-- dump date 20140619_064009 -- class Genbank::CDS -- table cds_note -- id note YP_004119776.1 KEGG: dsa:Desal_0001 cobyrinic acid ac-diamide synthase YP_004119777.1 KEGG: dsa:Desal_0002 hypothetical protein YP_004119778.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: dsa:Desal_0003 ParB-like partition protein; SMART: ParB domain protein nuclease YP_004119779.1 PFAM: PfkB domain protein; KEGG: dsa:Desal_0004 RfaE bifunctional protein YP_004119780.1 PFAM: phosphofructokinase; KEGG: dde:Dde_1589 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_004119781.1 KEGG: dvm:DvMF_1369 hypothetical protein YP_004119782.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dsa:Desal_0052 DNA binding domain protein, excisionase family YP_004119783.1 PFAM: Methyltransferase type 11; KEGG: dsa:Desal_0040 methyltransferase type 12 YP_004119784.1 KEGG: rlt:Rleg2_4102 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004119785.1 PFAM: YdjC family protein; KEGG: dsa:Desal_0029 YdjC family protein YP_004119786.1 PFAM: asparagine synthase; KEGG: mta:Moth_2511 hypothetical protein YP_004119787.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: tte:TTE0770 NCAIR mutase (PurE)-related proteins YP_004119788.1 PFAM: protein of unknown function DUF111; KEGG: dol:Dole_2215 hypothetical protein YP_004119789.1 PFAM: Protein of unknown function DUF3431; KEGG: dma:DMR_23640 hypothetical protein YP_004119790.1 PFAM: protein of unknown function DUF214; KEGG: dma:DMR_43990 hypothetical protein YP_004119791.1 KEGG: aba:Acid345_4578 TetR family transcriptional regulator YP_004119792.1 PFAM: regulatory protein TetR; KEGG: dsa:Desal_3802 transcriptional regulator, TetR family YP_004119793.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsa:Desal_3803 efflux transporter, RND family, MFP subunit YP_004119794.1 PFAM: acriflavin resistance protein; KEGG: dsa:Desal_3804 acriflavin resistance protein YP_004119795.1 PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: tfu:Tfu_0009 putative transferase YP_004119796.1 PFAM: protein of unknown function DUF147; KEGG: dsa:Desal_1772 hypothetical protein YP_004119797.1 KEGG: bcm:Bcenmc03_2129 DNA internalization-related competence protein ComEC/Rec2 YP_004119798.1 KEGG: dsa:Desal_0701 metal dependent phosphohydrolase YP_004119799.1 KEGG: nar:Saro_3452 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004119800.1 KEGG: ppd:Ppro_1622 putative PAS/PAC sensor protein YP_004119801.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_28810 GGDEF domain protein; SMART: GGDEF domain containing protein YP_004119802.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_3077 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004119803.1 PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_2150 glycosyl transferase family 2 YP_004119804.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; GAF domain protein; KEGG: dma:DMR_43850 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein YP_004119805.1 KEGG: dvm:DvMF_0387 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004119806.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: pth:PTH_1597 hypothetical protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004119807.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dma:DMR_20960 dehydrogenase YP_004119808.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dma:DMR_42360 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein YP_004119809.1 KEGG: dma:DMR_35370 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_004119810.1 KEGG: dol:Dole_2124 hypothetical protein; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase YP_004119811.1 KEGG: dal:Dalk_3112 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region YP_004119812.1 KEGG: sfu:Sfum_1335 hypothetical protein YP_004119813.1 KEGG: dsa:Desal_2958 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_004119814.1 TIGRFAM: glutamate racemase; KEGG: dvl:Dvul_2202 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004119815.1 PFAM: UspA domain-containing protein; KEGG: mgm:Mmc1_1698 UspA domain-containing protein YP_004119816.1 KEGG: mgm:Mmc1_1697 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_004119817.1 KEGG: dsa:Desal_1479 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004119818.1 KEGG: dsa:Desal_1478 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase YP_004119819.1 KEGG: dvu:DVU0628 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase YP_004119820.1 PFAM: MCP methyltransferase CheR-type; KEGG: dvu:DVU2076 chemotaxis protein methyltransferase; SMART: MCP methyltransferase CheR-type YP_004119821.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: dsa:Desal_1964 metal dependent phosphohydrolase YP_004119822.1 KEGG: bpy:Bphyt_0427 bile acid:sodium symporter YP_004119823.1 KEGG: ctt:CtCNB1_2340 electron transport complex, RnfABCDGE type, B YP_004119824.1 PFAM: protein of unknown function DUF477; KEGG: pca:Pcar_2278 hypothetical protein YP_004119825.1 PFAM: protein of unknown function DUF477; KEGG: plt:Plut_0394 hypothetical protein YP_004119826.1 PFAM: LemA family protein; KEGG: cch:Cag_1774 LemA family protein YP_004119827.1 KEGG: dma:DMR_19090 hypothetical protein YP_004119828.1 KEGG: dma:DMR_24260 hypothetical protein YP_004119829.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dsa:Desal_2540 lysine exporter protein (LysE/YggA) YP_004119830.1 KEGG: dal:Dalk_5021 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding YP_004119831.1 KEGG: dsa:Desal_3745 transcriptional regulator, GntR family with aminotransferase domain; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004119832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dsa:Desal_3746 lysine exporter protein (LysE/YggA) YP_004119833.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: dma:DMR_17240 fumarate hydratase YP_004119834.1 KEGG: dol:Dole_1156 YD repeat-containing protein YP_004119835.1 KEGG: npu:Npun_R5270 hypothetical protein YP_004119836.1 KEGG: sfu:Sfum_4063 NHL repeat-containing protein YP_004119837.1 KEGG: dsa:Desal_1136 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004119838.1 KEGG: dsa:Desal_1135 hypothetical protein; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein YP_004119839.1 KEGG: dsa:Desal_1134 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004119840.1 KEGG: dsa:Desal_1133 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004119841.1 KEGG: dsa:Desal_1132 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004119842.1 KEGG: dsa:Desal_1131 sulfate transporter; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS YP_004119843.1 PFAM: regulatory protein TetR; KEGG: dsa:Desal_1130 transcriptional regulator, TetR family YP_004119844.1 PFAM: KAP P-loop domain protein; KEGG: dfe:Dfer_0128 kap P-loop domain protein YP_004119845.1 KEGG: dma:DMR_00530 hypothetical membrane protein YP_004119846.1 KEGG: dsa:Desal_0960 deoxyribodipyrimidine photolyase; TIGRFAM: deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_004119847.1 PFAM: Protein of unknown function DUF2784; KEGG: pol:Bpro_3704 hypothetical protein YP_004119848.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dma:DMR_p1_00340 epimerase/dehydratase YP_004119849.1 PFAM: Nucleotidyl transferase; KEGG: dma:DMR_p1_00350 nucleotidyl transferase domain protein YP_004119850.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: dma:DMR_p1_00290 putative galactokinase/mevalonate kinase YP_004119851.1 PFAM: Transketolase domain-containing protein; KEGG: glo:Glov_0795 transketolase domain protein YP_004119852.1 KEGG: glo:Glov_0796 transketolase central region; PFAM: Transketolase central region; Transketolase domain-containing protein; SMART: Transketolase central region YP_004119853.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dma:DMR_p1_00320 GDP-L-fucose synthetase YP_004119854.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: hse:Hsero_4415 CDP-4-keto-6-deoxy-D-glucose-3-dehydrase YP_004119855.1 KEGG: dma:DMR_p1_00270 cobalamin vitamin B12-binding domain/radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004119856.1 PFAM: glycosyl transferase family 2; KEGG: dma:DMR_p1_00250 putative glycosyltransferase YP_004119857.1 PFAM: SNARE associated Golgi protein; KEGG: rba:RB11207 hypothetical protein YP_004119858.1 KEGG: ssl:SS1G_12409 hypothetical protein YP_004119859.1 KEGG: gvi:gll0262 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1643 YP_004119860.1 KEGG: mhu:Mhun_2752 hemerythrin-like, metal-binding; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein YP_004119861.1 PFAM: protein of unknown function DUF115; KEGG: bpo:BP951000_0426 hypothetical protein YP_004119862.1 PFAM: Methyltransferase type 11; KEGG: mbu:Mbur_1600 hypothetical protein YP_004119863.1 PFAM: glycosyl transferase family 2; KEGG: ter:Tery_4122 glycosyl transferase family protein YP_004119864.1 KEGG: ava:Ava_1119 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SMART: Tetratricopeptide repeat YP_004119865.1 KEGG: ter:Tery_0626 tetratricopeptide TPR_2 YP_004119866.1 KEGG: dsa:Desal_0573 hypothetical protein YP_004119867.1 KEGG: cyt:cce_1335 hypothetical protein YP_004119868.1 KEGG: sit:TM1040_1775 hypothetical protein YP_004119869.1 KEGG: dal:Dalk_1042 glycosyl transferase family 2 YP_004119870.1 PFAM: protein of unknown function DUF115; KEGG: sfr:Sfri_2831 hypothetical protein YP_004119871.1 KEGG: syg:sync_2023 adenylosuccinate synthetase YP_004119872.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: mae:Maeo_0417 acylneuraminate cytidylyltransferase YP_004119873.1 KEGG: ter:Tery_3753 methyltransferase type 11 YP_004119874.1 PFAM: glycosyl transferase family 2; KEGG: dds:Ddes_1697 glycosyl transferase family 2 YP_004119875.1 KEGG: rfr:Rfer_1241 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase YP_004119876.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: neu:NE1688 D-isomer specific 2-hydroxyacid dehydrogenase YP_004119877.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dde:Dde_3686 NAD-dependent epimerase/dehydratase family protein YP_004119878.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: azl:AZL_e04080 haloacid dehalogenase/epoxide hydrolase YP_004119879.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: mbu:Mbur_1594 acylneuraminate cytidylyltransferase YP_004119880.1 PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_1837 glycosyl transferase family 2 YP_004119881.1 KEGG: alv:Alvin_1965 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004119882.1 KEGG: dma:DMR_02290 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004119883.1 KEGG: dat:HRM2_48130 putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004119884.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ote:Oter_3920 response regulator receiver sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004119885.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004119886.1 KEGG: dsa:Desal_0213 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004119887.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: dma:DMR_31730 two-component hybrid sensor and regulator; SMART: response regulator receiver; PAS domain containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004119888.1 KEGG: sfu:Sfum_0617 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004119889.1 KEGG: dma:DMR_13170 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004119890.1 KEGG: sfu:Sfum_0619 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004119891.1 KEGG: sfu:Sfum_0618 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004119892.1 KEGG: dvm:DvMF_2339 pyruvate, water dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region YP_004119893.1 KEGG: dba:Dbac_2039 sigma 54 interacting domain protein; PFAM: sigma-54 factor interaction domain-containing protein; histidine kinase HAMP region domain protein; SMART: AAA ATPase YP_004119894.1 PFAM: UspA domain-containing protein; KEGG: dvm:DvMF_0804 UspA domain protein YP_004119895.1 KEGG: sfu:Sfum_0625 hypothetical protein YP_004119896.1 PFAM: protein of unknown function DUF81; KEGG: dvl:Dvul_2818 hypothetical protein YP_004119897.1 KEGG: cai:Caci_5729 histidinol-phosphate aminotransferase YP_004119898.1 KEGG: dma:DMR_42260 hypothetical protein YP_004119899.1 KEGG: sfu:Sfum_0629 hypothetical protein YP_004119900.1 KEGG: sfu:Sfum_0648 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004119901.1 KEGG: dvl:Dvul_0174 pyruvate, water dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region YP_004119902.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004119903.1 SMART: Formamidopyrimidine-DNA glycosylase catalytic domain protein; TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: dsa:Desal_0043 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_004119904.1 KEGG: dsa:Desal_0044 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_004119905.1 PFAM: methyltransferase small; KEGG: dba:Dbac_0705 methyltransferase small YP_004119906.1 KEGG: dsa:Desal_1295 hypothetical protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein YP_004119907.1 KEGG: dsa:Desal_0046 DNA repair ATPase-like protein YP_004119908.1 KEGG: dsa:Desal_0047 hypothetical protein YP_004119909.1 KEGG: dma:DMR_35920 hypothetical protein YP_004119910.1 KEGG: dma:DMR_35910 hypothetical protein YP_004119911.1 KEGG: dol:Dole_1156 YD repeat-containing protein YP_004119912.1 KEGG: sfu:Sfum_4063 NHL repeat-containing protein YP_004119913.1 PFAM: protein of unknown function DUF214; KEGG: dsa:Desal_3775 protein of unknown function DUF214 YP_004119914.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: dsa:Desal_3774 cell division ATP-binding protein FtsE; SMART: AAA ATPase YP_004119915.1 KEGG: dma:DMR_20570 transcription accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_004119916.1 KEGG: rop:ROP_51640 putative non-ribosomal peptide synthetase YP_004119917.1 KEGG: dsa:Desal_3676 hypothetical protein YP_004119918.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: dsa:Desal_3677 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004119919.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: dma:DMR_23240 hypothetical protein YP_004119920.1 KEGG: dsa:Desal_3679 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004119921.1 PFAM: Methyltransferase type 11; KEGG: dsa:Desal_0034 methyltransferase type 11 YP_004119922.1 PFAM: Silent information regulator protein Sir2; KEGG: nam:NAMH_0804 NAD-dependent deacetylase YP_004119923.1 PFAM: Thioredoxin domain-containing protein; KEGG: tmz:Tmz1t_0651 thioredoxin YP_004119924.1 PFAM: thioesterase superfamily protein; KEGG: mbn:Mboo_2142 hypothetical protein YP_004119925.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: gme:Gmet_3029 xylose isomerase-like TIM barrel YP_004119926.1 KEGG: dma:DMR_06610 hypothetical protein YP_004119927.1 KEGG: dsa:Desal_0064 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004119928.1 PFAM: Extracellular ligand-binding receptor; KEGG: dba:Dbac_0974 extracellular ligand-binding receptor YP_004119929.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dde:Dde_0711 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein YP_004119930.1 KEGG: dba:Dbac_0976 anti-sigma-factor antagonist; PFAM: response regulator receiver; Sulfate transporter/antisigma-factor antagonist STAS; SMART: response regulator receiver YP_004119931.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dsa:Desal_0285 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004119932.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dsa:Desal_0286 redoxin domain-containing protein YP_004119933.1 KEGG: dsa:Desal_2658 FdhB2 YP_004119934.1 KEGG: dat:HRM2_47140 FdhA8; Contains selenocysteine; manually curated; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; TIGRFAM: formate dehydrogenase, alpha subunit YP_004119935.1 KEGG: drt:Dret_0225 hypothetical protein YP_004119936.1 KEGG: dde:Dde_0714 transposase YP_004119937.1 PFAM: formate dehydrogenase accessory protein; KEGG: dde:Dde_0706 formate dehydrogenase formation protein FdhE YP_004119938.1 KEGG: dsa:Desal_3184 molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; SMART: molybdopterin binding domain YP_004119939.1 KEGG: dsa:Desal_2877 formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_004119940.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: sfu:Sfum_3074 molybdopterin-guanine dinucleotide biosynthesis MobB region YP_004119941.1 KEGG: dsa:Desal_3184 molybdenum cofactor synthesis domain protein YP_004119942.1 KEGG: tkm:TK90_1053 alpha/beta hydrolase fold protein YP_004119943.1 KEGG: ecb:100059886 similar to KIAA1319 protein YP_004119944.1 KEGG: rle:RL3597 putative DEAD box ATP-dependent RNA helicase protein YP_004119945.1 KEGG: dsa:Desal_0545 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004119946.1 PFAM: acriflavin resistance protein; KEGG: dsa:Desal_0546 acriflavin resistance protein YP_004119947.1 KEGG: dsa:Desal_0159 tRNA (adenine-N(1)-)-methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit YP_004119948.1 PFAM: Radical SAM domain protein; KEGG: dsa:Desal_0160 radical SAM domain protein YP_004119949.1 KEGG: dsa:Desal_0161 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004119950.1 PFAM: protein of unknown function DUF208; KEGG: dsa:Desal_0162 protein of unknown function DUF208 YP_004119951.1 KEGG: amd:AMED_0433 cadmium resistance transporter YP_004119952.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: dsa:Desal_0164 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004119953.1 KEGG: dde:Dde_2942 hypothetical protein YP_004119954.1 KEGG: dsa:Desal_0175 ribonuclease H; PFAM: ribonuclease H YP_004119955.1 KEGG: dsa:Desal_1027 hypothetical protein YP_004119956.1 KEGG: psb:Psyr_2119 acyltransferase 3 YP_004119958.1 KEGG: dvm:DvMF_2954 protein of unknown function DUF214; manually curated; PFAM: protein of unknown function DUF214 YP_004119959.1 KEGG: pca:Pcar_0269 ABC-type transport system, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004119960.1 KEGG: pca:Pcar_0270 putative MacA-like membrane transport protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004119961.1 KEGG: dsa:Desal_1486 protein of unknown function UPF0153 YP_004119962.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: dma:DMR_27100 phosphohexose mutase YP_004119963.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: dsa:Desal_0171 HflK protein; SMART: band 7 protein YP_004119964.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: dsa:Desal_0170 HflC protein; SMART: band 7 protein YP_004119965.1 PFAM: CI repressor; Peptidase S24/S26A/S26B, conserved region; KEGG: dsa:Desal_0117 putative phage repressor YP_004119966.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: sfu:Sfum_2737 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004119967.1 KEGG: dsa:Desal_0120 nucleoside recognition domain protein YP_004119968.1 KEGG: ang:An12g04770 hypothetical protein YP_004119970.1 PFAM: protein of unknown function DUF583; KEGG: dde:Dde_0991 hypothetical protein YP_004119971.1 PFAM: Abortive infection protein; KEGG: dsa:Desal_3362 abortive infection protein YP_004119972.1 PFAM: glycosyl transferase group 1; KEGG: dsa:Desal_3712 glycosyl transferase group 1 YP_004119973.1 KEGG: dsa:Desal_3682 CoA-binding domain protein; PFAM: CoA-binding domain protein; SMART: CoA-binding domain protein YP_004119974.1 KEGG: dsa:Desal_1603 hypothetical protein YP_004119975.1 KEGG: dak:DaAHT2_2198 acetate/CoA ligase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004119976.1 KEGG: dsa:Desal_3034 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004119977.1 KEGG: dma:DMR_27200 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004119978.1 PFAM: amidohydrolase; KEGG: nmu:Nmul_A0963 amidohydrolase YP_004119979.1 PFAM: Metal-dependent hydrolase HDOD; EAL domain protein; KEGG: dsa:Desal_3125 diguanylate phosphodiesterase YP_004119980.1 TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: dvl:Dvul_2477 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004119981.1 KEGG: met:M446_3221 hypothetical protein YP_004119982.1 KEGG: pan:PODANSg1132 hypothetical protein YP_004119983.1 PFAM: HEAT domain containing protein; KEGG: rrs:RoseRS_1736 heat repeat-containing PBS lyase YP_004119984.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: dvm:DvMF_1678 putative phage repressor YP_004119985.1 KEGG: dsa:Desal_1848 hypothetical protein YP_004119986.1 KEGG: azl:AZL_019380 ATP-dependent helicase Lhr and Lhr-like helicase YP_004119987.1 KEGG: bch:Bcen2424_4089 hypothetical protein YP_004119988.1 PFAM: NLP/P60 protein; KEGG: dvl:Dvul_2088 NLP/P60 protein YP_004119989.1 KEGG: dba:Dbac_3486 flavin reductase domain protein FMN-binding; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004119990.1 KEGG: saz:Sama_0384 hypothetical protein YP_004119991.1 KEGG: dsa:Desal_0039 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004119992.1 KEGG: dvm:DvMF_1338 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004119993.1 KEGG: dsa:Desal_1440 hypothetical protein YP_004119994.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: dde:Dde_3468 serine/threonine protein kinase YP_004119995.1 KEGG: dsa:Desal_3819 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004119996.1 KEGG: dsa:Desal_3820 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004119997.1 KEGG: dds:Ddes_0780 hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004119998.1 KEGG: dsa:Desal_3503 hypothetical protein YP_004119999.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: syr:SynRCC307_0099 DMT family permease YP_004120000.1 PFAM: amine oxidase; KEGG: dvm:DvMF_1928 FAD dependent oxidoreductase YP_004120001.1 PFAM: peptidase M24; creatinase; KEGG: dvm:DvMF_1929 peptidase M24 YP_004120002.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: dsa:Desal_0099 ribosomal RNA large subunit methyltransferase N; SMART: Elongator protein 3/MiaB/NifB YP_004120003.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; helicase domain protein; DEAD/DEAH box helicase domain protein; HRDC domain protein; KEGG: dde:Dde_2446 ATP-dependent DNA helicase RecQ; SMART: helicase domain protein; HRDC domain protein; DEAD-like helicase YP_004120004.1 PFAM: protein of unknown function DUF116; KEGG: drt:Dret_0017 protein of unknown function DUF116 YP_004120005.1 PFAM: glycosyl transferase family 9; KEGG: sfu:Sfum_0370 lipopolysaccharide heptosyltransferase III, putative YP_004120006.1 KEGG: dsa:Desal_0145 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004120007.1 TIGRFAM: peptide deformylase; KEGG: drt:Dret_0015 peptide deformylase; PFAM: formylmethionine deformylase YP_004120008.1 KEGG: dsa:Desal_0143 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004120009.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: dsa:Desal_0142 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004120010.1 KEGG: dvu:DVU1611 molybdopterin oxidoreductase domain-containing protein; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region YP_004120011.1 PFAM: inner-membrane translocator; KEGG: dat:HRM2_46250 ABC-type sugar transport-system, permease component YP_004120012.1 PFAM: inner-membrane translocator; KEGG: dba:Dbac_2934 inner-membrane translocator YP_004120013.1 KEGG: dba:Dbac_2933 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120014.1 PFAM: basic membrane lipoprotein; KEGG: dba:Dbac_2932 basic membrane lipoprotein YP_004120015.1 KEGG: dsa:Desal_3429 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004120016.1 KEGG: dsa:Desal_3428 putative transcriptional regulator, MerR family YP_004120017.1 PFAM: DoxX family protein; KEGG: dal:Dalk_4014 DoxX family protein YP_004120018.1 PFAM: histone deacetylase superfamily; KEGG: dsa:Desal_3443 histone deacetylase YP_004120019.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: dsa:Desal_3442 hydantoinase/oxoprolinase YP_004120020.1 KEGG: dma:DMR_26870 hypothetical protein YP_004120021.1 KEGG: dps:DP0199 hypothetical protein YP_004120022.1 KEGG: dvu:DVU1055 heptosyltransferase family protein; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9 YP_004120023.1 KEGG: dvm:DvMF_2255 hypothetical protein YP_004120024.1 PFAM: DsrE family protein; KEGG: dba:Dbac_0540 putative cytoplasmic protein YP_004120025.1 KEGG: mbn:Mboo_1037 hypothetical protein YP_004120026.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: dsa:Desal_3808 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein YP_004120027.1 PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_1952 glycosyl transferase family 2 YP_004120028.1 PFAM: alanine racemase domain protein; KEGG: dsa:Desal_3810 alanine racemase domain protein YP_004120029.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_3811 MotA/TolQ/ExbB proton channel YP_004120030.1 PFAM: OmpA/MotB domain protein; KEGG: dsa:Desal_3812 OmpA/MotB domain protein YP_004120031.1 PFAM: OmpA/MotB domain protein; KEGG: dsa:Desal_3813 OmpA/MotB domain protein YP_004120032.1 PFAM: flagellar basal body-associated protein FliL; KEGG: dsa:Desal_3814 flagellar basal body-associated protein FliL YP_004120033.1 KEGG: dde:Dde_3585 surface presentation of antigens (SpoA) protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_004120034.1 TIGRFAM: flagellar biosynthetic protein FliO; KEGG: dma:DMR_46190 putative flagellar protein FliO YP_004120035.1 KEGG: dsa:Desal_3817 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_004120036.1 KEGG: dba:Dbac_2730 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_004120037.1 KEGG: dsa:Desal_3728 ATP-dependent protease, putative YP_004120038.1 PFAM: metallophosphoesterase; KEGG: dvm:DvMF_2319 phosphoesterase, Icc protein-like protein YP_004120039.1 PFAM: protein of unknown function DUF163; KEGG: dsa:Desal_3717 protein of unknown function DUF163 YP_004120040.1 KEGG: dsa:Desal_3718 hypothetical protein YP_004120041.1 PFAM: Methyltransferase type 11; KEGG: sus:Acid_1391 methyltransferase type 11 YP_004120042.1 PFAM: glucose inhibited division protein; KEGG: dsa:Desal_3719 methyltransferase GidB YP_004120043.1 KEGG: dde:Dde_0772 serine phosphatase; PFAM: Stage II sporulation protein E; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein YP_004120044.1 KEGG: dde:Dde_0770 hypothetical protein YP_004120045.1 KEGG: dal:Dalk_1051 hypothetical protein YP_004120046.1 KEGG: dsa:Desal_1754 hypothetical protein YP_004120047.1 PFAM: aminotransferase class I and II; KEGG: sun:SUN_0877 aspartate aminotransferase YP_004120048.1 KEGG: drt:Dret_0543 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_004120049.1 PFAM: Sporulation domain-containing protein; KEGG: dsa:Desal_3691 sporulation domain protein YP_004120050.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: dsa:Desal_3690 arginyl-tRNA synthetase YP_004120051.1 PFAM: Protein of unknown function DUF2157, membrane; KEGG: cyc:PCC7424_0645 hypothetical protein YP_004120052.1 PFAM: branched-chain amino acid transport; KEGG: pla:Plav_1961 branched-chain amino acid transport YP_004120053.1 PFAM: AzlC family protein; KEGG: hla:Hlac_1381 AzlC family protein YP_004120054.1 KEGG: dsa:Desal_3745 transcriptional regulator, GntR family with aminotransferase domain; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004120055.1 KEGG: nmg:Nmag_3090 extracellular ligand-binding receptor YP_004120056.1 KEGG: dsa:Desal_3656 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_004120057.1 PFAM: phosphoglucose isomerase (PGI); KEGG: dsa:Desal_3771 phosphoglucose isomerase (PGI) YP_004120058.1 KEGG: dsa:Desal_3770 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004120059.1 KEGG: dsa:Desal_3729 hypothetical protein YP_004120060.1 KEGG: dsa:Desal_3730 hypothetical protein YP_004120061.1 KEGG: bac:BamMC406_6537 fis family transcriptional regulator YP_004120062.1 PFAM: extracellular solute-binding protein family 5; KEGG: dde:Dde_1329 dipeptide ABC transporter, solute-binding protein YP_004120063.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1328 dipeptide ABC transporter, permease protein YP_004120064.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1327 dipeptide ABC transporter, permease protein YP_004120065.1 KEGG: dde:Dde_1326 ATPase; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004120066.1 KEGG: dde:Dde_1325 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120067.1 KEGG: dsa:Desal_1339 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004120068.1 KEGG: dsa:Desal_1338 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120069.1 KEGG: dsa:Desal_1337 hypothetical protein YP_004120070.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: dsa:Desal_1336 aspartate ammonia-lyase YP_004120071.1 KEGG: dsa:Desal_1335 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB YP_004120072.1 KEGG: dsa:Desal_1334 transcriptional regulator YP_004120073.1 KEGG: dsa:Desal_1333 iron hydrogenase small subunit; PFAM: iron hydrogenase small subunit; SMART: iron hydrogenase small subunit YP_004120074.1 TIGRFAM: hydrogenase, Fe-only; KEGG: dsa:Desal_1332 hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein YP_004120075.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: dvm:DvMF_0806 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain YP_004120076.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvm:DvMF_0805 protein of unknown function DUF6 transmembrane YP_004120077.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dba:Dbac_2332 protein of unknown function DUF6 transmembrane YP_004120078.1 KEGG: sus:Acid_4172 hypothetical protein YP_004120079.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mgm:Mmc1_3313 hypothetical protein YP_004120080.1 KEGG: sil:SPO0550 hypothetical protein YP_004120081.1 KEGG: dde:Dde_0740 Fe-S oxidoreductase-like; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120082.1 PFAM: Glycosyltransferase 28 domain; KEGG: dde:Dde_0739 hypothetical protein YP_004120083.1 PFAM: glycosyl transferase group 1; KEGG: dba:Dbac_0359 glycosyl transferase group 1 YP_004120084.1 PFAM: protein of unknown function DUF34; KEGG: dvm:DvMF_0259 protein of unknown function DUF34 YP_004120085.1 PFAM: protein of unknown function DUF164; KEGG: dsa:Desal_3359 protein of unknown function DUF164 YP_004120086.1 KEGG: dsa:Desal_3358 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004120087.1 KEGG: dsa:Desal_3357 hypothetical protein YP_004120088.1 SMART: Cysteinyl-tRNA synthetase class Ia DALR; TIGRFAM: cysteinyl-tRNA synthetase; KEGG: dsa:Desal_3356 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_004120089.1 KEGG: phu:Phum_PHUM549550 class A rhodopsin-like G-protein coupled receptor GPRoar4, putative YP_004120090.1 KEGG: ach:Achl_3118 alpha-L-rhamnosidase YP_004120091.1 KEGG: azl:AZL_025450 hypothetical protein YP_004120092.1 KEGG: las:CLIBASIA_05595 hypothetical protein YP_004120093.1 PFAM: Bacteriophage head-to-tail connecting protein; KEGG: azl:AZL_025470 phage head-tail connector protein YP_004120094.1 KEGG: pti:PHATRDRAFT_45476 hypothetical protein YP_004120095.1 manually curated; KEGG: ana:all8065 transposase YP_004120096.1 KEGG: mmu:100041170 predicted gene 3178 YP_004120097.1 PFAM: FecR protein; Hemolysin-type calcium-binding region; KEGG: pol:Bpro_4929 hemolysin-type calcium-binding region YP_004120098.1 KEGG: cci:CC1G_08991 ribosome production factor 1 YP_004120099.1 KEGG: dal:Dalk_3968 protein of unknown function DUF264 YP_004120100.1 KEGG: mno:Mnod_2431 peptidase C14 caspase catalytic subunit P20; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004120101.1 KEGG: dsa:Desal_2355 hypothetical protein YP_004120102.1 KEGG: pat:Patl_2063 patatin YP_004120103.1 PFAM: dihydrouridine synthase DuS; KEGG: dsa:Desal_0369 dihydrouridine synthase DuS YP_004120104.1 PFAM: cyclase family protein; KEGG: dal:Dalk_2911 cyclase family protein YP_004120105.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dba:Dbac_0292 protein of unknown function DUF6 transmembrane YP_004120106.1 PFAM: SlyX family protein; KEGG: dsa:Desal_2174 SlyX family protein YP_004120107.1 PFAM: protein of unknown function DUF985; KEGG: aba:Acid345_1992 hypothetical protein YP_004120108.1 KEGG: dze:Dd1591_4030 putative phage tail fibre protein YP_004120109.1 PFAM: SPla/RYanodine receptor SPRY domain-containing protein; KEGG: mag:amb4276 hypothetical protein YP_004120110.1 KEGG: bur:Bcep18194_A5633 hypothetical protein YP_004120111.1 KEGG: dpo:Dpse_GA12539 GA12539 gene product from transcript GA12539-RA YP_004120112.1 KEGG: sgl:SG1190 hypothetical protein YP_004120113.1 KEGG: dde:Dde_3460 hypothetical protein YP_004120114.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; Cache type 2 domain protein; PAS fold-3 domain protein; KEGG: dsa:Desal_1525 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004120115.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; PAS fold-3 domain protein; KEGG: dsa:Desal_3020 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004120116.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nam:NAMH_1298 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004120117.1 KEGG: dma:DMR_45770 hypothetical protein YP_004120118.1 KEGG: ade:Adeh_2705 response regulator receiver YP_004120119.1 KEGG: dvm:DvMF_2797 hypothetical protein YP_004120120.1 PFAM: nitroreductase; KEGG: dak:DaAHT2_1631 nitroreductase YP_004120121.1 KEGG: dba:Dbac_1500 hypothetical protein YP_004120122.1 KEGG: rci:RRC32 hypothetical protein YP_004120123.1 TIGRFAM: alpha-acetolactate decarboxylase; KEGG: tkm:TK90_2325 alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase YP_004120124.1 PFAM: glycosyl transferase group 1; KEGG: dal:Dalk_4411 glycosyl transferase group 1 YP_004120125.1 KEGG: dsa:Desal_3036 Hpt protein; PFAM: Hpt domain protein; SMART: Hpt domain protein YP_004120126.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: dvl:Dvul_1594 outer membrane chaperone Skp (OmpH) YP_004120127.1 KEGG: dsa:Desal_2789 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120128.1 KEGG: dsa:Desal_2938 protein of unknown function DUF1078 domain protein; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein YP_004120129.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: mba:Mbar_A3708 hypothetical protein YP_004120130.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dma:DMR_39050 putative sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_004120131.1 PFAM: extracellular solute-binding protein family 3; KEGG: sse:Ssed_1047 hypothetical protein YP_004120132.1 PFAM: protein of unknown function DUF1007; high-affinity nickel-transporter; KEGG: dsa:Desal_0126 high-affinity nickel-transporter YP_004120133.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: adg:Adeg_0245 anti-sigma-28 factor, FlgM YP_004120134.1 KEGG: dsa:Desal_3254 hypothetical protein YP_004120135.1 PFAM: type IV pilus assembly PilZ; KEGG: dsa:Desal_2775 type IV pilus assembly PilZ YP_004120136.1 KEGG: dvl:Dvul_2494 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc YP_004120137.1 KEGG: dde:Dde_0685 tungsten formylmethanofuran dehydrogenase family protein/molybdopterin binding protein; PFAM: formylmethanofuran dehydrogenase subunit E region; molybdopterin binding domain; SMART: molybdopterin binding domain YP_004120138.1 PFAM: Polysulphide reductase NrfD; KEGG: dsa:Desal_0182 polysulphide reductase NrfD YP_004120139.1 KEGG: dsa:Desal_0183 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004120140.1 KEGG: dvl:Dvul_1777 cytochrome c family protein YP_004120141.1 KEGG: dsa:Desal_0185 reductase, iron-sulfur binding subunit, putative YP_004120142.1 PFAM: Nitrate reductase gamma subunit; KEGG: dsa:Desal_0186 nitrate reductase gamma subunit YP_004120143.1 KEGG: dsa:Desal_0187 hypothetical protein YP_004120144.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: dvm:DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004120145.1 PFAM: Protein of unknown function DUF2318, membrane; KEGG: dap:Dacet_1965 hypothetical protein YP_004120146.1 PFAM: protein of unknown function DUF214; KEGG: dvm:DvMF_2063 protein of unknown function DUF214 YP_004120147.1 KEGG: dvm:DvMF_2062 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120148.1 KEGG: dma:DMR_28930 UmuC protein; PFAM: UMUC domain protein DNA-repair protein YP_004120149.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: syx:SynWH7803_1081 SOS-regulated protein YP_004120150.1 KEGG: pst:PSPTO_4528 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004120151.1 KEGG: dps:DP1789 hypothetical protein YP_004120152.1 KEGG: dma:DMR_28310 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004120153.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dvm:DvMF_2473 cytochrome bd ubiquinol oxidase subunit I YP_004120154.1 PFAM: phosphofructokinase; KEGG: dde:Dde_1589 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_004120155.1 PFAM: heat shock protein Hsp20; KEGG: dma:DMR_39670 heat shock protein HSP20 family protein YP_004120156.1 KEGG: bba:Bd1429 putative amino acid ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004120157.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: sat:SYN_01637 transposase YP_004120158.1 PFAM: Dihaem cytochrome c; KEGG: dde:Dde_1896 putative lipoprotein YP_004120159.1 PFAM: metallophosphoesterase; KEGG: dde:Dde_1891 hypothetical protein YP_004120160.1 PFAM: peptidase M48 Ste24p; KEGG: dds:Ddes_2054 peptidase M48 Ste24p YP_004120161.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: dsa:Desal_3381 HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein YP_004120162.1 PFAM: Methyltransferase type 11; KEGG: bmq:BMQ_3659 putative methyltransferase YP_004120163.1 KEGG: mta:Moth_0725 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain-containing protein; SMART: AAA ATPase YP_004120164.1 PFAM: major facilitator superfamily MFS_1; KEGG: dol:Dole_3001 major facilitator transporter YP_004120165.1 KEGG: sfu:Sfum_3568 hypothetical protein YP_004120166.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: oih:OB2838 hypothetical protein YP_004120167.1 KEGG: afn:Acfer_1103 hypothetical protein YP_004120168.1 KEGG: afn:Acfer_1101 hypothetical protein YP_004120169.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: chy:CHY_1256 UxaA family hydrolase YP_004120170.1 KEGG: tpd:Teth39_1678 SAF domain-containing protein; PFAM: SAF domain protein; SMART: SAF domain protein YP_004120171.1 KEGG: vvu:VV1_2520 type IIA topoisomerase, A subunit YP_004120172.1 KEGG: pst:PSPTO_0037 helicase domain protein; PFAM: type III restriction protein res subunit; restriction endonuclease; helicase domain protein; N-6 DNA methylase; SMART: DEAD-like helicase ; helicase domain protein YP_004120173.1 KEGG: glo:Glov_0856 hypothetical protein YP_004120174.1 manually curated; KEGG: glo:Glov_0855 hypothetical protein YP_004120175.1 KEGG: neu:NE2445 integrase catalytic subunit YP_004120176.1 PFAM: glycosyl transferase family 2; KEGG: ppp:PHYPADRAFT_72437 hypothetical protein YP_004120177.1 KEGG: cbh:CLC_2591 radical SAM domain-containing protein YP_004120178.1 KEGG: fpl:Ferp_0339 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120179.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rhi:NGR_a02670 conserved hypothetical 22.4 kDa protein of the Fic family YP_004120180.1 KEGG: bcq:BCQ_2893 hypothetical protein YP_004120181.1 KEGG: dde:Dde_2849 ISPg7, transposase YP_004120182.1 KEGG: spl:Spea_2921 radical SAM domain-containing protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120183.1 KEGG: dau:Daud_1318 hypothetical protein YP_004120184.1 KEGG: mhu:Mhun_0729 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004120185.1 KEGG: dal:Dalk_1508 integrase catalytic region; manually curated; PFAM: Integrase catalytic region YP_004120186.1 PFAM: transposase IS3/IS911 family protein; KEGG: cyt:cce_5192 putative transposase YP_004120187.1 manually curated; KEGG: see:SNSL254_p_0003 plasmid replication protein RepA YP_004120188.1 PFAM: integrase family protein; KEGG: dsa:Desal_0327 integrase family protein YP_004120189.1 PFAM: integrase family protein; KEGG: dap:Dacet_0700 integrase family protein YP_004120190.1 KEGG: ter:Tery_2002 regulatory protein, MerR YP_004120191.1 SMART: helix-turn-helix domain protein; KEGG: dsa:Desal_2151 transcriptional regulator, XRE family YP_004120192.1 KEGG: dvu:DVU1518 transcriptional regulator CI, truncation YP_004120193.1 KEGG: dvl:Dvul_1485 hypothetical protein YP_004120194.1 KEGG: spu:582670 hypothetical LOC582670 YP_004120195.1 KEGG: ami:Amir_6917 fructose-bisphosphate aldolase YP_004120196.1 KEGG: dvl:Dvul_2777 hypothetical protein YP_004120200.1 KEGG: ote:Oter_3380 hypothetical protein YP_004120201.1 KEGG: mlo:mll5803 hypothetical protein YP_004120202.1 KEGG: syx:SynWH7803_0023 DnaJ-class molecular chaperone YP_004120203.1 KEGG: ath:AT4G16820 lipase class 3 family protein YP_004120204.1 KEGG: cyc:PCC7424_3591 chloride channel core YP_004120205.1 PFAM: Uncharacterised protein family UPF0150; KEGG: bid:Bind_2667 hypothetical protein YP_004120206.1 KEGG: swo:Swol_1661 hypothetical protein; manually curated; PFAM: YcfA family protein YP_004120207.1 KEGG: bps:BPSL0143 hypothetical protein YP_004120208.1 KEGG: ppd:Ppro_3072 hypothetical protein YP_004120210.1 KEGG: mmw:Mmwyl1_4410 histidine kinase YP_004120212.1 KEGG: spe:Spro_2033 hypothetical protein YP_004120213.1 PFAM: transcriptional activator Ogr/delta; KEGG: shw:Sputw3181_2904 phage transcriptional activator, Ogr/delta YP_004120214.1 KEGG: dvl:Dvul_2768 PBSX family phage portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004120215.1 manually curated; KEGG: dvl:Dvul_2767 hypothetical protein YP_004120216.1 PFAM: capsid scaffolding; KEGG: dvl:Dvul_1471 phage capsid scaffolding YP_004120217.1 KEGG: dvl:Dvul_2765 P2 family phage major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_004120218.1 PFAM: small terminase subunit; KEGG: dvl:Dvul_1469 phage small terminase subunit YP_004120219.1 PFAM: head completion protein; KEGG: dvl:Dvul_2763 prophage PSPPH06, putative head completion/stabilization protein YP_004120220.1 KEGG: dvl:Dvul_2762 hypothetical protein YP_004120221.1 KEGG: hch:HCH_06771 hypothetical protein YP_004120222.1 PFAM: Protein of unknown function DUF2586; KEGG: dvl:Dvul_1465 hypothetical protein YP_004120223.1 PFAM: Protein of unknown function DUF2597; KEGG: dvl:Dvul_2759 prophage PSPPH06, putative tail tube protein YP_004120224.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ctu:Ctu_32480 uncharacterized 8.5 kDa protein in gpA 5'region YP_004120225.1 KEGG: dvm:DvMF_1662 hypothetical protein YP_004120226.1 KEGG: dsa:Desal_2355 hypothetical protein YP_004120227.1 KEGG: dds:Ddes_0251 phage protein YP_004120228.1 KEGG: dds:Ddes_0252 hypothetical protein YP_004120229.1 KEGG: xtr:394798 non-SMC condensin I complex, subunit G YP_004120230.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: dba:Dbac_2571 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein YP_004120231.1 PFAM: plasmid maintenance system killer; KEGG: noc:Noc_0570 plasmid maintenance system killer YP_004120232.1 KEGG: dvl:Dvul_2752 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004120233.1 PFAM: Protein of unknown function DUF2590; KEGG: dvl:Dvul_1456 hypothetical protein YP_004120234.1 PFAM: Baseplate J family protein; KEGG: dvl:Dvul_1453 uncharacterized phage Mu protein GP47-like protein YP_004120235.1 KEGG: pcs:Pc21g14400 Pc21g14400 YP_004120236.1 KEGG: hch:HCH_00379 phage protein YP_004120237.1 PFAM: Protein of unknown function DUF3751, tail fiber protein; KEGG: dvl:Dvul_2748 hypothetical protein YP_004120238.1 KEGG: hma:rrnAC2978 hypothetical protein YP_004120239.1 KEGG: cai:Caci_0482 major facilitator superfamily MFS_1 YP_004120240.1 KEGG: hch:HCH_06784 hypothetical protein YP_004120241.1 KEGG: dvl:Dvul_1448 nucleoid DNA-binding protein YP_004120242.1 KEGG: dvl:Dvul_1447 hypothetical protein YP_004120243.1 PFAM: Gp5 domain protein; KEGG: dvl:Dvul_1446 GP5 domain-containing protein YP_004120244.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004120245.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004120246.1 KEGG: dds:Ddes_2235 hypothetical protein YP_004120247.1 KEGG: mag:amb3299 RTX toxins and related Ca2+-binding protein YP_004120248.1 KEGG: mpe:MYPE4920 hypothetical protein YP_004120249.1 KEGG: dap:Dacet_0773 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004120250.1 KEGG: dds:Ddes_2238 hypothetical protein YP_004120251.1 PFAM: integrase family protein; KEGG: dds:Ddes_2240 integrase family protein YP_004120252.1 KEGG: dvl:Dvul_2781 hypothetical protein YP_004120253.1 PFAM: integrase family protein; KEGG: dds:Ddes_2236 integrase family protein YP_004120254.1 KEGG: nca:Noca_4254 kinetoplast DNA-associated protein YP_004120255.1 KEGG: mbr:MONBRDRAFT_28694 hypothetical protein YP_004120256.1 KEGG: dsa:Desal_2183 transcriptional regulator, CopG family YP_004120257.1 PFAM: plasmid stabilization system; KEGG: rhi:NGR_a02800 conserved hypothetical 11.0 kDa protein YP_004120258.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rrs:RoseRS_0276 filamentation induced by cAMP protein Fic YP_004120259.1 KEGG: dde:Dde_2910 transcriptional regulator YP_004120260.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rhi:NGR_a02670 conserved hypothetical 22.4 kDa protein of the Fic family YP_004120261.1 KEGG: nar:Saro_3948 hypothetical protein YP_004120262.1 PFAM: transposase IS3/IS911 family protein; KEGG: dap:Dacet_1482 transposase IS3/IS911 family protein YP_004120263.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dsa:Desal_0820 cytochrome bd-type quinol oxidase subunit 1-like protein YP_004120264.1 KEGG: dsa:Desal_0819 hypothetical protein YP_004120265.1 KEGG: drt:Dret_2373 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120266.1 TIGRFAM: transcriptional activator, Baf family; KEGG: dba:Dbac_3221 pantothenate kinase; PFAM: Bvg accessory factor YP_004120267.1 KEGG: alv:Alvin_2721 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein YP_004120268.1 TIGRFAM: enolase; KEGG: dsa:Desal_3426 phosphopyruvate hydratase; PFAM: Enolase-like YP_004120269.1 KEGG: dde:Dde_2776 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004120270.1 PFAM: permease; KEGG: dba:Dbac_1904 permease YP_004120271.1 KEGG: dba:Dbac_1903 redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; PFAM: glutaredoxin YP_004120272.1 PFAM: DGC domain protein; KEGG: dma:DMR_37400 hypothetical protein YP_004120273.1 PFAM: Thioredoxin domain-containing protein; KEGG: dsa:Desal_2204 thioredoxin domain protein YP_004120274.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: dba:Dbac_1909 cytochrome c biogenesis protein transmembrane region YP_004120275.1 KEGG: dba:Dbac_0382 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004120276.1 PFAM: methylamine utilisation MauE; KEGG: sfu:Sfum_3388 DoxX family protein YP_004120277.1 KEGG: dsa:Desal_3423 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004120278.1 KEGG: sna:Snas_2763 NmrA family protein YP_004120279.1 KEGG: dsa:Desal_3421 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004120280.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: dma:DMR_11500 hypothetical protein YP_004120281.1 KEGG: met:M446_6122 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004120282.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; CHASE domain protein; KEGG: dar:Daro_2934 PAS; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_004120283.1 PFAM: SH3 type 3 domain protein; KEGG: drt:Dret_2345 17 kDa surface antigen YP_004120284.1 KEGG: mag:amb1713 sulfatase modifying factor 1 precursor YP_004120285.1 PFAM: NADPH-dependent FMN reductase; KEGG: dak:DaAHT2_1314 NADPH-dependent FMN reductase YP_004120286.1 PFAM: nitroreductase; KEGG: dsa:Desal_3763 nitroreductase YP_004120287.1 PFAM: helix-turn-helix HxlR type; KEGG: dvm:DvMF_2974 transcriptional regulator, HxlR family YP_004120288.1 KEGG: dma:DMR_43850 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004120289.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004120290.1 KEGG: dma:DMR_43850 two-component hybrid sensor and regulator; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver YP_004120291.1 KEGG: pwa:Pecwa_1681 hypothetical protein YP_004120292.1 PFAM: extracellular solute-binding protein family 3; KEGG: dsa:Desal_0670 extracellular solute-binding protein family 3 YP_004120293.1 KEGG: dsa:Desal_0904 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004120294.1 KEGG: dsa:Desal_2507 cobyrinic acid ac-diamide synthase YP_004120295.1 TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: dsa:Desal_2508 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane YP_004120296.1 KEGG: dsa:Desal_2509 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_004120297.1 PFAM: Methyltransferase type 11; KEGG: sfu:Sfum_0240 methyltransferase type 11 YP_004120298.1 PFAM: Integral membrane protein TerC; KEGG: dma:DMR_28920 hypothetical membrane protein YP_004120299.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: sti:Sthe_2438 6-phosphogluconolactonase YP_004120300.1 KEGG: dde:Dde_3702 transcriptional regulator, AraC type; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: transcription activator effector binding; Helix-turn-helix, AraC domain YP_004120301.1 KEGG: bja:blr3694 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004120302.1 KEGG: mmi:MMAR_1074 hypothetical protein YP_004120303.1 KEGG: ajs:Ajs_2416 hypothetical protein YP_004120304.1 KEGG: tau:Tola_1246 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120305.1 PFAM: protein of unknown function DUF214; KEGG: glo:Glov_1801 protein of unknown function DUF214 YP_004120306.1 KEGG: dak:DaAHT2_0164 hypothetical protein YP_004120307.1 KEGG: glo:Glov_1799 hypothetical protein YP_004120308.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dvu:DVU2250 AMP-binding protein YP_004120309.1 KEGG: dsa:Desal_0151 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004120310.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dsa:Desal_0150 AMP-binding domain protein YP_004120311.1 KEGG: sfu:Sfum_0869 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004120312.1 KEGG: dsa:Desal_0148 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004120313.1 KEGG: dvm:DvMF_1728 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120314.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: dvm:DvMF_1727 hypothetical protein YP_004120315.1 KEGG: dsa:Desal_3371 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase; response regulator receiver YP_004120316.1 KEGG: dsa:Desal_1027 hypothetical protein YP_004120317.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: dba:Dbac_2628 PAS/PAC sensor hybrid histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004120318.1 PFAM: glycosyl transferase group 1; polysaccharide deacetylase; KEGG: dsa:Desal_3367 glycosyl transferase group 1 YP_004120319.1 PFAM: glycosyl transferase family 2; KEGG: dsa:Desal_3364 glycosyl transferase family 2 YP_004120320.1 KEGG: dsa:Desal_1779 putative RNA methylase; PFAM: RNA methylase; THUMP domain-containing protein YP_004120321.1 KEGG: dsa:Desal_0191 hypothetical protein YP_004120322.1 KEGG: ecb:100059271 Fas (TNFRSF6) binding factor 1 YP_004120323.1 KEGG: dde:Dde_0720 anti-anti-sigma regulatory factor, SpoIIAA; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_004120324.1 PFAM: ATP-binding region ATPase domain protein; KEGG: pth:PTH_2273 anti-sigma regulatory factor YP_004120325.1 KEGG: dde:Dde_0721 serine phosphatase; PFAM: Stage II sporulation protein E; Cache domain protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein YP_004120326.1 KEGG: dde:Dde_0722 ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_004120327.1 KEGG: dat:HRM2_47580 putative DNA-binding protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004120328.1 PFAM: integrase family protein; KEGG: dol:Dole_2906 integrase family protein YP_004120329.1 KEGG: sma:SAV_667 oxidoreductase YP_004120330.1 SMART: Helix-turn-helix, AraC domain; KEGG: nmc:NMC0341 AraC family transcriptional regulator YP_004120331.1 KEGG: wsu:WS1264 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004120332.1 KEGG: wsu:WS1265 ABC transporter ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004120333.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sdl:Sdel_1574 TonB-dependent receptor YP_004120334.1 PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: abu:Abu_2286 hypothetical protein YP_004120335.1 KEGG: pgi:PG1179 hypothetical protein YP_004120336.1 KEGG: pgi:PG1178 hypothetical protein YP_004120337.1 KEGG: pgi:PG1180 hypothetical protein YP_004120338.1 PFAM: Uncharacterised conserved protein UCP028069; KEGG: dsa:Desal_2081 hypothetical protein YP_004120339.1 PFAM: MotA/TolQ/ExbB proton channel; Cell-wall binding lipoprotein YkyA, putative; KEGG: dsa:Desal_2082 MotA/TolQ/ExbB proton channel YP_004120340.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_2083 MotA/TolQ/ExbB proton channel YP_004120341.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dde:Dde_2155 biopolymer transport protein (ExbD2) YP_004120342.1 KEGG: dsa:Desal_2085 TonB family protein; TIGRFAM: TonB family protein; PFAM: TonB domain YP_004120343.1 KEGG: dsa:Desal_2086 tetratricopeptide domain protein YP_004120344.1 PFAM: Leucine carboxyl methyltransferase; KEGG: aat:D11S_0671 O-methyltransferase N-terminus family protein YP_004120345.1 KEGG: pca:Pcar_0855 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120346.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pca:Pcar_0856 ABC-type transport system, permease component YP_004120347.1 KEGG: pca:Pcar_0857 ABC-type transport system, periplasmic component YP_004120348.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dat:HRM2_08940 TonB-dependent outer-membrane uptake protein YP_004120349.1 KEGG: swo:Swol_1685 ABC-type Fe3+ transport system periplasmic component-like protein YP_004120350.1 SMART: AAA ATPase; KEGG: mfs:MFS40622_0998 ABC transporter related protein YP_004120351.1 PFAM: cobalamin synthesis protein P47K; KEGG: swo:Swol_1684 hypothetical protein YP_004120352.1 KEGG: dds:Ddes_0430 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004120354.1 PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce3384 multidrug resistance protein YP_004120355.1 PFAM: regulatory protein MarR; KEGG: cac:CA_C0559 MarR family transcriptional regulator YP_004120356.1 KEGG: dsa:Desal_1339 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004120357.1 KEGG: dsa:Desal_1338 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120358.1 KEGG: dsa:Desal_1337 hypothetical protein YP_004120359.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: dsa:Desal_1336 aspartate ammonia-lyase YP_004120360.1 KEGG: dsa:Desal_1335 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB YP_004120361.1 KEGG: dsa:Desal_1334 transcriptional regulator YP_004120362.1 KEGG: dsa:Desal_1333 iron hydrogenase small subunit; PFAM: iron hydrogenase small subunit; SMART: iron hydrogenase small subunit YP_004120363.1 TIGRFAM: hydrogenase, Fe-only; KEGG: dsa:Desal_1332 hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein YP_004120364.1 KEGG: dsa:Desal_3708 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004120365.1 PFAM: amino acid permease-associated region; KEGG: dba:Dbac_3457 amino acid permease-associated region YP_004120366.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dba:Dbac_3456 transcriptional regulator, LysR family YP_004120367.1 PFAM: polysaccharide deacetylase; KEGG: dal:Dalk_0582 polysaccharide deacetylase YP_004120368.1 PFAM: protein of unknown function DUF214; KEGG: dde:Dde_0733 hypothetical protein YP_004120369.1 KEGG: dde:Dde_0731 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120370.1 PFAM: protein of unknown function DUF214; KEGG: dde:Dde_0730 hypothetical protein YP_004120371.1 KEGG: dsa:Desal_1757 hypothetical protein YP_004120372.1 KEGG: dde:Dde_0728 hypothetical protein YP_004120373.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dde:Dde_3308 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004120374.1 KEGG: dsa:Desal_3347 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004120375.1 KEGG: aau:AAur_2802 putative ABC-type dipeptide/oligopeptide transport systems, permease components YP_004120376.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: dsa:Desal_3346 6-pyruvoyl tetrahydropterin synthase and hypothetical protein YP_004120377.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: tgr:Tgr7_0591 MazG nucleotide pyrophosphohydrolase YP_004120378.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dsa:Desal_3345 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004120379.1 KEGG: dsa:Desal_3344 sodium/sulphate symporter YP_004120380.1 KEGG: dsa:Desal_2677 cache sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Cache domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004120381.1 KEGG: pop:POPTR_656596 precursor of dehydrogenase dihydrolipoamide dehydrogenase 1 YP_004120382.1 KEGG: rle:pRL100169 hypothetical protein YP_004120383.1 KEGG: esi:Exig_0589 two component AraC family transcriptional regulator YP_004120384.1 KEGG: nhl:Nhal_1562 hypothetical protein YP_004120385.1 KEGG: dsa:Desal_0113 hypothetical protein YP_004120386.1 PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dsa:Desal_2810 ABC-type Co2+ transport system periplasmic component-like protein YP_004120387.1 manually curated; KEGG: cpi:Cpin_3035 hypothetical protein YP_004120388.1 manually curated; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; KEGG: dma:DMR_43370 peptide chain release factor 3; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004120389.1 KEGG: dvu:DVUA0138 sensor histidine kinase; PFAM: Diverse 7TM receptor transmembrane region; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004120390.1 manually curated; TIGRFAM: adhesin HecA family; KEGG: spw:SPCG_1750 cell wall surface anchor family protein; PFAM: Haemagluttinin repeat-containing protein YP_004120391.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004120392.1 PFAM: transposase IS3/IS911 family protein; KEGG: dap:Dacet_1482 transposase IS3/IS911 family protein YP_004120393.1 KEGG: psp:PSPPH_4560 filamentous hemagglutinin; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein YP_004120394.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: pap:PSPA7_4641 hemolysin activator protein YP_004120395.1 KEGG: gur:Gura_0745 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004120396.1 KEGG: dde:Dde_3030 hypothetical protein YP_004120397.1 PFAM: Protein of unknown function DUF3100; KEGG: dde:Dde_3031 hypothetical protein YP_004120398.1 KEGG: dde:Dde_3032 hypothetical protein YP_004120399.1 KEGG: dde:Dde_3033 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004120400.1 KEGG: dde:Dde_3034 L-serine ammonia-lyase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004120401.1 PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_0631 extracellular solute-binding protein family 1 YP_004120402.1 KEGG: pwa:Pecwa_0844 ABC transporter related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004120403.1 PFAM: metallophosphoesterase; KEGG: pct:PC1_0629 metallophosphoesterase YP_004120404.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_0842 binding-protein-dependent transport systems inner membrane component YP_004120405.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_0677 binding-protein-dependent transport systems inner membrane component YP_004120406.1 KEGG: tna:CTN_0940 NagD protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004120407.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: tme:Tmel_0616 glycerol-3-phosphate responsive antiterminator YP_004120408.1 PFAM: sodium:dicarboxylate symporter; KEGG: dae:Dtox_0949 sodium:dicarboxylate symporter YP_004120409.1 KEGG: dae:Dtox_0948 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004120410.1 KEGG: dae:Dtox_0924 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; Cache domain protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein YP_004120411.1 KEGG: dsa:Desal_1083 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120412.1 KEGG: sth:STH2345 micrococcal nuclease-like protein; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein) YP_004120413.1 SMART: beta-lactamase domain protein; KEGG: mem:Memar_2194 beta-lactamase domain-containing protein YP_004120414.1 KEGG: azl:AZL_024840 hypothetical protein YP_004120415.1 KEGG: rce:RC1_3116 hypothetical protein YP_004120416.1 KEGG: tps:THAPSDRAFT_20924 hypothetical protein YP_004120417.1 KEGG: dsa:Desal_3192 asparaginase/glutaminase; PFAM: Asparaginase/glutaminase; SMART: Asparaginase/glutaminase YP_004120418.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: dvm:DvMF_0864 UTP-GlnB uridylyltransferase, GlnD; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain YP_004120419.1 PFAM: nitrogen regulatory protein P-II; KEGG: dma:DMR_34880 nitrogen regulatory protein P-II YP_004120420.1 KEGG: dsa:Desal_3438 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004120421.1 KEGG: nha:Nham_0595 hypothetical protein YP_004120422.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: dma:DMR_33050 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004120423.1 manually curated; KEGG: acr:Acry_1699 hypothetical protein YP_004120424.1 PFAM: MscS Mechanosensitive ion channel; KEGG: rmr:Rmar_1058 MscS mechanosensitive ion channel YP_004120425.1 KEGG: tna:CTN_0106 magnesium transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004120426.1 KEGG: dsa:Desal_0116 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004120427.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dba:Dbac_1394 lysine exporter protein (LysE/YggA) YP_004120428.1 PFAM: protein of unknown function UPF0118; KEGG: dba:Dbac_1689 protein of unknown function UPF0118 YP_004120429.1 KEGG: dsa:Desal_0092 acetate/CoA ligase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004120430.1 KEGG: dsa:Desal_0091 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: LytTr DNA-binding region; response regulator receiver YP_004120431.1 KEGG: dwi:Dwil_GK21951 GK21951 gene product from transcript GK21951-RA YP_004120432.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: sat:SYN_02360 acetyl-CoA hydrolase/transferase YP_004120433.1 PFAM: KAP P-loop domain protein; KEGG: prw:PsycPRwf_0010 kap P-loop domain-containing protein YP_004120434.1 PFAM: protein of unknown function DUF554; KEGG: dsa:Desal_3321 protein of unknown function DUF554 YP_004120435.1 KEGG: dma:DMR_38740 hypothetical protein YP_004120436.1 PFAM: Auxin Efflux Carrier; KEGG: dba:Dbac_1205 auxin efflux carrier YP_004120437.1 SMART: beta-lactamase domain protein; KEGG: dba:Dbac_2298 beta-lactamase domain protein YP_004120438.1 PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; KEGG: dol:Dole_2117 Na+ dependent nucleoside transporter YP_004120439.1 PFAM: major facilitator superfamily MFS_1; KEGG: dat:HRM2_34570 NarK YP_004120440.1 PFAM: CheC domain protein; KEGG: dsa:Desal_3336 chemotaxis protein CheX, putative YP_004120441.1 KEGG: dsa:Desal_3335 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; PBS lyase HEAT domain protein repeat-containing protein YP_004120442.1 KEGG: dde:Dde_1837 acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like YP_004120443.1 PFAM: Domain of unkown function DUF1786 putative pyruvate format-lyase activating enzyme; KEGG: dsa:Desal_3333 hypothetical protein YP_004120444.1 PFAM: AsmA family protein; KEGG: tgr:Tgr7_2948 AsmA family protein YP_004120445.1 KEGG: dsa:Desal_2318 hypothetical protein YP_004120446.1 KEGG: dba:Dbac_1816 dimethylargininase; PFAM: amidinotransferase YP_004120447.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: dma:DMR_27290 sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; GAF domain protein YP_004120449.1 KEGG: swd:Swoo_2006 hypothetical protein YP_004120450.1 PFAM: aminotransferase class I and II; KEGG: dsa:Desal_3407 aspartate aminotransferase YP_004120451.1 KEGG: dsa:Desal_0020 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_004120452.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dsa:Desal_3687 cobalamin-5-phosphate synthase CobS YP_004120453.1 PFAM: protein of unknown function DUF62; KEGG: dma:DMR_42120 hypothetical protein YP_004120454.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: drt:Dret_2107 protein of unknown function DUF2179 YP_004120455.1 PFAM: Transcription regulator,histidine kinase sensor-like; KEGG: dal:Dalk_4091 hypothetical protein YP_004120456.1 PFAM: UspA domain-containing protein; KEGG: drt:Dret_1288 UspA domain protein YP_004120457.1 KEGG: dre:100329828 cAMP responsive element-binding protein-like YP_004120458.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004120459.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004120460.1 KEGG: cti:RALTA_A2382 putative SAM-dependent methyltransferase YP_004120461.1 PFAM: Methyltransferase type 11; KEGG: cts:Ctha_2714 methyltransferase type 11 YP_004120462.1 KEGG: mag:amb0120 hypothetical protein YP_004120463.1 PFAM: asparagine synthase; glutamine amidotransferase class-II; manually curated; KEGG: mag:amb0119 asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_004120464.1 PFAM: Methyltransferase type 11; KEGG: rca:Rcas_1028 methyltransferase type 11 YP_004120465.1 PFAM: glycosyl transferase family 2; KEGG: aae:aq_1899 dolichol-phosphate mannosyltransferase YP_004120466.1 KEGG: mag:amb0118 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120467.1 KEGG: dba:Dbac_3250 putative transcriptional regulator, GntR family YP_004120468.1 KEGG: pna:Pnap_2465 proline dehydrogenase; PFAM: Proline dehydrogenase YP_004120469.1 KEGG: dvm:DvMF_1614 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004120470.1 KEGG: avn:Avin_44230 ABC transporter protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004120471.1 TIGRFAM: methyltransferase FkbM family; KEGG: tpe:Tpen_0061 FkbM family methyltransferase YP_004120472.1 KEGG: gur:Gura_4090 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120473.1 PFAM: Radical SAM domain protein; KEGG: dfe:Dfer_0205 radical SAM domain protein YP_004120474.1 PFAM: glycosyl transferase group 1; KEGG: bav:BAV0514 O-antigen biosynthesis glycosyltranferase YP_004120475.1 PFAM: Methyltransferase type 11; KEGG: chl:Chy400_1643 methyltransferase type 11 YP_004120476.1 KEGG: npu:Npun_F1369 glycosyl transferase, group 1; manually curated; PFAM: glycosyl transferase group 1 YP_004120477.1 PFAM: Methyltransferase type 12; KEGG: plm:Plim_1935 methyltransferase type 11 YP_004120478.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: nde:NIDE2699 asparagine synthase; PFAM: asparagine synthase YP_004120479.1 manually curated; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: nde:NIDE2699 asparagine synthase; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004120480.1 PFAM: glycosyl transferase group 1; KEGG: nde:NIDE2703 putative lipopolysaccharide core biosynthesis glycosyltransferase YP_004120481.1 KEGG: ssl:SS1G_02143 hypothetical protein YP_004120482.1 manually curated; KEGG: dma:DMR_06230 hypothetical membrane protein YP_004120483.1 PFAM: CinA domain protein; KEGG: alv:Alvin_1664 CinA domain protein YP_004120484.1 KEGG: syw:SYNW1883 SMR family transporter PecM YP_004120485.1 KEGG: drt:Dret_0248 hypothetical protein YP_004120486.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: dsa:Desal_0223 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ YP_004120487.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_0799 metal dependent phosphohydrolase YP_004120488.1 PFAM: protein of unknown function DUF140; KEGG: dsa:Desal_0221 protein of unknown function DUF140 YP_004120489.1 KEGG: dma:DMR_00190 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120490.1 PFAM: Mammalian cell entry related domain protein; KEGG: dsa:Desal_0219 mammalian cell entry related domain protein YP_004120491.1 PFAM: toluene tolerance family protein; KEGG: tye:THEYE_A0882 toluene tolerance, Ttg2 superfamily YP_004120492.1 PFAM: VacJ family lipoprotein; KEGG: dvu:DVU1242 VacJ lipoprotein, putative YP_004120493.1 KEGG: dsa:Desal_0216 phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_004120494.1 KEGG: tye:THEYE_A0613 hypothetical protein YP_004120495.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: dvm:DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein YP_004120496.1 SMART: Tetratricopeptide repeat; KEGG: dsa:Desal_0270 TPR repeat-containing protein YP_004120497.1 KEGG: dsa:Desal_0269 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004120498.1 KEGG: nwa:Nwat_2024 major facilitator superfamily protein YP_004120499.1 PFAM: AMMECR1 domain protein; KEGG: dsa:Desal_0254 AMMECR1 domain protein YP_004120500.1 KEGG: dma:DMR_05490 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; Protein of unknown function DUF3391; SMART: metal-dependent phosphohydrolase HD region YP_004120502.1 KEGG: tpp:TPASS_0181 hypothetical protein YP_004120503.1 PFAM: cysteine-rich small domain; KEGG: dsa:Desal_0255 cysteine-rich small domain protein YP_004120504.1 KEGG: sfu:Sfum_2170 glucose-1-phosphate thymidylyltransferase, long form YP_004120505.1 PFAM: protein of unknown function DUF342; KEGG: dsa:Desal_0248 protein of unknown function DUF342 YP_004120506.1 PFAM: Biotin-protein ligase-like; KEGG: dsa:Desal_0249 hypothetical protein YP_004120507.1 KEGG: dsa:Desal_0250 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004120508.1 KEGG: gur:Gura_4147 hypothetical protein YP_004120509.1 KEGG: dsa:Desal_0251 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrinogen III synthase HEM4; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004120510.1 KEGG: dsa:Desal_0252 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_004120511.1 KEGG: dsa:Desal_0267 cobalamin biosynthesis protein CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein YP_004120512.1 PFAM: Protein of unknown function DUF2867; KEGG: drt:Dret_1322 NmrA family protein YP_004120513.1 KEGG: dsa:Desal_1851 hypothetical protein YP_004120514.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dsa:Desal_0748 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_004120515.1 KEGG: dsa:Desal_0752 putative transcriptional regulator, AsnC family YP_004120516.1 KEGG: dba:Dbac_3003 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_004120517.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; Cobalamin synthesis G-like; Cobalamin biosynthesis central region; KEGG: dma:DMR_02540 cobalamin biosynthesis protein CbiG YP_004120518.1 KEGG: dsa:Desal_0755 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004120519.1 PFAM: Cytochrome c, class III, conserved region; KEGG: dsa:Desal_0756 cytochrome c class III YP_004120520.1 KEGG: dsa:Desal_0757 hypothetical protein YP_004120521.1 KEGG: mpt:Mpe_A2072 hypothetical protein YP_004120522.1 PFAM: aminotransferase class I and II; KEGG: cpc:Cpar_0782 aminotransferase class I and II YP_004120523.1 KEGG: dsa:Desal_2783 transcriptional regulator, TraR/DksA family YP_004120524.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: dsa:Desal_0194 signal recognition particle protein; SMART: AAA ATPase YP_004120525.1 KEGG: dsa:Desal_0195 ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_004120526.1 KEGG: dma:DMR_34690 hypothetical protein YP_004120527.1 KEGG: dsa:Desal_0197 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_004120528.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: dsa:Desal_0198 tRNA (guanine-N1)-methyltransferase; PFAM: Protein of unknown function DUF2168; tRNA (guanine-N1-)-methyltransferase YP_004120529.1 KEGG: dsa:Desal_0199 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004120530.1 KEGG: dvl:Dvul_2147 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_004120531.1 PFAM: Uncharacterised protein family UPF0102; KEGG: dsa:Desal_0201 protein of unknown function UPF0102 YP_004120532.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dma:DMR_12980 putative methyltransferase YP_004120533.1 PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: ddf:DEFDS_1300 biotin synthetase; SMART: Elongator protein 3/MiaB/NifB; biotin and thiamin synthesis associated YP_004120534.1 PFAM: BioY protein; KEGG: acp:A2cp1_0568 BioY protein YP_004120535.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: dvl:Dvul_2150 PTS system mannose/fructose/sorbose family IID component YP_004120536.1 KEGG: dsa:Desal_0205 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004120537.1 KEGG: dma:DMR_07500 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_004120538.1 KEGG: dsa:Desal_0207 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004120539.1 KEGG: sat:SYN_02608 putative cytoplasmic protein YP_004120540.1 KEGG: dba:Dbac_2350 putative two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: AAA ATPase; response regulator receiver YP_004120541.1 PFAM: transposase IS3/IS911 family protein; KEGG: dba:Dbac_2349 transposase IS3/IS911 family protein YP_004120542.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dba:Dbac_2348 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004120543.1 PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: dba:Dbac_2347 methyl-viologen-reducing hydrogenase delta subunit YP_004120544.1 KEGG: dba:Dbac_2346 formate dehydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein YP_004120545.1 KEGG: dba:Dbac_2345 response regulator receiver protein; PFAM: response regulator receiver; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SMART: response regulator receiver YP_004120546.1 KEGG: dba:Dbac_2344 putative heterodisulfide reductase, C subunit YP_004120547.1 KEGG: dba:Dbac_2343 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein YP_004120548.1 PFAM: UspA domain-containing protein; KEGG: dba:Dbac_2342 UspA domain protein YP_004120549.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dba:Dbac_1023 protein of unknown function DUF224 cysteine-rich region domain protein YP_004120550.1 PFAM: Cytochrome c, class III, conserved region; KEGG: dal:Dalk_1820 hypothetical protein YP_004120551.1 PFAM: Polysulphide reductase NrfD; KEGG: dal:Dalk_1819 polysulphide reductase NrfD YP_004120552.1 KEGG: dal:Dalk_1818 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004120553.1 KEGG: drt:Dret_1643 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004120554.1 PFAM: FAD linked oxidase domain protein; KEGG: dsa:Desal_0210 D-lactate dehydrogenase (cytochrome) YP_004120555.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dma:DMR_07460 iron-sulfur binding protein YP_004120556.1 KEGG: cmi:CMM_1048 hypothetical protein YP_004120557.1 KEGG: dsa:Desal_0212 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SEC-C motif domain protein; SecA preprotein cross-linking region YP_004120558.1 PFAM: protein of unknown function DUF486; KEGG: dia:Dtpsy_2708 protein of unknown function DUF486 YP_004120559.1 KEGG: dba:Dbac_3006 hypothetical protein YP_004120560.1 KEGG: dsa:Desal_0759 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004120561.1 PFAM: Protein of unknown function DUF2065; KEGG: dsa:Desal_0760 hypothetical protein YP_004120562.1 KEGG: dsa:Desal_0761 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation YP_004120563.1 KEGG: dde:Dde_3188 hypothetical protein; TIGRFAM: futalosine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_004120564.1 PFAM: Polyprenyl synthetase; KEGG: dsa:Desal_0763 dimethylallyltranstransferase YP_004120565.1 KEGG: dsa:Desal_0765 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004120566.1 KEGG: dba:Dbac_0249 cytochrome c family protein YP_004120567.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; KEGG: dsa:Desal_0604 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein YP_004120568.1 PFAM: ferric-uptake regulator; KEGG: dal:Dalk_3458 ferric uptake regulator, Fur family YP_004120569.1 PFAM: Rubrerythrin; KEGG: dsa:Desal_0089 rubrerythrin YP_004120570.1 KEGG: dal:Dalk_2367 desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein YP_004120571.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dvm:DvMF_2368 rubredoxin-type Fe(Cys)4 protein YP_004120572.1 KEGG: dvm:DvMF_2479 beta-lactamase domain protein; PFAM: flavodoxin/nitric oxide synthase; SMART: beta-lactamase domain protein YP_004120573.1 PFAM: protein of unknown function DUF188; KEGG: dsa:Desal_2673 protein of unknown function DUF188 YP_004120574.1 KEGG: pjd:Pjdr2_2167 hypothetical protein; TIGRFAM: Protein of unknown function DUF2196; PFAM: Protein of unknown function DUF2196 YP_004120575.1 KEGG: dsa:Desal_0610 hypothetical protein YP_004120576.1 KEGG: dsa:Desal_0611 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SMART: von Willebrand factor type A YP_004120577.1 KEGG: dsa:Desal_0613 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004120578.1 PFAM: Organic solvent tolerance protein; KEGG: dsa:Desal_0614 organic solvent tolerance protein YP_004120579.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; MutL dimerisation; ATP-binding region ATPase domain protein; KEGG: dsa:Desal_0615 DNA mismatch repair protein MutL; SMART: MutL dimerisation; ATP-binding region ATPase domain protein YP_004120580.1 TIGRFAM: alanine racemase; KEGG: dsa:Desal_0616 alanine racemase; PFAM: alanine racemase domain protein YP_004120581.1 KEGG: dsa:Desal_0617 hypothetical protein YP_004120582.1 KEGG: gem:GM21_1105 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120583.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_2950 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_004120584.1 PFAM: phosphate transporter; KEGG: dsa:Desal_0094 phosphate transporter YP_004120585.1 PFAM: Putitive phosphate transport regulator; KEGG: dsa:Desal_0093 protein of unknown function DUF47 YP_004120586.1 KEGG: dvm:DvMF_1513 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004120587.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: dsa:Desal_3776 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004120588.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gme:Gmet_2565 transposase IS116/IS110/IS902 YP_004120589.1 PFAM: Abortive phage infection; KEGG: nmu:Nmul_A2605 hypothetical protein YP_004120590.1 KEGG: mba:Mbar_A0814 catalase; PFAM: Catalase related subgroup; Catalase domain protein YP_004120591.1 KEGG: dsa:Desal_3482 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; L-threonine-O-3-phosphate decarboxylase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; aminotransferase class I and II YP_004120592.1 KEGG: dsa:Desal_1562 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein YP_004120593.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pca:Pcar_1009 small-conductance mechanosensitive channel YP_004120594.1 PFAM: Ferritin Dps family protein; KEGG: dde:Dde_0133 bacterioferritin YP_004120595.1 TIGRFAM: signal peptidase I; KEGG: dba:Dbac_3169 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004120596.1 TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein LepA domain protein; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; KEGG: dsa:Desal_3490 GTP-binding protein LepA; SMART: elongation factor G domain-containing protein YP_004120597.1 manually curated; KEGG: dvm:DvMF_1534 hypothetical protein YP_004120598.1 manually curated; KEGG: dvm:DvMF_1533 hypothetical protein YP_004120599.1 KEGG: dvm:DvMF_1980 hypothetical protein YP_004120600.1 KEGG: dma:DMR_42290 hypothetical protein YP_004120601.1 KEGG: mes:Meso_1393 lipid-A-disaccharide synthase YP_004120602.1 KEGG: dma:DMR_42310 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004120603.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bgl:bglu_1g20150 hypothetical protein YP_004120604.1 KEGG: dde:Dde_3740 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004120605.1 KEGG: dde:Dde_3742 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004120606.1 KEGG: dde:Dde_3743 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004120607.1 KEGG: dde:Dde_3744 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120608.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: dsa:Desal_3316 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_004120609.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dde:Dde_0188 hypothetical protein YP_004120610.1 manually curated; TIGRFAM: ribosome small subunit-dependent GTPase A; KEGG: dsa:Desal_0179 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_004120612.1 KEGG: cdu:CD36_04480 biotin synthase, putative YP_004120613.1 KEGG: ppp:PHYPADRAFT_172386 hypothetical protein YP_004120614.1 KEGG: dvm:DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004120615.1 KEGG: rme:Rmet_1701 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004120616.1 PFAM: regulatory protein TetR; KEGG: plm:Plim_0557 regulatory protein TetR YP_004120617.1 PFAM: Protein of unknown function DUF3313; KEGG: gur:Gura_3853 hypothetical protein YP_004120618.1 KEGG: dsa:Desal_3080 hypothetical protein YP_004120619.1 PFAM: protein of unknown function DUF721; KEGG: dsa:Desal_3079 protein of unknown function DUF721 YP_004120620.1 PFAM: UspA domain-containing protein; KEGG: drt:Dret_0415 UspA domain protein YP_004120622.1 PFAM: AIG2 family protein; KEGG: hypothetical protein YP_004120623.1 KEGG: dsa:Desal_1730 hypothetical protein YP_004120624.1 PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: dma:DMR_20040 CoA-binding domain protein YP_004120625.1 KEGG: xne:XNC1_4558 putative tautomerase K2; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_004120626.1 PFAM: Cytochrome c, class III, conserved region; KEGG: dvm:DvMF_2598 cytochrome c class III YP_004120627.1 KEGG: dsa:Desal_1377 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004120628.1 PFAM: Polysulphide reductase NrfD; KEGG: dol:Dole_2252 polysulphide reductase NrfD YP_004120629.1 KEGG: dvl:Dvul_2408 hmc operon protein 4 YP_004120630.1 KEGG: drt:Dret_0873 hmc operon protein 5 YP_004120631.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvm:DvMF_2593 protein of unknown function DUF224 cysteine-rich region domain protein YP_004120632.1 KEGG: dma:DMR_38360 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_004120633.1 PFAM: 20S proteasome A and B subunits; KEGG: dsa:Desal_2935 ATP-dependent protease peptidase subunit YP_004120634.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; ATPase associated with various cellular activities AAA_5; Clp ATPase-like; KEGG: dsa:Desal_2936 heat shock protein HslVU, ATPase subunit HslU; SMART: AAA ATPase YP_004120635.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: msv:Mesil_0745 agmatinase YP_004120636.1 KEGG: dsa:Desal_2932 chloride channel core; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; SMART: CBS domain containing protein YP_004120637.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: dsa:Desal_2931 riboflavin biosynthesis protein RibF; SMART: Riboflavin kinase YP_004120638.1 KEGG: dsa:Desal_2930 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SMART: Tetratricopeptide repeat YP_004120639.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: dsa:Desal_2929 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_004120640.1 PFAM: transcription factor CarD; KEGG: dsa:Desal_2928 transcriptional regulator, CarD family YP_004120641.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: dsa:Desal_2927 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004120642.1 KEGG: dvl:Dvul_1559 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_004120643.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: dvm:DvMF_0487 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004120644.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: dsa:Desal_2924 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase domain protein; GHMP kinase YP_004120645.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: dvl:Dvul_1611 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004120646.1 PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dsa:Desal_2664 thiamine pyrophosphate protein TPP binding domain protein YP_004120647.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-3 domain protein; KEGG: dma:DMR_33580 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein YP_004120648.1 KEGG: dba:Dbac_1917 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120649.1 KEGG: dvm:DvMF_2792 YceI family protein; PFAM: YceI family protein; Rhodanese domain protein; SMART: Rhodanese domain protein; YceI family protein YP_004120650.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: dde:Dde_1625 formylmethanofuran dehydrogenase subunit E YP_004120651.1 KEGG: dde:Dde_1624 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120652.1 PFAM: transport system permease protein; KEGG: dde:Dde_1623 iron(III) dicitrate transport system permease protein YP_004120653.1 PFAM: periplasmic binding protein; KEGG: dal:Dalk_5080 periplasmic binding protein YP_004120654.1 KEGG: dvu:DVU0421 agmatinase, putative; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_004120655.1 KEGG: dba:Dbac_2319 carboxynorspermidine decarboxylase; TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004120656.1 PFAM: Saccharopine dehydrogenase; KEGG: dba:Dbac_2320 saccharopine dehydrogenase YP_004120657.1 KEGG: dvm:DvMF_1536 arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004120658.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: dde:Dde_3600 hypothetical protein YP_004120659.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dba:Dbac_2124 alcohol dehydrogenase zinc-binding domain protein YP_004120660.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; KEGG: dde:Dde_1418 ATPase; SMART: AAA ATPase YP_004120661.1 KEGG: dvm:DvMF_1159 type I secretion membrane fusion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein YP_004120662.1 KEGG: dvl:Dvul_1975 hypothetical protein YP_004120663.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; KEGG: dde:Dde_1421 putative PAS/PAC sensor protein; SMART: PAS domain containing protein YP_004120664.1 KEGG: dde:Dde_2418 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004120665.1 KEGG: dvl:Dvul_1978 TolC family type I secretion outer membrane protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004120666.1 TIGRFAM: outer membrane adhesin like proteiin; PFAM: Cadherin; Haemagluttinin repeat-containing protein; Hemolysin-type calcium-binding region; KEGG: dap:Dacet_2503 outer membrane adhesin like proteiin; SMART: Cadherin YP_004120667.1 KEGG: dma:DMR_17760 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004120668.1 KEGG: cpb:Cphamn1_0760 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: GCN5-related N-acetyltransferase; SMART: ATP-binding region ATPase domain protein YP_004120669.1 KEGG: cro:ROD_07171 putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase YP_004120670.1 KEGG: dsa:Desal_0736 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like YP_004120671.1 PFAM: Peptidase M23; KEGG: dsa:Desal_0737 peptidase M23 YP_004120672.1 PFAM: Exonuclease VII small subunit; KEGG: dde:Dde_2202 exodeoxyribonuclease VII small subunit YP_004120673.1 PFAM: Polyprenyl synthetase; KEGG: dsa:Desal_0739 polyprenyl synthetase YP_004120674.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dsa:Desal_0740 deoxyxylulose-5-phosphate synthase; SMART: Transketolase central region YP_004120675.1 PFAM: SEC-C motif domain protein; KEGG: dsa:Desal_0065 sec-C motif domain protein YP_004120676.1 KEGG: dma:DMR_44340 hypothetical protein; manually curated; PFAM: Class I peptide chain release factor YP_004120677.1 KEGG: dsa:Desal_0122 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease YP_004120678.1 KEGG: azl:AZL_f00990 hypothetical protein YP_004120679.1 KEGG: dsa:Desal_0791 hypothetical protein YP_004120680.1 KEGG: dvl:Dvul_2948 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004120681.1 PFAM: glutamine cyclotransferase; KEGG: mrb:Mrub_2500 glutamine cyclotransferase YP_004120682.1 PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: dal:Dalk_2023 transcriptional regulator, TetR family YP_004120683.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: dsa:Desal_2767 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_004120684.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: dde:Dde_2352 hypothetical protein YP_004120685.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; KEGG: dvl:Dvul_2372 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004120686.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: dvm:DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004120687.1 KEGG: dba:Dbac_0493 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Protein of unknown function DUF3369; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; response regulator receiver YP_004120688.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; KEGG: dsa:Desal_3383 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_004120689.1 KEGG: dde:Dde_0225 hypothetical protein YP_004120690.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; KEGG: dde:Dde_0703 methyl-accepting chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein YP_004120691.1 PFAM: EF-Hand, Calmodulin; KEGG: dae:Dtox_1948 calcium-binding EF-hand-containing protein YP_004120692.1 KEGG: dsa:Desal_0821 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004120693.1 KEGG: dsa:Desal_2394 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004120694.1 KEGG: dsa:Desal_3075 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein YP_004120695.1 KEGG: dsa:Desal_3281 hypothetical protein YP_004120696.1 KEGG: tna:CTN_0555 beta-lactamase domain protein YP_004120697.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dde:Dde_1667 TPR repeat-containing protein YP_004120698.1 KEGG: gem:GM21_1920 dienelactone hydrolase YP_004120699.1 KEGG: amu:Amuc_0623 glycosyl hydrolase BNR repeat-containing protein YP_004120700.1 KEGG: dsa:Desal_0990 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004120701.1 KEGG: drt:Dret_2409 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_004120702.1 PFAM: alpha/beta hydrolase fold; KEGG: dsa:Desal_3740 alpha/beta hydrolase fold protein YP_004120703.1 KEGG: dsa:Desal_0051 glycosyl transferase family 39 YP_004120704.1 KEGG: dps:DP0350 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004120705.1 PFAM: nitrogen regulatory protein P-II; KEGG: dps:DP0349 nitrogen regulatory protein P-II family proteins YP_004120706.1 PFAM: protein of unknown function DUF1538; KEGG: dps:DP0348 hypothetical protein YP_004120707.1 PFAM: protein of unknown function DUF1538; KEGG: dps:DP0347 major facilitator superfamily permease YP_004120708.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: dsa:Desal_3054 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_004120709.1 KEGG: dsa:Desal_3055 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004120710.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: dba:Dbac_2816 phosphoribosylanthranilate isomerase YP_004120711.1 KEGG: dma:DMR_05280 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004120712.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: dsa:Desal_3058 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_004120713.1 KEGG: dsa:Desal_3059 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004120714.1 KEGG: dsa:Desal_3060 anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004120715.1 PFAM: Prephenate dehydrogenase; KEGG: dsa:Desal_3061 prephenate dehydrogenase YP_004120716.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: dsa:Desal_3062 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004120717.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase, type II; KEGG: dvl:Dvul_2475 chorismate mutase; SMART: Chorismate mutase YP_004120718.1 PFAM: 3-dehydroquinate synthase; KEGG: dsa:Desal_3064 3-dehydroquinate synthase YP_004120719.1 TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: drt:Dret_0114 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004120720.1 KEGG: dsa:Desal_3066 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004120721.1 PFAM: nitrogen regulatory protein P-II; KEGG: drt:Dret_0112 nitrogen regulatory protein P-II YP_004120722.1 KEGG: dsa:Desal_3068 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_004120723.1 KEGG: dap:Dacet_1108 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase YP_004120724.1 PFAM: aminotransferase class-III; KEGG: dap:Dacet_1109 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004120725.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: dsa:Desal_1447 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_004120726.1 KEGG: dsa:Desal_1448 hypothetical protein YP_004120727.1 PFAM: Methyltransferase type 11; KEGG: dsa:Desal_1449 methyltransferase type 11 YP_004120728.1 PFAM: extracellular solute-binding protein family 3; KEGG: ppg:PputGB1_5028 extracellular solute-binding protein YP_004120729.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: dma:DMR_42050 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_004120730.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: dsa:Desal_2246 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_004120731.1 KEGG: dba:Dbac_1683 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_004120732.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dsa:Desal_1285 diguanylate cyclase and serine/threonine protein kinase with TPR repeats; SMART: Tetratricopeptide repeat YP_004120733.1 KEGG: dsa:Desal_3513 hypothetical protein YP_004120734.1 KEGG: dde:Dde_3016 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein YP_004120735.1 KEGG: tra:Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase YP_004120736.1 KEGG: dsa:Desal_2789 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120737.1 KEGG: dol:Dole_2760 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004120738.1 KEGG: dsa:Desal_3030 STE24 endopeptidase; PFAM: peptidase M48 Ste24p YP_004120739.1 KEGG: dsa:Desal_3029 hypothetical protein YP_004120740.1 KEGG: dsa:Desal_1084 hypothetical protein YP_004120741.1 KEGG: dsa:Desal_1085 hypothetical protein YP_004120742.1 KEGG: dma:DMR_40240 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120743.1 KEGG: app:CAP2UW1_1478 extracellular ligand-binding receptor YP_004120744.1 KEGG: dvm:DvMF_2402 nickel ABC transporter, periplasmic nickel-binding protein; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5 YP_004120745.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_2401 nickel transporter permease NikB YP_004120746.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_2400 binding-protein-dependent transport systems inner membrane component YP_004120747.1 KEGG: rru:Rru_A2274 nickel transporter ATP-binding protein NikD; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004120748.1 KEGG: azl:AZL_008810 peptide/nickel transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120749.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: dsa:Desal_2959 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_004120750.1 PFAM: Domain of unknown function DUF1844; KEGG: dsa:Desal_2960 hypothetical protein YP_004120751.1 KEGG: dsa:Desal_3290 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004120752.1 KEGG: dsa:Desal_3289 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004120753.1 KEGG: bpy:Bphyt_3976 CheW protein YP_004120754.1 PFAM: Ion transport protein; KEGG: rxy:Rxyl_1342 ion transport protein YP_004120755.1 manually curated; KEGG: drt:Dret_1282 DNA-binding protein YP_004120756.1 manually curated; KEGG: dsa:Desal_2953 hypothetical protein YP_004120757.1 KEGG: dma:DMR_00450 hypothetical protein YP_004120758.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: dal:Dalk_0216 hypothetical protein YP_004120759.1 KEGG: dvm:DvMF_0924 hypothetical protein YP_004120760.1 KEGG: dsa:Desal_2950 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_004120761.1 KEGG: dsa:Desal_1088 phosphoheptose isomerase YP_004120762.1 KEGG: dvm:DvMF_2860 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120763.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; 5TM Receptors of the LytS-YhcK type transmembrane region; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: dma:DMR_08780 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein YP_004120764.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: dde:Dde_0505 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004120765.1 KEGG: dsa:Desal_2189 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004120766.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: dsa:Desal_2190 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004120767.1 KEGG: dsa:Desal_2191 hypothetical protein YP_004120768.1 PFAM: protein of unknown function DUF81; KEGG: dsa:Desal_2192 protein of unknown function DUF81 YP_004120769.1 KEGG: dma:DMR_00510 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120770.1 KEGG: dsa:Desal_2194 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120771.1 KEGG: dsa:Desal_2195 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120772.1 KEGG: dsa:Desal_2196 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004120773.1 KEGG: dma:DMR_00510 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120774.1 KEGG: sfu:Sfum_0649 pyruvate, water dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region YP_004120775.1 PFAM: permease; KEGG: dma:DMR_12930 putative ABC transporter permease protein YP_004120776.1 KEGG: dma:DMR_12920 hypothetical membrane protein YP_004120777.1 PFAM: ferric-uptake regulator; KEGG: dba:Dbac_0621 putative ferric uptake regulator, Fur family YP_004120778.1 PFAM: periplasmic solute binding protein; KEGG: dde:Dde_2208 cation ABC transporter, periplasmc-binding protein YP_004120779.1 TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: dba:Dbac_1928 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_004120780.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dba:Dbac_1927 2-hydroxyglutaryl-CoA dehydratase D-component YP_004120781.1 KEGG: dma:DMR_11080 hypothetical protein YP_004120782.1 PFAM: pyruvate carboxyltransferase; KEGG: dsa:Desal_0448 pyruvate carboxyltransferase YP_004120783.1 TIGRFAM: nitrogenase iron protein; KEGG: dsa:Desal_0447 nitrogenase reductase; PFAM: NifH/frxC-family protein YP_004120784.1 PFAM: nitrogen regulatory protein P-II; KEGG: dsa:Desal_0446 nitrogen regulatory protein P-II YP_004120785.1 PFAM: nitrogen regulatory protein P-II; KEGG: dsa:Desal_0445 nitrogen regulatory protein P-II YP_004120786.1 KEGG: dsa:Desal_0444 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004120787.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: dsa:Desal_0443 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004120788.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dsa:Desal_0442 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004120789.1 KEGG: dsa:Desal_0441 ferredoxin, 2Fe-2S YP_004120790.1 KEGG: dsa:Desal_0439 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1 YP_004120791.1 KEGG: dsa:Desal_0438 nitrogenase; PFAM: oxidoreductase/nitrogenase component 1 YP_004120792.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: dsa:Desal_0437 nitrogenase cofactor biosynthesis protein NifB; SMART: Elongator protein 3/MiaB/NifB YP_004120793.1 KEGG: dat:HRM2_21130 hypothetical protein YP_004120794.1 KEGG: dsa:Desal_0518 transcriptional regulator, NifA, fis family; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase YP_004120795.1 KEGG: dsa:Desal_2999 hypothetical protein YP_004120796.1 KEGG: dba:Dbac_2679 periplasmic phosphate binding protein YP_004120797.1 KEGG: dba:Dbac_2680 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_004120798.1 KEGG: dba:Dbac_2681 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_004120799.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold domain protein; histidine kinase HAMP region domain protein; KEGG: dvm:DvMF_2564 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein YP_004120800.1 KEGG: dma:DMR_17740 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004120801.1 KEGG: dde:Dde_0264 hypothetical protein YP_004120802.1 KEGG: dvm:DvMF_2252 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004120803.1 KEGG: mag:amb0162 inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase YP_004120804.1 TIGRFAM: citrate synthase I; KEGG: dba:Dbac_1476 citrate synthase I; PFAM: Citrate synthase YP_004120805.1 KEGG: dsa:Desal_0829 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004120806.1 KEGG: dvl:Dvul_0243 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004120807.1 KEGG: dsa:Desal_3765 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004120808.1 PFAM: protein of unknown function DUF205; KEGG: dde:Dde_0172 membrane protein YP_004120809.1 PFAM: ribonuclease II; KEGG: dsa:Desal_1456 ribonuclease II YP_004120810.1 KEGG: bra:BRADO1077 putative signal peptide YP_004120811.1 PFAM: AICARFT/IMPCHase bienzyme formylation region; KEGG: dsa:Desal_1457 IMP cyclohydrolase; SMART: AICARFT/IMPCHase bienzyme formylation region YP_004120812.1 KEGG: afw:Anae109_2874 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120813.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Hemerythrin HHE cation binding domain protein; KEGG: dma:DMR_28950 putative methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer YP_004120814.1 KEGG: dsa:Desal_1458 hypothetical protein YP_004120815.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: dsa:Desal_1460 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004120816.1 KEGG: dsa:Desal_1461 DNA polymerase III, delta prime subunit, putative YP_004120817.1 KEGG: dsa:Desal_0956 hypothetical protein YP_004120818.1 PFAM: protein of unknown function DUF401; KEGG: dsa:Desal_3200 protein of unknown function DUF401 YP_004120819.1 KEGG: dvu:DVU1225 hypothetical protein YP_004120820.1 KEGG: drt:Dret_1487 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004120821.1 KEGG: dsa:Desal_3190 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004120822.1 PFAM: Tryptophan/tyrosine permease; KEGG: dsa:Desal_3072 aromatic amino acid permease YP_004120823.1 KEGG: sfu:Sfum_2438 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like YP_004120824.1 KEGG: dma:DMR_02260 putative rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein YP_004120825.1 KEGG: dsa:Desal_0035 17 kDa surface antigen YP_004120826.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; protein of unknown function DUF534; histidine kinase A domain protein; KEGG: dsa:Desal_2576 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; histidine kinase A domain protein YP_004120827.1 KEGG: drt:Dret_0776 putative two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_004120828.1 KEGG: dsa:Desal_1606 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004120829.1 KEGG: dma:DMR_44630 hypothetical protein YP_004120830.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain YP_004120831.1 KEGG: vsp:VS_II1397 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_004120832.1 PFAM: FAD linked oxidase domain protein; KEGG: drt:Dret_1038 FAD linked oxidase domain protein YP_004120833.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvm:DvMF_1863 protein of unknown function DUF224 cysteine-rich region domain protein YP_004120834.1 KEGG: dde:Dde_3241 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein YP_004120835.1 KEGG: dps:DP0559 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_004120836.1 PFAM: protein of unknown function DUF162; KEGG: drt:Dret_1032 protein of unknown function DUF162 YP_004120837.1 PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dsa:Desal_2567 protein of unknown function DUF162 YP_004120838.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; KEGG: dsa:Desal_3444 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein YP_004120839.1 PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: drt:Dret_2493 stress responsive alpha-beta barrel domain protein YP_004120840.1 KEGG: pfr:PFREUD_09790 PP2Cc, serine/threonine phosphatases YP_004120841.1 PFAM: extracellular solute-binding protein family 3; KEGG: hch:HCH_02210 amino acid ABC transporter periplasmic protein YP_004120842.1 PFAM: cation antiporter; KEGG: dat:HRM2_35410 MnhE YP_004120843.1 PFAM: multiple resistance and pH regulation protein F; KEGG: dat:HRM2_35400 MnhF YP_004120844.1 PFAM: Na+/H+ antiporter subunit; KEGG: dal:Dalk_4919 Na+/H+ antiporter subunit YP_004120845.1 KEGG: dak:DaAHT2_2520 hypothetical protein YP_004120846.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: dat:HRM2_35380 MnhB YP_004120847.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dat:HRM2_35370 MnhC YP_004120848.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dat:HRM2_35360 MnhD2 YP_004120849.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: dat:HRM2_35350 MnhA2 YP_004120850.1 KEGG: sfr:Sfri_2289 hypothetical protein YP_004120851.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dal:Dalk_4926 putative monovalent cation/H+ antiporter subunit D YP_004120852.1 KEGG: drt:Dret_0787 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004120853.1 KEGG: glo:Glov_1807 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004120854.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: dsa:Desal_3509 hexapaptide repeat-containing transferase YP_004120855.1 PFAM: sodium/sulphate symporter; KEGG: dsa:Desal_3508 sodium/sulphate symporter YP_004120856.1 KEGG: dde:Dde_0325 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004120857.1 KEGG: dol:Dole_1777 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120858.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dsa:Desal_3505 hypothetical protein YP_004120859.1 KEGG: dsa:Desal_3504 PAS modulated sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004120860.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: dba:Dbac_3243 ATPase, P-type (transporting), HAD superfamily, subfamily IC; SMART: cation transporting ATPase domain protein YP_004120861.1 KEGG: drt:Dret_1452 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004120862.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: tmz:Tmz1t_0615 sulphate transporter YP_004120863.1 KEGG: dma:DMR_00510 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120864.1 KEGG: pca:Pcar_2839 metal-regulated homodimeric transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004120865.1 KEGG: paa:Paes_0270 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120866.1 PFAM: ABC-2 type transporter; KEGG: paa:Paes_0271 ABC-2 type transporter YP_004120867.1 KEGG: dsa:Desal_0934 histidine kinase; PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004120868.1 KEGG: dsa:Desal_0935 hypothetical protein YP_004120869.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dsa:Desal_0936 TonB-dependent receptor plug YP_004120870.1 KEGG: dsa:Desal_0937 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004120871.1 PFAM: flagellin domain protein; KEGG: dsa:Desal_0938 flagellin domain protein YP_004120872.1 manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: dsa:Desal_0939 transcriptional regulator, LuxR family; PFAM: sigma-70 region 4 domain protein YP_004120873.1 PFAM: flagellar hook capping protein; KEGG: dvm:DvMF_1617 flagellar hook capping protein YP_004120874.1 KEGG: dsa:Desal_0941 protein of unknown function DUF1078 domain protein; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein YP_004120875.1 KEGG: dvm:DvMF_1619 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004120876.1 KEGG: dsa:Desal_0943 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_004120877.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: dsa:Desal_0944 flagellar hook-associated 2 domain protein YP_004120878.1 KEGG: dsa:Desal_3051 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004120879.1 KEGG: dsa:Desal_3050 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004120880.1 KEGG: dsa:Desal_3049 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004120881.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsa:Desal_3048 efflux transporter, RND family, MFP subunit YP_004120882.1 PFAM: acriflavin resistance protein; KEGG: dsa:Desal_3047 acriflavin resistance protein YP_004120883.1 KEGG: swd:Swoo_3964 hypothetical protein YP_004120884.1 KEGG: dak:DaAHT2_0660 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004120885.1 KEGG: reu:Reut_A1205 hypothetical protein YP_004120886.1 KEGG: sun:SUN_0885 hypothetical protein YP_004120887.1 KEGG: sun:SUN_0884 hypothetical protein YP_004120888.1 PFAM: protein of unknown function DUF214; KEGG: dsa:Desal_3536 protein of unknown function DUF214 YP_004120889.1 manually curated; PFAM: ABC transporter related; KEGG: dsa:Desal_3535 ABC transporter related; SMART: AAA ATPase YP_004120890.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PAS sensor protein; PFAM: PAS fold domain protein; secretion protein HlyD family protein; KEGG: dsa:Desal_3534 putative PAS/PAC sensor protein; SMART: PAC repeat-containing protein YP_004120891.1 PFAM: outer membrane efflux protein; KEGG: dsa:Desal_3533 outer membrane efflux protein YP_004120892.1 KEGG: glo:Glov_2512 hypothetical protein YP_004120893.1 KEGG: dal:Dalk_0080 conserved repeat domain protein YP_004120894.1 manually curated; KEGG: mrd:Mrad2831_0843 alpha/beta hydrolase domain-containing protein YP_004120895.1 KEGG: lbf:LBF_0920 two component response regulator sensor histidine kinase/response regulator subunits; PFAM: response regulator receiver; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; PAS domain containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004120896.1 KEGG: dma:DMR_18930 putative response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_004120897.1 KEGG: dat:HRM2_15040 two component protein (response regulator/sensory box histidine kinase); PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004120898.1 KEGG: rpa:RPA1401 putative glutamine synthetase III; PFAM: glutamine synthetase catalytic region YP_004120899.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: tra:Trad_0058 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_004120900.1 PFAM: extracellular solute-binding protein family 1; KEGG: rpa:RPA1395 trehalose/maltose binding protein YP_004120901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1396 sugar ABC transporter permease YP_004120902.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1397 putative sugar ABC transporter, permease protein YP_004120903.1 KEGG: rpa:RPA1398 putative sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004120904.1 KEGG: rpa:RPA1399 putative transport system ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004120905.1 PFAM: Radical SAM domain protein; KEGG: cce:Ccel_2352 radical SAM domain protein YP_004120906.1 KEGG: dvm:DvMF_1245 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; glutamine amidotransferase class-I; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004120907.1 KEGG: dma:DMR_18340 site-specific recombinase YP_004120908.1 PFAM: Auxin Efflux Carrier; KEGG: gur:Gura_4411 auxin efflux carrier YP_004120909.1 PFAM: regulatory protein TetR; KEGG: dsa:Desal_0880 transcriptional regulator, TetR family YP_004120910.1 KEGG: mma:MM_2547 putative ferredoxin YP_004120911.1 KEGG: gvi:glr4184 hypothetical protein YP_004120912.1 PFAM: cytoplasmic peptidoglycan synthetase domain protein; manually curated; KEGG: dvm:DvMF_1310 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein YP_004120913.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: dsa:Desal_2187 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase YP_004120914.1 PFAM: peptidase M18 aminopeptidase I; KEGG: dsa:Desal_2186 putative aminopeptidase 1 YP_004120915.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dma:DMR_04630 hypothetical protein YP_004120916.1 KEGG: dsa:Desal_2185 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; Elongation factor SelB winged helix 2; elongation factor Tu domain 2 protein YP_004120917.1 KEGG: gox:GOX2044 hypothetical protein YP_004120918.1 KEGG: dsa:Desal_2180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004120919.1 TIGRFAM: malate synthase G; KEGG: dvm:DvMF_2183 malate synthase G; PFAM: Malate synthase family protein YP_004120920.1 KEGG: tbd:Tbd_2289 guanylate kinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region YP_004120921.1 PFAM: protein of unknown function DUF1045; KEGG: dba:Dbac_0825 protein of unknown function DUF1045 YP_004120922.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: rle:RL0171 putative acetyltransferase YP_004120923.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: dba:Dbac_0812 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004120924.1 KEGG: mlo:mlr9277 PhnG, phosphonate metabolism protein; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG YP_004120925.1 KEGG: dde:Dde_3329 putative PhnH protein, phosphonate metabolism, function unknown; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_004120926.1 PFAM: phosphonate metabolism; KEGG: bra:BRADO5354 putative PhnI protein, phosphonate metabolism YP_004120927.1 PFAM: phosphonate metabolism PhnJ; KEGG: kpu:KP1_0362 phosphonate metabolism protein YP_004120928.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_3332 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase YP_004120929.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: dde:Dde_3333 ATPase; SMART: AAA ATPase YP_004120930.1 KEGG: dde:Dde_3334 amidohydrolase-like; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3 YP_004120931.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: dde:Dde_3324 ATPase; SMART: AAA ATPase YP_004120932.1 KEGG: dde:Dde_3325 phosphonate-binding periplasmic protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: NLPA lipoprotein YP_004120933.1 KEGG: dde:Dde_3326 phosphonate ABC transporter inner membrane protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004120934.1 KEGG: dsa:Desal_3085 hypothetical protein YP_004120935.1 KEGG: dsa:Desal_3086 hypothetical protein YP_004120936.1 KEGG: dsa:Desal_3087 hypothetical protein YP_004120937.1 PFAM: protein of unknown function DUF227; PhoU family protein; KEGG: dsa:Desal_3088 phosphate uptake regulator, PhoU YP_004120938.1 PFAM: RimK domain protein ATP-grasp; KEGG: dba:Dbac_2700 RimK domain protein ATP-grasp YP_004120939.1 PFAM: HPr serine kinase domain-containing protein; KEGG: dsa:Desal_3090 HPr kinase YP_004120940.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: dsa:Desal_3091 protein of unknown function UPF0052 and CofD YP_004120941.1 KEGG: dsa:Desal_3092 hypothetical protein YP_004120942.1 KEGG: cqu:CpipJ_CPIJ004085 adenylate cyclase YP_004120943.1 KEGG: lrf:LAR_0100 chromosome partitioning protein ParA YP_004120944.1 KEGG: drt:Dret_1126 hypothetical protein YP_004120945.1 KEGG: dma:DMR_08220 putative thiosulfate reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region YP_004120946.1 KEGG: dma:DMR_08240 iron-sulfur binding protein YP_004120947.1 PFAM: protein of unknown function DUF81; KEGG: dsa:Desal_2371 protein of unknown function DUF81 YP_004120948.1 KEGG: dal:Dalk_2527 hypothetical protein YP_004120949.1 KEGG: apo:Arcpr_0545 hypothetical protein YP_004120950.1 KEGG: dma:DMR_38690 hypothetical protein YP_004120951.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dba:Dbac_1990 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004120952.1 KEGG: dde:Dde_0603 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120953.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dsa:Desal_2676 pyruvate, water dikinase YP_004120954.1 PFAM: Dual specificity protein phosphatase; KEGG: dsa:Desal_2675 dual specificity protein phosphatase YP_004120955.1 KEGG: drt:Dret_0764 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004120956.1 KEGG: rfr:Rfer_1986 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_004120957.1 SMART: beta-lactamase domain protein; KEGG: rfr:Rfer_1985 beta-lactamase-like YP_004120958.1 KEGG: dsa:Desal_2178 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004120959.1 PFAM: PSP1 domain protein; KEGG: dsa:Desal_2177 PSP1 domain protein YP_004120960.1 KEGG: dsa:Desal_2176 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein YP_004120961.1 PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: dba:Dbac_2060 protein of unknown function DUF523 YP_004120962.1 PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: dak:DaAHT2_2616 protein of unknown function DUF523 YP_004120963.1 KEGG: drt:Dret_0319 FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein YP_004120964.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: dsa:Desal_2171 carbamoyl-phosphate synthase, large subunit; SMART: MGS domain protein YP_004120965.1 KEGG: dsa:Desal_2170 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_004120966.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: dba:Dbac_3213 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_004120967.1 KEGG: dma:DMR_34840 hypothetical protein YP_004120968.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: dsa:Desal_2168 penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004120969.1 KEGG: pla:Plav_2134 PhzF family phenazine biosynthesis protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004120970.1 PFAM: peptidase U32; KEGG: dsa:Desal_2159 peptidase U32 YP_004120971.1 PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding domain protein; KEGG: dde:Dde_0057 dihydroorotate oxidase B, electron transfer subunit YP_004120972.1 KEGG: dsa:Desal_2157 dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase YP_004120973.1 PFAM: extracellular solute-binding protein family 3; KEGG: glo:Glov_2944 hypothetical protein YP_004120974.1 PFAM: Bile acid:sodium symporter; KEGG: dsa:Desal_3012 bile acid:sodium symporter YP_004120975.1 PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dsa:Desal_1883 hypothetical protein YP_004120976.1 KEGG: rcp:RCAP_rcc00095 hemin ABC transporter permease YP_004120977.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: dvl:Dvul_1804 aromatic hydrocarbon degradation membrane protein YP_004120978.1 KEGG: dde:Dde_2953 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004120979.1 PFAM: cobalt transport protein; KEGG: dde:Dde_2975 hypothetical protein YP_004120980.1 KEGG: dma:DMR_26380 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004120981.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dap:Dacet_0527 hypothetical protein YP_004120982.1 KEGG: dsa:Desal_2030 hemolysin A; TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ YP_004120983.1 KEGG: dsa:Desal_2029 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004120984.1 PFAM: protein of unknown function DUF456; KEGG: dde:Dde_0973 hypothetical protein YP_004120985.1 KEGG: dsa:Desal_2027 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004120986.1 manually curated; TIGRFAM: replicative DNA helicase; KEGG: dsa:Desal_2026 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein YP_004120987.1 KEGG: dsa:Desal_2025 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_004120988.1 KEGG: dsa:Desal_2024 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004120989.1 KEGG: dsa:Desal_2023 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004120990.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: dsa:Desal_2021 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004120991.1 TIGRFAM: histidinol dehydrogenase; KEGG: dsa:Desal_2020 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004120992.1 KEGG: dsa:Desal_2018 hypothetical protein YP_004120993.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; UvrB/UvrC protein; Excinuclease ABC C subunit domain protein; KEGG: dsa:Desal_2017 excinuclease ABC, C subunit; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_004120994.1 SMART: beta-lactamase domain protein; KEGG: dsa:Desal_2016 beta-lactamase domain protein YP_004120995.1 KEGG: dsa:Desal_2015 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004120996.1 KEGG: pca:Pcar_0508 hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein YP_004120997.1 KEGG: cbr:CBG11075 Hypothetical protein CBG11075 YP_004120998.1 KEGG: dsa:Desal_2281 carboxylyase-related protein; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_004120999.1 KEGG: cff:CFF8240_0649 hypothetical protein YP_004121000.1 KEGG: dsa:Desal_0804 putative CheA signal transduction histidine kinase; PFAM: Hpt domain protein; SMART: Hpt domain protein YP_004121001.1 KEGG: dsa:Desal_1163 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: response regulator receiver; CheW domain protein YP_004121002.1 PFAM: Glu/Leu/Phe/Val dehydrogenase; KEGG: dde:Dde_1382 glutamate dehydrogenase (NAD) YP_004121003.1 PFAM: Redoxin domain protein; KEGG: dsa:Desal_0310 redoxin domain protein YP_004121004.1 KEGG: dde:Dde_0747 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004121005.1 PFAM: permease; KEGG: dde:Dde_0132 permease YP_004121006.1 KEGG: dat:HRM2_01000 ABC-type transporter, periplamsic substrate binding protein YP_004121007.1 KEGG: dat:HRM2_01010 ABC-type transporter, ATP-binding protein (ATPase); PFAM: ABC transporter related; SMART: AAA ATPase YP_004121008.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_01020 ABC-type transporter, permease protein (nitrate/sulfonate/bicarbonate transporter) YP_004121009.1 PFAM: PhoH family protein; KEGG: dvm:DvMF_0575 PhoH family protein YP_004121010.1 PFAM: protein of unknown function UPF0054; KEGG: dma:DMR_28860 hypothetical protein YP_004121011.1 PFAM: AAA-4 family protein; KEGG: caa:Caka_0849 putative transcriptional regulator YP_004121012.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: dba:Dbac_0246 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_004121013.1 TIGRFAM: argininosuccinate synthase; KEGG: dsa:Desal_1785 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004121014.1 KEGG: dvm:DvMF_0048 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004121015.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: dma:DMR_25740 cell division protein FtsH; PFAM: peptidase M41; AAA ATPase central domain protein YP_004121016.1 TIGRFAM: dihydropteroate synthase; KEGG: dsa:Desal_1794 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_004121017.1 PFAM: protein of unknown function DUF147; KEGG: dsa:Desal_1795 protein of unknown function DUF147 YP_004121018.1 PFAM: YbbR family protein; KEGG: dsa:Desal_1796 YbbR family protein YP_004121019.1 KEGG: dde:Dde_1517 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase YP_004121020.1 PFAM: Nucleotidyl transferase; KEGG: dsa:Desal_1798 nucleotidyl transferase YP_004121021.1 KEGG: dsa:Desal_1799 hypothetical protein YP_004121022.1 TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: dsa:Desal_1800 primosomal protein N'; SMART: helicase domain protein; DEAD-like helicase YP_004121023.1 KEGG: neu:NE1709 putative transmembrane protein; PFAM: outer membrane chaperone Skp (OmpH); SMART: PAC repeat-containing protein YP_004121024.1 PFAM: SH3 type 3 domain protein; KEGG: dsa:Desal_2257 lipopolysaccharide transport periplasmic protein LptA YP_004121025.1 KEGG: dsa:Desal_2002 hypothetical protein YP_004121026.1 KEGG: dsa:Desal_2647 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004121027.1 PFAM: thiazole biosynthesis family protein; KEGG: dsa:Desal_2648 thiazole biosynthesis family protein YP_004121028.1 TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; KEGG: dsa:Desal_2649 thiamine biosynthesis protein ThiH; SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB YP_004121029.1 KEGG: dsa:Desal_2650 thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein YP_004121030.1 KEGG: dsa:Desal_2651 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_004121031.1 KEGG: amt:Amet_4233 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004121032.1 KEGG: dar:Daro_3257 hypothetical protein YP_004121033.1 PFAM: protein of unknown function DUF534; KEGG: cvi:CV_0612 hypothetical protein YP_004121034.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pph:Ppha_1389 GCN5-related N-acetyltransferase YP_004121035.1 KEGG: tbi:Tbis_1432 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_004121036.1 KEGG: gme:Gmet_2664 radical SAM family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121037.1 KEGG: bfo:BRAFLDRAFT_88942 hypothetical protein YP_004121038.1 PFAM: glycosyl transferase family 2; KEGG: dsa:Desal_2555 glycosyl transferase family 2 YP_004121039.1 KEGG: jan:Jann_1483 lipid A biosynthesis-like YP_004121040.1 PFAM: SNARE associated Golgi protein; KEGG: dsa:Desal_2556 SNARE associated Golgi protein YP_004121041.1 KEGG: dsa:Desal_1306 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004121042.1 PFAM: glycosyl transferase group 1; KEGG: dsa:Desal_1307 glycosyl transferase group 1 YP_004121043.1 PFAM: glycosyl transferase group 1; KEGG: pca:Pcar_2590 glycosyltransferase YP_004121044.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: hya:HY04AAS1_1611 NAD-dependent epimerase/dehydratase YP_004121045.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: dma:DMR_44220 2-phosphosulfolactate phosphatase family protein YP_004121046.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: dsa:Desal_1488 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver YP_004121047.1 PFAM: extracellular solute-binding protein family 3; KEGG: dat:HRM2_27460 ABC-type amino acid transporter, periplasmic amino-acid binding protein YP_004121048.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: dvm:DvMF_1593 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_004121049.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: dsa:Desal_1490 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004121050.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvm:DvMF_1595 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004121051.1 KEGG: dvm:DvMF_1596 NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_004121052.1 KEGG: dsa:Desal_1493 NADH dehydrogenase (quinone); PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_004121053.1 KEGG: dsa:Desal_1494 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004121054.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: dvm:DvMF_1599 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004121055.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dsa:Desal_1496 NADH-ubiquinone oxidoreductase chain 4L YP_004121056.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1601 putative monovalent cation/H+ antiporter subunit D YP_004121057.1 KEGG: dvm:DvMF_1602 hypothetical protein YP_004121058.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1603 putative monovalent cation/H+ antiporter subunit D YP_004121059.1 KEGG: dsa:Desal_1500 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004121060.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1605 NADH dehydrogenase (quinone) YP_004121061.1 KEGG: dsa:Desal_1506 hypothetical protein YP_004121062.1 KEGG: dvm:DvMF_0218 hypothetical protein YP_004121063.1 PFAM: aminoglycoside phosphotransferase; KEGG: dat:HRM2_00370 conserved hypothetical protein (putative phosphotransferase) YP_004121064.1 PFAM: protein of unknown function DUF933; KEGG: rrs:RoseRS_1305 GTP-dependent nucleic acid-binding protein EngD YP_004121065.1 KEGG: dsa:Desal_1055 shikimate kinase; PFAM: shikimate kinase YP_004121066.1 KEGG: dsa:Desal_0802 H(+)-transporting two-sector ATPase; PFAM: cation transporter YP_004121067.1 KEGG: eba:ebA4900 general secretion pathway protein L YP_004121068.1 KEGG: tpv:TP01_0286 hypothetical protein YP_004121069.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: dvl:Dvul_0080 excinuclease ABC subunit C YP_004121070.1 KEGG: dsa:Desal_2298 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121071.1 PFAM: NUDIX hydrolase; KEGG: dma:DMR_16030 putative NTP pyrophosphohydrolase YP_004121072.1 KEGG: dsa:Desal_2300 methylenetetrahydrofolate reductase (NAD(P)H); PFAM: methylenetetrahydrofolate reductase YP_004121073.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: dsa:Desal_2301 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004121074.1 PFAM: aminotransferase class IV; KEGG: dsa:Desal_2302 aminotransferase class IV YP_004121075.1 PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_2150 glycosyl transferase family 2 YP_004121076.1 KEGG: scl:sce9152 putative transport/regulator protein; PFAM: cyclic nucleotide-binding; sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SMART: cyclic nucleotide-binding YP_004121077.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dsa:Desal_1644 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004121078.1 KEGG: dsa:Desal_1645 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004121079.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvm:DvMF_0834 tRNA/rRNA methyltransferase (SpoU) YP_004121080.1 PFAM: Fe-S cluster domain protein; KEGG: drt:Dret_0012 Fe-S cluster domain protein YP_004121081.1 KEGG: dde:Dde_0232 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121082.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0233 ABC transporter, permease protein YP_004121083.1 KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein YP_004121084.1 PFAM: regulatory protein LysR; KEGG: dba:Dbac_0983 putative transcriptional regulator, ModE family YP_004121085.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: dsa:Desal_1146 UBA/ThiF-type NAD/FAD binding protein YP_004121086.1 PFAM: thiamineS protein; KEGG: dma:DMR_26290 hypothetical protein YP_004121087.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: dsa:Desal_1641 aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase YP_004121088.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004121089.1 KEGG: dsa:Desal_0742 hypothetical protein YP_004121090.1 KEGG: isc:IscW_ISCW003898 hypothetical protein YP_004121091.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: dsa:Desal_0623 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein; PAC repeat-containing protein YP_004121092.1 Contains selenocysteine; manually curated; KEGG: dvl:Dvul_0771 oxidoreductase, selenocysteine-containing; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein YP_004121093.1 KEGG: mgl:MGL_1906 hypothetical protein YP_004121094.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Fe-S cluster domain protein; KEGG: dsa:Desal_1735 Fe-S cluster domain protein YP_004121095.1 KEGG: dsa:Desal_1736 electron transport complex, RnfABCDGE type, A subunit; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit YP_004121096.1 KEGG: dsa:Desal_1737 electron transport complex RsxE subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit YP_004121097.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: dsa:Desal_1738 electron transport complex, RnfABCDGE type, G subunit; SMART: FMN-binding domain protein YP_004121098.1 KEGG: dde:Dde_0582 electron transport complex, RnfABCDGE type, D subunit; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein YP_004121099.1 KEGG: dde:Dde_0581 electron transport complex protein RnfC YP_004121100.1 PFAM: Cytochrome c, class III, conserved region; KEGG: dba:Dbac_1961 cytochrome c family protein YP_004121101.1 KEGG: gau:GAU_2878 putative potassium/hydrogen antiporter YP_004121102.1 PFAM: type IV pilus assembly PilZ; KEGG: dma:DMR_17480 hypothetical protein YP_004121103.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsa:Desal_1745 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004121104.1 KEGG: dma:DMR_16110 putative response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; Tetratricopeptide repeat YP_004121105.1 KEGG: dvl:Dvul_1712 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004121106.1 KEGG: dsa:Desal_1747 hypothetical protein YP_004121107.1 KEGG: dvl:Dvul_0539 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004121108.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: dma:DMR_16100 hypothetical membrane protein YP_004121109.1 PFAM: Methyltransferase-16, putative; KEGG: dsa:Desal_2611 methyltransferase small YP_004121110.1 PFAM: protein of unknown function DUF181; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dsa:Desal_2610 protein of unknown function DUF181 YP_004121111.1 TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; KEGG: dsa:Desal_2609 sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein YP_004121112.1 KEGG: dsa:Desal_2608 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004121113.1 PFAM: protein of unknown function DUF1385; KEGG: dsa:Desal_2607 protein of unknown function DUF1385 YP_004121114.1 KEGG: dma:DMR_31280 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain protein; Class I peptide chain release factor YP_004121115.1 KEGG: dma:DMR_31270 protein methyltransferase HemK; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004121116.1 KEGG: dsa:Desal_2604 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004121117.1 KEGG: dsa:Desal_2602 hypothetical protein YP_004121118.1 KEGG: dsa:Desal_2601 hypothetical protein YP_004121119.1 KEGG: dsa:Desal_2600 hypothetical protein YP_004121120.1 PFAM: flagellar basal body-associated protein FliL; KEGG: dsa:Desal_2599 flagellar basal body-associated protein FliL YP_004121121.1 KEGG: dvm:DvMF_2010 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004121122.1 KEGG: dsa:Desal_2597 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_004121123.1 KEGG: dvm:DvMF_2012 cobyrinic acid ac-diamide synthase YP_004121124.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: dsa:Desal_2595 flagellar biosynthesis protein FlhF, putative YP_004121125.1 KEGG: dsa:Desal_2594 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_004121126.1 PFAM: type III secretion exporter; KEGG: dsa:Desal_2593 flagellar biosynthesis protein FlhB YP_004121127.1 KEGG: dsa:Desal_2592 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_004121128.1 PFAM: Peptidase M23; KEGG: dsa:Desal_2591 peptidase M23 YP_004121129.1 PFAM: PP-loop domain protein; KEGG: dsa:Desal_2590 PP-loop domain protein YP_004121130.1 KEGG: dsa:Desal_2589 hypothetical protein YP_004121131.1 KEGG: dba:Dbac_3475 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_004121132.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: dsa:Desal_2587 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004121133.1 KEGG: dde:Dde_0249 GTP cyclohydrolase subunit MoaC; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_004121134.1 KEGG: dsa:Desal_1309 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004121135.1 KEGG: dsa:Desal_1310 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004121136.1 KEGG: dsa:Desal_1311 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004121137.1 KEGG: dsa:Desal_1312 protein of unknown function UPF0153; manually curated; PFAM: protein of unknown function UPF0153 YP_004121138.1 SMART: CoA-binding domain protein; KEGG: dsa:Desal_1313 CoA-binding domain protein YP_004121139.1 PFAM: peptidase M24; creatinase; KEGG: dvm:DvMF_3039 peptidase M24 YP_004121140.1 PFAM: Protein of unknown function DUF2867; KEGG: dal:Dalk_2748 hypothetical protein YP_004121141.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dsa:Desal_1318 iron-containing alcohol dehydrogenase YP_004121142.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain-containing protein; KEGG: dsa:Desal_1321 cytochrome c biogenesis protein transmembrane region YP_004121143.1 KEGG: dsa:Desal_0961 hypothetical protein YP_004121144.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain YP_004121145.1 PFAM: ApbE family lipoprotein; major facilitator superfamily MFS_1; KEGG: dsa:Desal_0718 ApbE family lipoprotein YP_004121146.1 KEGG: sun:SUN_1302 hypothetical protein YP_004121147.1 KEGG: cpe:CPE2521 hypothetical protein YP_004121148.1 KEGG: dsa:Desal_2679 beta-lactamase domain protein; PFAM: Rhodanese domain protein; SMART: beta-lactamase domain protein; Rhodanese domain protein YP_004121149.1 KEGG: dsa:Desal_2535 hypothetical protein YP_004121150.1 KEGG: dsa:Desal_2534 Na+/Picotransporter; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter YP_004121151.1 PFAM: ABC-2 type transporter; KEGG: dsa:Desal_2343 ABC-2 type transporter YP_004121152.1 KEGG: dsa:Desal_2342 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121153.1 PFAM: secretion protein HlyD family protein; KEGG: dsa:Desal_2341 secretion protein HlyD family protein YP_004121155.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: drt:Dret_1336 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004121156.1 KEGG: dsa:Desal_2527 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004121157.1 KEGG: dsa:Desal_2526 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_004121158.1 KEGG: dsa:Desal_2525 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121159.1 KEGG: dsa:Desal_2524 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004121160.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: dsa:Desal_2523 outer membrane chaperone Skp (OmpH) YP_004121161.1 KEGG: drt:Dret_2229 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YP_004121162.1 KEGG: dsa:Desal_2521 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004121163.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: dsa:Desal_2520 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004121164.1 PFAM: protein of unknown function DUF1009; KEGG: dsa:Desal_2519 protein of unknown function DUF1009 YP_004121165.1 PFAM: protein of unknown function DUF89; KEGG: dsa:Desal_2512 protein of unknown function DUF89 YP_004121166.1 PFAM: AsmA family protein; KEGG: dde:Dde_1682 hypothetical protein YP_004121167.1 KEGG: dsa:Desal_2510 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004121168.1 PFAM: protein of unknown function DUF218; KEGG: dde:Dde_2846 hypothetical protein YP_004121169.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: dsa:Desal_2505 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_004121170.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: dsa:Desal_2504 endonuclease III; PFAM: HhH-GPD family protein YP_004121171.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: dvl:Dvul_2000 CutA1 divalent ion tolerance protein YP_004121172.1 PFAM: PfkB domain protein; KEGG: dsa:Desal_2501 PfkB domain protein YP_004121173.1 PFAM: aminoglycoside phosphotransferase; KEGG: drt:Dret_0829 hypothetical protein YP_004121174.1 PFAM: adenylylsulfate kinase; KEGG: drt:Dret_1592 putative adenylylsulfate kinase YP_004121175.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Radical SAM domain protein; protein of unknown function UPF0004; KEGG: dsa:Desal_2485 (dimethylallyl)adenosine tRNA methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB YP_004121176.1 PFAM: protein of unknown function DUF151; KEGG: drt:Dret_1590 protein of unknown function DUF151 YP_004121177.1 KEGG: dsa:Desal_2483 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004121178.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_2481 MotA/TolQ/ExbB proton channel YP_004121179.1 KEGG: dsa:Desal_2480 protein TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_004121180.1 KEGG: dsa:Desal_2479 protein TolA; TIGRFAM: protein TolA; TonB family protein; PFAM: TonB domain YP_004121181.1 PFAM: WD40-like beta Propeller containing protein; KEGG: dsa:Desal_2478 WD40 domain protein beta propeller YP_004121182.1 KEGG: dde:Dde_3633 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_004121183.1 PFAM: phosphatidylglycerophosphatase A; KEGG: dba:Dbac_0560 phosphatidylglycerophosphatase A YP_004121184.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_0429 acetyltransferase protein YP_004121185.1 KEGG: dba:Dbac_0561 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004121186.1 PFAM: OmpA/MotB domain protein; KEGG: dsa:Desal_2461 OmpA/MotB domain protein YP_004121187.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_2460 MotA3 YP_004121188.1 KEGG: dde:Dde_1461 glucokinase; PFAM: Glucokinase YP_004121189.1 KEGG: dsa:Desal_2452 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004121190.1 PFAM: basic membrane lipoprotein; KEGG: dvm:DvMF_3026 basic membrane lipoprotein YP_004121191.1 PFAM: inner-membrane translocator; KEGG: dsa:Desal_2450 inner-membrane translocator YP_004121192.1 PFAM: inner-membrane translocator; KEGG: dsa:Desal_2449 inner-membrane translocator YP_004121193.1 KEGG: dsa:Desal_2448 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121194.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: caa:Caka_1760 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004121195.1 PFAM: protein of unknown function DUF903; KEGG: dsa:Desal_2293 protein of unknown function DUF903 YP_004121196.1 PFAM: amidohydrolase 2; KEGG: dma:DMR_28960 amidohydrolase 2 family protein YP_004121197.1 PFAM: thioesterase superfamily protein; KEGG: dsa:Desal_2442 thioesterase superfamily protein YP_004121198.1 TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; KEGG: dsa:Desal_2441 proposed homoserine kinase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein YP_004121199.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: dsa:Desal_2440 homoserine dehydrogenase YP_004121200.1 PFAM: aminotransferase class I and II; KEGG: dsa:Desal_2439 aminotransferase class I and II YP_004121201.1 KEGG: dvm:DvMF_2268 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004121202.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: dsa:Desal_2436 DNA polymerase III, subunits gamma and tau; SMART: AAA ATPase YP_004121203.1 PFAM: Uncharacterised protein family UPF0133; KEGG: dsa:Desal_2435 hypothetical protein YP_004121204.1 KEGG: dsa:Desal_2434 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR YP_004121205.1 TIGRFAM: helicase, RecD/TraA family; KEGG: dsa:Desal_2433 helicase, RecD/TraA family; SMART: AAA ATPase; Helix-hairpin-helix DNA-binding class 1 YP_004121206.1 KEGG: dvl:Dvul_1565 ferritin, Dps family protein; PFAM: Ferritin Dps family protein YP_004121207.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_004121208.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; KEGG: drt:Dret_0516 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein YP_004121209.1 KEGG: dvl:Dvul_0661 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121210.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; KEGG: dvm:DvMF_0617 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; CBS domain containing protein YP_004121211.1 PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; KEGG: dsa:Desal_2328 acetyl-CoA carboxylase YP_004121212.1 KEGG: dsa:Desal_2327 pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein YP_004121213.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsa:Desal_1632 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004121214.1 KEGG: dma:DMR_40230 putative adenylate cyclase; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_004121215.1 PFAM: outer membrane efflux protein; KEGG: dsa:Desal_2858 outer membrane efflux protein YP_004121216.1 KEGG: dsa:Desal_2857 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004121217.1 KEGG: dsa:Desal_2856 type I secretion membrane fusion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein YP_004121218.1 KEGG: dma:DMR_13970 ferredoxin YP_004121219.1 KEGG: dsa:Desal_2988 protein of unknown function DUF1499 YP_004121220.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvu:DVU0947 hypothetical protein YP_004121221.1 KEGG: dba:Dbac_1917 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004121222.1 KEGG: lpn:lpg0148 hypothetical protein YP_004121223.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004121224.1 KEGG: dvu:DVU2010 ISD1, transposase OrfB; manually curated; PFAM: Integrase catalytic region YP_004121225.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004121226.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004121227.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dsa:Desal_2263 CMP/dCMP deaminase zinc-binding YP_004121228.1 KEGG: dsa:Desal_2262 phosphoribosylformylglycinamidine synthase YP_004121229.1 TIGRFAM: CTP synthase; KEGG: dsa:Desal_2261 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_004121230.1 KEGG: dsa:Desal_2260 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004121231.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: dsa:Desal_2259 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004121232.1 PFAM: protein of unknown function DUF1239; KEGG: dsa:Desal_2258 protein of unknown function DUF1239 YP_004121233.1 KEGG: dsa:Desal_2257 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; SH3 type 3 domain protein YP_004121234.1 KEGG: dde:Dde_1770 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121235.1 KEGG: dsa:Desal_2255 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region YP_004121236.1 KEGG: drt:Dret_1600 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004121237.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: dde:Dde_1773 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_004121238.1 KEGG: dsa:Desal_2252 hypothetical protein YP_004121239.1 PFAM: PTS system fructose subfamily IIA component; KEGG: dma:DMR_25830 phosphotransferase system enzyme IIA component YP_004121240.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: dsa:Desal_2250 PTS system sorbose subfamily IIB component YP_004121241.1 KEGG: dsa:Desal_2249 hypothetical protein YP_004121242.1 KEGG: dsa:Desal_2248 inorganic diphosphatase; PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein YP_004121243.1 KEGG: dsa:Desal_1588 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004121244.1 KEGG: dsa:Desal_1589 hypothetical protein YP_004121245.1 KEGG: dsa:Desal_1590 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004121246.1 KEGG: dsa:Desal_1591 flagellar synthesis regulator FleN, putative YP_004121247.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dsa:Desal_1592 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004121248.1 KEGG: dsa:Desal_1593 hypothetical protein; TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein YP_004121249.1 KEGG: dsa:Desal_1594 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004121250.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: dsa:Desal_1595 CBS domain containing protein YP_004121251.1 KEGG: dsa:Desal_1597 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_004121252.1 KEGG: dma:DMR_26040 diaminopimelate aminotransferase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004121253.1 KEGG: dsa:Desal_1599 hypothetical protein YP_004121254.1 KEGG: dvm:DvMF_0548 guanine deaminase; PFAM: amidohydrolase YP_004121255.1 KEGG: dsa:Desal_1601 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004121256.1 KEGG: dma:DMR_26010 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004121257.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: dsa:Desal_1605 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004121258.1 KEGG: dma:DMR_20640 HU_IHF family transcriptional regulator; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004121259.1 KEGG: dsa:Desal_1607 hypothetical protein YP_004121260.1 KEGG: dsa:Desal_1608 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004121261.1 KEGG: dsa:Desal_1609 GatB/YqeY family protein YP_004121262.1 KEGG: dsa:Desal_1610 Smr protein/MutS2; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004121263.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; KEGG: dsa:Desal_1611 DNA primase; SMART: Toprim sub domain-containing protein YP_004121264.1 KEGG: dma:DMR_20700 RNA polymerase sigma factor SigA; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 1.1 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2 YP_004121265.1 KEGG: dsa:Desal_1613 cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_004121266.1 KEGG: dsa:Desal_1847 hypothetical protein YP_004121267.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: dsa:Desal_1615 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004121268.1 PFAM: nucleoside diphosphate kinase; KEGG: dba:Dbac_2890 nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004121269.1 KEGG: drt:Dret_2163 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121270.1 PFAM: inner-membrane translocator; KEGG: dsa:Desal_1618 inner-membrane translocator YP_004121271.1 PFAM: protein of unknown function DUF534; KEGG: dsa:Desal_1619 protein of unknown function DUF534 YP_004121272.1 KEGG: dma:DMR_22580 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_004121273.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: dsa:Desal_1620 protein of unknown function DUF610 YibQ YP_004121274.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: dsa:Desal_1621 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004121275.1 PFAM: Peptidase M23; KEGG: dsa:Desal_1622 peptidase M23 YP_004121276.1 KEGG: drt:Dret_2157 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; Helix-hairpin-helix DNA-binding class 1 YP_004121277.1 PFAM: ribosomal L11 methyltransferase; KEGG: dsa:Desal_1624 ribosomal L11 methyltransferase YP_004121278.1 KEGG: ppp:PHYPADRAFT_44675 hypothetical protein YP_004121279.1 KEGG: dsa:Desal_1626 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_004121280.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: dsa:Desal_1627 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_004121281.1 PFAM: Na+/solute symporter; KEGG: dsa:Desal_1510 Na+/solute symporter YP_004121282.1 KEGG: drt:Dret_1846 hypothetical protein YP_004121284.1 KEGG: dsa:Desal_1630 glutamate synthase (NADPH); PFAM: ferredoxin-dependent glutamate synthase YP_004121285.1 KEGG: dsa:Desal_1631 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004121286.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsa:Desal_1632 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004121287.1 PFAM: glutamine amidotransferase class-II; KEGG: dde:Dde_1815 glutamate synthase (NADPH) GltB1 subunit YP_004121288.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: dvm:DvMF_0544 glutamate synthase alpha subunit domain protein YP_004121289.1 KEGG: dsa:Desal_1635 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_004121290.1 KEGG: dsa:Desal_1636 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004121291.1 KEGG: dsa:Desal_1637 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004121292.1 PFAM: adenylate kinase; KEGG: dsa:Desal_1973 adenylate kinase YP_004121293.1 KEGG: dde:Dde_2027 ketose-bisphosphate aldolase, class-II; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_004121294.1 KEGG: dsa:Desal_1971 hypothetical protein YP_004121295.1 KEGG: dsa:Desal_1970 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_004121296.1 PFAM: cytochrome c assembly protein; KEGG: dvm:DvMF_0297 cytochrome c assembly protein YP_004121297.1 TIGRFAM: siroheme synthase; KEGG: dma:DMR_16440 bifunctional precorrin-2 oxidase/chelatase family protein YP_004121298.1 PFAM: glycosyl transferase family 9; KEGG: dsa:Desal_1967 glycosyl transferase family 9 YP_004121299.1 KEGG: dsa:Desal_1966 CgeB family protein YP_004121300.1 KEGG: dsa:Desal_1962 recombination factor protein RarA; PFAM: MgsA AAA+ ATPase-like; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase YP_004121301.1 KEGG: dde:Dde_1997 16S ribosomal RNA methyltransferase RsmE; manually curated; PFAM: protein of unknown function DUF558 YP_004121302.1 KEGG: dsa:Desal_1960 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004121303.1 KEGG: dsa:Desal_1959 putative lipoprotein YP_004121304.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: dsa:Desal_1958 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004121305.1 KEGG: dvm:DvMF_0356 tetratricopeptide TPR_4 YP_004121306.1 KEGG: dsa:Desal_1956 hypothetical protein YP_004121307.1 PFAM: histidine triad (HIT) protein; KEGG: drt:Dret_1342 histidine triad (HIT) protein YP_004121308.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: dma:DMR_21330 hypothetical protein YP_004121309.1 KEGG: drt:Dret_1346 cyclic nucleotide-binding protein; PFAM: Polynucleotide adenylyltransferase region; CBS domain containing protein; phosphoesterase DHHA1; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein YP_004121310.1 KEGG: dsa:Desal_1953 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004121311.1 KEGG: dsa:Desal_1952 LL-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II YP_004121312.1 KEGG: dsa:Desal_1950 TRASH domain-containing protein YP_004121313.1 KEGG: dsa:Desal_1948 hypothetical protein YP_004121314.1 PFAM: carbonic anhydrase; KEGG: pca:Pcar_2939 carbonic anhydrase YP_004121315.1 manually curated; TIGRFAM: preprotein translocase, SecG subunit; KEGG: dsa:Desal_1937 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004121316.1 TIGRFAM: triosephosphate isomerase; KEGG: dvl:Dvul_1410 triose-phosphate isomerase; PFAM: triosephosphate isomerase YP_004121317.1 KEGG: dsa:Desal_1935 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004121318.1 KEGG: dsa:Desal_1934 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004121319.1 PFAM: NUDIX hydrolase; KEGG: dvm:DvMF_0346 NUDIX hydrolase YP_004121320.1 PFAM: inositol monophosphatase; KEGG: dsa:Desal_1932 inositol monophosphatase YP_004121321.1 KEGG: drt:Dret_1557 conserved hypothetical cytosolic protein YP_004121322.1 KEGG: dsa:Desal_1928 hypothetical protein YP_004121323.1 KEGG: dsa:Desal_1927 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_004121324.1 PFAM: protein of unknown function DUF374; KEGG: dsa:Desal_1902 protein of unknown function DUF374 YP_004121325.1 KEGG: dsa:Desal_1900 SirA family protein; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA-like domain-containing protein; DsrE family protein YP_004121326.1 KEGG: dsa:Desal_1899 RNA-binding S4 domain protein; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004121327.1 KEGG: drt:Dret_0805 outer membrane lipoprotein carrier protein LolA; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA YP_004121328.1 KEGG: dsa:Desal_1896 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma YP_004121329.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor KOW-like domain-containing protein; Elongation factor P ; Elongation factor P/YeiP protein; KEGG: dsa:Desal_1895 elongation factor P; SMART: Elongation factor P YP_004121330.1 KEGG: dsa:Desal_1894 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_004121331.1 KEGG: dde:Dde_1950 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004121332.1 PFAM: permease YjgP/YjgQ family protein; KEGG: dsa:Desal_1892 permease YjgP/YjgQ family protein YP_004121333.1 PFAM: permease YjgP/YjgQ family protein; KEGG: dsa:Desal_1891 permease YjgP/YjgQ family protein YP_004121334.1 KEGG: dsa:Desal_1890 hypothetical protein YP_004121335.1 KEGG: dsa:Desal_1889 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004121336.1 PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: dsa:Desal_2678 hypothetical protein YP_004121337.1 KEGG: sfu:Sfum_3775 putative phage-related protein YP_004121338.1 KEGG: dde:Dde_1935 site-specific recombinase; PFAM: Resolvase domain; Recombinase; SMART: Resolvase domain YP_004121339.1 PFAM: Protein of unknown function DUF2924; KEGG: dde:Dde_1934 putative bacteriophage-related protein YP_004121340.1 KEGG: sfu:Sfum_3778 hypothetical protein YP_004121341.1 PFAM: LexA DNA-binding domain protein; KEGG: sfu:Sfum_3779 SOS-response transcriptional repressor, LexA YP_004121342.1 KEGG: dsh:Dshi_3227 hypothetical protein YP_004121343.1 KEGG: deg:DehalGT_0233 hypothetical protein YP_004121344.1 KEGG: dde:Dde_1929 hypothetical protein YP_004121345.1 KEGG: dde:Dde_1928 sigma-24 (FecI-like); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein YP_004121346.1 KEGG: dde:Dde_1927 hypothetical protein YP_004121347.1 KEGG: sfu:Sfum_3785 hypothetical protein YP_004121348.1 KEGG: sfu:Sfum_3786 hypothetical protein YP_004121349.1 PFAM: protein of unknown function DUF669; KEGG: sfu:Sfum_3787 hypothetical protein YP_004121350.1 SMART: ERCC4 domain protein; KEGG: sfu:Sfum_3788 ERCC4 domain-containing protein YP_004121351.1 KEGG: dde:Dde_1922 ATP-dependent RecD/TraA family DNA helicase YP_004121352.1 PFAM: DNA primase catalytic core domain; KEGG: sfu:Sfum_3790 DNA primase catalytic core YP_004121353.1 KEGG: dde:Dde_1917 hypothetical protein YP_004121354.1 KEGG: dde:Dde_1916 hypothetical protein YP_004121355.1 KEGG: sfu:Sfum_3795 hypothetical protein YP_004121356.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dde:Dde_0912 integrase/recombinase YP_004121357.1 KEGG: dde:Dde_1913 hypothetical protein YP_004121358.1 KEGG: sfu:Sfum_3798 hypothetical protein YP_004121359.1 KEGG: sfu:Sfum_3799 hypothetical protein YP_004121360.1 KEGG: sfu:Sfum_3800 hypothetical protein YP_004121361.1 KEGG: dde:Dde_0917 hypothetical protein YP_004121362.1 KEGG: dde:Dde_1908 hypothetical protein YP_004121363.1 KEGG: sfu:Sfum_3803 SPP1 family phage head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7 YP_004121364.1 KEGG: tle:Tlet_1722 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121365.1 KEGG: apo:Arcpr_0300 prenyltransferase/squalene oxidase YP_004121366.1 PFAM: phenylalanyl-tRNA synthetase class IIc; KEGG: edi:EDI_190470 asparaginyl-tRNA synthetase, cytoplasmic YP_004121367.1 PFAM: amidohydrolase 2; GCN5-related N-acetyltransferase; KEGG: sat:SYN_01623 amidohydrolase YP_004121369.1 KEGG: csc:Csac_2297 hypothetical protein YP_004121370.1 KEGG: clj:CLJU_c36250 putative Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121371.1 KEGG: ttu:TERTU_2395 transcriptional regulator, AlpA family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory YP_004121372.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: sfu:Sfum_3806 D12 class N6 adenine-specific DNA methyltransferase; SMART: basic-leucine zipper (bZIP) transcription factor YP_004121373.1 KEGG: dde:Dde_0923 hypothetical protein YP_004121374.1 KEGG: dde:Dde_0924 hypothetical protein YP_004121375.1 KEGG: sfu:Sfum_3809 hypothetical protein YP_004121376.1 KEGG: sfu:Sfum_3810 hypothetical protein YP_004121377.1 KEGG: sfu:Sfum_3811 hypothetical protein YP_004121378.1 PFAM: protein of unknown function DUF646 phage head/tail component; KEGG: sfu:Sfum_3812 hypothetical protein YP_004121379.1 KEGG: sfu:Sfum_3813 hypothetical protein YP_004121380.1 KEGG: sfu:Sfum_3814 hypothetical protein YP_004121381.1 KEGG: sfu:Sfum_3815 phage tail sheath protein YP_004121382.1 KEGG: sfu:Sfum_3816 hypothetical protein YP_004121383.1 KEGG: dde:Dde_1887 hypothetical protein YP_004121384.1 KEGG: sfu:Sfum_3818 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004121385.1 KEGG: dde:Dde_1885 hypothetical protein YP_004121386.1 KEGG: sfu:Sfum_3820 hypothetical protein YP_004121387.1 KEGG: dde:Dde_0937 hypothetical protein YP_004121388.1 KEGG: dde:Dde_0938 phage protein D-like YP_004121389.1 PFAM: Peptidase M15A; KEGG: dde:Dde_1882 hypothetical protein YP_004121390.1 PFAM: protein of unknown function DUF1353; KEGG: dde:Dde_1881 hypothetical protein YP_004121391.1 KEGG: dde:Dde_1880 hypothetical protein YP_004121392.1 KEGG: sfu:Sfum_3826 hypothetical protein YP_004121393.1 KEGG: sfu:Sfum_3827 PaaR repeat-containing protein YP_004121394.1 KEGG: sfu:Sfum_3828 hypothetical protein YP_004121395.1 KEGG: dde:Dde_0944 hypothetical protein YP_004121396.1 KEGG: dde:Dde_1876 hypothetical protein YP_004121397.1 PFAM: GPW/gp25 family protein; KEGG: dde:Dde_0946 phage baseplate assembly protein W-like YP_004121398.1 PFAM: Baseplate J family protein; KEGG: dde:Dde_1874 hypothetical protein YP_004121399.1 TIGRFAM: phage tail protein; KEGG: dde:Dde_1873 phage tail protein YP_004121400.1 KEGG: sfu:Sfum_3834 hypothetical protein YP_004121401.1 KEGG: dde:Dde_1871 hypothetical protein YP_004121402.1 KEGG: dde:Dde_1870 hypothetical protein YP_004121403.1 KEGG: dde:Dde_1869 hypothetical protein YP_004121404.1 KEGG: sfu:Sfum_3838 BNR repeat-containing glycosyl hydrolase YP_004121405.1 KEGG: dde:Dde_1867 hypothetical protein YP_004121406.1 PFAM: Putative amidoligase enzyme; KEGG: dde:Dde_1866 hypothetical protein YP_004121407.1 KEGG: dde:Dde_1865 hypothetical protein YP_004121408.1 PFAM: glutamine amidotransferase class-II; KEGG: dde:Dde_1864 glucosamine 6-phosphate synthetase-like YP_004121409.1 PFAM: AIG2 family protein; KEGG: dno:DNO_0184 hypothetical protein YP_004121410.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dno:DNO_0183 hypothetical protein YP_004121411.1 PFAM: AAA ATPase central domain protein; KEGG: dno:DNO_0182 hypothetical protein YP_004121412.1 KEGG: dno:DNO_0181 hypothetical protein YP_004121413.1 PFAM: AAA-4 family protein; KEGG: pla:Plav_3556 putative transcriptional regulator YP_004121414.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: noc:Noc_0059 hypothetical protein YP_004121415.1 KEGG: mrd:Mrad2831_6518 hypothetical protein YP_004121416.1 KEGG: dno:DNO_0177 DEAD helicase domain-containing protein VrlO; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase YP_004121417.1 PFAM: PglZ domain protein; KEGG: dno:DNO_0176 hypothetical protein YP_004121418.1 KEGG: dno:DNO_0175 hypothetical protein YP_004121419.1 PFAM: MscS Mechanosensitive ion channel; KEGG: dde:Dde_1856 hypothetical protein YP_004121420.1 PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_1855 Zn-dependent protease with chaperone function-like YP_004121421.1 KEGG: dde:Dde_1854 K+-dependent Na+/Ca+ exchanger related-protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_004121422.1 KEGG: dde:Dde_1853 hypothetical protein YP_004121423.1 PFAM: glycosyl transferase group 1; KEGG: dde:Dde_1852 1,2-diacylglycerol 3-glucosyltransferase YP_004121424.1 KEGG: reh:H16_B1492 hypothetical protein YP_004121425.1 KEGG: dno:DNO_0172 hypothetical protein YP_004121426.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004121427.1 KEGG: drm:Dred_0868 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase YP_004121428.1 PFAM: Extracellular ligand-binding receptor; KEGG: dvu:DVU0738 substrate-binding protein, putative YP_004121429.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: dba:Dbac_0743 PAS/PAC sensor hybrid histidine kinase; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004121430.1 PFAM: OmpA/MotB domain protein; KEGG: dsa:Desal_3399 OmpA/MotB domain protein YP_004121431.1 PFAM: OmpA/MotB domain protein; KEGG: dsa:Desal_3352 OmpA/MotB domain protein YP_004121432.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_3351 cyclic nucleotide-binding protein YP_004121433.1 PFAM: protein of unknown function DUF342; KEGG: dde:Dde_1718 hypothetical protein YP_004121434.1 PFAM: flagellar protein FlaG protein; KEGG: dba:Dbac_2431 flagellar protein FlaG protein YP_004121435.1 KEGG: dsa:Desal_1038 hypothetical protein YP_004121436.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: dvl:Dvul_0699 (acyl-carrier-protein) phosphodiesterase YP_004121437.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilizing protein; PEP-utilising protein mobile region; KEGG: dsa:Desal_2037 pyruvate phosphate dikinase PEP/pyruvate-binding YP_004121438.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; KEGG: dba:Dbac_0873 pyruvate carboxylase YP_004121439.1 KEGG: dma:DMR_28120 putative biotin-[acetyl-CoA-carboxylase] ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase YP_004121440.1 KEGG: dsa:Desal_2042 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain YP_004121441.1 KEGG: dal:Dalk_3027 hypothetical protein YP_004121442.1 KEGG: dba:Dbac_1427 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004121443.1 KEGG: dma:DMR_42410 hypothetical protein YP_004121444.1 KEGG: dsa:Desal_2045 CoA-binding domain protein; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; SMART: CoA-binding domain protein YP_004121445.1 PFAM: glycosyl transferase group 1; KEGG: dde:Dde_0256 glycosyl transferase, group 1 family protein YP_004121446.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: dsa:Desal_1805 hypothetical protein YP_004121447.1 PFAM: regulatory protein TetR; KEGG: dsa:Desal_0719 transcriptional regulator, TetR family YP_004121448.1 PFAM: SufBD protein; KEGG: dsa:Desal_1804 SufBD protein YP_004121449.1 KEGG: dsa:Desal_1803 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121450.1 PFAM: Smr protein/MutS2; KEGG: dsa:Desal_1802 Smr protein/MutS2 YP_004121451.1 KEGG: dsa:Desal_3034 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004121452.1 PFAM: flagellin domain protein; KEGG: dba:Dbac_2252 flagellin domain-containing protein YP_004121453.1 PFAM: amino acid-binding ACT domain protein; KEGG: app:CAP2UW1_0275 acetolactate synthase 1 regulatory subunit YP_004121454.1 KEGG: dvl:Dvul_2624 acetolactate synthase catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004121455.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: gur:Gura_0096 NAD(P)H dehydrogenase (quinone) YP_004121457.1 KEGG: dsa:Desal_2757 peptidase S16 lon domain protein YP_004121458.1 PFAM: heat shock protein Hsp20; KEGG: dvm:DvMF_0311 heat shock protein HSP20 YP_004121459.1 KEGG: chu:CHU_0498 hypothetical protein YP_004121460.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; response regulator receiver; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: dsa:Desal_1525 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver YP_004121461.1 PFAM: protein of unknown function DUF493; KEGG: dsa:Desal_2003 hypothetical protein YP_004121462.1 KEGG: dvm:DvMF_2660 Fe-S cluster assembly protein NifU; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein YP_004121463.1 TIGRFAM: cysteine desulfurase NifS; KEGG: dma:DMR_17110 cysteine desulfurase; PFAM: aminotransferase class V YP_004121464.1 KEGG: dma:DMR_17120 cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004121465.1 KEGG: dma:DMR_17130 serine acetyltransferase YP_004121466.1 SMART: Tetratricopeptide repeat; KEGG: dvm:DvMF_1051 TPR repeat-containing protein YP_004121467.1 KEGG: dsa:Desal_2004 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004121468.1 TIGRFAM: lipoprotein signal peptidase; KEGG: dba:Dbac_0487 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004121469.1 KEGG: dsa:Desal_2007 hypothetical protein YP_004121470.1 KEGG: dsa:Desal_2008 tol-pal system protein YbgF YP_004121471.1 PFAM: NIL domain; KEGG: dsa:Desal_2009 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004121472.1 KEGG: dsa:Desal_2010 hypothetical protein YP_004121473.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: dsa:Desal_2011 putative chemotaxis phosphatase, CheZ YP_004121474.1 TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; KEGG: dsa:Desal_1975 magnesium transporter; SMART: CBS domain containing protein YP_004121475.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: dsa:Desal_1976 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004121476.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: dsa:Desal_1977 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_004121477.1 KEGG: dma:DMR_18190 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004121478.1 KEGG: dsa:Desal_1979 potassium uptake protein, TrkH family; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_004121479.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dsa:Desal_1980 potassium transporter peripheral membrane component YP_004121480.1 KEGG: dma:DMR_21020 sulfite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004121481.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: dal:Dalk_1201 cupin 2 conserved barrel domain protein YP_004121482.1 KEGG: dsa:Desal_2848 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004121483.1 KEGG: dma:DMR_35340 iron-sulfur binding protein YP_004121484.1 KEGG: dma:DMR_35320 Crp family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004121485.1 KEGG: dsa:Desal_1981 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_004121486.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: dsa:Desal_1982 glycyl-tRNA synthetase, beta subunit; PFAM: glycyl-tRNA synthetase beta subunit YP_004121487.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: dvm:DvMF_0290 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_004121488.1 KEGG: dsa:Desal_1984 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_004121489.1 SMART: helix-turn-helix domain protein; KEGG: drt:Dret_1689 XRE family transcriptional regulator YP_004121490.1 PFAM: SurA domain; KEGG: dsa:Desal_1986 SurA domain protein YP_004121491.1 KEGG: dsa:Desal_1987 hypothetical protein YP_004121492.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: dsa:Desal_1988 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_004121493.1 KEGG: dds:Ddes_1022 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004121494.1 KEGG: dsa:Desal_1990 hypothetical protein YP_004121495.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: dde:Dde_2042 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation YP_004121496.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: dsa:Desal_1992 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_004121497.1 KEGG: dsa:Desal_1993 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004121498.1 KEGG: dsa:Desal_1994 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein YP_004121499.1 KEGG: dal:Dalk_1651 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004121500.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: dsa:Desal_1996 protein of unknown function UPF0079 YP_004121501.1 KEGG: dsa:Desal_1997 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_004121502.1 KEGG: dsa:Desal_1998 putative alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004121503.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: dba:Dbac_3130 diguanylate phosphodiesterase YP_004121504.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dsa:Desal_1910 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YP_004121505.1 KEGG: dsa:Desal_1912 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_004121506.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dsa:Desal_1913 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004121507.1 TIGRFAM: thymidylate kinase; KEGG: dsa:Desal_1914 thymidylate kinase; PFAM: thymidylate kinase YP_004121508.1 KEGG: dsa:Desal_1908 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004121510.1 KEGG: dsa:Desal_1907 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004121511.1 KEGG: dsa:Desal_1905 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004121512.1 PFAM: glutaredoxin; KEGG: dvm:DvMF_2933 glutaredoxin YP_004121513.1 PFAM: ferredoxin thioredoxin reductase beta chain; KEGG: dde:Dde_2738 hypothetical protein YP_004121514.1 KEGG: mmb:Mmol_0710 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_004121515.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: dma:DMR_07630 O-acetylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004121516.1 TIGRFAM: gid protein; KEGG: dsa:Desal_2309 gid protein; PFAM: glucose-inhibited division protein A YP_004121517.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dsa:Desal_2310 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004121518.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dsa:Desal_2311 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004121519.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dsa:Desal_3218 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004121520.1 KEGG: dsa:Desal_3207 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein YP_004121521.1 KEGG: dba:Dbac_3135 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121522.1 KEGG: dsa:Desal_2332 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004121523.1 KEGG: dsa:Desal_2333 hypothetical protein YP_004121524.1 KEGG: dsa:Desal_0490 hypothetical protein YP_004121525.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dvu:DVU0155 type I phosphodiesterase/nucleotide pyrophosphatase family protein YP_004121526.1 KEGG: dsa:Desal_2335 UvrD/REP helicase; PFAM: UvrD/REP helicase; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004121527.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: dsa:Desal_2336 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004121528.1 PFAM: Uncharacterised protein family UPF0066; KEGG: dsa:Desal_2393 protein of unknown function UPF0066 YP_004121529.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BSU06280 putative peroxydase YP_004121530.1 KEGG: dal:Dalk_1835 hypothetical protein YP_004121531.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: dsa:Desal_2396 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase YP_004121532.1 KEGG: dsa:Desal_2397 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004121533.1 KEGG: dsa:Desal_2398 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004121534.1 KEGG: dvm:DvMF_0152 hypothetical protein YP_004121535.1 KEGG: dsa:Desal_2400 protein of unknown function DUF167; manually curated; PFAM: protein of unknown function DUF167 YP_004121536.1 TIGRFAM: DivIVA domain; KEGG: dsa:Desal_2401 DivIVA family protein YP_004121537.1 PFAM: protein of unknown function YGGT; KEGG: dsa:Desal_2402 protein of unknown function YGGT YP_004121538.1 KEGG: dsa:Desal_2403 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004121539.1 KEGG: dsa:Desal_2404 hypothetical protein YP_004121540.1 KEGG: dba:Dbac_0400 hypothetical protein YP_004121541.1 KEGG: dba:Dbac_0399 twin-arginine translocation protein, TatA/E family subunit; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004121542.1 KEGG: dsa:Desal_2408 putative lipoprotein YP_004121543.1 KEGG: dsa:Desal_2409 hypothetical protein YP_004121544.1 KEGG: aae:aq_1173 hypothetical protein; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase YP_004121545.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: dsa:Desal_2410 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_004121546.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: dvl:Dvul_1599 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_004121547.1 KEGG: dsa:Desal_2412 methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_004121548.1 KEGG: dsa:Desal_2413 beta-lactamase domain protein; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein YP_004121549.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: dma:DMR_20720 hypothetical protein YP_004121550.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dsa:Desal_2414 protein of unknown function DUF6 transmembrane YP_004121551.1 KEGG: dsa:Desal_3435 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004121552.1 KEGG: dsa:Desal_2490 hypothetical protein YP_004121553.1 TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: dsa:Desal_2491 phosphoglyceromutase; PFAM: metalloenzyme domain protein; BPG-independent PGAM domain protein YP_004121554.1 KEGG: dsa:Desal_2492 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_004121555.1 PFAM: nitroreductase; KEGG: sat:SYN_01293 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase YP_004121556.1 KEGG: dsa:Desal_2493 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004121557.1 PFAM: amino acid-binding ACT domain protein; KEGG: dma:DMR_25450 ACT domain protein YP_004121558.1 PFAM: protein of unknown function UPF0027; KEGG: nhl:Nhal_1884 protein of unknown function UPF0027 YP_004121559.1 KEGG: dsa:Desal_2496 Hpt protein; PFAM: Hpt domain protein; SMART: Hpt domain protein YP_004121560.1 PFAM: protein of unknown function DUF374; KEGG: dsa:Desal_1902 protein of unknown function DUF374 YP_004121561.1 KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004121562.1 KEGG: dma:DMR_01830 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004121563.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004121564.1 KEGG: dde:Dde_2092 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004121565.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: dde:Dde_2093 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; NAD-dependent DNA ligase OB-fold YP_004121566.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; KEGG: dvl:Dvul_1529 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_004121567.1 KEGG: dma:DMR_23660 hypothetical protein YP_004121568.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: afw:Anae109_0837 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004121569.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dsa:Desal_1830 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: AAA ATPase YP_004121570.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: dba:Dbac_2086 ATP-dependent Clp protease adaptor protein ClpS YP_004121571.1 PFAM: adenylate cyclase; KEGG: dde:Dde_2101 adenylate cyclase YP_004121572.1 KEGG: dsa:Desal_1827 CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004121573.1 PFAM: protein of unknown function DUF190; KEGG: nhl:Nhal_2425 protein of unknown function DUF190 YP_004121574.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dsa:Desal_1825 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver YP_004121575.1 KEGG: dsa:Desal_1823 CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004121576.1 KEGG: dma:DMR_25630 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Heme NO binding domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; PAS domain containing protein YP_004121577.1 PFAM: Protein of unknown function DUF2062; KEGG: dde:Dde_2062 hypothetical protein YP_004121578.1 KEGG: dsa:Desal_1821 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004121579.1 KEGG: dsa:Desal_1820 hypothetical protein YP_004121580.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: dsa:Desal_1819 outer membrane assembly lipoprotein YfiO YP_004121581.1 KEGG: dvm:DvMF_0401 thioredoxin-disulfide reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004121582.1 KEGG: dsa:Desal_1817 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004121583.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: dvl:Dvul_1322 metalloendopeptidase glycoprotease family; PFAM: peptidase M22 glycoprotease YP_004121584.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: dsa:Desal_1815 fructose-1,6-bisphosphatase YP_004121585.1 KEGG: dsa:Desal_1814 hypothetical protein YP_004121586.1 KEGG: dsa:Desal_1813 hypothetical protein YP_004121587.1 PFAM: Septum formation initiator; KEGG: dma:DMR_21600 septum formation initiator family protein YP_004121588.1 KEGG: dvm:DvMF_0408 hypothetical protein YP_004121589.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: dsa:Desal_1810 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004121590.1 PFAM: ATPase-like, ParA/MinD; KEGG: dsa:Desal_1809 Mrp protein YP_004121591.1 PFAM: protein of unknown function DUF368; KEGG: dsa:Desal_1808 protein of unknown function DUF368 YP_004121592.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: dvm:DvMF_0412 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004121593.1 KEGG: dsa:Desal_1806 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004121594.1 PFAM: Peptidase M23; KEGG: dsa:Desal_2051 peptidase M23 YP_004121595.1 KEGG: rcu:RCOM_1679050 bromodomain-containing protein, putative YP_004121596.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; KEGG: tau:Tola_2599 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like YP_004121597.1 KEGG: eel:EUBELI_00973 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_004121598.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: dsa:Desal_2059 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_004121599.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: dsa:Desal_2061 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase YP_004121600.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: dma:DMR_28170 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_004121601.1 KEGG: dsa:Desal_2063 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_004121602.1 KEGG: dsa:Desal_1774 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; Phosphomethylpyrimidine kinase YP_004121603.1 KEGG: dsa:Desal_1753 hypothetical protein YP_004121604.1 manually curated; KEGG: dsa:Desal_1752 hypothetical protein YP_004121605.1 KEGG: dsa:Desal_1733 hypothetical protein YP_004121606.1 PFAM: ROSMUCR transcriptional regulator; KEGG: dsa:Desal_3581 transcriptional regulator, MucR family YP_004121608.1 KEGG: dsa:Desal_2707 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004121609.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: dvl:Dvul_0317 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_004121610.1 PFAM: RNA binding S1 domain protein; KEGG: dba:Dbac_2022 30S ribosomal protein S1 YP_004121611.1 PFAM: pseudouridine synthase; KEGG: dsa:Desal_2710 pseudouridine synthase YP_004121612.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dsa:Desal_2711 protein of unknown function DUF6 transmembrane YP_004121613.1 PFAM: UvrD/REP helicase; KEGG: dsa:Desal_2712 exodeoxyribonuclease V YP_004121614.1 KEGG: dsa:Desal_2713 hypothetical protein YP_004121615.1 PFAM: protein of unknown function DUF296; KEGG: dma:DMR_35880 hypothetical protein YP_004121616.1 PFAM: FAD dependent oxidoreductase; KEGG: dsa:Desal_2714 FAD dependent oxidoreductase YP_004121617.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: dde:Dde_1586 2-nitropropane dioxygenase family oxidoreductase YP_004121618.1 KEGG: dsa:Desal_3199 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004121619.1 KEGG: dsa:Desal_2717 integrase family protein; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004121620.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: dsa:Desal_2718 response regulator receiver modulated diguanylate cyclase; SMART: response regulator receiver YP_004121621.1 TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: dsa:Desal_2719 putative signal transduction protein; SMART: metal-dependent phosphohydrolase HD region YP_004121622.1 KEGG: dsa:Desal_2720 hypothetical protein YP_004121623.1 KEGG: dde:Dde_1581 DNA processing protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004121624.1 KEGG: dsa:Desal_2722 tol-pal system protein YbgF; TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_1 repeat-containing protein YP_004121625.1 KEGG: dsa:Desal_2723 hypothetical protein YP_004121626.1 KEGG: xau:Xaut_4257 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004121627.1 KEGG: ara:Arad_7562 curdlan synthesis protein YP_004121628.1 KEGG: dsa:Desal_2724 CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004121629.1 KEGG: dvm:DvMF_0775 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004121630.1 PFAM: MCP methyltransferase CheR-type; KEGG: dsa:Desal_2728 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_004121631.1 SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: dsa:Desal_2729 PBS lyase heat domain protein repeat-containing protein YP_004121632.1 KEGG: dsa:Desal_2730 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_004121633.1 KEGG: xla:398090 TAP2 protein YP_004121634.1 PFAM: N-6 DNA methylase; KEGG: mav:MAV_4226 BpmI methyltransferase YP_004121635.1 KEGG: mba:Mbar_A2210 type II restriction enzyme, methylase subunit YP_004121636.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004121637.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004121638.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: dat:HRM2_03620 AlgI1 YP_004121639.1 KEGG: dat:HRM2_03610 hypothetical protein YP_004121640.1 KEGG: dat:HRM2_03630 putative virulence factor (pectin lyase fold protein) YP_004121641.1 KEGG: dat:HRM2_46450 NodC; PFAM: glycosyl transferase family 2 YP_004121642.1 PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dds:Ddes_0648 hypothetical protein YP_004121643.1 KEGG: dds:Ddes_0647 hypothetical protein YP_004121644.1 KEGG: dds:Ddes_0646 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; Ferrous iron transport B domain-containing protein; nucleoside recognition domain protein YP_004121645.1 KEGG: dds:Ddes_0645 FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein YP_004121646.1 KEGG: dds:Ddes_0644 FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein YP_004121647.1 PFAM: ferric-uptake regulator; KEGG: dde:Dde_2676 ferric uptake regulator family protein YP_004121648.1 KEGG: cim:CIMG_09306 hypothetical protein YP_004121649.1 PFAM: ferric-uptake regulator; KEGG: dsa:Desal_0460 ferric uptake regulator, Fur family YP_004121650.1 KEGG: dsa:Desal_2560 hypothetical protein YP_004121651.1 KEGG: dsa:Desal_2559 hypothetical protein YP_004121652.1 KEGG: dsa:Desal_2558 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase YP_004121653.1 PFAM: Domain of unknown function DUF1987; KEGG: dde:Dde_3045 hypothetical protein YP_004121654.1 KEGG: dde:Dde_3046 hypothetical protein YP_004121655.1 KEGG: dde:Dde_3047 serine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein YP_004121656.1 SMART: GGDEF domain containing protein; PAS domain containing protein; manually curated; KEGG: dde:Dde_3048 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein YP_004121657.1 PFAM: extracellular solute-binding protein family 3; KEGG: dba:Dbac_0639 hypothetical protein YP_004121658.1 KEGG: drt:Dret_2251 serine dehydratase alpha chain; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004121659.1 KEGG: dps:DP1235 glutamine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121660.1 KEGG: drt:Dret_2029 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004121661.1 KEGG: dsa:Desal_3368 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004121662.1 PFAM: protein of unknown function DUF296; KEGG: dma:DMR_29490 hypothetical protein YP_004121663.1 PFAM: Cytochrome c, class III, conserved region; KEGG: dsa:Desal_0756 cytochrome c class III YP_004121664.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: dsa:Desal_1585 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004121665.1 KEGG: dsa:Desal_1584 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004121666.1 KEGG: dsa:Desal_1583 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004121667.1 KEGG: dsa:Desal_1582 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004121668.1 KEGG: dsa:Desal_1581 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004121669.1 TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: drt:Dret_1461 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_004121670.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: dvu:DVU2975 hydrolase, putative YP_004121671.1 KEGG: dsa:Desal_2823 hypothetical protein YP_004121672.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: dsa:Desal_2612 transcriptional regulator, TraR/DksA family YP_004121673.1 PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: dsa:Desal_2613 protein of unknown function DUF814 YP_004121674.1 KEGG: dba:Dbac_1772 hypothetical protein YP_004121675.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: NUDIX hydrolase; HhH-GPD family protein; KEGG: drt:Dret_0892 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_004121676.1 SMART: Phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; KEGG: paa:Paes_0611 phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase YP_004121677.1 KEGG: dsa:Desal_2615 hypothetical protein YP_004121678.1 PFAM: glycosyl transferase family 2; KEGG: dsa:Desal_2617 glycosyl transferase family 2 YP_004121679.1 PFAM: glycosyl transferase group 1; KEGG: dsa:Desal_2618 glycosyl transferase group 1 YP_004121680.1 KEGG: dsa:Desal_2619 membrane-bound lytic murein transglycosylase B-like protein YP_004121681.1 KEGG: dvl:Dvul_1566 hypothetical protein YP_004121682.1 PFAM: outer membrane efflux protein; KEGG: dsa:Desal_2621 outer membrane efflux protein YP_004121683.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: dsa:Desal_2622 molybdenum cofactor synthesis domain protein; SMART: molybdopterin binding domain YP_004121684.1 PFAM: protein of unknown function DUF1614; KEGG: dsa:Desal_2623 protein of unknown function DUF1614 YP_004121685.1 KEGG: dma:DMR_39140 glucose 1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004121686.1 KEGG: dsa:Desal_2626 hypothetical protein YP_004121687.1 PFAM: type IV pilus assembly PilZ; KEGG: dsa:Desal_2627 type IV pilus assembly PilZ YP_004121688.1 KEGG: dvm:DvMF_3059 hypothetical protein YP_004121689.1 KEGG: dsa:Desal_2632 hypothetical protein YP_004121690.1 KEGG: dsa:Desal_2633 hypothetical protein YP_004121691.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mdi:METDI4988 putative acyl-CoA thioesterase precursor (TesA-like) YP_004121692.1 PFAM: SNARE associated Golgi protein; KEGG: dsa:Desal_2637 SNARE associated Golgi protein YP_004121693.1 PFAM: protein of unknown function DUF181; KEGG: dsa:Desal_2638 protein of unknown function DUF181 YP_004121694.1 PFAM: plasmid maintenance system killer; KEGG: dvl:Dvul_1454 plasmid maintenance system killer YP_004121695.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004121696.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004121697.1 KEGG: avi:Avi_5782 phosphate permease YP_004121699.1 PFAM: protein of unknown function DUF134; KEGG: rru:Rru_A1194 hypothetical protein YP_004121700.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dba:Dbac_2278 protein of unknown function DUF134 YP_004121701.1 KEGG: sfu:Sfum_3409 cobyrinic acid a,c-diamide synthase YP_004121702.1 KEGG: dba:Dbac_2276 cobyrinic acid ac-diamide synthase YP_004121703.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: sfu:Sfum_3407 dinitrogenase iron-molybdenum cofactor biosynthesis YP_004121704.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dal:Dalk_2386 regulatory protein, FmdB family; SMART: Putative regulatory protein FmdB YP_004121705.1 KEGG: sfu:Sfum_3406 response regulator receiver protein YP_004121706.1 PFAM: protein of unknown function CGGC region; KEGG: dal:Dalk_2266 hypothetical protein YP_004121707.1 PFAM: protein of unknown function DUF922; KEGG: geo:Geob_1212 protein of unknown function DUF922 YP_004121708.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase alpha subunit domain protein; KEGG: dsa:Desal_3278 glutamate synthase alpha subunit domain protein YP_004121709.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: dsa:Desal_3279 ferredoxin-dependent glutamate synthase YP_004121710.1 PFAM: glutamine amidotransferase class-II; KEGG: dsa:Desal_3280 glutamate synthase (NADPH) YP_004121711.1 PFAM: Uncharacterised protein family UPF0150; KEGG: bid:Bind_2667 hypothetical protein YP_004121712.1 KEGG: dba:Dbac_3187 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004121714.1 PFAM: MltA domain protein; 3D domain-containing protein; KEGG: dsa:Desal_1729 MltA domain protein YP_004121715.1 PFAM: protein of unknown function UPF0118; KEGG: dsa:Desal_1727 protein of unknown function UPF0118 YP_004121716.1 KEGG: dba:Dbac_1818 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004121717.1 KEGG: dsa:Desal_1720 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004121718.1 KEGG: dsa:Desal_1719 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121719.1 PFAM: Methyltransferase type 11; KEGG: mgm:Mmc1_3045 methyltransferase type 12 YP_004121720.1 KEGG: dsa:Desal_0573 hypothetical protein YP_004121721.1 PFAM: C-methyltransferase; KEGG: bja:blr5434 putative D-mycarose 3-C-methyltransferase YP_004121722.1 PFAM: C-methyltransferase; Methyltransferase domain protein; Methyltransferase type 12; KEGG: mag:amb0140 SAM-dependent methyltransferase YP_004121723.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_5657 putative short-chain dehydrogenase/reductase family protein YP_004121724.1 KEGG: bja:blr5433 hypothetical protein YP_004121725.1 KEGG: geo:Geob_0664 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121726.1 PFAM: Methyltransferase type 11; KEGG: dsa:Desal_0555 methyltransferase type 11 YP_004121727.1 KEGG: mag:amb0067 putative transketolase C-terminal section; PFAM: Transketolase domain-containing protein; Transketolase central region; SMART: Transketolase central region YP_004121728.1 KEGG: mag:amb0066 putative transketolase N-terminal section; manually curated; PFAM: Transketolase domain-containing protein YP_004121729.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bja:blr5423 dTDP-glucose-4,6 dehydratase YP_004121730.1 PFAM: sugar isomerase (SIS); KEGG: lip:LIA019 phosphoheptose isomerase YP_004121731.1 KEGG: dsa:Desal_0564 hypothetical protein YP_004121732.1 KEGG: dsa:Desal_0565 cytidyltransferase-related domain protein; TIGRFAM: cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase YP_004121733.1 PFAM: aminoglycoside phosphotransferase; KEGG: mag:amb0065 hypothetical protein YP_004121734.1 KEGG: dsa:Desal_0561 hypothetical protein YP_004121735.1 PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: sfu:Sfum_0128 glycosyl transferase family protein YP_004121736.1 KEGG: dde:Dde_3315 hypothetical protein YP_004121737.1 PFAM: glycosyl transferase family 9; KEGG: dba:Dbac_0229 glycosyl transferase family 9 YP_004121738.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: lic:LIC12176 UDP-glucose 4-epimerase YP_004121739.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bvu:BVU_4044 putative aminotransferase YP_004121740.1 SMART: SAF domain protein; TIGRFAM: N-acetylneuraminate synthase; KEGG: cco:CCC13826_2303 general stress protein 14 (GSP14); PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein YP_004121741.1 KEGG: pmx:PERMA_1624 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004121742.1 KEGG: gur:Gura_4088 nucleotidyl transferase; PFAM: Nucleotidyl transferase; CBS domain containing protein; SMART: CBS domain containing protein YP_004121743.1 PFAM: oxidoreductase domain protein; KEGG: bja:blr5995 hypothetical protein YP_004121744.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: pph:Ppha_0534 acylneuraminate cytidylyltransferase YP_004121745.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2393 short-chain dehydrogenase/reductase SDR YP_004121746.1 KEGG: glo:Glov_3399 histidine biosynthesis protein; PFAM: histidine biosynthesis protein YP_004121747.1 KEGG: geo:Geob_0691 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004121748.1 TIGRFAM: N-acetyl sugar amidotransferase; KEGG: lpa:lpa_01155 LPS biosynthesis protein, PseA-like protein YP_004121749.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: mei:Msip34_0129 hypothetical protein YP_004121750.1 KEGG: sfu:Sfum_0295 hypothetical protein YP_004121751.1 KEGG: sfu:Sfum_0294 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Na+/solute symporter; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004121752.1 KEGG: npu:Npun_F3676 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004121753.1 KEGG: cpo:COPRO5265_0030 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004121754.1 KEGG: dsa:Desal_1718 hypothetical protein YP_004121755.1 PFAM: type IV pilus assembly PilZ; KEGG: dsa:Desal_1717 type IV pilus assembly PilZ YP_004121757.1 KEGG: dal:Dalk_4623 hypothetical protein YP_004121758.1 KEGG: drt:Dret_0317 FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein YP_004121759.1 KEGG: dde:Dde_2669 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; Ferrous iron transport B domain-containing protein; nucleoside recognition domain protein YP_004121760.1 KEGG: dsa:Desal_1159 GTP-binding proten HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004121761.1 PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; KEGG: dsa:Desal_1158 IMP cyclohydrolase; SMART: MGS domain protein YP_004121762.1 KEGG: dsa:Desal_1157 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004121763.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: dsa:Desal_1156 flagellar basal body rod protein FlgB YP_004121764.1 KEGG: dsa:Desal_1155 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004121765.1 KEGG: dvl:Dvul_2667 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_004121766.1 KEGG: dsa:Desal_1153 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_004121767.1 KEGG: dsa:Desal_1152 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; MgtE intracellular region YP_004121768.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dsa:Desal_1151 flagellar assembly protein FliH, putative YP_004121769.1 TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: dsa:Desal_1150 ATPase, FliI/YscN family; SMART: AAA ATPase YP_004121770.1 KEGG: dba:Dbac_1911 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004121771.1 PFAM: AsmA family protein; KEGG: dsa:Desal_2898 AsmA family protein YP_004121772.1 KEGG: dsa:Desal_2900 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004121773.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: dsa:Desal_1344 phenylalanyl-tRNA synthetase subunit beta YP_004121774.1 KEGG: dsa:Desal_1345 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004121775.1 KEGG: drt:Dret_0046 ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004121776.1 KEGG: dds:Ddes_0488 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004121777.1 KEGG: dsa:Desal_1348 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_004121778.1 KEGG: dsa:Desal_1349 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; Anticodon-binding domain protein YP_004121779.1 KEGG: dma:DMR_38750 hypothetical protein; Contains selenocysteine; manually curated YP_004121780.1 KEGG: dvm:DvMF_2272 hypothetical protein YP_004121781.1 KEGG: dsa:Desal_1296 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004121782.1 KEGG: dsa:Desal_1297 hypothetical protein YP_004121783.1 PFAM: protein of unknown function UPF0153; KEGG: dsa:Desal_1298 protein of unknown function UPF0153 YP_004121784.1 KEGG: dde:Dde_3775 ferredoxin I YP_004121785.1 PFAM: peptidase M29 aminopeptidase II; KEGG: dsa:Desal_1300 peptidase M29 aminopeptidase II YP_004121786.1 KEGG: dsa:Desal_0836 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; SMART: molybdopterin binding domain YP_004121787.1 PFAM: isochorismatase hydrolase; KEGG: bmq:BMQ_pBM70137 acetyltransferase, GNAT family YP_004121788.1 KEGG: det:DET1280 radical SAM/B12 binding domain-containing protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121789.1 KEGG: aha:AHA_0586 protein CsaA; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain-containing protein YP_004121790.1 KEGG: dsa:Desal_1714 nucleoside recognition domain protein YP_004121791.1 KEGG: dsa:Desal_1713 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004121792.1 TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: drt:Dret_0114 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004121793.1 KEGG: sat:SYN_00227 putative cytoplasmic protein; PFAM: Hpt domain protein; SMART: Hpt domain protein YP_004121794.1 PFAM: Lytic transglycosylase catalytic; KEGG: dde:Dde_1786 membrane-bound lytic murein transglycosylase C YP_004121795.1 KEGG: dsa:Desal_2825 hypothetical protein YP_004121796.1 KEGG: dma:DMR_25580 hypothetical protein YP_004121797.1 KEGG: dsa:Desal_2827 hypothetical protein YP_004121798.1 PFAM: glycosyl transferase family 9; KEGG: dsa:Desal_2828 glycosyl transferase family 9 YP_004121799.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; KEGG: hth:HTH_1560 cyclic nucleotide-binding protein YP_004121800.1 KEGG: lsp:Bsph_1454 cation/acetate symporter ActP (acetate transporter ActP) (acetate permease); TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004121801.1 KEGG: dvm:DvMF_0240 hypothetical protein YP_004121802.1 KEGG: dsa:Desal_2835 radical SAM domain protein; PFAM: Protein of unknown function DUF2344; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121803.1 KEGG: dsa:Desal_2968 hypothetical protein YP_004121804.1 PFAM: extracellular solute-binding protein family 5; KEGG: dsa:Desal_2969 extracellular solute-binding protein family 5 YP_004121805.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_49210 DppB3 YP_004121806.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_2971 binding-protein-dependent transport systems inner membrane component YP_004121807.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dsa:Desal_2972 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004121808.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: dde:Dde_0271 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; SMART: AAA ATPase YP_004121809.1 PFAM: Protein of unknown function DUF2971; KEGG: noc:Noc_2069 hypothetical protein YP_004121810.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004121811.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004121812.1 KEGG: dsa:Desal_2584 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004121813.1 KEGG: dsa:Desal_2585 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein YP_004121814.1 PFAM: aminotransferase class I and II; KEGG: dsa:Desal_1473 putative transcriptional regulator, GntR family YP_004121815.1 KEGG: act:ACLA_040580 transcription factor TFIIIB complex subunit Brf1, putative YP_004121816.1 KEGG: dma:DMR_34310 L-tartrate dehydratase beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region YP_004121817.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: dma:DMR_34300 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_004121818.1 KEGG: dba:Dbac_3064 fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004121819.1 TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: dsa:Desal_0721 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004121820.1 PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: dba:Dbac_3066 fumarate reductase respiratory complex transmembrane subunit YP_004121821.1 PFAM: peptidase M16 domain protein; KEGG: dsa:Desal_1469 peptidase M16 domain protein YP_004121822.1 KEGG: dsa:Desal_2871 hypothetical protein YP_004121823.1 TIGRFAM: chorismate synthase; KEGG: dsa:Desal_1056 chorismate synthase; PFAM: chorismate synthase YP_004121824.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dsa:Desal_0801 TrkA-N domain protein YP_004121825.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: dsa:Desal_2772 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain YP_004121826.1 PFAM: extracellular solute-binding protein family 5; KEGG: dsa:Desal_2773 extracellular solute-binding protein family 5 YP_004121827.1 KEGG: dsa:Desal_2774 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004121828.1 KEGG: dsa:Desal_3323 hypothetical protein YP_004121829.1 KEGG: sat:SYN_02608 putative cytoplasmic protein YP_004121830.1 KEGG: dsa:Desal_2838 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004121831.1 KEGG: dsa:Desal_2839 hypothetical protein YP_004121832.1 KEGG: dsa:Desal_2840 hypothetical protein YP_004121833.1 KEGG: dvl:Dvul_1016 acetyl-CoA carboxylase; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_004121834.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: dma:DMR_12700 acetyl-CoA carboxylase biotin carboxylase subunit; SMART: biotin carboxylase domain protein YP_004121835.1 PFAM: type IV pilus assembly PilZ; KEGG: dsa:Desal_2843 type IV pilus assembly PilZ YP_004121836.1 PFAM: OmpA/MotB domain protein; KEGG: dsa:Desal_2844 OmpA/MotB domain protein YP_004121837.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_2845 MotA/TolQ/ExbB proton channel YP_004121838.1 KEGG: dde:Dde_1537 purine nucleoside phosphorylase; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1 YP_004121839.1 KEGG: dsa:Desal_2847 hypothetical protein YP_004121840.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dsa:Desal_1529 pyruvate ferredoxin/flavodoxin oxidoreductase YP_004121841.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dsa:Desal_1528 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_004121842.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: dsa:Desal_1527 2-oxoglutarate ferredoxin oxidoreductase subunit alpha YP_004121843.1 KEGG: drt:Dret_1403 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004121844.1 KEGG: dsa:Desal_1524 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH YP_004121845.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: mxa:MXAN_5719 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004121846.1 KEGG: dsa:Desal_1522 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004121847.1 manually curated; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; KEGG: dsa:Desal_1521 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004121848.1 KEGG: dvm:DvMF_3152 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004121849.1 KEGG: dsa:Desal_1519 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121850.1 KEGG: tye:THEYE_A0922 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004121851.1 PFAM: acriflavin resistance protein; KEGG: dsa:Desal_1516 acriflavin resistance protein YP_004121852.1 PFAM: glycosyl transferase family 9; KEGG: bur:Bcep18194_A5654 glycosyl transferase family protein YP_004121853.1 PFAM: zinc/iron permease; KEGG: dvm:DvMF_1916 zinc/iron permease YP_004121854.1 KEGG: dba:Dbac_2936 cytosine deaminase; PFAM: Amidohydrolase 3 YP_004121855.1 PFAM: Polysulphide reductase NrfD; KEGG: dsa:Desal_1045 polysulphide reductase NrfD YP_004121856.1 KEGG: dvl:Dvul_2270 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004121857.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsa:Desal_1043 molybdopterin oxidoreductase YP_004121858.1 PFAM: Cytochrome c, class III, conserved region; KEGG: dsa:Desal_1042 hypothetical protein YP_004121859.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: drt:Dret_0269 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase YP_004121860.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: dvm:DvMF_2692 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004121861.1 PFAM: Colicin V production protein; KEGG: dsa:Desal_1040 colicin V production protein YP_004121862.1 KEGG: dde:Dde_2453 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_004121863.1 PFAM: protein of unknown function DUF182; KEGG: dps:DP0263 hypothetical protein YP_004121864.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: dsa:Desal_0291 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004121865.1 KEGG: dvm:DvMF_3150 hypothetical protein YP_004121866.1 PFAM: Ankyrin; KEGG: spu:586288 hypothetical LOC586288 YP_004121867.1 PFAM: ferric-uptake regulator; KEGG: dde:Dde_2676 ferric uptake regulator family protein YP_004121868.1 KEGG: dsa:Desal_2825 hypothetical protein YP_004121869.1 KEGG: dvm:DvMF_3006 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_004121870.1 KEGG: dsa:Desal_3076 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004121871.1 PFAM: TOBE domain-containing protein; KEGG: dma:DMR_06550 putative molybdenum-pterin binding protein YP_004121872.1 PFAM: protein of unknown function DUF81; KEGG: dak:DaAHT2_1516 protein of unknown function DUF81 YP_004121873.1 KEGG: dsa:Desal_1029 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004121874.1 KEGG: dsa:Desal_2784 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS domain containing protein YP_004121875.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: dsa:Desal_1026 translation initiation factor, aIF-2BI family; PFAM: initiation factor 2B related YP_004121876.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; KEGG: dma:DMR_31400 aspartyl/glutamyl-tRNA amidotransferase subunit B; SMART: Asn/Gln amidotransferase YP_004121877.1 KEGG: dde:Dde_2616 hypothetical protein YP_004121878.1 PFAM: MltA domain protein; 3D domain-containing protein; KEGG: dsa:Desal_1024 MltA domain protein YP_004121879.1 KEGG: dsa:Desal_1023 hypothetical protein YP_004121880.1 PFAM: ATP-NAD/AcoX kinase; KEGG: dvm:DvMF_0581 ATP-NAD/AcoX kinase YP_004121881.1 manually curated; KEGG: dsa:Desal_1021 hypothetical protein YP_004121882.1 KEGG: dsa:Desal_1020 anti-sigma-28 factor FlgM family protein; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein YP_004121883.1 PFAM: protein of unknown function DUF180; KEGG: dsa:Desal_1019 flagellar assembly protein FliW YP_004121884.1 KEGG: dsa:Desal_1018 carbon storage regulator, CsrA; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_004121885.1 KEGG: dsa:Desal_1017 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_004121886.1 KEGG: dsa:Desal_1016 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004121887.1 PFAM: FlgN family protein; KEGG: dsa:Desal_1015 FlgN family protein YP_004121888.1 PFAM: Flagellar protein FlgJ-like; KEGG: dsa:Desal_1014 membrane protein, metalloendopeptidase-like protein YP_004121889.1 PFAM: flagellar P-ring protein; KEGG: dvm:DvMF_2521 flagellar basal body P-ring protein YP_004121890.1 PFAM: flagellar L-ring protein; KEGG: dsa:Desal_1011 flagellar basal body L-ring protein YP_004121891.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: dsa:Desal_1010 flagella basal body P-ring formation protein FlgA YP_004121892.1 KEGG: dsa:Desal_1009 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004121893.1 KEGG: dsa:Desal_1008 flagellar basal-body rod protein FlgF; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein YP_004121894.1 PFAM: protein of unknown function DUF150; KEGG: dsa:Desal_1005 protein of unknown function DUF150 YP_004121895.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; KEGG: dsa:Desal_1004 transcription elongation factor NusA; SMART: KH domain protein YP_004121896.1 PFAM: protein of unknown function DUF448; KEGG: dvm:DvMF_2514 hypothetical protein YP_004121897.1 KEGG: dsa:Desal_1002 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_004121898.1 PFAM: protein of unknown function DUF503; KEGG: dsa:Desal_1001 protein of unknown function DUF503 YP_004121899.1 KEGG: drt:Dret_0493 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004121900.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: dsa:Desal_0999 phosphoesterase RecJ domain protein YP_004121901.1 KEGG: dsa:Desal_0998 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_004121902.1 KEGG: dsa:Desal_0997 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004121903.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: dsa:Desal_0996 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; K Homology, type 1, subgroup; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding YP_004121904.1 PFAM: protein of unknown function DUF52; KEGG: dma:DMR_31670 hypothetical protein YP_004121905.1 KEGG: dsa:Desal_2983 tetratricopeptide domain protein YP_004121906.1 KEGG: dsa:Desal_2984 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004121907.1 PFAM: extracellular solute-binding protein family 3; KEGG: dba:Dbac_2973 ABC transporter, periplasmic substrate-binding protein, putative YP_004121908.1 PFAM: FAD dependent oxidoreductase; KEGG: dps:DP0272 hypothetical protein YP_004121909.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: dvl:Dvul_0472 hypothetical protein YP_004121910.1 KEGG: dma:DMR_39770 hypothetical protein YP_004121911.1 manually curated; KEGG: dsa:Desal_2991 putative GTP cyclohydrolase; PFAM: protein of unknown function DUF198 YP_004121912.1 PFAM: NikR nickel binding; KEGG: dsa:Desal_2992 nickel responsive regulator YP_004121913.1 PFAM: methyltransferase small; KEGG: dsa:Desal_2993 methyltransferase type 11 YP_004121914.1 KEGG: dba:Dbac_1107 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_004121915.1 KEGG: dsa:Desal_2995 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein-like YP_004121916.1 PFAM: Glycine cleavage system P-protein-like; KEGG: dsa:Desal_2996 glycine dehydrogenase subunit 2 YP_004121917.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dsa:Desal_2997 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004121918.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tcx:Tcr_0945 short-chain dehydrogenase/reductase SDR YP_004121919.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: dps:DP2396 hypothetical protein YP_004121920.1 KEGG: nfa:nfa12730 putative aldehyde dehydrogenase YP_004121921.1 KEGG: dsa:Desal_1277 hypothetical protein YP_004121922.1 PFAM: serine dehydratase alpha chain; KEGG: dba:Dbac_1844 protein of unknown function DUF1063 YP_004121923.1 KEGG: dsa:Desal_1275 hypothetical protein YP_004121924.1 KEGG: sus:Acid_1743 TPR repeat-containing protein YP_004121925.1 KEGG: dsa:Desal_1266 beta-lactamase domain protein; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein YP_004121926.1 KEGG: dma:DMR_37970 acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004121927.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor G domain-containing protein; KEGG: dsa:Desal_1270 elongation factor G; SMART: elongation factor G domain IV; elongation factor G domain-containing protein YP_004121928.1 KEGG: dba:Dbac_2908 hypothetical protein YP_004121929.1 KEGG: dsa:Desal_1272 radical SAM domain protein YP_004121930.1 KEGG: gme:Gmet_2565 transposase IS116/IS110/IS902 YP_004121931.1 PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_1952 glycosyl transferase family 2 YP_004121932.1 KEGG: dsa:Desal_1264 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004121933.1 KEGG: dba:Dbac_2377 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004121934.1 KEGG: dsa:Desal_1262 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004121935.1 KEGG: dsa:Desal_1261 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004121936.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: dsa:Desal_1260 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_004121937.1 PFAM: phosphatidate cytidylyltransferase; KEGG: dsa:Desal_1254 phosphatidate cytidylyltransferase YP_004121938.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: dsa:Desal_1253 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein YP_004121939.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: drt:Dret_1948 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_004121940.1 PFAM: peptidase M22 glycoprotease; KEGG: drt:Dret_1949 peptidase M22 glycoprotease YP_004121941.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: dsa:Desal_3188 chromosomal replication initiator DnaA; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_004121942.1 TIGRFAM: thymidylate synthase, flavin-dependent; KEGG: dsa:Desal_3189 FAD-dependent thymidylate synthase; PFAM: thymidylate synthase complementing protein ThyX YP_004121943.1 PFAM: Protein of unknown function DUF2721; KEGG: cph:Cpha266_1771 hypothetical protein YP_004121944.1 KEGG: dvm:DvMF_3117 hypothetical protein YP_004121945.1 KEGG: ppd:Ppro_2919 hypothetical protein YP_004121946.1 KEGG: dde:Dde_2842 hypothetical protein YP_004121947.1 KEGG: dsa:Desal_2295 CgeB family protein YP_004121948.1 PFAM: flagellin domain protein; KEGG: dsa:Desal_1250 flagellin domain protein YP_004121949.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: dsa:Desal_1249 flagellar hook-associated 2 domain protein YP_004121950.1 KEGG: dvm:DvMF_2911 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_004121951.1 PFAM: glycosyl transferase group 1; KEGG: dvm:DvMF_2910 glycosyl transferase group 1 YP_004121952.1 PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_2909 hypothetical protein YP_004121953.1 KEGG: dma:DMR_03950 hypothetical membrane protein YP_004121954.1 KEGG: dsa:Desal_1244 hypothetical protein YP_004121955.1 PFAM: OmpA/MotB domain protein; KEGG: dsa:Desal_1243 OmpA/MotB domain protein YP_004121956.1 KEGG: dba:Dbac_2391 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121957.1 KEGG: dsa:Desal_1241 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase YP_004121958.1 KEGG: dsa:Desal_1240 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121959.1 KEGG: dsa:Desal_1239 putative transcriptional regulator, AsnC family YP_004121960.1 KEGG: dsa:Desal_3692 hypothetical protein YP_004121961.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: dsa:Desal_1238 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004121962.1 KEGG: dde:Dde_2477 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121963.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dat:HRM2_29110 acetyltransferase (GNAT family protein) YP_004121964.1 PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; KEGG: dsa:Desal_1224 aldehyde dehydrogenase YP_004121965.1 KEGG: dsa:Desal_1223 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; regulatory protein ArsR; SMART: Transcription regulator AsnC-type YP_004121966.1 PFAM: protein of unknown function DUF140; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dsa:Desal_1226 protein of unknown function DUF140 YP_004121967.1 KEGG: dsa:Desal_1227 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004121968.1 PFAM: Mammalian cell entry related domain protein; KEGG: dsa:Desal_1228 mammalian cell entry related domain protein YP_004121969.1 PFAM: protein of unknown function DUF330; KEGG: dsa:Desal_1229 hypothetical protein YP_004121970.1 PFAM: protein of unknown function DUF615; KEGG: ent:Ent638_0421 hypothetical protein YP_004121971.1 KEGG: dsa:Desal_1219 hypothetical protein YP_004121972.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dsa:Desal_1218 protein of unknown function DUF6 transmembrane YP_004121973.1 PFAM: protein of unknown function DUF178; KEGG: dsa:Desal_1217 protein of unknown function DUF191 YP_004121974.1 PFAM: regulatory protein TetR; KEGG: sfu:Sfum_3090 TetR family transcriptional regulator YP_004121975.1 KEGG: dsa:Desal_1216 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004121976.1 PFAM: Radical SAM domain protein; KEGG: dsa:Desal_1215 radical SAM domain protein YP_004121977.1 PFAM: protein of unknown function DUF178; KEGG: dsa:Desal_1214 protein of unknown function DUF178 YP_004121978.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dsa:Desal_1213 transcriptional regulator, LysR family YP_004121979.1 KEGG: dde:Dde_2230 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004121980.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase insert; RNA polymerase dimerisation; KEGG: dsa:Desal_1211 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004121981.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: dsa:Desal_1210 ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_004121982.1 KEGG: dsa:Desal_1209 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004121983.1 manually curated; TIGRFAM: 30S ribosomal protein S13; KEGG: dvm:DvMF_0102 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004121984.1 manually curated; TIGRFAM: ribosomal protein L36; KEGG: dds:Ddes_0682 50S ribosomal protein L36; PFAM: ribosomal protein L36 YP_004121985.1 manually curated; TIGRFAM: methionine aminopeptidase, type I; KEGG: dvm:DvMF_0100 methionine aminopeptidase, type I; PFAM: peptidase M24 YP_004121986.1 KEGG: dsa:Desal_1205 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_004121987.1 KEGG: dsa:Desal_1204 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15 YP_004121988.1 KEGG: dde:Dde_2239 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004121989.1 KEGG: dsa:Desal_1202 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5 YP_004121990.1 KEGG: dma:DMR_12360 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004121991.1 KEGG: dsa:Desal_1200 ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_004121992.1 PFAM: ribosomal protein S8; KEGG: dsa:Desal_1199 30S ribosomal protein S8 YP_004121993.1 KEGG: dsa:Desal_1198 ribosomal protein S14; manually curated; PFAM: ribosomal protein S14 YP_004121994.1 KEGG: dma:DMR_12320 50S ribosomal protein L5 YP_004121995.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: dvm:DvMF_0090 50S ribosomal protein L24; SMART: KOW domain protein YP_004121996.1 KEGG: dsa:Desal_1195 ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004121997.1 KEGG: dsa:Desal_1194 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004121998.1 KEGG: dsa:Desal_1193 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004121999.1 KEGG: dsa:Desal_1192 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004122000.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: dsa:Desal_1191 30S ribosomal protein S3; SMART: KH domain protein YP_004122001.1 KEGG: dsa:Desal_1190 ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004122002.1 KEGG: dds:Ddes_0664 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004122003.1 KEGG: dsa:Desal_1188 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004122004.1 PFAM: Ribosomal protein L25/L23; KEGG: dsa:Desal_1187 50S ribosomal protein L23 YP_004122005.1 PFAM: ribosomal protein L4/L1e; KEGG: dsa:Desal_1186 50S ribosomal protein L4 YP_004122006.1 KEGG: dsa:Desal_1185 ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004122007.1 KEGG: dsa:Desal_1184 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004122008.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain IV; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; KEGG: dsa:Desal_1183 elongation factor G; SMART: elongation factor G domain IV; elongation factor G domain-containing protein YP_004122009.1 KEGG: dsa:Desal_1182 ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_004122010.1 KEGG: dsa:Desal_1181 ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004122011.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; KEGG: dsa:Desal_1180 DNA-directed RNA polymerase, beta' subunit; SMART: RNA polymerase I subunit A domain protein YP_004122012.1 KEGG: dsa:Desal_1179 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 7; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain YP_004122013.1 KEGG: dde:Dde_2995 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_004122014.1 PFAM: ribosomal protein L10; KEGG: dsa:Desal_1177 50S ribosomal protein L10 YP_004122015.1 KEGG: dsa:Desal_1176 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004122016.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: pca:Pcar_0690 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_004122017.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: dsa:Desal_1174 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein YP_004122018.1 KEGG: dsa:Desal_1173 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004122019.1 KEGG: dvl:Dvul_0446 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004122020.1 KEGG: dsa:Desal_1171 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain-containing protein; elongation factor Tu domain 2 protein YP_004122021.1 PFAM: dihydrouridine synthase DuS; KEGG: dsa:Desal_1170 dihydrouridine synthase DuS YP_004122022.1 KEGG: dde:Dde_0391 response regulator receiver (CheY-like) modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver YP_004122023.1 KEGG: dsa:Desal_1166 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004122024.1 KEGG: dsa:Desal_1165 hydrogenase formation HypD protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_004122025.1 KEGG: sma:SAV_7299 glycine-rich protein YP_004122026.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: sfu:Sfum_3410 dinitrogenase iron-molybdenum cofactor biosynthesis YP_004122027.1 KEGG: dsa:Desal_0982 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004122028.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: dsa:Desal_0981 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004122029.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; KEGG: dsa:Desal_0980 three-deoxy-D-manno-octulosonic-acid transferase domain protein YP_004122030.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: dsa:Desal_0979 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_004122031.1 KEGG: dma:DMR_20320 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_004122032.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dsa:Desal_0977 TPR repeat-containing protein YP_004122034.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dvm:DvMF_2358 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004122035.1 KEGG: dsa:Desal_0976 hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004122036.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: dvl:Dvul_1001 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_004122037.1 PFAM: NUDIX hydrolase; KEGG: dde:Dde_2287 MutT/NUDIX family protein YP_004122038.1 KEGG: dsa:Desal_2795 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_004122039.1 KEGG: dsa:Desal_2797 tRNA guanosine-2'-O-methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004122040.1 KEGG: dsa:Desal_2798 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122041.1 KEGG: dsa:Desal_2799 putative CheA signal transduction histidine kinase; PFAM: Hpt domain protein; SMART: Hpt domain protein YP_004122042.1 KEGG: dsa:Desal_2800 putative CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; CheW domain protein YP_004122043.1 PFAM: anaerobic cobalt chelatase; KEGG: dat:HRM2_07680 CbiK1 YP_004122044.1 PFAM: transport system permease protein; KEGG: dps:DP0215 Fe(III) ABC-transporter, permease protein YP_004122045.1 KEGG: dak:DaAHT2_1579 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122046.1 PFAM: periplasmic binding protein; KEGG: dak:DaAHT2_1580 periplasmic binding protein YP_004122047.1 TIGRFAM: precorrin-2 C20-methyltransferase; KEGG: dvu:DVU0646 precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004122048.1 PFAM: anaerobic cobalt chelatase; KEGG: dal:Dalk_0440 anaerobic cobalt chelatase YP_004122049.1 KEGG: dsa:Desal_0973 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004122050.1 PFAM: O-methyltransferase family 2; KEGG: dsa:Desal_0974 methyltransferase type 12 YP_004122051.1 KEGG: dsa:Desal_2803 iron-sulfur cluster-binding protein, putative YP_004122052.1 PFAM: Ribosomal small subunit Rsm22; KEGG: dsa:Desal_2804 ribosomal small subunit Rsm22 YP_004122053.1 TIGRFAM: lipoate-protein ligase B; KEGG: dvl:Dvul_2078 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_004122054.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: dde:Dde_2714 lipoyl synthase; PFAM: Radical SAM domain protein YP_004122055.1 KEGG: dsa:Desal_2066 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_004122056.1 KEGG: dba:Dbac_1363 hypothetical protein YP_004122057.1 PFAM: DsrE family protein; KEGG: dvl:Dvul_0884 DsrE family protein YP_004122058.1 PFAM: Bile acid:sodium symporter; KEGG: dsa:Desal_2065 bile acid:sodium symporter YP_004122059.1 PFAM: UspA domain-containing protein; KEGG: drt:Dret_1199 bile acid:sodium symporter YP_004122060.1 KEGG: dsa:Desal_2815 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004122061.1 KEGG: dvl:Dvul_2081 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_004122062.1 KEGG: dma:DMR_32870 hypothetical protein YP_004122063.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: dde:Dde_2718 orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004122064.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: dsa:Desal_2818 guanylate kinase; PFAM: guanylate kinase YP_004122065.1 PFAM: protein of unknown function DUF370; KEGG: dsa:Desal_2819 hypothetical protein YP_004122066.1 PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: dsa:Desal_2820 hypothetical protein YP_004122067.1 KEGG: dba:Dbac_2899 GTP-binding protein YP_004122068.1 TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; protein of unknown function UPF0004; KEGG: dvu:DVU0897 RNA modification protein; SMART: Elongator protein 3/MiaB/NifB YP_004122069.1 KEGG: pph:Ppha_1875 TPR repeat-containing protein YP_004122070.1 KEGG: dba:Dbac_3171 peptidase M48 Ste24p YP_004122071.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: dsa:Desal_1579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004122072.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dal:Dalk_0861 glycerol dehydrogenase YP_004122073.1 PFAM: peptidase U34 dipeptidase; KEGG: dze:Dd1591_0965 peptidase U34 dipeptidase YP_004122074.1 KEGG: dsa:Desal_1563 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_004122075.1 KEGG: dsa:Desal_1564 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_004122076.1 KEGG: dsa:Desal_1565 hypothetical protein YP_004122077.1 KEGG: dsa:Desal_1566 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004122078.1 PFAM: GrpE protein; KEGG: dsa:Desal_1567 GrpE protein YP_004122079.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ter:Tery_3497 peptidase-like YP_004122080.1 PFAM: peptidase M29 aminopeptidase II; KEGG: dsa:Desal_1568 peptidase M29 aminopeptidase II YP_004122081.1 PFAM: alpha/beta hydrolase fold; KEGG: dde:Dde_1531 hypothetical protein YP_004122082.1 KEGG: dsa:Desal_0951 drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004122083.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dma:DMR_30670 chaperone ClpB; SMART: AAA ATPase YP_004122084.1 KEGG: drt:Dret_1857 hypothetical protein YP_004122085.1 KEGG: dsa:Desal_1574 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004122086.1 PFAM: transport-associated; KEGG: dvm:DvMF_2802 transport-associated YP_004122087.1 TIGRFAM: phosphonopyruvate decarboxylase-related protein; KEGG: dak:DaAHT2_2657 phosphonopyruvate decarboxylase-related protein; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein YP_004122088.1 PFAM: Rhomboid family protein; KEGG: dsa:Desal_1575 rhomboid family protein YP_004122089.1 TIGRFAM: pseudouridine synthase, RluA family; dephospho-CoA kinase; PFAM: pseudouridine synthase; Dephospho-CoA kinase; KEGG: dsa:Desal_1576 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_004122090.1 KEGG: dsa:Desal_1577 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004122091.1 KEGG: dsa:Desal_1578 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004122092.1 PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_2110 glycosyl transferase family protein YP_004122093.1 PFAM: MscS Mechanosensitive ion channel; KEGG: dsa:Desal_2217 MscS mechanosensitive ion channel YP_004122094.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: dsa:Desal_0987 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_004122095.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rpt:Rpal_4502 oxidoreductase domain protein YP_004122096.1 PFAM: transport-associated; KEGG: dal:Dalk_2148 transport-associated protein YP_004122097.1 PFAM: glycosyl transferase family 39; KEGG: dsa:Desal_2867 glycosyl transferase family 39 YP_004122098.1 KEGG: dsa:Desal_2866 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004122099.1 KEGG: dsa:Desal_2865 hypothetical protein YP_004122100.1 PFAM: protein of unknown function DUF115; KEGG: dsa:Desal_2863 protein of unknown function DUF115 YP_004122101.1 KEGG: dsa:Desal_2862 cysteine synthase; TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Cysteinyl-tRNA synthetase class Ia YP_004122102.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: dsa:Desal_1535 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_004122103.1 PFAM: transcriptional activator domain; KEGG: dsa:Desal_1534 hypothetical protein YP_004122104.1 KEGG: dsa:Desal_1533 indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_004122105.1 KEGG: dsa:Desal_1532 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YP_004122106.1 KEGG: dsa:Desal_1531 transcriptional regulator, NifA subfamily, fis family; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; SMART: GAF domain protein; AAA ATPase YP_004122107.1 PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_2395 glycosyl transferase, group 2 family protein YP_004122108.1 KEGG: dba:Dbac_1632 hypothetical protein YP_004122109.1 PFAM: glycosyl transferase family 2; KEGG: dsa:Desal_3364 glycosyl transferase family 2 YP_004122110.1 PFAM: glycosyl transferase family 2; KEGG: dsa:Desal_2796 glycosyl transferase family 2 YP_004122111.1 KEGG: dsa:Desal_1162 hypothetical protein YP_004122112.1 KEGG: dsa:Desal_1161 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004122113.1 KEGG: dvm:DvMF_0941 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122114.1 KEGG: dsa:Desal_1140 protein of unknown function DUF362 YP_004122115.1 KEGG: dvu:DVU3067 [NiFe] hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase YP_004122116.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: chy:CHY_2698 D-3-phosphoglycerate dehydrogenase YP_004122117.1 PFAM: aminotransferase class V; KEGG: dsa:Desal_1127 aminotransferase class V YP_004122118.1 KEGG: dsa:Desal_0735 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_004122119.1 KEGG: dsa:Desal_0734 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_004122120.1 KEGG: dba:Dbac_1421 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004122121.1 KEGG: dsa:Desal_3238 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004122122.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; nickel-dependent hydrogenase large subunit; KEGG: dsa:Desal_3237 NADH-ubiquinone oxidoreductase chain 49kDa YP_004122123.1 KEGG: dsa:Desal_3236 hypothetical protein YP_004122124.1 KEGG: dsa:Desal_3235 NADH dehydrogenase (quinone); PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004122125.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dsa:Desal_3234 respiratory-chain NADH dehydrogenase subunit 1 YP_004122126.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: dsa:Desal_3233 NADH/ubiquinone/plastoquinone (complex I) YP_004122127.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: dsa:Desal_0732 phosphoadenosine phosphosulfate reductase YP_004122128.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dvl:Dvul_1568 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_004122129.1 KEGG: dol:Dole_2561 hypothetical protein YP_004122130.1 KEGG: det:DET0166 ISDet2, transposase orfB; manually curated; PFAM: Integrase catalytic region YP_004122131.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvl:Dvul_2579 transposase IS3/IS911 family protein YP_004122132.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: glo:Glov_2979 D12 class N6 adenine-specific DNA methyltransferase YP_004122133.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: dvm:DvMF_3183 transcriptional regulator, TraR/DksA family YP_004122134.1 KEGG: isc:IscW_ISCW020231 hypothetical protein YP_004122135.1 KEGG: act:ACLA_088750 hypothetical protein YP_004122136.1 KEGG: mno:Mnod_2442 hypothetical protein YP_004122137.1 KEGG: dvu:DVU0219 tail protein, putative YP_004122138.1 PFAM: Baseplate J family protein; KEGG: pol:Bpro_3733 baseplate J-like protein YP_004122139.1 PFAM: GP46 family protein; KEGG: bpt:Bpet4426 putative bacteriophage protein GP46 YP_004122140.1 KEGG: pol:Bpro_3735 phage-related baseplate assembly protein V; TIGRFAM: phage baseplate assembly protein V; PFAM: Mu Gp45 domain protein YP_004122141.1 KEGG: pol:Bpro_3736 bacteriophage Mu P YP_004122142.1 PFAM: DNA circulation family protein; KEGG: pol:Bpro_3737 DNA circulation-like YP_004122143.1 PFAM: tail tape measure protein TP901 core region; KEGG: vvu:VV1_0088 hypothetical protein YP_004122145.1 PFAM: Mu-like prophage FluMu protein gp41; KEGG: ecs:ECs4981 hypothetical protein YP_004122146.1 PFAM: Tail tube protein, bacteriophage; KEGG: bpt:Bpet4419 phage tail tube protein YP_004122147.1 KEGG: pol:Bpro_3741 bacteriophage Mu tail sheath YP_004122148.1 KEGG: cro:ROD_25911 hypothetical protein YP_004122149.1 PFAM: Domain of unknown function DUF1834; KEGG: hde:HDEF_2208 hypothetical protein YP_004122150.1 TIGRFAM: phage virion morphogenesis protein; KEGG: hde:HDEF_2209 phage virion morphogenesis protein YP_004122151.1 PFAM: protein of unknown function DUF1320; KEGG: slt:Slit_0232 protein of unknown function DUF1320 YP_004122152.1 KEGG: sfu:Sfum_1883 hypothetical protein YP_004122153.1 KEGG: bvi:Bcep1808_1301 Mu-like prophage major head subunit gpT YP_004122154.1 KEGG: avi:Avi_3002 hypothetical protein YP_004122155.1 PFAM: Mu-like prophage I protein; KEGG: son:SO_2684 prophage MuSo2, protein GP32, putative YP_004122156.1 PFAM: head morphogenesis protein SPP1 gp7; KEGG: dvu:DVU2707 virion morphogenesis protein YP_004122157.1 PFAM: protein of unknown function DUF935; KEGG: btr:Btr_2627 phage protein YP_004122158.1 KEGG: bbr:BB3632 hypothetical protein YP_004122159.1 PFAM: Protein of unknown function DUF3486; KEGG: pol:Bpro_3781 phage-like protein YP_004122160.1 KEGG: bcj:BCAS0530 hypothetical protein YP_004122161.1 KEGG: mag:amb1759 hypothetical protein YP_004122162.1 KEGG: dvm:DvMF_0724 hypothetical protein YP_004122163.1 PFAM: Lytic transglycosylase catalytic; KEGG: dvu:DVU2699 transglycosylase SLT domain-containing protein YP_004122164.1 KEGG: bbr:BB3639 phage-related membrane protein YP_004122165.1 KEGG: jan:Jann_2894 hypothetical protein YP_004122166.1 KEGG: jan:Jann_2893 hypothetical protein YP_004122167.1 KEGG: rno:29726 solute carrier family 22 (organic cation/carnitine transporter), member 5 YP_004122168.1 KEGG: hdu:HD1540 hypothetical protein YP_004122169.1 KEGG: cvi:CV_2151 hypothetical protein YP_004122170.1 KEGG: gem:GM21_3701 hypothetical protein YP_004122171.1 KEGG: azc:AZC_0958 GCN5-related N-acetyltransferase YP_004122172.1 PFAM: regulatory protein IclR; KEGG: cro:ROD_09371 putative prophage DNA-binding protein YP_004122173.1 KEGG: mmi:MMAR_2117 fatty-acid-CoA ligase FadD9 YP_004122174.1 KEGG: pop:POPTR_793884 hypothetical protein YP_004122175.1 PFAM: Integrase catalytic region; KEGG: sgl:SG0823 hypothetical protein YP_004122176.1 KEGG: cvi:CV_2157 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: AAA ATPase YP_004122177.1 KEGG: mgl:MGL_1188 hypothetical protein YP_004122178.1 KEGG: dvu:DVU1136 host-nuclease inhibitor protein Gam, putative YP_004122179.1 KEGG: dma:DMR_24710 hypothetical protein YP_004122180.1 KEGG: rcu:RCOM_1542240 Pectinesterase-3 precursor, putative YP_004122181.1 KEGG: zma:100282188 plasminogen activator inhibitor 1 RNA-binding protein YP_004122182.1 KEGG: gct:GC56T3_1287 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004122183.1 KEGG: xau:Xaut_4518 hypothetical protein YP_004122184.1 KEGG: zma:100283056 LOC100283056 YP_004122185.1 KEGG: dvm:DvMF_0719 hypothetical protein YP_004122186.1 KEGG: bcj:BCAS0553 Mu GP16 GemA YP_004122187.1 PFAM: Mor transcription activator domain protein; KEGG: cro:ROD_09461 putative prophage transcriptional regulator YP_004122188.1 PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dsa:Desal_1126 FAD linked oxidase domain protein YP_004122189.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: dma:DMR_23810 putative sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein YP_004122190.1 PFAM: thioesterase superfamily protein; KEGG: mba:Mbar_A1645 phenylacetic acid degradation protein YP_004122191.1 KEGG: dsa:Desal_1125 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004122192.1 PFAM: aminodeoxychorismate lyase; KEGG: dsa:Desal_1124 aminodeoxychorismate lyase YP_004122193.1 KEGG: rba:RB5837 type-I signal peptidase; TIGRFAM: signal peptidase I; PFAM: Peptidase S26, conserved region YP_004122194.1 PFAM: glycosyl transferase family 2; KEGG: dsa:Desal_1103 glycosyl transferase family 2 YP_004122195.1 PFAM: PP-loop domain protein; KEGG: dde:Dde_3611 hypothetical protein YP_004122196.1 KEGG: dvu:DVU0136 hypothetical protein YP_004122197.1 KEGG: dsa:Desal_1106 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122198.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: dsa:Desal_1557 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_004122199.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004122200.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004122201.1 KEGG: nma:NMA0664 putative transposase for IS1016 YP_004122202.1 KEGG: dsa:Desal_1556 putative lipoprotein YP_004122203.1 KEGG: dsa:Desal_1555 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_004122204.1 KEGG: dsa:Desal_1554 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_004122205.1 KEGG: dma:DMR_22380 sec-independent protein translocase protein TatB; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004122206.1 KEGG: dsa:Desal_1552 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_004122207.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: dsa:Desal_1551 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_004122208.1 KEGG: dsa:Desal_1550 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122209.1 KEGG: dsa:Desal_1549 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122210.1 PFAM: inner-membrane translocator; KEGG: dap:Dacet_0894 inner-membrane translocator YP_004122211.1 PFAM: inner-membrane translocator; KEGG: dsa:Desal_1547 inner-membrane translocator YP_004122212.1 PFAM: Extracellular ligand-binding receptor; KEGG: dde:Dde_0612 high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein YP_004122213.1 SMART: Tetratricopeptide repeat; KEGG: dsa:Desal_1545 tetratricopeptide TPR_2 repeat protein YP_004122214.1 KEGG: dba:Dbac_2504 hypothetical protein YP_004122215.1 PFAM: cytochrome c assembly protein; KEGG: dsa:Desal_1543 cytochrome c assembly protein YP_004122216.1 PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: dsa:Desal_1542 cytochrome c-type biogenesis protein CcmB YP_004122217.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: dsa:Desal_1541 ABC transporter related; SMART: AAA ATPase YP_004122218.1 PFAM: cytochrome c assembly protein; KEGG: dsa:Desal_1540 cytochrome c assembly protein YP_004122219.1 PFAM: CcmE/CycJ protein; KEGG: dsa:Desal_1539 cytochrome c-type biogenesis protein CcmE YP_004122220.1 KEGG: dsa:Desal_1538 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein YP_004122221.1 PFAM: glycosyl transferase family 9; KEGG: dsa:Desal_1537 glycosyl transferase family 9 YP_004122222.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: dvl:Dvul_1214 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_004122223.1 PFAM: peptidase M50; KEGG: drt:Dret_0766 peptidase M50 YP_004122224.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: dsa:Desal_1108 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004122225.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dvl:Dvul_0677 peptidylprolyl isomerase, FKBP-type YP_004122226.1 PFAM: aminotransferase class I and II; KEGG: dsa:Desal_1097 aspartate aminotransferase YP_004122227.1 PFAM: VacJ family lipoprotein; KEGG: dsa:Desal_0971 VacJ family lipoprotein YP_004122228.1 KEGG: dsa:Desal_0972 hypothetical protein YP_004122229.1 TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; KEGG: dol:Dole_1541 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B YP_004122230.1 KEGG: dvm:DvMF_0574 hypothetical protein YP_004122231.1 PFAM: Late competence development protein ComFB; KEGG: dma:DMR_13030 hypothetical protein YP_004122232.1 PFAM: acriflavin resistance protein; KEGG: dsa:Desal_1096 acriflavin resistance protein YP_004122233.1 KEGG: dsa:Desal_1095 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004122234.1 KEGG: dsy:DSY3432 hypothetical protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004122235.1 PFAM: UvrD/REP helicase; PHP domain protein; KEGG: dsa:Desal_2966 UvrD/REP helicase YP_004122236.1 KEGG: dvl:Dvul_2482 hypothetical protein YP_004122237.1 KEGG: dvl:Dvul_2481 hypothetical protein YP_004122238.1 PFAM: cobalbumin biosynthesis protein; KEGG: dsa:Desal_2963 cobalbumin biosynthesis protein YP_004122239.1 PFAM: phosphoesterase RecJ domain protein; KEGG: dsa:Desal_2962 phosphoesterase RecJ domain protein YP_004122240.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; KEGG: dsa:Desal_2961 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2 YP_004122241.1 PFAM: protein of unknown function DUF81; KEGG: dde:Dde_1245 hypothetical protein YP_004122242.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: dvl:Dvul_0528 FMN-dependent alpha-hydroxy acid dehydrogenase YP_004122243.1 KEGG: dde:Dde_1244 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein YP_004122244.1 PFAM: Citrate transporter; KEGG: dat:HRM2_22850 SLC13A transporter family protein (TrkA domain protein) YP_004122245.1 PFAM: metallophosphoesterase; KEGG: bpt:Bpet3921 phosphohydrolases YP_004122246.1 KEGG: dsa:Desal_2954 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein YP_004122247.1 KEGG: dvl:Dvul_2681 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein YP_004122248.1 PFAM: cytochrome c552; KEGG: dba:Dbac_1942 hypothetical protein YP_004122249.1 KEGG: dsa:Desal_1382 hypothetical protein YP_004122250.1 KEGG: dsa:Desal_1381 deca-heme C-type cytochrome YP_004122251.1 KEGG: chl:Chy400_2454 beta-lactamase domain protein YP_004122252.1 PFAM: Protein of unknown function DUF2892; KEGG: aeh:Mlg_2741 hypothetical protein YP_004122253.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: dsa:Desal_3225 succinylglutamate desuccinylase/aspartoacylase YP_004122254.1 KEGG: dsa:Desal_3226 hypothetical protein YP_004122255.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: dde:Dde_3013 ErfK/YbiS/YcfS/YnhG family protein YP_004122256.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: dba:Dbac_3103 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004122257.1 KEGG: dsa:Desal_3228 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like YP_004122258.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: drt:Dret_2465 regulatory protein, FmdB family; SMART: Putative regulatory protein FmdB YP_004122259.1 KEGG: dvm:DvMF_1466 hypothetical protein YP_004122260.1 KEGG: dsa:Desal_3231 hypothetical protein YP_004122261.1 KEGG: cse:Cseg_1299 hypothetical protein YP_004122262.1 KEGG: pan:PODANSg6781 hypothetical protein YP_004122263.1 PFAM: acylphosphatase; KEGG: dsa:Desal_0646 acylphosphatase YP_004122264.1 KEGG: sfu:Sfum_3109 sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004122265.1 KEGG: sfu:Sfum_3111 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004122266.1 KEGG: dsa:Desal_3713 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver YP_004122267.1 PFAM: protein of unknown function DUF885; KEGG: sfu:Sfum_3972 hypothetical protein YP_004122268.1 SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; KEGG: dsa:Desal_1118 metal dependent phosphohydrolase YP_004122269.1 KEGG: dsa:Desal_1119 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122270.1 KEGG: dsa:Desal_1116 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004122271.1 KEGG: dsa:Desal_1117 extracellular ligand-binding receptor YP_004122272.1 KEGG: dma:DMR_02660 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver YP_004122273.1 KEGG: rce:RC1_3347 glucosamine--fructose-6-phosphate aminotransferase [isomerizing] , putative; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_004122274.1 PFAM: TnsA endonuclease; KEGG: asa:ASA_4341 transposon Tn7 transposition protein TnsA YP_004122275.1 PFAM: Integrase catalytic region; KEGG: ilo:IL2612 transposon Tn7 transposition protein TnsB YP_004122276.1 KEGG: asa:ASA_4339 transposon Tn7 transposition protein TnsC; PFAM: Tn7 transposition regulator TnsC; SMART: AAA ATPase YP_004122277.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004122278.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004122279.1 KEGG: asa:ASA_4335 transposon Tn7 transposition regulatory protein TnsE YP_004122280.1 manually curated; KEGG: psa:PST_0579 GMP synthase PP-ATPase subunit YP_004122281.1 KEGG: rme:Rmet_2828 hypothetical protein YP_004122282.1 PFAM: protein of unknown function DUF1703; KEGG: rme:Rmet_2832 hypothetical protein YP_004122283.1 KEGG: rme:Rmet_2831 hypothetical protein YP_004122284.1 KEGG: rme:Rmet_2830 hypothetical protein YP_004122285.1 PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_3362 transposase (class V) YP_004122286.1 PFAM: Integrase catalytic region; KEGG: dde:Dde_3361 transposase YP_004122287.1 PFAM: Integrase catalytic region; KEGG: dde:Dde_3361 transposase YP_004122288.1 PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_3362 transposase (class V) YP_004122289.1 KEGG: cya:CYA_2058 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004122290.1 KEGG: rsq:Rsph17025_4020 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like YP_004122291.1 KEGG: min:Minf_1261 phosphoribulokinase YP_004122292.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: dba:Dbac_1866 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_004122293.1 PFAM: PHP domain protein; KEGG: ttr:Tter_1562 PHP domain protein YP_004122294.1 KEGG: gme:Gmet_0055 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004122295.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: drt:Dret_1397 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YP_004122296.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: dma:DMR_38890 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004122297.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: alv:Alvin_0312 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II YP_004122298.1 PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; manually curated; KEGG: tgr:Tgr7_2890 pyruvate kinase; TIGRFAM: pyruvate kinase YP_004122299.1 KEGG: nhl:Nhal_3448 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004122300.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: tgr:Tgr7_2893 transketolase; SMART: Transketolase central region YP_004122301.1 KEGG: dma:DMR_13980 hypothetical protein YP_004122302.1 KEGG: cyn:Cyan7425_3043 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding YP_004122303.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004122304.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004122305.1 KEGG: det:DET0166 ISDet2, transposase orfB; manually curated; PFAM: Integrase catalytic region YP_004122306.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvl:Dvul_2579 transposase IS3/IS911 family protein YP_004122307.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: sat:SYN_00723 transposase YP_004122308.1 KEGG: dba:Dbac_1528 filamentous hemagglutinin family outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein YP_004122309.1 KEGG: dba:Dbac_1529 polypeptide-transport-associated domain protein ShlB-type; manually curated; PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein YP_004122310.1 KEGG: nma:NMA0664 putative transposase for IS1016 YP_004122311.1 KEGG: dvl:Dvul_2968 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein YP_004122312.1 PFAM: protein of unknown function DUF81; KEGG: dba:Dbac_1944 protein of unknown function DUF81 YP_004122313.1 PFAM: Protein of unknown function DUF2721; KEGG: drt:Dret_0522 hypothetical protein YP_004122314.1 KEGG: dsa:Desal_1069 hypothetical protein YP_004122315.1 KEGG: dsa:Desal_1068 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_004122316.1 KEGG: dvl:Dvul_1916 single-stranded nucleic acid binding R3H domain-containing protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: KH domain protein YP_004122317.1 KEGG: dsa:Desal_1066 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein YP_004122318.1 KEGG: dsa:Desal_1065 protein of unknown function DUF37; manually curated; PFAM: protein of unknown function DUF37 YP_004122319.1 manually curated; TIGRFAM: ribonuclease P protein component; KEGG: dsa:Desal_1064 ribonuclease P protein component; PFAM: ribonuclease P protein YP_004122320.1 KEGG: dsa:Desal_1063 ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_004122321.1 PFAM: protein of unknown function DUF162; KEGG: sfu:Sfum_0236 hypothetical protein YP_004122322.1 PFAM: ApbE family lipoprotein; KEGG: dsa:Desal_1061 hypothetical protein YP_004122323.1 KEGG: tra:Trad_1290 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004122324.1 PFAM: protein of unknown function DUF77; KEGG: dde:Dde_2417 hypothetical protein YP_004122325.1 PFAM: protein of unknown function UPF0153; KEGG: dma:DMR_06060 hypothetical protein YP_004122326.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: dsa:Desal_1915 hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004122327.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: dba:Dbac_0766 nickel-dependent hydrogenase large subunit YP_004122328.1 KEGG: dba:Dbac_0765 hydrogenase expression/formation protein; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_004122329.1 KEGG: dsa:Desal_1918 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_004122330.1 PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: dal:Dalk_5285 5'-nucleotidase domain protein YP_004122331.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ote:Oter_0338 oxidoreductase domain-containing protein YP_004122332.1 PFAM: protein of unknown function DUF1255; KEGG: lbf:LBF_5007 hypothetical protein YP_004122333.1 KEGG: dwi:Dwil_GK11966 GK11966 gene product from transcript GK11966-RA YP_004122334.1 KEGG: dsa:Desal_3325 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004122335.1 KEGG: swi:Swit_3126 GTP-binding protein EngA YP_004122336.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dal:Dalk_2481 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_004122337.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bid:Bind_1722 GDSL family lipase YP_004122338.1 KEGG: dsa:Desal_1078 aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004122339.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: dsa:Desal_3324 hypothetical protein YP_004122340.1 KEGG: ace:Acel_0815 hypothetical protein YP_004122341.1 PFAM: Pyruvoyl-dependent arginine decarboxylase; KEGG: sun:SUN_0883 phosphatidylserine decarboxylase YP_004122342.1 KEGG: xac:XAC0858 ABC transporter permease YP_004122343.1 SMART: phospholipid/glycerol acyltransferase; KEGG: dsa:Desal_1077 putative hemolysin YP_004122344.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: cbe:Cbei_0463 hemerythrin-like metal-binding protein YP_004122345.1 KEGG: dvm:DvMF_3063 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: chaperonin Cpn10 YP_004122346.1 KEGG: dsa:Desal_3024 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004122347.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pmy:Pmen_4448 antibiotic biosynthesis monooxygenase YP_004122348.1 KEGG: dsa:Desal_3214 hypothetical protein YP_004122349.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: sat:SYN_00140 aldehyde:ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase YP_004122350.1 PFAM: class II aldolase/adducin family protein; KEGG: sat:SYN_00141 ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_004122351.1 KEGG: dma:DMR_37370 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004122352.1 KEGG: dma:DMR_37380 putative arsenical-resistance protein ACR3; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_004122353.1 PFAM: Abortive infection protein; KEGG: nda:Ndas_4306 abortive infection protein YP_004122354.1 KEGG: bhy:BHWA1_00475 hypothetical protein YP_004122355.1 KEGG: dvm:DvMF_3199 hypothetical protein YP_004122356.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dsa:Desal_2887 ribosomal RNA methyltransferase RrmJ/FtsJ YP_004122357.1 PFAM: protein of unknown function DUF28; KEGG: dsa:Desal_2886 hypothetical protein YP_004122358.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: dsa:Desal_2885 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004122359.1 KEGG: dvm:DvMF_1511 hypothetical protein YP_004122360.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: dsa:Desal_2884 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004122361.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase RuvB domain; KEGG: dsa:Desal_2883 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_004122362.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dba:Dbac_2021 rubredoxin-type Fe(Cys)4 protein YP_004122363.1 PFAM: Transglycosylase-associated protein; KEGG: mmw:Mmwyl1_2924 transglycosylase-associated protein YP_004122364.1 SMART: beta-lactamase domain protein; KEGG: dvu:DVU2014 metallo-beta-lactamase family protein YP_004122365.1 KEGG: dsa:Desal_0304 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122366.1 KEGG: dsa:Desal_0305 molybdate ABC transporter, inner membrane subunit; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004122367.1 KEGG: dsa:Desal_0306 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004122368.1 PFAM: integrase family protein; TOBE domain-containing protein; KEGG: dsa:Desal_0307 TOBE domain protein YP_004122369.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: psl:Psta_3080 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_004122370.1 PFAM: protein of unknown function DUF389; KEGG: dak:DaAHT2_2330 hypothetical protein YP_004122371.1 TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; Hemerythrin HHE cation binding domain protein; PAS fold-3 domain protein; KEGG: abo:ABO_2666 GAF/PAS/GGDEF domain-containing protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004122372.1 KEGG: tpv:TP04_0352 hypothetical protein YP_004122373.1 KEGG: bac:BamMC406_6537 fis family transcriptional regulator YP_004122374.1 KEGG: dma:DMR_24030 putative site-specific recombinase YP_004122375.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tfu:Tfu_2103 putative membrane transferase YP_004122376.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dvl:Dvul_2710 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004122377.1 KEGG: dde:Dde_3717 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein YP_004122378.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; KEGG: dde:Dde_3715 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004122379.1 KEGG: dde:Dde_3714 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122380.1 KEGG: dvl:Dvul_2718 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122381.1 PFAM: UspA domain-containing protein; KEGG: dde:Dde_3712 universal stress protein YP_004122382.1 KEGG: dvm:DvMF_2553 hypothetical protein YP_004122383.1 PFAM: Cytochrome c, class III, conserved region; KEGG: dma:DMR_42490 cytochrome c3 YP_004122384.1 KEGG: dvm:DvMF_2555 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004122385.1 PFAM: Nitrate reductase gamma subunit; KEGG: dde:Dde_3708 hypothetical protein YP_004122386.1 KEGG: dvl:Dvul_2712 hypothetical protein YP_004122387.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dsa:Desal_0622 hypothetical protein YP_004122388.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; KEGG: dsa:Desal_0623 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein YP_004122389.1 KEGG: dvl:Dvul_0515 MarR family transcriptional regulator YP_004122390.1 KEGG: dal:Dalk_2637 hypothetical protein YP_004122391.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: dma:DMR_34250 fis family transcriptional regulator; SMART: AAA ATPase; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein YP_004122392.1 KEGG: dma:DMR_24280 hypothetical protein YP_004122393.1 KEGG: dsa:Desal_1164 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122394.1 PFAM: glycosyl transferase group 1; KEGG: ter:Tery_1356 glycosyl transferase, group 1 YP_004122395.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: azl:AZL_014350 peptidylprolyl isomerase YP_004122396.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dsa:Desal_2464 AMP-dependent synthetase and ligase YP_004122397.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; extracellular solute-binding protein family 3; response regulator receiver; KEGG: dma:DMR_34360 putative two-component hybrid sensor and regulator; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein YP_004122398.1 PFAM: branched-chain amino acid transport; KEGG: dba:Dbac_3054 branched-chain amino acid transport YP_004122399.1 PFAM: AzlC family protein; KEGG: dba:Dbac_3053 AzlC family protein YP_004122400.1 KEGG: dvm:DvMF_2175 transcriptional regulator, GntR family with aminotransferase domain; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004122401.1 KEGG: dvl:Dvul_0806 transporter DMT superfamily protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_004122402.1 KEGG: dba:Dbac_0377 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004122404.1 KEGG: dba:Dbac_0376 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein YP_004122405.1 KEGG: dba:Dbac_0375 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004122406.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: dma:DMR_27220 two-component hybrid sensor and regulator; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_004122407.1 KEGG: cak:Caul_0720 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004122408.1 KEGG: dma:DMR_42730 electron transfer flavoprotein beta-subunit domain protein; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_004122409.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dma:DMR_42720 hypothetical protein YP_004122410.1 KEGG: ote:Oter_3887 electron-transferring-flavoprotein dehydrogenase YP_004122411.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ote:Oter_3886 acyl-CoA dehydrogenase domain-containing protein YP_004122412.1 KEGG: dsa:Desal_0704 putative adenylate cyclase; PFAM: adenylate cyclase class-I; pentapeptide repeat protein YP_004122413.1 PFAM: ABC-3 protein; KEGG: dsa:Desal_1081 ABC-3 protein YP_004122414.1 KEGG: dsa:Desal_1080 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122415.1 PFAM: Rhomboid family protein; KEGG: gme:Gmet_2506 rhomboid-like protein YP_004122416.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dde:Dde_2559 beta-N-acetylhexosaminidase YP_004122417.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: smd:Smed_2878 protein of unknown function DUF306 MetA and HslJ YP_004122418.1 KEGG: dma:DMR_19490 tryptophan synthase subunit beta; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004122419.1 PFAM: Silent information regulator protein Sir2; KEGG: sfu:Sfum_3557 silent information regulator protein Sir2 YP_004122420.1 KEGG: dsa:Desal_1093 isocitrate dehydrogenase (NADP(+)); PFAM: isocitrate/isopropylmalate dehydrogenase YP_004122421.1 KEGG: dvm:DvMF_2639 hypothetical protein YP_004122422.1 PFAM: Glutamine synthetase type III-like; glutamine synthetase catalytic region; KEGG: dde:Dde_0102 glutamine synthetase, type III YP_004122423.1 PFAM: pseudouridine synthase; KEGG: dsa:Desal_3277 pseudouridine synthase YP_004122424.1 KEGG: dsa:Desal_3285 hypothetical protein YP_004122425.1 KEGG: drt:Dret_1444 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004122426.1 PFAM: basic membrane lipoprotein; KEGG: dba:Dbac_2105 basic membrane lipoprotein YP_004122427.1 KEGG: dba:Dbac_2106 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122428.1 PFAM: inner-membrane translocator; KEGG: dba:Dbac_2107 inner-membrane translocator YP_004122429.1 PFAM: inner-membrane translocator; KEGG: dba:Dbac_2108 inner-membrane translocator YP_004122430.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: dal:Dalk_2294 glyoxylate reductase YP_004122431.1 KEGG: dvm:DvMF_2801 hydroxypyruvate reductase; PFAM: MOFRL domain protein YP_004122432.1 KEGG: dsa:Desal_0964 D-Ala-D-Ala dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase YP_004122433.1 KEGG: hsl:OE2276F phosphotransferase domain-containing protein YP_004122434.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold domain protein; PAS fold-3 domain protein; KEGG: dsa:Desal_2093 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004122435.1 PFAM: protein of unknown function DUF204; KEGG: dvl:Dvul_0455 hypothetical protein YP_004122436.1 KEGG: dsa:Desal_2808 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122437.1 KEGG: dsa:Desal_2807 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; response regulator receiver; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region YP_004122438.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; KEGG: dsa:Desal_2809 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004122439.1 KEGG: dma:DMR_04070 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122440.1 KEGG: dsa:Desal_1331 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004122441.1 KEGG: dsa:Desal_1330 hypothetical protein YP_004122442.1 KEGG: xcv:XCV1598 LacI family transcription regulator YP_004122443.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsa:Desal_1329 GCN5-related N-acetyltransferase YP_004122444.1 KEGG: dsa:Desal_1328 hypothetical protein YP_004122445.1 KEGG: bbe:BBR47_55500 hypothetical protein YP_004122446.1 PFAM: acyltransferase 3; KEGG: dsa:Desal_1323 acyltransferase 3 YP_004122447.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: dsa:Desal_3144 protein of unknown function DUF161 YP_004122448.1 KEGG: dds:Ddes_0471 glycogen debranching enzyme; TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase YP_004122449.1 PFAM: glycosyl transferase group 1; Starch synthase catalytic domain-containing protein; KEGG: dds:Ddes_0470 glycosyl transferase group 1 YP_004122450.1 KEGG: lip:LI0331 alpha-amylase; PFAM: glycoside hydrolase family 57 YP_004122451.1 TIGRFAM: alpha-glucan phosphorylase; KEGG: sat:SYN_00879 glycogen synthase/glycogen phosphorylase; PFAM: glycogen synthase; glycosyl transferase family 35 YP_004122452.1 KEGG: dsa:Desal_1331 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004122453.1 KEGG: dvm:DvMF_1509 hypothetical protein YP_004122454.1 KEGG: dvm:DvMF_1508 hypothetical protein YP_004122455.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: dba:Dbac_1776 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_004122456.1 KEGG: dba:Dbac_1775 D-alanine--D-alanine ligase domain protein; PFAM: D-alanine--D-alanine ligase domain protein YP_004122457.1 PFAM: D-alanine--D-alanine ligase domain protein; KEGG: dba:Dbac_1774 protein of unknown function DUF201 YP_004122458.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dba:Dbac_1773 GCN5-related N-acetyltransferase YP_004122459.1 PFAM: histone deacetylase superfamily; KEGG: dba:Dbac_1145 histone deacetylase superfamily YP_004122460.1 PFAM: Phosphoglycerate mutase; KEGG: dma:DMR_44600 phosphoglycerate mutase family protein YP_004122462.1 KEGG: paa:Paes_1462 beta-phosphoglucomutase family hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; Haloacid dehalogenase domain protein hydrolase YP_004122463.1 KEGG: paa:Paes_1461 hypothetical protein YP_004122464.1 KEGG: gsu:GSU3318 hypothetical protein YP_004122465.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: dma:DMR_39840 putative response regulator; SMART: GGDEF domain containing protein; response regulator receiver YP_004122466.1 KEGG: dsa:Desal_3111 hypothetical protein YP_004122467.1 PFAM: Peptidase S24/S26A/S26B, conserved region; CI repressor; KEGG: dsa:Desal_3112 putative phage repressor YP_004122468.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: dsa:Desal_3114 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_004122469.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; manually curated; KEGG: dvu:DVU2468 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_004122470.1 PFAM: protein of unknown function UPF0005; KEGG: dsa:Desal_3116 protein of unknown function UPF0005 YP_004122471.1 KEGG: scl:sce1189 two-component histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein YP_004122472.1 PFAM: protein of unknown function DUF307; KEGG: dvl:Dvul_1392 hypothetical protein YP_004122473.1 KEGG: dsa:Desal_3119 Na+/Ca+ antiporter, CaCA family; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_004122474.1 KEGG: dma:DMR_43250 hypothetical protein YP_004122475.1 KEGG: dma:DMR_41660 hemerythrin family protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein YP_004122476.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: drt:Dret_0310 recombinase A; SMART: AAA ATPase YP_004122477.1 TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; KEGG: dsa:Desal_3122 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase SAD YP_004122478.1 KEGG: dsa:Desal_3123 ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004122479.1 PFAM: ribosomal protein S9; KEGG: dsa:Desal_3124 30S ribosomal protein S9 YP_004122480.1 manually curated; PFAM: Radical SAM domain protein; KEGG: dsa:Desal_3127 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004122481.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: dsa:Desal_0703 hypothetical protein YP_004122482.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dvl:Dvul_1936 cobalt transport protein CbiM YP_004122483.1 KEGG: dma:DMR_22260 hypothetical protein YP_004122484.1 KEGG: dma:DMR_38810 putative Rrf2 family DNA binding protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004122485.1 KEGG: dvm:DvMF_2247 channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_004122486.1 KEGG: pfo:Pfl01_0544 hypothetical protein YP_004122487.1 KEGG: dsa:Desal_3075 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein YP_004122489.1 PFAM: Uncharacterised protein family UPF0283; KEGG: dde:Dde_2862 hypothetical protein YP_004122490.1 PFAM: ATPase-like, ParA/MinD; KEGG: dsa:Desal_0620 cobyrinic acid ac-diamide synthase YP_004122491.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dsa:Desal_0622 hypothetical protein YP_004122492.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; KEGG: dsa:Desal_0623 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein YP_004122493.1 KEGG: dsa:Desal_0624 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_004122494.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: dsa:Desal_0625 hydrogenase expression/synthesis HypA YP_004122495.1 KEGG: dma:DMR_43400 two-component hybrid sensor and regulator; PFAM: CHASE4 domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004122496.1 KEGG: dsa:Desal_2097 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase YP_004122497.1 KEGG: afw:Anae109_3266 hypothetical protein YP_004122498.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vfi:VF_A0646 hypothetical protein YP_004122499.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_0865 binding-protein-dependent transport systems inner membrane component YP_004122500.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_0866 binding-protein-dependent transport systems inner membrane component YP_004122501.1 PFAM: polysaccharide deacetylase; KEGG: dma:DMR_19260 polysaccharide deacetylase domain protein YP_004122503.1 KEGG: dma:DMR_15300 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004122504.1 KEGG: dpo:Dpse_GA27143 GA27143 gene product from transcript GA27143-RA YP_004122505.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: dsa:Desal_3132 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004122506.1 KEGG: dma:DMR_07760 23S rRNA (uracil-5-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; deoxyribonuclease/rho motif-related TRAM YP_004122507.1 KEGG: dsa:Desal_3145 hypothetical protein YP_004122508.1 KEGG: dba:Dbac_1422 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004122509.1 PFAM: Protein of unknown function DUF3108; KEGG: dsa:Desal_2907 hypothetical protein YP_004122510.1 KEGG: dsa:Desal_0702 CBS domain containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004122511.1 KEGG: dsa:Desal_0701 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004122512.1 TIGRFAM: pyruvate kinase; KEGG: dvl:Dvul_0731 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004122513.1 PFAM: MraZ domain; KEGG: dsa:Desal_0700 MraZ protein YP_004122514.1 manually curated; TIGRFAM: S-adenosyl-methyltransferase MraW; KEGG: dsa:Desal_0699 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004122515.1 KEGG: dsa:Desal_0698 hypothetical protein YP_004122516.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: dsa:Desal_0697 peptidoglycan glycosyltransferase YP_004122517.1 KEGG: dsa:Desal_0696 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004122518.1 KEGG: dsa:Desal_0695 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004122519.1 KEGG: drt:Dret_0743 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004122520.1 KEGG: dba:Dbac_2608 UDP-N-acetylmuramoylalanine/D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004122521.1 KEGG: dsa:Desal_0692 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_004122522.1 KEGG: dsa:Desal_0691 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28 YP_004122523.1 KEGG: dsa:Desal_0690 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004122524.1 KEGG: dsa:Desal_0689 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_004122525.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: dsa:Desal_0688 polypeptide-transport-associated domain protein FtsQ-type YP_004122526.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: dsa:Desal_0687 cell division protein FtsA; SMART: cell division protein FtsA YP_004122527.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; KEGG: dsa:Desal_0686 cell division protein FtsZ; SMART: Tubulin/FtsZ, 2-layer sandwich domain YP_004122528.1 KEGG: dsa:Desal_0685 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004122529.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gme:Gmet_2565 transposase IS116/IS110/IS902 YP_004122530.1 KEGG: det:DET0166 ISDet2, transposase orfB; manually curated; PFAM: Integrase catalytic region YP_004122531.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvl:Dvul_2579 transposase IS3/IS911 family protein YP_004122532.1 PFAM: Gp37Gp68 family protein; KEGG: dak:DaAHT2_2601 Gp37Gp68 family protein YP_004122533.1 KEGG: rsd:TGRD_060 hypothetical protein YP_004122534.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gme:Gmet_2565 transposase IS116/IS110/IS902 YP_004122535.1 KEGG: dsa:Desal_0657 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004122536.1 KEGG: dsa:Desal_0658 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004122537.1 KEGG: dds:Ddes_1615 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_004122538.1 KEGG: dsa:Desal_0660 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004122539.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: drt:Dret_1414 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_004122540.1 KEGG: dsa:Desal_0662 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_004122541.1 KEGG: dsa:Desal_0663 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004122542.1 PFAM: protein of unknown function DUF177; KEGG: dsa:Desal_0664 protein of unknown function DUF177 YP_004122543.1 KEGG: dsa:Desal_0665 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004122544.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: dsa:Desal_1274 hypothetical protein YP_004122545.1 KEGG: dde:Dde_0715 hypothetical protein YP_004122546.1 KEGG: dde:Dde_0813 formate dehydrogenase subunit alpha; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region YP_004122547.1 KEGG: dma:DMR_24440 formate dehydrogenase beta subunit YP_004122548.1 KEGG: dsa:Desal_0671 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004122549.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: drt:Dret_1408 nitrogen-fixing NifU domain protein YP_004122550.1 SMART: beta-lactamase domain protein; KEGG: dsa:Desal_3000 beta-lactamase domain protein YP_004122551.1 KEGG: dsa:Desal_0677 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004122552.1 KEGG: dsa:Desal_0678 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004122553.1 KEGG: dde:Dde_0111 zinc resistance-associated protein YP_004122554.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dsa:Desal_0656 CMP/dCMP deaminase zinc-binding YP_004122555.1 KEGG: dsa:Desal_0655 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004122556.1 PFAM: Methyltransferase type 11; KEGG: cph:Cpha266_1157 methyltransferase type 11 YP_004122557.1 PFAM: regulatory protein TetR; KEGG: dol:Dole_1323 TetR family transcriptional regulator YP_004122558.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: dba:Dbac_0061 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004122559.1 KEGG: dvu:DVU1687 glycosyl transferase, group 2 family protein YP_004122560.1 KEGG: dsa:Desal_0653 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_004122561.1 KEGG: dsa:Desal_0652 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004122562.1 KEGG: dsa:Desal_0651 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_004122563.1 KEGG: dsa:Desal_0650 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004122564.1 PFAM: extracellular solute-binding protein family 1; KEGG: drt:Dret_0525 molybdate ABC transporter periplasmic substrate-binding protein YP_004122565.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 putative outer membrane autotransporter barrel; SMART: Autotransporter beta- domain protein YP_004122566.1 KEGG: dma:DMR_16790 hypothetical protein YP_004122567.1 KEGG: dsa:Desal_0649 hypothetical protein YP_004122568.1 PFAM: DNA polymerase III delta; KEGG: dsa:Desal_0648 DNA polymerase III delta YP_004122569.1 KEGG: dsa:Desal_0647 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004122570.1 PFAM: acylphosphatase; KEGG: adg:Adeg_1796 acylphosphatase YP_004122571.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: dsa:Desal_0645 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_004122572.1 SMART: Tetratricopeptide repeat; KEGG: lip:LI0312 TPR repeat-containing protein YP_004122573.1 KEGG: dsa:Desal_0800 TPR repeat-containing protein YP_004122574.1 KEGG: ecb:100053548 similar to cytochrome c oxidase subunit IV YP_004122575.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dvl:Dvul_2082 TPR repeat-containing protein YP_004122576.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dsa:Desal_0643 regulatory protein, FmdB family; SMART: Putative regulatory protein FmdB YP_004122577.1 TIGRFAM: porphobilinogen deaminase; KEGG: dsa:Desal_0642 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_004122578.1 KEGG: dsa:Desal_0641 hypothetical protein YP_004122579.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: dsa:Desal_0639 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_004122580.1 KEGG: dvu:DVU2899 hypothetical protein YP_004122581.1 KEGG: dvm:DvMF_0206 hypothetical protein YP_004122582.1 KEGG: ure:UREG_01393 hypothetical protein YP_004122583.1 KEGG: dsa:Desal_0637 hypothetical protein YP_004122584.1 PFAM: shikimate kinase; KEGG: dsa:Desal_0636 shikimate kinase YP_004122585.1 KEGG: dsa:Desal_0635 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004122586.1 Contains selenocysteine; manually curated; KEGG: dvm:DvMF_0158 HesB-like domain-containing protein; PFAM: HesB/YadR/YfhF-family protein YP_004122587.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: dvm:DvMF_0158 HesB-like domain-containing protein YP_004122588.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dba:Dbac_2287 phenylacetate-coenzyme A ligase, putative YP_004122589.1 KEGG: dma:DMR_09040 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122590.1 KEGG: ter:Tery_4433 hypothetical protein YP_004122591.1 PFAM: Extracellular ligand-binding receptor; KEGG: dma:DMR_09050 ABC transporter substrate binding protein precursor YP_004122592.1 PFAM: inner-membrane translocator; KEGG: dba:Dbac_2284 inner-membrane translocator YP_004122593.1 PFAM: inner-membrane translocator; KEGG: dma:DMR_09070 ABC transporter permease protein YP_004122594.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dma:DMR_09080 putative fatty-acid--CoA ligase YP_004122595.1 KEGG: dma:DMR_09090 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122596.1 KEGG: dsa:Desal_0626 CBS domain containing protein; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein YP_004122597.1 KEGG: dat:HRM2_37940 hypothetical protein YP_004122598.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rhi:NGR_b00250 cytidine/deoxycytidylate deaminase family protein YP_004122599.1 KEGG: dat:HRM2_37910 HisC3; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004122600.1 KEGG: dat:HRM2_37900 hypothetical protein YP_004122601.1 PFAM: SMC domain protein; KEGG: dvm:DvMF_0923 SMC domain protein YP_004122602.1 PFAM: extracellular solute-binding protein family 3; KEGG: dvl:Dvul_1683 hypothetical protein YP_004122603.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: dba:Dbac_2947 multiple antibiotic resistance (MarC)-related protein YP_004122604.1 PFAM: extracellular solute-binding protein family 3; KEGG: asa:ASA_2337 ABC-type transporter, periplasmic binding protein YP_004122605.1 PFAM: acyl-ACP thioesterase; KEGG: srm:SRM_00055 acyl-ACP thioesterase YP_004122606.1 PFAM: extracellular solute-binding protein family 3; KEGG: tkm:TK90_1750 diguanylate cyclase with PAS/PAC and GAF sensors YP_004122607.1 KEGG: dvm:DvMF_0966 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004122608.1 KEGG: dsa:Desal_1233 hypothetical protein YP_004122609.1 SMART: Tetratricopeptide repeat; KEGG: dsa:Desal_1232 tetratricopeptide TPR_2 repeat protein YP_004122610.1 KEGG: dba:Dbac_1534 hypothetical protein YP_004122611.1 PFAM: glycoside hydrolase family 13 domain protein; KEGG: sfu:Sfum_3886 glycoside hydrolase family 13 protein YP_004122612.1 KEGG: sfu:Sfum_3887 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004122613.1 PFAM: nitroreductase; KEGG: dsa:Desal_0860 nitroreductase YP_004122614.1 SMART: beta-lactamase domain protein; KEGG: dvl:Dvul_0544 beta-lactamase domain-containing protein YP_004122615.1 PFAM: NADPH-dependent FMN reductase; KEGG: dsa:Desal_0858 NADPH-dependent FMN reductase YP_004122616.1 PFAM: phosphoribosyltransferase; KEGG: dma:DMR_11140 competence protein F YP_004122617.1 KEGG: dsa:Desal_0854 ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_004122618.1 KEGG: dma:DMR_39710 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_004122619.1 KEGG: dsa:Desal_0852 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_004122620.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: dsa:Desal_0851 gamma-glutamyl kinase; SMART: PUA domain containing protein YP_004122621.1 PFAM: major facilitator superfamily MFS_1; KEGG: dsa:Desal_0845 major facilitator superfamily MFS_1 YP_004122622.1 KEGG: dba:Dbac_0168 protein of unknown function DUF1566 YP_004122623.1 KEGG: dde:Dde_3498 hypothetical protein YP_004122624.1 TIGRFAM: acetylglutamate kinase; KEGG: dsa:Desal_0839 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004122625.1 KEGG: dma:DMR_41660 hemerythrin family protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein YP_004122626.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: dsa:Desal_0837 molybdenum cofactor synthesis domain protein; SMART: molybdopterin binding domain YP_004122627.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: dsa:Desal_3074 hypothetical protein YP_004122628.1 TIGRFAM: adenosylhomocysteinase; KEGG: dsa:Desal_3077 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_004122629.1 KEGG: dsa:Desal_3078 transcriptional regulator, ArsR family; PFAM: Methyltransferase type 11; regulatory protein ArsR; SMART: regulatory protein ArsR YP_004122630.1 KEGG: dba:Dbac_0976 anti-sigma-factor antagonist; PFAM: response regulator receiver; Sulfate transporter/antisigma-factor antagonist STAS; SMART: response regulator receiver YP_004122631.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dba:Dbac_0977 redoxin domain protein YP_004122632.1 KEGG: dba:Dbac_0978 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; GAF domain protein YP_004122633.1 PFAM: methylamine utilisation MauE; KEGG: dba:Dbac_0979 DoxX family protein YP_004122634.1 KEGG: dba:Dbac_0980 hypothetical protein YP_004122635.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: dma:DMR_27250 sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004122636.1 KEGG: bbo:BBOV_II004120 variant erythrocyte surface antigen-1, alpha subunit YP_004122637.1 PFAM: FG-GAP repeat protein; Hemolysin-type calcium-binding region; KEGG: ter:Tery_0591 FG-GAP YP_004122638.1 PFAM: regulatory protein TetR; KEGG: dsa:Desal_2694 transcriptional regulator, TetR family YP_004122639.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: dde:Dde_2216 extracellular solute-binding protein YP_004122640.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: dsa:Desal_2695 TRAP dicarboxylate transporter-DctP subunit YP_004122641.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dsa:Desal_2696 TRAP-type C4-dicarboxylate transport system, small permease component YP_004122642.1 KEGG: dde:Dde_2214 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004122643.1 TIGRFAM: alanine dehydrogenase; KEGG: dsa:Desal_3402 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_004122644.1 KEGG: dat:HRM2_12010 HTH-type transcriptional regulator (Lrp-AsnC family protein); PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004122645.1 KEGG: dsa:Desal_0035 17 kDa surface antigen YP_004122646.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; KEGG: dma:DMR_33730 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein YP_004122647.1 KEGG: dde:Dde_2366 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004122648.1 PFAM: Type II secretion system F domain; KEGG: dvm:DvMF_2736 type II secretion system protein YP_004122649.1 PFAM: Type II secretion system F domain; KEGG: dvm:DvMF_2737 type II secretion system protein YP_004122650.1 PFAM: type II secretion system protein E; KEGG: dma:DMR_33820 type II/IV secretion system protein family protein YP_004122651.1 KEGG: dvl:Dvul_1110 response regulator receiver protein YP_004122652.1 KEGG: vap:Vapar_1520 pilus-associated lipoprotein YP_004122653.1 PFAM: type II and III secretion system protein; KEGG: dde:Dde_2360 type II/III secretion system protein YP_004122654.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: dde:Dde_2359 putative pilus assembly protein CpaB; SMART: SAF domain protein YP_004122655.1 PFAM: peptidase A24A prepilin type IV; KEGG: dvl:Dvul_1114 peptidase A24A, prepilin type IV YP_004122656.1 PFAM: Flp/Fap pilin component; KEGG: nar:Saro_1905 Flp/Fap pilin component YP_004122657.1 KEGG: dma:DMR_33870 putative NtrC family two-component response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004122658.1 PFAM: TadE family protein; KEGG: dde:Dde_2367 hypothetical protein YP_004122659.1 KEGG: dde:Dde_2368 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_004122660.1 PFAM: TadE family protein; KEGG: dvl:Dvul_1103 TadE family protein YP_004122661.1 KEGG: dde:Dde_1667 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004122662.1 KEGG: dat:HRM2_12250 ABC-type histidine transport system, periplasmic histidine-binding protein (HBP) precursor; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004122663.1 PFAM: nitroreductase; KEGG: drm:Dred_1649 nitroreductase YP_004122664.1 KEGG: dvm:DvMF_1485 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_004122665.1 PFAM: TrkA-C domain protein; KEGG: dau:Daud_0860 TrkA domain-containing protein YP_004122666.1 PFAM: sodium/hydrogen exchanger; KEGG: dau:Daud_0861 sodium/hydrogen exchanger YP_004122667.1 PFAM: TrkA-C domain protein; TrkA-N domain protein; Ion transport 2 domain protein; KEGG: dvm:DvMF_1148 TrkA-N domain protein YP_004122668.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: dsa:Desal_3587 ferredoxin-dependent glutamate synthase YP_004122669.1 KEGG: dat:HRM2_37940 hypothetical protein YP_004122670.1 KEGG: nma:NMA0664 putative transposase for IS1016 YP_004122671.1 PFAM: NADPH-dependent FMN reductase; KEGG: sat:SYN_02131 iron-sulfur flavoprotein YP_004122672.1 PFAM: extracellular solute-binding protein family 1; KEGG: bbe:BBR47_27950 hypothetical protein YP_004122673.1 PFAM: restriction endonuclease; KEGG: cyt:cce_2417 mrr restriction system protein YP_004122674.1 KEGG: etr:ETAE_1603 hypothetical protein YP_004122675.1 PFAM: Fmu (Sun) domain protein; KEGG: dsa:Desal_3249 Fmu (Sun) domain protein YP_004122676.1 KEGG: dba:Dbac_0311 hypothetical protein YP_004122677.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: dsa:Desal_3247 TRAP dicarboxylate transporter-DctP subunit YP_004122678.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dsa:Desal_3246 tripartite ATP-independent periplasmic transporters, DctQ component, putative YP_004122679.1 KEGG: dsa:Desal_3245 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004122680.1 PFAM: Dicarboxylate transport; KEGG: dol:Dole_2384 hypothetical protein YP_004122681.1 KEGG: dat:HRM2_23170 hypothetical protein YP_004122682.1 PFAM: Uncharacterised conserved protein UCP025560; KEGG: dba:Dbac_2331 hypothetical protein YP_004122683.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: dsa:Desal_3244 pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_004122684.1 PFAM: transport-associated; KEGG: dde:Dde_2000 transport-associated protein YP_004122685.1 PFAM: NLP/P60 protein; KEGG: dsa:Desal_3232 NLP/P60 protein YP_004122686.1 KEGG: dsa:Desal_0769 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004122687.1 KEGG: glo:Glov_2928 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SMART: chaperonin Cpn10 YP_004122688.1 KEGG: dde:Dde_2060 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_004122689.1 KEGG: dsa:Desal_3579 hypothetical protein YP_004122690.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: sbn:Sbal195_4348 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); SMART: GGDEF domain containing protein; PAS domain containing protein YP_004122691.1 KEGG: dma:DMR_34020 hypothetical protein YP_004122692.1 KEGG: cak:Caul_0720 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004122693.1 PFAM: protein of unknown function UPF0227; KEGG: ilo:IL0687 alpha/beta fold family hydrolase YP_004122694.1 KEGG: svo:SVI_0385 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004122695.1 KEGG: dal:Dalk_5027 NMT1/THI5 like domain protein YP_004122696.1 KEGG: dps:DP1407 serine/threonine phosphatase family protein; PFAM: Stage II sporulation protein E; Cache domain protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein YP_004122697.1 KEGG: dvl:Dvul_1178 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_004122698.1 KEGG: dae:Dtox_0933 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_004122699.1 KEGG: dsa:Desal_2475 hypothetical protein YP_004122700.1 PFAM: ketose-bisphosphate aldolase class-II; KEGG: dal:Dalk_5159 ketose-bisphosphate aldolase class-II YP_004122701.1 KEGG: dsa:Desal_0585 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004122702.1 PFAM: regulatory protein TetR; KEGG: dsa:Desal_0128 transcriptional regulator, TetR family YP_004122704.1 KEGG: dvm:DvMF_2842 hypothetical protein YP_004122705.1 KEGG: rce:RC1_3275 TPR domain protein, putative YP_004122706.1 KEGG: dsa:Desal_2098 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer YP_004122707.1 KEGG: aba:Acid345_0094 parallel beta-helix repeat-containing protein YP_004122708.1 KEGG: dde:Dde_0283 hypothetical protein YP_004122709.1 KEGG: dsa:Desal_0745 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: response regulator receiver; CheW domain protein YP_004122710.1 PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: dvm:DvMF_1832 N-acylneuraminate-9-phosphate synthase; SMART: SAF domain protein YP_004122711.1 PFAM: regulatory protein IclR; KEGG: dvm:DvMF_1831 transcriptional regulator, MarR family YP_004122712.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dsa:Desal_0743 AMP-dependent synthetase and ligase YP_004122713.1 PFAM: Extracellular ligand-binding receptor; KEGG: dsa:Desal_2943 extracellular ligand-binding receptor YP_004122714.1 PFAM: inner-membrane translocator; KEGG: dsa:Desal_2944 inner-membrane translocator YP_004122715.1 PFAM: inner-membrane translocator; KEGG: dsa:Desal_2945 inner-membrane translocator YP_004122716.1 KEGG: dvl:Dvul_0565 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122717.1 KEGG: dsa:Desal_2947 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122718.1 KEGG: dvl:Dvul_1291 peptidyl-prolyl cis-trans isomerase, cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004122719.1 KEGG: ath:AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein YP_004122720.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dsa:Desal_3625 DegT/DnrJ/EryC1/StrS aminotransferase YP_004122721.1 PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: dsa:Desal_3646 hypothetical protein YP_004122722.1 KEGG: dma:DMR_03630 putative Dsr related protein; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004122723.1 PFAM: Dissimilatory sulfite reductase D; KEGG: dsa:Desal_0789 dissimilatory sulfite reductase D YP_004122724.1 TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: dsa:Desal_0788 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004122725.1 TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: dsa:Desal_0787 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region YP_004122726.1 PFAM: protein of unknown function UPF0153; KEGG: dsa:Desal_0786 protein of unknown function UPF0153 YP_004122727.1 KEGG: dsa:Desal_0785 hypothetical protein YP_004122728.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; KEGG: dsa:Desal_3567 putative deoxyribonucleotide triphosphate pyrophosphatase; PFAM: Ham1 family protein YP_004122729.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: dvu:DVU3152 sensory box histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein YP_004122730.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; protein of unknown function UPF0004; KEGG: dsa:Desal_3569 MiaB-like tRNA modifying enzyme YliG; SMART: Elongator protein 3/MiaB/NifB YP_004122731.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gme:Gmet_2565 transposase IS116/IS110/IS902 YP_004122732.1 TIGRFAM: seryl-tRNA synthetase; KEGG: dsa:Desal_3376 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004122733.1 KEGG: sbi:SORBI_09g003710 hypothetical protein YP_004122734.1 KEGG: aeh:Mlg_0579 17 kDa surface antigen YP_004122735.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: dsa:Desal_0725 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) YP_004122736.1 KEGG: dat:HRM2_26700 putative TRAP-type transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004122737.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: dat:HRM2_26710 putative TRAP-type transporter, periplasmic component (TAXI family protein) YP_004122738.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dsa:Desal_0271 RNA methyltransferase, TrmH family, group 1 YP_004122739.1 KEGG: dvu:DVU0071 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein YP_004122740.1 KEGG: dsa:Desal_0242 hypothetical protein YP_004122741.1 KEGG: dsa:Desal_0243 hypothetical protein YP_004122742.1 KEGG: dsa:Desal_0244 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein YP_004122743.1 PFAM: MgtE intracellular region; KEGG: dvm:DvMF_1394 hypothetical protein YP_004122744.1 KEGG: dsa:Desal_0246 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004122745.1 KEGG: dsa:Desal_0967 LPXTG-motif cell wall anchor domain protein YP_004122746.1 PFAM: Cache type 2 domain protein; KEGG: rsl:RPSI07_3358 putative sensor histidine kinase YP_004122747.1 PFAM: Cache type 2 domain protein; KEGG: rsl:RPSI07_3358 putative sensor histidine kinase YP_004122748.1 PFAM: protein of unknown function UPF0047; KEGG: dde:Dde_3175 hypothetical protein YP_004122749.1 TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: dvm:DvMF_1177 precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004122750.1 KEGG: dba:Dbac_0141 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004122751.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: dsa:Desal_0265 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Conserved hypothetical protein CHP00095 YP_004122752.1 KEGG: dsa:Desal_3009 putative translaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004122753.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; KEGG: dsa:Desal_0276 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_004122755.1 KEGG: dsa:Desal_0593 HI0933 family protein; manually curated; PFAM: HI0933 family protein YP_004122756.1 TIGRFAM: cytidylate kinase; KEGG: dsa:Desal_0177 cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase YP_004122757.1 KEGG: dsa:Desal_0178 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004122758.1 PFAM: UspA domain-containing protein; KEGG: dsa:Desal_0180 UspA domain protein YP_004122759.1 KEGG: dsa:Desal_0181 hypothetical protein YP_004122760.1 KEGG: dsa:Desal_0239 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122761.1 PFAM: inner-membrane translocator; KEGG: dma:DMR_45580 branched-chain amino acid ABC transporter permease protein YP_004122762.1 PFAM: inner-membrane translocator; KEGG: dsa:Desal_0237 inner-membrane translocator YP_004122763.1 PFAM: Extracellular ligand-binding receptor; KEGG: dsa:Desal_0236 extracellular ligand-binding receptor YP_004122764.1 KEGG: dsa:Desal_0235 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004122765.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dal:Dalk_1721 glycine betaine transporter periplasmic subunit YP_004122766.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1720 binding-protein-dependent transport systems inner membrane component YP_004122767.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: dal:Dalk_1719 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004122768.1 KEGG: dsa:Desal_0234 hypothetical protein YP_004122769.1 KEGG: dsa:Desal_0233 heterodisulfide reductase, transmembrane subunit, putative YP_004122770.1 PFAM: methyl-viologen-reducing hydrogenase delta subunit; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dma:DMR_05420 quinone-interacting membrane-bound oxidoreductase complex subunit B YP_004122771.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dba:Dbac_3199 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004122772.1 TIGRFAM: adenylylsulfate reductase, alpha subunit; KEGG: dsa:Desal_0230 adenylylsulfate reductase subunit alpha YP_004122773.1 TIGRFAM: adenylylsulfate reductase, beta subunit; KEGG: dsa:Desal_0229 adenylylsulfate reductase, beta subunit YP_004122774.1 TIGRFAM: sulfate adenylyltransferase; KEGG: dde:Dde_2265 sulfate adenylyltransferase; PFAM: ATP-sulfurylase YP_004122775.1 PFAM: Chorismate mutase, type II; EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: dsa:Desal_0227 5-enolpyruvylshikimate-3-phosphate synthase-like protein YP_004122776.1 KEGG: dsa:Desal_0226 hypothetical protein YP_004122777.1 KEGG: dma:DMR_39020 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain-containing protein YP_004122778.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: dsa:Desal_0224 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004122779.1 KEGG: dsa:Desal_3353 CgeB family protein YP_004122780.1 PFAM: glycosyl transferase family 9; KEGG: dsa:Desal_3008 glycosyl transferase family 9 YP_004122781.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: dsa:Desal_3007 flagellar hook-length control protein YP_004122782.1 PFAM: flagellar hook capping protein; KEGG: dsa:Desal_3006 flagellar hook capping protein YP_004122783.1 KEGG: dsa:Desal_3005 protein of unknown function DUF1078 domain protein; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein YP_004122784.1 PFAM: flagellin domain protein; KEGG: dsa:Desal_3004 flagellin domain protein YP_004122785.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: dsa:Desal_3003 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_004122786.1 KEGG: dma:DMR_20040 CoA-binding domain protein; PFAM: CoA-binding domain protein; SMART: CoA-binding domain protein YP_004122787.1 PFAM: DRTGG domain protein; KEGG: dsa:Desal_3001 DRTGG domain protein YP_004122788.1 KEGG: dsa:Desal_3476 hypothetical protein YP_004122789.1 PFAM: peptidase M48 Ste24p; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: dsa:Desal_0913 peptidase M48 Ste24p YP_004122790.1 PFAM: glutamine amidotransferase class-I; KEGG: dap:Dacet_2818 glutamine amidotransferase class-I YP_004122791.1 KEGG: dsa:Desal_3389 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_004122792.1 KEGG: dsa:Desal_3390 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_004122793.1 KEGG: dsa:Desal_3391 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_004122794.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: dsa:Desal_3392 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004122795.1 KEGG: dma:DMR_00360 hypothetical protein YP_004122796.1 KEGG: dvm:DvMF_1833 hypothetical protein YP_004122797.1 KEGG: sat:SYN_00227 putative cytoplasmic protein; PFAM: Hpt domain protein; SMART: Hpt domain protein YP_004122798.1 TIGRFAM: alpha-acetolactate decarboxylase; KEGG: dsa:Desal_3418 alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase YP_004122799.1 PFAM: CheD family protein; KEGG: dsa:Desal_3417 CheD, stimulates methylation of MCP protein YP_004122800.1 PFAM: major facilitator superfamily MFS_1; KEGG: dsa:Desal_3413 major facilitator superfamily MFS_1 YP_004122801.1 PFAM: protein of unknown function DUF523; KEGG: dvl:Dvul_2924 hypothetical protein YP_004122802.1 PFAM: protein of unknown function DUF45; KEGG: dsa:Desal_3414 protein of unknown function DUF45 YP_004122803.1 PFAM: Methyltransferase type 11; KEGG: dol:Dole_1540 methyltransferase type 11 YP_004122804.1 KEGG: dma:DMR_11770 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004122805.1 KEGG: pph:Ppha_1645 hypothetical protein YP_004122806.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: dsa:Desal_3420 excinuclease ABC, A subunit; SMART: AAA ATPase YP_004122807.1 KEGG: dsa:Desal_3695 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004122808.1 KEGG: dsa:Desal_3704 hypothetical protein YP_004122809.1 KEGG: drt:Dret_0280 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004122810.1 KEGG: azl:AZL_014290 outer membrane autotransporter barrel precursor YP_004122811.1 KEGG: dsa:Desal_3796 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_004122812.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: drt:Dret_2245 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain YP_004122813.1 KEGG: dvu:DVU0144 cytidyltransferase-like protein; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_004122814.1 PFAM: protein of unknown function UPF0153; KEGG: dvm:DvMF_2337 protein of unknown function UPF0153 YP_004122815.1 KEGG: dma:DMR_20900 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004122816.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; KEGG: dma:DMR_41710 two-component hybrid sensor and regulator; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004122817.1 KEGG: dsa:Desal_0190 hypothetical protein YP_004122818.1 PFAM: thioesterase superfamily protein; KEGG: dsa:Desal_0189 thioesterase superfamily protein YP_004122819.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dvm:DvMF_1805 glyoxalase/bleomycin resistance protein/dioxygenase YP_004122820.1 KEGG: dma:DMR_04450 hypothetical protein; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_004122821.1 KEGG: sfu:Sfum_4077 sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_004122822.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dma:DMR_18890 hypothetical membrane protein YP_004122823.1 KEGG: dsa:Desal_3387 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004122824.1 KEGG: dsa:Desal_3387 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: response regulator receiver; Tetratricopeptide repeat YP_004122825.1 KEGG: dma:DMR_15700 methionine biosynthesis MetW family protein; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein YP_004122826.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: dma:DMR_15680 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_004122827.1 KEGG: ank:AnaeK_0470 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004122828.1 PFAM: GCN5-related N-acetyltransferase; KEGG: syn:sll1469 hypothetical protein YP_004122829.1 KEGG: dvl:Dvul_2015 4-hydroxybenzoate polyprenyltransferase, putative; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase YP_004122830.1 PFAM: protein of unknown function DUF606; KEGG: dsa:Desal_3446 protein of unknown function DUF606 YP_004122831.1 KEGG: dsa:Desal_1072 transcriptional regulator, TraR/DksA family YP_004122832.1 PFAM: glycosyl transferase group 1; KEGG: dsa:Desal_0766 glycosyl transferase group 1 YP_004122833.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gme:Gmet_2565 transposase IS116/IS110/IS902 YP_004122834.1 KEGG: dde:Dde_0113 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_004122835.1 KEGG: rpi:Rpic_3189 hypothetical protein YP_004122836.1 TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dma:DMR_02510 putative sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; extracellular solute-binding protein family 3 YP_004122837.1 PFAM: Methyltransferase type 11; KEGG: dvl:Dvul_1584 methyltransferase type 11 YP_004122838.1 PFAM: aminotransferase class I and II; KEGG: dsa:Desal_3772 aminotransferase class I and II YP_004122839.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: dsa:Desal_3447 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_004122840.1 KEGG: dma:DMR_04890 hypothetical protein YP_004122841.1 PFAM: MCP methyltransferase CheR-type; KEGG: dsa:Desal_1824 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_004122842.1 TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: dsa:Desal_3449 phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_004122843.1 PFAM: protein of unknown function DUF710; KEGG: dsa:Desal_3450 hypothetical protein YP_004122844.1 KEGG: dsa:Desal_3451 hypothetical protein YP_004122845.1 KEGG: dsa:Desal_3452 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase YP_004122846.1 KEGG: dsa:Desal_3453 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_004122847.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: dde:Dde_0985 F0F1 ATP synthase subunit beta; SMART: AAA ATPase YP_004122848.1 KEGG: dsa:Desal_3455 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_004122849.1 KEGG: dsa:Desal_3456 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_004122850.1 KEGG: dsa:Desal_3457 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_004122851.1 KEGG: dvl:Dvul_2191 H+-transporting two-sector ATPase, B/B' subunit; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_004122852.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dsa:Desal_3459 H+transporting two-sector ATPase B/B' subunit YP_004122853.1 PFAM: protein of unknown function DUF583; KEGG: dsa:Desal_3460 protein of unknown function DUF583 YP_004122854.1 KEGG: dsa:Desal_3461 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_004122855.1 TIGRFAM: penicillin-binding protein 2; KEGG: dsa:Desal_3462 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004122856.1 KEGG: dma:DMR_04720 hypothetical protein YP_004122857.1 KEGG: dsa:Desal_3464 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_004122858.1 KEGG: dsa:Desal_3465 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004122859.1 TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: drt:Dret_2223 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_004122860.1 KEGG: dvl:Dvul_2182 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_004122861.1 KEGG: dsa:Desal_3723 redox-sensing transcriptional repressor REX; PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; SMART: CoA-binding domain protein YP_004122862.1 KEGG: dsa:Desal_3724 ATP synthase F0, C subunit; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_004122863.1 KEGG: dvm:DvMF_1388 ATP synthase F0, A subunit; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_004122864.1 PFAM: ATP synthase I chain; KEGG: dsa:Desal_3726 ATP synthase I YP_004122865.1 KEGG: drt:Dret_2089 ATP synthase protein I YP_004122866.1 KEGG: dsa:Desal_3657 MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like protein; PFAM: Protein of unknown function DUF3426 YP_004122867.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: dsa:Desal_3658 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004122868.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dde:Dde_2113 acetyltransferase YP_004122869.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dsa:Desal_3660 redoxin domain protein YP_004122870.1 PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: dsa:Desal_3661 homocysteine S-methyltransferase YP_004122871.1 KEGG: dsa:Desal_3662 putative RNA polymerase, sigma 70 family subunit; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein YP_004122872.1 KEGG: dsa:Desal_3664 tetratricopeptide TPR_2 repeat protein YP_004122873.1 KEGG: dsa:Desal_3665 hypothetical protein YP_004122874.1 KEGG: dsa:Desal_3666 hypothetical protein YP_004122875.1 KEGG: drt:Dret_0852 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_004122876.1 TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: dsa:Desal_3668 transketolase; SMART: Transketolase central region YP_004122877.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: dsa:Desal_3575 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_004122878.1 KEGG: pfo:Pfl01_0880 phosphate acetyltransferase YP_004122879.1 PFAM: Methyltransferase type 11; KEGG: sus:Acid_7155 methyltransferase type 12 YP_004122880.1 PFAM: sulfatase; KEGG: hoh:Hoch_2284 sulfatase YP_004122881.1 KEGG: kcr:Kcr_0951 transglutaminase family surface protease YP_004122882.1 PFAM: type IV pilus assembly PilZ; KEGG: dsa:Desal_0843 type IV pilus assembly PilZ YP_004122883.1 PFAM: NusB/RsmB/TIM44; Fmu (Sun) domain protein; KEGG: dsa:Desal_0147 NusB/RsmB/TIM44 YP_004122884.1 KEGG: dma:DMR_33500 cation-transporting ATPase; TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004122885.1 TIGRFAM: adenylylsulfate kinase; KEGG: dsa:Desal_3653 adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_004122886.1 KEGG: lif:LinJ36.3270 hypothetical protein YP_004122887.1 KEGG: dsa:Desal_3767 DEAD/DEAH box helicase domain protein; PFAM: Protein of unknown function DUF1998; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004122888.1 KEGG: dol:Dole_2174 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region YP_004122889.1 KEGG: dsa:Desal_0283 hypothetical protein YP_004122890.1 KEGG: xom:XOO_4334 hypothetical protein YP_004122891.1 PFAM: SMC domain protein; KEGG: ana:alr0507 hypothetical protein YP_004122892.1 KEGG: dsa:Desal_3769 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004122893.1 KEGG: dsa:Desal_3715 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004122894.1 PFAM: protein of unknown function DUF152; KEGG: dvl:Dvul_2619 hypothetical protein YP_004122895.1 KEGG: cwo:Cwoe_5162 beta-lactamase domain protein; PFAM: Sterol-binding domain protein; SMART: beta-lactamase domain protein YP_004122896.1 KEGG: pap:PSPA7_4049 putative two-component sensor; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004122897.1 KEGG: cpc:Cpar_2035 Na+/Ca+ antiporter, CaCA family YP_004122898.1 KEGG: drt:Dret_2247 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004122899.1 PFAM: Sporulation domain-containing protein; KEGG: pol:Bpro_1605 sporulation related YP_004122900.1 KEGG: dsa:Desal_3736 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004122901.1 PFAM: histidine triad (HIT) protein; KEGG: drt:Dret_2237 histidine triad (HIT) protein YP_004122902.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: dsa:Desal_3620 polysaccharide biosynthesis protein CapD YP_004122903.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dsa:Desal_3619 DegT/DnrJ/EryC1/StrS aminotransferase YP_004122904.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: cag:Cagg_1999 hexapaptide repeat-containing transferase YP_004122905.1 PFAM: Acyl transferase; KEGG: dsa:Desal_3757 acyl transferase YP_004122906.1 KEGG: dsa:Desal_3822 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_004122907.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mmb:Mmol_0508 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004122908.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: dma:DMR_23830 hypothetical protein YP_004122909.1 PFAM: CheD family protein; KEGG: dma:DMR_23820 chemotaxis protein CheD YP_004122910.1 KEGG: dsa:Desal_1901 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004122911.1 PFAM: metallophosphoesterase; KEGG: afw:Anae109_4135 metallophosphoesterase YP_004122912.1 KEGG: dsa:Desal_3576 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; Localisation of periplasmic protein complexes; SMART: cell wall hydrolase/autolysin YP_004122913.1 KEGG: dds:Ddes_2008 methylenetetrahydrofolate reductase (NAD(P)H); PFAM: methylenetetrahydrofolate reductase YP_004122914.1 PFAM: metallophosphoesterase; KEGG: sfu:Sfum_2718 metallophosphoesterase YP_004122915.1 KEGG: sil:SPO1832 branched-chain amino acid ABC transporter, permease protein YP_004122916.1 KEGG: dsa:Desal_0370 cytochrome c family protein YP_004122917.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsa:Desal_0371 molybdopterin oxidoreductase YP_004122918.1 KEGG: dsa:Desal_0372 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004122919.1 PFAM: Cytochrome b/b6 domain; KEGG: dsa:Desal_0373 formate dehydrogenase gamma subunit YP_004122920.1 KEGG: dsa:Desal_0374 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004122921.1 PFAM: Rhodanese domain protein; KEGG: dsa:Desal_0375 rhodanese-like protein YP_004122922.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dsa:Desal_0286 redoxin domain-containing protein YP_004122923.1 PFAM: TorD-like chaperone; KEGG: dsa:Desal_0377 cytoplasmic chaperone TorD family protein YP_004122924.1 PFAM: protein of unknown function DUF156; KEGG: dsa:Desal_0378 protein of unknown function DUF156 YP_004122925.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: dsa:Desal_3809 GTP-binding protein Era; SMART: AAA ATPase YP_004122926.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Hemolysin-type calcium-binding region; Proprotein convertase P; KEGG: app:CAP2UW1_3240 peptidase S8/S53 subtilisin kexin sedolisin YP_004122927.1 PFAM: peptidase U32; KEGG: dsa:Desal_0063 peptidase U32 YP_004122928.1 PFAM: heat shock protein Hsp20; KEGG: dma:DMR_11460 heat shock protein HSP20 family protein YP_004122929.1 PFAM: heat shock protein Hsp20; KEGG: drt:Dret_0719 heat shock protein HSP20 YP_004122930.1 PFAM: protein of unknown function DUF343; KEGG: dvu:DVU0656 hypothetical protein YP_004122931.1 KEGG: drt:Dret_0717 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004122932.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dsa:Desal_0015 metal dependent phosphohydrolase YP_004122933.1 KEGG: dsa:Desal_0016 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_004122934.1 KEGG: dsa:Desal_0017 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004122935.1 KEGG: dsa:Desal_0018 amidohydrolase; PFAM: amidohydrolase YP_004122936.1 KEGG: dvm:DvMF_2100 hypothetical protein YP_004122937.1 PFAM: Heavy metal transport/detoxification protein; protein of unknown function DUF1697; KEGG: drt:Dret_0995 heavy metal transport/detoxification protein YP_004122938.1 KEGG: gsu:GSU3229 LuxR family DNA-binding response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004122939.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; KEGG: nde:NIDE1491 putative hybrid sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004122940.1 KEGG: drt:Dret_1926 hypothetical protein YP_004122941.1 KEGG: dsa:Desal_1450 CBS domain containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004122942.1 KEGG: dsa:Desal_1780 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004122943.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004122944.1 KEGG: gka:GK2143 hypothetical protein YP_004122945.1 PFAM: integrase family protein; KEGG: dol:Dole_2906 integrase family protein YP_004122946.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: pla:Plav_3239 hypothetical protein YP_004122947.1 KEGG: dat:HRM2_43620 hypothetical protein YP_004122948.1 KEGG: dsa:Desal_0042 protein of unknown function DUF399; PFAM: protein of unknown function DUF399; SMART: PDZ/DHR/GLGF domain protein YP_004122949.1 KEGG: mbu:Mbur_0592 hypothetical protein YP_004122950.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gme:Gmet_2565 transposase IS116/IS110/IS902 YP_004122951.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dsa:Desal_0041 phenylacetate-coenzyme A ligase, putative YP_004122952.1 KEGG: bfo:BRAFLDRAFT_237658 hypothetical protein YP_004122953.1 PFAM: integrase family protein; helicase domain protein; KEGG: dma:DMR_36050 phage integrase family protein YP_004122954.1 KEGG: pfa:PF11_0456 conserved Plasmodium protein YP_004122955.1 KEGG: rxy:Rxyl_1598 hypothetical protein YP_004122956.1 PFAM: Integrase catalytic region; KEGG: dvu:DVU2010 ISD1, transposase OrfB YP_004122957.1 PFAM: transposase IS3/IS911 family protein; KEGG: cko:CKO_00856 hypothetical protein YP_004122958.1 KEGG: xoo:XOO3457 type I restriction system adenine methylase YP_004122959.1 KEGG: nma:NMA0664 putative transposase for IS1016 YP_004122960.1 TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation protein E; PAS fold domain protein; KEGG: drt:Dret_1524 putative PAS/PAC sensor protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; PAC repeat-containing protein YP_004122961.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dat:HRM2_43530 putative anti-anti-sigma regulatory factor YP_004122962.1 KEGG: dat:HRM2_43520 RsbW; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004122963.1 PFAM: type IV pilus assembly PilZ; KEGG: hha:Hhal_0210 hypothetical protein YP_004122964.1 KEGG: hha:Hhal_0209 endoglucanase YP_004122965.1 PFAM: glycosyl transferase family 2; KEGG: drt:Dret_1518 glycosyl transferase family 2 YP_004122966.1 SMART: Tetratricopeptide repeat; KEGG: drt:Dret_1519 hypothetical protein YP_004122967.1 KEGG: drt:Dret_1520 tetratricopeptide repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004122968.1 KEGG: drt:Dret_1520 tetratricopeptide repeat protein YP_004122969.1 manually curated; PFAM: ABC transporter related; KEGG: dma:DMR_45980 ABC transporter ATP-binding protein; SMART: AAA ATPase YP_004122970.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dma:DMR_45990 ABC transporter permease protein YP_004122971.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dma:DMR_46000 ABC transporter permease protein YP_004122972.1 KEGG: dma:DMR_46010 hypothetical protein YP_004122973.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dma:DMR_19390 putative benzoate-CoA ligase YP_004122974.1 KEGG: ppd:Ppro_1523 phosphopantetheine-binding YP_004122975.1 manually curated; KEGG: dat:HRM2_37940 hypothetical protein YP_004122976.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: pfl:PFL_1100 sodium/hydrogen exchanger family protein YP_004122977.1 PFAM: Protein of unknown function DUF3124; KEGG: dba:Dbac_0543 hypothetical protein YP_004122978.1 KEGG: msv:Mesil_0440 hypothetical protein YP_004122979.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; Ion transport 2 domain protein; KEGG: dsa:Desal_1835 TrkA-N domain protein YP_004122980.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dol:Dole_3014 protein of unknown function DUF395 YeeE/YedE YP_004122981.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ppd:Ppro_1978 protein of unknown function DUF395, YeeE/YedE YP_004122982.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dat:HRM2_38010 CoxL YP_004122983.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: dat:HRM2_38000 CoxS YP_004122984.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: dat:HRM2_37990 two-component fusion protein (N:molybdopterin dehydrogenase, FAD-binding domain-C:carbon monoxide dehydrogenase medium chain) YP_004122985.1 KEGG: dat:HRM2_37920 MatE; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004122986.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pca:Pcar_0820 hypothetical protein YP_004122987.1 PFAM: SirA-like domain-containing protein; KEGG: pca:Pcar_0821 hypothetical protein YP_004122988.1 KEGG: dol:Dole_3247 hypothetical protein YP_004122989.1 PFAM: protein of unknown function UPF0031; KEGG: dat:HRM2_44810 hypothetical protein YP_004122990.1 KEGG: dat:HRM2_39100 hypothetical protein YP_004122991.1 KEGG: dba:Dbac_2097 nitrite reductase (cytochrome; ammonia-forming); PFAM: cytochrome c552 YP_004122992.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: dba:Dbac_2096 NapC/NirT cytochrome c family protein YP_004122993.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YsiA domain-containing protein; KEGG: oca:OCAR_4861 transcriptional regulator of TetR family protein YP_004122994.1 KEGG: sfu:Sfum_3176 hypothetical protein YP_004122995.1 PFAM: acriflavin resistance protein; KEGG: dma:DMR_34140 efflux system protein YP_004122996.1 KEGG: dma:DMR_34130 efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004122997.1 PFAM: alpha-2-macroglobulin domain protein 2; Alpha-2-macroglobulin MG1 domain; Alpha-2-macroglobulin, thiol-ester bond-forming; alpha-2-macroglobulin domain protein; KEGG: dba:Dbac_2638 alpha-2-macroglobulin domain protein YP_004122998.1 KEGG: dba:Dbac_2639 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; Penicillin-binding domain protein; penicillin-binding protein transpeptidase YP_004122999.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dsa:Desal_3710 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein YP_004123000.1 PFAM: glycosyl transferase group 1; KEGG: dsa:Desal_3711 glycosyl transferase group 1 YP_004123001.1 KEGG: drt:Dret_0080 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004123002.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: dsa:Desal_3753 aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase YP_004123003.1 PFAM: C-methyltransferase; Methyltransferase type 11; Methyltransferase domain protein; KEGG: sat:SYN_02651 methyltransferase YP_004123004.1 KEGG: slt:Slit_2897 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004123005.1 KEGG: sed:SeD_A2431 CDP-glucose 4,6-dehydratase; TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004123006.1 KEGG: sat:SYN_02649 glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase YP_004123007.1 KEGG: slt:Slit_2893 cephalosporin hydroxylase YP_004123008.1 PFAM: Methyltransferase type 11; KEGG: ppw:PputW619_3714 methyltransferase type 11 YP_004123009.1 KEGG: dol:Dole_1963 NAD-dependent epimerase/dehydratase; manually curated; PFAM: NAD-dependent epimerase/dehydratase YP_004123010.1 KEGG: pfo:Pfl01_1517 glycosyl transferase family protein YP_004123011.1 PFAM: transposase IS4 family protein; KEGG: cyc:PCC7424_5670 transposase ISAs1 family protein YP_004123012.1 KEGG: mtp:Mthe_0727 NAD+ synthetase; TIGRFAM: NAD+ synthetase YP_004123013.1 PFAM: protein of unknown function DUF115; KEGG: bpm:BURPS1710b_3662 cell wall surface anchor family protein, putative YP_004123014.1 KEGG: swd:Swoo_3748 histidine kinase YP_004123015.1 KEGG: dsa:Desal_3780 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding YP_004123016.1 KEGG: dsa:Desal_0033 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_004123017.1 PFAM: Peptidase M16C associated domain protein; peptidase M16 domain protein; KEGG: dsa:Desal_0032 peptidase M16C associated domain protein YP_004123018.1 TIGRFAM: glutamine synthetase, type I; KEGG: dsa:Desal_3792 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_004123019.1 PFAM: UspA domain-containing protein; KEGG: dsa:Desal_2322 UspA domain protein YP_004123020.1 PFAM: sugar transferase; KEGG: sno:Snov_3220 undecaprenyl-phosphate galactose phosphotransferase YP_004123021.1 PFAM: glycosyl transferase group 1; KEGG: dsa:Desal_3614 glycosyl transferase group 1 YP_004123022.1 PFAM: Protein of unknown function DUF2088; KEGG: dps:DP1667 iron-sulfur cluster-binding protein YP_004123023.1 KEGG: dsa:Desal_3266 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004123024.1 PFAM: MscS Mechanosensitive ion channel; KEGG: dsa:Desal_3654 MscS mechanosensitive ion channel YP_004123025.1 KEGG: dsa:Desal_3779 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004123026.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: drt:Dret_1286 apurinic endonuclease Apn1; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004123027.1 KEGG: lip:LI0344 hypothetical protein YP_004123028.1 KEGG: dsa:Desal_1562 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein YP_004123029.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dvm:DvMF_2589 lysine exporter protein (LysE/YggA) YP_004123030.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004123031.1 KEGG: dba:Dbac_0602 response regulator receiver protein YP_004123032.1 KEGG: mpd:MCP_0988 hypothetical protein YP_004123033.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: dsa:Desal_3480 Mg chelatase, subunit ChlI; SMART: AAA ATPase YP_004123034.1 KEGG: mbr:MONBRDRAFT_35482 hypothetical protein YP_004123035.1 PFAM: Protein of unknown function DUF3568; KEGG: dba:Dbac_2744 hypothetical protein YP_004123036.1 KEGG: cme:CMH195C chromatin remodeling complex SWI/SNF component, Snf2 YP_004123037.1 KEGG: dsa:Desal_3793 hypothetical protein YP_004123038.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dba:Dbac_2122 transcriptional regulator, LysR family YP_004123039.1 KEGG: bte:BTH_I0690 ABC transporter solute-binding protein YP_004123040.1 PFAM: Rubrerythrin; KEGG: dsa:Desal_2708 rubrerythrin YP_004123041.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gur:Gura_1198 LysR family transcriptional regulator YP_004123043.1 KEGG: dsa:Desal_3603 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase YP_004123044.1 KEGG: vei:Veis_2613 hypothetical protein YP_004123045.1 KEGG: bac:BamMC406_6537 fis family transcriptional regulator YP_004123046.1 PFAM: integrase family protein; KEGG: dol:Dole_2906 integrase family protein YP_004123047.1 KEGG: dde:Dde_0735 hypothetical protein YP_004123048.1 KEGG: dde:Dde_0736 phosphoglycerate mutase (GpmB protein)-like; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase YP_004123049.1 PFAM: glycosyl transferase group 1; KEGG: dal:Dalk_0579 glycosyl transferase group 1 YP_004123050.1 KEGG: dba:Dbac_0179 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004123051.1 KEGG: dsa:Desal_3787 tetratricopeptide TPR_2 repeat protein YP_004123052.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: dsa:Desal_3786 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004123053.1 TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; KEGG: dsa:Desal_3785 DNA gyrase, B subunit; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_004123054.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: dsa:Desal_3784 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_004123055.1 KEGG: dsa:Desal_3783 chromosomal replication initiator DnaA domain protein; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_004123056.1 PFAM: protein of unknown function DUF39; KEGG: dvm:DvMF_1464 protein of unknown function DUF39 YP_004123057.1 PFAM: aminotransferase class IV; KEGG: dsa:Desal_1100 aminotransferase class IV YP_004123058.1 PFAM: Chorismate binding-like; KEGG: dsa:Desal_1099 anthranilate synthase YP_004123059.1 PFAM: glutamine amidotransferase class-I; KEGG: dsa:Desal_1098 glutamine amidotransferase class-I YP_004123060.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: dsa:Desal_3433 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004123061.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: dsa:Desal_3434 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_004123062.1 KEGG: dsa:Desal_3589 hypothetical protein YP_004123063.1 KEGG: dsa:Desal_3590 hypothetical protein YP_004123064.1 KEGG: dsa:Desal_3591 hypothetical protein YP_004123065.1 manually curated; KEGG: nma:NMA0664 putative transposase for IS1016 YP_004123066.1 PFAM: transposase IS3/IS911 family protein; KEGG: dvl:Dvul_2579 transposase IS3/IS911 family protein YP_004123067.1 KEGG: det:DET0166 ISDet2, transposase orfB; manually curated; PFAM: Integrase catalytic region YP_004123068.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: dsa:Desal_3823 pyruvate ferredoxin/flavodoxin oxidoreductase YP_004123069.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: dvm:DvMF_2056 thiamine pyrophosphate protein domain protein TPP-binding YP_004123070.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: dsa:Desal_3825 2-ketoisovalerate ferredoxin reductase YP_004123071.1 KEGG: dsa:Desal_3826 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004123072.1 KEGG: dvm:DvMF_2053 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004123073.1 KEGG: dsa:Desal_3828 hypothetical protein YP_004123074.1 KEGG: dal:Dalk_4409 putative lipoprotein YP_004123075.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: dsa:Desal_3830 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_004123076.1 manually curated; KEGG: dsa:Desal_3831 hypothetical protein YP_004123077.1 PFAM: protein of unknown function DUF107; KEGG: drt:Dret_1025 protein of unknown function DUF107 YP_004123078.1 KEGG: dsa:Desal_3833 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_004123079.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dsa:Desal_3834 NAD-dependent epimerase/dehydratase