_002479919.1 220904607 7285032 complement(1606838..1608058) 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A2336 major facilitator transporter; major facilitator superfamily protein 1608058 7285032 Ddes_1339 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002479919.1 1606838 R 525146 CDS YP_002479920.1 220904608 7285033 complement(1608075..1609211) 1 NC_011883.1 PFAM: ABC-2 type transporter; KEGG: pol:Bpro_3454 ABC-2; ABC-2 type transporter 1609211 7285033 Ddes_1340 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC-2 type transporter YP_002479920.1 1608075 R 525146 CDS YP_002479921.1 220904609 7285034 complement(1609211..1610164) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb0182 ABC-type multidrug transport system; ABC transporter-like protein 1610164 7285034 Ddes_1341 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479921.1 1609211 R 525146 CDS YP_002479922.1 220904610 7285035 complement(1610161..1611114) 1 NC_011883.1 KEGG: rce:RC1_2056 HlyD family secretion protein; HlyD family secretion protein 1611114 7285035 Ddes_1342 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HlyD family secretion protein YP_002479922.1 1610161 R 525146 CDS YP_002479923.1 220904611 7285036 complement(1611202..1613469) 1 NC_011883.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA1059 outer membrane protein, TonB-dependent receptor; TonB-dependent receptor 1613469 7285036 Ddes_1343 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TonB-dependent receptor YP_002479923.1 1611202 R 525146 CDS YP_002479924.1 220904612 7285037 complement(1613536..1613970) 1 NC_011883.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bpm:BURPS1710b_3453 biopolymer ExbD/TolR family transporter; biopolymer transport protein ExbD/TolR 1613970 7285037 Ddes_1344 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 biopolymer transport protein ExbD/TolR YP_002479924.1 1613536 R 525146 CDS YP_002479925.1 220904613 7285038 complement(1614892..1616295) 1 NC_011883.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: pfl:PFL_3488 salicylate biosynthesis isochorismate synthase; isochorismate synthase 1616295 7285038 Ddes_1345 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 isochorismate synthase YP_002479925.1 1614892 R 525146 CDS YP_002479926.1 220904614 7285039 complement(1616288..1616611) 1 NC_011883.1 TIGRFAM: chorismate mutase related enzymes; PFAM: Chorismate mutase; KEGG: bch:Bcen2424_5002 isochorismate-pyruvate lyase; chorismate mutase-like protein 1616611 7285039 Ddes_1346 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chorismate mutase-like protein YP_002479926.1 1616288 R 525146 CDS YP_002479927.1 220904615 7285041 complement(1617882..1619378) 1 NC_011883.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: dvl:Dvul_0252 glycerol kinase; glycerol kinase 1619378 7285041 Ddes_1347 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycerol kinase YP_002479927.1 1617882 R 525146 CDS YP_002479928.1 220904616 7285042 complement(1619606..1620526) 1 NC_011883.1 KEGG: sfu:Sfum_0004 hypothetical protein; hypothetical protein 1620526 7285042 Ddes_1348 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479928.1 1619606 R 525146 CDS YP_002479929.1 220904617 7285043 complement(1620760..1622589) 1 NC_011883.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ppw:PputW619_3221 citrate transporter; citrate transporter 1622589 7285043 Ddes_1349 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 citrate transporter YP_002479929.1 1620760 R 525146 CDS YP_002479930.1 220904618 7285044 complement(1623286..1624698) 1 NC_011883.1 PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0976 hypothetical protein; hypothetical protein 1624698 7285044 Ddes_1350 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479930.1 1623286 R 525146 CDS YP_002479931.1 220904619 7285045 complement(1624709..1625644) 1 NC_011883.1 KEGG: pca:Pcar_0934 hypothetical protein; hypothetical protein 1625644 7285045 Ddes_1351 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479931.1 1624709 R 525146 CDS YP_002479932.1 220904620 7285046 complement(1625721..1626587) 1 NC_011883.1 PFAM: regulatory protein MerR; KEGG: dps:DP1820 multidrug ABC transporter; MerR family transcriptional regulator 1626587 7285046 Ddes_1352 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MerR family transcriptional regulator YP_002479932.1 1625721 R 525146 CDS YP_002479933.1 220904621 7285047 complement(1627033..1627299) 1 NC_011883.1 KEGG: cbt:CLH_1372 hypothetical protein; hypothetical protein 1627299 7285047 Ddes_1353 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479933.1 1627033 R 525146 CDS YP_002479934.1 220904622 7285048 complement(1627306..1628403) 1 NC_011883.1 KEGG: dps:DP1818 hypothetical protein; hypothetical protein 1628403 7285048 Ddes_1354 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479934.1 1627306 R 525146 CDS YP_002479935.1 220904623 7285049 1629270..1629866 1 NC_011883.1 PFAM: microcompartments protein; KEGG: dps:DP1821 carbon dioxide concentrating mechanism protein (PduA related); microcompartments protein 1629866 7285049 Ddes_1355 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 microcompartments protein YP_002479935.1 1629270 D 525146 CDS YP_002479936.1 220904624 7285050 1629893..1631371 1 NC_011883.1 KEGG: cbt:CLH_1375 aldehyde-alcohol dehydrogenase 2; aldehyde-alcohol dehydrogenase 2 1631371 7285050 Ddes_1356 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aldehyde-alcohol dehydrogenase 2 YP_002479936.1 1629893 D 525146 CDS YP_002479937.1 220904625 7285051 1631431..1633977 1 NC_011883.1 PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: cpy:Cphy_1417 formate C-acetyltransferase; Formate C-acetyltransferase 1633977 7285051 Ddes_1357 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Formate C-acetyltransferase YP_002479937.1 1631431 D 525146 CDS YP_002479938.1 220904626 7285052 1634085..1635017 1 NC_011883.1 KEGG: cbk:CLL_A1454 benzylsuccinate synthase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein; glycyl-radical enzyme activating protein family 1635017 7285052 Ddes_1358 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycyl-radical enzyme activating protein family YP_002479938.1 1634085 D 525146 CDS YP_002479939.1 220904627 7285053 1635047..1635655 1 NC_011883.1 PFAM: microcompartments protein; KEGG: cpy:Cphy_1427 microcompartments protein; microcompartments protein 1635655 7285053 Ddes_1359 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 microcompartments protein YP_002479939.1 1635047 D 525146 CDS YP_002479940.1 220904628 7285054 1635659..1637236 1 NC_011883.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: amt:Amet_0259 acetaldehyde dehydrogenase (acetylating); acetaldehyde dehydrogenase 1637236 7285054 Ddes_1360 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetaldehyde dehydrogenase YP_002479940.1 1635659 D 525146 CDS YP_002479941.1 220904629 7285055 1637318..1637605 1 NC_011883.1 PFAM: microcompartments protein; KEGG: efa:EF1623 microcompartment protein; microcompartments protein 1637605 7285055 Ddes_1361 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 microcompartments protein YP_002479941.1 1637318 D 525146 CDS YP_002479942.1 220904630 7285056 1637679..1638362 1 NC_011883.1 PFAM: Propanediol utilization protein; KEGG: amt:Amet_0262 propanediol utilization protein; propanediol utilization protein 1638362 7285056 Ddes_1362 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 propanediol utilization protein YP_002479942.1 1637679 D 525146 CDS YP_002479943.1 220904631 7285057 1638365..1639186 1 NC_011883.1 TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: ctc:CTC02168 ethanolamine utilization protein EutJ; ethanolamine utilization protein EutJ family protein 1639186 7285057 Ddes_1363 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ethanolamine utilization protein EutJ family protein YP_002479943.1 1638365 D 525146 CDS YP_002479944.1 220904632 7285058 1639312..1639950 1 NC_011883.1 KEGG: ctc:CTC02167 putative ethanolamine utilization protein; hypothetical protein 1639950 7285058 Ddes_1364 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479944.1 1639312 D 525146 CDS YP_002479945.1 220904633 7285059 1639958..1640245 1 NC_011883.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: amt:Amet_0265 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 1640245 7285059 Ddes_1365 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_002479945.1 1639958 D 525146 CDS YP_002479946.1 220904634 7285060 1640249..1640797 1 NC_011883.1 PFAM: microcompartments protein; KEGG: dps:DP1825 propanediol utilization protein (PduT); microcompartments protein 1640797 7285060 Ddes_1366 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 microcompartments protein YP_002479946.1 1640249 D 525146 CDS YP_002479947.1 220904635 7285061 1640842..1641177 1 NC_011883.1 KEGG: dps:DP1826 hypothetical protein; hypothetical protein 1641177 7285061 Ddes_1367 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479947.1 1640842 D 525146 CDS YP_002479948.1 220904636 7285062 1641370..1641654 1 NC_011883.1 PFAM: microcompartments protein; KEGG: efa:EF1623 microcompartment protein; microcompartments protein 1641654 7285062 Ddes_1368 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 microcompartments protein YP_002479948.1 1641370 D 525146 CDS YP_002479949.1 220904637 7285063 1641739..1642845 1 NC_011883.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: amt:Amet_0269 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1642845 7285063 Ddes_1369 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 iron-containing alcohol dehydrogenase YP_002479949.1 1641739 D 525146 CDS YP_002479950.1 220904638 7285064 1643137..1644462 1 NC_011883.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cbt:CLH_1845 ethanolamine utilization Fe-S center protein eut; respiratory-chain NADH dehydrogenase domain 51 kDa subunit 1644462 7285064 Ddes_1370 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_002479950.1 1643137 D 525146 CDS YP_002479951.1 220904639 7285065 1644474..1645025 1 NC_011883.1 PFAM: microcompartments protein; KEGG: drm:Dred_1303 microcompartments protein; microcompartments protein 1645025 7285065 Ddes_1371 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 microcompartments protein YP_002479951.1 1644474 D 525146 CDS YP_002479952.1 220904640 7285066 1645072..1645419 1 NC_011883.1 PFAM: microcompartments protein; KEGG: dps:DP1827 propanediol utilization protein (PduU); microcompartments protein 1645419 7285066 Ddes_1372 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 microcompartments protein YP_002479952.1 1645072 D 525146 CDS YP_002479953.1 220904641 7285067 1645427..1645861 1 NC_011883.1 KEGG: drm:Dred_1291 ethanolamine utilization protein EutP; ethanolamine utilization protein EutP 1645861 7285067 Ddes_1373 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ethanolamine utilization protein EutP YP_002479953.1 1645427 D 525146 CDS YP_002479954.1 220904642 7285068 1646148..1646894 1 NC_011883.1 PFAM: protein of unknown function DUF421; KEGG: btr:Btr_0801 hypothetical protein; hypothetical protein 1646894 7285068 Ddes_1374 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479954.1 1646148 D 525146 CDS YP_002479955.1 220904643 7285069 1647015..1647266 1 NC_011883.1 PFAM: Transglycosylase-associated protein; KEGG: sdy:SDY_1695 hypothetical protein; transglycosylase-associated protein 1647266 7285069 Ddes_1375 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transglycosylase-associated protein YP_002479955.1 1647015 D 525146 CDS YP_002479956.1 220904644 7285070 1647476..1648309 1 NC_011883.1 KEGG: rfr:Rfer_1189 hypothetical protein; hypothetical protein 1648309 7285070 Ddes_1376 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479956.1 1647476 D 525146 CDS YP_002479957.1 220904645 7285072 1649052..1650122 1 NC_011883.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: lip:LI1137 chemotaxis response regulator; response regulator receiver modulated CheB methylesterase 1650122 7285072 Ddes_1377 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver modulated CheB methylesterase YP_002479957.1 1649052 D 525146 CDS YP_002479958.1 220904646 7285073 1650149..1652080 1 NC_011883.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: dvl:Dvul_1151 heat repeat-containing PBS lyase; HEAT domain containing protein 1652080 7285073 Ddes_1378 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HEAT domain containing protein YP_002479958.1 1650149 D 525146 CDS YP_002479959.1 220904647 7285074 1652083..1653744 1 NC_011883.1 PFAM: MCP methyltransferase CheR-type; KEGG: dvl:Dvul_1152 protein-glutamate O-methyltransferase; CheR-type MCP methyltransferase 1653744 7285074 Ddes_1379 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CheR-type MCP methyltransferase YP_002479959.1 1652083 D 525146 CDS YP_002479960.1 220904648 7285075 1653751..1654527 1 NC_011883.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_1153 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 1654527 7285075 Ddes_1380 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cobyrinic acid ac-diamide synthase YP_002479960.1 1653751 D 525146 CDS YP_002479961.1 220904649 7285076 1654521..1655258 1 NC_011883.1 PFAM: CheW domain protein; KEGG: dvl:Dvul_1154 putative CheW protein; CheW protein 1655258 7285076 Ddes_1381 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CheW protein YP_002479961.1 1654521 D 525146 CDS YP_002479962.1 220904650 7285077 1655521..1655889 1 NC_011883.1 PFAM: response regulator receiver; KEGG: dvl:Dvul_1155 response regulator receiver protein; response regulator receiver protein 1655889 7285077 Ddes_1382 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002479962.1 1655521 D 525146 CDS YP_002479963.1 220904651 7285078 1655954..1659049 1 NC_011883.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: dvl:Dvul_1156 CheA signal transduction histidine kinases; signal transduction histidine kinase CheA 1659049 7285078 Ddes_1383 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 signal transduction histidine kinase CheA YP_002479963.1 1655954 D 525146 CDS YP_002479964.1 220904652 7285079 1659255..1659464 1 NC_011883.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1659464 rpmB 7285079 rpmB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L28 YP_002479964.1 1659255 D 525146 CDS YP_002479965.1 220904653 7285080 1659522..1660499 1 NC_011883.1 PFAM: Rhomboid family protein; KEGG: dvl:Dvul_1844 rhomboid family protein; rhomboid family protein 1660499 7285080 Ddes_1385 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rhomboid family protein YP_002479965.1 1659522 D 525146 CDS YP_002479966.1 220904654 7285081 complement(1660976..1661164) 1 NC_011883.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dvl:Dvul_0286 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1661164 7285081 Ddes_1386 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rubredoxin-type Fe(Cys)4 protein YP_002479966.1 1660976 R 525146 CDS YP_002479967.1 220904655 7285082 complement(1661191..1661730) 1 NC_011883.1 PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: dvl:Dvul_1675 ferritin, Dps family protein; ferritin Dps family protein 1661730 7285082 Ddes_1387 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ferritin Dps family protein YP_002479967.1 1661191 R 525146 CDS YP_002479968.1 220904656 7285083 complement(1661984..1662394) 1 NC_011883.1 PFAM: ferric-uptake regulator; KEGG: dvl:Dvul_0284 ferric uptake regulator family protein; Fur family ferric uptake regulator 1662394 7285083 Ddes_1388 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fur family ferric uptake regulator YP_002479968.1 1661984 R 525146 CDS YP_002479969.1 220904657 7285084 1662475..1663296 1 NC_011883.1 hypothetical protein 1663296 7285084 Ddes_1389 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479969.1 1662475 D 525146 CDS YP_002479970.1 220904658 7285085 complement(1663537..1664568) 1 NC_011883.1 PFAM: Glucokinase; KEGG: dvu:DVU1035 glucokinase, putative; glucokinase 1664568 7285085 Ddes_1390 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glucokinase YP_002479970.1 1663537 R 525146 CDS YP_002479971.1 220904659 7285086 complement(1664579..1666045) 1 NC_011883.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: pla:Plav_1895 RfaE bifunctional protein; rfaE bifunctional protein 1666045 7285086 Ddes_1391 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rfaE bifunctional protein YP_002479971.1 1664579 R 525146 CDS YP_002479972.1 220904660 7285087 complement(1666088..1668052) 1 NC_011883.1 PFAM: glycosyl transferase group 1; ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2233 ABC transporter related; ABC transporter-like protein 1668052 7285087 Ddes_1392 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002479972.1 1666088 R 525146 CDS YP_002479973.1 220904661 7285088 complement(1668120..1669310) 1 NC_011883.1 PFAM: protein of unknown function DUF214; KEGG: sfu:Sfum_2234 protein of unknown function DUF214; hypothetical protein 1669310 7285088 Ddes_1393 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479973.1 1668120 R 525146 CDS YP_002479974.1 220904662 7285089 complement(1669575..1670753) 1 NC_011883.1 KEGG: sfu:Sfum_2255 glycosyltransferases probably involved in cell wall biogenesis-like; cell wall biogenesis glycosyltransferase-like protein 1670753 7285089 Ddes_1394 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cell wall biogenesis glycosyltransferase-like protein YP_002479974.1 1669575 R 525146 CDS YP_002479975.1 220904663 7285090 complement(1670824..1671501) 1 NC_011883.1 KEGG: sfu:Sfum_2228 hypothetical protein; hypothetical protein 1671501 7285090 Ddes_1395 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479975.1 1670824 R 525146 CDS YP_002479976.1 220904664 7285091 complement(1671664..1672986) 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2253 glycosyl transferase, group 1; group 1 glycosyl transferase 1672986 7285091 Ddes_1396 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002479976.1 1671664 R 525146 CDS YP_002479977.1 220904665 7285092 1673211..1674224 1 NC_011883.1 KEGG: sfu:Sfum_2250 hypothetical protein; hypothetical protein 1674224 7285092 Ddes_1397 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479977.1 1673211 D 525146 CDS YP_002479978.1 220904666 7285093 1674224..1675009 1 NC_011883.1 KEGG: pst:PSPTO_3879 hypothetical protein; hypothetical protein 1675009 7285093 Ddes_1398 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479978.1 1674224 D 525146 CDS YP_002479979.1 220904667 7285094 1675132..1676034 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvl:Dvul_1985 hypothetical protein; hypothetical protein 1676034 7285094 Ddes_1399 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479979.1 1675132 D 525146 CDS YP_002479980.1 220904668 7285095 complement(1676047..1677102) 1 NC_011883.1 KEGG: lip:LI0105 hypothetical protein; hypothetical protein 1677102 7285095 Ddes_1400 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479980.1 1676047 R 525146 CDS YP_002479981.1 220904669 7285096 1677162..1678682 1 NC_011883.1 KEGG: dvu:DVU0897 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 1678682 7285096 Ddes_1401 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MiaB family RNA modification protein YP_002479981.1 1677162 D 525146 CDS YP_002479982.1 220904670 7285097 complement(1679002..1679583) 1 NC_011883.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: dvl:Dvul_1994 PfpI family intracellular peptidase; PfpI family intracellular protease 1679583 7285097 Ddes_1402 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PfpI family intracellular protease YP_002479982.1 1679002 R 525146 CDS YP_002479983.1 220904671 7285098 1679802..1680059 1 NC_011883.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dvl:Dvul_1995 FmdB family regulatory protein; FmdB family regulatory protein 1680059 7285098 Ddes_1403 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FmdB family regulatory protein YP_002479983.1 1679802 D 525146 CDS YP_002479984.1 220904672 7285099 1680217..1681098 1 NC_011883.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: dvl:Dvul_2086 hypothetical protein; hypothetical protein 1681098 7285099 Ddes_1404 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479984.1 1680217 D 525146 CDS YP_002479985.1 220904673 7285100 1681102..1681356 1 NC_011883.1 PFAM: protein of unknown function DUF370; KEGG: dvl:Dvul_2085 hypothetical protein; hypothetical protein 1681356 7285100 Ddes_1405 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479985.1 1681102 D 525146 CDS YP_002479986.1 220904674 7285101 1681356..1681964 1 NC_011883.1 KEGG: lip:LI0310 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase 1681964 7285101 Ddes_1406 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 guanylate kinase YP_002479986.1 1681356 D 525146 CDS YP_002479987.1 220904675 7285102 1682039..1682746 1 NC_011883.1 KEGG: dvl:Dvul_2083 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 1682746 7285102 Ddes_1407 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 orotidine 5'-phosphate decarboxylase YP_002479987.1 1682039 D 525146 CDS YP_002479988.1 220904676 7285103 1682762..1683619 1 NC_011883.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_2082 TPR repeat-containing protein; hypothetical protein 1683619 7285103 Ddes_1408 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479988.1 1682762 D 525146 CDS YP_002479989.1 220904677 7285104 1683643..1685379 1 NC_011883.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: dvl:Dvul_2080 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 1685379 7285104 Ddes_1409 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 single-stranded-DNA-specific exonuclease RecJ YP_002479989.1 1683643 D 525146 CDS YP_002479990.1 220904678 7285105 1685605..1686798 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cdf:CD2887 putative signaling protein; diguanylate cyclase 1686798 7285105 Ddes_1410 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase YP_002479990.1 1685605 D 525146 CDS YP_002479991.1 220904679 7285106 complement(1686882..1687727) 1 NC_011883.1 PFAM: cyclic nucleotide-binding; KEGG: dsy:DSY3652 hypothetical protein; cyclic nucleotide-binding protein 1687727 7285106 Ddes_1411 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cyclic nucleotide-binding protein YP_002479991.1 1686882 R 525146 CDS YP_002479992.1 220904680 7285107 1688027..1689475 1 NC_011883.1 KEGG: drm:Dred_0607 hypothetical protein; hypothetical protein 1689475 7285107 Ddes_1412 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479992.1 1688027 D 525146 CDS YP_002479993.1 220904681 7285108 complement(1689920..1691452) 1 NC_011883.1 KEGG: lip:LI0461 hypothetical protein; hypothetical protein 1691452 7285108 Ddes_1413 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479993.1 1689920 R 525146 CDS YP_002479994.1 220904682 7285109 1691787..1693121 1 NC_011883.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0285 major facilitator superfamily sugar transporter; major facilitator superfamily protein 1693121 7285109 Ddes_1414 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002479994.1 1691787 D 525146 CDS YP_002479995.1 220904683 7285110 1693222..1694046 1 NC_011883.1 KEGG: drm:Dred_0606 hypothetical protein; hypothetical protein 1694046 7285110 Ddes_1415 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479995.1 1693222 D 525146 CDS YP_002479996.1 220904684 7285111 1694056..1695441 1 NC_011883.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: dvl:Dvul_1653 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1695441 7285111 Ddes_1416 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002479996.1 1694056 D 525146 CDS YP_002479997.1 220904685 7285112 1695465..1695845 1 NC_011883.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: esa:ESA_00425 glycine cleavage system protein H; glycine cleavage system H protein 1695845 7285112 Ddes_1417 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine cleavage system H protein YP_002479997.1 1695465 D 525146 CDS YP_002479998.1 220904686 7285114 complement(1696571..1697368) 1 NC_011883.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1697368 7285114 Ddes_1418 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 undecaprenyl pyrophosphate phosphatase YP_002479998.1 1696571 R 525146 CDS YP_002479999.1 220904687 7285115 1697507..1697701 1 NC_011883.1 KEGG: dvl:Dvul_1426 hypothetical protein; hypothetical protein 1697701 7285115 Ddes_1419 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002479999.1 1697507 D 525146 CDS YP_002480000.1 220904688 7285116 complement(1698025..1700037) 1 NC_011883.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1700037 7285116 Ddes_1420 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methionyl-tRNA synthetase YP_002480000.1 1698025 R 525146 CDS YP_002480001.1 220904689 7285117 complement(1700071..1701159) 1 NC_011883.1 PFAM: PSP1 domain protein; KEGG: dvl:Dvul_1170 PSP1 domain-containing protein; PSP1 domain-containing protein 1701159 7285117 Ddes_1421 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PSP1 domain-containing protein YP_002480001.1 1700071 R 525146 CDS YP_002480002.1 220904690 7285118 1701448..1702005 1 NC_011883.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvl:Dvul_1169 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1702005 7285118 Ddes_1422 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002480002.1 1701448 D 525146 CDS YP_002480003.1 220904691 7285119 1702022..1703329 1 NC_011883.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 1703329 7285119 Ddes_1423 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_002480003.1 1702022 D 525146 CDS YP_002480004.1 220904692 7285120 complement(1703544..1704323) 1 NC_011883.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1704323 7285120 Ddes_1424 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydrodipicolinate reductase YP_002480004.1 1703544 R 525146 CDS YP_002480005.1 220904693 7285121 complement(1704347..1706485) 1 NC_011883.1 KEGG: dvu:DVU1608 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; NAD-dependent DNA ligase 1706485 7285121 Ddes_1425 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent DNA ligase YP_002480005.1 1704347 R 525146 CDS YP_002480006.1 220904694 7285122 complement(1706598..1708634) 1 NC_011883.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1708634 7285122 Ddes_1426 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 excinuclease ABC subunit B YP_002480006.1 1706598 R 525146 CDS YP_002480007.1 220904695 7285123 1708692..1709186 1 NC_011883.1 KEGG: dvl:Dvul_1530 hypothetical protein; hypothetical protein 1709186 7285123 Ddes_1427 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480007.1 1708692 D 525146 CDS YP_002480008.1 220904696 7285124 complement(1709147..1709941) 1 NC_011883.1 KEGG: dvl:Dvul_1531 leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 1709941 7285124 Ddes_1428 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 leucyl/phenylalanyl-tRNA/protein transferase YP_002480008.1 1709147 R 525146 CDS YP_002480009.1 220904697 7285125 complement(1710238..1712736) 1 NC_011883.1 KEGG: dvl:Dvul_1532 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; ATP-dependent Clp protease ATP-binding subunit clpA; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1712736 7285125 Ddes_1429 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent Clp protease ATP-binding protein ClpA YP_002480009.1 1710238 R 525146 CDS YP_002480010.1 220904698 7285126 complement(1712745..1713065) 1 NC_011883.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: lip:LI0617 hypothetical protein; ATP-dependent Clp protease adaptor protein ClpS 1713065 7285126 Ddes_1430 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent Clp protease adaptor protein ClpS YP_002480010.1 1712745 R 525146 CDS YP_002480011.1 220904699 7285127 complement(1713089..1713730) 1 NC_011883.1 PFAM: adenylate cyclase; KEGG: dvl:Dvul_1534 adenylate cyclase; adenylate cyclase 1713730 7285127 Ddes_1431 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylate cyclase YP_002480011.1 1713089 R 525146 CDS YP_002480012.1 220904700 7285128 complement(1713730..1715106) 1 NC_011883.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1715106 7285128 Ddes_1432 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA repair protein RadA YP_002480012.1 1713730 R 525146 CDS YP_002480013.1 220904701 7285129 complement(1715454..1716344) 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azo:azo2604 hypothetical protein; hypothetical protein 1716344 7285129 Ddes_1433 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480013.1 1715454 R 525146 CDS YP_002480014.1 220904702 7285130 complement(1716341..1717741) 1 NC_011883.1 KEGG: dvu:DVU2827 sigma-54 dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; Fis family PAS modulated sigma54 specific transcriptional regulator 1717741 7285130 Ddes_1434 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family PAS modulated sigma54 specific transcriptional regulator YP_002480014.1 1716341 R 525146 CDS YP_002480015.1 220904703 7285131 complement(1717769..1718707) 1 NC_011883.1 KEGG: dvl:Dvul_0490 glycyl-radical activating family protein; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 1718707 7285131 Ddes_1435 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycyl-radical enzyme activating protein family YP_002480015.1 1717769 R 525146 CDS YP_002480016.1 220904704 7285132 complement(1718817..1721312) 1 NC_011883.1 PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: dvl:Dvul_0491 formate C-acetyltransferase; Formate C-acetyltransferase 1721312 7285132 Ddes_1436 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Formate C-acetyltransferase YP_002480016.1 1718817 R 525146 CDS YP_002480017.1 220904705 7285133 1722037..1722870 1 NC_011883.1 PFAM: amidohydrolase 2; KEGG: dvu:DVU2820 amidohydrolase family protein; amidohydrolase 2 1722870 7285133 Ddes_1437 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amidohydrolase 2 YP_002480017.1 1722037 D 525146 CDS YP_002480018.1 220904706 7285134 1722882..1724258 1 NC_011883.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_C6090 major facilitator transporter; major facilitator superfamily protein 1724258 7285134 Ddes_1438 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002480018.1 1722882 D 525146 CDS YP_002480019.1 220904707 7285135 complement(1724746..1725465) 1 NC_011883.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: dvl:Dvul_1544 zinc finger-domain-containing protein; hypothetical protein 1725465 7285135 Ddes_1439 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480019.1 1724746 R 525146 CDS YP_002480020.1 220904708 7285136 complement(1725513..1726064) 1 NC_011883.1 KEGG: dvl:Dvul_1545 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1726064 7285136 Ddes_1440 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypoxanthine phosphoribosyltransferase YP_002480020.1 1725513 R 525146 CDS YP_002480021.1 220904709 7285137 complement(1726285..1726761) 1 NC_011883.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aba:Acid345_1843 thioredoxin-like; redoxin domain-containing protein 1726761 7285137 Ddes_1441 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 redoxin domain-containing protein YP_002480021.1 1726285 R 525146 CDS YP_002480022.1 220904710 7285138 complement(1726873..1729281) 1 NC_011883.1 PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: dvl:Dvul_1548 homocysteine S-methyltransferase; homocysteine S-methyltransferase 1729281 7285138 Ddes_1442 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 homocysteine S-methyltransferase YP_002480022.1 1726873 R 525146 CDS YP_002480023.1 220904711 7285139 1729654..1730955 1 NC_011883.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: dvl:Dvul_1549 sigma-70 region 2 domain-containing protein; putative RNA polymerase sigma 70 family subunit 1730955 7285139 Ddes_1443 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative RNA polymerase sigma 70 family subunit YP_002480023.1 1729654 D 525146 CDS YP_002480024.1 220904712 7285140 1731092..1732837 1 NC_011883.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_1550 TPR repeat-containing protein; hypothetical protein 1732837 7285140 Ddes_1444 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480024.1 1731092 D 525146 CDS YP_002480025.1 220904713 7285141 1732834..1733628 1 NC_011883.1 KEGG: dvu:DVU1582 hypothetical protein; hypothetical protein 1733628 7285141 Ddes_1445 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480025.1 1732834 D 525146 CDS YP_002480026.1 220904714 7285142 1733906..1734340 1 NC_011883.1 KEGG: dvl:Dvul_1553 RpiB/LacA/LacB family sugar-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; ribose 5-phosphate isomerase B 1734340 7285142 Ddes_1446 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribose 5-phosphate isomerase B YP_002480026.1 1733906 D 525146 CDS YP_002480027.1 220904715 7285143 1734350..1735801 1 NC_011883.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1735801 cysS 7285143 cysS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cysteinyl-tRNA synthetase YP_002480027.1 1734350 D 525146 CDS YP_002480028.1 220904716 7285144 1735831..1737240 1 NC_011883.1 PFAM: TPR repeat-containing protein; peptidase M48 Ste24p; SMART: Tetratricopeptide domain protein; KEGG: dvu:DVU1578 TPR domain-containing protein; peptidase M48 Ste24p 1737240 7285144 Ddes_1448 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M48 Ste24p YP_002480028.1 1735831 D 525146 CDS YP_002480029.1 220904717 7285145 1737240..1737773 1 NC_011883.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1737773 7285145 Ddes_1449 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent protease peptidase subunit YP_002480029.1 1737240 D 525146 CDS YP_002480030.1 220904718 7285146 1738034..1738921 1 NC_011883.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1738921 7285146 Ddes_1450 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002480030.1 1738034 D 525146 CDS YP_002480031.1 220904719 7285148 1739188..1740135 1 NC_011883.1 KEGG: dvl:Dvul_1558 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1740135 7285148 Ddes_1451 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribose-phosphate pyrophosphokinase YP_002480031.1 1739188 D 525146 CDS YP_002480032.1 220904720 7285149 1740403..1741002 1 NC_011883.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1741002 7285149 Ddes_1452 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L25/general stress protein Ctc YP_002480032.1 1740403 D 525146 CDS YP_002480033.1 220904721 7285150 1741262..1742164 1 NC_011883.1 PFAM: alpha/beta hydrolase fold; KEGG: nca:Noca_1054 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1742164 7285150 Ddes_1453 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 alpha/beta hydrolase fold protein YP_002480033.1 1741262 D 525146 CDS YP_002480034.1 220904722 7285151 1742154..1742843 1 NC_011883.1 PFAM: peptidyl-tRNA hydrolase; KEGG: dvl:Dvul_1560 peptidyl-tRNA hydrolase; Aminoacyl-tRNA hydrolase 1742843 7285151 Ddes_1454 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Aminoacyl-tRNA hydrolase YP_002480034.1 1742154 D 525146 CDS YP_002480035.1 220904723 7285152 1743230..1743745 1 NC_011883.1 PFAM: transcription factor CarD; KEGG: dvl:Dvul_1561 CarD family transcriptional regulator; CarD family transcriptional regulator 1743745 7285152 Ddes_1455 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CarD family transcriptional regulator YP_002480035.1 1743230 D 525146 CDS YP_002480036.1 220904724 7285153 1744049..1745344 1 NC_011883.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1745344 rho 7285153 rho Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transcription termination factor Rho YP_002480036.1 1744049 D 525146 CDS YP_002480037.1 220904725 7285154 1745559..1745870 1 NC_011883.1 PFAM: cytochrome c class I; KEGG: pha:PSHAa0285 cytochrome c4; cytochrome c class I 1745870 7285154 Ddes_1457 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c class I YP_002480037.1 1745559 D 525146 CDS YP_002480038.1 220904726 7285155 complement(1745959..1746708) 1 NC_011883.1 PFAM: Endonuclease I; KEGG: lip:LI0181 endonuclease I; Deoxyribonuclease I 1746708 7285155 Ddes_1458 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Deoxyribonuclease I YP_002480038.1 1745959 R 525146 CDS YP_002480039.1 220904727 7285157 1747561..1748250 1 NC_011883.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvl:Dvul_0282 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1748250 7285157 Ddes_1459 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MotA/TolQ/ExbB proton channel YP_002480039.1 1747561 D 525146 CDS YP_002480040.1 220904728 7285158 1748253..1748729 1 NC_011883.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvl:Dvul_0281 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1748729 7285158 Ddes_1460 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 biopolymer transport protein ExbD/TolR YP_002480040.1 1748253 D 525146 CDS YP_002480041.1 220904729 7285159 1748726..1749403 1 NC_011883.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: spe:Spro_2682 transport protein TonB; TonB family protein 1749403 7285159 Ddes_1461 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TonB family protein YP_002480041.1 1748726 D 525146 CDS YP_002480042.1 220904730 7285160 complement(1750319..1750663) 1 NC_011883.1 hypothetical protein 1750663 7285160 Ddes_1462 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480042.1 1750319 R 525146 CDS YP_002480043.1 220904731 7285161 1751371..1753905 1 NC_011883.1 KEGG: bpl:BURPS1106A_2083 putative outer membrane protein; hypothetical protein 1753905 7285161 Ddes_1463 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480043.1 1751371 D 525146 CDS YP_002480044.1 220904732 7285162 1754324..1755757 1 NC_011883.1 KEGG: dvl:Dvul_0905 hypothetical protein; hypothetical protein 1755757 7285162 Ddes_1464 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480044.1 1754324 D 525146 CDS YP_002480045.1 220904733 7285163 1755818..1756141 1 NC_011883.1 KEGG: mhu:Mhun_0339 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 1756141 7285163 Ddes_1465 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nitrogen regulatory protein P-II YP_002480045.1 1755818 D 525146 CDS YP_002480046.1 220904734 7285164 complement(1756312..1757589) 1 NC_011883.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: tpd:Teth39_1192 competence damage-inducible protein A; competence/damage-inducible protein CinA 1757589 7285164 Ddes_1466 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 competence/damage-inducible protein CinA YP_002480046.1 1756312 R 525146 CDS YP_002480047.1 220904735 7285165 1757789..1757944 1 NC_011883.1 hypothetical protein 1757944 7285165 Ddes_1467 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480047.1 1757789 D 525146 CDS YP_002480048.1 220904736 7285166 1757941..1759233 1 NC_011883.1 KEGG: cbe:Cbei_0766 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 1759233 7285166 Ddes_1468 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_002480048.1 1757941 D 525146 CDS YP_002480049.1 220904737 7285167 1759497..1759952 1 NC_011883.1 hypothetical protein 1759952 7285167 Ddes_1469 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480049.1 1759497 D 525146 CDS YP_002480050.1 220904738 7285168 1760276..1761046 1 NC_011883.1 KEGG: dol:Dole_2023 hypothetical protein; hypothetical protein 1761046 7285168 Ddes_1470 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480050.1 1760276 D 525146 CDS YP_002480051.1 220904739 7285169 1761277..1761900 1 NC_011883.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1761900 7285169 Ddes_1471 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobalt transport protein CbiM YP_002480051.1 1761277 D 525146 CDS YP_002480052.1 220904740 7285170 1762052..1762852 1 NC_011883.1 KEGG: dvl:Dvul_1922 hypothetical protein; hypothetical protein 1762852 7285170 Ddes_1472 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480052.1 1762052 D 525146 CDS YP_002480053.1 220904741 7285171 1762870..1763631 1 NC_011883.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter, inner membrane subunit CbiQ; cobalt ABC transporter inner membrane subunit CbiQ 1763631 7285171 Ddes_1473 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobalt ABC transporter inner membrane subunit CbiQ YP_002480053.1 1762870 D 525146 CDS YP_002480054.1 220904742 7285172 1763624..1764376 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1938 ABC transporter related; ABC transporter-like protein 1764376 7285172 Ddes_1474 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480054.1 1763624 D 525146 CDS YP_002480055.1 220904743 7285173 1764700..1766115 1 NC_011883.1 KEGG: met:M446_2203 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 1766115 7285173 Ddes_1475 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PAS/PAC sensor-containing diguanylate cyclase YP_002480055.1 1764700 D 525146 CDS YP_002480056.1 220904744 7285174 1766141..1767223 1 NC_011883.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dvu:DVU3191 ribosomal large subunit pseudouridine synthase C; pseudouridine synthase 1767223 7285174 Ddes_1476 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pseudouridine synthase YP_002480056.1 1766141 D 525146 CDS YP_002480057.1 220904745 7285175 1767304..1768668 1 NC_011883.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1768668 engA 7285175 engA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTP-binding protein EngA YP_002480057.1 1767304 D 525146 CDS YP_002480058.1 220904746 7285176 1768920..1770050 1 NC_011883.1 PFAM: Extracellular ligand-binding receptor; KEGG: dvl:Dvul_2397 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1770050 7285176 Ddes_1478 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 extracellular ligand-binding receptor YP_002480058.1 1768920 D 525146 CDS YP_002480059.1 220904747 7285177 1770178..1771086 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: dvl:Dvul_2396 inner-membrane translocator; inner-membrane translocator 1771086 7285177 Ddes_1479 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002480059.1 1770178 D 525146 CDS YP_002480060.1 220904748 7285178 1771089..1772312 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: dvu:DVU0549 high-affinity branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 1772312 7285178 Ddes_1480 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002480060.1 1771089 D 525146 CDS YP_002480061.1 220904749 7285179 1772309..1773094 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2394 ABC transporter related; ABC transporter-like protein 1773094 7285179 Ddes_1481 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480061.1 1772309 D 525146 CDS YP_002480062.1 220904750 7285180 1773087..1773791 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2393 ABC transporter related; ABC transporter-like protein 1773791 7285180 Ddes_1482 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480062.1 1773087 D 525146 CDS YP_002480063.1 220904751 7285181 complement(1773900..1774928) 1 NC_011883.1 PFAM: Domain of unknown function DUF1848; KEGG: cpc:Cpar_0387 domain of unknown function DUF1848; hypothetical protein 1774928 7285181 Ddes_1483 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480063.1 1773900 R 525146 CDS YP_002480064.1 220904752 7285182 1775081..1775248 1 NC_011883.1 hypothetical protein 1775248 7285182 Ddes_1484 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480064.1 1775081 D 525146 CDS YP_002480065.1 220904753 7285183 1775248..1775655 1 NC_011883.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: dvl:Dvul_1716 putative 6-pyruvoyl tetrahydropterin synthase; queuosine biosynthesis protein QueD 1775655 7285183 Ddes_1485 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 queuosine biosynthesis protein QueD YP_002480065.1 1775248 D 525146 CDS YP_002480066.1 220904754 7285184 1775678..1776523 1 NC_011883.1 KEGG: dvl:Dvul_0466 hypothetical protein; hypothetical protein 1776523 7285184 Ddes_1486 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480066.1 1775678 D 525146 CDS YP_002480067.1 220904755 7285185 1776543..1777166 1 NC_011883.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pca:Pcar_0173 multimeric flavodoxin WrbA; NADPH-dependent FMN reductase 1777166 7285185 Ddes_1487 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADPH-dependent FMN reductase YP_002480067.1 1776543 D 525146 CDS YP_002480068.1 220904756 7285186 complement(1777534..1778031) 1 NC_011883.1 hypothetical protein 1778031 7285186 Ddes_1488 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480068.1 1777534 R 525146 CDS YP_002480069.1 220904757 7285187 1778172..1778960 1 NC_011883.1 PFAM: Ion transport 2 domain protein; KEGG: amr:AM1_0155 ion transport protein, putative; Ion transport 2 domain-containing protein 1778960 7285187 Ddes_1489 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ion transport 2 domain-containing protein YP_002480069.1 1778172 D 525146 CDS YP_002480070.1 220904758 7285188 complement(1779129..1780283) 1 NC_011883.1 PFAM: ABC-2 type transporter; KEGG: hne:HNE_1536 ABC transporter, permease protein; ABC-2 type transporter 1780283 7285188 Ddes_1490 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC-2 type transporter YP_002480070.1 1779129 R 525146 CDS YP_002480071.1 220904759 7285189 complement(1780339..1781466) 1 NC_011883.1 PFAM: ABC-2 type transporter; KEGG: smd:Smed_4696 ABC-2 type transporter; ABC-2 type transporter 1781466 7285189 Ddes_1491 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC-2 type transporter YP_002480071.1 1780339 R 525146 CDS YP_002480072.1 220904760 7285190 complement(1781543..1783396) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2369 ABC transporter related; ABC transporter-like protein 1783396 7285190 Ddes_1492 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480072.1 1781543 R 525146 CDS YP_002480073.1 220904761 7285191 complement(1783393..1784391) 1 NC_011883.1 PFAM: secretion protein HlyD family protein; KEGG: smd:Smed_4698 hypothetical protein; secretion protein HlyD family protein 1784391 7285191 Ddes_1493 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 secretion protein HlyD family protein YP_002480073.1 1783393 R 525146 CDS YP_002480074.1 220904762 7285192 complement(1784948..1786405) 1 NC_011883.1 PFAM: Catalase domain protein; KEGG: dvl:Dvul_3018 catalase; catalase 1786405 7285192 Ddes_1494 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 catalase YP_002480074.1 1784948 R 525146 CDS YP_002480075.1 220904763 7285193 complement(1786577..1787305) 1 NC_011883.1 PFAM: Sporulation domain protein; KEGG: dvl:Dvul_1815 sporulation domain-containing protein; sporulation domain-containing protein 1787305 7285193 Ddes_1495 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sporulation domain-containing protein YP_002480075.1 1786577 R 525146 CDS YP_002480076.1 220904764 7285194 1787613..1788596 1 NC_011883.1 hypothetical protein 1788596 7285194 Ddes_1496 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480076.1 1787613 D 525146 CDS YP_002480077.1 220904765 7285195 complement(1788933..1789601) 1 NC_011883.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: dvl:Dvul_0929 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 1789601 7285195 Ddes_1497 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase nickel incorporation protein HypB YP_002480077.1 1788933 R 525146 CDS YP_002480078.1 220904766 7285196 complement(1789772..1790125) 1 NC_011883.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: dvl:Dvul_0930 hydrogenase expression/synthesis, HypA; hydrogenase nickel incorporation protein HypA 1790125 7285196 Ddes_1498 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase nickel incorporation protein HypA YP_002480078.1 1789772 R 525146 CDS YP_002480079.1 220904767 7285197 1790195..1791463 1 NC_011883.1 KEGG: lip:LI0247 hypothetical protein; hypothetical protein 1791463 7285197 Ddes_1499 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480079.1 1790195 D 525146 CDS YP_002480080.1 220904768 7285198 1791507..1792340 1 NC_011883.1 KEGG: dvl:Dvul_0932 hypothetical protein; putative FHA domain-containing protein 1792340 7285198 Ddes_1500 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative FHA domain-containing protein YP_002480080.1 1791507 D 525146 CDS YP_002480081.1 220904769 7285199 complement(1792451..1793677) 1 NC_011883.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: dvu:DVU1768 GTP-binding protein; small GTP-binding protein 1793677 7285199 Ddes_1501 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small GTP-binding protein YP_002480081.1 1792451 R 525146 CDS YP_002480082.1 220904770 7285200 complement(1793814..1794188) 1 NC_011883.1 PFAM: iron hydrogenase small subunit; KEGG: dvl:Dvul_1385 ferredoxin hydrogenase; ferredoxin hydrogenase 1794188 7285200 Ddes_1502 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ferredoxin hydrogenase YP_002480082.1 1793814 R 525146 CDS YP_002480083.1 220904771 7285201 complement(1794197..1795453) 1 NC_011883.1 KEGG: dvl:Dvul_1386 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; hydrogenase, Fe-only 1795453 7285201 Ddes_1503 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase, Fe-only YP_002480083.1 1794197 R 525146 CDS YP_002480084.1 220904772 7285202 complement(1795556..1796551) 1 NC_011883.1 catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 1796551 7285202 Ddes_1504 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 biotin synthase YP_002480084.1 1795556 R 525146 CDS YP_002480085.1 220904773 7285203 complement(1796577..1797980) 1 NC_011883.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 1797980 thiH 7285203 thiH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine biosynthesis protein ThiH YP_002480085.1 1796577 R 525146 CDS YP_002480086.1 220904774 7285204 1798860..1799279 1 NC_011883.1 hypothetical protein 1799279 7285204 Ddes_1506 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480086.1 1798860 D 525146 CDS YP_002480087.1 220904775 7285205 1799444..1800781 1 NC_011883.1 PFAM: sodium:dicarboxylate symporter; KEGG: ypb:YPTS_4048 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1800781 7285205 Ddes_1507 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sodium:dicarboxylate symporter YP_002480087.1 1799444 D 525146 CDS YP_002480088.1 220904776 7285206 1801281..1801850 1 NC_011883.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: swo:Swol_1664 formylmethanofuran dehydrogenase, subunit E region; formylmethanofuran dehydrogenase subunit E 1801850 7285206 Ddes_1508 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formylmethanofuran dehydrogenase subunit E YP_002480088.1 1801281 D 525146 CDS YP_002480089.1 220904777 7285207 1801843..1802616 1 NC_011883.1 PFAM: protein of unknown function DUF364; KEGG: swo:Swol_1665 protein of unknown function DUF364; hypothetical protein 1802616 7285207 Ddes_1509 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480089.1 1801843 D 525146 CDS YP_002480090.1 220904778 7285208 1802607..1803434 1 NC_011883.1 KEGG: amt:Amet_1511 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 1803434 7285208 Ddes_1510 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cyclopropane-fatty-acyl-phospholipid synthase YP_002480090.1 1802607 D 525146 CDS YP_002480091.1 220904779 7285209 complement(1803664..1805250) 1 NC_011883.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cpr:CPR_1917 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein; 5'-nucleotidase 1805250 7285209 Ddes_1511 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 5'-nucleotidase YP_002480091.1 1803664 R 525146 CDS YP_002480092.1 220904780 7285210 complement(1805261..1806211) 1 NC_011883.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: ppd:Ppro_1537 TonB family protein; TonB family protein 1806211 7285210 Ddes_1512 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TonB family protein YP_002480092.1 1805261 R 525146 CDS YP_002480093.1 220904781 7285211 complement(1806208..1806966) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3704 ABC transporter related; ABC transporter-like protein 1806966 7285211 Ddes_1513 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480093.1 1806208 R 525146 CDS YP_002480094.1 220904782 7285212 complement(1806963..1807970) 1 NC_011883.1 PFAM: transport system permease protein; KEGG: nha:Nham_0954 transport system permease protein; transport system permease 1807970 7285212 Ddes_1514 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transport system permease YP_002480094.1 1806963 R 525146 CDS YP_002480095.1 220904783 7285213 complement(1807957..1808994) 1 NC_011883.1 PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic binding protein 1808994 7285213 Ddes_1515 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 periplasmic binding protein YP_002480095.1 1807957 R 525146 CDS YP_002480096.1 220904784 7285214 complement(1809375..1811447) 1 NC_011883.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sat:SYN_01048 iron(III) dicitrate transport protein; TonB-dependent receptor 1811447 7285214 Ddes_1516 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TonB-dependent receptor YP_002480096.1 1809375 R 525146 CDS YP_002480097.1 220904785 7285215 1812374..1812820 1 NC_011883.1 PFAM: UspA domain protein; KEGG: dvu:DVU0423 universal stress protein; UspA domain-containing protein 1812820 7285215 Ddes_1517 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UspA domain-containing protein YP_002480097.1 1812374 D 525146 CDS YP_002480098.1 220904786 7285216 1813039..1814463 1 NC_011883.1 KEGG: dvl:Dvul_0905 hypothetical protein; hypothetical protein 1814463 7285216 Ddes_1518 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480098.1 1813039 D 525146 CDS YP_002480099.1 220904787 7285217 complement(1814927..1816156) 1 NC_011883.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 1816156 glpC 7285217 glpC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sn-glycerol-3-phosphate dehydrogenase subunit C YP_002480099.1 1814927 R 525146 CDS YP_002480100.1 220904788 7285218 complement(1816153..1817439) 1 NC_011883.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 1817439 7285218 Ddes_1520 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_002480100.1 1816153 R 525146 CDS YP_002480101.1 220904789 7285219 complement(1817423..1819030) 1 NC_011883.1 TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: drm:Dred_2844 FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 1819030 7285219 Ddes_1521 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycerol-3-phosphate dehydrogenase YP_002480101.1 1817423 R 525146 CDS YP_002480102.1 220904790 7285220 1819280..1820059 1 NC_011883.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dvl:Dvul_1227 HAD family hydrolase; HAD-superfamily hydrolase 1820059 7285220 Ddes_1522 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HAD-superfamily hydrolase YP_002480102.1 1819280 D 525146 CDS YP_002480103.1 220904791 7285221 complement(1820247..1821536) 1 NC_011883.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gka:GK1972 transporter; TRAP dicarboxylate transporter subunit DctM 1821536 7285221 Ddes_1523 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TRAP dicarboxylate transporter subunit DctM YP_002480103.1 1820247 R 525146 CDS YP_002480104.1 220904792 7285222 complement(1821546..1822106) 1 NC_011883.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bpa:BPP2118 ABC transporter; tripartite AtP-independent periplasmic transporter subunit DctQ 1822106 7285222 Ddes_1524 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tripartite AtP-independent periplasmic transporter subunit DctQ YP_002480104.1 1821546 R 525146 CDS YP_002480105.1 220904793 7285223 complement(1822224..1823228) 1 NC_011883.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein); TRAP dicarboxylate transporter subunit DctP 1823228 7285223 Ddes_1525 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TRAP dicarboxylate transporter subunit DctP YP_002480105.1 1822224 R 525146 CDS YP_002480106.1 220904794 7285224 complement(1823438..1823626) 1 NC_011883.1 hypothetical protein 1823626 7285224 Ddes_1526 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480106.1 1823438 R 525146 CDS YP_002480107.1 220904795 7285225 1824202..1825551 1 NC_011883.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mmq:MmarC5_1523 citrate transporter; anion transporter 1825551 7285225 Ddes_1527 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anion transporter YP_002480107.1 1824202 D 525146 CDS YP_002480108.1 220904796 7285226 1825624..1826469 1 NC_011883.1 KEGG: cha:CHAB381_0023 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 1826469 7285226 Ddes_1528 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_002480108.1 1825624 D 525146 CDS YP_002480109.1 220904797 7285227 1826479..1827039 1 NC_011883.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: wsu:WS1767 fumarate hydratase B, beta subunit; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 1827039 7285227 Ddes_1529 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_002480109.1 1826479 D 525146 CDS YP_002480110.1 220904798 7285228 1827098..1827727 1 NC_011883.1 PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sfu:Sfum_2000 fumarate reductase respiratory complex, transmembrane subunit; fumarate reductase respiratory complex transmembrane subunit 1827727 7285228 Ddes_1530 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 fumarate reductase respiratory complex transmembrane subunit YP_002480110.1 1827098 D 525146 CDS YP_002480111.1 220904799 7285229 1827738..1829594 1 NC_011883.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 1829594 7285229 Ddes_1531 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 fumarate reductase flavoprotein subunit YP_002480111.1 1827738 D 525146 CDS YP_002480112.1 220904800 7285230 1829606..1830391 1 NC_011883.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 1830391 frdB 7285230 frdB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 fumarate reductase iron-sulfur subunit YP_002480112.1 1829606 D 525146 CDS YP_002480113.1 220904801 7285231 1830506..1831177 1 NC_011883.1 PFAM: CBS domain containing protein; KEGG: dvl:Dvul_0535 CBS domain-containing protein; hypothetical protein 1831177 7285231 Ddes_1533 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480113.1 1830506 D 525146 CDS YP_002480114.1 220904802 7285232 1831393..1832664 1 NC_011883.1 PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: dsy:DSY1923 hypothetical protein; malate dehydrogenase 1832664 7285232 Ddes_1534 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 malate dehydrogenase YP_002480114.1 1831393 D 525146 CDS YP_002480115.1 220904803 7285233 complement(1833121..1833747) 1 NC_011883.1 KEGG: bsu:BSU31520 sensory histidine kinase DcuS; signal transduction histidine kinase regulating citrate/malate metabolism 1833747 7285233 Ddes_1535 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 signal transduction histidine kinase regulating citrate/malate metabolism YP_002480115.1 1833121 R 525146 CDS YP_002480116.1 220904804 7285234 complement(1833949..1836108) 1 NC_011883.1 KEGG: dvu:DVU2083 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 1836108 7285234 Ddes_1536 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 (p)ppGpp synthetase I SpoT/RelA YP_002480116.1 1833949 R 525146 CDS YP_002480117.1 220904805 7285235 1836474..1836692 1 NC_011883.1 hypothetical protein 1836692 7285235 Ddes_1537 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480117.1 1836474 D 525146 CDS YP_002480118.1 220904806 7285236 complement(1836812..1838503) 1 NC_011883.1 PFAM: extracellular solute-binding protein family 5; KEGG: dvl:Dvul_1145 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1838503 7285236 Ddes_1538 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 5 extracellular solute-binding protein YP_002480118.1 1836812 R 525146 CDS YP_002480119.1 220904807 7285237 1838622..1841897 1 NC_011883.1 KEGG: dvl:Dvul_1144 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases; Non-specific serine/threonine protein kinase 1841897 7285237 Ddes_1539 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Non-specific serine/threonine protein kinase YP_002480119.1 1838622 D 525146 CDS YP_002480120.1 220904808 7285238 1842222..1843268 1 NC_011883.1 PFAM: ABC transporter related; ABC transporter, conserved site; SMART: AAA ATPase; KEGG: cno:NT01CX_0186 ABC transporter, ATP-binding protein; ABC transporter-like protein 1843268 7285238 Ddes_1540 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480120.1 1842222 D 525146 CDS YP_002480121.1 220904809 7285239 1843261..1843968 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckl:CKL_0666 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 1843968 7285239 Ddes_1541 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002480121.1 1843261 D 525146 CDS YP_002480122.1 220904810 7285240 1844039..1844815 1 NC_011883.1 PFAM: NLPA lipoprotein; KEGG: cno:NT01CX_0184 NlpA family lipoprotein; NLPA lipoprotein 1844815 7285240 Ddes_1542 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NLPA lipoprotein YP_002480122.1 1844039 D 525146 CDS YP_002480123.1 220904811 7285241 1845338..1847194 1 NC_011883.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mta:Moth_2314 respiratory-chain NADH dehydrogenase, 51 kDa subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1847194 7285241 Ddes_1543 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002480123.1 1845338 D 525146 CDS YP_002480124.1 220904812 7285242 1847420..1848544 1 NC_011883.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: dol:Dole_0845 molybdopterin oxidoreductase Fe4s4 region; molybdopterin oxidoreductase Fe4S4 region 1848544 7285242 Ddes_1544 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdopterin oxidoreductase Fe4S4 region YP_002480124.1 1847420 D 525146 CDS YP_002480125.1 220904813 7285243 1848593..1850176 1 NC_011883.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sfu:Sfum_3509 formate dehydrogenase, alpha subunit; molybdopterin oxidoreductase 1850176 7285243 Ddes_1545 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdopterin oxidoreductase YP_002480125.1 1848593 D 525146 CDS YP_002480126.1 220904814 7285244 1850477..1853293 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: dvl:Dvul_2725 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 1853293 7285244 Ddes_1546 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 D-lactate dehydrogenase YP_002480126.1 1850477 D 525146 CDS YP_002480127.1 220904815 7285245 1854032..1854319 1 NC_011883.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1854319 groES 7285245 groES Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 co-chaperonin GroES YP_002480127.1 1854032 D 525146 CDS YP_002480128.1 220904816 7285246 1854361..1856010 1 NC_011883.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1856010 groEL 7285246 groEL Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chaperonin GroEL YP_002480128.1 1854361 D 525146 CDS YP_002480129.1 220904817 7285247 1856089..1857345 1 NC_011883.1 PFAM: UV-endonuclease UvdE; KEGG: amt:Amet_0131 putative UV damage endonuclease; UV-endonuclease UvdE 1857345 7285247 Ddes_1549 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UV-endonuclease UvdE YP_002480129.1 1856089 D 525146 CDS YP_002480130.1 220904818 7285248 complement(1857509..1858114) 1 NC_011883.1 PFAM: regulatory protein TetR; KEGG: smt:Smal_3546 transcriptional regulator, TetR family; TetR family transcriptional regulator 1858114 7285248 Ddes_1550 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TetR family transcriptional regulator YP_002480130.1 1857509 R 525146 CDS YP_002480131.1 220904819 7285250 complement(1859873..1863448) 1 NC_011883.1 PFAM: PEP-utilizing protein; pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvl:Dvul_1329 PEP-utilising enzyme, mobile region; pyruvate phosphate dikinase 1863448 7285250 Ddes_1552 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate phosphate dikinase YP_002480131.1 1859873 R 525146 CDS YP_002480132.1 220904820 7285251 complement(1863713..1867414) 1 NC_011883.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1867414 7285251 Ddes_1553 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate carboxylase YP_002480132.1 1863713 R 525146 CDS YP_002480133.1 220904821 7285252 complement(1867420..1868253) 1 NC_011883.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: dvl:Dvul_1327 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 1868253 7285252 Ddes_1554 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 biotin--acetyl-CoA-carboxylase ligase YP_002480133.1 1867420 R 525146 CDS YP_002480134.1 220904822 7285253 1868288..1869352 1 NC_011883.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: dvu:DVU1836 tRNA nucleotidyltransferase, putative; polynucleotide adenylyltransferase 1869352 7285253 Ddes_1555 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polynucleotide adenylyltransferase YP_002480134.1 1868288 D 525146 CDS YP_002480135.1 220904823 7285254 complement(1869651..1870121) 1 NC_011883.1 PFAM: protein of unknown function UPF0054; KEGG: dvl:Dvul_1281 hypothetical protein; hypothetical protein 1870121 7285254 Ddes_1556 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480135.1 1869651 R 525146 CDS YP_002480136.1 220904824 7285255 complement(1870118..1872673) 1 NC_011883.1 KEGG: dvl:Dvul_1282 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1872673 7285255 Ddes_1557 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002480136.1 1870118 R 525146 CDS YP_002480137.1 220904825 7285256 complement(1872639..1873637) 1 NC_011883.1 PFAM: PhoH family protein; KEGG: dvl:Dvul_1283 PhoH family protein; PhoH family protein 1873637 7285256 Ddes_1558 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PhoH family protein YP_002480137.1 1872639 R 525146 CDS YP_002480138.1 220904826 7285257 1873830..1875053 1 NC_011883.1 KEGG: lip:LI0899 hypothetical protein; hypothetical protein 1875053 7285257 Ddes_1559 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480138.1 1873830 D 525146 CDS YP_002480139.1 220904827 7285258 1875627..1876535 1 NC_011883.1 PFAM: extracellular solute-binding protein family 3; KEGG: pmr:PMI0437 glutamate/aspartate ABC transporter, substrate-binding protein; family 3 extracellular solute-binding protein 1876535 7285258 Ddes_1560 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 3 extracellular solute-binding protein YP_002480139.1 1875627 D 525146 CDS YP_002480140.1 220904828 7285259 1876655..1877404 1 NC_011883.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmr:PMI0436 glutamate/aspartate ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 1877404 7285259 Ddes_1561 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polar amino acid ABC transporter inner membrane subunit YP_002480140.1 1876655 D 525146 CDS YP_002480141.1 220904829 7285260 1877397..1878074 1 NC_011883.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stm:STM0663 glutamate/aspartate transporter; polar amino acid ABC transporter inner membrane subunit 1878074 7285260 Ddes_1562 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polar amino acid ABC transporter inner membrane subunit YP_002480141.1 1877397 D 525146 CDS YP_002480142.1 220904830 7285261 1878095..1878823 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: esa:ESA_02684 hypothetical protein; ABC transporter-like protein 1878823 7285261 Ddes_1563 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480142.1 1878095 D 525146 CDS YP_002480143.1 220904831 7285262 complement(1878993..1879964) 1 NC_011883.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: amt:Amet_0678 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1879964 7285262 Ddes_1564 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_002480143.1 1878993 R 525146 CDS YP_002480144.1 220904832 7285263 complement(1880689..1883304) 1 NC_011883.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvu:DVU3214 phosphoenolpyruvate synthase-related protein; pyruvate, water dikinase 1883304 7285263 Ddes_1565 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate, water dikinase YP_002480144.1 1880689 R 525146 CDS YP_002480145.1 220904833 7285264 complement(1883306..1883686) 1 NC_011883.1 PFAM: response regulator receiver; KEGG: dvl:Dvul_0173 response regulator receiver protein; response regulator receiver protein 1883686 7285264 Ddes_1566 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver protein YP_002480145.1 1883306 R 525146 CDS YP_002480146.1 220904834 7285265 complement(1883844..1885547) 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_0172 integral membrane sensor signal transduction histidine kinase; histidine kinase 1885547 7285265 Ddes_1567 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine kinase YP_002480146.1 1883844 R 525146 CDS YP_002480147.1 220904835 7285266 complement(1885550..1888159) 1 NC_011883.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvl:Dvul_0151 pyruvate, water dikinase; pyruvate phosphate dikinase 1888159 7285266 Ddes_1568 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate phosphate dikinase YP_002480147.1 1885550 R 525146 CDS YP_002480148.1 220904836 7285267 complement(1888702..1890216) 1 NC_011883.1 KEGG: dvl:Dvul_2671 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; ATPase FliI/YscN; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; ATPase FliI/YscN 1890216 7285267 Ddes_1569 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATPase FliI/YscN YP_002480148.1 1888702 R 525146 CDS YP_002480149.1 220904837 7285268 complement(1890232..1892154) 1 NC_011883.1 KEGG: dvl:Dvul_2670 flagellar assembly protein FliH, putative; hypothetical protein 1892154 7285268 Ddes_1570 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480149.1 1890232 R 525146 CDS YP_002480150.1 220904838 7285269 complement(1892259..1893254) 1 NC_011883.1 PFAM: flagellar motor switch protein FliG; KEGG: dvu:DVU0312 flagellar motor switch protein FliG; flagellar motor switch protein FliG 1893254 7285269 Ddes_1571 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar motor switch protein FliG YP_002480150.1 1892259 R 525146 CDS YP_002480151.1 220904839 7285271 complement(1893496..1895139) 1 NC_011883.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: lip:LI0857 flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar M-ring protein FliF 1895139 7285271 Ddes_1573 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar M-ring protein FliF YP_002480151.1 1893496 R 525146 CDS YP_002480152.1 220904840 7285272 complement(1895579..1896025) 1 NC_011883.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: dvl:Dvul_2667 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 1896025 7285272 Ddes_1574 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar hook-basal body complex subunit FliE YP_002480152.1 1895579 R 525146 CDS YP_002480153.1 220904841 7285273 complement(1896082..1896519) 1 NC_011883.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: lip:LI0859 flagellar basal body rod protein; flagellar basal-body rod protein FlgC 1896519 7285273 Ddes_1575 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar basal-body rod protein FlgC YP_002480153.1 1896082 R 525146 CDS YP_002480154.1 220904842 7285274 complement(1896684..1897097) 1 NC_011883.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 1897097 flgB 7285274 flgB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar basal body rod protein FlgB YP_002480154.1 1896684 R 525146 CDS YP_002480155.1 220904843 7285275 complement(1897521..1898138) 1 NC_011883.1 SMART: ParB domain protein nuclease; KEGG: ppr:PBPRA1349 hypothetical protein; ParB domain-containing protein nuclease 1898138 7285275 Ddes_1577 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ParB domain-containing protein nuclease YP_002480155.1 1897521 R 525146 CDS YP_002480156.1 220904844 7285276 complement(1898128..1898559) 1 NC_011883.1 hypothetical protein 1898559 7285276 Ddes_1578 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480156.1 1898128 R 525146 CDS YP_002480157.1 220904845 7285277 complement(1898567..1899757) 1 NC_011883.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: ppr:PBPRA1348 hypothetical protein; phosphoadenosine phosphosulfate reductase 1899757 7285277 Ddes_1579 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoadenosine phosphosulfate reductase YP_002480157.1 1898567 R 525146 CDS YP_002480158.1 220904846 7285278 complement(1900318..1902378) 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_2346 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1902378 7285278 Ddes_1580 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002480158.1 1900318 R 525146 CDS YP_002480159.1 220904847 7285279 1902488..1902613 1 NC_011883.1 hypothetical protein 1902613 7285279 Ddes_1581 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480159.1 1902488 D 525146 CDS YP_002480160.1 220904848 7285280 complement(1902874..1903404) 1 NC_011883.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: amr:AM1_2401 exonuclease; Exonuclease RNase T and DNA polymerase III 1903404 7285280 Ddes_1582 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Exonuclease RNase T and DNA polymerase III YP_002480160.1 1902874 R 525146 CDS YP_002480161.1 220904849 7285281 complement(1903407..1903835) 1 NC_011883.1 KEGG: dol:Dole_1637 hypothetical protein; hypothetical protein 1903835 7285281 Ddes_1583 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480161.1 1903407 R 525146 CDS YP_002480162.1 220904850 7285282 complement(1903850..1904254) 1 NC_011883.1 PFAM: nuclease (SNase domain protein); KEGG: dvu:DVU1481 nuclease domain-containing protein; nuclease 1904254 7285282 Ddes_1584 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nuclease YP_002480162.1 1903850 R 525146 CDS YP_002480163.1 220904851 7285283 complement(1904627..1906798) 1 NC_011883.1 TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: dvl:Dvul_0675 ferrous iron transport protein B; ferrous iron transport protein B 1906798 7285283 Ddes_1585 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ferrous iron transport protein B YP_002480163.1 1904627 R 525146 CDS YP_002480164.1 220904852 7285284 complement(1907462..1907737) 1 NC_011883.1 KEGG: dvl:Dvul_2677 hypothetical protein; hypothetical protein 1907737 7285284 Ddes_1586 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480164.1 1907462 R 525146 CDS YP_002480165.1 220904853 7285285 complement(1908136..1908903) 1 NC_011883.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1908903 trpA 7285285 trpA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tryptophan synthase subunit alpha YP_002480165.1 1908136 R 525146 CDS YP_002480166.1 220904854 7285286 complement(1908906..1910096) 1 NC_011883.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1910096 7285286 Ddes_1588 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tryptophan synthase subunit beta YP_002480166.1 1908906 R 525146 CDS YP_002480167.1 220904855 7285287 complement(1910093..1910728) 1 NC_011883.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: amu:Amuc_1534 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 1910728 7285287 Ddes_1589 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylanthranilate isomerase YP_002480167.1 1910093 R 525146 CDS YP_002480168.1 220904856 7285288 complement(1910718..1911599) 1 NC_011883.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: amu:Amuc_1533 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase 1911599 7285288 Ddes_1590 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 indole-3-glycerol-phosphate synthase YP_002480168.1 1910718 R 525146 CDS YP_002480169.1 220904857 7285289 complement(1911589..1913181) 1 NC_011883.1 TIGRFAM: anthranilate phosphoribosyltransferase; glutamine amidotransferase of anthranilate synthase; PFAM: glycosyl transferase family 3; glutamine amidotransferase class-I; Glycosyl transferase, family 3-like; KEGG: amu:Amuc_1532 anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 1913181 7285289 Ddes_1591 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anthranilate phosphoribosyltransferase YP_002480169.1 1911589 R 525146 CDS YP_002480170.1 220904858 7285290 complement(1913162..1914616) 1 NC_011883.1 PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: dvu:DVU0465 anthranilate synthase, component I; anthranilate synthase 1914616 7285290 Ddes_1592 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anthranilate synthase YP_002480170.1 1913162 R 525146 CDS YP_002480171.1 220904859 7285291 complement(1915042..1917234) 1 NC_011883.1 PFAM: glutamine synthetase catalytic region; KEGG: dvl:Dvul_1805 glutamine synthetase, catalytic region; glutamine synthetase 1917234 7285291 Ddes_1593 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamine synthetase YP_002480171.1 1915042 R 525146 CDS YP_002480172.1 220904860 7285292 complement(1917382..1917804) 1 NC_011883.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dvl:Dvul_0677 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 1917804 7285292 Ddes_1594 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FKBP-type peptidylprolyl isomerase YP_002480172.1 1917382 R 525146 CDS YP_002480173.1 220904861 7285293 1918085..1919362 1 NC_011883.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dvu:DVU2566 diaminopimelate decarboxylase; diaminopimelate decarboxylase 1919362 7285293 Ddes_1595 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diaminopimelate decarboxylase YP_002480173.1 1918085 D 525146 CDS YP_002480174.1 220904862 7285294 1919650..1920966 1 NC_011883.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dvu:DVU2555 MATE efflux family protein; MATE efflux family protein 1920966 7285294 Ddes_1596 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MATE efflux family protein YP_002480174.1 1919650 D 525146 CDS YP_002480175.1 220904863 7285295 1921020..1921913 1 NC_011883.1 KEGG: dvu:DVU2554 hypothetical protein; hypothetical protein 1921913 7285295 Ddes_1597 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480175.1 1921020 D 525146 CDS YP_002480176.1 220904864 7285296 1922081..1922413 1 NC_011883.1 PFAM: protein of unknown function UPF0060; KEGG: spe:Spro_2289 hypothetical protein; hypothetical protein 1922413 7285296 Ddes_1598 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480176.1 1922081 D 525146 CDS YP_002480177.1 220904865 7285298 1922758..1924137 1 NC_011883.1 PFAM: NLP/P60 protein; KEGG: dvl:Dvul_2088 NLP/P60 protein; NLP/P60 protein 1924137 7285298 Ddes_1599 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NLP/P60 protein YP_002480177.1 1922758 D 525146 CDS YP_002480178.1 220904866 7285299 1924134..1925711 1 NC_011883.1 TIGRFAM: dephospho-CoA kinase; pseudouridine synthase, RluA family; PFAM: Dephospho-CoA kinase; RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dvl:Dvul_1969 RluA family pseudouridine synthase; RluA family pseudouridine synthase 1925711 7285299 Ddes_1600 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RluA family pseudouridine synthase YP_002480178.1 1924134 D 525146 CDS YP_002480179.1 220904867 7285300 1925975..1928032 1 NC_011883.1 KEGG: mgm:Mmc1_2222 PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: GAF domain protein; GAF sensor hybrid histidine kinase 1928032 7285300 Ddes_1601 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GAF sensor hybrid histidine kinase YP_002480179.1 1925975 D 525146 CDS YP_002480180.1 220904868 7285301 1928068..1928556 1 NC_011883.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: dsy:DSY4980 hypothetical protein; ybaK/ebsC protein 1928556 7285301 Ddes_1602 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ybaK/ebsC protein YP_002480180.1 1928068 D 525146 CDS YP_002480181.1 220904869 7285303 1929095..1930153 1 NC_011883.1 hypothetical protein 1930153 7285303 Ddes_1604 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480181.1 1929095 D 525146 CDS YP_002480182.1 220904870 7285304 1930150..1932138 1 NC_011883.1 KEGG: bcy:Bcer98_3040 molecular chaperone DnaK; Molecular chaperone-like protein 1932138 7285304 Ddes_1605 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Molecular chaperone-like protein YP_002480182.1 1930150 D 525146 CDS YP_002480183.1 220904871 7285305 complement(1932364..1933032) 1 NC_011883.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein; Sel1 domain-containing protein 1933032 7285305 Ddes_1606 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Sel1 domain-containing protein YP_002480183.1 1932364 R 525146 CDS YP_002480184.1 220904872 7285306 1933532..1934110 1 NC_011883.1 KEGG: hypothetical protein; hypothetical protein 1934110 7285306 Ddes_1607 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480184.1 1933532 D 525146 CDS YP_002480185.1 220904873 7285307 1934137..1934412 1 NC_011883.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: tcx:Tcr_1103 excinuclease ABC subunit C; excinuclease ABC C subunit domain-containing protein 1934412 7285307 Ddes_1608 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 excinuclease ABC C subunit domain-containing protein YP_002480185.1 1934137 D 525146 CDS YP_002480186.1 220904874 7285308 1934406..1935038 1 NC_011883.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pca:Pcar_0784 amino acid efflux/transport protein; lysine exporter protein LysE/YggA 1935038 7285308 Ddes_1609 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lysine exporter protein LysE/YggA YP_002480186.1 1934406 D 525146 CDS YP_002480187.1 220904875 7285309 1935300..1935878 1 NC_011883.1 PFAM: protein of unknown function DUF177; KEGG: dvl:Dvul_1847 hypothetical protein; hypothetical protein 1935878 7285309 Ddes_1610 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480187.1 1935300 D 525146 CDS YP_002480188.1 220904876 7285310 1936142..1936324 1 NC_011883.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1936324 rpmF 7285310 rpmF Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L32 YP_002480188.1 1936142 D 525146 CDS YP_002480189.1 220904877 7285311 1936324..1937358 1 NC_011883.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1937358 7285311 Ddes_1612 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative glycerol-3-phosphate acyltransferase PlsX YP_002480189.1 1936324 D 525146 CDS YP_002480190.1 220904878 7285312 1937374..1938360 1 NC_011883.1 KEGG: dvl:Dvul_1850 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1938360 7285312 Ddes_1613 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-oxoacyl-(acyl-carrier-protein) synthase III YP_002480190.1 1937374 D 525146 CDS YP_002480191.1 220904879 7285313 1938647..1939408 1 NC_011883.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dvu:DVU1206 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1939408 7285313 Ddes_1614 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-oxoacyl-(acyl-carrier-protein) reductase YP_002480191.1 1938647 D 525146 CDS YP_002480192.1 220904880 7285314 1939721..1939954 1 NC_011883.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1939954 acpP 7285314 acpP Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acyl carrier protein YP_002480192.1 1939721 D 525146 CDS YP_002480193.1 220904881 7285315 1940026..1941276 1 NC_011883.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: dvl:Dvul_1853 beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 1941276 7285315 Ddes_1616 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_002480193.1 1940026 D 525146 CDS YP_002480194.1 220904882 7285316 1941675..1942919 1 NC_011883.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1942919 glyA 7285316 glyA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 serine hydroxymethyltransferase YP_002480194.1 1941675 D 525146 CDS YP_002480195.1 220904883 7285317 1943357..1943833 1 NC_011883.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dvl:Dvul_1855 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase 1943833 7285317 Ddes_1618 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CMP/dCMP deaminase YP_002480195.1 1943357 D 525146 CDS YP_002480196.1 220904884 7285318 1943836..1944993 1 NC_011883.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: dvl:Dvul_1856 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 1944993 7285318 Ddes_1619 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 riboflavin biosynthesis protein RibD YP_002480196.1 1943836 D 525146 CDS YP_002480197.1 220904885 7285319 1945000..1945674 1 NC_011883.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1945674 7285319 Ddes_1620 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 riboflavin synthase subunit alpha YP_002480197.1 1945000 D 525146 CDS YP_002480198.1 220904886 7285320 1945868..1946338 1 NC_011883.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1946338 ribH 7285320 ribH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 6,7-dimethyl-8-ribityllumazine synthase YP_002480198.1 1945868 D 525146 CDS YP_002480199.1 220904887 7285321 1946342..1946836 1 NC_011883.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: dvl:Dvul_1860 NusB antitermination factor; NusB antitermination factor 1946836 7285321 Ddes_1622 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NusB antitermination factor YP_002480199.1 1946342 D 525146 CDS YP_002480200.1 220904888 7285322 1946850..1949363 1 NC_011883.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1949363 leuS 7285322 leuS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 leucyl-tRNA synthetase YP_002480200.1 1946850 D 525146 CDS YP_002480201.1 220904889 7285323 1949646..1950686 1 NC_011883.1 PFAM: DNA polymerase III delta; KEGG: dvl:Dvul_1863 DNA polymerase III, delta; DNA polymerase III delta 1950686 7285323 Ddes_1624 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA polymerase III delta YP_002480201.1 1949646 D 525146 CDS YP_002480202.1 220904890 7285324 1950793..1951482 1 NC_011883.1 PFAM: DNA repair protein RadC; KEGG: dvl:Dvul_1864 DNA repair protein RadC; DNA repair protein RadC 1951482 7285324 Ddes_1625 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA repair protein RadC YP_002480202.1 1950793 D 525146 CDS YP_002480203.1 220904891 7285325 1951500..1954142 1 NC_011883.1 KEGG: dvu:DVU1191 ATP-dependent protease La, putative; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1954142 7285325 Ddes_1626 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent protease La YP_002480203.1 1951500 D 525146 CDS YP_002480204.1 220904892 7285326 1954148..1955065 1 NC_011883.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: dvu:DVU2916 HemK protein; HemK family modification methylase 1955065 7285326 Ddes_1627 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HemK family modification methylase YP_002480204.1 1954148 D 525146 CDS YP_002480205.1 220904893 7285330 1955853..1957046 1 NC_011883.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1957046 7285330 Ddes_1628 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 elongation factor Tu YP_002480205.1 1955853 D 525146 CDS YP_002480206.1 220904894 7285331 1957051..1957200 1 NC_011883.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1957200 rpmG 7285331 rpmG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L33 YP_002480206.1 1957051 D 525146 CDS YP_002480207.1 220904895 7285333 1957342..1957581 1 NC_011883.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1957581 secE 7285333 secE Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 preprotein translocase subunit SecE YP_002480207.1 1957342 D 525146 CDS YP_002480208.1 220904896 7285334 1957590..1958162 1 NC_011883.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: dvl:Dvul_0444 NusG antitermination factor; NusG antitermination factor 1958162 7285334 Ddes_1631 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NusG antitermination factor YP_002480208.1 1957590 D 525146 CDS YP_002480209.1 220904897 7285335 1958337..1958759 1 NC_011883.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1958759 rplK 7285335 rplK Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L11 YP_002480209.1 1958337 D 525146 CDS YP_002480210.1 220904898 7285336 1958939..1959646 1 NC_011883.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1959646 rplA 7285336 rplA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L1 YP_002480210.1 1958939 D 525146 CDS YP_002480211.1 220904899 7285337 1959813..1960337 1 NC_011883.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1960337 rplJ 7285337 rplJ Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L10 YP_002480211.1 1959813 D 525146 CDS YP_002480212.1 220904900 7285338 1960389..1960775 1 NC_011883.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1960775 rplL 7285338 rplL Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L7/L12 YP_002480212.1 1960389 D 525146 CDS YP_002480213.1 220904901 7285339 1961243..1965379 1 NC_011883.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1965379 rpoB 7285339 rpoB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA-directed RNA polymerase subunit beta YP_002480213.1 1961243 D 525146 CDS YP_002480214.1 220904902 7285340 1965501..1969670 1 NC_011883.1 KEGG: dvl:Dvul_0438 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 1969670 7285340 Ddes_1637 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA-directed RNA polymerase subunit beta' YP_002480214.1 1965501 D 525146 CDS YP_002480215.1 220904903 7285341 complement(1969956..1970891) 1 NC_011883.1 KEGG: dvl:Dvul_2821 hypothetical protein; hypothetical protein 1970891 7285341 Ddes_1638 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480215.1 1969956 R 525146 CDS YP_002480216.1 220904904 7285342 complement(1971089..1971403) 1 NC_011883.1 hypothetical protein 1971403 7285342 Ddes_1639 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480216.1 1971089 R 525146 CDS YP_002480217.1 220904905 7285343 complement(1971469..1972062) 1 NC_011883.1 KEGG: dvl:Dvul_2819 putative lipoprotein; putative lipoprotein 1972062 7285343 Ddes_1640 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative lipoprotein YP_002480217.1 1971469 R 525146 CDS YP_002480218.1 220904906 7285344 complement(1972076..1973140) 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2818 hypothetical protein; hypothetical protein 1973140 7285344 Ddes_1641 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480218.1 1972076 R 525146 CDS YP_002480219.1 220904907 7285345 complement(1973151..1973453) 1 NC_011883.1 KEGG: dvl:Dvul_2817 hypothetical protein; hypothetical protein 1973453 7285345 Ddes_1642 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480219.1 1973151 R 525146 CDS YP_002480220.1 220904908 7285346 1973699..1976656 1 NC_011883.1 PFAM: sigma-54 factor interaction domain-containing protein; histidine kinase HAMP region domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvu:DVU0151 HAMP domain/sigma-54 interaction domain-containing protein; sigma 54 interacting domain-containing protein 1976656 7285346 Ddes_1643 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sigma 54 interacting domain-containing protein YP_002480220.1 1973699 D 525146 CDS YP_002480221.1 220904909 7285347 1976692..1979253 1 NC_011883.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dvl:Dvul_2815 pyruvate, water dikinase; pyruvate phosphate dikinase 1979253 7285347 Ddes_1644 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyruvate phosphate dikinase YP_002480221.1 1976692 D 525146 CDS YP_002480222.1 220904910 7285348 1979324..1980586 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: sfu:Sfum_2013 major facilitator superfamily MFS_1; major facilitator superfamily protein 1980586 7285348 Ddes_1645 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002480222.1 1979324 D 525146 CDS YP_002480223.1 220904911 7285349 1980898..1981527 1 NC_011883.1 SMART: Rhodanese domain protein; KEGG: rba:RB11225 hypothetical protein; rhodanese domain-containing protein 1981527 7285349 Ddes_1646 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rhodanese domain-containing protein YP_002480223.1 1980898 D 525146 CDS YP_002480224.1 220904912 7285350 1981686..1982555 1 NC_011883.1 PFAM: beta-lactamase domain protein; KEGG: reh:H16_A1980 hydroxyacylglutathione hydrolase; beta-lactamase domain-containing protein 1982555 7285350 Ddes_1647 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-lactamase domain-containing protein YP_002480224.1 1981686 D 525146 CDS YP_002480225.1 220904913 7285351 1982715..1983221 1 NC_011883.1 PFAM: membrane protein of unknown function UCP014873; KEGG: lip:LI0059 hypothetical protein; hypothetical protein 1983221 7285351 Ddes_1648 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480225.1 1982715 D 525146 CDS YP_002480226.1 220904914 7285352 1983925..1985022 1 NC_011883.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rru:Rru_A0144 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1985022 7285352 Ddes_1649 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH:flavin oxidoreductase YP_002480226.1 1983925 D 525146 CDS YP_002480227.1 220904915 7285353 1985402..1987678 1 NC_011883.1 KEGG: ypy:YPK_3070 hypothetical protein; hypothetical protein 1987678 7285353 Ddes_1650 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480227.1 1985402 D 525146 CDS YP_002480228.1 220904916 7285354 1987671..1988273 1 NC_011883.1 KEGG: sfu:Sfum_2049 hypothetical protein; hypothetical protein 1988273 7285354 Ddes_1651 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480228.1 1987671 D 525146 CDS YP_002480229.1 220904917 7285355 complement(1988384..1988692) 1 NC_011883.1 KEGG: pca:Pcar_0858 hypothetical protein; hypothetical protein 1988692 7285355 Ddes_1652 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480229.1 1988384 R 525146 CDS YP_002480230.1 220904918 7285356 complement(1988967..1989509) 1 NC_011883.1 KEGG: dvl:Dvul_2727 hypothetical protein; hypothetical protein 1989509 7285356 Ddes_1653 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480230.1 1988967 R 525146 CDS YP_002480231.1 220904919 7285357 complement(1989812..1991062) 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2726 hypothetical protein; hypothetical protein 1991062 7285357 Ddes_1654 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480231.1 1989812 R 525146 CDS YP_002480232.1 220904920 7285358 complement(1991142..1992659) 1 NC_011883.1 KEGG: mgm:Mmc1_3622 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 1992659 7285358 Ddes_1655 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 proton-translocating NADH-quinone oxidoreductase subunit N YP_002480232.1 1991142 R 525146 CDS YP_002480233.1 220904921 7285359 complement(1992682..1994169) 1 NC_011883.1 KEGG: tye:THEYE_A0920 NADH-quinone oxidoreductase chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1994169 7285359 Ddes_1656 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 proton-translocating NADH-quinone oxidoreductase subunit M YP_002480233.1 1992682 R 525146 CDS YP_002480234.1 220904922 7285360 complement(1994188..1996116) 1 NC_011883.1 KEGG: tye:THEYE_A0919 NADH-quinone oxidoreductase chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 1996116 7285360 Ddes_1657 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 proton-translocating NADH-quinone oxidoreductase subunit L YP_002480234.1 1994188 R 525146 CDS YP_002480235.1 220904923 7285361 complement(1996119..1996421) 1 NC_011883.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ret:RHE_CH03730 NADH-ubiquinone oxidoreductase chain K protein; NADH-ubiquinone oxidoreductase chain 4L 1996421 7285361 Ddes_1658 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH-ubiquinone oxidoreductase chain 4L YP_002480235.1 1996119 R 525146 CDS YP_002480236.1 220904924 7285362 complement(1996418..1997062) 1 NC_011883.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: tye:THEYE_A1120 NADH-quinone oxidoreductase chain J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1997062 7285362 Ddes_1659 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_002480236.1 1996418 R 525146 CDS YP_002480237.1 220904925 7285363 complement(1997168..1997872) 1 NC_011883.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tye:THEYE_A1124 NADH-quinone oxidoreductase, chain I subfamily, putative; NADH-quinone oxidoreductase subunit I 1997872 7285363 Ddes_1660 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH-quinone oxidoreductase subunit I YP_002480237.1 1997168 R 525146 CDS YP_002480238.1 220904926 7285364 complement(1997930..1998898) 1 NC_011883.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: tye:THEYE_A0915 NADH-quinone oxidoreductase chain H; NADH dehydrogenase (quinone) 1998898 7285364 Ddes_1661 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (quinone) YP_002480238.1 1997930 R 525146 CDS YP_002480239.1 220904927 7285365 complement(1998980..2000131) 1 NC_011883.1 KEGG: tye:THEYE_A0914 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D 2000131 7285365 Ddes_1662 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase I subunit D YP_002480239.1 1998980 R 525146 CDS YP_002480240.1 220904928 7285366 complement(2000298..2000858) 1 NC_011883.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: tye:THEYE_A1122 NADH-quinone oxidoreductase chain c 2; NADH (or F420H2) dehydrogenase subunit C 2000858 7285366 Ddes_1663 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH (or F420H2) dehydrogenase subunit C YP_002480240.1 2000298 R 525146 CDS YP_002480241.1 220904929 7285367 complement(2000840..2001391) 1 NC_011883.1 KEGG: tye:THEYE_A1126 NADH-quinone oxidoreductase chain b 2; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 2001391 7285367 Ddes_1664 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH-quinone oxidoreductase subunit B YP_002480241.1 2000840 R 525146 CDS YP_002480242.1 220904930 7285368 complement(2001379..2001753) 1 NC_011883.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gbm:Gbem_3926 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 2001753 7285368 Ddes_1665 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_002480242.1 2001379 R 525146 CDS YP_002480243.1 220904931 7285369 complement(2001909..2002415) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tye:THEYE_A1127 anaerobic dimethyl sulfoxide reductase chain B; 4Fe-4S ferredoxin 2002415 7285369 Ddes_1666 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480243.1 2001909 R 525146 CDS YP_002480244.1 220904932 7285370 complement(2002500..2004614) 1 NC_011883.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dvl:Dvul_2794 molybdopterin oxidoreductase; Formate dehydrogenase 2004614 7285370 Ddes_1667 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Formate dehydrogenase YP_002480244.1 2002500 R 525146 CDS YP_002480245.1 220904933 7285371 complement(2005802..2006203) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2506 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 2006203 7285371 Ddes_1668 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480245.1 2005802 R 525146 CDS YP_002480246.1 220904934 7285372 complement(2006207..2007289) 1 NC_011883.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dvl:Dvul_2505 NADH dehydrogenase (ubiquinone); NADH-ubiquinone oxidoreductase chain 49kDa 2007289 7285372 Ddes_1669 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH-ubiquinone oxidoreductase chain 49kDa YP_002480246.1 2006207 R 525146 CDS YP_002480247.1 220904935 7285373 complement(2007286..2007753) 1 NC_011883.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvl:Dvul_2504 ech hydrogenase, subunit EchD, putative; NADH dehydrogenase (ubiquinone) 30 kDa subunit 2007753 7285373 Ddes_1670 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_002480247.1 2007286 R 525146 CDS YP_002480248.1 220904936 7285374 complement(2007772..2008329) 1 NC_011883.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dvl:Dvul_2503 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 2008329 7285374 Ddes_1671 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002480248.1 2007772 R 525146 CDS YP_002480249.1 220904937 7285375 complement(2008342..2009193) 1 NC_011883.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dvl:Dvul_2502 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 2009193 7285375 Ddes_1672 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 respiratory-chain NADH dehydrogenase subunit 1 YP_002480249.1 2008342 R 525146 CDS YP_002480250.1 220904938 7285376 complement(2009193..2011148) 1 NC_011883.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_2501 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2011148 7285376 Ddes_1673 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (quinone) YP_002480250.1 2009193 R 525146 CDS YP_002480251.1 220904939 7285377 2011822..2013303 1 NC_011883.1 KEGG: cdf:CD2965 putative signaling protein; putative diguanylate cyclase 2013303 7285377 Ddes_1674 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative diguanylate cyclase YP_002480251.1 2011822 D 525146 CDS YP_002480252.1 220904940 7285378 2013534..2014082 1 NC_011883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1929 acetyltransferase; N-acetyltransferase GCN5 2014082 7285378 Ddes_1675 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002480252.1 2013534 D 525146 CDS YP_002480253.1 220904941 7285379 2014197..2015216 1 NC_011883.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mmw:Mmwyl1_1976 ornithine carbamoyltransferase; ornithine carbamoyltransferase 2015216 7285379 Ddes_1676 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ornithine carbamoyltransferase YP_002480253.1 2014197 D 525146 CDS YP_002480254.1 220904942 7285381 2016004..2017755 1 NC_011883.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 2017755 7285381 Ddes_1677 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 potassium-transporting ATPase A YP_002480254.1 2016004 D 525146 CDS YP_002480255.1 220904943 7285382 2017809..2019887 1 NC_011883.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cbt:CLH_0916 K+-transporting ATPase, B subunit; K+-transporting ATPase subunit B 2019887 7285382 Ddes_1678 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 K+-transporting ATPase subunit B YP_002480255.1 2017809 D 525146 CDS YP_002480256.1 220904944 7285383 2019897..2020553 1 NC_011883.1 PFAM: K transporting ATPase KdpC subunit; KEGG: cbt:CLH_0917 K+-transporting ATPase, C subunit; Potassium-transporting ATPase 2020553 7285383 Ddes_1679 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Potassium-transporting ATPase YP_002480256.1 2019897 D 525146 CDS YP_002480257.1 220904945 7285384 2020588..2023473 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; KEGG: ckl:CKL_1469 hypothetical protein; osmosensitive K+ channel signal transduction histidine kinase 2023473 7285384 Ddes_1680 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 osmosensitive K+ channel signal transduction histidine kinase YP_002480257.1 2020588 D 525146 CDS YP_002480258.1 220904946 7285385 2023476..2024219 1 NC_011883.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbt:CLH_0919 KDP operon transcriptional regulatory protein KdpE; winged helix family two component transcriptional regulator 2024219 7285385 Ddes_1681 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 winged helix family two component transcriptional regulator YP_002480258.1 2023476 D 525146 CDS YP_002480259.1 220904947 7285387 2026759..2027553 1 NC_011883.1 PFAM: inositol monophosphatase; KEGG: smd:Smed_5476 histidinol-phosphate phosphatase, putative; inositol-phosphate phosphatase 2027553 7285387 Ddes_1683 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inositol-phosphate phosphatase YP_002480259.1 2026759 D 525146 CDS YP_002480260.1 220904948 7285388 2027589..2028857 1 NC_011883.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: spe:Spro_0134 regulatory protein UhpC; major facilitator superfamily protein 2028857 7285388 Ddes_1684 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002480260.1 2027589 D 525146 CDS YP_002480261.1 220904949 7285389 2029043..2029930 1 NC_011883.1 PFAM: dihydrodipicolinate synthetase; KEGG: rle:RL4484 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase 2029930 7285389 Ddes_1685 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydrodipicolinate synthetase YP_002480261.1 2029043 D 525146 CDS YP_002480262.1 220904950 7285390 2030005..2031210 1 NC_011883.1 PFAM: FAD dependent oxidoreductase; KEGG: bce:BC2836 sarcosine oxidase beta subunit; FAD dependent oxidoreductase 2031210 7285390 Ddes_1686 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD dependent oxidoreductase YP_002480262.1 2030005 D 525146 CDS YP_002480263.1 220904951 7285391 2031222..2031530 1 NC_011883.1 KEGG: dps:DP2247 hypothetical protein; hypothetical protein 2031530 7285391 Ddes_1687 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480263.1 2031222 D 525146 CDS YP_002480264.1 220904952 7285392 2031523..2032911 1 NC_011883.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cti:RALTA_B1296 opine oxidase subunit A; pyridine nucleotide-disulphide oxidoreductase; BFD (2Fe-2S)-binding domain-containing protein 2032911 7285392 Ddes_1688 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 BFD (2Fe-2S)-binding domain-containing protein YP_002480264.1 2031523 D 525146 CDS YP_002480265.1 220904953 7285393 2033094..2034596 1 NC_011883.1 PFAM: Aldehyde Dehydrogenase; KEGG: bph:Bphy_6864 aldehyde dehydrogenase; aldehyde dehydrogenase 2034596 7285393 Ddes_1689 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aldehyde dehydrogenase YP_002480265.1 2033094 D 525146 CDS YP_002480266.1 220904954 7285394 2034668..2035675 1 NC_011883.1 PFAM: proline racemase; KEGG: cdf:CD3237 putative proline racemase; proline racemase 2035675 7285394 Ddes_1690 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 proline racemase YP_002480266.1 2034668 D 525146 CDS YP_002480267.1 220904955 7285395 2035856..2037424 1 NC_011883.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1836 amino acid permease-associated region; amino acid permease-associated protein 2037424 7285395 Ddes_1691 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid permease-associated protein YP_002480267.1 2035856 D 525146 CDS YP_002480268.1 220904956 7285402 complement(2043378..2043980) 1 NC_011883.1 KEGG: gsu:GSU1208 hypothetical protein; hypothetical protein 2043980 7285402 Ddes_1692 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480268.1 2043378 R 525146 CDS YP_002480269.1 220904957 7285403 complement(2044016..2045575) 1 NC_011883.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 2045575 7285403 Ddes_1693 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphodiesterase YP_002480269.1 2044016 R 525146 CDS YP_002480270.1 220904958 7285405 complement(2045990..2046262) 1 NC_011883.1 KEGG: dvl:Dvul_0586 hypothetical protein; hypothetical protein 2046262 7285405 Ddes_1694 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480270.1 2045990 R 525146 CDS YP_002480271.1 220904959 7285406 complement(2046269..2046514) 1 NC_011883.1 KEGG: dvl:Dvul_0587 hypothetical protein; hypothetical protein 2046514 7285406 Ddes_1695 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480271.1 2046269 R 525146 CDS YP_002480272.1 220904960 7285407 complement(2046769..2048124) 1 NC_011883.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 2048124 glmU 7285407 glmU Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_002480272.1 2046769 R 525146 CDS YP_002480273.1 220904961 7285408 complement(2048365..2049465) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: ana:alr3062 probable glycosyl transferase; family 2 glycosyl transferase 2049465 7285408 Ddes_1697 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002480273.1 2048365 R 525146 CDS YP_002480274.1 220904962 7285409 complement(2049814..2050224) 1 NC_011883.1 PFAM: OsmC family protein; KEGG: fjo:Fjoh_2380 OsmC family protein; OsmC family protein 2050224 7285409 Ddes_1698 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 OsmC family protein YP_002480274.1 2049814 R 525146 CDS YP_002480275.1 220904963 7285410 complement(2050301..2050882) 1 NC_011883.1 PFAM: protein of unknown function DUF204; KEGG: dvl:Dvul_0455 hypothetical protein; hypothetical protein 2050882 7285410 Ddes_1699 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480275.1 2050301 R 525146 CDS YP_002480276.1 220904964 7285411 2051140..2052219 1 NC_011883.1 hypothetical protein 2052219 7285411 Ddes_1700 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480276.1 2051140 D 525146 CDS YP_002480277.1 220904965 7285412 2052285..2052824 1 NC_011883.1 hypothetical protein 2052824 7285412 Ddes_1701 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480277.1 2052285 D 525146 CDS YP_002480278.1 220904966 7285413 2053262..2053429 1 NC_011883.1 hypothetical protein 2053429 7285413 Ddes_1702 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480278.1 2053262 D 525146 CDS YP_002480279.1 220904967 7285414 2053680..2056376 1 NC_011883.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pap:PSPA7_5544 magnesium ABC transporter ATPase; magnesium-translocating P-type ATPase 2056376 7285414 Ddes_1703 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 magnesium-translocating P-type ATPase YP_002480279.1 2053680 D 525146 CDS YP_002480280.1 220904968 7285415 complement(2056583..2056930) 1 NC_011883.1 KEGG: dvl:Dvul_2198 hypothetical protein; hypothetical protein 2056930 7285415 Ddes_1704 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480280.1 2056583 R 525146 CDS YP_002480281.1 220904969 7285416 2057212..2058834 1 NC_011883.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pnu:Pnuc_1088 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate domain-containing TPP-binding protein 2058834 7285416 Ddes_1705 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine pyrophosphate domain-containing TPP-binding protein YP_002480281.1 2057212 D 525146 CDS YP_002480282.1 220904970 7285417 2058897..2059841 1 NC_011883.1 PFAM: Auxin Efflux Carrier; KEGG: lip:LI0107 permease; auxin efflux carrier 2059841 7285417 Ddes_1706 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 auxin efflux carrier YP_002480282.1 2058897 D 525146 CDS YP_002480283.1 220904971 7285418 complement(2060137..2062884) 1 NC_011883.1 KEGG: lip:LI0837 hypothetical protein; hypothetical protein 2062884 7285418 Ddes_1707 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480283.1 2060137 R 525146 CDS YP_002480284.1 220904972 7285419 2062971..2063336 1 NC_011883.1 KEGG: dvl:Dvul_1026 hypothetical protein; hypothetical protein 2063336 7285419 Ddes_1708 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480284.1 2062971 D 525146 CDS YP_002480285.1 220904973 7285420 2063734..2066310 1 NC_011883.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2066310 7285420 Ddes_1709 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 preprotein translocase subunit SecA YP_002480285.1 2063734 D 525146 CDS YP_002480286.1 220904974 7285421 complement(2066733..2068025) 1 NC_011883.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: dvl:Dvul_1804 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 2068025 7285421 Ddes_1710 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aromatic hydrocarbon degradation membrane protein YP_002480286.1 2066733 R 525146 CDS YP_002480287.1 220904975 7285422 complement(2068214..2070598) 1 NC_011883.1 KEGG: dvu:DVU1284 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' 2070598 7285422 Ddes_1711 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 primosomal protein N' YP_002480287.1 2068214 R 525146 CDS YP_002480288.1 220904976 7285423 complement(2070797..2071669) 1 NC_011883.1 PFAM: Nucleotidyl transferase; KEGG: dvl:Dvul_1782 UTP-glucose-1-phosphate uridylyltransferase GalU; nucleotidyl transferase 2071669 7285423 Ddes_1712 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nucleotidyl transferase YP_002480288.1 2070797 R 525146 CDS YP_002480289.1 220904977 7285424 complement(2071735..2073087) 1 NC_011883.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 2073087 glmM 7285424 glmM Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoglucosamine mutase YP_002480289.1 2071735 R 525146 CDS YP_002480290.1 220904978 7285425 complement(2073147..2074079) 1 NC_011883.1 PFAM: YbbR family protein; KEGG: dvl:Dvul_1784 YbbR family protein; hypothetical protein 2074079 7285425 Ddes_1714 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480290.1 2073147 R 525146 CDS YP_002480291.1 220904979 7285426 complement(2074066..2074905) 1 NC_011883.1 PFAM: protein of unknown function DUF147; KEGG: dvl:Dvul_1785 hypothetical protein; hypothetical protein 2074905 7285426 Ddes_1715 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480291.1 2074066 R 525146 CDS YP_002480292.1 220904980 7285427 complement(2075280..2076182) 1 NC_011883.1 KEGG: dvl:Dvul_1786 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 2076182 7285427 Ddes_1716 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydropteroate synthase YP_002480292.1 2075280 R 525146 CDS YP_002480293.1 220904981 7285428 complement(2076182..2078212) 1 NC_011883.1 KEGG: dvl:Dvul_1787 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 2078212 7285428 Ddes_1717 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-dependent metalloprotease FtsH YP_002480293.1 2076182 R 525146 CDS YP_002480294.1 220904982 7285430 complement(2078752..2079936) 1 NC_011883.1 KEGG: dvu:DVU2801 hypothetical protein; hypothetical protein 2079936 7285430 Ddes_1718 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480294.1 2078752 R 525146 CDS YP_002480295.1 220904983 7285431 2080268..2080912 1 NC_011883.1 PFAM: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4447 GntR family transcriptional regulator; GntR family transcriptional regulator 2080912 7285431 Ddes_1719 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GntR family transcriptional regulator YP_002480295.1 2080268 D 525146 CDS YP_002480296.1 220904984 7285432 2080909..2081220 1 NC_011883.1 hypothetical protein 2081220 7285432 Ddes_1720 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480296.1 2080909 D 525146 CDS YP_002480297.1 220904985 7285433 2081254..2082657 1 NC_011883.1 KEGG: dvl:Dvul_0510 amino acid transporter, AAT family; amino acid transporter 2082657 7285433 Ddes_1721 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amino acid transporter YP_002480297.1 2081254 D 525146 CDS YP_002480298.1 220904986 7285434 2082677..2083825 1 NC_011883.1 KEGG: sfu:Sfum_3609 metallo-beta-lactamase family protein; metallo-beta-lactamase family protein 2083825 7285434 Ddes_1722 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metallo-beta-lactamase family protein YP_002480298.1 2082677 D 525146 CDS YP_002480299.1 220904987 7285435 2083915..2085762 1 NC_011883.1 PFAM: cobalamin synthesis protein P47K; KEGG: sfu:Sfum_3612 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 2085762 7285435 Ddes_1723 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobalamin synthesis protein P47K YP_002480299.1 2083915 D 525146 CDS YP_002480300.1 220904988 7285436 complement(2086446..2086640) 1 NC_011883.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dvl:Dvul_1701 twin arginine-targeting protein translocase; twin-arginine translocation protein, TatA/E family subunit 2086640 7285436 Ddes_1724 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 twin-arginine translocation protein, TatA/E family subunit YP_002480300.1 2086446 R 525146 CDS YP_002480301.1 220904989 7285437 2086897..2088684 1 NC_011883.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dvl:Dvul_0079 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase 2088684 7285437 Ddes_1725 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DEAD/DEAH box helicase YP_002480301.1 2086897 D 525146 CDS YP_002480302.1 220904990 7285438 2089311..2090183 1 NC_011883.1 TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cch:Cag_0412 putative molybdenum utilization protein ModD; modD protein 2090183 7285438 Ddes_1726 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 modD protein YP_002480302.1 2089311 D 525146 CDS YP_002480303.1 220904991 7285439 complement(2090290..2090784) 1 NC_011883.1 hypothetical protein 2090784 7285439 Ddes_1727 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480303.1 2090290 R 525146 CDS YP_002480304.1 220904992 7285440 complement(2090803..2092248) 1 NC_011883.1 KEGG: bac:BamMC406_6510 hypothetical protein; hypothetical protein 2092248 7285440 Ddes_1728 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480304.1 2090803 R 525146 CDS YP_002480305.1 220904993 7285441 complement(2092251..2093243) 1 NC_011883.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: pca:Pcar_0522 ATPase, AAA superfamily; ATPase 2093243 7285441 Ddes_1729 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATPase YP_002480305.1 2092251 R 525146 CDS YP_002480306.1 220904994 7285442 complement(2093445..2096369) 1 NC_011883.1 PFAM: GGDEF domain containing protein; TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0546 diguanylate cyclase; diguanylate cyclase and serine/threonine protein kinase with TPR repeats 2096369 7285442 Ddes_1730 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase and serine/threonine protein kinase with TPR repeats YP_002480306.1 2093445 R 525146 CDS YP_002480307.1 220904995 7285443 2096783..2097409 1 NC_011883.1 PFAM: beta-lactamase domain protein; KEGG: dvl:Dvul_0544 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 2097409 7285443 Ddes_1731 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-lactamase domain-containing protein YP_002480307.1 2096783 D 525146 CDS YP_002480308.1 220904996 7285444 2097406..2098101 1 NC_011883.1 PFAM: NADPH-dependent FMN reductase; KEGG: dvu:DVU2767 iron-sulfur flavoprotein, putative; NADPH-dependent FMN reductase 2098101 7285444 Ddes_1732 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADPH-dependent FMN reductase YP_002480308.1 2097406 D 525146 CDS YP_002480309.1 220904997 7285445 2098129..2099028 1 NC_011883.1 KEGG: dvu:DVU2768 ComF family protein; ComF family protein 2099028 7285445 Ddes_1733 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ComF family protein YP_002480309.1 2098129 D 525146 CDS YP_002480310.1 220904998 7285446 2099174..2100313 1 NC_011883.1 KEGG: dvl:Dvul_0540 hypothetical protein; hypothetical protein 2100313 7285446 Ddes_1734 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480310.1 2099174 D 525146 CDS YP_002480311.1 220904999 7285447 2100386..2101222 1 NC_011883.1 PFAM: DNA polymerase beta domain protein region; KEGG: smd:Smed_5877 streptomycin 3''-adenylyltransferase; adenylyltransferase 2101222 7285447 Ddes_1735 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylyltransferase YP_002480311.1 2100386 D 525146 CDS YP_002480312.1 220905000 7285448 2101636..2102562 1 NC_011883.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: dvl:Dvul_0538 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 2102562 7285448 Ddes_1736 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 import inner membrane translocase subunit Tim44 YP_002480312.1 2101636 D 525146 CDS YP_002480313.1 220905001 7285449 2102655..2103050 1 NC_011883.1 PFAM: thioesterase superfamily protein; KEGG: dvl:Dvul_2351 hypothetical protein; thioesterase superfamily protein 2103050 7285449 Ddes_1737 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thioesterase superfamily protein YP_002480313.1 2102655 D 525146 CDS YP_002480314.1 220905002 7285450 2103612..2103878 1 NC_011883.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: kpe:KPK_3736 C4-type zinc finger protein, DksA/TraR family; hypothetical protein 2103878 7285450 Ddes_1738 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480314.1 2103612 D 525146 CDS YP_002480315.1 220905003 7285451 2103981..2105315 1 NC_011883.1 KEGG: lip:LI0131 folylpolyglutamate synthase; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2105315 7285451 Ddes_1739 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_002480315.1 2103981 D 525146 CDS YP_002480316.1 220905004 7285452 2105308..2106735 1 NC_011883.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 2106735 7285452 Ddes_1740 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 selenocysteine synthase YP_002480316.1 2105308 D 525146 CDS YP_002480317.1 220905005 7285453 2106796..2108181 1 NC_011883.1 catalyzes the removal of amino acids from the N termini of peptides; putative aminopeptidase 2108181 7285453 Ddes_1741 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative aminopeptidase YP_002480317.1 2106796 D 525146 CDS YP_002480318.1 220905006 7285454 2108428..2109198 1 NC_011883.1 KEGG: gbe:GbCGDNIH1_1303 hypothetical protein; hypothetical protein 2109198 7285454 Ddes_1742 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480318.1 2108428 D 525146 CDS YP_002480319.1 220905007 7285455 complement(2109406..2110647) 1 NC_011883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_1485 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2110647 7285455 Ddes_1743 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002480319.1 2109406 R 525146 CDS YP_002480320.1 220905008 7285456 complement(2111104..2111964) 1 NC_011883.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dvl:Dvul_2305 phosphotransferase domain-containing protein; PHP domain-containing protein 2111964 7285456 Ddes_1744 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PHP domain-containing protein YP_002480320.1 2111104 R 525146 CDS YP_002480321.1 220905009 7285457 2112098..2112319 1 NC_011883.1 PFAM: protein of unknown function DUF343; KEGG: dvu:DVU0656 hypothetical protein; hypothetical protein 2112319 7285457 Ddes_1745 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480321.1 2112098 D 525146 CDS YP_002480322.1 220905010 7285458 2112319..2112885 1 NC_011883.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: dvl:Dvul_2300 phosphodiesterase; phosphodiesterase 2112885 7285458 Ddes_1746 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphodiesterase YP_002480322.1 2112319 D 525146 CDS YP_002480323.1 220905011 7285459 2112931..2113662 1 NC_011883.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2113662 7285459 Ddes_1747 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Maf-like protein YP_002480323.1 2112931 D 525146 CDS YP_002480324.1 220905012 7285460 2114466..2116514 1 NC_011883.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: dvl:Dvul_0401 acetate--CoA ligase; acetate/CoA ligase 2116514 7285460 Ddes_1748 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetate/CoA ligase YP_002480324.1 2114466 D 525146 CDS YP_002480325.1 220905013 7285461 complement(2116652..2117221) 1 NC_011883.1 hypothetical protein 2117221 7285461 Ddes_1749 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480325.1 2116652 R 525146 CDS YP_002480326.1 220905014 7285462 2117436..2117684 1 NC_011883.1 PFAM: FeoA family protein; KEGG: dvl:Dvul_0674 FeoA family protein; FeoA family protein 2117684 7285462 Ddes_1750 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FeoA family protein YP_002480326.1 2117436 D 525146 CDS YP_002480327.1 220905015 7285463 2117971..2118225 1 NC_011883.1 KEGG: dvl:Dvul_0061 hypothetical protein; hypothetical protein 2118225 7285463 Ddes_1751 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480327.1 2117971 D 525146 CDS YP_002480328.1 220905016 7285464 2118437..2120593 1 NC_011883.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dvl:Dvul_0060 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2120593 7285464 Ddes_1752 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heavy metal translocating P-type ATPase YP_002480328.1 2118437 D 525146 CDS YP_002480329.1 220905017 7285465 2120571..2120858 1 NC_011883.1 KEGG: dvl:Dvul_0059 hypothetical protein; hypothetical protein 2120858 7285465 Ddes_1753 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480329.1 2120571 D 525146 CDS YP_002480330.1 220905018 7285466 2120983..2121300 1 NC_011883.1 hypothetical protein 2121300 7285466 Ddes_1754 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480330.1 2120983 D 525146 CDS YP_002480331.1 220905019 7285468 complement(2122334..2123494) 1 NC_011883.1 PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A3715 hypothetical protein; glycosyl transferase family protein 2123494 7285468 Ddes_1756 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycosyl transferase family protein YP_002480331.1 2122334 R 525146 CDS YP_002480332.1 220905020 7285469 complement(2123494..2124894) 1 NC_011883.1 KEGG: dvu:DVU0281 exopolysaccharide biosynthesis protein, putative; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP 2124894 7285469 Ddes_1757 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Undecaprenyl-phosphate galactose phosphotransferase, WbaP YP_002480332.1 2123494 R 525146 CDS YP_002480333.1 220905021 7285470 2125265..2126008 1 NC_011883.1 PFAM: extracellular solute-binding protein family 3; KEGG: dvl:Dvul_2548 extracellular solute-binding protein; family 3 extracellular solute-binding protein 2126008 7285470 Ddes_1758 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 3 extracellular solute-binding protein YP_002480333.1 2125265 D 525146 CDS YP_002480334.1 220905022 7285471 2126099..2126791 1 NC_011883.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2547 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 2126791 7285471 Ddes_1759 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polar amino acid ABC transporter inner membrane subunit YP_002480334.1 2126099 D 525146 CDS YP_002480335.1 220905023 7285472 2126795..2127553 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_2546 ABC transporter related; ABC transporter-like protein 2127553 7285472 Ddes_1760 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480335.1 2126795 D 525146 CDS YP_002480336.1 220905024 7285473 2127555..2128223 1 NC_011883.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2545 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 2128223 7285473 Ddes_1761 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polar amino acid ABC transporter inner membrane subunit YP_002480336.1 2127555 D 525146 CDS YP_002480337.1 220905025 7285474 2128456..2131554 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cdf:CD0522 putative signaling protein; diguanylate cyclase/phosphodiesterase 2131554 7285474 Ddes_1762 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase/phosphodiesterase YP_002480337.1 2128456 D 525146 CDS YP_002480338.1 220905026 7285475 complement(2131924..2133462) 1 NC_011883.1 TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cvi:CV_3093 threonine dehydratase; threonine dehydratase, biosynthetic 2133462 7285475 Ddes_1763 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 threonine dehydratase, biosynthetic YP_002480338.1 2131924 R 525146 CDS YP_002480339.1 220905027 7285476 2133663..2134361 1 NC_011883.1 KEGG: dvl:Dvul_0475 hypothetical protein; hypothetical protein 2134361 7285476 Ddes_1764 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480339.1 2133663 D 525146 CDS YP_002480340.1 220905028 7285477 2134430..2134846 1 NC_011883.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 2134846 7285477 Ddes_1765 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nickel responsive regulator YP_002480340.1 2134430 D 525146 CDS YP_002480341.1 220905029 7285478 2134846..2135628 1 NC_011883.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 2135628 7285478 Ddes_1766 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative GTP cyclohydrolase YP_002480341.1 2134846 D 525146 CDS YP_002480342.1 220905030 7285479 2135770..2136171 1 NC_011883.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: dvu:DVU2893 flagellar basal-body rod protein, putative; hypothetical protein 2136171 7285479 Ddes_1767 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480342.1 2135770 D 525146 CDS YP_002480343.1 220905031 7285480 2136309..2137286 1 NC_011883.1 PFAM: NLP/P60 protein; KEGG: pol:Bpro_2667 peptidace C40 NLP/P60; NLP/P60 protein 2137286 7285480 Ddes_1768 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NLP/P60 protein YP_002480343.1 2136309 D 525146 CDS YP_002480344.1 220905032 7285481 2137606..2138601 1 NC_011883.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: dvl:Dvul_1396 glutamyl-tRNA synthetase, class Ic; glutamyl-tRNA synthetase 2138601 7285481 Ddes_1769 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamyl-tRNA synthetase YP_002480344.1 2137606 D 525146 CDS YP_002480345.1 220905033 7285482 2138646..2139098 1 NC_011883.1 KEGG: dps:DP2880 hypothetical protein; hypothetical protein 2139098 7285482 Ddes_1770 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480345.1 2138646 D 525146 CDS YP_002480346.1 220905034 7285484 2139372..2140652 1 NC_011883.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sfu:Sfum_1700 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 2140652 7285484 Ddes_1771 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdenum cofactor synthesis domain-containing protein YP_002480346.1 2139372 D 525146 CDS YP_002480347.1 220905035 7285485 2140685..2142634 1 NC_011883.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sfu:Sfum_0615 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 2142634 7285485 Ddes_1772 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdenum cofactor synthesis domain-containing protein YP_002480347.1 2140685 D 525146 CDS YP_002480348.1 220905036 7285486 complement(2142773..2143828) 1 NC_011883.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sfu:Sfum_2082 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 2143828 7285486 Ddes_1773 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UBA/THIF-type NAD/FAD binding protein YP_002480348.1 2142773 R 525146 CDS YP_002480349.1 220905037 7285487 complement(2143842..2144081) 1 NC_011883.1 PFAM: thiamineS protein; KEGG: sfu:Sfum_1283 hypothetical protein; sulfur transfer protein ThiS 2144081 7285487 Ddes_1774 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfur transfer protein ThiS YP_002480349.1 2143842 R 525146 CDS YP_002480350.1 220905038 7285488 complement(2144312..2146051) 1 NC_011883.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: sfu:Sfum_4079 aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 2146051 7285488 Ddes_1775 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aldehyde ferredoxin oxidoreductase YP_002480350.1 2144312 R 525146 CDS YP_002480351.1 220905039 7285489 complement(2146521..2147180) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU0747 ABC transporter, ATP-binding protein; ABC transporter-like protein 2147180 7285489 Ddes_1776 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480351.1 2146521 R 525146 CDS YP_002480352.1 220905040 7285490 complement(2147177..2147872) 1 NC_011883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2224 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2147872 7285490 Ddes_1777 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 binding-protein-dependent transport system inner membrane protein YP_002480352.1 2147177 R 525146 CDS YP_002480353.1 220905041 7285491 complement(2147982..2148809) 1 NC_011883.1 KEGG: dvu:DVU0745 ABC transporter, periplasmic substrate-binding protein; ABC transporter periplasmic substrate-binding protein 2148809 7285491 Ddes_1778 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter periplasmic substrate-binding protein YP_002480353.1 2147982 R 525146 CDS YP_002480354.1 220905042 7285492 2148991..2149131 1 NC_011883.1 hypothetical protein 2149131 7285492 Ddes_1779 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480354.1 2148991 D 525146 CDS YP_002480355.1 220905043 7285493 complement(2149184..2150191) 1 NC_011883.1 PFAM: TOBE domain protein; KEGG: dvl:Dvul_2790 TOBE domain-containing protein; TOBE domain-containing protein 2150191 7285493 Ddes_1780 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TOBE domain-containing protein YP_002480355.1 2149184 R 525146 CDS YP_002480356.1 220905044 7285494 complement(2150206..2151321) 1 NC_011883.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cbt:CLH_2710 putative transcriptional regulator; LacI family transcriptional regulator 2151321 7285494 Ddes_1781 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 LacI family transcriptional regulator YP_002480356.1 2150206 R 525146 CDS YP_002480357.1 220905045 7285495 2151709..2153082 1 NC_011883.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cti:RALTA_B1542 shikimate and dehydroshikimate transport protein (putative); MFS family transporter; major facilitator superfamily protein 2153082 7285495 Ddes_1782 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002480357.1 2151709 D 525146 CDS YP_002480358.1 220905046 7285496 2153085..2153915 1 NC_011883.1 PFAM: metallophosphoesterase; KEGG: pst:PSPTO_0490 Ser/Thr protein phosphatase family protein; metallophosphoesterase 2153915 7285496 Ddes_1783 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metallophosphoesterase YP_002480358.1 2153085 D 525146 CDS YP_002480359.1 220905047 7285497 complement(2154248..2154943) 1 NC_011883.1 hypothetical protein 2154943 7285497 Ddes_1784 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480359.1 2154248 R 525146 CDS YP_002480360.1 220905048 7285498 2155325..2157388 1 NC_011883.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2157388 7285498 Ddes_1785 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 elongation factor G YP_002480360.1 2155325 D 525146 CDS YP_002480361.1 220905049 7285499 2158061..2158309 1 NC_011883.1 PFAM: helix-turn-helix domain protein; KEGG: xfa:XF1720 hypothetical protein; XRE family transcriptional regulator 2158309 7285499 Ddes_1786 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002480361.1 2158061 D 525146 CDS YP_002480362.1 220905050 7285500 2158687..2161377 1 NC_011883.1 KEGG: sfu:Sfum_1859 hypothetical protein; hypothetical protein 2161377 7285500 Ddes_1787 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480362.1 2158687 D 525146 CDS YP_002480363.1 220905051 7285501 2161385..2162467 1 NC_011883.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: sma:SAV_3193 phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 2162467 7285501 Ddes_1788 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4'-phosphopantetheinyl transferase YP_002480363.1 2161385 D 525146 CDS YP_002480364.1 220905052 7285502 2162570..2163877 1 NC_011883.1 KEGG: dvl:Dvul_2145 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 2163877 7285502 Ddes_1789 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA (guanine-N1)-methyltransferase YP_002480364.1 2162570 D 525146 CDS YP_002480365.1 220905053 7285503 2163954..2164301 1 NC_011883.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2164301 rplS 7285503 rplS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L19 YP_002480365.1 2163954 D 525146 CDS YP_002480366.1 220905054 7285504 2165044..2165736 1 NC_011883.1 PFAM: ribonuclease HII/HIII; KEGG: dvl:Dvul_2147 ribonuclease H; Ribonuclease H 2165736 7285504 Ddes_1791 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ribonuclease H YP_002480366.1 2165044 D 525146 CDS YP_002480367.1 220905055 7285505 2165802..2166284 1 NC_011883.1 PFAM: protein of unknown function UPF0102; KEGG: dvl:Dvul_2148 hypothetical protein; hypothetical protein 2166284 7285505 Ddes_1792 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480367.1 2165802 D 525146 CDS YP_002480368.1 220905056 7285506 2166226..2167077 1 NC_011883.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvl:Dvul_2149 uroporphyrin-III C/tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 2167077 7285506 Ddes_1793 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002480368.1 2166226 D 525146 CDS YP_002480369.1 220905057 7285507 2167186..2167935 1 NC_011883.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: dvl:Dvul_2150 PTS system mannose/fructose/sorbose family IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 2167935 7285507 Ddes_1794 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PTS system mannose/fructose/sorbose family transporter subunit IID YP_002480369.1 2167186 D 525146 CDS YP_002480370.1 220905058 7285508 2167937..2168335 1 NC_011883.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: dvl:Dvul_2151 phosphotransferase system, phosphocarrier protein HPr; HPr family phosphocarrier protein 2168335 7285508 Ddes_1795 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HPr family phosphocarrier protein YP_002480370.1 2167937 D 525146 CDS YP_002480371.1 220905059 7285509 2168337..2170109 1 NC_011883.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: dvl:Dvul_2152 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 2170109 7285509 Ddes_1796 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoenolpyruvate-protein phosphotransferase YP_002480371.1 2168337 D 525146 CDS YP_002480372.1 220905060 7285510 2170106..2170561 1 NC_011883.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2170561 smpB 7285510 smpB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SsrA-binding protein YP_002480372.1 2170106 D 525146 CDS YP_002480373.1 220905061 7285511 2170805..2173618 1 NC_011883.1 PFAM: ComEC/Rec2-related protein; KEGG: dvu:DVU3257 DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-like protein 2173618 7285511 Ddes_1798 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ComEC/Rec2-like protein YP_002480373.1 2170805 D 525146 CDS YP_002480374.1 220905062 7285512 2173895..2174545 1 NC_011883.1 PFAM: NADPH-dependent FMN reductase; KEGG: cbe:Cbei_4970 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2174545 7285512 Ddes_1799 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADPH-dependent FMN reductase YP_002480374.1 2173895 D 525146 CDS YP_002480375.1 220905063 7285513 complement(2174868..2175809) 1 NC_011883.1 KEGG: dvu:DVU3256 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase 2175809 7285513 Ddes_1800 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 formamidopyrimidine-DNA glycosylase YP_002480375.1 2174868 R 525146 CDS YP_002480376.1 220905064 7285514 complement(2175945..2176451) 1 NC_011883.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: dvl:Dvul_2144 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 2176451 7285514 Ddes_1801 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 16S rRNA processing protein RimM YP_002480376.1 2175945 R 525146 CDS YP_002480377.1 220905065 7285515 complement(2176485..2176715) 1 NC_011883.1 KEGG: dvl:Dvul_2143 hypothetical protein; hypothetical protein 2176715 7285515 Ddes_1802 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480377.1 2176485 R 525146 CDS YP_002480378.1 220905066 7285516 complement(2176871..2177110) 1 NC_011883.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2177110 rpsP 7285516 rpsP Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S16 YP_002480378.1 2176871 R 525146 CDS YP_002480379.1 220905067 7285517 complement(2177229..2178767) 1 NC_011883.1 KEGG: dvl:Dvul_2141 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 2178767 7285517 Ddes_1804 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 signal recognition particle protein YP_002480379.1 2177229 R 525146 CDS YP_002480380.1 220905068 7285518 2179124..2180581 1 NC_011883.1 KEGG: dvl:Dvul_1949 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 2180581 7285518 Ddes_1805 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inosine-5'-monophosphate dehydrogenase YP_002480380.1 2179124 D 525146 CDS YP_002480381.1 220905069 7285519 2180668..2182203 1 NC_011883.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2182203 guaA 7285519 guaA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GMP synthase YP_002480381.1 2180668 D 525146 CDS YP_002480382.1 220905070 7285520 2182213..2182794 1 NC_011883.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dvl:Dvul_1951 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 2182794 7285520 Ddes_1807 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 twin-arginine translocation protein subunit TatB YP_002480382.1 2182213 D 525146 CDS YP_002480383.1 220905071 7285521 2182791..2184197 1 NC_011883.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: dvl:Dvul_1952 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 2184197 7285521 Ddes_1808 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Sec-independent protein translocase subunit TatC YP_002480383.1 2182791 D 525146 CDS YP_002480384.1 220905072 7285522 2184194..2184790 1 NC_011883.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: dvu:DVU1040 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 2184790 7285522 Ddes_1809 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 imidazoleglycerol-phosphate dehydratase YP_002480384.1 2184194 D 525146 CDS YP_002480385.1 220905073 7285523 2184790..2185449 1 NC_011883.1 KEGG: dvl:Dvul_1954 putative lipoprotein; putative lipoprotein 2185449 7285523 Ddes_1810 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative lipoprotein YP_002480385.1 2184790 D 525146 CDS YP_002480386.1 220905074 7285524 2185446..2186198 1 NC_011883.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2186198 7285524 Ddes_1811 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002480386.1 2185446 D 525146 CDS YP_002480387.1 220905075 7285525 2186578..2187012 1 NC_011883.1 PFAM: small multidrug resistance protein; KEGG: dvu:DVU3327 SMR family multidrug efflux pump; small multidrug resistance protein 2187012 7285525 Ddes_1812 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small multidrug resistance protein YP_002480387.1 2186578 D 525146 CDS YP_002480388.1 220905076 7285526 2187012..2187350 1 NC_011883.1 PFAM: small multidrug resistance protein; KEGG: dvl:Dvul_0064 small multidrug resistance protein; small multidrug resistance protein 2187350 7285526 Ddes_1813 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small multidrug resistance protein YP_002480388.1 2187012 D 525146 CDS YP_002480389.1 220905077 7285527 2187499..2188050 1 NC_011883.1 hypothetical protein 2188050 7285527 Ddes_1814 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480389.1 2187499 D 525146 CDS YP_002480390.1 220905078 7285528 complement(2188126..2188707) 1 NC_011883.1 PFAM: Phosphoglycerate mutase; KEGG: pth:PTH_0689 fructose-2,6-bisphosphatase; phosphoglycerate mutase 2188707 7285528 Ddes_1815 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoglycerate mutase YP_002480390.1 2188126 R 525146 CDS YP_002480391.1 220905079 7285529 complement(2188885..2190156) 1 NC_011883.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: gur:Gura_1006 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2190156 7285529 Ddes_1816 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 metal dependent phosphohydrolase YP_002480391.1 2188885 R 525146 CDS YP_002480392.1 220905080 7285530 complement(2190153..2191550) 1 NC_011883.1 KEGG: pca:Pcar_0226 coenzyme F390 synthetase; coenzyme F390 synthetase 2191550 7285530 Ddes_1817 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 coenzyme F390 synthetase YP_002480392.1 2190153 R 525146 CDS YP_002480393.1 220905081 7285531 complement(2191547..2193106) 1 NC_011883.1 PFAM: Radical SAM domain protein; KEGG: pth:PTH_0684 Fe-S oxidoreductases; radical SAM protein 2193106 7285531 Ddes_1818 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002480393.1 2191547 R 525146 CDS YP_002480394.1 220905082 7285532 complement(2193103..2193567) 1 NC_011883.1 KEGG: dvl:Dvul_1578 hypothetical protein; hypothetical protein 2193567 7285532 Ddes_1819 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480394.1 2193103 R 525146 CDS YP_002480395.1 220905083 7285533 complement(2193564..2194511) 1 NC_011883.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dvl:Dvul_1577 methyltransferase type 11; type 11 methyltransferase 2194511 7285533 Ddes_1820 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 11 methyltransferase YP_002480395.1 2193564 R 525146 CDS YP_002480396.1 220905084 7285534 complement(2194508..2194723) 1 NC_011883.1 KEGG: pth:PTH_0681 hypothetical protein; hypothetical protein 2194723 7285534 Ddes_1821 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480396.1 2194508 R 525146 CDS YP_002480397.1 220905085 7285535 complement(2194720..2197128) 1 NC_011883.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dps:DP0269 Fe-S oxidoreductase; hypothetical protein 2197128 7285535 Ddes_1822 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480397.1 2194720 R 525146 CDS YP_002480398.1 220905086 7285536 complement(2197376..2200099) 1 NC_011883.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: dvl:Dvul_1574 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 2200099 7285536 Ddes_1823 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_002480398.1 2197376 R 525146 CDS YP_002480399.1 220905087 7285537 complement(2200242..2201282) 1 NC_011883.1 PFAM: molybdopterin binding domain; KEGG: dvl:Dvul_1573 molybdopterin binding domain-containing protein; molybdopterin binding domain-containing protein 2201282 7285537 Ddes_1824 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molybdopterin binding domain-containing protein YP_002480399.1 2200242 R 525146 CDS YP_002480400.1 220905088 7285538 2201586..2201969 1 NC_011883.1 KEGG: dvl:Dvul_0245 putative lipoprotein; putative lipoprotein 2201969 7285538 Ddes_1825 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative lipoprotein YP_002480400.1 2201586 D 525146 CDS YP_002480401.1 220905089 7285539 2202054..2203604 1 NC_011883.1 PFAM: polysaccharide export protein; KEGG: dvl:Dvul_0246 polysaccharide export protein; polysaccharide export protein 2203604 7285539 Ddes_1826 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polysaccharide export protein YP_002480401.1 2202054 D 525146 CDS YP_002480402.1 220905090 7285540 2203756..2204445 1 NC_011883.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: tde:TDE0478 cyclic nucleotide binding domain-containing protein; Crp/Fnr family transcriptional regulator 2204445 7285540 Ddes_1827 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Crp/Fnr family transcriptional regulator YP_002480402.1 2203756 D 525146 CDS YP_002480403.1 220905091 7285541 2204511..2204852 1 NC_011883.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cpy:Cphy_1552 cupin 2 domain-containing protein; cupin 2204852 7285541 Ddes_1828 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cupin YP_002480403.1 2204511 D 525146 CDS YP_002480404.1 220905092 7285542 2204991..2206628 1 NC_011883.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2206628 7285542 Ddes_1829 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydroxylamine reductase YP_002480404.1 2204991 D 525146 CDS YP_002480405.1 220905093 7285543 complement(2206992..2207846) 1 NC_011883.1 KEGG: rxy:Rxyl_2427 hypothetical protein; hypothetical protein 2207846 7285543 Ddes_1830 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480405.1 2206992 R 525146 CDS YP_002480406.1 220905094 7285544 complement(2207888..2209000) 1 NC_011883.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 2209000 7285544 Ddes_1831 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cyclopropane-fatty-acyl-phospholipid synthase YP_002480406.1 2207888 R 525146 CDS YP_002480407.1 220905095 7285545 complement(2209296..2209802) 1 NC_011883.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: lip:LI0734 hypothetical protein; membrane-bound metal-dependent hydrolase 2209802 7285545 Ddes_1832 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 membrane-bound metal-dependent hydrolase YP_002480407.1 2209296 R 525146 CDS YP_002480408.1 220905096 7285546 complement(2209995..2212340) 1 NC_011883.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2212340 7285546 Ddes_1833 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribonucleotide-diphosphate reductase subunit alpha YP_002480408.1 2209995 R 525146 CDS YP_002480409.1 220905097 7285547 complement(2212765..2214744) 1 NC_011883.1 KEGG: dvl:Dvul_2077 hypothetical protein; hypothetical protein 2214744 7285547 Ddes_1834 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480409.1 2212765 R 525146 CDS YP_002480410.1 220905098 7285548 complement(2214745..2216664) 1 NC_011883.1 KEGG: dvu:DVU0908 iron-sulfur cluster-binding protein, putative; iron-sulfur cluster-binding protein 2216664 7285548 Ddes_1835 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 iron-sulfur cluster-binding protein YP_002480410.1 2214745 R 525146 CDS YP_002480411.1 220905099 7285549 2216848..2217828 1 NC_011883.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: dvl:Dvul_2074 flagellar motor switch protein FliM; flagellar motor switch protein FliM 2217828 7285549 Ddes_1836 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar motor switch protein FliM YP_002480411.1 2216848 D 525146 CDS YP_002480412.1 220905100 7285550 complement(2218045..2218650) 1 NC_011883.1 TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: gme:Gmet_0923 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; D,D-heptose 1,7-bisphosphate phosphatase 2218650 7285550 Ddes_1837 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 D,D-heptose 1,7-bisphosphate phosphatase YP_002480412.1 2218045 R 525146 CDS YP_002480413.1 220905101 7285551 complement(2218692..2219156) 1 NC_011883.1 PFAM: protein of unknown function DUF307; KEGG: dvl:Dvul_1392 hypothetical protein; hypothetical protein 2219156 7285551 Ddes_1838 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480413.1 2218692 R 525146 CDS YP_002480414.1 220905102 7285552 complement(2219335..2220402) 1 NC_011883.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2220402 7285552 Ddes_1839 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylaminoimidazole synthetase YP_002480414.1 2219335 R 525146 CDS YP_002480415.1 220905103 7285553 2220970..2221962 1 NC_011883.1 KEGG: xau:Xaut_4723 SH3 type 3 domain-containing protein; hypothetical protein 2221962 7285553 Ddes_1840 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480415.1 2220970 D 525146 CDS YP_002480416.1 220905104 7285554 2221964..2222986 1 NC_011883.1 PFAM: Radical SAM domain protein; KEGG: dvl:Dvul_1670 radical SAM domain-containing protein; radical SAM protein 2222986 7285554 Ddes_1841 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002480416.1 2221964 D 525146 CDS YP_002480417.1 220905105 7285555 2222986..2223489 1 NC_011883.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: dvu:DVU1403 cob(I)alamin adenosyltransferase; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 2223489 7285555 Ddes_1842 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_002480417.1 2222986 D 525146 CDS YP_002480418.1 220905106 7285556 2223591..2224094 1 NC_011883.1 hypothetical protein 2224094 7285556 Ddes_1843 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480418.1 2223591 D 525146 CDS YP_002480419.1 220905107 7285557 complement(2224358..2225065) 1 NC_011883.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: dvl:Dvul_2204 transport-associated; transport-associated protein 2225065 7285557 Ddes_1844 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transport-associated protein YP_002480419.1 2224358 R 525146 CDS YP_002480420.1 220905108 7285558 complement(2225083..2226336) 1 NC_011883.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2226336 7285558 Ddes_1845 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002480420.1 2225083 R 525146 CDS YP_002480421.1 220905109 7285561 2227590..2228831 1 NC_011883.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1203 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2228831 7285561 Ddes_1846 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002480421.1 2227590 D 525146 CDS YP_002480422.1 220905110 7285562 2228845..2229513 1 NC_011883.1 PFAM: protein of unknown function DUF1641; KEGG: dvl:Dvul_1202 hypothetical protein; hypothetical protein 2229513 7285562 Ddes_1847 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480422.1 2228845 D 525146 CDS YP_002480423.1 220905111 7285563 complement(2229709..2230644) 1 NC_011883.1 hypothetical protein 2230644 7285563 Ddes_1848 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480423.1 2229709 R 525146 CDS YP_002480424.1 220905112 7285564 2230887..2231351 1 NC_011883.1 PFAM: adenylate cyclase; KEGG: cth:Cthe_2577 adenylate cyclase; adenylate cyclase 2231351 7285564 Ddes_1849 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylate cyclase YP_002480424.1 2230887 D 525146 CDS YP_002480425.1 220905113 7285565 2231366..2232004 1 NC_011883.1 KEGG: sse:Ssed_0364 hypothetical protein; hypothetical protein 2232004 7285565 Ddes_1850 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480425.1 2231366 D 525146 CDS YP_002480426.1 220905114 7285566 2232113..2233678 1 NC_011883.1 PFAM: sodium/sulphate symporter; KEGG: sfr:Sfri_3879 sodium/sulphate symporter; sodium/sulfate symporter 2233678 7285566 Ddes_1851 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sodium/sulfate symporter YP_002480426.1 2232113 D 525146 CDS YP_002480427.1 220905115 7285567 2233716..2234645 1 NC_011883.1 KEGG: xau:Xaut_4178 hypothetical protein; hypothetical protein 2234645 7285567 Ddes_1852 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480427.1 2233716 D 525146 CDS YP_002480428.1 220905116 7285568 2234670..2235515 1 NC_011883.1 KEGG: sse:Ssed_0371 hypothetical protein; hypothetical protein 2235515 7285568 Ddes_1853 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480428.1 2234670 D 525146 CDS YP_002480429.1 220905117 7285569 2235741..2236496 1 NC_011883.1 PFAM: Inorganic pyrophosphatase; KEGG: cpb:Cphamn1_1534 inorganic pyrophosphatase; inorganic pyrophosphatase 2236496 7285569 Ddes_1854 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inorganic pyrophosphatase YP_002480429.1 2235741 D 525146 CDS YP_002480430.1 220905118 7285570 complement(2236846..2237772) 1 NC_011883.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: syn:sll0030 cmp operon transcriptional regulator, LysR family protein; LysR family transcriptional regulator 2237772 7285570 Ddes_1855 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 LysR family transcriptional regulator YP_002480430.1 2236846 R 525146 CDS YP_002480431.1 220905119 7285571 2238047..2239678 1 NC_011883.1 KEGG: dvu:DVU0799 hypothetical protein; hypothetical protein 2239678 7285571 Ddes_1856 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480431.1 2238047 D 525146 CDS YP_002480432.1 220905120 7285572 2239846..2242908 1 NC_011883.1 KEGG: dvu:DVU2747 hypothetical protein; hypothetical protein 2242908 7285572 Ddes_1857 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480432.1 2239846 D 525146 CDS YP_002480433.1 220905121 7285573 2242975..2243343 1 NC_011883.1 hypothetical protein 2243343 7285573 Ddes_1858 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480433.1 2242975 D 525146 CDS YP_002480434.1 220905122 7285575 2244362..2245528 1 NC_011883.1 PFAM: glycerate kinase; KEGG: xac:XAC4360 glycerate kinase; glycerate kinase 2245528 7285575 Ddes_1860 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycerate kinase YP_002480434.1 2244362 D 525146 CDS YP_002480435.1 220905123 7285576 2245525..2245827 1 NC_011883.1 hypothetical protein 2245827 7285576 Ddes_1861 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480435.1 2245525 D 525146 CDS YP_002480436.1 220905124 7285577 complement(2246186..2246827) 1 NC_011883.1 PFAM: regulatory protein TetR; KEGG: sma:SAV_1132 TetR family transcriptional regulator; TetR family transcriptional regulator 2246827 7285577 Ddes_1862 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TetR family transcriptional regulator YP_002480436.1 2246186 R 525146 CDS YP_002480437.1 220905125 7285578 complement(2246900..2247610) 1 NC_011883.1 PFAM: protein of unknown function DUF134; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: chy:CHY_0236 hypothetical protein; hypothetical protein 2247610 7285578 Ddes_1863 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480437.1 2246900 R 525146 CDS YP_002480438.1 220905126 7285579 complement(2247981..2248361) 1 NC_011883.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: sfu:Sfum_3407 dinitrogenase iron-molybdenum cofactor biosynthesis; dinitrogenase iron-molybdenum cofactor biosynthesis protein 2248361 7285579 Ddes_1864 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002480438.1 2247981 R 525146 CDS YP_002480439.1 220905127 7285580 complement(2248375..2249295) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Cobyrinic acid ac-diamide synthase; KEGG: sfu:Sfum_3408 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 2249295 7285580 Ddes_1865 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cobyrinic acid ac-diamide synthase YP_002480439.1 2248375 R 525146 CDS YP_002480440.1 220905128 7285581 complement(2249283..2250338) 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_3409 cobyrinic acid a,c-diamide synthase; 4Fe-4S ferredoxin 2250338 7285581 Ddes_1866 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480440.1 2249283 R 525146 CDS YP_002480441.1 220905129 7285582 complement(2250345..2250695) 1 NC_011883.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: sfu:Sfum_3410 dinitrogenase iron-molybdenum cofactor biosynthesis; dinitrogenase iron-molybdenum cofactor biosynthesis protein 2250695 7285582 Ddes_1867 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002480441.1 2250345 R 525146 CDS YP_002480442.1 220905130 7285583 complement(2250896..2251792) 1 NC_011883.1 PFAM: protein of unknown function DUF52; KEGG: dvl:Dvul_0469 hypothetical protein; hypothetical protein 2251792 7285583 Ddes_1868 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480442.1 2250896 R 525146 CDS YP_002480443.1 220905131 7285584 complement(2252063..2253529) 1 NC_011883.1 PFAM: Aldehyde Dehydrogenase; KEGG: dac:Daci_0100 succinic semialdehyde dehydrogenase; aldehyde dehydrogenase 2253529 7285584 Ddes_1869 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aldehyde dehydrogenase YP_002480443.1 2252063 R 525146 CDS YP_002480444.1 220905132 7285585 complement(2253559..2254821) 1 NC_011883.1 KEGG: dvl:Dvul_0463 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase, multifunctional complex type 2254821 7285585 Ddes_1870 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydroorotase, multifunctional complex type YP_002480444.1 2253559 R 525146 CDS YP_002480445.1 220905133 7285586 complement(2254818..2255774) 1 NC_011883.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2255774 pyrB 7285586 pyrB Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate carbamoyltransferase catalytic subunit YP_002480445.1 2254818 R 525146 CDS YP_002480446.1 220905134 7285587 2256162..2256959 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_0529 hypothetical protein; hypothetical protein 2256959 7285587 Ddes_1872 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480446.1 2256162 D 525146 CDS YP_002480447.1 220905135 7285588 2256986..2257852 1 NC_011883.1 PFAM: protein of unknown function DUF161; KEGG: dvl:Dvul_0531 hypothetical protein; hypothetical protein 2257852 7285588 Ddes_1873 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480447.1 2256986 D 525146 CDS YP_002480448.1 220905136 7285589 2257861..2259159 1 NC_011883.1 PFAM: amidohydrolase; KEGG: dvu:DVU2900 amidohydrolase family protein; amidohydrolase 2259159 7285589 Ddes_1874 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amidohydrolase YP_002480448.1 2257861 D 525146 CDS YP_002480449.1 220905137 7285590 2259842..2260180 1 NC_011883.1 PFAM: Hpt domain protein; KEGG: pmy:Pmen_0835 multi-sensor hybrid histidine kinase; Hpt protein 2260180 7285590 Ddes_1875 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Hpt protein YP_002480449.1 2259842 D 525146 CDS YP_002480450.1 220905138 7285591 complement(2260556..2262925) 1 NC_011883.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dvl:Dvul_0934 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2262925 7285591 Ddes_1876 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heavy metal translocating P-type ATPase YP_002480450.1 2260556 R 525146 CDS YP_002480451.1 220905139 7285592 2263086..2263283 1 NC_011883.1 PFAM: Heavy metal transport/detoxification protein; KEGG: hmo:HM1_1698 copper ion binding protein, putative; heavy metal transport/detoxification protein 2263283 7285592 Ddes_1877 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heavy metal transport/detoxification protein YP_002480451.1 2263086 D 525146 CDS YP_002480452.1 220905140 7285593 2263657..2265150 1 NC_011883.1 KEGG: dvl:Dvul_0192 putative lipoprotein; putative lipoprotein 2265150 7285593 Ddes_1878 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative lipoprotein YP_002480452.1 2263657 D 525146 CDS YP_002480453.1 220905141 7285594 2265273..2266271 1 NC_011883.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: dvl:Dvul_0226 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 2266271 7285594 Ddes_1879 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_002480453.1 2265273 D 525146 CDS YP_002480454.1 220905142 7285595 2267149..2270886 1 NC_011883.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvl:Dvul_0969 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2270886 7285595 Ddes_1880 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (quinone) YP_002480454.1 2267149 D 525146 CDS YP_002480455.1 220905143 7285596 2270883..2271854 1 NC_011883.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dvl:Dvul_0968 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 2271854 7285596 Ddes_1881 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 respiratory-chain NADH dehydrogenase subunit 1 YP_002480455.1 2270883 D 525146 CDS YP_002480456.1 220905144 7285597 2271865..2272314 1 NC_011883.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dvl:Dvul_0967 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 2272314 7285597 Ddes_1882 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002480456.1 2271865 D 525146 CDS YP_002480457.1 220905145 7285598 2272316..2272894 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0966 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 2272894 7285598 Ddes_1883 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480457.1 2272316 D 525146 CDS YP_002480458.1 220905146 7285599 2272917..2273453 1 NC_011883.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvl:Dvul_0965 NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 2273453 7285599 Ddes_1884 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_002480458.1 2272917 D 525146 CDS YP_002480459.1 220905147 7285600 2273450..2274532 1 NC_011883.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dvl:Dvul_0964 NADH dehydrogenase (ubiquinone); NADH dehydrogenase (quinone) 2274532 7285600 Ddes_1885 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NADH dehydrogenase (quinone) YP_002480459.1 2273450 D 525146 CDS YP_002480460.1 220905148 7285601 2274681..2275064 1 NC_011883.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: dvl:Dvul_0963 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 2275064 7285601 Ddes_1886 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase nickel incorporation protein HypA YP_002480460.1 2274681 D 525146 CDS YP_002480461.1 220905149 7285602 2275057..2276217 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0962 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 2276217 7285602 Ddes_1887 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480461.1 2275057 D 525146 CDS YP_002480462.1 220905150 7285603 complement(2276364..2277404) 1 NC_011883.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein; Sel1 domain-containing protein 2277404 7285603 Ddes_1888 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Sel1 domain-containing protein YP_002480462.1 2276364 R 525146 CDS YP_002480463.1 220905151 7285604 complement(2277408..2279141) 1 NC_011883.1 KEGG: dvl:Dvul_2636 hypothetical protein; hypothetical protein 2279141 7285604 Ddes_1889 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480463.1 2277408 R 525146 CDS YP_002480464.1 220905152 7285605 complement(2279144..2280214) 1 NC_011883.1 PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: dvl:Dvul_2635 N-acylneuraminate-9-phosphate synthase; N-acetylneuraminate synthase 2280214 7285605 Ddes_1890 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetylneuraminate synthase YP_002480464.1 2279144 R 525146 CDS YP_002480465.1 220905153 7285606 2280488..2281393 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvu:DVU0947 hypothetical protein; hypothetical protein 2281393 7285606 Ddes_1891 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480465.1 2280488 D 525146 CDS YP_002480466.1 220905154 7285607 2281427..2282056 1 NC_011883.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 2282056 7285607 Ddes_1892 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative deoxyribonucleotide triphosphate pyrophosphatase YP_002480466.1 2281427 D 525146 CDS YP_002480467.1 220905155 7285608 2282374..2283342 1 NC_011883.1 KEGG: dvl:Dvul_0671 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2283342 7285608 Ddes_1893 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 oligopeptide/dipeptide ABC transporter ATPase YP_002480467.1 2282374 D 525146 CDS YP_002480468.1 220905156 7285609 complement(2283576..2284205) 1 NC_011883.1 PFAM: SirA family protein; KEGG: dvl:Dvul_1417 hypothetical protein; SirA family protein 2284205 7285609 Ddes_1894 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SirA family protein YP_002480468.1 2283576 R 525146 CDS YP_002480469.1 220905157 7285610 2284306..2285985 1 NC_011883.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; KEGG: dvl:Dvul_2798 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2285985 7285610 Ddes_1895 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002480469.1 2284306 D 525146 CDS YP_002480470.1 220905158 7285611 complement(2286428..2286820) 1 NC_011883.1 KEGG: dvl:Dvul_2922 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 2286820 7285611 Ddes_1896 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TraR/DksA family transcriptional regulator YP_002480470.1 2286428 R 525146 CDS YP_002480471.1 220905159 7285612 complement(2287101..2287676) 1 NC_011883.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: chy:CHY_2702 glutamine amidotransferase subunit PdxT; SNO glutamine amidotransferase 2287676 7285612 Ddes_1897 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SNO glutamine amidotransferase YP_002480471.1 2287101 R 525146 CDS YP_002480472.1 220905160 7285613 complement(2287677..2288558) 1 NC_011883.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 2288558 7285613 Ddes_1898 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pyridoxal biosynthesis lyase PdxS YP_002480472.1 2287677 R 525146 CDS YP_002480473.1 220905161 7285614 2288759..2289598 1 NC_011883.1 KEGG: dvl:Dvul_1698 hypothetical protein; hypothetical protein 2289598 7285614 Ddes_1899 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480473.1 2288759 D 525146 CDS YP_002480474.1 220905162 7285615 2289595..2290260 1 NC_011883.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dvl:Dvul_1697 HAD family hydrolase; HAD-superfamily hydrolase 2290260 7285615 Ddes_1900 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HAD-superfamily hydrolase YP_002480474.1 2289595 D 525146 CDS YP_002480475.1 220905163 7285616 2290328..2290630 1 NC_011883.1 PFAM: protein of unknown function YGGT; KEGG: dvl:Dvul_1696 protein of unknown function YGGT; hypothetical protein 2290630 7285616 Ddes_1901 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480475.1 2290328 D 525146 CDS YP_002480476.1 220905164 7285617 2290685..2290915 1 NC_011883.1 KEGG: dvl:Dvul_1693 hypothetical protein; hypothetical protein 2290915 7285617 Ddes_1902 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480476.1 2290685 D 525146 CDS YP_002480477.1 220905165 7285618 2290937..2292628 1 NC_011883.1 KEGG: dvl:Dvul_1692 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; acetolactate synthase large subunit 2292628 7285618 Ddes_1903 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetolactate synthase large subunit YP_002480477.1 2290937 D 525146 CDS YP_002480478.1 220905166 7285619 2292639..2293130 1 NC_011883.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2293130 ilvH 7285619 ilvH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetolactate synthase 3 regulatory subunit YP_002480478.1 2292639 D 525146 CDS YP_002480479.1 220905167 7285620 2293546..2294547 1 NC_011883.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2294547 7285620 Ddes_1905 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ketol-acid reductoisomerase YP_002480479.1 2293546 D 525146 CDS YP_002480480.1 220905168 7285621 2295197..2297473 1 NC_011883.1 KEGG: dvl:Dvul_0214 putative CheA signal transduction histidine kinases; hypothetical protein 2297473 7285621 Ddes_1906 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480480.1 2295197 D 525146 CDS YP_002480481.1 220905169 7285622 2298212..2298382 1 NC_011883.1 KEGG: dvl:Dvul_0213 hypothetical protein; hypothetical protein 2298382 7285622 Ddes_1907 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480481.1 2298212 D 525146 CDS YP_002480482.1 220905170 7285623 2298383..2299138 1 NC_011883.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dvl:Dvul_0212 ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 2299138 7285623 Ddes_1908 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ubiquinone/menaquinone biosynthesis methyltransferase YP_002480482.1 2298383 D 525146 CDS YP_002480483.1 220905171 7285624 complement(2299446..2299643) 1 NC_011883.1 KEGG: pla:Plav_2460 hypothetical protein; hypothetical protein 2299643 7285624 Ddes_1909 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480483.1 2299446 R 525146 CDS YP_002480484.1 220905172 7285625 2299691..2301004 1 NC_011883.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: dvl:Dvul_0210 UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 2301004 7285625 Ddes_1910 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nucleotide sugar dehydrogenase YP_002480484.1 2299691 D 525146 CDS YP_002480485.1 220905173 7285626 2301010..2301786 1 NC_011883.1 PFAM: purine or other phosphorylase family 1; KEGG: dvl:Dvul_0209 hypothetical protein; purine or other phosphorylase family protein 2301786 7285626 Ddes_1911 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 purine or other phosphorylase family protein YP_002480485.1 2301010 D 525146 CDS YP_002480486.1 220905174 7285627 2301795..2302760 1 NC_011883.1 PFAM: Polyprenyl synthetase; KEGG: dvl:Dvul_0208 trans-hexaprenyltranstransferase; polyprenyl synthetase 2302760 7285627 Ddes_1912 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polyprenyl synthetase YP_002480486.1 2301795 D 525146 CDS YP_002480487.1 220905175 7285628 2302786..2305785 1 NC_011883.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dvl:Dvul_0206 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase 2305785 7285628 Ddes_1913 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylformylglycinamidine synthase YP_002480487.1 2302786 D 525146 CDS YP_002480488.1 220905176 7285629 complement(2306564..2307163) 1 NC_011883.1 KEGG: rpe:RPE_4691 hypothetical protein; hypothetical protein 2307163 7285629 Ddes_1914 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480488.1 2306564 R 525146 CDS YP_002480489.1 220905177 7285630 complement(2307290..2308486) 1 NC_011883.1 PFAM: protein of unknown function DUF111; KEGG: dvu:DVU2772 hypothetical protein; hypothetical protein 2308486 7285630 Ddes_1915 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480489.1 2307290 R 525146 CDS YP_002480490.1 220905178 7285631 2308633..2309292 1 NC_011883.1 PFAM: CBS domain containing protein; KEGG: dvl:Dvul_0535 CBS domain-containing protein; hypothetical protein 2309292 7285631 Ddes_1916 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480490.1 2308633 D 525146 CDS YP_002480491.1 220905179 7285632 2309544..2309861 1 NC_011883.1 TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: dvl:Dvul_0534 DsrC family protein; TusE/DsrC/DsvC family sulfur relay protein 2309861 7285632 Ddes_1917 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TusE/DsrC/DsvC family sulfur relay protein YP_002480491.1 2309544 D 525146 CDS YP_002480492.1 220905180 7285633 2310197..2312635 1 NC_011883.1 KEGG: dvl:Dvul_2326 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 2312635 7285633 Ddes_1918 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 penicillin-binding protein YP_002480492.1 2310197 D 525146 CDS YP_002480493.1 220905181 7285634 2312935..2313843 1 NC_011883.1 PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: dvu:DVU3053 hypothetical protein; tRNA methyltransferase complex GCD14 subunit 2313843 7285634 Ddes_1919 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA methyltransferase complex GCD14 subunit YP_002480493.1 2312935 D 525146 CDS YP_002480494.1 220905182 7285635 complement(2314176..2315147) 1 NC_011883.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: dvu:DVU0481 ADP-L-glycero-D-mannoheptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 2315147 7285635 Ddes_1920 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ADP-L-glycero-D-manno-heptose-6-epimerase YP_002480494.1 2314176 R 525146 CDS YP_002480495.1 220905183 7285636 2315299..2315625 1 NC_011883.1 hypothetical protein 2315625 7285636 Ddes_1921 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480495.1 2315299 D 525146 CDS YP_002480496.1 220905184 7285637 2315618..2316412 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1972 ABC transporter related; ABC transporter-like protein 2316412 7285637 Ddes_1922 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480496.1 2315618 D 525146 CDS YP_002480497.1 220905185 7285638 2316409..2317572 1 NC_011883.1 PFAM: SufBD protein; KEGG: dvl:Dvul_1973 SufBD protein; SufBD protein 2317572 7285638 Ddes_1923 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SufBD protein YP_002480497.1 2316409 D 525146 CDS YP_002480498.1 220905186 7285640 2318077..2318619 1 NC_011883.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bte:BTH_II0021 PAP2 family protein; PA-phosphatase-like phosphoesterase 2318619 7285640 Ddes_1924 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PA-phosphatase-like phosphoesterase YP_002480498.1 2318077 D 525146 CDS YP_002480499.1 220905187 7285641 2318725..2319081 1 NC_011883.1 SMART: regulatory protein ArsR; KEGG: psa:PST_0241 arsenic resistance transcriptional regulator; putative ArsR family transcriptional regulator 2319081 7285641 Ddes_1925 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative ArsR family transcriptional regulator YP_002480499.1 2318725 D 525146 CDS YP_002480500.1 220905188 7285642 2319185..2320030 1 NC_011883.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dol:Dole_0762 arsenite S-adenosylmethyltransferase; type 11 methyltransferase 2320030 7285642 Ddes_1926 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 11 methyltransferase YP_002480500.1 2319185 D 525146 CDS YP_002480501.1 220905189 7285643 2320704..2320970 1 NC_011883.1 PFAM: RNP-1 like RNA-binding protein; KEGG: dvl:Dvul_0803 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 2320970 7285643 Ddes_1927 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RNP-1 like RNA-binding protein YP_002480501.1 2320704 D 525146 CDS YP_002480502.1 220905190 7285644 complement(2321186..2322289) 1 NC_011883.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2322289 secF 7285644 secF Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 preprotein translocase subunit SecF YP_002480502.1 2321186 R 525146 CDS YP_002480503.1 220905191 7285645 complement(2322307..2323887) 1 NC_011883.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 2323887 secD 7285645 secD Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 preprotein translocase subunit SecD YP_002480503.1 2322307 R 525146 CDS YP_002480504.1 220905192 7285646 complement(2324154..2324489) 1 NC_011883.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: dvl:Dvul_1340 preprotein translocase, YajC subunit; preprotein translocase subunit YajC 2324489 7285646 Ddes_1930 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 preprotein translocase subunit YajC YP_002480504.1 2324154 R 525146 CDS YP_002480505.1 220905193 7285647 2324847..2326169 1 NC_011883.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: dvu:DVU1825 amidohydrolase family protein; amidohydrolase 2326169 7285647 Ddes_1931 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 amidohydrolase YP_002480505.1 2324847 D 525146 CDS YP_002480506.1 220905194 7285648 2326369..2326632 1 NC_011883.1 KEGG: dvl:Dvul_1334 hypothetical protein; hypothetical protein 2326632 7285648 Ddes_1932 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480506.1 2326369 D 525146 CDS YP_002480507.1 220905195 7285649 2327240..2328481 1 NC_011883.1 catalyzes the transamination of diaminopimelate with 2-oxoglutarate to produce tetrahydrodipicolinate and glutamate; diaminopimelate aminotransferase 2328481 7285649 Ddes_1933 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diaminopimelate aminotransferase YP_002480507.1 2327240 D 525146 CDS YP_002480508.1 220905196 7285650 2328474..2330456 1 NC_011883.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2330456 7285650 Ddes_1934 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002480508.1 2328474 D 525146 CDS YP_002480509.1 220905197 7285651 2330578..2331510 1 NC_011883.1 KEGG: dvl:Dvul_1331 hypothetical protein; hypothetical protein 2331510 7285651 Ddes_1935 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480509.1 2330578 D 525146 CDS YP_002480510.1 220905198 7285652 2331840..2332955 1 NC_011883.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: dvl:Dvul_1330 CBS domain-containing protein; hypothetical protein 2332955 7285652 Ddes_1936 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480510.1 2331840 D 525146 CDS YP_002480511.1 220905199 7285653 2332952..2334610 1 NC_011883.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 2334610 lnt 7285653 lnt Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 apolipoprotein N-acyltransferase YP_002480511.1 2332952 D 525146 CDS YP_002480512.1 220905200 7285654 join(2334710..2334784,2334786..2335823) 1 NC_011883.1 KEGG: bpm:BURPS1710b_A1695 hypothetical protein; hypothetical protein 2335823 7285654 Ddes_1938 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480512.1 2334710 D 525146 CDS YP_002480513.1 220905201 7285655 2335807..2336646 1 NC_011883.1 KEGG: dvu:DVU1862 GGDEF domain-containing protein; putative diguanylate cyclase 2336646 7285655 Ddes_1939 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative diguanylate cyclase YP_002480513.1 2335807 D 525146 CDS YP_002480514.1 220905202 7285656 2336646..2337458 1 NC_011883.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_1300 flagellar synthesis regulator FleN, putative; Cobyrinic acid ac-diamide synthase 2337458 7285656 Ddes_1940 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Cobyrinic acid ac-diamide synthase YP_002480514.1 2336646 D 525146 CDS YP_002480515.1 220905203 7285657 2337689..2337964 1 NC_011883.1 PFAM: histone family protein DNA-binding protein; KEGG: dvl:Dvul_1299 histone family protein DNA-binding protein; histone family protein DNA-binding protein 2337964 7285657 Ddes_1941 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histone family protein DNA-binding protein YP_002480515.1 2337689 D 525146 CDS YP_002480516.1 220905204 7285658 2338080..2338958 1 NC_011883.1 KEGG: dvl:Dvul_1296 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 2338958 7285658 Ddes_1942 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydrodipicolinate synthase YP_002480516.1 2338080 D 525146 CDS YP_002480517.1 220905205 7285659 complement(2339290..2340489) 1 NC_011883.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dvl:Dvul_0825 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2340489 7285659 Ddes_1943 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 iron-containing alcohol dehydrogenase YP_002480517.1 2339290 R 525146 CDS YP_002480518.1 220905206 7285660 complement(2340986..2341174) 1 NC_011883.1 hypothetical protein 2341174 7285660 Ddes_1944 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480518.1 2340986 R 525146 CDS YP_002480519.1 220905207 7285661 complement(2341683..2344727) 1 NC_011883.1 KEGG: dvu:DVU2747 hypothetical protein; hypothetical protein 2344727 7285661 Ddes_1945 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480519.1 2341683 R 525146 CDS YP_002480520.1 220905208 7285662 complement(2345022..2346413) 1 NC_011883.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 2346413 thiH 7285662 thiH Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine biosynthesis protein ThiH YP_002480520.1 2345022 R 525146 CDS YP_002480521.1 220905209 7285663 2346861..2347976 1 NC_011883.1 PFAM: basic membrane lipoprotein; KEGG: tte:TTE0457 surface lipoprotein; basic membrane lipoprotein 2347976 7285663 Ddes_1947 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 basic membrane lipoprotein YP_002480521.1 2346861 D 525146 CDS YP_002480522.1 220905210 7285664 2348242..2349327 1 NC_011883.1 KEGG: vei:Veis_0768 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein 2349327 7285664 Ddes_1948 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein YP_002480522.1 2348242 D 525146 CDS YP_002480523.1 220905211 7285665 complement(2349528..2350583) 1 NC_011883.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein 2350583 7285665 Ddes_1949 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 bifunctional methionine sulfoxide reductase B/A protein YP_002480523.1 2349528 R 525146 CDS YP_002480524.1 220905212 7285666 complement(2350958..2351944) 1 NC_011883.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cbe:Cbei_4420 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2351944 7285666 Ddes_1950 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UDP-glucose 4-epimerase YP_002480524.1 2350958 R 525146 CDS YP_002480525.1 220905213 7285667 complement(2352438..2352884) 1 NC_011883.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: dvu:DVU2680 flavodoxin; flavodoxin 2352884 7285667 Ddes_1951 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flavodoxin YP_002480525.1 2352438 R 525146 CDS YP_002480526.1 220905214 7285668 complement(2353158..2354603) 1 NC_011883.1 PFAM: Radical SAM domain protein; KEGG: dvl:Dvul_1667 radical SAM domain-containing protein; radical SAM protein 2354603 7285668 Ddes_1952 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002480526.1 2353158 R 525146 CDS YP_002480527.1 220905215 7285669 2354690..2355178 1 NC_011883.1 KEGG: fal:FRAAL2262 hypothetical protein; hypothetical protein 2355178 7285669 Ddes_1953 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480527.1 2354690 D 525146 CDS YP_002480528.1 220905216 7285670 complement(2355368..2356414) 1 NC_011883.1 KEGG: dvl:Dvul_1664 hypothetical protein; hypothetical protein 2356414 7285670 Ddes_1954 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480528.1 2355368 R 525146 CDS YP_002480529.1 220905217 7285671 2356535..2359747 1 NC_011883.1 KEGG: dvu:DVU1415 AsmA family protein; hypothetical protein 2359747 7285671 Ddes_1955 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480529.1 2356535 D 525146 CDS YP_002480530.1 220905218 7285672 2359896..2360567 1 NC_011883.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2360567 7285672 Ddes_1956 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylate kinase YP_002480530.1 2359896 D 525146 CDS YP_002480531.1 220905219 7285673 2360702..2361397 1 NC_011883.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: dvl:Dvul_0913 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 2361397 7285673 Ddes_1957 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_002480531.1 2360702 D 525146 CDS YP_002480532.1 220905220 7285674 2361462..2362667 1 NC_011883.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 2362667 7285674 Ddes_1958 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acetylornithine aminotransferase YP_002480532.1 2361462 D 525146 CDS YP_002480533.1 220905221 7285675 2362795..2363013 1 NC_011883.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: dvl:Dvul_0951 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 2363013 7285675 Ddes_1959 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TraR/DksA family transcriptional regulator YP_002480533.1 2362795 D 525146 CDS YP_002480534.1 220905222 7285676 complement(2363336..2364340) 1 NC_011883.1 PFAM: phosphate transporter; KEGG: dvl:Dvul_0952 phosphate transporter; phosphate transporter 2364340 7285676 Ddes_1960 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphate transporter YP_002480534.1 2363336 R 525146 CDS YP_002480535.1 220905223 7285677 complement(2364333..2364962) 1 NC_011883.1 KEGG: dvl:Dvul_0953 hypothetical protein; hypothetical protein 2364962 7285677 Ddes_1961 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480535.1 2364333 R 525146 CDS YP_002480536.1 220905224 7285678 complement(2365214..2366695) 1 NC_011883.1 PFAM: pseudouridine synthase; KEGG: dvl:Dvul_0578 pseudouridine synthase; pseudouridine synthase 2366695 7285678 Ddes_1962 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pseudouridine synthase YP_002480536.1 2365214 R 525146 CDS YP_002480537.1 220905225 7285679 complement(2366696..2367934) 1 NC_011883.1 KEGG: dvl:Dvul_1907 protein of unknown function UPF0052 and CofD; hypothetical protein 2367934 7285679 Ddes_1963 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480537.1 2366696 R 525146 CDS YP_002480538.1 220905226 7285680 complement(2367931..2368575) 1 NC_011883.1 PFAM: 3'-5' exonuclease; KEGG: dvl:Dvul_1912 3'-5' exonuclease; 3'-5' exonuclease 2368575 7285680 Ddes_1964 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3'-5' exonuclease YP_002480538.1 2367931 R 525146 CDS YP_002480539.1 220905227 7285681 complement(2368591..2369997) 1 NC_011883.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 2369997 trmE 7285681 trmE Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA modification GTPase TrmE YP_002480539.1 2368591 R 525146 CDS YP_002480540.1 220905228 7285682 complement(2370808..2372175) 1 NC_011883.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: dvl:Dvul_1916 single-stranded nucleic acid binding R3H domain-containing protein; single-stranded nucleic acid binding R3H domain-containing protein 2372175 7285682 Ddes_1966 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 single-stranded nucleic acid binding R3H domain-containing protein YP_002480540.1 2370808 R 525146 CDS YP_002480541.1 220905229 7285683 complement(2372218..2373864) 1 NC_011883.1 TIGRFAM: YidC translocase/secretase; PFAM: 60 kDa inner membrane insertion protein; KEGG: dvl:Dvul_1917 60 kDa inner membrane insertion protein; YidC translocase/secretase 2373864 7285683 Ddes_1967 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 YidC translocase/secretase YP_002480541.1 2372218 R 525146 CDS YP_002480542.1 220905230 7285684 complement(2373873..2374136) 1 NC_011883.1 PFAM: protein of unknown function DUF37; KEGG: dvl:Dvul_1918 hypothetical protein; hypothetical protein 2374136 7285684 Ddes_1968 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480542.1 2373873 R 525146 CDS YP_002480543.1 220905231 7285685 complement(2374133..2374525) 1 NC_011883.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: sat:SYN_01012 ribonuclease P protein component; ribonuclease P protein component 2374525 7285685 Ddes_1969 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ribonuclease P protein component YP_002480543.1 2374133 R 525146 CDS YP_002480544.1 220905232 7285686 complement(2374568..2374702) 1 NC_011883.1 PFAM: ribosomal protein L34; KEGG: hha:Hhal_1228 ribosomal protein L34; 50S ribosomal protein L34 2374702 7285686 Ddes_1970 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L34 YP_002480544.1 2374568 R 525146 CDS YP_002480545.1 220905233 7285687 complement(2375196..2376242) 1 NC_011883.1 KEGG: cur:cu1817 putative Fe-S oxidoreductase; hypothetical protein 2376242 7285687 Ddes_1971 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480545.1 2375196 R 525146 CDS YP_002480546.1 220905234 7285688 complement(2376301..2376432) 1 NC_011883.1 hypothetical protein 2376432 7285688 Ddes_1972 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480546.1 2376301 R 525146 CDS YP_002480547.1 220905235 7285689 2376567..2377145 1 NC_011883.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2377145 aroK 7285689 aroK Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 shikimate kinase YP_002480547.1 2376567 D 525146 CDS YP_002480548.1 220905236 7285690 2377153..2377560 1 NC_011883.1 hypothetical protein 2377560 7285690 Ddes_1974 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480548.1 2377153 D 525146 CDS YP_002480549.1 220905237 7285691 complement(2377684..2378247) 1 NC_011883.1 KEGG: dvl:Dvul_1655 hypothetical protein; hypothetical protein 2378247 7285691 Ddes_1975 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480549.1 2377684 R 525146 CDS YP_002480550.1 220905238 7285692 complement(2378325..2379320) 1 NC_011883.1 PFAM: OmpA/MotB domain protein; KEGG: lip:LI0902 outer membrane protein; OmpA/MotB domain-containing protein 2379320 7285692 Ddes_1976 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 OmpA/MotB domain-containing protein YP_002480550.1 2378325 R 525146 CDS YP_002480551.1 220905239 7285693 2379625..2380476 1 NC_011883.1 KEGG: dvl:Dvul_0561 hypothetical protein; hypothetical protein 2380476 7285693 Ddes_1977 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480551.1 2379625 D 525146 CDS YP_002480552.1 220905240 7285694 2380479..2381948 1 NC_011883.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: dvu:DVU2750 cobalamin biosynthesis protein CbiD; cobalamin (vitamin B12) biosynthesis CbiD protein 2381948 7285694 Ddes_1978 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobalamin (vitamin B12) biosynthesis CbiD protein YP_002480552.1 2380479 D 525146 CDS YP_002480553.1 220905241 7285695 2381945..2383747 1 NC_011883.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvu:DVU2749 precorrin-6Y C5,15-methyltransferase (decarboxylating); precorrin-6y C5,15-methyltransferase subunit CbiE 2383747 7285695 Ddes_1979 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 precorrin-6y C5,15-methyltransferase subunit CbiE YP_002480553.1 2381945 D 525146 CDS YP_002480554.1 220905242 7285696 2383804..2384667 1 NC_011883.1 KEGG: dvl:Dvul_0559 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 2384667 7285696 Ddes_1980 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 precorrin-4 C(11)-methyltransferase YP_002480554.1 2383804 D 525146 CDS YP_002480555.1 220905243 7285697 2385192..2386700 1 NC_011883.1 PFAM: Aldehyde Dehydrogenase; KEGG: cbe:Cbei_0729 aldehyde dehydrogenase; aldehyde dehydrogenase 2386700 7285697 Ddes_1981 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aldehyde dehydrogenase YP_002480555.1 2385192 D 525146 CDS YP_002480556.1 220905244 7285698 complement(2387599..2387877) 1 NC_011883.1 hypothetical protein 2387877 7285698 Ddes_1982 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480556.1 2387599 R 525146 CDS YP_002480557.1 220905245 7285699 2388299..2389144 1 NC_011883.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dvl:Dvul_0767 ferredoxin--NADP(+) reductase subunit alpha; ferredoxin-NADP(+) reductase subunit alpha 2389144 7285699 Ddes_1983 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ferredoxin-NADP(+) reductase subunit alpha YP_002480557.1 2388299 D 525146 CDS YP_002480558.1 220905246 7285700 2389134..2390555 1 NC_011883.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 2390555 7285700 Ddes_1984 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative oxidoreductase YP_002480558.1 2389134 D 525146 CDS YP_002480559.1 220905247 7285701 2390802..2391629 1 NC_011883.1 KEGG: dvu:DVU2490 histidinol phosphatase, putative; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; histidinol phosphate phosphatase protein 2391629 7285701 Ddes_1985 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidinol phosphate phosphatase protein YP_002480559.1 2390802 D 525146 CDS YP_002480560.1 220905248 7285702 2391728..2393233 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU2491 ABC transporter, ATP-binding protein; ABC transporter-like protein 2393233 7285702 Ddes_1986 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480560.1 2391728 D 525146 CDS YP_002480561.1 220905249 7285703 complement(2393318..2393986) 1 NC_011883.1 PFAM: SNARE associated Golgi protein; KEGG: dvl:Dvul_0575 DedA family protein; hypothetical protein 2393986 7285703 Ddes_1987 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480561.1 2393318 R 525146 CDS YP_002480562.1 220905250 7285704 2394076..2395206 1 NC_011883.1 KEGG: dvl:Dvul_0630 hypothetical protein; hypothetical protein 2395206 7285704 Ddes_1988 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480562.1 2394076 D 525146 CDS YP_002480563.1 220905251 7285705 2395497..2396078 1 NC_011883.1 KEGG: dvl:Dvul_0629 hypothetical protein; hypothetical protein 2396078 7285705 Ddes_1989 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480563.1 2395497 D 525146 CDS YP_002480564.1 220905252 7285706 2396250..2396654 1 NC_011883.1 KEGG: lip:LI0797 hypothetical protein; hypothetical protein 2396654 7285706 Ddes_1990 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480564.1 2396250 D 525146 CDS YP_002480565.1 220905253 7285707 complement(2396971..2399121) 1 NC_011883.1 PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_0340 hypothetical protein; hypothetical protein 2399121 7285707 Ddes_1991 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480565.1 2396971 R 525146 CDS YP_002480566.1 220905254 7285708 complement(2399125..2399757) 1 NC_011883.1 PFAM: protein of unknown function DUF162; KEGG: dvl:Dvul_0341 hypothetical protein; hypothetical protein 2399757 7285708 Ddes_1992 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480566.1 2399125 R 525146 CDS YP_002480567.1 220905255 7285709 complement(2399839..2401134) 1 NC_011883.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_0345 hypothetical protein; hypothetical protein 2401134 7285709 Ddes_1993 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480567.1 2399839 R 525146 CDS YP_002480568.1 220905256 7285710 complement(2401144..2402529) 1 NC_011883.1 PFAM: FAD linked oxidase domain protein; KEGG: dvl:Dvul_0346 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 2402529 7285710 Ddes_1994 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD linked oxidase domain-containing protein YP_002480568.1 2401144 R 525146 CDS YP_002480569.1 220905257 7285711 2402553..2403815 1 NC_011883.1 KEGG: sequence orphan; hypothetical protein 2403815 7285711 Ddes_1995 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480569.1 2402553 D 525146 CDS YP_002480570.1 220905258 7285712 2404074..2409083 1 NC_011883.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ent:Ent638_0501 outer membrane autotransporter; outer membrane autotransporter barrel domain-containing protein 2409083 7285712 Ddes_1996 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane autotransporter barrel domain-containing protein YP_002480570.1 2404074 D 525146 CDS YP_002480571.1 220905259 7285713 2409377..2409961 1 NC_011883.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: ecm:EcSMS35_2509 putative outer membrane protein; outer membrane chaperone Skp 2409961 7285713 Ddes_1997 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane chaperone Skp YP_002480571.1 2409377 D 525146 CDS YP_002480572.1 220905260 7285714 complement(2410310..2410810) 1 NC_011883.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 2410810 7285714 Ddes_1998 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar assembly protein FliW YP_002480572.1 2410310 R 525146 CDS YP_002480573.1 220905261 7285715 complement(2410789..2411025) 1 NC_011883.1 PFAM: carbon storage regulator; KEGG: dvl:Dvul_2420 carbon storage regulator, CsrA; carbon storage regulator CsrA 2411025 7285715 Ddes_1999 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carbon storage regulator CsrA YP_002480573.1 2410789 R 525146 CDS YP_002480574.1 220905262 7285716 complement(2411038..2412576) 1 NC_011883.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: lip:LI0748 flagellin-like protein; flagellar hook-associated protein 3 2412576 7285716 Ddes_2000 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar hook-associated protein 3 YP_002480574.1 2411038 R 525146 CDS YP_002480575.1 220905263 7285717 complement(2412744..2414891) 1 NC_011883.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0747 flagellar hook-associated protein; flagellar hook-associated protein FlgK 2414891 7285717 Ddes_2001 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar hook-associated protein FlgK YP_002480575.1 2412744 R 525146 CDS YP_002480576.1 220905264 7285718 complement(2414895..2415362) 1 NC_011883.1 PFAM: FlgN family protein; KEGG: dvl:Dvul_2423 hypothetical protein; FlgN family protein 2415362 7285718 Ddes_2002 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FlgN family protein YP_002480576.1 2414895 R 525146 CDS YP_002480577.1 220905265 7285719 complement(2415602..2417284) 1 NC_011883.1 PFAM: flagellar protein FlgJ; KEGG: dvl:Dvul_2424 peptidase M23B; flagellar protein FlgJ 2417284 7285719 Ddes_2003 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar protein FlgJ YP_002480577.1 2415602 R 525146 CDS YP_002480578.1 220905266 7285720 complement(2417285..2418397) 1 NC_011883.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 2418397 flgI 7285720 flgI Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar basal body P-ring protein YP_002480578.1 2417285 R 525146 CDS YP_002480579.1 220905267 7285721 complement(2418951..2419274) 1 NC_011883.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: dvl:Dvul_2418 anti-sigma-28 factor, FlgM; anti-sigma-28 factor FlgM 2419274 7285721 Ddes_2005 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anti-sigma-28 factor FlgM YP_002480579.1 2418951 R 525146 CDS YP_002480580.1 220905268 7285722 complement(2419318..2419767) 1 NC_011883.1 KEGG: dvl:Dvul_2417 hypothetical protein; hypothetical protein 2419767 7285722 Ddes_2006 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480580.1 2419318 R 525146 CDS YP_002480581.1 220905269 7285723 complement(2420197..2421576) 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: dvl:Dvul_2415 major facilitator superfamily transporter; major facilitator superfamily protein 2421576 7285723 Ddes_2007 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002480581.1 2420197 R 525146 CDS YP_002480582.1 220905270 7285724 complement(2421703..2422602) 1 NC_011883.1 PFAM: methylenetetrahydrofolate reductase; KEGG: dvl:Dvul_1992 5,10-methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 2422602 7285724 Ddes_2008 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methylenetetrahydrofolate reductase YP_002480582.1 2421703 R 525146 CDS YP_002480583.1 220905271 7285725 2422918..2424207 1 NC_011883.1 KEGG: dvu:DVU0996 hypothetical protein; hypothetical protein 2424207 7285725 Ddes_2009 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480583.1 2422918 D 525146 CDS YP_002480584.1 220905272 7285726 2424611..2424991 1 NC_011883.1 TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: dvl:Dvul_0204 desulfoferrodoxin; desulfoferrodoxin 2424991 7285726 Ddes_2010 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 desulfoferrodoxin YP_002480584.1 2424611 D 525146 CDS YP_002480585.1 220905273 7285727 2425060..2425197 1 NC_011883.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: emi:Emin_0014 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2425197 7285727 Ddes_2011 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rubredoxin-type Fe(Cys)4 protein YP_002480585.1 2425060 D 525146 CDS YP_002480586.1 220905274 7285728 2425297..2426505 1 NC_011883.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: dvl:Dvul_0202 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 2426505 7285728 Ddes_2012 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-lactamase domain-containing protein YP_002480586.1 2425297 D 525146 CDS YP_002480587.1 220905275 7285729 complement(2426734..2427120) 1 NC_011883.1 PFAM: cytochrome c class III; KEGG: dvl:Dvul_0215 cytochrome c, class III; cytochrome c class III 2427120 7285729 Ddes_2013 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c class III YP_002480587.1 2426734 R 525146 CDS YP_002480588.1 220905276 7285730 complement(2427232..2427993) 1 NC_011883.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvu:DVU3170 precorrin-3b C17-methyltransferase; precorrin-3B C(17)-methyltransferase 2427993 7285730 Ddes_2014 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 precorrin-3B C(17)-methyltransferase YP_002480588.1 2427232 R 525146 CDS YP_002480589.1 220905277 7285731 complement(2427990..2429264) 1 NC_011883.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: dvl:Dvul_0217 cobalamin (vitamin B12) biosynthesis CbiG protein; cobalamin (vitamin B12) biosynthesis protein CbiG 2429264 7285731 Ddes_2015 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobalamin (vitamin B12) biosynthesis protein CbiG YP_002480589.1 2427990 R 525146 CDS YP_002480590.1 220905278 7285732 complement(2429219..2429446) 1 NC_011883.1 hypothetical protein 2429446 7285732 Ddes_2016 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480590.1 2429219 R 525146 CDS YP_002480591.1 220905279 7285733 complement(2429531..2430802) 1 NC_011883.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: dvl:Dvul_0218 glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 2430802 7285733 Ddes_2017 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamate-1-semialdehyde-2,1-aminomutase YP_002480591.1 2429531 R 525146 CDS YP_002480592.1 220905280 7285734 complement(2430942..2431421) 1 NC_011883.1 KEGG: dvl:Dvul_0219 AsnC family transcriptional regulator; putative AsnC family transcriptional regulator 2431421 7285734 Ddes_2018 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative AsnC family transcriptional regulator YP_002480592.1 2430942 R 525146 CDS YP_002480593.1 220905281 7285735 complement(2431551..2432105) 1 NC_011883.1 KEGG: dvl:Dvul_0805 hypothetical protein; hypothetical protein 2432105 7285735 Ddes_2019 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480593.1 2431551 R 525146 CDS YP_002480594.1 220905282 7285736 complement(2432885..2433151) 1 NC_011883.1 PFAM: RNP-1 like RNA-binding protein; KEGG: dvl:Dvul_0803 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 2433151 7285736 Ddes_2020 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RNP-1 like RNA-binding protein YP_002480594.1 2432885 R 525146 CDS YP_002480595.1 220905283 7285737 complement(2434210..2435736) 1 NC_011883.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dvu:DVU0959 replicative DNA helicase; replicative DNA helicase 2435736 7285737 Ddes_2021 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 replicative DNA helicase YP_002480595.1 2434210 R 525146 CDS YP_002480596.1 220905284 7285738 complement(2435745..2436251) 1 NC_011883.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2436251 rplI 7285738 rplI Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L9 YP_002480596.1 2435745 R 525146 CDS YP_002480597.1 220905285 7285739 complement(2436262..2436525) 1 NC_011883.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2436525 rpsR 7285739 rpsR Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S18 YP_002480597.1 2436262 R 525146 CDS YP_002480598.1 220905286 7285740 complement(2436527..2436835) 1 NC_011883.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2436835 rpsF 7285740 rpsF Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S6 YP_002480598.1 2436527 R 525146 CDS YP_002480599.1 220905287 7285741 complement(2437008..2437907) 1 NC_011883.1 hypothetical protein 2437907 7285741 Ddes_2025 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480599.1 2437008 R 525146 CDS YP_002480600.1 220905288 7285742 2438030..2439253 1 NC_011883.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2439253 tgt 7285742 tgt Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 queuine tRNA-ribosyltransferase YP_002480600.1 2438030 D 525146 CDS YP_002480601.1 220905289 7285743 2439700..2441358 1 NC_011883.1 KEGG: cti:RALTA_B1275 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2441358 7285743 Ddes_2027 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 gamma-glutamyltransferase YP_002480601.1 2439700 D 525146 CDS YP_002480602.1 220905290 7285744 complement(2441565..2441846) 1 NC_011883.1 KEGG: dvl:Dvul_1220 hypothetical protein; hypothetical protein 2441846 7285744 Ddes_2028 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480602.1 2441565 R 525146 CDS YP_002480603.1 220905291 7285745 complement(2441896..2442126) 1 NC_011883.1 hypothetical protein 2442126 7285745 Ddes_2029 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480603.1 2441896 R 525146 CDS YP_002480604.1 220905292 7285746 complement(2442277..2443809) 1 NC_011883.1 PFAM: Spermine synthase; KEGG: dvl:Dvul_2159 hypothetical protein; spermine synthase 2443809 7285746 Ddes_2030 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 spermine synthase YP_002480604.1 2442277 R 525146 CDS YP_002480605.1 220905293 7285747 complement(2443943..2444530) 1 NC_011883.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dvl:Dvul_1603 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase 2444530 7285747 Ddes_2031 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CMP/dCMP deaminase YP_002480605.1 2443943 R 525146 CDS YP_002480606.1 220905294 7285748 complement(2444539..2445207) 1 NC_011883.1 PFAM: conserved hypothetical protein; KEGG: dvl:Dvul_1602 hypothetical protein; hypothetical protein 2445207 7285748 Ddes_2032 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480606.1 2444539 R 525146 CDS YP_002480607.1 220905295 7285749 2445640..2447250 1 NC_011883.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dvl:Dvul_1601 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 2447250 7285749 Ddes_2033 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-lactamase domain-containing protein YP_002480607.1 2445640 D 525146 CDS YP_002480608.1 220905296 7285750 2447266..2447817 1 NC_011883.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: dvl:Dvul_1600 putative methyltransferase; methyltransferase 2447817 7285750 Ddes_2034 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyltransferase YP_002480608.1 2447266 D 525146 CDS YP_002480609.1 220905297 7285751 2447814..2448353 1 NC_011883.1 KEGG: dvl:Dvul_1599 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 2448353 7285751 Ddes_2035 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pantetheine-phosphate adenylyltransferase YP_002480609.1 2447814 D 525146 CDS YP_002480610.1 220905298 7285752 2448366..2449337 1 NC_011883.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2449337 miaA 7285752 miaA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002480610.1 2448366 D 525146 CDS YP_002480611.1 220905299 7285753 complement(2449642..2450343) 1 NC_011883.1 PFAM: carbonic anhydrase; KEGG: tdn:Suden_0162 carbonate dehydratase; carbonate dehydratase 2450343 7285753 Ddes_2037 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carbonate dehydratase YP_002480611.1 2449642 R 525146 CDS YP_002480612.1 220905300 7285754 2450830..2451810 1 NC_011883.1 PFAM: cytochrome c class III; KEGG: dvl:Dvul_2405 cytochrome c, class III; cytochrome c class III 2451810 7285754 Ddes_2038 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c class III YP_002480612.1 2450830 D 525146 CDS YP_002480613.1 220905301 7285755 2451824..2452927 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2406 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 2452927 7285755 Ddes_2039 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480613.1 2451824 D 525146 CDS YP_002480614.1 220905302 7285756 2452928..2454142 1 NC_011883.1 PFAM: Polysulphide reductase NrfD; KEGG: dvl:Dvul_2407 polysulphide reductase, NrfD; polysulfide reductase NrfD 2454142 7285756 Ddes_2040 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polysulfide reductase NrfD YP_002480614.1 2452928 D 525146 CDS YP_002480615.1 220905303 7285757 2454165..2454317 1 NC_011883.1 hypothetical protein 2454317 7285757 Ddes_2041 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480615.1 2454165 D 525146 CDS YP_002480616.1 220905304 7285758 2454868..2455638 1 NC_011883.1 hypothetical protein 2455638 7285758 Ddes_2042 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480616.1 2454868 D 525146 CDS YP_002480617.1 220905305 7285759 complement(2456114..2457346) 1 NC_011883.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 2457346 7285759 Ddes_2043 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diaminopropionate ammonia-lyase YP_002480617.1 2456114 R 525146 CDS YP_002480618.1 220905306 7285760 complement(2457736..2458740) 1 NC_011883.1 hypothetical protein 2458740 7285760 Ddes_2044 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480618.1 2457736 R 525146 CDS YP_002480619.1 220905307 7285761 complement(2458796..2459449) 1 NC_011883.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dvl:Dvul_2645 hydrolase; haloacid dehalogenase domain-containing protein hydrolase 2459449 7285761 Ddes_2045 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 haloacid dehalogenase domain-containing protein hydrolase YP_002480619.1 2458796 R 525146 CDS YP_002480620.1 220905308 7285762 complement(2459690..2460415) 1 NC_011883.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_2643 hexapaptide repeat-containing transferase; transferase hexapeptide repeat containing protein 2460415 7285762 Ddes_2046 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transferase hexapeptide repeat containing protein YP_002480620.1 2459690 R 525146 CDS YP_002480621.1 220905309 7285763 complement(2460418..2461188) 1 NC_011883.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2461188 7285763 Ddes_2047 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-deoxy-manno-octulosonate cytidylyltransferase YP_002480621.1 2460418 R 525146 CDS YP_002480622.1 220905310 7285764 complement(2461306..2462220) 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_2641 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2462220 7285764 Ddes_2048 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent epimerase/dehydratase YP_002480622.1 2461306 R 525146 CDS YP_002480623.1 220905311 7285765 complement(2462223..2463026) 1 NC_011883.1 PFAM: HpcH/HpaI aldolase; KEGG: dvl:Dvul_2640 2-dehydro-3-deoxyglucarate aldolase; HpcH/HpaI aldolase 2463026 7285765 Ddes_2049 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 HpcH/HpaI aldolase YP_002480623.1 2462223 R 525146 CDS YP_002480624.1 220905312 7285766 2463350..2465338 1 NC_011883.1 PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: dvl:Dvul_0382 molybdenum cofactor synthesis domain-containing protein; MoeA domain-containing protein domain I and II 2465338 7285766 Ddes_2050 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MoeA domain-containing protein domain I and II YP_002480624.1 2463350 D 525146 CDS YP_002480625.1 220905313 7285767 complement(2465430..2466638) 1 NC_011883.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cbh:CLC_1475 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 2466638 7285767 Ddes_2051 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 iron-containing alcohol dehydrogenase YP_002480625.1 2465430 R 525146 CDS YP_002480626.1 220905314 7285768 complement(2467322..2467750) 1 NC_011883.1 PFAM: TOBE domain protein; KEGG: pfl:PFL_3618 molybdenum-pterin-binding protein; TOBE domain-containing protein 2467750 7285768 Ddes_2052 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TOBE domain-containing protein YP_002480626.1 2467322 R 525146 CDS YP_002480627.1 220905315 7285769 complement(2468278..2468670) 1 NC_011883.1 KEGG: dvu:DVU2496 putative lipoprotein; hypothetical protein 2468670 7285769 Ddes_2053 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480627.1 2468278 R 525146 CDS YP_002480628.1 220905316 7285770 complement(2468730..2469590) 1 NC_011883.1 PFAM: peptidase M48 Ste24p; KEGG: dvl:Dvul_0750 peptidase M48, Ste24p; peptidase M48 Ste24p 2469590 7285770 Ddes_2054 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M48 Ste24p YP_002480628.1 2468730 R 525146 CDS YP_002480629.1 220905317 7285771 complement(2469892..2471832) 1 NC_011883.1 KEGG: hau:Haur_3584 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase 2471832 7285771 Ddes_2055 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 asparagine synthase YP_002480629.1 2469892 R 525146 CDS YP_002480630.1 220905318 7285772 complement(2471820..2473241) 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2261 glycosyl transferase, group 1; group 1 glycosyl transferase 2473241 7285772 Ddes_2056 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002480630.1 2471820 R 525146 CDS YP_002480631.1 220905319 7285773 complement(2473475..2474500) 1 NC_011883.1 KEGG: sfu:Sfum_2250 hypothetical protein; hypothetical protein 2474500 7285773 Ddes_2057 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480631.1 2473475 R 525146 CDS YP_002480632.1 220905320 7285774 complement(2474497..2475855) 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2261 glycosyl transferase, group 1; group 1 glycosyl transferase 2475855 7285774 Ddes_2058 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002480632.1 2474497 R 525146 CDS YP_002480633.1 220905321 7285775 complement(2475913..2477235) 1 NC_011883.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: neu:NE1388 aminotransferase class-I; glycine C-acetyltransferase 2477235 7285775 Ddes_2059 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine C-acetyltransferase YP_002480633.1 2475913 R 525146 CDS YP_002480634.1 220905322 7285776 complement(2477344..2477493) 1 NC_011883.1 hypothetical protein 2477493 7285776 Ddes_2060 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480634.1 2477344 R 525146 CDS YP_002480635.1 220905323 7285777 2477566..2481828 1 NC_011883.1 PFAM: Acyl transferase; KEGG: sco:SCO5892 polyketide synthase; acyl transferase 2481828 7285777 Ddes_2061 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acyl transferase YP_002480635.1 2477566 D 525146 CDS YP_002480636.1 220905324 7285778 2481897..2483363 1 NC_011883.1 KEGG: sfu:Sfum_2232 outer membrane efflux protein; Outer membrane protein-like protein 2483363 7285778 Ddes_2062 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Outer membrane protein-like protein YP_002480636.1 2481897 D 525146 CDS YP_002480637.1 220905325 7285779 2483363..2484307 1 NC_011883.1 KEGG: sfu:Sfum_2231 multidrug resistance efflux pump-like; hypothetical protein 2484307 7285779 Ddes_2063 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480637.1 2483363 D 525146 CDS YP_002480638.1 220905326 7285780 2484317..2485723 1 NC_011883.1 PFAM: polysaccharide biosynthesis protein; KEGG: sfu:Sfum_2260 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2485723 7285780 Ddes_2064 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polysaccharide biosynthesis protein YP_002480638.1 2484317 D 525146 CDS YP_002480639.1 220905327 7285781 2485967..2486965 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvu:DVU3143 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 2486965 7285781 Ddes_2065 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480639.1 2485967 D 525146 CDS YP_002480640.1 220905328 7285782 2486962..2487474 1 NC_011883.1 KEGG: dol:Dole_0301 hypothetical protein; hypothetical protein 2487474 7285782 Ddes_2066 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480640.1 2486962 D 525146 CDS YP_002480641.1 220905329 7285783 2487485..2488201 1 NC_011883.1 KEGG: bpm:BURPS1710b_2554 hypothetical protein; hypothetical protein 2488201 7285783 Ddes_2067 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480641.1 2487485 D 525146 CDS YP_002480642.1 220905330 7285784 complement(2488143..2489330) 1 NC_011883.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 2489330 argJ 7285784 argJ Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_002480642.1 2488143 R 525146 CDS YP_002480643.1 220905331 7285785 complement(2489647..2491725) 1 NC_011883.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2491725 7285785 Ddes_2069 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 elongation factor G YP_002480643.1 2489647 R 525146 CDS YP_002480644.1 220905332 7285786 complement(2491834..2492304) 1 NC_011883.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2492304 7285786 Ddes_2070 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S7 YP_002480644.1 2491834 R 525146 CDS YP_002480645.1 220905333 7285787 complement(2492418..2492789) 1 NC_011883.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2492789 rpsL 7285787 rpsL Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S12 YP_002480645.1 2492418 R 525146 CDS YP_002480646.1 220905334 7285788 complement(2492977..2493321) 1 NC_011883.1 PFAM: small multidrug resistance protein; KEGG: sml:Smlt3363 putative transmebrane small multidrug resistance transport protein; small multidrug resistance protein 2493321 7285788 Ddes_2072 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small multidrug resistance protein YP_002480646.1 2492977 R 525146 CDS YP_002480647.1 220905335 7285789 complement(2493547..2496213) 1 NC_011883.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2496213 valS 7285789 valS Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 valyl-tRNA synthetase YP_002480647.1 2493547 R 525146 CDS YP_002480648.1 220905336 7285790 2496252..2497727 1 NC_011883.1 KEGG: dvl:Dvul_2239 hypothetical protein; hypothetical protein 2497727 7285790 Ddes_2074 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480648.1 2496252 D 525146 CDS YP_002480649.1 220905337 7285791 2497771..2498484 1 NC_011883.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: dvl:Dvul_2078 lipoate-protein ligase B; lipoate-protein ligase B 2498484 7285791 Ddes_2075 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lipoate-protein ligase B YP_002480649.1 2497771 D 525146 CDS YP_002480650.1 220905338 7285792 2498481..2499380 1 NC_011883.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2499380 7285792 Ddes_2076 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lipoyl synthase YP_002480650.1 2498481 D 525146 CDS YP_002480651.1 220905339 7285793 complement(2499675..2500658) 1 NC_011883.1 PFAM: Auxin Efflux Carrier; KEGG: dvl:Dvul_1673 auxin efflux carrier; auxin efflux carrier 2500658 7285793 Ddes_2077 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 auxin efflux carrier YP_002480651.1 2499675 R 525146 CDS YP_002480652.1 220905340 7285794 complement(2501087..2501692) 1 NC_011883.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: dvl:Dvul_1594 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 2501692 7285794 Ddes_2078 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 outer membrane chaperone Skp YP_002480652.1 2501087 R 525146 CDS YP_002480653.1 220905341 7285795 complement(2502079..2503158) 1 NC_011883.1 PFAM: Lytic transglycosylase catalytic; KEGG: dvl:Dvul_1595 lytic transglycosylase, catalytic; lytic transglycosylase 2503158 7285795 Ddes_2079 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 lytic transglycosylase YP_002480653.1 2502079 R 525146 CDS YP_002480654.1 220905342 7285796 2503586..2504707 1 NC_011883.1 KEGG: dvl:Dvul_0756 hypothetical protein; hypothetical protein 2504707 7285796 Ddes_2080 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480654.1 2503586 D 525146 CDS YP_002480655.1 220905343 7285797 2504709..2506898 1 NC_011883.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: dvu:DVU0053 sulfate permease, putative; sulfate transporter 2506898 7285797 Ddes_2081 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfate transporter YP_002480655.1 2504709 D 525146 CDS YP_002480656.1 220905344 7285798 2507077..2508072 1 NC_011883.1 PFAM: dihydrouridine synthase DuS; KEGG: dvu:DVU0054 dihydrouridine synthase family protein; dihydrouridine synthase DuS 2508072 7285798 Ddes_2082 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydrouridine synthase DuS YP_002480656.1 2507077 D 525146 CDS YP_002480657.1 220905345 7285799 2508158..2509018 1 NC_011883.1 KEGG: dvl:Dvul_2906 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 2509018 7285799 Ddes_2083 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydroxymethylbutenyl pyrophosphate reductase YP_002480657.1 2508158 D 525146 CDS YP_002480658.1 220905346 7285800 2509055..2510065 1 NC_011883.1 PFAM: response regulator receiver; CheW domain protein; KEGG: dvl:Dvul_2905 putative CheW protein; response regulator receiver modulated CheW protein 2510065 7285800 Ddes_2084 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 response regulator receiver modulated CheW protein YP_002480658.1 2509055 D 525146 CDS YP_002480659.1 220905347 7285801 2510465..2511424 1 NC_011883.1 TIGRFAM: TonB family protein; KEGG: dvl:Dvul_2863 TonB family protein; TonB family protein 2511424 7285801 Ddes_2085 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TonB family protein YP_002480659.1 2510465 D 525146 CDS YP_002480660.1 220905348 7285802 2511707..2513680 1 NC_011883.1 TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: dvl:Dvul_2441 selenocysteine-specific translation elongation factor; selenocysteine-specific translation elongation factor 2513680 7285802 Ddes_2086 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 selenocysteine-specific translation elongation factor YP_002480660.1 2511707 D 525146 CDS YP_002480661.1 220905349 7285803 2514043..2515752 1 NC_011883.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dvl:Dvul_0176 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2515752 7285803 Ddes_2087 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002480661.1 2514043 D 525146 CDS YP_002480662.1 220905350 7285804 complement(2515972..2516409) 1 NC_011883.1 hypothetical protein 2516409 7285804 Ddes_2088 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480662.1 2515972 R 525146 CDS YP_002480663.1 220905351 7285805 2516499..2517695 1 NC_011883.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2517695 7285805 Ddes_2089 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate aminotransferase YP_002480663.1 2516499 D 525146 CDS YP_002480664.1 220905352 7285806 2517898..2518311 1 NC_011883.1 PFAM: Rhodanese domain protein; KEGG: det:DET1392 rhodanese-like domain-containing protein; rhodanese domain-containing protein 2518311 7285806 Ddes_2090 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rhodanese domain-containing protein YP_002480664.1 2517898 D 525146 CDS YP_002480665.1 220905353 7285807 2518398..2519897 1 NC_011883.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lip:LI0348 flagellar hook protein FlgE; hypothetical protein 2519897 7285807 Ddes_2091 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480665.1 2518398 D 525146 CDS YP_002480666.1 220905354 7285808 complement(2520029..2520700) 1 NC_011883.1 PFAM: cyclic nucleotide-binding; KEGG: dvl:Dvul_2554 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 2520700 7285808 Ddes_2092 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cyclic nucleotide-binding protein YP_002480666.1 2520029 R 525146 CDS YP_002480667.1 220905355 7285809 2520909..2522360 1 NC_011883.1 KEGG: drm:Dred_0607 hypothetical protein; hypothetical protein 2522360 7285809 Ddes_2093 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480667.1 2520909 D 525146 CDS YP_002480668.1 220905356 7285810 2522432..2523832 1 NC_011883.1 PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: drm:Dred_0362 sodium/sulphate symporter; sodium/sulfate symporter 2523832 7285810 Ddes_2094 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sodium/sulfate symporter YP_002480668.1 2522432 D 525146 CDS YP_002480669.1 220905357 7285811 2523879..2525468 1 NC_011883.1 KEGG: dvu:DVU0799 hypothetical protein; hypothetical protein 2525468 7285811 Ddes_2095 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480669.1 2523879 D 525146 CDS YP_002480670.1 220905358 7285812 2525904..2526830 1 NC_011883.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: ppd:Ppro_2359 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 2526830 7285812 Ddes_2096 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 shikimate 5-dehydrogenase YP_002480670.1 2525904 D 525146 CDS YP_002480671.1 220905359 7285813 2527114..2527575 1 NC_011883.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2527575 7285813 Ddes_2097 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-dehydroquinate dehydratase YP_002480671.1 2527114 D 525146 CDS YP_002480672.1 220905360 7285814 2527685..2528266 1 NC_011883.1 KEGG: dvl:Dvul_0826 heterodisulfide reductase, C subunit; heterodisulfide reductase subunit C 2528266 7285814 Ddes_2098 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heterodisulfide reductase subunit C YP_002480672.1 2527685 D 525146 CDS YP_002480673.1 220905361 7285815 2528263..2529183 1 NC_011883.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvl:Dvul_0827 CoB--CoM heterodisulfide reductase; CoB--CoM heterodisulfide reductase 2529183 7285815 Ddes_2099 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CoB--CoM heterodisulfide reductase YP_002480673.1 2528263 D 525146 CDS YP_002480674.1 220905362 7285816 2529180..2531141 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0828 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 2531141 7285816 Ddes_2100 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 4Fe-4S ferredoxin YP_002480674.1 2529180 D 525146 CDS YP_002480675.1 220905363 7285817 2531129..2532577 1 NC_011883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase delta subunit; KEGG: dvl:Dvul_0829 methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase delta subunit 2532577 7285817 Ddes_2101 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-viologen-reducing hydrogenase delta subunit YP_002480675.1 2531129 D 525146 CDS YP_002480676.1 220905364 7285818 2532574..2533647 1 NC_011883.1 KEGG: dvu:DVU2400 hydrogenase, putative; hydrogenase 2533647 7285818 Ddes_2102 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydrogenase YP_002480676.1 2532574 D 525146 CDS YP_002480677.1 220905365 7285819 2533809..2534669 1 NC_011883.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dvl:Dvul_0831 oxidoreductase FAD/NAD(P)-binding subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2534669 7285819 Ddes_2103 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_002480677.1 2533809 D 525146 CDS YP_002480678.1 220905366 7285820 2535561..2536145 1 NC_011883.1 KEGG: glo:Glov_0546 membrane protein-like protein; hypothetical protein 2536145 7285820 Ddes_2104 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480678.1 2535561 D 525146 CDS YP_002480679.1 220905367 7285821 2536149..2537537 1 NC_011883.1 PFAM: protein of unknown function DUF214; KEGG: dvu:DVU3323 ABC transporter, permease protein; hypothetical protein 2537537 7285821 Ddes_2105 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480679.1 2536149 D 525146 CDS YP_002480680.1 220905368 7285822 2537558..2538304 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU3324 ABC transporter, ATP-binding protein; ABC transporter-like protein 2538304 7285822 Ddes_2106 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480680.1 2537558 D 525146 CDS YP_002480681.1 220905369 7285823 2538301..2538840 1 NC_011883.1 hypothetical protein 2538840 7285823 Ddes_2107 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480681.1 2538301 D 525146 CDS YP_002480682.1 220905370 7285824 complement(2539005..2539535) 1 NC_011883.1 KEGG: sat:SYN_00794 phosphatidylserine/phosphatidylglycerophosphate related protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein 2539535 7285824 Ddes_2108 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein YP_002480682.1 2539005 R 525146 CDS YP_002480683.1 220905371 7285825 complement(2539808..2541286) 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_3089 ABC transporter related; ABC transporter-like protein 2541286 7285825 Ddes_2109 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480683.1 2539808 R 525146 CDS YP_002480684.1 220905372 7285826 complement(2541816..2543498) 1 NC_011883.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2543498 7285826 Ddes_2110 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydroxy-acid dehydratase YP_002480684.1 2541816 R 525146 CDS YP_002480685.1 220905373 7285827 2543713..2545263 1 NC_011883.1 PFAM: polysaccharide biosynthesis protein; KEGG: dvl:Dvul_2638 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2545263 7285827 Ddes_2111 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 polysaccharide biosynthesis protein YP_002480685.1 2543713 D 525146 CDS YP_002480686.1 220905374 7285828 complement(2545662..2547989) 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-4 domain protein; KEGG: dvl:Dvul_0960 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2547989 7285828 Ddes_2112 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002480686.1 2545662 R 525146 CDS YP_002480687.1 220905375 7285829 2548377..2548664 1 NC_011883.1 hypothetical protein 2548664 7285829 Ddes_2113 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480687.1 2548377 D 525146 CDS YP_002480688.1 220905376 7285830 2549493..2550710 1 NC_011883.1 PFAM: Extracellular ligand-binding receptor; KEGG: dvl:Dvul_0562 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2550710 7285830 Ddes_2114 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 extracellular ligand-binding receptor YP_002480688.1 2549493 D 525146 CDS YP_002480689.1 220905377 7285831 2550892..2551806 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: dvl:Dvul_0563 inner-membrane translocator; inner-membrane translocator 2551806 7285831 Ddes_2115 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002480689.1 2550892 D 525146 CDS YP_002480690.1 220905378 7285832 2551819..2552982 1 NC_011883.1 PFAM: inner-membrane translocator; KEGG: dvu:DVU2742 high-affinity branched chain amino acid ABC transporter, permease protein; inner-membrane translocator 2552982 7285832 Ddes_2116 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 inner-membrane translocator YP_002480690.1 2551819 D 525146 CDS YP_002480691.1 220905379 7285833 2553062..2553817 1 NC_011883.1 PFAM: ABC transporter related; KEGG: dvl:Dvul_0565 ABC transporter related; ABC transporter-like protein 2553817 7285833 Ddes_2117 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480691.1 2553062 D 525146 CDS YP_002480692.1 220905380 7285834 2553826..2554548 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_0566 ABC transporter related; ABC transporter-like protein 2554548 7285834 Ddes_2118 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480692.1 2553826 D 525146 CDS YP_002480693.1 220905381 7285835 2554920..2555324 1 NC_011883.1 KEGG: dvu:DVU1980 hypothetical protein; hypothetical protein 2555324 7285835 Ddes_2119 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480693.1 2554920 D 525146 CDS YP_002480694.1 220905382 7285836 2555514..2555933 1 NC_011883.1 PFAM: Calcium-binding EF-hand-containing protein; KEGG: dvl:Dvul_0821 calcium-binding EF-hand-containing protein; putative signal transduction protein with EFhand domain 2555933 7285836 Ddes_2120 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative signal transduction protein with EFhand domain YP_002480694.1 2555514 D 525146 CDS YP_002480695.1 220905383 7285837 2555923..2558163 1 NC_011883.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU2413 radical SAM domain-containing protein; radical SAM protein 2558163 7285837 Ddes_2121 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 radical SAM protein YP_002480695.1 2555923 D 525146 CDS YP_002480696.1 220905384 7285838 2558181..2558408 1 NC_011883.1 KEGG: dvl:Dvul_0814 SlyX family protein; SlyX family protein 2558408 7285838 Ddes_2122 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SlyX family protein YP_002480696.1 2558181 D 525146 CDS YP_002480697.1 220905385 7285839 2558430..2558876 1 NC_011883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppg:PputGB1_3592 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2558876 7285839 Ddes_2123 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002480697.1 2558430 D 525146 CDS YP_002480698.1 220905386 7285840 complement(2559486..2560211) 1 NC_011883.1 KEGG: dvl:Dvul_2132 hypothetical protein; hypothetical protein 2560211 7285840 Ddes_2124 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480698.1 2559486 R 525146 CDS YP_002480699.1 220905387 7285841 complement(2560320..2561501) 1 NC_011883.1 KEGG: dvl:Dvul_2133 heterodisulfide reductase, transmembrane subunit, putative; heterodisulfide reductase, transmembrane subunit 2561501 7285841 Ddes_2125 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heterodisulfide reductase, transmembrane subunit YP_002480699.1 2560320 R 525146 CDS YP_002480700.1 220905388 7285842 complement(2561515..2563785) 1 NC_011883.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase delta subunit; KEGG: dvu:DVU0849 heterodisulfide reductase, iron-sulfur-binding subunit, putative; methyl-viologen-reducing hydrogenase delta subunit 2563785 7285842 Ddes_2126 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-viologen-reducing hydrogenase delta subunit YP_002480700.1 2561515 R 525146 CDS YP_002480701.1 220905389 7285843 complement(2563791..2565026) 1 NC_011883.1 KEGG: dvu:DVU0848 heterodisulfide reductase, putative; heterodisulfide reductase 2565026 7285843 Ddes_2127 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heterodisulfide reductase YP_002480701.1 2563791 R 525146 CDS YP_002480702.1 220905390 7285844 2565276..2565410 1 NC_011883.1 hypothetical protein 2565410 7285844 Ddes_2128 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480702.1 2565276 D 525146 CDS YP_002480703.1 220905391 7285845 complement(2565407..2567395) 1 NC_011883.1 catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; adenylylsulfate reductase subunit alpha 2567395 7285845 Ddes_2129 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylylsulfate reductase subunit alpha YP_002480703.1 2565407 R 525146 CDS YP_002480704.1 220905392 7285846 complement(2567433..2567921) 1 NC_011883.1 TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2137 adenylylsulfate reductase, beta subunit; adenylylsulfate reductase subunit beta 2567921 7285846 Ddes_2130 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylylsulfate reductase subunit beta YP_002480704.1 2567433 R 525146 CDS YP_002480705.1 220905393 7285847 2568376..2570184 1 NC_011883.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: dvl:Dvul_2138 5-enolpyruvylshikimate-3-phosphate synthase-like protein; 3-phosphoshikimate 1-carboxyvinyltransferase 2570184 7285847 Ddes_2131 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-phosphoshikimate 1-carboxyvinyltransferase YP_002480705.1 2568376 D 525146 CDS YP_002480706.1 220905394 7285848 2570553..2571029 1 NC_011883.1 hypothetical protein 2571029 7285848 Ddes_2132 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480706.1 2570553 D 525146 CDS YP_002480707.1 220905395 7285849 complement(2571079..2571309) 1 NC_011883.1 hypothetical protein 2571309 7285849 Ddes_2133 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480707.1 2571079 R 525146 CDS YP_002480708.1 220905396 7285850 2571391..2571609 1 NC_011883.1 hypothetical protein 2571609 7285850 Ddes_2134 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480708.1 2571391 D 525146 CDS YP_002480709.1 220905397 7285851 complement(2572035..2572610) 1 NC_011883.1 KEGG: lip:LI1185 hypothetical protein; hypothetical protein 2572610 7285851 Ddes_2135 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480709.1 2572035 R 525146 CDS YP_002480710.1 220905398 7285852 complement(2573037..2574251) 1 NC_011883.1 KEGG: dvl:Dvul_1858 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2574251 7285852 Ddes_2136 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002480710.1 2573037 R 525146 CDS YP_002480711.1 220905399 7285853 complement(2574519..2575304) 1 NC_011883.1 KEGG: dvl:Dvul_2461 hypothetical protein; hypothetical protein 2575304 7285853 Ddes_2137 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480711.1 2574519 R 525146 CDS YP_002480712.1 220905400 7285854 complement(2575451..2578594) 1 NC_011883.1 PFAM: acriflavin resistance protein; KEGG: dvu:DVU0438 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 2578594 7285854 Ddes_2138 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acriflavin resistance protein YP_002480712.1 2575451 R 525146 CDS YP_002480713.1 220905401 7285855 complement(2578608..2579345) 1 NC_011883.1 PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A0917 hypothetical protein; hypothetical protein 2579345 7285855 Ddes_2139 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480713.1 2578608 R 525146 CDS YP_002480714.1 220905402 7285856 complement(2579508..2580662) 1 NC_011883.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: dvu:DVU2237 cobalamin biosynthesis protein CobD, putative; cobalamin biosynthesis protein CbiB 2580662 7285856 Ddes_2140 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobalamin biosynthesis protein CbiB YP_002480714.1 2579508 R 525146 CDS YP_002480715.1 220905403 7285857 complement(2580659..2581141) 1 NC_011883.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_1004 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 2581141 7285857 Ddes_2141 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 tRNA/rRNA methyltransferase SpoU YP_002480715.1 2580659 R 525146 CDS YP_002480716.1 220905404 7285858 complement(2581571..2583652) 1 NC_011883.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: dvl:Dvul_1002 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 2583652 7285858 Ddes_2142 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hydantoinase/oxoprolinase YP_002480716.1 2581571 R 525146 CDS YP_002480717.1 220905405 7285859 2583877..2584797 1 NC_011883.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2584797 7285859 Ddes_2143 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 branched-chain amino acid aminotransferase YP_002480717.1 2583877 D 525146 CDS YP_002480718.1 220905406 7285860 2584842..2587067 1 NC_011883.1 KEGG: dvl:Dvul_0189 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma/tau 2587067 7285860 Ddes_2144 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA polymerase III subunits gamma/tau YP_002480718.1 2584842 D 525146 CDS YP_002480719.1 220905407 7285861 2587248..2587469 1 NC_011883.1 hypothetical protein 2587469 7285861 Ddes_2145 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480719.1 2587248 D 525146 CDS YP_002480720.1 220905408 7285862 2587588..2587899 1 NC_011883.1 PFAM: conserved hypothetical protein; KEGG: dvu:DVU3199 hypothetical protein; hypothetical protein 2587899 7285862 Ddes_2146 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480720.1 2587588 D 525146 CDS YP_002480721.1 220905409 7285863 2587904..2588512 1 NC_011883.1 TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; KEGG: dvl:Dvul_0187 recombination protein RecR; recombination protein RecR 2588512 7285863 Ddes_2147 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 recombination protein RecR YP_002480721.1 2587904 D 525146 CDS YP_002480722.1 220905410 7285864 2588934..2589764 1 NC_011883.1 PFAM: zinc/iron permease; KEGG: dvl:Dvul_2882 zinc/iron permease; zinc/iron permease 2589764 7285864 Ddes_2148 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 zinc/iron permease YP_002480722.1 2588934 D 525146 CDS YP_002480723.1 220905411 7285865 2590341..2591924 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dvl:Dvul_1295 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2591924 7285865 Ddes_2149 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002480723.1 2590341 D 525146 CDS YP_002480724.1 220905412 7285866 complement(2592242..2593081) 1 NC_011883.1 KEGG: dol:Dole_3017 split soret cytochrome c precursor; split soret cytochrome c 2593081 7285866 Ddes_2150 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 split soret cytochrome c YP_002480724.1 2592242 R 525146 CDS YP_002480725.1 220905413 7285867 2593387..2595303 1 NC_011883.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2595303 dnaK 7285867 dnaK Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 molecular chaperone DnaK YP_002480725.1 2593387 D 525146 CDS YP_002480726.1 220905414 7285868 2595567..2596922 1 NC_011883.1 KEGG: dvl:Dvul_2167 hypothetical protein; hypothetical protein 2596922 7285868 Ddes_2152 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480726.1 2595567 D 525146 CDS YP_002480727.1 220905415 7285869 2597152..2597448 1 NC_011883.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: dvl:Dvul_2168 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 2597448 7285869 Ddes_2153 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glutamyl-tRNA(Gln) amidotransferase subunit C YP_002480727.1 2597152 D 525146 CDS YP_002480728.1 220905416 7285870 2597673..2599133 1 NC_011883.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2599133 gatA 7285870 gatA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002480728.1 2597673 D 525146 CDS YP_002480729.1 220905417 7285871 complement(2599518..2600798) 1 NC_011883.1 PFAM: protein of unknown function DUF1063; KEGG: bfr:BF3772 putative inner membrane protein; hypothetical protein 2600798 7285871 Ddes_2155 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480729.1 2599518 R 525146 CDS YP_002480730.1 220905418 7285872 complement(2600795..2602000) 1 NC_011883.1 PFAM: sodium:dicarboxylate symporter; KEGG: ctc:CTC02307 serine/threonine sodium symporter; sodium:dicarboxylate symporter 2602000 7285872 Ddes_2156 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sodium:dicarboxylate symporter YP_002480730.1 2600795 R 525146 CDS YP_002480731.1 220905419 7285873 2602065..2602358 1 NC_011883.1 hypothetical protein 2602358 7285873 Ddes_2157 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480731.1 2602065 D 525146 CDS YP_002480732.1 220905420 7285874 complement(2602378..2602692) 1 NC_011883.1 PFAM: small multidrug resistance protein; KEGG: dac:Daci_0685 small multidrug resistance protein; small multidrug resistance protein 2602692 7285874 Ddes_2158 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small multidrug resistance protein YP_002480732.1 2602378 R 525146 CDS YP_002480733.1 220905421 7285875 complement(2602917..2603816) 1 NC_011883.1 PFAM: Peptidase M23; KEGG: dvl:Dvul_0148 peptidase M23B; peptidase M23 2603816 7285875 Ddes_2159 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M23 YP_002480733.1 2602917 R 525146 CDS YP_002480734.1 220905422 7285876 complement(2603874..2604668) 1 NC_011883.1 PFAM: PP-loop domain protein; KEGG: dvl:Dvul_0147 PP-loop domain-containing protein; PP-loop domain-containing protein 2604668 7285876 Ddes_2160 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PP-loop domain-containing protein YP_002480734.1 2603874 R 525146 CDS YP_002480735.1 220905423 7285877 2604900..2605136 1 NC_011883.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: dvl:Dvul_0146 DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 2605136 7285877 Ddes_2161 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA-directed RNA polymerase subunit omega YP_002480735.1 2604900 D 525146 CDS YP_002480736.1 220905424 7285878 2605386..2606489 1 NC_011883.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2606489 7285878 Ddes_2162 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chaperone protein DnaJ YP_002480736.1 2605386 D 525146 CDS YP_002480737.1 220905425 7285879 complement(2607477..2609318) 1 NC_011883.1 PFAM: carbon starvation protein CstA; KEGG: gur:Gura_2790 carbon starvation protein CstA; carbon starvation protein CstA 2609318 7285879 Ddes_2163 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 carbon starvation protein CstA YP_002480737.1 2607477 R 525146 CDS YP_002480738.1 220905426 7285880 complement(2609358..2609516) 1 NC_011883.1 hypothetical protein 2609516 7285880 Ddes_2164 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480738.1 2609358 R 525146 CDS YP_002480739.1 220905427 7285881 2610136..2610336 1 NC_011883.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: rru:Rru_A2432 bifunctional sulfur carrier protein/thiazole synthase protein; thiamine biosynthesis protein ThiS 2610336 7285881 Ddes_2165 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiamine biosynthesis protein ThiS YP_002480739.1 2610136 D 525146 CDS YP_002480740.1 220905428 7285882 2610645..2611448 1 NC_011883.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 2611448 thiG 7285882 thiG Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiazole synthase YP_002480740.1 2610645 D 525146 CDS YP_002480741.1 220905429 7285883 2611459..2612583 1 NC_011883.1 TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; KEGG: dvu:DVU2093 thiamine biosynthesis protein ThiH; thiazole biosynthesis protein ThiH 2612583 7285883 Ddes_2167 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 thiazole biosynthesis protein ThiH YP_002480741.1 2611459 D 525146 CDS YP_002480742.1 220905430 7285884 2612585..2613229 1 NC_011883.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: dvl:Dvul_1138 thiamine biosynthesis protein ThiF; UBA/THIF-type NAD/FAD binding protein 2613229 7285884 Ddes_2168 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 UBA/THIF-type NAD/FAD binding protein YP_002480742.1 2612585 D 525146 CDS YP_002480743.1 220905431 7285885 complement(2613690..2615378) 1 NC_011883.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dvl:Dvul_0347 L-lactate transport; L-lactate transport protein 2615378 7285885 Ddes_2169 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 L-lactate transport protein YP_002480743.1 2613690 R 525146 CDS YP_002480744.1 220905432 7285886 complement(2615858..2617495) 1 NC_011883.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dvl:Dvul_0106 L-lactate transport; L-lactate transport protein 2617495 7285886 Ddes_2170 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 L-lactate transport protein YP_002480744.1 2615858 R 525146 CDS YP_002480745.1 220905433 7285887 complement(2617677..2618651) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_2885 glycosyl transferase family protein; family 2 glycosyl transferase 2618651 7285887 Ddes_2171 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002480745.1 2617677 R 525146 CDS YP_002480746.1 220905434 7285888 complement(2618648..2619169) 1 NC_011883.1 PFAM: GtrA family protein; KEGG: pzu:PHZ_c0184 GtrA-like protein; GtrA family protein 2619169 7285888 Ddes_2172 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GtrA family protein YP_002480746.1 2618648 R 525146 CDS YP_002480747.1 220905435 7285889 complement(2619166..2620122) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: gka:GK3091 glycosyltransferase; family 2 glycosyl transferase 2620122 7285889 Ddes_2173 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002480747.1 2619166 R 525146 CDS YP_002480748.1 220905436 7285890 complement(2620160..2621299) 1 NC_011883.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dvl:Dvul_2886 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2621299 7285890 Ddes_2174 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DegT/DnrJ/EryC1/StrS aminotransferase YP_002480748.1 2620160 R 525146 CDS YP_002480749.1 220905437 7285891 complement(2621888..2622388) 1 NC_011883.1 PFAM: CheW domain protein; KEGG: dvl:Dvul_1259 putative CheW protein; CheW protein 2622388 7285891 Ddes_2175 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 CheW protein YP_002480749.1 2621888 R 525146 CDS YP_002480750.1 220905438 7285892 complement(2622536..2625559) 1 NC_011883.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: syn:slr2104 two-component hybrid histidine kinase; Hpt sensor hybrid histidine kinase 2625559 7285892 Ddes_2176 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Hpt sensor hybrid histidine kinase YP_002480750.1 2622536 R 525146 CDS YP_002480751.1 220905439 7285893 complement(2625855..2627540) 1 NC_011883.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dvl:Dvul_2161 cobyric acid synthase CobQ; cobyric acid synthase CobQ 2627540 7285893 Ddes_2177 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobyric acid synthase CobQ YP_002480751.1 2625855 R 525146 CDS YP_002480752.1 220905440 7285894 2627782..2629869 1 NC_011883.1 PFAM: AsmA family protein; KEGG: lip:LI0358 AsmA protein; AsmA family protein 2629869 7285894 Ddes_2178 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AsmA family protein YP_002480752.1 2627782 D 525146 CDS YP_002480753.1 220905441 7285895 2630418..2631266 1 NC_011883.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 2631266 7285895 Ddes_2179 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellar motor protein MotA YP_002480753.1 2630418 D 525146 CDS YP_002480754.1 220905442 7285896 2631703..2632410 1 NC_011883.1 PFAM: OmpA/MotB domain protein; KEGG: dvl:Dvul_0641 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 2632410 7285896 Ddes_2180 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 OmpA/MotB domain-containing protein YP_002480754.1 2631703 D 525146 CDS YP_002480755.1 220905443 7285897 2632779..2633387 1 NC_011883.1 PFAM: shikimate kinase; KEGG: ppd:Ppro_2361 shikimate kinase II; shikimate kinase 2633387 7285897 Ddes_2181 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 shikimate kinase YP_002480755.1 2632779 D 525146 CDS YP_002480756.1 220905444 7285898 2633380..2634450 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_2831 glycosyl transferase family protein; family 2 glycosyl transferase 2634450 7285898 Ddes_2182 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002480756.1 2633380 D 525146 CDS YP_002480757.1 220905445 7285899 2634794..2635213 1 NC_011883.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dvl:Dvul_2190 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' 2635213 7285899 Ddes_2183 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 H+transporting two-sector ATPase subunit B/B' YP_002480757.1 2634794 D 525146 CDS YP_002480758.1 220905446 7285900 2635314..2635895 1 NC_011883.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dvl:Dvul_2191 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' 2635895 7285900 Ddes_2184 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 H+transporting two-sector ATPase subunit B/B' YP_002480758.1 2635314 D 525146 CDS YP_002480759.1 220905447 7285901 2635892..2636443 1 NC_011883.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 2636443 7285901 Ddes_2185 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 F0F1 ATP synthase subunit delta YP_002480759.1 2635892 D 525146 CDS YP_002480760.1 220905448 7285902 2636447..2637955 1 NC_011883.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2637955 7285902 Ddes_2186 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 F0F1 ATP synthase subunit alpha YP_002480760.1 2636447 D 525146 CDS YP_002480761.1 220905449 7285903 2637982..2638866 1 NC_011883.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2638866 7285903 Ddes_2187 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 F0F1 ATP synthase subunit gamma YP_002480761.1 2637982 D 525146 CDS YP_002480762.1 220905450 7285904 2638878..2640299 1 NC_011883.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 2640299 7285904 Ddes_2188 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 F0F1 ATP synthase subunit beta YP_002480762.1 2638878 D 525146 CDS YP_002480763.1 220905451 7285905 2640384..2640788 1 NC_011883.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: dvl:Dvul_2196 F0F1 ATP synthase subunit epsilon; ATP synthase F1 subunit epsilon 2640788 7285905 Ddes_2189 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP synthase F1 subunit epsilon YP_002480763.1 2640384 D 525146 CDS YP_002480764.1 220905452 7285906 complement(2641024..2641338) 1 NC_011883.1 PFAM: small multidrug resistance protein; KEGG: efa:EF0360 SugE protein; small multidrug resistance protein 2641338 7285906 Ddes_2190 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small multidrug resistance protein YP_002480764.1 2641024 R 525146 CDS YP_002480765.1 220905453 7285907 complement(2641340..2641651) 1 NC_011883.1 PFAM: small multidrug resistance protein; KEGG: esi:Exig_0410 small multidrug resistance protein; small multidrug resistance protein 2641651 7285907 Ddes_2191 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 small multidrug resistance protein YP_002480765.1 2641340 R 525146 CDS YP_002480766.1 220905454 7285908 complement(2641653..2642228) 1 NC_011883.1 PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_0286 TetR family transcriptional regulator; TetR family transcriptional regulator 2642228 7285908 Ddes_2192 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 TetR family transcriptional regulator YP_002480766.1 2641653 R 525146 CDS YP_002480767.1 220905455 7285909 2642472..2644277 1 NC_011883.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2644277 7285909 Ddes_2193 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTP-binding protein LepA YP_002480767.1 2642472 D 525146 CDS YP_002480768.1 220905456 7285910 complement(2644548..2644799) 1 NC_011883.1 hypothetical protein 2644799 7285910 Ddes_2194 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480768.1 2644548 R 525146 CDS YP_002480769.1 220905457 7285911 complement(2645062..2646087) 1 NC_011883.1 KEGG: dvl:Dvul_0119 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II 2646087 7285911 Ddes_2195 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome d ubiquinol oxidase, subunit II YP_002480769.1 2645062 R 525146 CDS YP_002480770.1 220905458 7285912 complement(2646090..2647406) 1 NC_011883.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dvl:Dvul_0118 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 2647406 7285912 Ddes_2196 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome bd ubiquinol oxidase subunit I YP_002480770.1 2646090 R 525146 CDS YP_002480771.1 220905459 7285913 2647648..2649630 1 NC_011883.1 molecular chaperone; heat shock protein 90 2649630 7285913 Ddes_2197 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heat shock protein 90 YP_002480771.1 2647648 D 525146 CDS YP_002480772.1 220905460 7285914 complement(2649929..2651002) 1 NC_011883.1 PFAM: creatinase; peptidase M24; KEGG: dvl:Dvul_2684 peptidase M24; peptidase M24 2651002 7285914 Ddes_2198 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptidase M24 YP_002480772.1 2649929 R 525146 CDS YP_002480773.1 220905461 7285915 2651228..2652037 1 NC_011883.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dvl:Dvul_0073 oxidoreductase FAD-binding subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2652037 7285915 Ddes_2199 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_002480773.1 2651228 D 525146 CDS YP_002480774.1 220905462 7285916 2652719..2653645 1 NC_011883.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: dvl:Dvul_0072 dihydroorotate dehydrogenase family protein; dihydroorotate dehydrogenase family protein 2653645 7285916 Ddes_2200 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydroorotate dehydrogenase family protein YP_002480774.1 2652719 D 525146 CDS YP_002480775.1 220905463 7285917 2653649..2654779 1 NC_011883.1 KEGG: mxa:MXAN_3747 hypothetical protein; hypothetical protein 2654779 7285917 Ddes_2201 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480775.1 2653649 D 525146 CDS YP_002480776.1 220905464 7285918 2654776..2656011 1 NC_011883.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mxa:MXAN_3746 oxidoreductase, short chain dehydrogenase/reductase family; NAD-dependent epimerase/dehydratase 2656011 7285918 Ddes_2202 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NAD-dependent epimerase/dehydratase YP_002480776.1 2654776 D 525146 CDS YP_002480777.1 220905465 7285919 2656008..2658017 1 NC_011883.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU3052 ABC transporter, ATP-binding protein; ABC transporter-like protein 2658017 7285919 Ddes_2203 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ABC transporter-like protein YP_002480777.1 2656008 D 525146 CDS YP_002480778.1 220905466 7285920 2658225..2658650 1 NC_011883.1 PFAM: NUDIX hydrolase; KEGG: dvl:Dvul_0325 NUDIX hydrolase; NUDIX hydrolase 2658650 7285920 Ddes_2204 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 NUDIX hydrolase YP_002480778.1 2658225 D 525146 CDS YP_002480779.1 220905467 7285921 complement(2658863..2660317) 1 NC_011883.1 KEGG: dvl:Dvul_0319 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 2660317 7285921 Ddes_2205 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 oxygen-independent coproporphyrinogen III oxidase YP_002480779.1 2658863 R 525146 CDS YP_002480780.1 220905468 7285922 2660606..2662111 1 NC_011883.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: dvl:Dvul_2519 leucyl aminopeptidase; leucyl aminopeptidase 2662111 7285922 Ddes_2206 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 leucyl aminopeptidase YP_002480780.1 2660606 D 525146 CDS YP_002480781.1 220905469 7285923 2662111..2663634 1 NC_011883.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dvl:Dvul_2236 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2663634 7285923 Ddes_2207 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 uroporphyrin-III C-methyltransferase YP_002480781.1 2662111 D 525146 CDS YP_002480782.1 220905470 7285924 2663815..2664489 1 NC_011883.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: dvl:Dvul_2234 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 2664489 7285924 Ddes_2208 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylglycinamide formyltransferase YP_002480782.1 2663815 D 525146 CDS YP_002480783.1 220905471 7285925 complement(2664775..2665461) 1 NC_011883.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: dvl:Dvul_2634 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 2665461 7285925 Ddes_2209 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 acylneuraminate cytidylyltransferase YP_002480783.1 2664775 R 525146 CDS YP_002480784.1 220905472 7285926 complement(2665458..2665700) 1 NC_011883.1 hypothetical protein 2665700 7285926 Ddes_2210 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480784.1 2665458 R 525146 CDS YP_002480785.1 220905473 7285927 complement(2665762..2667393) 1 NC_011883.1 KEGG: dvl:Dvul_2633 cytidine 5'monophosphate N-acetylneuraminic acid synthetase; cytidine 5'monophosphate N-acetylneuraminic acid synthetase 2667393 7285927 Ddes_2211 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytidine 5'monophosphate N-acetylneuraminic acid synthetase YP_002480785.1 2665762 R 525146 CDS YP_002480786.1 220905474 7285928 complement(2667594..2668781) 1 NC_011883.1 PFAM: aminotransferase class V; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvl:Dvul_2632 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2668781 7285928 Ddes_2212 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DegT/DnrJ/EryC1/StrS aminotransferase YP_002480786.1 2667594 R 525146 CDS YP_002480787.1 220905475 7285929 complement(2669108..2670187) 1 NC_011883.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dvl:Dvul_2631 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2670187 7285929 Ddes_2213 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 iron-containing alcohol dehydrogenase YP_002480787.1 2669108 R 525146 CDS YP_002480788.1 220905476 7285930 complement(2670302..2670949) 1 NC_011883.1 PFAM: protein of unknown function DUF805; KEGG: stp:Strop_0111 hypothetical protein; hypothetical protein 2670949 7285930 Ddes_2214 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480788.1 2670302 R 525146 CDS YP_002480789.1 220905477 7285931 complement(2671035..2671892) 1 NC_011883.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2671892 7285931 Ddes_2215 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002480789.1 2671035 R 525146 CDS YP_002480790.1 220905478 7285932 complement(2672239..2673537) 1 NC_011883.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2673537 eno 7285932 eno Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphopyruvate hydratase YP_002480790.1 2672239 R 525146 CDS YP_002480791.1 220905479 7285933 complement(2673814..2674605) 1 NC_011883.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 2674605 7285933 Ddes_2217 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pantothenate kinase YP_002480791.1 2673814 R 525146 CDS YP_002480792.1 220905480 7285934 complement(2674829..2676610) 1 NC_011883.1 KEGG: ppf:Pput_3103 hypothetical protein; hypothetical protein 2676610 7285934 Ddes_2218 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480792.1 2674829 R 525146 CDS YP_002480793.1 220905481 7285935 complement(2676637..2677620) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: pfo:Pfl01_1379 glycosyl transferase family protein; family 2 glycosyl transferase 2677620 7285935 Ddes_2219 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002480793.1 2676637 R 525146 CDS YP_002480794.1 220905482 7285936 complement(2677910..2678929) 1 NC_011883.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pmr:PMI2164 mechanosensitive ion channel protein; mechanosensitive ion channel MscS 2678929 7285936 Ddes_2220 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 mechanosensitive ion channel MscS YP_002480794.1 2677910 R 525146 CDS YP_002480795.1 220905483 7285937 complement(2679532..2679831) 1 NC_011883.1 hypothetical protein 2679831 7285937 Ddes_2221 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480795.1 2679532 R 525146 CDS YP_002480796.1 220905484 7285938 complement(2679840..2680154) 1 NC_011883.1 KEGG: rpr:RP723 hypothetical protein; hypothetical protein 2680154 7285938 Ddes_2222 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480796.1 2679840 R 525146 CDS YP_002480797.1 220905485 7285939 2680380..2680685 1 NC_011883.1 KEGG: dsy:DSY0287 hypothetical protein; hypothetical protein 2680685 7285939 Ddes_2223 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480797.1 2680380 D 525146 CDS YP_002480798.1 220905486 7285940 complement(2680874..2682688) 1 NC_011883.1 PFAM: K potassium transporter; KEGG: mac:MA3179 potassium uptake protein Kup; K potassium transporter 2682688 7285940 Ddes_2224 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 K potassium transporter YP_002480798.1 2680874 R 525146 CDS YP_002480799.1 220905487 7285941 complement(2683026..2683379) 1 NC_011883.1 PFAM: protein of unknown function DUF488; KEGG: mem:Memar_1211 hypothetical protein; hypothetical protein 2683379 7285941 Ddes_2225 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480799.1 2683026 R 525146 CDS YP_002480800.1 220905488 7285942 complement(2683585..2684775) 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd1364 sugar efflux transporter; sugar efflux transporter 2684775 7285942 Ddes_2226 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sugar efflux transporter YP_002480800.1 2683585 R 525146 CDS YP_002480801.1 220905489 7285943 2685449..2687269 1 NC_011883.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: lip:LIC103 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2687269 7285943 Ddes_2227 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 methyl-accepting chemotaxis sensory transducer YP_002480801.1 2685449 D 525146 CDS YP_002480802.1 220905490 7285944 2687724..2687990 1 NC_011883.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA; transposase IS3/IS911 family protein 2687990 7285944 Ddes_2228 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transposase IS3/IS911 family protein YP_002480802.1 2687724 D 525146 CDS YP_002480803.1 220905491 7285945 2688047..2688835 1 NC_011883.1 PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit; integrase catalytic subunit 2688835 7285945 Ddes_2229 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase catalytic subunit YP_002480803.1 2688047 D 525146 CDS YP_002480804.1 220905492 7285946 complement(2689326..2690030) 1 NC_011883.1 KEGG: dps:DP0413 hypothetical protein; hypothetical protein 2690030 7285946 Ddes_2230 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480804.1 2689326 R 525146 CDS YP_002480805.1 220905493 7285947 complement(2690030..2692138) 1 NC_011883.1 KEGG: dps:DP0414 hypothetical protein; hypothetical protein 2692138 7285947 Ddes_2231 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480805.1 2690030 R 525146 CDS YP_002480806.1 220905494 7285948 complement(2692461..2693054) 1 NC_011883.1 PFAM: integrase family protein; KEGG: nth:Nther_2955 integrase family protein; integrase family protein 2693054 7285948 Ddes_2232 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase family protein YP_002480806.1 2692461 R 525146 CDS YP_002480807.1 220905495 7285949 complement(2694115..2694438) 1 NC_011883.1 PFAM: helix-turn-helix domain protein; KEGG: cac:CAC1578 transcriptional regulator; XRE family transcriptional regulator 2694438 7285949 Ddes_2233 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002480807.1 2694115 R 525146 CDS YP_002480808.1 220905496 7285950 2694636..2694965 1 NC_011883.1 hypothetical protein 2694965 7285950 Ddes_2234 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480808.1 2694636 D 525146 CDS YP_002480809.1 220905497 7285951 2695025..2696605 1 NC_011883.1 KEGG: met:M446_6918 hypothetical protein; hypothetical protein 2696605 7285951 Ddes_2235 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480809.1 2695025 D 525146 CDS YP_002480810.1 220905498 7285952 complement(2696622..2697644) 1 NC_011883.1 PFAM: integrase family protein; KEGG: dvl:Dvul_1487 phage integrase family protein; integrase family protein 2697644 7285952 Ddes_2236 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase family protein YP_002480810.1 2696622 R 525146 CDS YP_002480811.1 220905499 7285953 complement(2697644..2697856) 1 NC_011883.1 KEGG: dvl:Dvul_2781 hypothetical protein; hypothetical protein 2697856 7285953 Ddes_2237 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480811.1 2697644 R 525146 CDS YP_002480812.1 220905500 7285954 2698202..2698798 1 NC_011883.1 hypothetical protein 2698798 7285954 Ddes_2238 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480812.1 2698202 D 525146 CDS YP_002480813.1 220905501 7285956 2700356..2700949 1 NC_011883.1 PFAM: integrase family protein; KEGG: nth:Nther_2955 integrase family protein; integrase family protein 2700949 7285956 Ddes_2240 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase family protein YP_002480813.1 2700356 D 525146 CDS YP_002480814.1 220905502 7285957 complement(2701165..2701488) 1 NC_011883.1 hypothetical protein 2701488 7285957 Ddes_2241 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480814.1 2701165 R 525146 CDS YP_002480815.1 220905503 7285958 2702041..2702646 1 NC_011883.1 KEGG: hch:HCH_10009 BamHI-like type II restriction endonuclease; BamHI-like type II restriction endonuclease 2702646 7285958 Ddes_2242 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 BamHI-like type II restriction endonuclease YP_002480815.1 2702041 D 525146 CDS YP_002480816.1 220905504 7285959 complement(2702638..2703495) 1 NC_011883.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: dol:Dole_0939 DNA methylase N-4/N-6 domain-containing protein; DNA methylase N-4/N-6 domain-containing protein 2703495 7285959 Ddes_2243 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA methylase N-4/N-6 domain-containing protein YP_002480816.1 2702638 R 525146 CDS YP_002480817.1 220905505 7285960 2704117..2704440 1 NC_011883.1 hypothetical protein 2704440 7285960 Ddes_2244 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480817.1 2704117 D 525146 CDS YP_002480818.1 220905506 7285962 complement(2704779..2705972) 1 NC_011883.1 PFAM: aminotransferase class I and II; KEGG: dvu:DVU3223 aspartate aminotransferase; class I and II aminotransferase 2705972 7285962 Ddes_2245 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 class I and II aminotransferase YP_002480818.1 2704779 R 525146 CDS YP_002480819.1 220905507 7285963 2706253..2707059 1 NC_011883.1 PFAM: sugar fermentation stimulation protein; KEGG: dvl:Dvul_0164 sugar fermentation stimulation protein; sugar fermentation stimulation protein 2707059 7285963 Ddes_2246 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sugar fermentation stimulation protein YP_002480819.1 2706253 D 525146 CDS YP_002480820.1 220905508 7285964 complement(2707554..2708864) 1 NC_011883.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 2708864 7285964 Ddes_2247 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 gamma-glutamyl kinase YP_002480820.1 2707554 R 525146 CDS YP_002480821.1 220905509 7285965 complement(2708882..2709982) 1 NC_011883.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 2709982 obgE 7285965 obgE Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 GTPase ObgE YP_002480821.1 2708882 R 525146 CDS YP_002480822.1 220905510 7285966 complement(2710120..2710389) 1 NC_011883.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 2710389 rpmA 7285966 rpmA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L27 YP_002480822.1 2710120 R 525146 CDS YP_002480823.1 220905511 7285967 complement(2710535..2710843) 1 NC_011883.1 PFAM: ribosomal protein L21; KEGG: dvl:Dvul_2058 50S ribosomal protein L21; 50S ribosomal protein L21 2710843 rplU 7285967 rplU Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L21 YP_002480823.1 2710535 R 525146 CDS YP_002480824.1 220905512 7285968 2711111..2712763 1 NC_011883.1 PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; Protein of unknown function methylase putative; KEGG: dvl:Dvul_2060 RNA methyltransferase; (uracil-5)-methyltransferase 2712763 7285968 Ddes_2251 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 (uracil-5)-methyltransferase YP_002480824.1 2711111 D 525146 CDS YP_002480825.1 220905513 7285969 2712923..2713279 1 NC_011883.1 KEGG: dvl:Dvul_2064 ATP synthase protein I; hypothetical protein 2713279 7285969 Ddes_2252 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480825.1 2712923 D 525146 CDS YP_002480826.1 220905514 7285970 2713239..2713682 1 NC_011883.1 KEGG: dvl:Dvul_2065 hypothetical protein; hypothetical protein 2713682 7285970 Ddes_2253 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480826.1 2713239 D 525146 CDS YP_002480827.1 220905515 7285971 2713972..2714676 1 NC_011883.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: dvl:Dvul_2066 ATP synthase F0, A subunit; ATP synthase F0 subunit A 2714676 7285971 Ddes_2254 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP synthase F0 subunit A YP_002480827.1 2713972 D 525146 CDS YP_002480828.1 220905516 7285972 2714812..2715135 1 NC_011883.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: dvl:Dvul_2067 ATP synthase F0, C subunit; ATP synthase F0 subunit C 2715135 7285972 Ddes_2255 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP synthase F0 subunit C YP_002480828.1 2714812 D 525146 CDS YP_002480829.1 220905517 7285973 2715817..2716029 1 NC_011883.1 hypothetical protein 2716029 7285973 Ddes_2256 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480829.1 2715817 D 525146 CDS YP_002480830.1 220905518 7285974 2716454..2717095 1 NC_011883.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 2717095 7285974 Ddes_2257 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 redox-sensing transcriptional repressor Rex YP_002480830.1 2716454 D 525146 CDS YP_002480831.1 220905519 7285975 2717106..2717903 1 NC_011883.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dvl:Dvul_2070 cobalamin-5-phosphate synthase CobS; cobalamin-5-phosphate synthase CobS 2717903 7285975 Ddes_2258 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobalamin-5-phosphate synthase CobS YP_002480831.1 2717106 D 525146 CDS YP_002480832.1 220905520 7285976 2718082..2718660 1 NC_011883.1 PFAM: nitroreductase; KEGG: dvu:DVU1617 nitroreductase family protein; nitroreductase 2718660 7285976 Ddes_2259 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 nitroreductase YP_002480832.1 2718082 D 525146 CDS YP_002480833.1 220905521 7285977 complement(2718752..2719108) 1 NC_011883.1 hypothetical protein 2719108 7285977 Ddes_2260 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480833.1 2718752 R 525146 CDS YP_002480834.1 220905522 7285978 complement(2719436..2720728) 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cbk:CLL_A2804 putative signaling protein; diguanylate cyclase 2720728 7285978 Ddes_2261 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase YP_002480834.1 2719436 R 525146 CDS YP_002480835.1 220905523 7285979 complement(2721228..2722463) 1 NC_011883.1 PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_0907 glycosyl transferase family protein; family 2 glycosyl transferase 2722463 7285979 Ddes_2262 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 family 2 glycosyl transferase YP_002480835.1 2721228 R 525146 CDS YP_002480836.1 220905524 7285980 complement(2722456..2724243) 1 NC_011883.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dvu:DVU0405 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 2724243 7285980 Ddes_2263 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cobyrinic acid a,c-diamide synthase YP_002480836.1 2722456 R 525146 CDS YP_002480837.1 220905525 7285981 complement(2724566..2725843) 1 NC_011883.1 PFAM: AICARFT/IMPCHase bienzyme formylation region; KEGG: dvu:DVU3206 phosphoribosylaminoimidazolecarboxamide formyltransferase, putative; phosphoribosylaminoimidazolecarboxamide formyltransferase 2725843 7285981 Ddes_2264 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylaminoimidazolecarboxamide formyltransferase YP_002480837.1 2724566 R 525146 CDS YP_002480838.1 220905526 7285982 2726073..2726423 1 NC_011883.1 KEGG: dvl:Dvul_0181 hypothetical protein; hypothetical protein 2726423 7285982 Ddes_2265 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480838.1 2726073 D 525146 CDS YP_002480839.1 220905527 7285983 2726720..2727997 1 NC_011883.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2727997 7285983 Ddes_2266 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 adenylosuccinate synthetase YP_002480839.1 2726720 D 525146 CDS YP_002480840.1 220905528 7285984 2728012..2728953 1 NC_011883.1 KEGG: dvu:DVU3203 DNA polymerase III, delta prime subunit, putative; DNA polymerase III subunit delta' 2728953 7285984 Ddes_2267 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA polymerase III subunit delta' YP_002480840.1 2728012 D 525146 CDS YP_002480841.1 220905529 7285985 2729053..2731986 1 NC_011883.1 KEGG: cbk:CLL_A2232 diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2731986 7285985 Ddes_2268 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PAS/PAC sensor-containing diguanylate cyclase YP_002480841.1 2729053 D 525146 CDS YP_002480842.1 220905530 7285986 complement(2732199..2732675) 1 NC_011883.1 KEGG: dvu:DVU0741 hypothetical protein; hypothetical protein 2732675 7285986 Ddes_2269 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480842.1 2732199 R 525146 CDS YP_002480843.1 220905531 7285987 2732909..2733700 1 NC_011883.1 PFAM: Methyltransferase type 12; KEGG: kra:Krad_2590 methyltransferase type 11; type 12 methyltransferase 2733700 7285987 Ddes_2270 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type 12 methyltransferase YP_002480843.1 2732909 D 525146 CDS YP_002480844.1 220905532 7285988 complement(2733888..2735327) 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cti:RALTA_B1268 putative sensor signal transduction histidine kinase; histidine kinase 2735327 7285988 Ddes_2271 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 histidine kinase YP_002480844.1 2733888 R 525146 CDS YP_002480845.1 220905533 7285989 complement(2735324..2736046) 1 NC_011883.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eba:ebA4468 DNA-binding response regulator OmpR; winged helix family two component transcriptional regulator 2736046 7285989 Ddes_2272 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 winged helix family two component transcriptional regulator YP_002480845.1 2735324 R 525146 CDS YP_002480846.1 220905534 7285990 2736247..2737611 1 NC_011883.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 2737611 asnC 7285990 asnC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 asparaginyl-tRNA synthetase YP_002480846.1 2736247 D 525146 CDS YP_002480847.1 220905535 7285991 2738098..2739144 1 NC_011883.1 KEGG: dvl:Dvul_0328 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; aspartate-semialdehyde dehydrogenase 2739144 7285991 Ddes_2274 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 aspartate-semialdehyde dehydrogenase YP_002480847.1 2738098 D 525146 CDS YP_002480848.1 220905536 7285992 2739210..2740172 1 NC_011883.1 PFAM: aminotransferase class IV; KEGG: dvl:Dvul_0329 aminotransferase, class IV; class IV aminotransferase 2740172 7285992 Ddes_2275 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 class IV aminotransferase YP_002480848.1 2739210 D 525146 CDS YP_002480849.1 220905537 7285993 2740172..2741515 1 NC_011883.1 PFAM: glycosyl transferase group 1; KEGG: lip:LI0948 glycosyltransferase; group 1 glycosyl transferase 2741515 7285993 Ddes_2276 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 group 1 glycosyl transferase YP_002480849.1 2740172 D 525146 CDS YP_002480850.1 220905538 7285994 2741576..2742487 1 NC_011883.1 PFAM: PP-loop domain protein; KEGG: dvl:Dvul_2830 PP-loop domain-containing protein; PP-loop domain-containing protein 2742487 7285994 Ddes_2277 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PP-loop domain-containing protein YP_002480850.1 2741576 D 525146 CDS YP_002480851.1 220905539 7285996 2743146..2743802 1 NC_011883.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: dvl:Dvul_0082 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2743802 7285996 Ddes_2278 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002480851.1 2743146 D 525146 CDS YP_002480852.1 220905540 7285997 2743988..2744680 1 NC_011883.1 PFAM: beta-lactamase domain protein; KEGG: dvu:DVU3308 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 2744680 7285997 Ddes_2279 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 beta-lactamase domain-containing protein YP_002480852.1 2743988 D 525146 CDS YP_002480853.1 220905541 7285998 complement(2744821..2745708) 1 NC_011883.1 PFAM: flagellin domain protein; KEGG: dvl:Dvul_0790 flagellin domain-containing protein; flagellin domain-containing protein 2745708 7285998 Ddes_2280 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellin domain-containing protein YP_002480853.1 2744821 R 525146 CDS YP_002480854.1 220905542 7285999 complement(2746158..2746679) 1 NC_011883.1 PFAM: heat shock protein Hsp20; KEGG: lpn:lpg2192 small HspC2 heat shock protein; heat shock protein Hsp20 2746679 7285999 Ddes_2281 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heat shock protein Hsp20 YP_002480854.1 2746158 R 525146 CDS YP_002480855.1 220905543 7286000 2747091..2747978 1 NC_011883.1 PFAM: flagellin domain protein; KEGG: dvl:Dvul_0790 flagellin domain-containing protein; flagellin domain-containing protein 2747978 7286000 Ddes_2282 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 flagellin domain-containing protein YP_002480855.1 2747091 D 525146 CDS YP_002480856.1 220905544 7286001 complement(2748319..2749647) 1 NC_011883.1 KEGG: dvu:DVU3151 putative tRNA modifying protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 2749647 7286001 Ddes_2283 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 MiaB-like tRNA modifying protein YliG YP_002480856.1 2748319 R 525146 CDS YP_002480857.1 220905545 7286002 2749785..2752034 1 NC_011883.1 KEGG: cdf:CD0522 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase 2752034 7286002 Ddes_2284 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase/phosphodiesterase YP_002480857.1 2749785 D 525146 CDS YP_002480858.1 220905546 7286003 complement(2752264..2752833) 1 NC_011883.1 KEGG: dvu:DVU2447 hypothetical protein; hypothetical protein 2752833 7286003 Ddes_2285 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480858.1 2752264 R 525146 CDS YP_002480859.1 220905547 7286004 2753037..2753885 1 NC_011883.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2753885 panC 7286004 panC Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 pantoate--beta-alanine ligase YP_002480859.1 2753037 D 525146 CDS YP_002480860.1 220905548 7286005 2753925..2755097 1 NC_011883.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2755097 7286005 Ddes_2287 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 S-adenosylmethionine synthetase YP_002480860.1 2753925 D 525146 CDS YP_002480861.1 220905549 7286006 2755495..2756589 1 NC_011883.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2756589 7286006 Ddes_2288 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chorismate synthase YP_002480861.1 2755495 D 525146 CDS YP_002480862.1 220905550 7286007 2756605..2758854 1 NC_011883.1 KEGG: dvl:Dvul_2089 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: AAA ATPase; helicase, RecD/TraA family 2758854 7286007 Ddes_2289 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 helicase, RecD/TraA family YP_002480862.1 2756605 D 525146 CDS YP_002480863.1 220905551 7286008 complement(2759016..2759687) 1 NC_011883.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: asa:ASA_1293 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2759687 7286008 Ddes_2290 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002480863.1 2759016 R 525146 CDS YP_002480864.1 220905552 7286009 2759988..2760506 1 NC_011883.1 hypothetical protein 2760506 7286009 Ddes_2291 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480864.1 2759988 D 525146 CDS YP_002480865.1 220905553 7286010 complement(2760383..2760958) 1 NC_011883.1 PFAM: AMMECR1 domain protein; KEGG: dvl:Dvul_2231 AMMECR1 domain-containing protein; AMMECR1 domain-containing protein 2760958 7286010 Ddes_2292 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AMMECR1 domain-containing protein YP_002480865.1 2760383 R 525146 CDS YP_002480866.1 220905554 7286011 complement(2761230..2761466) 1 NC_011883.1 PFAM: Dissimilatory sulfite reductase D; KEGG: dvl:Dvul_2530 dissimilatory sulfite reductase B; dissimilatory sulfite reductase D 2761466 7286011 Ddes_2293 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dissimilatory sulfite reductase D YP_002480866.1 2761230 R 525146 CDS YP_002480867.1 220905555 7286012 complement(2761523..2762668) 1 NC_011883.1 KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type beta subunit 2762668 7286012 Ddes_2294 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfite reductase, dissimilatory-type beta subunit YP_002480867.1 2761523 R 525146 CDS YP_002480868.1 220905556 7286013 complement(2762687..2764000) 1 NC_011883.1 KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type alpha subunit 2764000 7286013 Ddes_2295 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 sulfite reductase, dissimilatory-type alpha subunit YP_002480868.1 2762687 R 525146 CDS YP_002480869.1 220905557 7286014 2764559..2764828 1 NC_011883.1 KEGG: dvl:Dvul_2533 hypothetical protein; hypothetical protein 2764828 7286014 Ddes_2296 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480869.1 2764559 D 525146 CDS YP_002480870.1 220905558 7286015 2764825..2765841 1 NC_011883.1 KEGG: dvl:Dvul_2535 hypothetical protein; hypothetical protein 2765841 7286015 Ddes_2297 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480870.1 2764825 D 525146 CDS YP_002480871.1 220905559 7286016 2765838..2766554 1 NC_011883.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: dvl:Dvul_2537 rare lipoprotein A; rare lipoprotein A 2766554 7286016 Ddes_2298 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 rare lipoprotein A YP_002480871.1 2765838 D 525146 CDS YP_002480872.1 220905560 7286017 complement(2766784..2767854) 1 NC_011883.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2767854 prfA 7286017 prfA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 peptide chain release factor 1 YP_002480872.1 2766784 R 525146 CDS YP_002480873.1 220905561 7286018 complement(2768068..2768982) 1 NC_011883.1 PFAM: protein of unknown function DUF1385; KEGG: dvl:Dvul_0452 putative lipoprotein; hypothetical protein 2768982 7286018 Ddes_2300 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480873.1 2768068 R 525146 CDS YP_002480874.1 220905562 7286019 complement(2769125..2769337) 1 NC_011883.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2769337 rpmE 7286019 rpmE Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 50S ribosomal protein L31 YP_002480874.1 2769125 R 525146 CDS YP_002480875.1 220905563 7286020 2769592..2770542 1 NC_011883.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: dvl:Dvul_0454 hemolysin A; hemolysin A 2770542 7286020 Ddes_2302 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hemolysin A YP_002480875.1 2769592 D 525146 CDS YP_002480876.1 220905564 7286021 2770655..2770774 1 NC_011883.1 hypothetical protein 2770774 7286021 Ddes_2303 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480876.1 2770655 D 525146 CDS YP_002480877.1 220905565 7286022 complement(2770771..2771115) 1 NC_011883.1 KEGG: dvl:Dvul_2213 hypothetical protein; hypothetical protein 2771115 7286022 Ddes_2304 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480877.1 2770771 R 525146 CDS YP_002480878.1 220905566 7286023 complement(2771120..2772832) 1 NC_011883.1 KEGG: dvl:Dvul_2211 tetratricopeptide domain-containing protein; hypothetical protein 2772832 7286023 Ddes_2305 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480878.1 2771120 R 525146 CDS YP_002480879.1 220905567 7286024 complement(2772900..2773487) 1 NC_011883.1 KEGG: dvl:Dvul_2210 putative lipoprotein; putative lipoprotein 2773487 7286024 Ddes_2306 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 putative lipoprotein YP_002480879.1 2772900 R 525146 CDS YP_002480880.1 220905568 7286025 2773854..2775128 1 NC_011883.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2775128 7286025 Ddes_2307 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 seryl-tRNA synthetase YP_002480880.1 2773854 D 525146 CDS YP_002480881.1 220905569 7286026 complement(2775333..2775623) 1 NC_011883.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nmc:NMC1495 hypothetical protein; antibiotic biosynthesis monooxygenase 2775623 7286026 Ddes_2308 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 antibiotic biosynthesis monooxygenase YP_002480881.1 2775333 R 525146 CDS YP_002480882.1 220905570 7286027 complement(2775620..2777041) 1 NC_011883.1 KEGG: ngk:NGK_2503 SdaA; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 2777041 7286027 Ddes_2309 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 L-serine dehydratase 1 YP_002480882.1 2775620 R 525146 CDS YP_002480883.1 220905571 7286028 complement(2777351..2777776) 1 NC_011883.1 KEGG: drm:Dred_2420 C_GCAxxG_C_C family protein; hypothetical protein 2777776 7286028 Ddes_2310 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480883.1 2777351 R 525146 CDS YP_002480884.1 220905572 7286029 complement(2777778..2779823) 1 NC_011883.1 KEGG: dvl:Dvul_2646 hypothetical protein; hypothetical protein 2779823 7286029 Ddes_2311 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480884.1 2777778 R 525146 CDS YP_002480885.1 220905573 7286030 complement(2779820..2780956) 1 NC_011883.1 KEGG: dvl:Dvul_2877 eIF-2B alpha/beta/delta-related uncharacterized proteins; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 2780956 7286030 Ddes_2312 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 translation initiation factor, aIF-2BI family YP_002480885.1 2779820 R 525146 CDS YP_002480886.1 220905574 7286031 2781319..2782500 1 NC_011883.1 PFAM: aminotransferase class I and II; KEGG: dvl:Dvul_2093 aminotransferase, class I and II; class I and II aminotransferase 2782500 7286031 Ddes_2313 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 class I and II aminotransferase YP_002480886.1 2781319 D 525146 CDS YP_002480887.1 220905575 7286032 2782899..2784098 1 NC_011883.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2784098 7286032 Ddes_2314 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 homoserine dehydrogenase YP_002480887.1 2782899 D 525146 CDS YP_002480888.1 220905576 7286033 2784095..2785288 1 NC_011883.1 KEGG: mba:Mbar_A2522 hypothetical protein; hypothetical protein 2785288 7286033 Ddes_2315 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480888.1 2784095 D 525146 CDS YP_002480889.1 220905577 7286034 2785305..2785721 1 NC_011883.1 PFAM: protein of unknown function UPF0047; KEGG: dvl:Dvul_2442 hypothetical protein; hypothetical protein 2785721 7286034 Ddes_2316 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480889.1 2785305 D 525146 CDS YP_002480890.1 220905578 7286035 2785978..2787258 1 NC_011883.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: dvl:Dvul_2890 DNA-directed DNA polymerase; DNA-directed DNA polymerase 2787258 7286035 Ddes_2317 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA-directed DNA polymerase YP_002480890.1 2785978 D 525146 CDS YP_002480891.1 220905579 7286036 complement(2787615..2788091) 1 NC_011883.1 PFAM: protein of unknown function DUF55; KEGG: dvl:Dvul_0815 hypothetical protein; hypothetical protein 2788091 7286036 Ddes_2318 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480891.1 2787615 R 525146 CDS YP_002480892.1 220905580 7286037 complement(2788254..2790473) 1 NC_011883.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: dvl:Dvul_2458 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 2790473 7286037 Ddes_2319 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 DNA mismatch repair protein MutL YP_002480892.1 2788254 R 525146 CDS YP_002480893.1 220905581 7286038 2790633..2790938 1 NC_011883.1 KEGG: dvl:Dvul_2455 hypothetical protein; hypothetical protein 2790938 7286038 Ddes_2320 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480893.1 2790633 D 525146 CDS YP_002480894.1 220905582 7286040 complement(2791398..2791895) 1 NC_011883.1 KEGG: dvl:Dvul_2454 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 2791895 7286040 Ddes_2322 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002480894.1 2791398 R 525146 CDS YP_002480895.1 220905583 7286041 complement(2792038..2793327) 1 NC_011883.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 2793327 7286041 Ddes_2323 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phosphoribosylamine--glycine ligase YP_002480895.1 2792038 R 525146 CDS YP_002480896.1 220905584 7286042 complement(2793434..2795119) 1 NC_011883.1 PFAM: FG-GAP repeat protein; KEGG: dvl:Dvul_0197 hypothetical protein; FG-GAP repeat-containing protein 2795119 7286042 Ddes_2324 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 FG-GAP repeat-containing protein YP_002480896.1 2793434 R 525146 CDS YP_002480897.1 220905585 7286043 2795499..2796887 1 NC_011883.1 PFAM: Fmu (Sun) domain protein; KEGG: dvu:DVU3189 NOL1/NOP2/sun family protein; Fmu (Sun) domain-containing protein 2796887 7286043 Ddes_2325 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fmu (Sun) domain-containing protein YP_002480897.1 2795499 D 525146 CDS YP_002480898.1 220905586 7286044 complement(2797138..2800074) 1 NC_011883.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: dvl:Dvul_0310 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2800074 7286044 Ddes_2326 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 (NiFe) hydrogenase maturation protein HypF YP_002480898.1 2797138 R 525146 CDS YP_002480899.1 220905587 7286045 2800383..2800952 1 NC_011883.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: dvl:Dvul_0311 cupin 2 domain-containing protein; XRE family transcriptional regulator 2800952 7286045 Ddes_2327 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 XRE family transcriptional regulator YP_002480899.1 2800383 D 525146 CDS YP_002480900.1 220905588 7286046 2801190..2802875 1 NC_011883.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dvl:Dvul_0312 acyl-CoA synthetase; AMP-binding domain-containing protein 2802875 7286046 Ddes_2328 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 AMP-binding domain-containing protein YP_002480900.1 2801190 D 525146 CDS YP_002480901.1 220905589 7286047 2803101..2804252 1 NC_011883.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: dvu:DVU3149 signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type 2804252 7286047 Ddes_2329 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 signal peptide peptidase SppA, 36K type YP_002480901.1 2803101 D 525146 CDS YP_002480902.1 220905590 7286048 2804638..2805114 1 NC_011883.1 hypothetical protein 2805114 7286048 Ddes_2330 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480902.1 2804638 D 525146 CDS YP_002480903.1 220905591 7286049 2805214..2805699 1 NC_011883.1 hypothetical protein 2805699 7286049 Ddes_2331 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480903.1 2805214 D 525146 CDS YP_002480904.1 220905592 7286050 complement(2805877..2806851) 1 NC_011883.1 KEGG: sse:Ssed_2182 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 2806851 7286050 Ddes_2332 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PAS/PAC sensor-containing diguanylate cyclase YP_002480904.1 2805877 R 525146 CDS YP_002480905.1 220905593 7286051 complement(2807099..2808811) 1 NC_011883.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2808811 rpsA 7286051 rpsA Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 30S ribosomal protein S1 YP_002480905.1 2807099 R 525146 CDS YP_002480906.1 220905594 7286052 2809231..2810145 1 NC_011883.1 PFAM: anaerobic cobalt chelatase; KEGG: dvl:Dvul_2310 anaerobic cobalt chelatase; anaerobic cobalt chelatase 2810145 7286052 Ddes_2334 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 anaerobic cobalt chelatase YP_002480906.1 2809231 D 525146 CDS YP_002480907.1 220905595 7286053 2810466..2811257 1 NC_011883.1 PFAM: YheO domain protein; KEGG: drm:Dred_0613 YheO domain-containing protein; YheO domain-containing protein 2811257 7286053 Ddes_2335 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 YheO domain-containing protein YP_002480907.1 2810466 D 525146 CDS YP_002480908.1 220905596 7286054 complement(2811701..2812300) 1 NC_011883.1 hypothetical protein 2812300 7286054 Ddes_2336 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480908.1 2811701 R 525146 CDS YP_002480909.1 220905597 7286055 complement(2812506..2815613) 1 NC_011883.1 KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein; hypothetical protein 2815613 7286055 Ddes_2337 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480909.1 2812506 R 525146 CDS YP_002480910.1 220905598 7286056 complement(2816061..2817341) 1 NC_011883.1 KEGG: dvl:Dvul_2452 phenylacetate--CoA ligase; phenylacetate--CoA ligase 2817341 7286056 Ddes_2338 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phenylacetate--CoA ligase YP_002480910.1 2816061 R 525146 CDS YP_002480911.1 220905599 7286057 complement(2817713..2818771) 1 NC_011883.1 PFAM: Asparaginase/glutaminase; KEGG: bxe:Bxe_A2464 L-asparaginase, type II; asparaginase 2818771 7286057 Ddes_2339 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 asparaginase YP_002480911.1 2817713 R 525146 CDS YP_002480912.1 220905600 7286058 complement(2818967..2819473) 1 NC_011883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_2705 probable acetyltransferase; N-acetyltransferase GCN5 2819473 7286058 Ddes_2340 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 N-acetyltransferase GCN5 YP_002480912.1 2818967 R 525146 CDS YP_002480913.1 220905601 7286059 2819657..2820910 1 NC_011883.1 PFAM: major facilitator superfamily MFS_1; KEGG: msu:MS0785 ProP protein; major facilitator superfamily protein 2820910 7286059 Ddes_2341 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 major facilitator superfamily protein YP_002480913.1 2819657 D 525146 CDS YP_002480914.1 220905602 7286060 complement(2821399..2822976) 1 NC_011883.1 PFAM: BCCT transporter; KEGG: amc:MADE_00106 putative choline-glycine betaine transporter; BCCT transporter 2822976 7286060 Ddes_2342 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 BCCT transporter YP_002480914.1 2821399 R 525146 CDS YP_002480915.1 220905603 7286061 2823378..2825264 1 NC_011883.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dsy:DSY4968 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 2825264 7286061 Ddes_2343 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 type I phosphodiesterase/nucleotide pyrophosphatase YP_002480915.1 2823378 D 525146 CDS YP_002480916.1 220905604 7286062 2825350..2825901 1 NC_011883.1 hypothetical protein 2825901 7286062 Ddes_2344 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480916.1 2825350 D 525146 CDS YP_002480917.1 220905605 7286063 complement(2826042..2827502) 1 NC_011883.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; AAA ATPase; KEGG: sfu:Sfum_1160 sigma54 specific transcriptional regulator, fis family; Fis family sigma-54 specific transcriptional regulator 2827502 7286063 Ddes_2345 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family sigma-54 specific transcriptional regulator YP_002480917.1 2826042 R 525146 CDS YP_002480918.1 220905606 7286064 2827684..2828121 1 NC_011883.1 hypothetical protein 2828121 7286064 Ddes_2346 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480918.1 2827684 D 525146 CDS YP_002480919.1 220905607 7286065 2828124..2829551 1 NC_011883.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dps:DP0303 dihydrolipoamide dehydrogenase, E3 component; dihydrolipoamide dehydrogenase 2829551 7286065 Ddes_2347 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dihydrolipoamide dehydrogenase YP_002480919.1 2828124 D 525146 CDS YP_002480920.1 220905608 7286066 2829612..2830016 1 NC_011883.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ank:AnaeK_2621 glycine cleavage system H protein; glycine cleavage system H protein 2830016 7286066 Ddes_2348 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glycine cleavage system H protein YP_002480920.1 2829612 D 525146 CDS YP_002480921.1 220905609 7286067 2830036..2831064 1 NC_011883.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pca:Pcar_0941 hypothetical protein; hypothetical protein 2831064 7286067 Ddes_2349 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480921.1 2830036 D 525146 CDS YP_002480922.1 220905610 7286068 2831099..2831374 1 NC_011883.1 hypothetical protein 2831374 7286068 Ddes_2350 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480922.1 2831099 D 525146 CDS YP_002480923.1 220905611 7286070 2831935..2832735 1 NC_011883.1 KEGG: pst:PSPTO_4754 hypothetical protein; hypothetical protein 2832735 7286070 Ddes_2351 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480923.1 2831935 D 525146 CDS YP_002480924.1 220905612 7286071 complement(2832835..2834619) 1 NC_011883.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: cyt:cce_1086 RNA-directed DNA polymerase; RNA-directed DNA polymerase 2834619 7286071 Ddes_2352 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RNA-directed DNA polymerase YP_002480924.1 2832835 R 525146 CDS YP_002480925.1 220905613 7286072 complement(2834862..2835116) 1 NC_011883.1 KEGG: oan:Oant_0679 hypothetical protein; hypothetical protein 2835116 7286072 Ddes_2353 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480925.1 2834862 R 525146 CDS YP_002480926.1 220905614 7286073 complement(2835237..2836025) 1 NC_011883.1 PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit; integrase catalytic subunit 2836025 7286073 Ddes_2354 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase catalytic subunit YP_002480926.1 2835237 R 525146 CDS YP_002480927.1 220905615 7286074 complement(2836082..2836348) 1 NC_011883.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2011 ISD1, transposase OrfA; transposase IS3/IS911 family protein 2836348 7286074 Ddes_2355 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 transposase IS3/IS911 family protein YP_002480927.1 2836082 R 525146 CDS YP_002480928.1 220905616 7286075 complement(2836488..2836670) 1 NC_011883.1 KEGG: pph:Ppha_1845 transcriptional regulator, XRE family; hypothetical protein 2836670 7286075 Ddes_2356 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480928.1 2836488 R 525146 CDS YP_002480929.1 220905617 7286076 2836832..2837947 1 NC_011883.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: sal:Sala_2616 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 2837947 7286076 Ddes_2357 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 filamentation induced by cAMP protein fic YP_002480929.1 2836832 D 525146 CDS YP_002480930.1 220905618 7286077 complement(2838186..2839301) 1 NC_011883.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: pca:Pcar_2123 hypothetical protein; filamentation induced by cAMP protein fic 2839301 7286077 Ddes_2358 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 filamentation induced by cAMP protein fic YP_002480930.1 2838186 R 525146 CDS YP_002480931.1 220905619 7286078 complement(2839403..2840599) 1 NC_011883.1 PFAM: integrase family protein; KEGG: dvl:Dvul_2564 phage integrase family protein; integrase family protein 2840599 7286078 Ddes_2359 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 integrase family protein YP_002480931.1 2839403 R 525146 CDS YP_002480932.1 220905620 7286079 complement(2841201..2842619) 1 NC_011883.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: dvl:Dvul_2510 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 2842619 7286079 Ddes_2360 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 phospholipase D/transphosphatidylase YP_002480932.1 2841201 R 525146 CDS YP_002480933.1 220905621 7286080 complement(2842678..2847873) 1 NC_011883.1 PFAM: ATP-binding region ATPase domain protein; KEGG: dvu:DVU2580 response regulator; ATP-binding protein 2847873 7286080 Ddes_2361 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 ATP-binding protein YP_002480933.1 2842678 R 525146 CDS YP_002480934.1 220905622 7286081 complement(2848097..2848867) 1 NC_011883.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_0668 TPR repeat-containing protein; hypothetical protein 2848867 7286081 Ddes_2362 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480934.1 2848097 R 525146 CDS YP_002480935.1 220905623 7286082 complement(2849400..2850050) 1 NC_011883.1 KEGG: dvu:DVU1045 hypothetical protein; hypothetical protein 2850050 7286082 Ddes_2363 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480935.1 2849400 R 525146 CDS YP_002480936.1 220905624 7286083 complement(2850043..2850180) 1 NC_011883.1 KEGG: dvl:Dvul_1947 hypothetical protein; hypothetical protein 2850180 7286083 Ddes_2364 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480936.1 2850043 R 525146 CDS YP_002480937.1 220905625 7286084 complement(2850245..2850937) 1 NC_011883.1 PFAM: cytochrome c assembly protein; KEGG: dvl:Dvul_1946 cytochrome c assembly protein; cytochrome c assembly protein 2850937 7286084 Ddes_2365 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c assembly protein YP_002480937.1 2850245 R 525146 CDS YP_002480938.1 220905626 7286085 complement(2850937..2851614) 1 NC_011883.1 PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: dvl:Dvul_1945 cytochrome c-type biogenesis protein CcmB; cytochrome c-type biogenesis protein CcmB 2851614 7286085 Ddes_2366 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c-type biogenesis protein CcmB YP_002480938.1 2850937 R 525146 CDS YP_002480939.1 220905627 7286086 complement(2851602..2852312) 1 NC_011883.1 KEGG: dvl:Dvul_1944 ABC transporter related; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 2852312 7286086 Ddes_2367 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 heme exporter protein CcmA YP_002480939.1 2851602 R 525146 CDS YP_002480940.1 220905628 7286087 complement(2852331..2854310) 1 NC_011883.1 PFAM: cytochrome c assembly protein; KEGG: dvl:Dvul_1943 cytochrome c assembly protein; cytochrome c assembly protein 2854310 7286087 Ddes_2368 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c assembly protein YP_002480940.1 2852331 R 525146 CDS YP_002480941.1 220905629 7286088 complement(2854436..2854849) 1 NC_011883.1 KEGG: dvl:Dvul_1942 cytochrome c-type biogenesis protein CcmE; cytochrome c-type biogenesis protein CcmE 2854849 7286088 Ddes_2369 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 cytochrome c-type biogenesis protein CcmE YP_002480941.1 2854436 R 525146 CDS YP_002480942.1 220905630 7286089 complement(2855428..2857092) 1 NC_011883.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dps:DP0230 hypothetical protein; diguanylate cyclase 2857092 7286089 Ddes_2370 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 diguanylate cyclase YP_002480942.1 2855428 R 525146 CDS YP_002480943.1 220905631 7286090 complement(2857321..2859147) 1 NC_011883.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: dvl:Dvul_0229 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine/fructose-6-phosphate aminotransferase 2859147 7286090 Ddes_2371 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 glucosamine/fructose-6-phosphate aminotransferase YP_002480943.1 2857321 R 525146 CDS YP_002480944.1 220905632 7286091 complement(2859312..2861231) 1 NC_011883.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: dvl:Dvul_1929 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2861231 7286091 Ddes_2372 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002480944.1 2859312 R 525146 CDS YP_002480945.1 220905633 7286092 complement(2861463..2863097) 1 NC_011883.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sus:Acid_7913 NifA subfamily transcriptional regulator; Fis family sigma-54 specific transcriptional regulator 2863097 7286092 Ddes_2373 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family sigma-54 specific transcriptional regulator YP_002480945.1 2861463 R 525146 CDS YP_002480946.1 220905634 7286093 2863436..2863720 1 NC_011883.1 PFAM: SAF domain protein; KEGG: bpt:Bpet0415 hypothetical protein; SAF domain-containing protein 2863720 7286093 Ddes_2374 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 SAF domain-containing protein YP_002480946.1 2863436 D 525146 CDS YP_002480947.1 220905635 7286094 2863725..2864885 1 NC_011883.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: csa:Csal_1766 altronate dehydratase; altronate dehydratase 2864885 7286094 Ddes_2375 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 altronate dehydratase YP_002480947.1 2863725 D 525146 CDS YP_002480948.1 220905636 7286095 2864963..2865922 1 NC_011883.1 PFAM: conserved hypothetical protein; KEGG: dsy:DSY3249 hypothetical protein; hypothetical protein 2865922 7286095 Ddes_2376 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480948.1 2864963 D 525146 CDS YP_002480949.1 220905637 7286096 2865975..2867537 1 NC_011883.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: dsy:DSY3248 hypothetical protein; hypothetical protein 2867537 7286096 Ddes_2377 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480949.1 2865975 D 525146 CDS YP_002480950.1 220905638 7286097 2867530..2867988 1 NC_011883.1 KEGG: dsy:DSY3247 hypothetical protein; hypothetical protein 2867988 7286097 Ddes_2378 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480950.1 2867530 D 525146 CDS YP_002480951.1 220905639 7286098 2868033..2869313 1 NC_011883.1 KEGG: mta:Moth_1926 hypothetical protein; hypothetical protein 2869313 7286098 Ddes_2379 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 hypothetical protein YP_002480951.1 2868033 D 525146 CDS YP_002480952.1 220905640 7286099 2869429..2870106 1 NC_011883.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsq:Rsph17025_3165 hypothetical protein; dimethylmenaquinone methyltransferase 2870106 7286099 Ddes_2380 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 dimethylmenaquinone methyltransferase YP_002480952.1 2869429 D 525146 CDS YP_002480953.1 220905641 7286100 complement(2870814..2872331) 1 NC_011883.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dvl:Dvul_1931 two component, sigma54 specific, Fis family transcriptional regulator; Fis family two component sigma-54 specific transcriptional regulator 2872331 7286100 Ddes_2381 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Fis family two component sigma-54 specific transcriptional regulator YP_002480953.1 2870814 R 525146 CDS YP_002480954.1 220905642 7286101 2872525..2873313 1 NC_011883.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: dvl:Dvul_1932 hypothetical protein; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 2873313 7286101 Ddes_2382 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_002480954.1 2872525 D 525146 CDS