-- dump date 20140619_063927 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 696281000001 SEQ_END SEQ_END NC_015589.1 3969014 3969014 DR NC_015589.1; contig end 3969014..3969014 Desulfotomaculum ruminis DSM 2154 YP_004543594.1 CDS Desru_0001 NC_015589.1 106 1434 D TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: drm:Dred_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 106..1434 Desulfotomaculum ruminis DSM 2154 10740302 YP_004543595.1 CDS Desru_0002 NC_015589.1 1666 2763 D SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: drm:Dred_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 1666..2763 Desulfotomaculum ruminis DSM 2154 10736344 YP_004543596.1 CDS Desru_0003 NC_015589.1 2778 2993 D KEGG: drm:Dred_0003 RNA-binding S4 domain-containing protein; RNA-binding S4 domain-containing protein 2778..2993 Desulfotomaculum ruminis DSM 2154 10736345 YP_004543597.1 CDS Desru_0004 NC_015589.1 3004 4119 D KEGG: drm:Dred_0004 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 3004..4119 Desulfotomaculum ruminis DSM 2154 10736346 YP_004543598.1 CDS Desru_0005 NC_015589.1 4119 4379 D KEGG: drm:Dred_0005 hypothetical protein; hypothetical protein 4119..4379 Desulfotomaculum ruminis DSM 2154 10736347 YP_004543599.1 CDS Desru_0006 NC_015589.1 4548 6467 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: drm:Dred_0006 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; DNA gyrase subunit B 4548..6467 Desulfotomaculum ruminis DSM 2154 10736348 YP_004543600.1 CDS Desru_0007 NC_015589.1 6565 7503 D PFAM: O-methyltransferase family 2; KEGG: pth:PTH_1424 hypothetical protein; O-methyltransferase family 2 6565..7503 Desulfotomaculum ruminis DSM 2154 10736349 YP_004543601.1 CDS Desru_0008 NC_015589.1 7678 10131 D SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: drm:Dred_0007 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 7678..10131 Desulfotomaculum ruminis DSM 2154 10736350 YP_004543602.1 CDS Desru_0009 NC_015589.1 15767 15901 D hypothetical protein 15767..15901 Desulfotomaculum ruminis DSM 2154 10736354 YP_004543603.1 CDS Desru_0010 NC_015589.1 15927 17168 D KEGG: drm:Dred_0009 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein 15927..17168 Desulfotomaculum ruminis DSM 2154 10736355 YP_004543604.1 CDS Desru_0012 NC_015589.1 17413 18183 D PFAM: YheO-like domain-containing protein; KEGG: drm:Dred_0613 YheO domain-containing protein; YheO-like domain-containing protein 17413..18183 Desulfotomaculum ruminis DSM 2154 10736357 YP_004543605.1 CDS Desru_0013 NC_015589.1 18206 18589 D KEGG: drm:Dred_0614 putative endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 18206..18589 Desulfotomaculum ruminis DSM 2154 10736358 YP_004543606.1 CDS Desru_0014 NC_015589.1 18614 19822 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: drm:Dred_0615 threonine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 18614..19822 Desulfotomaculum ruminis DSM 2154 10736359 YP_004543607.1 CDS Desru_0015 NC_015589.1 19989 20090 D KEGG: ilo:IL1037 Na+/H+ - glutamate/aspartate symport protein; hypothetical protein 19989..20090 Desulfotomaculum ruminis DSM 2154 10736360 YP_004543608.1 CDS Desru_0016 NC_015589.1 20060 21223 D PFAM: sodium:dicarboxylate symporter; KEGG: bmq:BMQ_3410 proton/glutamate symport protein; sodium:dicarboxylate symporter 20060..21223 Desulfotomaculum ruminis DSM 2154 10736361 YP_004543609.1 CDS Desru_0017 NC_015589.1 21399 22283 D KEGG: drm:Dred_0617 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; pyridoxine biosynthesis protein 21399..22283 Desulfotomaculum ruminis DSM 2154 10736362 YP_004543610.1 CDS Desru_0018 NC_015589.1 22289 22861 D KEGG: pth:PTH_0010 glutamine amidotransferase subunit PdxT; TIGRFAM: SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase; SNO glutamine amidotransferase 22289..22861 Desulfotomaculum ruminis DSM 2154 10736363 YP_004543611.1 CDS Desru_0019 NC_015589.1 22918 23304 D KEGG: rha:RHA1_ro04536 hypothetical protein; hypothetical protein 22918..23304 Desulfotomaculum ruminis DSM 2154 10736364 YP_004543612.1 CDS Desru_0020 NC_015589.1 23438 23731 D KEGG: drm:Dred_0012 hypothetical protein; hypothetical protein 23438..23731 Desulfotomaculum ruminis DSM 2154 10736365 YP_004543613.1 CDS Desru_0021 NC_015589.1 24156 25313 D PFAM: aminotransferase class V; KEGG: drm:Dred_0013 aminotransferase, class V; class V aminotransferase 24156..25313 Desulfotomaculum ruminis DSM 2154 10736366 YP_004543614.1 CDS Desru_0022 NC_015589.1 25310 26890 D TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: drm:Dred_0014 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; D-3-phosphoglycerate dehydrogenase 25310..26890 Desulfotomaculum ruminis DSM 2154 10736367 YP_004543615.1 CDS Desru_0023 NC_015589.1 27064 28338 D TIGRFAM: seryl-tRNA synthetase; KEGG: drm:Dred_0015 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 27064..28338 Desulfotomaculum ruminis DSM 2154 10736368 YP_004543616.1 CDS Desru_0024 NC_015589.1 28805 29206 D KEGG: art:Arth_2195 hypothetical protein; hypothetical protein 28805..29206 Desulfotomaculum ruminis DSM 2154 10736371 YP_004543617.1 CDS Desru_0025 NC_015589.1 29300 29977 R PFAM: CBS domain containing protein; KEGG: drm:Dred_0016 hypothetical protein; hypothetical protein complement(29300..29977) Desulfotomaculum ruminis DSM 2154 10736372 YP_004543618.1 CDS Desru_0026 NC_015589.1 30491 30943 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: drm:Dred_0017 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase zinc-binding protein 30491..30943 Desulfotomaculum ruminis DSM 2154 10736376 YP_004543619.1 CDS Desru_0027 NC_015589.1 31318 32025 D KEGG: dae:Dtox_0488 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 31318..32025 Desulfotomaculum ruminis DSM 2154 10736378 YP_004543620.1 CDS Desru_0028 NC_015589.1 32015 33142 D KEGG: ckr:CKR_0015 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein 32015..33142 Desulfotomaculum ruminis DSM 2154 10736379 YP_004543621.1 CDS Desru_0029 NC_015589.1 33237 34214 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: ckr:CKR_0017 hypothetical protein; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 33237..34214 Desulfotomaculum ruminis DSM 2154 10736380 YP_004543622.1 CDS Desru_0030 NC_015589.1 34366 34707 R PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: dae:Dtox_3161 hypothetical protein; DnaJ family protein complement(34366..34707) Desulfotomaculum ruminis DSM 2154 10736381 YP_004543623.1 CDS Desru_0031 NC_015589.1 34740 35366 R PFAM: regulatory protein TetR; KEGG: amt:Amet_1502 TetR family transcriptional regulator; regulatory protein TetR complement(34740..35366) Desulfotomaculum ruminis DSM 2154 10736382 YP_004543624.1 CDS Desru_0032 NC_015589.1 35584 36000 D KEGG: gme:Gmet_2130 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 35584..36000 Desulfotomaculum ruminis DSM 2154 10736383 YP_004543625.1 CDS Desru_0034 NC_015589.1 36571 37443 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_1667 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 36571..37443 Desulfotomaculum ruminis DSM 2154 10736385 YP_004543626.1 CDS Desru_0035 NC_015589.1 37476 38360 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dae:Dtox_0493 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 37476..38360 Desulfotomaculum ruminis DSM 2154 10736386 YP_004543627.1 CDS Desru_0036 NC_015589.1 38418 39584 D KEGG: dhd:Dhaf_1669 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 38418..39584 Desulfotomaculum ruminis DSM 2154 10736387 YP_004543628.1 CDS Desru_0037 NC_015589.1 39581 41023 D KEGG: dae:Dtox_0495 hypothetical protein; hypothetical protein 39581..41023 Desulfotomaculum ruminis DSM 2154 10736388 YP_004543629.1 CDS Desru_0038 NC_015589.1 40992 42107 D KEGG: dae:Dtox_0496 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter-like protein 40992..42107 Desulfotomaculum ruminis DSM 2154 10736389 YP_004543630.1 CDS Desru_0039 NC_015589.1 42171 43547 D PFAM: extracellular solute-binding protein family 1; KEGG: dae:Dtox_0497 extracellular solute-binding protein family 1; family 1 extracellular solute-binding protein 42171..43547 Desulfotomaculum ruminis DSM 2154 10736390 YP_004543631.1 CDS Desru_0041 NC_015589.1 44239 44427 D manually curated; KEGG: cbb:CLD_3763 hypothetical protein; hypothetical protein 44239..44427 Desulfotomaculum ruminis DSM 2154 10736392 YP_004543632.1 CDS Desru_0042 NC_015589.1 44804 45532 D PFAM: acyl-ACP thioesterase; KEGG: gym:GYMC10_0920 acyl-ACP thioesterase; acyl-ACP thioesterase 44804..45532 Desulfotomaculum ruminis DSM 2154 10736393 YP_004543633.1 CDS Desru_0043 NC_015589.1 45522 45983 R PFAM: GCN5-related N-acetyltransferase; KEGG: ddi:DDB_G0272424 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(45522..45983) Desulfotomaculum ruminis DSM 2154 10736394 YP_004543634.1 CDS Desru_0044 NC_015589.1 46006 46497 R KEGG: bmd:BMD_1613 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(46006..46497) Desulfotomaculum ruminis DSM 2154 10736395 YP_004543635.1 CDS Desru_0045 NC_015589.1 46706 47359 R PFAM: protein of unknown function DUF161; KEGG: cpy:Cphy_1610 hypothetical protein; hypothetical protein complement(46706..47359) Desulfotomaculum ruminis DSM 2154 10736396 YP_004543636.1 CDS Desru_0046 NC_015589.1 47484 48287 D KEGG: cdl:CDR20291_1269 MerR-family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; regulatory protein MerR 47484..48287 Desulfotomaculum ruminis DSM 2154 10736397 YP_004543637.1 CDS Desru_0048 NC_015589.1 49972 50085 R hypothetical protein complement(49972..50085) Desulfotomaculum ruminis DSM 2154 10736399 YP_004543638.1 CDS Desru_0049 NC_015589.1 50082 50429 R PFAM: regulatory protein MarR; KEGG: clj:CLJU_c33110 putative MarR family transcriptional regulator; regulatory protein MarR complement(50082..50429) Desulfotomaculum ruminis DSM 2154 10736400 YP_004543639.1 CDS Desru_0050 NC_015589.1 50536 50976 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dae:Dtox_2038 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 50536..50976 Desulfotomaculum ruminis DSM 2154 10736401 YP_004543640.1 CDS Desru_0052 NC_015589.1 51692 51958 R KEGG: cbe:Cbei_3209 hypothetical protein; hypothetical protein complement(51692..51958) Desulfotomaculum ruminis DSM 2154 10736403 YP_004543641.1 CDS Desru_0053 NC_015589.1 52198 52851 R KEGG: erg:ERGA_CDS_02180 phosphatidylglycerophosphatase A; hypothetical protein complement(52198..52851) Desulfotomaculum ruminis DSM 2154 10736404 YP_004543642.1 CDS Desru_0054 NC_015589.1 52958 53290 R PFAM: branched-chain amino acid transport; KEGG: bsu:BSU26700 branched-chain amino acid transporter; branched-chain amino acid transport complement(52958..53290) Desulfotomaculum ruminis DSM 2154 10736405 YP_004543643.1 CDS Desru_0055 NC_015589.1 53287 53994 R KEGG: bsu:BSU26710 branched-chain amino acid transporter; TIGRFAM: branched-chain amino acid transporter, AzlC; PFAM: AzlC family protein; branched-chain amino acid transporter AzlC complement(53287..53994) Desulfotomaculum ruminis DSM 2154 10736406 YP_004543644.1 CDS Desru_0057 NC_015589.1 56002 56679 D KEGG: chy:CHY_0786 cotJC protein; PFAM: manganese containing catalase; catalase 56002..56679 Desulfotomaculum ruminis DSM 2154 10736408 YP_004543645.1 CDS Desru_0058 NC_015589.1 56819 58021 R PFAM: major facilitator superfamily MFS_1; KEGG: cbb:CLD_0913 major facilitator family protein; major facilitator superfamily protein complement(56819..58021) Desulfotomaculum ruminis DSM 2154 10736409 YP_004543646.1 CDS Desru_0059 NC_015589.1 58304 59131 D KEGG: bss:BSUW23_01130 putative AraC/XylS family, cupin family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 58304..59131 Desulfotomaculum ruminis DSM 2154 10736410 YP_004543647.1 CDS Desru_0060 NC_015589.1 59179 60102 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bld:BLi00251 YbfH; hypothetical protein 59179..60102 Desulfotomaculum ruminis DSM 2154 10736411 YP_004543648.1 CDS Desru_0061 NC_015589.1 60513 62018 D KEGG: tjr:TherJR_0363 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 60513..62018 Desulfotomaculum ruminis DSM 2154 10736412 YP_004543649.1 CDS Desru_0062 NC_015589.1 62083 63015 D KEGG: swo:Swol_1363 YobV; DeoR family transcriptional regulator 62083..63015 Desulfotomaculum ruminis DSM 2154 10736413 YP_004543650.1 CDS Desru_0063 NC_015589.1 63082 63543 D PFAM: transcription activator effector binding; KEGG: swo:Swol_1364 hypothetical protein; transcription activator effector binding protein 63082..63543 Desulfotomaculum ruminis DSM 2154 10736414 YP_004543651.1 CDS Desru_0064 NC_015589.1 63709 65322 D KEGG: drm:Dred_1485 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 63709..65322 Desulfotomaculum ruminis DSM 2154 10736415 YP_004543652.1 CDS Desru_0065 NC_015589.1 65364 65696 D PFAM: arsenate reductase and related; KEGG: lbf:LBF_2477 glutaredoxin family protein; arsenate reductase-like protein 65364..65696 Desulfotomaculum ruminis DSM 2154 10736416 YP_004543653.1 CDS Desru_0066 NC_015589.1 65864 66820 D KEGG: dae:Dtox_2061 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component; pyruvate dehydrogenase 65864..66820 Desulfotomaculum ruminis DSM 2154 10736417 YP_004543654.1 CDS Desru_0067 NC_015589.1 66847 67824 D PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: dae:Dtox_2062 transketolase domain protein; transketolase domain-containing protein 66847..67824 Desulfotomaculum ruminis DSM 2154 10736418 YP_004543655.1 CDS Desru_0068 NC_015589.1 68204 69196 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: nth:Nther_0771 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 68204..69196 Desulfotomaculum ruminis DSM 2154 10736419 YP_004543656.1 CDS Desru_0069 NC_015589.1 69559 71001 D KEGG: pth:PTH_2639 response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; sigma-54 factor interaction domain-containing protein 69559..71001 Desulfotomaculum ruminis DSM 2154 10736420 YP_004543657.1 CDS Desru_0070 NC_015589.1 71252 71416 D KEGG: bbe:BBR47_52160 two-component sensor histidine kinase; two-component sensor histidine kinase 71252..71416 Desulfotomaculum ruminis DSM 2154 10736421 YP_004543658.1 CDS Desru_0071 NC_015589.1 71522 71935 D KEGG: dau:Daud_1560 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW domain-containing protein 71522..71935 Desulfotomaculum ruminis DSM 2154 10736422 YP_004543659.1 CDS Desru_0072 NC_015589.1 71954 73510 D KEGG: drm:Dred_1557 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein 71954..73510 Desulfotomaculum ruminis DSM 2154 10736423 YP_004543660.1 CDS Desru_0073 NC_015589.1 73605 74168 D KEGG: acl:ACL_0673 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein 73605..74168 Desulfotomaculum ruminis DSM 2154 10736424 YP_004543661.1 CDS Desru_0074 NC_015589.1 74243 74776 R TIGRFAM: signal peptidase I; KEGG: cyh:Cyan8802_0195 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(74243..74776) Desulfotomaculum ruminis DSM 2154 10736425 YP_004543662.1 CDS Desru_0075 NC_015589.1 74862 75182 R KEGG: drm:Dred_1541 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(74862..75182) Desulfotomaculum ruminis DSM 2154 10736426 YP_004543663.1 CDS Desru_0076 NC_015589.1 75182 76477 R KEGG: drm:Dred_1540 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; electron-transferring-flavoprotein dehydrogenase complement(75182..76477) Desulfotomaculum ruminis DSM 2154 10736427 YP_004543664.1 CDS Desru_0077 NC_015589.1 76470 77771 R PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: dae:Dtox_1936 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein subunit alpha/beta complement(76470..77771) Desulfotomaculum ruminis DSM 2154 10736428 YP_004543665.1 CDS Desru_0078 NC_015589.1 77787 78593 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: drm:Dred_1538 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta complement(77787..78593) Desulfotomaculum ruminis DSM 2154 10736429 YP_004543666.1 CDS Desru_0079 NC_015589.1 78887 80332 R KEGG: chy:CHY_0060 anion transporter family protein; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter complement(78887..80332) Desulfotomaculum ruminis DSM 2154 10736430 YP_004543667.1 CDS Desru_0080 NC_015589.1 80461 82677 R KEGG: dhd:Dhaf_2268 ATP-dependent DNA helicase replicase; ATP-dependent DNA helicase replicase complement(80461..82677) Desulfotomaculum ruminis DSM 2154 10736431 YP_004543668.1 CDS Desru_0081 NC_015589.1 83006 84409 D TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: dhd:Dhaf_0365 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein; PAS sensor protein 83006..84409 Desulfotomaculum ruminis DSM 2154 10736432 YP_004543669.1 CDS Desru_0082 NC_015589.1 84797 85975 D PFAM: iron-containing alcohol dehydrogenase; KEGG: pca:Pcar_2847 alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 84797..85975 Desulfotomaculum ruminis DSM 2154 10736433 YP_004543670.1 CDS Desru_0083 NC_015589.1 86037 87458 D PFAM: Aldehyde Dehydrogenase; KEGG: bmq:BMQ_3643 aldehyde dehydrogenase (NAD) family protein; aldehyde dehydrogenase 86037..87458 Desulfotomaculum ruminis DSM 2154 10736434 YP_004543671.1 CDS Desru_0084 NC_015589.1 88031 88975 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mrb:Mrub_2461 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 88031..88975 Desulfotomaculum ruminis DSM 2154 10736435 YP_004543672.1 CDS Desru_0085 NC_015589.1 89001 90062 D KEGG: dhd:Dhaf_4412 malate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; malate dehydrogenase 89001..90062 Desulfotomaculum ruminis DSM 2154 10736436 YP_004543673.1 CDS Desru_0086 NC_015589.1 90195 90473 D PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein; SAF domain-containing protein 90195..90473 Desulfotomaculum ruminis DSM 2154 10736437 YP_004543674.1 CDS Desru_0087 NC_015589.1 90482 91642 D KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; altronate dehydratase 90482..91642 Desulfotomaculum ruminis DSM 2154 10736438 YP_004543675.1 CDS Desru_0088 NC_015589.1 91783 93216 D PFAM: major facilitator superfamily MFS_1; KEGG: bmq:BMQ_3321 transporter major facilitator superfamily; major facilitator superfamily protein 91783..93216 Desulfotomaculum ruminis DSM 2154 10736439 YP_004543676.1 CDS Desru_0089 NC_015589.1 93287 94144 D KEGG: dba:Dbac_2146 6-phosphogluconate dehydrogenase NAD-binding; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 93287..94144 Desulfotomaculum ruminis DSM 2154 10736440 YP_004543677.1 CDS Desru_0090 NC_015589.1 94282 95181 D PFAM: alpha/beta hydrolase fold; KEGG: dal:Dalk_0030 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 94282..95181 Desulfotomaculum ruminis DSM 2154 10736441 YP_004543678.1 CDS Desru_0091 NC_015589.1 95183 97657 R KEGG: pth:PTH_2806 transcriptional regulator; PFAM: cyclic nucleotide-binding; sigma-54 factor interaction domain-containing protein; SMART: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(95183..97657) Desulfotomaculum ruminis DSM 2154 10736442 YP_004543679.1 CDS Desru_0092 NC_015589.1 98452 100122 D SMART: AAA ATPase; KEGG: drm:Dred_0041 phosphoribulokinase/uridine kinase; AAA ATPase 98452..100122 Desulfotomaculum ruminis DSM 2154 10736444 YP_004543680.1 CDS Desru_0093 NC_015589.1 100170 101306 R KEGG: dae:Dtox_0610 protein of unknown function DUF362; hypothetical protein complement(100170..101306) Desulfotomaculum ruminis DSM 2154 10736445 YP_004543681.1 CDS Desru_0094 NC_015589.1 101540 103183 D TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: drm:Dred_0042 DNA polymerase III, subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 101540..103183 Desulfotomaculum ruminis DSM 2154 10736446 YP_004543682.1 CDS Desru_0095 NC_015589.1 103209 103526 D PFAM: Uncharacterised protein family UPF0133; KEGG: drm:Dred_0043 hypothetical protein; hypothetical protein 103209..103526 Desulfotomaculum ruminis DSM 2154 10736447 YP_004543683.1 CDS Desru_0096 NC_015589.1 103765 104370 D TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: drm:Dred_0044 recombination protein RecR; SMART: Toprim sub domain-containing protein; recombination protein RecR 103765..104370 Desulfotomaculum ruminis DSM 2154 10736448 YP_004543684.1 CDS Desru_0097 NC_015589.1 104632 104895 D KEGG: drm:Dred_0045 hypothetical protein; TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA; pro-sigmaK processing inhibitor BofA 104632..104895 Desulfotomaculum ruminis DSM 2154 10736449 YP_004543685.1 CDS Desru_0098 NC_015589.1 105192 105863 D KEGG: drm:Dred_0046 hypothetical protein; hypothetical protein 105192..105863 Desulfotomaculum ruminis DSM 2154 10736450 YP_004543686.1 CDS Desru_0099 NC_015589.1 105942 107027 D PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: drm:Dred_0047 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 105942..107027 Desulfotomaculum ruminis DSM 2154 10736451 YP_004543687.1 CDS Desru_0100 NC_015589.1 107061 107834 D PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: drm:Dred_0048 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein 107061..107834 Desulfotomaculum ruminis DSM 2154 10736452 YP_004543688.1 CDS Desru_0101 NC_015589.1 107827 108393 D KEGG: drm:Dred_0049 pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; pyruvate/ketoisovalerate oxidoreductase subunit gamma 107827..108393 Desulfotomaculum ruminis DSM 2154 10736453 YP_004543689.1 CDS Desru_0102 NC_015589.1 108409 108660 D KEGG: drm:Dred_2822 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 108409..108660 Desulfotomaculum ruminis DSM 2154 10736454 YP_004543690.1 CDS Desru_0103 NC_015589.1 108759 109844 R KEGG: drm:Dred_0051 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein complement(108759..109844) Desulfotomaculum ruminis DSM 2154 10736455 YP_004543691.1 CDS Desru_0104 NC_015589.1 109899 110144 R KEGG: drm:Dred_0052 hypothetical protein; hypothetical protein complement(109899..110144) Desulfotomaculum ruminis DSM 2154 10736456 YP_004543692.1 CDS Desru_0105 NC_015589.1 110158 111378 R KEGG: drm:Dred_0053 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; germination protein Ger(x)C family complement(110158..111378) Desulfotomaculum ruminis DSM 2154 10736457 YP_004543693.1 CDS Desru_0106 NC_015589.1 111382 113007 R PFAM: GerA spore germination protein; KEGG: drm:Dred_0054 GerA spore germination protein; GerA spore germination protein complement(111382..113007) Desulfotomaculum ruminis DSM 2154 10736458 YP_004543694.1 CDS Desru_0107 NC_015589.1 113008 114117 R KEGG: drm:Dred_0055 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein complement(113008..114117) Desulfotomaculum ruminis DSM 2154 10736459 YP_004543695.1 CDS Desru_0108 NC_015589.1 114369 114557 D PFAM: Sigma-G inhibitor, Gin; KEGG: drm:Dred_0056 hypothetical protein; sigma-G inhibitor Gin 114369..114557 Desulfotomaculum ruminis DSM 2154 10736460 YP_004543696.1 CDS Desru_0109 NC_015589.1 114512 114781 R KEGG: drm:Dred_0057 hypothetical protein; hypothetical protein complement(114512..114781) Desulfotomaculum ruminis DSM 2154 10736461 YP_004543697.1 CDS Desru_0110 NC_015589.1 114941 116389 D PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: drm:Dred_0058 Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase major region 114941..116389 Desulfotomaculum ruminis DSM 2154 10736462 YP_004543698.1 CDS Desru_0111 NC_015589.1 116423 117046 D TIGRFAM: thymidylate kinase; KEGG: drm:Dred_0059 dTMP kinase; PFAM: thymidylate kinase; thymidylate kinase 116423..117046 Desulfotomaculum ruminis DSM 2154 10736463 YP_004543699.1 CDS Desru_0112 NC_015589.1 117039 118046 D TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: drm:Dred_0060 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 117039..118046 Desulfotomaculum ruminis DSM 2154 10736464 YP_004543700.1 CDS Desru_0113 NC_015589.1 118036 118884 D PFAM: PSP1 domain protein; KEGG: drm:Dred_0061 PSP1 domain-containing protein; PSP1 domain-containing protein 118036..118884 Desulfotomaculum ruminis DSM 2154 10736465 YP_004543701.1 CDS Desru_0114 NC_015589.1 118859 119170 D PFAM: protein of unknown function DUF972; KEGG: drm:Dred_0062 hypothetical protein; hypothetical protein 118859..119170 Desulfotomaculum ruminis DSM 2154 10736466 YP_004543702.1 CDS Desru_0115 NC_015589.1 119157 120053 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: drm:Dred_0063 uroporphyrin-III C/tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 119157..120053 Desulfotomaculum ruminis DSM 2154 10736467 YP_004543703.1 CDS Desru_0116 NC_015589.1 120124 120378 R KEGG: drm:Dred_0064 AbrB family transcriptional regulator; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; AbrB family transcriptional regulator complement(120124..120378) Desulfotomaculum ruminis DSM 2154 10736468 YP_004543704.1 CDS Desru_0117 NC_015589.1 120576 121097 D PFAM: transposase IS3/IS911 family protein; KEGG: bmj:BMULJ_05181 ISBmu5a transposase; transposase IS3/IS911 family protein 120576..121097 Desulfotomaculum ruminis DSM 2154 10736469 YP_004543705.1 CDS Desru_0118 NC_015589.1 121115 121924 D PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB; integrase catalytic subunit 121115..121924 Desulfotomaculum ruminis DSM 2154 10736470 YP_004543706.1 CDS Desru_0119 NC_015589.1 122285 123835 D KEGG: drm:Dred_0065 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); methionyl-tRNA synthetase 122285..123835 Desulfotomaculum ruminis DSM 2154 10736471 YP_004543707.1 CDS Desru_0120 NC_015589.1 124039 124821 D KEGG: drm:Dred_0066 TatD family hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; hydrolase TatD family 124039..124821 Desulfotomaculum ruminis DSM 2154 10736472 YP_004543708.1 CDS Desru_0121 NC_015589.1 124814 125344 D TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: drm:Dred_0067 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 124814..125344 Desulfotomaculum ruminis DSM 2154 10736473 YP_004543709.1 CDS Desru_0122 NC_015589.1 125506 126156 D PFAM: cyclase family protein; KEGG: cbe:Cbei_3925 cyclase family protein; cyclase family protein 125506..126156 Desulfotomaculum ruminis DSM 2154 10736474 YP_004543710.1 CDS Desru_0123 NC_015589.1 126235 127239 R KEGG: drm:Dred_0068 hypothetical protein; hypothetical protein complement(126235..127239) Desulfotomaculum ruminis DSM 2154 10736475 YP_004543711.1 CDS Desru_0124 NC_015589.1 127451 128284 D PFAM: 3D domain-containing protein; G5 domain protein; KEGG: drm:Dred_0069 3D domain-containing protein; hypothetical protein 127451..128284 Desulfotomaculum ruminis DSM 2154 10736476 YP_004543712.1 CDS Desru_0125 NC_015589.1 128429 129361 D PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348; KEGG: drm:Dred_0070 3D domain-containing protein; hypothetical protein 128429..129361 Desulfotomaculum ruminis DSM 2154 10736477 YP_004543713.1 CDS Desru_0126 NC_015589.1 129622 130293 D KEGG: dae:Dtox_1795 thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; thiamine pyrophosphokinase 129622..130293 Desulfotomaculum ruminis DSM 2154 10736478 YP_004543714.1 CDS Desru_0127 NC_015589.1 130275 130562 D PFAM: protein of unknown function DUF77; KEGG: tjr:TherJR_0062 protein of unknown function DUF77; hypothetical protein 130275..130562 Desulfotomaculum ruminis DSM 2154 10736479 YP_004543715.1 CDS Desru_0128 NC_015589.1 130591 131349 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tjr:TherJR_0063 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 130591..131349 Desulfotomaculum ruminis DSM 2154 10736480 YP_004543716.1 CDS Desru_0129 NC_015589.1 131352 132350 D KEGG: drm:Dred_3204 membrane lipoprotein lipid attachment site; membrane lipoprotein lipid attachment site 131352..132350 Desulfotomaculum ruminis DSM 2154 10736481 YP_004543717.1 CDS Desru_0130 NC_015589.1 132347 133108 D KEGG: rop:ROP_13040 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 132347..133108 Desulfotomaculum ruminis DSM 2154 10736482 YP_004543718.1 CDS Desru_0131 NC_015589.1 133327 134142 D KEGG: drm:Dred_0071 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 133327..134142 Desulfotomaculum ruminis DSM 2154 10736483 YP_004543719.1 CDS Desru_0132 NC_015589.1 134182 135480 D KEGG: drm:Dred_2890 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 134182..135480 Desulfotomaculum ruminis DSM 2154 10736484 YP_004543720.1 CDS Desru_0133 NC_015589.1 135501 136151 D KEGG: pth:PTH_0926 hypothetical protein; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 135501..136151 Desulfotomaculum ruminis DSM 2154 10736485 YP_004543721.1 CDS Desru_0134 NC_015589.1 136135 136335 D KEGG: drm:Dred_0072 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 136135..136335 Desulfotomaculum ruminis DSM 2154 10736486 YP_004543722.1 CDS Desru_0135 NC_015589.1 136319 137113 D PFAM: thiazole biosynthesis family protein; KEGG: drm:Dred_0073 thiazole biosynthesis family protein; thiazole biosynthesis family protein 136319..137113 Desulfotomaculum ruminis DSM 2154 10736487 YP_004543723.1 CDS Desru_0136 NC_015589.1 137115 138224 D KEGG: drm:Dred_0074 thiazole biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; thiazole biosynthesis protein ThiH 137115..138224 Desulfotomaculum ruminis DSM 2154 10736488 YP_004543724.1 CDS Desru_0137 NC_015589.1 138221 138853 D KEGG: pth:PTH_0642 thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein; thiamine biosynthesis protein ThiF 138221..138853 Desulfotomaculum ruminis DSM 2154 10736489 YP_004543725.1 CDS Desru_0138 NC_015589.1 138877 139506 D KEGG: dae:Dtox_1683 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 138877..139506 Desulfotomaculum ruminis DSM 2154 10736490 YP_004543726.1 CDS Desru_0139 NC_015589.1 139781 140659 D SMART: Ribosomal RNA adenine methylase transferase-like; TIGRFAM: dimethyladenosine transferase; KEGG: drm:Dred_0077 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase 139781..140659 Desulfotomaculum ruminis DSM 2154 10736491 YP_004543727.1 CDS Desru_0140 NC_015589.1 140890 141360 D PFAM: protein of unknown function DUF458; KEGG: drm:Dred_0078 hypothetical protein; hypothetical protein 140890..141360 Desulfotomaculum ruminis DSM 2154 10736492 YP_004543728.1 CDS Desru_0142 NC_015589.1 141967 142464 R KEGG: dhd:Dhaf_0029 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; iron dependent repressor complement(141967..142464) Desulfotomaculum ruminis DSM 2154 10736494 YP_004543729.1 CDS Desru_0143 NC_015589.1 142779 143720 D PFAM: periplasmic solute binding protein; KEGG: dhd:Dhaf_0030 periplasmic solute binding protein; periplasmic solute binding protein 142779..143720 Desulfotomaculum ruminis DSM 2154 10736495 YP_004543730.1 CDS Desru_0144 NC_015589.1 143736 144488 D KEGG: dhd:Dhaf_0031 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 143736..144488 Desulfotomaculum ruminis DSM 2154 10736496 YP_004543731.1 CDS Desru_0145 NC_015589.1 144490 145413 D PFAM: ABC-3 protein; KEGG: dsy:DSY0094 hypothetical protein; ABC-3 protein 144490..145413 Desulfotomaculum ruminis DSM 2154 10736497 YP_004543732.1 CDS Desru_0146 NC_015589.1 145397 146404 D KEGG: dhd:Dhaf_0033 ABC-3 protein; manually curated; PFAM: ABC-3 protein; ABC-3 protein 145397..146404 Desulfotomaculum ruminis DSM 2154 10736498 YP_004543733.1 CDS Desru_0147 NC_015589.1 146446 146643 D hypothetical protein 146446..146643 Desulfotomaculum ruminis DSM 2154 10736499 YP_004543734.1 CDS Desru_0149 NC_015589.1 147164 148081 D KEGG: drm:Dred_0079 peptidase U57, YabG; TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG; sporulation peptidase YabG 147164..148081 Desulfotomaculum ruminis DSM 2154 10736501 YP_004543735.1 CDS Desru_0150 NC_015589.1 148147 149151 D KEGG: drm:Dred_0080 hypothetical protein; hypothetical protein 148147..149151 Desulfotomaculum ruminis DSM 2154 10736502 YP_004543736.1 CDS Desru_0151 NC_015589.1 149499 150446 D PFAM: SCP-like extracellular; KEGG: drm:Dred_0081 allergen V5/TPX-1 family protein; SCP-like extracellular protein 149499..150446 Desulfotomaculum ruminis DSM 2154 10736503 YP_004543737.1 CDS Desru_0152 NC_015589.1 150637 152274 D KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein 150637..152274 Desulfotomaculum ruminis DSM 2154 10736504 YP_004543738.1 CDS Desru_0153 NC_015589.1 152303 153355 D KEGG: drm:Dred_0083 hypothetical protein; hypothetical protein 152303..153355 Desulfotomaculum ruminis DSM 2154 10736505 YP_004543739.1 CDS Desru_0154 NC_015589.1 153507 154214 D KEGG: drm:Dred_0084 hypothetical protein; hypothetical protein 153507..154214 Desulfotomaculum ruminis DSM 2154 10736506 YP_004543740.1 CDS Desru_0155 NC_015589.1 154230 154535 D PFAM: Uncharacterised protein family UPF0133; KEGG: drm:Dred_0085 hypothetical protein; hypothetical protein 154230..154535 Desulfotomaculum ruminis DSM 2154 10736507 YP_004543741.1 CDS Desru_0156 NC_015589.1 154550 154849 D PFAM: Uncharacterised protein family UPF0133; KEGG: drm:Dred_0086 hypothetical protein; hypothetical protein 154550..154849 Desulfotomaculum ruminis DSM 2154 10736508 YP_004543742.1 CDS Desru_0157 NC_015589.1 155042 155269 D KEGG: mpd:MCP_0336 hypothetical protein; hypothetical protein 155042..155269 Desulfotomaculum ruminis DSM 2154 10736509 YP_004543743.1 CDS Desru_0158 NC_015589.1 155375 155905 D KEGG: drm:Dred_0088 hypothetical protein; hypothetical protein 155375..155905 Desulfotomaculum ruminis DSM 2154 10736510 YP_004543744.1 CDS Desru_0159 NC_015589.1 155942 157024 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: drm:Dred_0089 peptidase S8/S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 155942..157024 Desulfotomaculum ruminis DSM 2154 10736511 YP_004543745.1 CDS Desru_0160 NC_015589.1 157183 157425 D KEGG: drm:Dred_0090 hypothetical protein; hypothetical protein 157183..157425 Desulfotomaculum ruminis DSM 2154 10736512 YP_004543746.1 CDS Desru_0161 NC_015589.1 157574 158020 D PFAM: protein of unknown function DUF606; KEGG: drm:Dred_0091 hypothetical protein; hypothetical protein 157574..158020 Desulfotomaculum ruminis DSM 2154 10736513 YP_004543747.1 CDS Desru_0162 NC_015589.1 158178 158753 R KEGG: drm:Dred_0093 ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein complement(158178..158753) Desulfotomaculum ruminis DSM 2154 10736514 YP_004543748.1 CDS Desru_0163 NC_015589.1 158951 159808 D KEGG: drm:Dred_0094 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 158951..159808 Desulfotomaculum ruminis DSM 2154 10736515 YP_004543749.1 CDS Desru_0164 NC_015589.1 159891 160583 D KEGG: drm:Dred_0095 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 159891..160583 Desulfotomaculum ruminis DSM 2154 10736516 YP_004543750.1 CDS Desru_0165 NC_015589.1 160576 161358 D KEGG: drm:Dred_0096 hypothetical protein; hypothetical protein 160576..161358 Desulfotomaculum ruminis DSM 2154 10736517 YP_004543751.1 CDS Desru_0166 NC_015589.1 161391 162605 D KEGG: drm:Dred_0097 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; threonine dehydratase 161391..162605 Desulfotomaculum ruminis DSM 2154 10736518 YP_004543752.1 CDS Desru_0167 NC_015589.1 162721 162975 D PFAM: SpoVG family protein; KEGG: drm:Dred_0098 SpoVG family protein; SpoVG family protein 162721..162975 Desulfotomaculum ruminis DSM 2154 10736519 YP_004543753.1 CDS Desru_0168 NC_015589.1 163248 164612 D KEGG: drm:Dred_0099 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase 163248..164612 Desulfotomaculum ruminis DSM 2154 10736520 YP_004543754.1 CDS Desru_0169 NC_015589.1 164728 165675 D TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: drm:Dred_0100 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 164728..165675 Desulfotomaculum ruminis DSM 2154 10736521 YP_004543755.1 CDS Desru_0170 NC_015589.1 166511 166723 D KEGG: rno:690311 similar to Alpha-1-antitrypsin-related protein precursor; hypothetical protein 166511..166723 Desulfotomaculum ruminis DSM 2154 10736522 YP_004543756.1 CDS Desru_0171 NC_015589.1 167021 168220 D PFAM: protein of unknown function DUF39; KEGG: drm:Dred_0101 hypothetical protein; hypothetical protein 167021..168220 Desulfotomaculum ruminis DSM 2154 10736523 YP_004543757.1 CDS Desru_0172 NC_015589.1 168241 168642 D PFAM: NIL domain; KEGG: drm:Dred_0102 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; NIL domain-containing protein 168241..168642 Desulfotomaculum ruminis DSM 2154 10736524 YP_004543758.1 CDS Desru_0173 NC_015589.1 168644 169384 D PFAM: ApbE family lipoprotein; KEGG: drm:Dred_0103 hypothetical protein; ApbE family lipoprotein 168644..169384 Desulfotomaculum ruminis DSM 2154 10736525 YP_004543759.1 CDS Desru_0174 NC_015589.1 169561 169806 D KEGG: bpt:Bpet0960 hypothetical protein; hypothetical protein 169561..169806 Desulfotomaculum ruminis DSM 2154 10736526 YP_004543760.1 CDS Desru_0175 NC_015589.1 169895 170314 D PFAM: Rubrerythrin; KEGG: drm:Dred_0104 rubrerythrin; rubrerythrin 169895..170314 Desulfotomaculum ruminis DSM 2154 10736527 YP_004543761.1 CDS Desru_0176 NC_015589.1 170711 170890 D KEGG: drm:Dred_0106 hypothetical protein; hypothetical protein 170711..170890 Desulfotomaculum ruminis DSM 2154 10736528 YP_004543762.1 CDS Desru_0177 NC_015589.1 170982 171929 R PFAM: PRC-barrel domain protein; KEGG: drm:Dred_0107 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein complement(170982..171929) Desulfotomaculum ruminis DSM 2154 10736529 YP_004543763.1 CDS Desru_0178 NC_015589.1 172144 172782 D KEGG: drm:Dred_0108 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 172144..172782 Desulfotomaculum ruminis DSM 2154 10736530 YP_004543764.1 CDS Desru_0179 NC_015589.1 172844 173407 D TIGRFAM: peptidyl-tRNA hydrolase; KEGG: drm:Dred_0109 aminoacyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 172844..173407 Desulfotomaculum ruminis DSM 2154 10736531 YP_004543765.1 CDS Desru_0180 NC_015589.1 173659 174066 D KEGG: drm:Dred_0110 hypothetical protein; hypothetical protein 173659..174066 Desulfotomaculum ruminis DSM 2154 10736532 YP_004543766.1 CDS Desru_0181 NC_015589.1 174297 177806 D TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: drm:Dred_0111 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 174297..177806 Desulfotomaculum ruminis DSM 2154 10736533 YP_004543767.1 CDS Desru_0182 NC_015589.1 177870 178895 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: drm:Dred_0112 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 177870..178895 Desulfotomaculum ruminis DSM 2154 10736534 YP_004543768.1 CDS Desru_0183 NC_015589.1 179028 179588 D KEGG: drm:Dred_0113 AbrB family transcriptional regulator; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; stage V sporulation protein T 179028..179588 Desulfotomaculum ruminis DSM 2154 10736535 YP_004543769.1 CDS Desru_0184 NC_015589.1 179897 181423 D KEGG: drm:Dred_0114 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG family protein 179897..181423 Desulfotomaculum ruminis DSM 2154 10736536 YP_004543770.1 CDS Desru_0185 NC_015589.1 181553 181840 D KEGG: drm:Dred_0115 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein 181553..181840 Desulfotomaculum ruminis DSM 2154 10736537 YP_004543771.1 CDS Desru_0186 NC_015589.1 181870 182112 D KEGG: drm:Dred_0116 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 181870..182112 Desulfotomaculum ruminis DSM 2154 10736538 YP_004543772.1 CDS Desru_0187 NC_015589.1 182228 183175 D KEGG: drm:Dred_0117 SpoIID/LytB domain-containing protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D; SpoIID/LytB domain-containing protein 182228..183175 Desulfotomaculum ruminis DSM 2154 10736539 YP_004543773.1 CDS Desru_0188 NC_015589.1 183522 184781 D SMART: metal-dependent phosphohydrolase HD region; KEGG: bts:Btus_2993 metal dependent phosphohydrolase; metal-dependent phosphohydrolase 183522..184781 Desulfotomaculum ruminis DSM 2154 10736540 YP_004543774.1 CDS Desru_0189 NC_015589.1 184781 185296 D KEGG: bts:Btus_2994 hypothetical protein; hypothetical protein 184781..185296 Desulfotomaculum ruminis DSM 2154 10736541 YP_004543775.1 CDS Desru_0190 NC_015589.1 185467 185751 D KEGG: drm:Dred_0118 YabP family protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; sporulation protein YabP 185467..185751 Desulfotomaculum ruminis DSM 2154 10736542 YP_004543776.1 CDS Desru_0191 NC_015589.1 185791 186330 D KEGG: drm:Dred_0119 hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like; spore cortex biosynthesis protein YabQ 185791..186330 Desulfotomaculum ruminis DSM 2154 10736543 YP_004543777.1 CDS Desru_0192 NC_015589.1 186494 186730 D PFAM: Sigma-70 region 4 type 2; KEGG: drm:Dred_0120 ECF subfamily RNA polymerase sigma-24 factor; sigma-70 region 4 type 2 186494..186730 Desulfotomaculum ruminis DSM 2154 10736544 YP_004543778.1 CDS Desru_0193 NC_015589.1 186727 187173 D PFAM: Septum formation initiator; KEGG: drm:Dred_0121 septum formation initiator; septum formation initiator 186727..187173 Desulfotomaculum ruminis DSM 2154 10736545 YP_004543779.1 CDS Desru_0194 NC_015589.1 187261 187659 D PFAM: RNA binding S1 domain protein; KEGG: drm:Dred_0122 RNA-binding S1 domain-containing protein; RNA binding S1 domain-containing protein 187261..187659 Desulfotomaculum ruminis DSM 2154 10736546 YP_004543780.1 CDS Desru_0195 NC_015589.1 187994 188884 D PFAM: Ppx/GppA phosphatase; KEGG: drm:Dred_0123 Ppx/GppA phosphatase; Ppx/GppA phosphatase 187994..188884 Desulfotomaculum ruminis DSM 2154 10736547 YP_004543781.1 CDS Desru_0196 NC_015589.1 188971 191433 D SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: drm:Dred_0124 phosphoprotein phosphatase; PFAM: Stage II sporulation protein E; stage II sporulation protein E 188971..191433 Desulfotomaculum ruminis DSM 2154 10736548 YP_004543782.1 CDS Desru_0197 NC_015589.1 191713 193137 D KEGG: drm:Dred_0125 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; tRNA(Ile)-lysidine synthetase 191713..193137 Desulfotomaculum ruminis DSM 2154 10736549 YP_004543783.1 CDS Desru_0198 NC_015589.1 193215 195041 D SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: drm:Dred_0126 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; ATP-dependent metalloprotease FtsH 193215..195041 Desulfotomaculum ruminis DSM 2154 10736550 YP_004543784.1 CDS Desru_0199 NC_015589.1 195097 195546 D PFAM: nucleoside diphosphate kinase; KEGG: drm:Dred_0127 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 195097..195546 Desulfotomaculum ruminis DSM 2154 10736551 YP_004543785.1 CDS Desru_0200 NC_015589.1 195644 196048 D KEGG: drm:Dred_0128 hypothetical protein; hypothetical protein 195644..196048 Desulfotomaculum ruminis DSM 2154 10736552 YP_004543786.1 CDS Desru_0201 NC_015589.1 196145 197848 D KEGG: drm:Dred_0129 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; Formate--tetrahydrofolate ligase 196145..197848 Desulfotomaculum ruminis DSM 2154 10736553 YP_004543787.1 CDS Desru_0202 NC_015589.1 198079 199299 D PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_1837 major facilitator superfamily MFS_1; major facilitator superfamily protein 198079..199299 Desulfotomaculum ruminis DSM 2154 10736554 YP_004543788.1 CDS Desru_0203 NC_015589.1 199377 199889 D KEGG: dae:Dtox_1190 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein; PfpI family intracellular protease 199377..199889 Desulfotomaculum ruminis DSM 2154 10736555 YP_004543789.1 CDS Desru_0204 NC_015589.1 200088 200312 D KEGG: abn:AB57_2723 hypothetical protein; hypothetical protein 200088..200312 Desulfotomaculum ruminis DSM 2154 10736556 YP_004543790.1 CDS Desru_0205 NC_015589.1 200948 203977 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_0143 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 200948..203977 Desulfotomaculum ruminis DSM 2154 10736557 YP_004543791.1 CDS Desru_0206 NC_015589.1 203993 204196 D KEGG: dpe:Dper_GL21957 GL21957 gene product from transcript GL21957-RA; hypothetical protein 203993..204196 Desulfotomaculum ruminis DSM 2154 10736558 YP_004543792.1 CDS Desru_0207 NC_015589.1 204211 204633 D KEGG: dae:Dtox_1278 methyl-viologen-reducing hydrogenase delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit; methyl-viologen-reducing hydrogenase subunit delta 204211..204633 Desulfotomaculum ruminis DSM 2154 10736559 YP_004543793.1 CDS Desru_0208 NC_015589.1 204647 205591 D PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: drm:Dred_0146 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein 204647..205591 Desulfotomaculum ruminis DSM 2154 10736560 YP_004543794.1 CDS Desru_0209 NC_015589.1 205609 206613 D KEGG: drm:Dred_0147 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 205609..206613 Desulfotomaculum ruminis DSM 2154 10736561 YP_004543795.1 CDS Desru_0210 NC_015589.1 206636 207469 D PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: drm:Dred_0148 oxidoreductase FAD/NAD(P)-binding subunit; dihydroorotate dehydrogenase electron transfer subunit 206636..207469 Desulfotomaculum ruminis DSM 2154 10736562 YP_004543796.1 CDS Desru_0211 NC_015589.1 207511 208782 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_0142 hypothetical protein; hypothetical protein 207511..208782 Desulfotomaculum ruminis DSM 2154 10736563 YP_004543797.1 CDS Desru_0212 NC_015589.1 208956 211985 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_0143 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 208956..211985 Desulfotomaculum ruminis DSM 2154 10736564 YP_004543798.1 CDS Desru_0213 NC_015589.1 212001 212204 D KEGG: dpe:Dper_GL21957 GL21957 gene product from transcript GL21957-RA; hypothetical protein 212001..212204 Desulfotomaculum ruminis DSM 2154 10736565 YP_004543799.1 CDS Desru_0214 NC_015589.1 212219 212641 D KEGG: dae:Dtox_1278 methyl-viologen-reducing hydrogenase delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit; methyl-viologen-reducing hydrogenase subunit delta 212219..212641 Desulfotomaculum ruminis DSM 2154 10736566 YP_004543800.1 CDS Desru_0215 NC_015589.1 212655 213599 D PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: drm:Dred_0146 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein 212655..213599 Desulfotomaculum ruminis DSM 2154 10736567 YP_004543801.1 CDS Desru_0216 NC_015589.1 213617 214621 D KEGG: drm:Dred_0147 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 213617..214621 Desulfotomaculum ruminis DSM 2154 10736568 YP_004543802.1 CDS Desru_0217 NC_015589.1 214644 215477 D PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: drm:Dred_0148 oxidoreductase FAD/NAD(P)-binding subunit; dihydroorotate dehydrogenase electron transfer subunit 214644..215477 Desulfotomaculum ruminis DSM 2154 10736569 YP_004543803.1 CDS Desru_0218 NC_015589.1 215566 216525 R KEGG: drm:Dred_0727 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; copper amine oxidase-like domain-containing protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein complement(215566..216525) Desulfotomaculum ruminis DSM 2154 10736570 YP_004543804.1 CDS Desru_0219 NC_015589.1 216557 218038 R PFAM: membrane-flanked domain; KEGG: rci:RRC269 hypothetical protein; hypothetical protein complement(216557..218038) Desulfotomaculum ruminis DSM 2154 10736571 YP_004543805.1 CDS Desru_0220 NC_015589.1 218028 218507 R PFAM: membrane-flanked domain; KEGG: bsu:BSU04590 hypothetical protein; hypothetical protein complement(218028..218507) Desulfotomaculum ruminis DSM 2154 10736572 YP_004543806.1 CDS Desru_0222 NC_015589.1 220262 220720 D KEGG: cbi:CLJ_B1057 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 220262..220720 Desulfotomaculum ruminis DSM 2154 10736574 YP_004543807.1 CDS Desru_0223 NC_015589.1 220710 221279 D PFAM: cyclase family protein; KEGG: cby:CLM_1170 putative cyclase; cyclase family protein 220710..221279 Desulfotomaculum ruminis DSM 2154 10736575 YP_004543808.1 CDS Desru_0224 NC_015589.1 221451 222263 D PFAM: asparagine synthase; KEGG: drm:Dred_0151 PP-loop domain-containing protein; asparagine synthase 221451..222263 Desulfotomaculum ruminis DSM 2154 10736576 YP_004543809.1 CDS Desru_0225 NC_015589.1 222269 222682 D PFAM: thioesterase superfamily protein; KEGG: drm:Dred_0152 thioesterase superfamily protein; thioesterase superfamily protein 222269..222682 Desulfotomaculum ruminis DSM 2154 10736577 YP_004543810.1 CDS Desru_0226 NC_015589.1 222751 223272 D PFAM: nitroreductase; KEGG: drm:Dred_0153 nitroreductase; nitroreductase 222751..223272 Desulfotomaculum ruminis DSM 2154 10736578 YP_004543811.1 CDS Desru_0227 NC_015589.1 223296 223877 R KEGG: dae:Dtox_2182 hypothetical protein; hypothetical protein complement(223296..223877) Desulfotomaculum ruminis DSM 2154 10736579 YP_004543812.1 CDS Desru_0228 NC_015589.1 223897 224382 R KEGG: gct:GC56T3_1404 hypothetical protein; hypothetical protein complement(223897..224382) Desulfotomaculum ruminis DSM 2154 10736580 YP_004543813.1 CDS Desru_0229 NC_015589.1 224379 225140 R KEGG: dae:Dtox_1632 hypothetical protein; hypothetical protein complement(224379..225140) Desulfotomaculum ruminis DSM 2154 10736581 YP_004543814.1 CDS Desru_0230 NC_015589.1 225186 225683 D KEGG: hmo:HM1_0417 hypothetical protein; hypothetical protein 225186..225683 Desulfotomaculum ruminis DSM 2154 10736582 YP_004543815.1 CDS Desru_0231 NC_015589.1 225742 227643 R PFAM: E1-E2 ATPase-associated domain protein; KEGG: kra:Krad_0290 heavy metal translocating P-type ATPase; E1-E2 ATPase-associated domain-containing protein complement(225742..227643) Desulfotomaculum ruminis DSM 2154 10736583 YP_004543816.1 CDS Desru_0232 NC_015589.1 227716 228909 D TIGRFAM: dihydropteroate synthase; KEGG: drm:Dred_0154 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 227716..228909 Desulfotomaculum ruminis DSM 2154 10736584 YP_004543817.1 CDS Desru_0233 NC_015589.1 228899 229264 D TIGRFAM: dihydroneopterin aldolase; KEGG: drm:Dred_0155 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 228899..229264 Desulfotomaculum ruminis DSM 2154 10736585 YP_004543818.1 CDS Desru_0234 NC_015589.1 229270 229773 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: drm:Dred_0156 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 229270..229773 Desulfotomaculum ruminis DSM 2154 10736586 YP_004543819.1 CDS Desru_0235 NC_015589.1 230287 231747 R KEGG: drm:Dred_0158 metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; Polynucleotide adenylyltransferase region complement(230287..231747) Desulfotomaculum ruminis DSM 2154 10736587 YP_004543820.1 CDS Desru_0236 NC_015589.1 231795 232304 R PFAM: protein of unknown function DUF1648; KEGG: msv:Mesil_1612 protein of unknown function DUF1648; hypothetical protein complement(231795..232304) Desulfotomaculum ruminis DSM 2154 10736588 YP_004543821.1 CDS Desru_0237 NC_015589.1 232683 233714 D PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: drm:Dred_0159 6-phosphogluconate dehydrogenase, NAD-binding; hypothetical protein 232683..233714 Desulfotomaculum ruminis DSM 2154 10736589 YP_004543822.1 CDS Desru_0238 NC_015589.1 233566 234399 D PFAM: Ketopantoate hydroxymethyltransferase; manually curated; KEGG: drm:Dred_0160 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 233566..234399 Desulfotomaculum ruminis DSM 2154 10736590 YP_004543823.1 CDS Desru_0239 NC_015589.1 234411 235256 D KEGG: drm:Dred_0161 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 234411..235256 Desulfotomaculum ruminis DSM 2154 10736591 YP_004543824.1 CDS Desru_0240 NC_015589.1 235259 235642 D TIGRFAM: aspartate 1-decarboxylase; KEGG: drm:Dred_0162 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 235259..235642 Desulfotomaculum ruminis DSM 2154 10736592 YP_004543825.1 CDS Desru_0241 NC_015589.1 235751 236674 D TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: drm:Dred_0163 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 235751..236674 Desulfotomaculum ruminis DSM 2154 10736593 YP_004543826.1 CDS Desru_0242 NC_015589.1 236725 238308 D TIGRFAM: L-aspartate oxidase; KEGG: drm:Dred_0164 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 236725..238308 Desulfotomaculum ruminis DSM 2154 10736594 YP_004543827.1 CDS Desru_0243 NC_015589.1 238322 239203 D TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: drm:Dred_0165 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 238322..239203 Desulfotomaculum ruminis DSM 2154 10736595 YP_004543828.1 CDS Desru_0244 NC_015589.1 239223 240197 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: drm:Dred_0430 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase complement(239223..240197) Desulfotomaculum ruminis DSM 2154 10736596 YP_004543829.1 CDS Desru_0245 NC_015589.1 240375 240767 D KEGG: drm:Dred_2972 hypothetical protein; hypothetical protein 240375..240767 Desulfotomaculum ruminis DSM 2154 10736597 YP_004543830.1 CDS Desru_0246 NC_015589.1 241084 242070 D TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; KEGG: drm:Dred_0168 biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase 241084..242070 Desulfotomaculum ruminis DSM 2154 10736598 YP_004543831.1 CDS Desru_0247 NC_015589.1 242145 242720 D PFAM: BioY protein; KEGG: drm:Dred_0169 BioY protein; BioY protein 242145..242720 Desulfotomaculum ruminis DSM 2154 10736599 YP_004543832.1 CDS Desru_0248 NC_015589.1 242751 243593 R PFAM: GCN5-related N-acetyltransferase; KEGG: drm:Dred_0739 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(242751..243593) Desulfotomaculum ruminis DSM 2154 10736600 YP_004543833.1 CDS Desru_0250 NC_015589.1 245386 246042 R PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: drm:Dred_0170 nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region complement(245386..246042) Desulfotomaculum ruminis DSM 2154 10736602 YP_004543834.1 CDS Desru_0251 NC_015589.1 246267 247064 D TIGRFAM: transcriptional activator, Baf family; KEGG: drm:Dred_0171 Baf family transcriptional activator; PFAM: Bvg accessory factor; transcriptional activator Baf family 246267..247064 Desulfotomaculum ruminis DSM 2154 10736603 YP_004543835.1 CDS Desru_0252 NC_015589.1 247055 248014 D KEGG: drm:Dred_0172 nifR3 family TIM-barrel protein; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; TIM-barrel fold family protein 247055..248014 Desulfotomaculum ruminis DSM 2154 10736604 YP_004543836.1 CDS Desru_0253 NC_015589.1 248207 249280 D PFAM: polysaccharide biosynthesis protein CapD; KEGG: drm:Dred_0173 shikimate/quinate 5-dehydrogenase; polysaccharide biosynthesis protein CapD 248207..249280 Desulfotomaculum ruminis DSM 2154 10736605 YP_004543837.1 CDS Desru_0254 NC_015589.1 249476 249949 D KEGG: drm:Dred_0174 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreA 249476..249949 Desulfotomaculum ruminis DSM 2154 10736606 YP_004543838.1 CDS Desru_0255 NC_015589.1 249973 251499 D KEGG: drm:Dred_0175 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; lysyl-tRNA synthetase 249973..251499 Desulfotomaculum ruminis DSM 2154 10736607 YP_004543839.1 CDS Desru_0256 NC_015589.1 257776 259659 D KEGG: dae:Dtox_2003 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 257776..259659 Desulfotomaculum ruminis DSM 2154 10736614 YP_004543840.1 CDS Desru_0257 NC_015589.1 259695 260693 D KEGG: dae:Dtox_2005 chaperone DnaJ domain protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; chaperone DnaJ domain-containing protein 259695..260693 Desulfotomaculum ruminis DSM 2154 10736615 YP_004543841.1 CDS Desru_0258 NC_015589.1 260696 260995 D KEGG: tjr:TherJR_0927 hypothetical protein; hypothetical protein 260696..260995 Desulfotomaculum ruminis DSM 2154 10736616 YP_004543842.1 CDS Desru_0259 NC_015589.1 261026 263626 D TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: tjr:TherJR_0928 ATP-dependent chaperone ClpB; SMART: AAA ATPase; ATP-dependent chaperone ClpB 261026..263626 Desulfotomaculum ruminis DSM 2154 10736617 YP_004543843.1 CDS Desru_0260 NC_015589.1 264091 264555 D PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: drm:Dred_0177 Firmicute transcriptional repressor of class III stress genes; transcriptional repressor of class III stress genes 264091..264555 Desulfotomaculum ruminis DSM 2154 10736618 YP_004543844.1 CDS Desru_0261 NC_015589.1 264577 265089 D PFAM: UvrB/UvrC protein; KEGG: drm:Dred_0178 UvrB/UvrC protein; UvrB/UvrC protein 264577..265089 Desulfotomaculum ruminis DSM 2154 10736619 YP_004543845.1 CDS Desru_0262 NC_015589.1 265102 266172 D PFAM: ATP:guanido phosphotransferase; KEGG: drm:Dred_0179 ATP:guanido phosphotransferase; ATP:guanido phosphotransferase 265102..266172 Desulfotomaculum ruminis DSM 2154 10736620 YP_004543846.1 CDS Desru_0263 NC_015589.1 266184 268631 D KEGG: drm:Dred_0180 ATPase; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; ATPase AAA-2 domain-containing protein 266184..268631 Desulfotomaculum ruminis DSM 2154 10736621 YP_004543847.1 CDS Desru_0264 NC_015589.1 268843 270195 D TIGRFAM: DNA repair protein RadA; PFAM: DnaB domain protein helicase domain protein; KEGG: drm:Dred_0182 DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA 268843..270195 Desulfotomaculum ruminis DSM 2154 10736622 YP_004543848.1 CDS Desru_0265 NC_015589.1 270207 271292 D PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; helix-hairpin-helix motif; KEGG: drm:Dred_0183 DNA integrity scanning protein DisA; DNA integrity scanning DisA linker region 270207..271292 Desulfotomaculum ruminis DSM 2154 10736623 YP_004543849.1 CDS Desru_0266 NC_015589.1 271363 271758 R KEGG: drm:Dred_0184 hypothetical protein; hypothetical protein complement(271363..271758) Desulfotomaculum ruminis DSM 2154 10736624 YP_004543850.1 CDS Desru_0267 NC_015589.1 271950 272426 D PFAM: transcription factor CarD; KEGG: drm:Dred_0185 CarD family transcriptional regulator; transcription factor CarD 271950..272426 Desulfotomaculum ruminis DSM 2154 10736625 YP_004543851.1 CDS Desru_0268 NC_015589.1 272544 273683 D KEGG: drm:Dred_0186 PilT domain-containing protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; PilT protein domain-containing protein 272544..273683 Desulfotomaculum ruminis DSM 2154 10736626 YP_004543852.1 CDS Desru_0269 NC_015589.1 273676 274371 D KEGG: drm:Dred_0187 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 273676..274371 Desulfotomaculum ruminis DSM 2154 10736627 YP_004543853.1 CDS Desru_0270 NC_015589.1 274442 274918 D KEGG: drm:Dred_0188 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 274442..274918 Desulfotomaculum ruminis DSM 2154 10736628 YP_004543854.1 CDS Desru_0271 NC_015589.1 275043 276740 D KEGG: pth:PTH_2867 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; glutaminyl-tRNA synthetase 275043..276740 Desulfotomaculum ruminis DSM 2154 10736629 YP_004543855.1 CDS Desru_0272 NC_015589.1 276971 277303 R KEGG: drm:Dred_0190 hypothetical protein; hypothetical protein complement(276971..277303) Desulfotomaculum ruminis DSM 2154 10736630 YP_004543856.1 CDS Desru_0273 NC_015589.1 277524 278972 D KEGG: drm:Dred_0191 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 277524..278972 Desulfotomaculum ruminis DSM 2154 10736631 YP_004543857.1 CDS Desru_0274 NC_015589.1 279124 279810 D TIGRFAM: serine O-acetyltransferase; KEGG: drm:Dred_0192 serine O-acetyltransferase; serine O-acetyltransferase 279124..279810 Desulfotomaculum ruminis DSM 2154 10736632 YP_004543858.1 CDS Desru_0275 NC_015589.1 279812 281272 D TIGRFAM: cysteinyl-tRNA synthetase; KEGG: drm:Dred_0193 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; cysteinyl-tRNA synthetase 279812..281272 Desulfotomaculum ruminis DSM 2154 10736633 YP_004543859.1 CDS Desru_0276 NC_015589.1 281276 281686 D KEGG: drm:Dred_0194 ribonuclease III; PFAM: ribonuclease III; SMART: ribonuclease III; ribonuclease III 281276..281686 Desulfotomaculum ruminis DSM 2154 10736634 YP_004543860.1 CDS Desru_0277 NC_015589.1 281781 282647 D KEGG: drm:Dred_0195 FAD-dependent thymidylate synthase; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX; thymidylate synthase flavin-dependent 281781..282647 Desulfotomaculum ruminis DSM 2154 10736635 YP_004543861.1 CDS Desru_0278 NC_015589.1 282654 282818 D KEGG: mgi:Mflv_4477 hypothetical protein; hypothetical protein 282654..282818 Desulfotomaculum ruminis DSM 2154 10736636 YP_004543862.1 CDS Desru_0279 NC_015589.1 282904 283797 D KEGG: drm:Dred_0196 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase 282904..283797 Desulfotomaculum ruminis DSM 2154 10736637 YP_004543863.1 CDS Desru_0280 NC_015589.1 283800 284318 D PFAM: protein of unknown function DUF901; KEGG: drm:Dred_0197 hypothetical protein; hypothetical protein 283800..284318 Desulfotomaculum ruminis DSM 2154 10736638 YP_004543864.1 CDS Desru_0281 NC_015589.1 284514 285164 D manually curated; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; KEGG: drm:Dred_0198 RNA polymerase factor sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; RNA polymerase sigma-H factor 284514..285164 Desulfotomaculum ruminis DSM 2154 10736639 YP_004543865.1 CDS Desru_0282 NC_015589.1 286310 287512 D KEGG: drm:Dred_0213 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu 286310..287512 Desulfotomaculum ruminis DSM 2154 10736645 YP_004543866.1 CDS Desru_0283 NC_015589.1 287927 288076 D manually curated; TIGRFAM: ribosomal protein L33; KEGG: drm:Dred_0200 50S ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 287927..288076 Desulfotomaculum ruminis DSM 2154 10736646 YP_004543867.1 CDS Desru_0284 NC_015589.1 288182 288535 D KEGG: drm:Dred_0201 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; preprotein translocase subunit SecE 288182..288535 Desulfotomaculum ruminis DSM 2154 10736647 YP_004543868.1 CDS Desru_0285 NC_015589.1 288591 289118 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: drm:Dred_0202 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein; transcription termination/antitermination factor NusG 288591..289118 Desulfotomaculum ruminis DSM 2154 10736648 YP_004543869.1 CDS Desru_0286 NC_015589.1 289148 289576 D TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: drm:Dred_0203 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 289148..289576 Desulfotomaculum ruminis DSM 2154 10736649 YP_004543870.1 CDS Desru_0287 NC_015589.1 289628 290317 D KEGG: drm:Dred_0204 ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 289628..290317 Desulfotomaculum ruminis DSM 2154 10736650 YP_004543871.1 CDS Desru_0288 NC_015589.1 290574 291110 D PFAM: ribosomal protein L10; KEGG: drm:Dred_0205 50S ribosomal protein L10; 50S ribosomal protein L10 290574..291110 Desulfotomaculum ruminis DSM 2154 10736651 YP_004543872.1 CDS Desru_0289 NC_015589.1 291164 291544 D KEGG: drm:Dred_0206 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 291164..291544 Desulfotomaculum ruminis DSM 2154 10736652 YP_004543873.1 CDS Desru_0290 NC_015589.1 291872 295396 D KEGG: drm:Dred_0207 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta 291872..295396 Desulfotomaculum ruminis DSM 2154 10736653 YP_004543874.1 CDS Desru_0291 NC_015589.1 295450 299046 D TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: drm:Dred_0208 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 295450..299046 Desulfotomaculum ruminis DSM 2154 10736654 YP_004543875.1 CDS Desru_0292 NC_015589.1 299138 299389 D PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: drm:Dred_0209 ribosomal protein L7ae family protein; 50S ribosomal protein L7Ae/L30e/S12e/Gadd45 299138..299389 Desulfotomaculum ruminis DSM 2154 10736655 YP_004543876.1 CDS Desru_0293 NC_015589.1 299473 299847 D KEGG: drm:Dred_0210 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 299473..299847 Desulfotomaculum ruminis DSM 2154 10736656 YP_004543877.1 CDS Desru_0294 NC_015589.1 299895 300365 D KEGG: drm:Dred_0211 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 299895..300365 Desulfotomaculum ruminis DSM 2154 10736657 YP_004543878.1 CDS Desru_0295 NC_015589.1 300378 302456 D KEGG: drm:Dred_0212 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 300378..302456 Desulfotomaculum ruminis DSM 2154 10736658 YP_004543879.1 CDS Desru_0296 NC_015589.1 302500 303702 D KEGG: drm:Dred_0213 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu 302500..303702 Desulfotomaculum ruminis DSM 2154 10736659 YP_004543880.1 CDS Desru_0297 NC_015589.1 303868 304176 D KEGG: drm:Dred_0214 ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 303868..304176 Desulfotomaculum ruminis DSM 2154 10736660 YP_004543881.1 CDS Desru_0298 NC_015589.1 304251 304880 D KEGG: drm:Dred_0215 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 304251..304880 Desulfotomaculum ruminis DSM 2154 10736661 YP_004543882.1 CDS Desru_0299 NC_015589.1 304916 305536 D PFAM: ribosomal protein L4/L1e; KEGG: drm:Dred_0216 50S ribosomal protein L4; 50S ribosomal protein L4 304916..305536 Desulfotomaculum ruminis DSM 2154 10736662 YP_004543883.1 CDS Desru_0300 NC_015589.1 305536 305823 D PFAM: Ribosomal protein L25/L23; KEGG: drm:Dred_0217 50S ribosomal protein L23; 50S ribosomal protein L25 305536..305823 Desulfotomaculum ruminis DSM 2154 10736663 YP_004543884.1 CDS Desru_0301 NC_015589.1 305838 306662 D KEGG: drm:Dred_0218 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 305838..306662 Desulfotomaculum ruminis DSM 2154 10736664 YP_004543885.1 CDS Desru_0302 NC_015589.1 306737 307021 D KEGG: drm:Dred_0219 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 306737..307021 Desulfotomaculum ruminis DSM 2154 10736665 YP_004543886.1 CDS Desru_0303 NC_015589.1 307041 307382 D KEGG: drm:Dred_0220 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 307041..307382 Desulfotomaculum ruminis DSM 2154 10736666 YP_004543887.1 CDS Desru_0304 NC_015589.1 307387 308052 D TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: drm:Dred_0221 30S ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 307387..308052 Desulfotomaculum ruminis DSM 2154 10736667 YP_004543888.1 CDS Desru_0305 NC_015589.1 308056 308490 D KEGG: drm:Dred_0222 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 308056..308490 Desulfotomaculum ruminis DSM 2154 10736668 YP_004543889.1 CDS Desru_0306 NC_015589.1 308480 308683 D KEGG: drm:Dred_0223 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 308480..308683 Desulfotomaculum ruminis DSM 2154 10736669 YP_004543890.1 CDS Desru_0307 NC_015589.1 308719 308988 D KEGG: drm:Dred_0224 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 308719..308988 Desulfotomaculum ruminis DSM 2154 10736670 YP_004543891.1 CDS Desru_0308 NC_015589.1 309025 309393 D KEGG: drm:Dred_0225 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 309025..309393 Desulfotomaculum ruminis DSM 2154 10736671 YP_004543892.1 CDS Desru_0309 NC_015589.1 309486 309806 D TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: drm:Dred_0226 50S ribosomal protein L24; SMART: KOW domain protein; 50S ribosomal protein L24 309486..309806 Desulfotomaculum ruminis DSM 2154 10736672 YP_004543893.1 CDS Desru_0310 NC_015589.1 309834 310379 D KEGG: drm:Dred_0227 50S ribosomal protein L5; 50S ribosomal protein L5 309834..310379 Desulfotomaculum ruminis DSM 2154 10736673 YP_004543894.1 CDS Desru_0311 NC_015589.1 310404 310589 D PFAM: ribosomal protein S14; KEGG: drm:Dred_0228 ribosomal protein S14; 30S ribosomal protein S14 310404..310589 Desulfotomaculum ruminis DSM 2154 10736674 YP_004543895.1 CDS Desru_0312 NC_015589.1 310611 311009 D PFAM: ribosomal protein S8; KEGG: drm:Dred_0229 30S ribosomal protein S8; 30S ribosomal protein S8 310611..311009 Desulfotomaculum ruminis DSM 2154 10736675 YP_004543896.1 CDS Desru_0313 NC_015589.1 311033 311581 D KEGG: drm:Dred_0230 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 311033..311581 Desulfotomaculum ruminis DSM 2154 10736676 YP_004543897.1 CDS Desru_0314 NC_015589.1 311600 311968 D KEGG: drm:Dred_0231 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 311600..311968 Desulfotomaculum ruminis DSM 2154 10736677 YP_004543898.1 CDS Desru_0315 NC_015589.1 311999 312499 D KEGG: drm:Dred_0232 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; 30S ribosomal protein S5 311999..312499 Desulfotomaculum ruminis DSM 2154 10736678 YP_004543899.1 CDS Desru_0316 NC_015589.1 312512 312691 D KEGG: drm:Dred_0233 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 312512..312691 Desulfotomaculum ruminis DSM 2154 10736679 YP_004543900.1 CDS Desru_0317 NC_015589.1 312705 313145 D TIGRFAM: ribosomal protein L15; KEGG: drm:Dred_0234 50S ribosomal protein L15; 50S ribosomal protein L15 312705..313145 Desulfotomaculum ruminis DSM 2154 10736680 YP_004543901.1 CDS Desru_0318 NC_015589.1 313148 314407 D KEGG: drm:Dred_0235 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 313148..314407 Desulfotomaculum ruminis DSM 2154 10736681 YP_004543902.1 CDS Desru_0319 NC_015589.1 314420 315166 D TIGRFAM: methionine aminopeptidase, type I; KEGG: drm:Dred_0236 methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase type I 314420..315166 Desulfotomaculum ruminis DSM 2154 10736682 YP_004543903.1 CDS Desru_0320 NC_015589.1 315207 315515 D KEGG: drm:Dred_0237 ribosomal protein L14E; 50S ribosomal protein L14 315207..315515 Desulfotomaculum ruminis DSM 2154 10736683 YP_004543904.1 CDS Desru_0321 NC_015589.1 315522 315740 D KEGG: drm:Dred_0238 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 315522..315740 Desulfotomaculum ruminis DSM 2154 10736684 YP_004543905.1 CDS Desru_0322 NC_015589.1 315772 315885 D KEGG: drm:Dred_0239 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 315772..315885 Desulfotomaculum ruminis DSM 2154 10736685 YP_004543906.1 CDS Desru_0323 NC_015589.1 315907 316278 D KEGG: drm:Dred_0240 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 315907..316278 Desulfotomaculum ruminis DSM 2154 10736686 YP_004543907.1 CDS Desru_0324 NC_015589.1 316303 316692 D KEGG: drm:Dred_0241 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 316303..316692 Desulfotomaculum ruminis DSM 2154 10736687 YP_004543908.1 CDS Desru_0325 NC_015589.1 316713 317339 D TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: drm:Dred_0242 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 316713..317339 Desulfotomaculum ruminis DSM 2154 10736688 YP_004543909.1 CDS Desru_0326 NC_015589.1 317388 318335 D TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: drm:Dred_0243 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 317388..318335 Desulfotomaculum ruminis DSM 2154 10736689 YP_004543910.1 CDS Desru_0327 NC_015589.1 318350 318688 D KEGG: drm:Dred_0244 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 318350..318688 Desulfotomaculum ruminis DSM 2154 10736690 YP_004543911.1 CDS Desru_0328 NC_015589.1 318873 319721 D KEGG: drm:Dred_0245 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 318873..319721 Desulfotomaculum ruminis DSM 2154 10736691 YP_004543912.1 CDS Desru_0329 NC_015589.1 319706 320578 D KEGG: drm:Dred_0246 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 319706..320578 Desulfotomaculum ruminis DSM 2154 10736692 YP_004543913.1 CDS Desru_0330 NC_015589.1 320813 321619 D PFAM: cobalt transport protein; KEGG: drm:Dred_0247 cobalt transport protein; cobalt transport protein 320813..321619 Desulfotomaculum ruminis DSM 2154 10736693 YP_004543914.1 CDS Desru_0331 NC_015589.1 321654 322409 D TIGRFAM: tRNA pseudouridine synthase A; KEGG: drm:Dred_0255 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 321654..322409 Desulfotomaculum ruminis DSM 2154 10736694 YP_004543915.1 CDS Desru_0332 NC_015589.1 322644 323348 R KEGG: amt:Amet_4170 hypothetical protein; hypothetical protein complement(322644..323348) Desulfotomaculum ruminis DSM 2154 10736695 YP_004543916.1 CDS Desru_0333 NC_015589.1 323917 325230 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: dae:Dtox_0770 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease complement(323917..325230) Desulfotomaculum ruminis DSM 2154 10736696 YP_004543917.1 CDS Desru_0334 NC_015589.1 325351 325536 D KEGG: bba:Bd3333 hypothetical protein; hypothetical protein 325351..325536 Desulfotomaculum ruminis DSM 2154 10736697 YP_004543918.1 CDS Desru_0335 NC_015589.1 325514 326983 R PFAM: S-layer domain-containing protein; KEGG: dae:Dtox_3478 S-layer domain protein; S-layer protein complement(325514..326983) Desulfotomaculum ruminis DSM 2154 10736698 YP_004543919.1 CDS Desru_0336 NC_015589.1 327125 327544 R KEGG: gct:GC56T3_0630 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; toxin secretion/phage lysis holin complement(327125..327544) Desulfotomaculum ruminis DSM 2154 10736699 YP_004543920.1 CDS Desru_0337 NC_015589.1 327560 328072 R KEGG: cdl:CDR20291_0581 putative transcriptional regulator; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 family RNA polymerase sigma factor complement(327560..328072) Desulfotomaculum ruminis DSM 2154 10736700 YP_004543921.1 CDS Desru_0338 NC_015589.1 328722 329153 D KEGG: drm:Dred_0256 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 328722..329153 Desulfotomaculum ruminis DSM 2154 10736701 YP_004543922.1 CDS Desru_0339 NC_015589.1 329186 329578 D PFAM: ribosomal protein S9; KEGG: drm:Dred_0257 30S ribosomal protein S9; 30S ribosomal protein S9 329186..329578 Desulfotomaculum ruminis DSM 2154 10736702 YP_004543923.1 CDS Desru_0340 NC_015589.1 329650 331797 D TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: drm:Dred_1261 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ 329650..331797 Desulfotomaculum ruminis DSM 2154 10736703 YP_004543924.1 CDS Desru_0341 NC_015589.1 331948 332763 D KEGG: drm:Dred_0265 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 331948..332763 Desulfotomaculum ruminis DSM 2154 10736704 YP_004543925.1 CDS Desru_0342 NC_015589.1 332897 334069 D KEGG: drm:Dred_0266 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; cysteine desulfurase 332897..334069 Desulfotomaculum ruminis DSM 2154 10736705 YP_004543926.1 CDS Desru_0343 NC_015589.1 334188 334385 R KEGG: drm:Dred_0267 flagellar biosynthesis; hypothetical protein complement(334188..334385) Desulfotomaculum ruminis DSM 2154 10736706 YP_004543927.1 CDS Desru_0344 NC_015589.1 334388 334972 R KEGG: drm:Dred_0268 hypothetical protein; hypothetical protein complement(334388..334972) Desulfotomaculum ruminis DSM 2154 10736707 YP_004543928.1 CDS Desru_0345 NC_015589.1 335229 336632 D PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: drm:Dred_0269 hypothetical protein; AMMECR1 domain-containing protein 335229..336632 Desulfotomaculum ruminis DSM 2154 10736708 YP_004543929.1 CDS Desru_0346 NC_015589.1 336679 337665 D PFAM: Radical SAM domain protein; KEGG: drm:Dred_0270 radical SAM domain-containing protein; radical SAM protein 336679..337665 Desulfotomaculum ruminis DSM 2154 10736709 YP_004543930.1 CDS Desru_0347 NC_015589.1 337811 338851 D TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: drm:Dred_0271 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 337811..338851 Desulfotomaculum ruminis DSM 2154 10736710 YP_004543931.1 CDS Desru_0348 NC_015589.1 338864 340084 D TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: drm:Dred_0272 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 338864..340084 Desulfotomaculum ruminis DSM 2154 10736711 YP_004543932.1 CDS Desru_0349 NC_015589.1 340109 340966 D TIGRFAM: acetylglutamate kinase; KEGG: drm:Dred_0273 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 340109..340966 Desulfotomaculum ruminis DSM 2154 10736712 YP_004543933.1 CDS Desru_0350 NC_015589.1 341011 342210 D TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: drm:Dred_0274 acetylornithine aminotransferase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 341011..342210 Desulfotomaculum ruminis DSM 2154 10736713 YP_004543934.1 CDS Desru_0351 NC_015589.1 342247 345471 D KEGG: drm:Dred_0275 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 342247..345471 Desulfotomaculum ruminis DSM 2154 10736714 YP_004543935.1 CDS Desru_0352 NC_015589.1 345498 346439 D TIGRFAM: ornithine carbamoyltransferase; KEGG: drm:Dred_0276 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 345498..346439 Desulfotomaculum ruminis DSM 2154 10736715 YP_004543936.1 CDS Desru_0353 NC_015589.1 346573 347778 D TIGRFAM: argininosuccinate synthase; KEGG: drm:Dred_0277 argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase 346573..347778 Desulfotomaculum ruminis DSM 2154 10736716 YP_004543937.1 CDS Desru_0354 NC_015589.1 348000 349379 D KEGG: drm:Dred_0278 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 348000..349379 Desulfotomaculum ruminis DSM 2154 10736717 YP_004543938.1 CDS Desru_0355 NC_015589.1 349767 350888 D KEGG: drm:Dred_0279 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; metal-dependent phosphohydrolase HD sub domain-containing protein 349767..350888 Desulfotomaculum ruminis DSM 2154 10736718 YP_004543939.1 CDS Desru_0356 NC_015589.1 351287 352945 D TIGRFAM: dihydroxy-acid dehydratase; KEGG: drm:Dred_0280 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 351287..352945 Desulfotomaculum ruminis DSM 2154 10736719 YP_004543940.1 CDS Desru_0357 NC_015589.1 352992 354653 D KEGG: drm:Dred_0281 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit biosynthetic type 352992..354653 Desulfotomaculum ruminis DSM 2154 10736720 YP_004543941.1 CDS Desru_0358 NC_015589.1 354669 355181 D TIGRFAM: acetolactate synthase, small subunit; KEGG: drm:Dred_0282 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit 354669..355181 Desulfotomaculum ruminis DSM 2154 10736721 YP_004543942.1 CDS Desru_0359 NC_015589.1 355184 356176 D TIGRFAM: ketol-acid reductoisomerase; KEGG: drm:Dred_0283 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 355184..356176 Desulfotomaculum ruminis DSM 2154 10736722 YP_004543943.1 CDS Desru_0360 NC_015589.1 356352 358013 D KEGG: drm:Dred_0284 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit biosynthetic type 356352..358013 Desulfotomaculum ruminis DSM 2154 10736723 YP_004543944.1 CDS Desru_0361 NC_015589.1 358062 359579 D KEGG: drm:Dred_0285 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 358062..359579 Desulfotomaculum ruminis DSM 2154 10736724 YP_004543945.1 CDS Desru_0362 NC_015589.1 359724 360986 D KEGG: drm:Dred_0286 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase large subunit 359724..360986 Desulfotomaculum ruminis DSM 2154 10736725 YP_004543946.1 CDS Desru_0363 NC_015589.1 360986 361483 D KEGG: drm:Dred_0287 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit 360986..361483 Desulfotomaculum ruminis DSM 2154 10736726 YP_004543947.1 CDS Desru_0364 NC_015589.1 361476 362546 D TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: drm:Dred_0288 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 361476..362546 Desulfotomaculum ruminis DSM 2154 10736727 YP_004543948.1 CDS Desru_0365 NC_015589.1 362578 364170 D KEGG: drm:Dred_0289 putative alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain-containing protein; pyruvate carboxyltransferase; 2-isopropylmalate synthase 362578..364170 Desulfotomaculum ruminis DSM 2154 10736728 YP_004543949.1 CDS Desru_0366 NC_015589.1 364368 366101 D KEGG: pth:PTH_1557 hypothetical protein; hypothetical protein 364368..366101 Desulfotomaculum ruminis DSM 2154 10736729 YP_004543950.1 CDS Desru_0367 NC_015589.1 366296 367120 D PFAM: protein of unknown function DUF147; KEGG: drm:Dred_0292 hypothetical protein; hypothetical protein 366296..367120 Desulfotomaculum ruminis DSM 2154 10736730 YP_004543951.1 CDS Desru_0368 NC_015589.1 367117 368085 D PFAM: YbbR family protein; KEGG: drm:Dred_0293 YbbR family protein; hypothetical protein 367117..368085 Desulfotomaculum ruminis DSM 2154 10736731 YP_004543952.1 CDS Desru_0369 NC_015589.1 368284 369618 D KEGG: drm:Dred_0294 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 368284..369618 Desulfotomaculum ruminis DSM 2154 10736732 YP_004543953.1 CDS Desru_0370 NC_015589.1 369955 371784 D KEGG: drm:Dred_0295 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; glucosamine/fructose-6-phosphate aminotransferase 369955..371784 Desulfotomaculum ruminis DSM 2154 10736733 YP_004543954.1 CDS Desru_0371 NC_015589.1 372588 373487 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_1810 DNA methylase N-4/N-6 domain-containing protein; DNA methylase N-4/N-6 domain-containing protein 372588..373487 Desulfotomaculum ruminis DSM 2154 10736734 YP_004543955.1 CDS Desru_0372 NC_015589.1 373509 373994 D PFAM: Restriction endonuclease BglII; KEGG: pde:Pden_3839 hypothetical protein; Restriction endonuclease BglII 373509..373994 Desulfotomaculum ruminis DSM 2154 10736735 YP_004543956.1 CDS Desru_0373 NC_015589.1 373994 375298 D KEGG: pde:Pden_3840 hypothetical protein; hypothetical protein 373994..375298 Desulfotomaculum ruminis DSM 2154 10736736 YP_004543957.1 CDS Desru_0374 NC_015589.1 375276 377075 D KEGG: pde:Pden_3841 helicase domain-containing protein; PFAM: helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; helicase domain-containing protein 375276..377075 Desulfotomaculum ruminis DSM 2154 10736737 YP_004543958.1 CDS Desru_0375 NC_015589.1 377068 377937 D KEGG: pde:Pden_3842 hypothetical protein; hypothetical protein 377068..377937 Desulfotomaculum ruminis DSM 2154 10736738 YP_004543959.1 CDS Desru_0376 NC_015589.1 378191 378352 D KEGG: nvi:100118076 hypothetical protein LOC100118076; hypothetical protein 378191..378352 Desulfotomaculum ruminis DSM 2154 10736739 YP_004543960.1 CDS Desru_0379 NC_015589.1 379638 380186 R PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cno:NT01CX_1083 rubrerythrin; rubrerythrin complement(379638..380186) Desulfotomaculum ruminis DSM 2154 10736742 YP_004543961.1 CDS Desru_0380 NC_015589.1 380204 380635 R PFAM: ferric-uptake regulator; KEGG: lba:Lebu_2013 ferric uptake regulator, Fur family; ferric-uptake regulator complement(380204..380635) Desulfotomaculum ruminis DSM 2154 10736743 YP_004543962.1 CDS Desru_0382 NC_015589.1 381261 383126 R KEGG: drm:Dred_1557 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein complement(381261..383126) Desulfotomaculum ruminis DSM 2154 10736745 YP_004543963.1 CDS Desru_0383 NC_015589.1 383655 384935 D KEGG: dhd:Dhaf_0271 beta-lactamase domain protein; beta-lactamase domain-containing protein 383655..384935 Desulfotomaculum ruminis DSM 2154 10736746 YP_004543964.1 CDS Desru_0384 NC_015589.1 385090 385806 R PFAM: 2-phosphosulfolactate phosphatase; KEGG: cno:NT01CX_0616 2-phosphosulfolactate phosphatase; 2-phosphosulfolactate phosphatase complement(385090..385806) Desulfotomaculum ruminis DSM 2154 10736747 YP_004543965.1 CDS Desru_0385 NC_015589.1 385969 386187 R KEGG: drm:Dred_3185 putative dissimilatory sulfite reductase subunit D; putative dissimilatory sulfite reductase subunit D complement(385969..386187) Desulfotomaculum ruminis DSM 2154 10736748 YP_004543966.1 CDS Desru_0386 NC_015589.1 386298 387362 R TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; sulfite reductase dissimilatory-type subunit beta complement(386298..387362) Desulfotomaculum ruminis DSM 2154 10736749 YP_004543967.1 CDS Desru_0387 NC_015589.1 387396 388592 R TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: drm:Dred_3187 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; sulfite reductase dissimilatory-type subunit alpha complement(387396..388592) Desulfotomaculum ruminis DSM 2154 10736750 YP_004543968.1 CDS Desru_0388 NC_015589.1 388934 390268 D KEGG: clj:CLJU_c08850 putative transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; regulatory protein GntR 388934..390268 Desulfotomaculum ruminis DSM 2154 10736751 YP_004543969.1 CDS Desru_0389 NC_015589.1 390467 391945 R KEGG: dae:Dtox_1612 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(390467..391945) Desulfotomaculum ruminis DSM 2154 10736752 YP_004543970.1 CDS Desru_0390 NC_015589.1 392327 392872 R PFAM: nitroreductase; KEGG: hmo:HM1_1491 NADH dehydrogenase/nad(p)h nitroreductase, putative; nitroreductase complement(392327..392872) Desulfotomaculum ruminis DSM 2154 10736753 YP_004543971.1 CDS Desru_0391 NC_015589.1 393001 393267 R KEGG: ckr:CKR_2566 hypothetical protein; hypothetical protein complement(393001..393267) Desulfotomaculum ruminis DSM 2154 10736754 YP_004543972.1 CDS Desru_0395 NC_015589.1 395961 397100 D PFAM: metallophosphoesterase; KEGG: tjr:TherJR_2869 metallophosphoesterase; metallophosphoesterase 395961..397100 Desulfotomaculum ruminis DSM 2154 10736758 YP_004543973.1 CDS Desru_0396 NC_015589.1 397369 397968 D KEGG: clj:CLJU_c26490 putative RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 family RNA polymerase sigma factor 397369..397968 Desulfotomaculum ruminis DSM 2154 10736759 YP_004543974.1 CDS Desru_0397 NC_015589.1 397961 398818 D KEGG: cbe:Cbei_0314 hypothetical protein; hypothetical protein 397961..398818 Desulfotomaculum ruminis DSM 2154 10736760 YP_004543975.1 CDS Desru_0399 NC_015589.1 400160 400381 R KEGG: bss:BSUW23_10025 putative transcriptional regualtor; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(400160..400381) Desulfotomaculum ruminis DSM 2154 10736762 YP_004543976.1 CDS Desru_0400 NC_015589.1 400392 400865 R KEGG: cbe:Cbei_3032 uncharacterized membrane protein; hypothetical protein complement(400392..400865) Desulfotomaculum ruminis DSM 2154 10736763 YP_004543977.1 CDS Desru_0401 NC_015589.1 401146 401718 R KEGG: bcl:ABC3304 transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(401146..401718) Desulfotomaculum ruminis DSM 2154 10736764 YP_004543978.1 CDS Desru_0402 NC_015589.1 401903 402598 D PFAM: AzlC family protein; KEGG: afl:Aflv_0263 branched-chain amino acid permease (azaleucine resistance); AzlC family protein 401903..402598 Desulfotomaculum ruminis DSM 2154 10736765 YP_004543979.1 CDS Desru_0403 NC_015589.1 402591 402908 D PFAM: branched-chain amino acid transport; KEGG: afl:Aflv_0264 predicted membrane protein; branched-chain amino acid transport 402591..402908 Desulfotomaculum ruminis DSM 2154 10736766 YP_004543980.1 CDS Desru_0404 NC_015589.1 403101 403763 D KEGG: cce:Ccel_1064 hypothetical protein; hypothetical protein 403101..403763 Desulfotomaculum ruminis DSM 2154 10736767 YP_004543981.1 CDS Desru_0405 NC_015589.1 404104 404907 D PFAM: protein of unknown function DUF990; KEGG: cce:Ccel_2521 protein of unknown function DUF990; hypothetical protein 404104..404907 Desulfotomaculum ruminis DSM 2154 10736768 YP_004543982.1 CDS Desru_0406 NC_015589.1 404911 405723 D PFAM: protein of unknown function DUF990; KEGG: sth:STH3203 hypothetical protein; hypothetical protein 404911..405723 Desulfotomaculum ruminis DSM 2154 10736769 YP_004543983.1 CDS Desru_0407 NC_015589.1 405738 406736 D KEGG: sth:STH2664 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 405738..406736 Desulfotomaculum ruminis DSM 2154 10736770 YP_004543984.1 CDS Desru_0408 NC_015589.1 406774 407682 R KEGG: drm:Dred_2781 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(406774..407682) Desulfotomaculum ruminis DSM 2154 10736771 YP_004543985.1 CDS Desru_0409 NC_015589.1 408011 408730 D KEGG: sth:STH2007 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 408011..408730 Desulfotomaculum ruminis DSM 2154 10736772 YP_004543986.1 CDS Desru_0410 NC_015589.1 408711 410132 D KEGG: gct:GC56T3_1122 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 408711..410132 Desulfotomaculum ruminis DSM 2154 10736773 YP_004543987.1 CDS Desru_0411 NC_015589.1 410202 411584 D PFAM: WD40-like beta Propeller containing protein; KEGG: pth:PTH_0765 signaling protein; WD40-like beta Propeller containing protein 410202..411584 Desulfotomaculum ruminis DSM 2154 10736774 YP_004543988.1 CDS Desru_0412 NC_015589.1 411852 412073 D KEGG: smm:Smp_076500 dystrophin-like protein; hypothetical protein 411852..412073 Desulfotomaculum ruminis DSM 2154 10736775 YP_004543989.1 CDS Desru_0413 NC_015589.1 412120 412602 D PFAM: Thioredoxin domain-containing protein; KEGG: dsy:DSY0659 hypothetical protein; thioredoxin domain-containing protein 412120..412602 Desulfotomaculum ruminis DSM 2154 10736776 YP_004543990.1 CDS Desru_0414 NC_015589.1 413099 415039 D KEGG: aar:Acear_0225 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein 413099..415039 Desulfotomaculum ruminis DSM 2154 10736777 YP_004543991.1 CDS Desru_0415 NC_015589.1 415432 416832 D PFAM: major facilitator superfamily MFS_1; KEGG: dds:Ddes_1414 major facilitator superfamily MFS_1; major facilitator superfamily protein 415432..416832 Desulfotomaculum ruminis DSM 2154 10736778 YP_004543992.1 CDS Desru_0416 NC_015589.1 417027 417926 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dsy:DSY0730 hypothetical protein; hypothetical protein 417027..417926 Desulfotomaculum ruminis DSM 2154 10736779 YP_004543993.1 CDS Desru_0417 NC_015589.1 418088 418987 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dhd:Dhaf_4911 transcriptional regulator, LysR family; regulatory protein LysR 418088..418987 Desulfotomaculum ruminis DSM 2154 10736780 YP_004543994.1 CDS Desru_0418 NC_015589.1 419577 419792 D KEGG: mpe:MYPE5360 hypothetical protein; hypothetical protein 419577..419792 Desulfotomaculum ruminis DSM 2154 10736781 YP_004543995.1 CDS Desru_0419 NC_015589.1 419956 420603 R KEGG: dae:Dtox_4206 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(419956..420603) Desulfotomaculum ruminis DSM 2154 10736782 YP_004543996.1 CDS Desru_0420 NC_015589.1 421110 422342 D KEGG: dae:Dtox_3501 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein 421110..422342 Desulfotomaculum ruminis DSM 2154 10736783 YP_004543997.1 CDS Desru_0421 NC_015589.1 422402 422941 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: dae:Dtox_3499 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein MobB 422402..422941 Desulfotomaculum ruminis DSM 2154 10736784 YP_004543998.1 CDS Desru_0422 NC_015589.1 423123 423737 D PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: drm:Dred_1113 formate dehydrogenase; molybdopterin oxidoreductase Fe4S4 region 423123..423737 Desulfotomaculum ruminis DSM 2154 10736785 YP_004543999.1 CDS Desru_0423 NC_015589.1 423786 426215 D KEGG: drm:Dred_1114 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; nitrate reductase 423786..426215 Desulfotomaculum ruminis DSM 2154 10736786 YP_004544000.1 CDS Desru_0424 NC_015589.1 426231 427043 D KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 426231..427043 Desulfotomaculum ruminis DSM 2154 10736787 YP_004544001.1 CDS Desru_0425 NC_015589.1 427089 428252 D PFAM: Polysulphide reductase NrfD; KEGG: drm:Dred_1116 polysulphide reductase, NrfD; polysulfide reductase NrfD 427089..428252 Desulfotomaculum ruminis DSM 2154 10736788 YP_004544002.1 CDS Desru_0426 NC_015589.1 428277 429086 D PFAM: formate dehydrogenase accessory protein; KEGG: drm:Dred_1117 hypothetical protein; formate dehydrogenase accessory protein 428277..429086 Desulfotomaculum ruminis DSM 2154 10736789 YP_004544003.1 CDS Desru_0428 NC_015589.1 429711 430907 D PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_0707 major facilitator transporter; major facilitator superfamily protein 429711..430907 Desulfotomaculum ruminis DSM 2154 10736791 YP_004544004.1 CDS Desru_0429 NC_015589.1 430901 431101 D KEGG: aco:Amico_0321 protein of unknown function DUF2196; TIGRFAM: Protein of unknown function DUF2196; PFAM: Protein of unknown function DUF2196; hypothetical protein 430901..431101 Desulfotomaculum ruminis DSM 2154 10736792 YP_004544005.1 CDS Desru_0430 NC_015589.1 431122 431724 R PFAM: regulatory protein TetR; KEGG: clj:CLJU_c10510 putative transcriptional regulator; regulatory protein TetR complement(431122..431724) Desulfotomaculum ruminis DSM 2154 10736793 YP_004544006.1 CDS Desru_0431 NC_015589.1 431821 436041 R KEGG: tjr:TherJR_0153 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase complement(431821..436041) Desulfotomaculum ruminis DSM 2154 10736794 YP_004544007.1 CDS Desru_0432 NC_015589.1 436414 437907 D KEGG: dsy:DSY4404 hypothetical protein; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase 436414..437907 Desulfotomaculum ruminis DSM 2154 10736795 YP_004544008.1 CDS Desru_0434 NC_015589.1 439724 440965 D PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_0977 major facilitator transporter; major facilitator superfamily protein 439724..440965 Desulfotomaculum ruminis DSM 2154 10736797 YP_004544009.1 CDS Desru_0435 NC_015589.1 440984 441451 D KEGG: drm:Dred_3224 membrane protein; membrane protein 440984..441451 Desulfotomaculum ruminis DSM 2154 10736798 YP_004544010.1 CDS Desru_0436 NC_015589.1 441709 441924 R PFAM: SirA-like domain-containing protein; KEGG: pth:PTH_0551 redox protein; SirA-like domain-containing protein complement(441709..441924) Desulfotomaculum ruminis DSM 2154 10736799 YP_004544011.1 CDS Desru_0437 NC_015589.1 441884 442987 R KEGG: dae:Dtox_1621 hypothetical protein; hypothetical protein complement(441884..442987) Desulfotomaculum ruminis DSM 2154 10736800 YP_004544012.1 CDS Desru_0438 NC_015589.1 443328 444230 R KEGG: ctc:CTC00846 metallo cofactor biosynthesis protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(443328..444230) Desulfotomaculum ruminis DSM 2154 10736801 YP_004544013.1 CDS Desru_0439 NC_015589.1 444240 445511 R KEGG: ctc:CTC00845 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(444240..445511) Desulfotomaculum ruminis DSM 2154 10736802 YP_004544014.1 CDS Desru_0440 NC_015589.1 445508 445972 R KEGG: bwe:BcerKBAB4_5634 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(445508..445972) Desulfotomaculum ruminis DSM 2154 10736803 YP_004544015.1 CDS Desru_0441 NC_015589.1 446257 447912 R PFAM: peptidase M20; KEGG: toc:Toce_1998 peptidase M20; peptidase M20 complement(446257..447912) Desulfotomaculum ruminis DSM 2154 10736804 YP_004544016.1 CDS Desru_0442 NC_015589.1 448401 449204 D KEGG: drm:Dred_0743 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein 448401..449204 Desulfotomaculum ruminis DSM 2154 10736805 YP_004544017.1 CDS Desru_0443 NC_015589.1 449256 449939 D KEGG: drm:Dred_0742 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 449256..449939 Desulfotomaculum ruminis DSM 2154 10736806 YP_004544018.1 CDS Desru_0444 NC_015589.1 449936 450661 D KEGG: bcy:Bcer98_0345 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 449936..450661 Desulfotomaculum ruminis DSM 2154 10736807 YP_004544019.1 CDS Desru_0445 NC_015589.1 450831 451418 D KEGG: drm:Dred_2811 response regulator receiver/ANTAR domain-containing protein; PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; response regulator receiver 450831..451418 Desulfotomaculum ruminis DSM 2154 10736808 YP_004544020.1 CDS Desru_0446 NC_015589.1 451605 452903 D PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: drm:Dred_2810 glutamate--ammonia ligase; glutamine synthetase 451605..452903 Desulfotomaculum ruminis DSM 2154 10736809 YP_004544021.1 CDS Desru_0447 NC_015589.1 452975 454552 D KEGG: drm:Dred_2809 glutamate synthase-like protein; glutamate synthase-like protein 452975..454552 Desulfotomaculum ruminis DSM 2154 10736810 YP_004544022.1 CDS Desru_0448 NC_015589.1 454934 455815 D KEGG: sat:SYN_00075 cysteinyl-tRNA synthetase; TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; cysteine synthase 454934..455815 Desulfotomaculum ruminis DSM 2154 10736811 YP_004544023.1 CDS Desru_0449 NC_015589.1 455743 456162 R KEGG: ani:AN3325.2 hypothetical protein; hypothetical protein complement(455743..456162) Desulfotomaculum ruminis DSM 2154 10736812 YP_004544024.1 CDS Desru_0450 NC_015589.1 456355 456825 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: amt:Amet_1540 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(456355..456825) Desulfotomaculum ruminis DSM 2154 10736813 YP_004544025.1 CDS Desru_0451 NC_015589.1 457016 458251 R PFAM: VRR-NUC domain-containing protein; KEGG: cnb:CNBM2120 hypothetical protein; VRR-NUC domain-containing protein complement(457016..458251) Desulfotomaculum ruminis DSM 2154 10736814 YP_004544026.1 CDS Desru_0454 NC_015589.1 460062 460454 D KEGG: dae:Dtox_3545 small membrane protein; small membrane protein 460062..460454 Desulfotomaculum ruminis DSM 2154 10736817 YP_004544027.1 CDS Desru_0455 NC_015589.1 460776 461777 D KEGG: cbf:CLI_1141 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 460776..461777 Desulfotomaculum ruminis DSM 2154 10736818 YP_004544028.1 CDS Desru_0456 NC_015589.1 462045 462797 D KEGG: tit:Thit_1060 peptidase A24A domain protein; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; prepilin peptidase 462045..462797 Desulfotomaculum ruminis DSM 2154 10736819 YP_004544029.1 CDS Desru_0457 NC_015589.1 462868 463077 D KEGG: dau:Daud_0720 hypothetical protein; hypothetical protein 462868..463077 Desulfotomaculum ruminis DSM 2154 10736820 YP_004544030.1 CDS Desru_0458 NC_015589.1 463124 463291 D hypothetical protein 463124..463291 Desulfotomaculum ruminis DSM 2154 10736821 YP_004544031.1 CDS Desru_0459 NC_015589.1 463312 464259 D KEGG: pca:Pcar_0865 hypothetical protein; hypothetical protein 463312..464259 Desulfotomaculum ruminis DSM 2154 10736822 YP_004544032.1 CDS Desru_0460 NC_015589.1 464362 465555 D KEGG: dae:Dtox_3371 O-antigen polymerase; O-antigen polymerase 464362..465555 Desulfotomaculum ruminis DSM 2154 10736823 YP_004544033.1 CDS Desru_0461 NC_015589.1 465566 467104 D KEGG: dae:Dtox_2669 hypothetical protein; hypothetical protein 465566..467104 Desulfotomaculum ruminis DSM 2154 10736824 YP_004544034.1 CDS Desru_0462 NC_015589.1 467148 468635 D KEGG: dae:Dtox_2668 fimbrial assembly family protein; fimbrial assembly family protein 467148..468635 Desulfotomaculum ruminis DSM 2154 10736825 YP_004544035.1 CDS Desru_0463 NC_015589.1 468666 469394 D KEGG: dae:Dtox_2667 hypothetical protein; hypothetical protein 468666..469394 Desulfotomaculum ruminis DSM 2154 10736826 YP_004544036.1 CDS Desru_0464 NC_015589.1 469408 470508 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: dae:Dtox_2666 twitching motility protein; SMART: AAA ATPase; twitching motility protein 469408..470508 Desulfotomaculum ruminis DSM 2154 10736827 YP_004544037.1 CDS Desru_0465 NC_015589.1 470522 472162 D KEGG: dae:Dtox_2665 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; type II secretion system protein E 470522..472162 Desulfotomaculum ruminis DSM 2154 10736828 YP_004544038.1 CDS Desru_0466 NC_015589.1 472197 473048 D KEGG: mpi:Mpet_0661 hypothetical protein; hypothetical protein 472197..473048 Desulfotomaculum ruminis DSM 2154 10736829 YP_004544039.1 CDS Desru_0467 NC_015589.1 473048 474289 D PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2664 type II secretion system protein; type II secretion system F domain-containing protein 473048..474289 Desulfotomaculum ruminis DSM 2154 10736830 YP_004544040.1 CDS Desru_0468 NC_015589.1 474462 474869 D KEGG: csc:Csac_1494 hypothetical protein; hypothetical protein 474462..474869 Desulfotomaculum ruminis DSM 2154 10736831 YP_004544041.1 CDS Desru_0469 NC_015589.1 474901 475377 D KEGG: dhd:Dhaf_2879 hypothetical protein; hypothetical protein 474901..475377 Desulfotomaculum ruminis DSM 2154 10736832 YP_004544042.1 CDS Desru_0470 NC_015589.1 475380 476111 D SMART: AAA ATPase; KEGG: bbe:BBR47_42920 hypothetical protein; AAA ATPase 475380..476111 Desulfotomaculum ruminis DSM 2154 10736833 YP_004544043.1 CDS Desru_0471 NC_015589.1 476380 477582 D PFAM: iron-containing alcohol dehydrogenase; KEGG: mta:Moth_1911 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 476380..477582 Desulfotomaculum ruminis DSM 2154 10736834 YP_004544044.1 CDS Desru_0472 NC_015589.1 477769 478608 R PFAM: amidohydrolase 2; KEGG: drm:Dred_2759 amidohydrolase 2; amidohydrolase 2 complement(477769..478608) Desulfotomaculum ruminis DSM 2154 10736835 YP_004544045.1 CDS Desru_0473 NC_015589.1 478858 479580 D KEGG: drm:Dred_2758 UbiC transcription regulator-associated domain-containing protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein 478858..479580 Desulfotomaculum ruminis DSM 2154 10736836 YP_004544046.1 CDS Desru_0474 NC_015589.1 480076 481386 D PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_5948 major facilitator transporter; major facilitator superfamily protein 480076..481386 Desulfotomaculum ruminis DSM 2154 10736837 YP_004544047.1 CDS Desru_0475 NC_015589.1 481579 484065 D KEGG: drm:Dred_2750 formate C-acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; Formate C-acetyltransferase 481579..484065 Desulfotomaculum ruminis DSM 2154 10736838 YP_004544048.1 CDS Desru_0476 NC_015589.1 484141 485082 D TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: drm:Dred_2752 glycyl-radical activating family protein; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 484141..485082 Desulfotomaculum ruminis DSM 2154 10736839 YP_004544049.1 CDS Desru_0477 NC_015589.1 485079 485429 D KEGG: drm:Dred_1233 hypothetical protein; hypothetical protein 485079..485429 Desulfotomaculum ruminis DSM 2154 10736840 YP_004544050.1 CDS Desru_0478 NC_015589.1 485741 486559 D PFAM: protein of unknown function DUF81; KEGG: drm:Dred_2748 hypothetical protein; hypothetical protein 485741..486559 Desulfotomaculum ruminis DSM 2154 10736841 YP_004544051.1 CDS Desru_0479 NC_015589.1 486753 487703 R PFAM: Bile acid:sodium symporter; KEGG: bmq:BMQ_3984 sodium bile acid symporter family; bile acid:sodium symporter complement(486753..487703) Desulfotomaculum ruminis DSM 2154 10736842 YP_004544052.1 CDS Desru_0480 NC_015589.1 487958 489409 R KEGG: amt:Amet_1507 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein complement(487958..489409) Desulfotomaculum ruminis DSM 2154 10736843 YP_004544053.1 CDS Desru_0481 NC_015589.1 489450 490133 R KEGG: tjr:TherJR_2684 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(489450..490133) Desulfotomaculum ruminis DSM 2154 10736844 YP_004544054.1 CDS Desru_0482 NC_015589.1 490255 490716 R PFAM: ubiquitin-associated- domain-containing protein; KEGG: drm:Dred_1536 ubiquitin-associated domain-containing protein; ubiquitin-associated- domain-containing protein complement(490255..490716) Desulfotomaculum ruminis DSM 2154 10736845 YP_004544055.1 CDS Desru_0483 NC_015589.1 490832 491986 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: drm:Dred_1269 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(490832..491986) Desulfotomaculum ruminis DSM 2154 10736846 YP_004544056.1 CDS Desru_0484 NC_015589.1 492133 493881 D KEGG: amt:Amet_4666 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; sigma-54 factor interaction domain-containing protein 492133..493881 Desulfotomaculum ruminis DSM 2154 10736847 YP_004544057.1 CDS Desru_0485 NC_015589.1 494023 495330 D KEGG: cdl:CDR20291_3092 hypothetical protein; hypothetical protein 494023..495330 Desulfotomaculum ruminis DSM 2154 10736848 YP_004544058.1 CDS Desru_0486 NC_015589.1 495331 496227 D KEGG: csc:Csac_0632 hypothetical protein; hypothetical protein 495331..496227 Desulfotomaculum ruminis DSM 2154 10736849 YP_004544059.1 CDS Desru_0487 NC_015589.1 496683 497903 D PFAM: Extracellular ligand-binding receptor; KEGG: pth:PTH_0458 ABC-type branched-chain amino acid transport systems, periplasmic component; extracellular ligand-binding receptor 496683..497903 Desulfotomaculum ruminis DSM 2154 10736850 YP_004544060.1 CDS Desru_0488 NC_015589.1 497972 498847 D PFAM: inner-membrane translocator; KEGG: pth:PTH_0459 branched-chain amino acid ABC-type transport system, permease components; inner-membrane translocator 497972..498847 Desulfotomaculum ruminis DSM 2154 10736851 YP_004544061.1 CDS Desru_0489 NC_015589.1 498854 499831 D PFAM: inner-membrane translocator; KEGG: pth:PTH_0460 ABC-type branched-chain amino acid transport system, permeasecomponent; inner-membrane translocator 498854..499831 Desulfotomaculum ruminis DSM 2154 10736852 YP_004544062.1 CDS Desru_0490 NC_015589.1 499809 500534 D KEGG: pth:PTH_0461 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 499809..500534 Desulfotomaculum ruminis DSM 2154 10736853 YP_004544063.1 CDS Desru_0491 NC_015589.1 500521 501225 D KEGG: pth:PTH_0462 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 500521..501225 Desulfotomaculum ruminis DSM 2154 10736854 YP_004544064.1 CDS Desru_0492 NC_015589.1 501446 503701 R KEGG: ttm:Tthe_0084 hypothetical protein; hypothetical protein complement(501446..503701) Desulfotomaculum ruminis DSM 2154 10736855 YP_004544065.1 CDS Desru_0493 NC_015589.1 503884 505446 D KEGG: hmo:HM1_3016 L-lactate permease family protein, putative; L-lactate permease family protein 503884..505446 Desulfotomaculum ruminis DSM 2154 10736856 YP_004544066.1 CDS Desru_0494 NC_015589.1 505484 506125 R PFAM: SNARE associated Golgi protein; KEGG: lmh:LMHCC_1069 DedA family protein; hypothetical protein complement(505484..506125) Desulfotomaculum ruminis DSM 2154 10736857 YP_004544067.1 CDS Desru_0495 NC_015589.1 506345 507289 D KEGG: drm:Dred_0621 transporter DMT superfamily protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; RarD protein DMT superfamily transporter 506345..507289 Desulfotomaculum ruminis DSM 2154 10736858 YP_004544068.1 CDS Desru_0496 NC_015589.1 507498 508196 D KEGG: drm:Dred_2981 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 507498..508196 Desulfotomaculum ruminis DSM 2154 10736859 YP_004544069.1 CDS Desru_0497 NC_015589.1 508183 509652 D KEGG: drm:Dred_2980 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 508183..509652 Desulfotomaculum ruminis DSM 2154 10736860 YP_004544070.1 CDS Desru_0498 NC_015589.1 509804 510208 D KEGG: chy:CHY_2463 hypothetical protein; hypothetical protein 509804..510208 Desulfotomaculum ruminis DSM 2154 10736861 YP_004544071.1 CDS Desru_0499 NC_015589.1 510209 511549 D KEGG: dhd:Dhaf_2488 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 510209..511549 Desulfotomaculum ruminis DSM 2154 10736862 YP_004544072.1 CDS Desru_0500 NC_015589.1 511720 512046 D KEGG: drm:Dred_0561 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 511720..512046 Desulfotomaculum ruminis DSM 2154 10736863 YP_004544073.1 CDS Desru_0501 NC_015589.1 512218 514626 R PFAM: protein of unknown function DUF214; KEGG: cdl:CDR20291_0863 hypothetical protein; hypothetical protein complement(512218..514626) Desulfotomaculum ruminis DSM 2154 10736864 YP_004544074.1 CDS Desru_0502 NC_015589.1 514623 515306 R KEGG: cdl:CDR20291_0862 predicted abc transporter, atpase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(514623..515306) Desulfotomaculum ruminis DSM 2154 10736865 YP_004544075.1 CDS Desru_0503 NC_015589.1 515373 516617 R KEGG: cdl:CDR20291_0861 sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein complement(515373..516617) Desulfotomaculum ruminis DSM 2154 10736866 YP_004544076.1 CDS Desru_0504 NC_015589.1 516628 517317 R KEGG: cdl:CDR20291_0860 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(516628..517317) Desulfotomaculum ruminis DSM 2154 10736867 YP_004544077.1 CDS Desru_0505 NC_015589.1 517969 518379 D KEGG: drm:Dred_3305 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 517969..518379 Desulfotomaculum ruminis DSM 2154 10736868 YP_004544078.1 CDS Desru_0506 NC_015589.1 518560 519996 D PFAM: HI0933 family protein; KEGG: drm:Dred_0425 hypothetical protein; hypothetical protein 518560..519996 Desulfotomaculum ruminis DSM 2154 10736869 YP_004544079.1 CDS Desru_0507 NC_015589.1 520139 521086 D KEGG: bmq:BMQ_1939 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; magnesium and cobalt transport protein CorA 520139..521086 Desulfotomaculum ruminis DSM 2154 10736870 YP_004544080.1 CDS Desru_0508 NC_015589.1 521220 522122 D TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: cdf:CD3283 putative pyruvate formate-lyase 3 activating enzyme; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 521220..522122 Desulfotomaculum ruminis DSM 2154 10736871 YP_004544081.1 CDS Desru_0509 NC_015589.1 522127 524499 D KEGG: cdl:CDR20291_3143 putative formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; Formate C-acetyltransferase 522127..524499 Desulfotomaculum ruminis DSM 2154 10736872 YP_004544082.1 CDS Desru_0510 NC_015589.1 524539 524793 D PFAM: TfoX domain-containing protein; KEGG: mru:mru_1848 TfoX C-terminal domain-containing protein; TfoX domain-containing protein 524539..524793 Desulfotomaculum ruminis DSM 2154 10736873 YP_004544083.1 CDS Desru_0511 NC_015589.1 525030 526217 D KEGG: ctc:CTC01889 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 525030..526217 Desulfotomaculum ruminis DSM 2154 10736874 YP_004544084.1 CDS Desru_0512 NC_015589.1 526353 526691 D KEGG: pth:PTH_0886 hypothetical protein; hypothetical protein 526353..526691 Desulfotomaculum ruminis DSM 2154 10736875 YP_004544085.1 CDS Desru_0513 NC_015589.1 526794 527045 R PFAM: protein of unknown function DUF1540; KEGG: dae:Dtox_0890 protein of unknown function DUF1540; hypothetical protein complement(526794..527045) Desulfotomaculum ruminis DSM 2154 10736876 YP_004544086.1 CDS Desru_0514 NC_015589.1 527328 527891 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dae:Dtox_3831 NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 527328..527891 Desulfotomaculum ruminis DSM 2154 10736877 YP_004544087.1 CDS Desru_0515 NC_015589.1 527830 529767 D KEGG: pth:PTH_1378 NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 527830..529767 Desulfotomaculum ruminis DSM 2154 10736878 YP_004544088.1 CDS Desru_0516 NC_015589.1 529721 531625 D KEGG: pth:PTH_1377 hydrogenase subunit; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; hydrogenase Fe-only 529721..531625 Desulfotomaculum ruminis DSM 2154 10736879 YP_004544089.1 CDS Desru_0517 NC_015589.1 531663 532556 D KEGG: hau:Haur_0091 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 531663..532556 Desulfotomaculum ruminis DSM 2154 10736880 YP_004544090.1 CDS Desru_0518 NC_015589.1 532613 533110 D PFAM: GCN5-related N-acetyltransferase; KEGG: dae:Dtox_4297 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 532613..533110 Desulfotomaculum ruminis DSM 2154 10736881 YP_004544091.1 CDS Desru_0519 NC_015589.1 533157 534032 R KEGG: drm:Dred_2301 extracellular solute-binding protein; extracellular solute-binding protein complement(533157..534032) Desulfotomaculum ruminis DSM 2154 10736882 YP_004544092.1 CDS Desru_0520 NC_015589.1 534049 534939 R KEGG: pth:PTH_0603 ABC-type tungstate transport system, permease component; tungstate ABC transporter permease complement(534049..534939) Desulfotomaculum ruminis DSM 2154 10736883 YP_004544093.1 CDS Desru_0521 NC_015589.1 535699 536724 D PFAM: molybdopterin binding domain; KEGG: pth:PTH_0688 hypothetical protein; molybdopterin binding domain-containing protein 535699..536724 Desulfotomaculum ruminis DSM 2154 10736884 YP_004544094.1 CDS Desru_0522 NC_015589.1 536797 539520 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; [2Fe-2S]-binding domain-containing protein; ferredoxin; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dae:Dtox_3440 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 536797..539520 Desulfotomaculum ruminis DSM 2154 10736885 YP_004544095.1 CDS Desru_0523 NC_015589.1 539565 539681 D hypothetical protein 539565..539681 Desulfotomaculum ruminis DSM 2154 10736886 YP_004544096.1 CDS Desru_0524 NC_015589.1 539663 541987 D PFAM: amine oxidase; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pth:PTH_0680 hypothetical protein; amine oxidase 539663..541987 Desulfotomaculum ruminis DSM 2154 10736887 YP_004544097.1 CDS Desru_0525 NC_015589.1 541984 542196 D KEGG: dae:Dtox_3438 hypothetical protein; hypothetical protein 541984..542196 Desulfotomaculum ruminis DSM 2154 10736888 YP_004544098.1 CDS Desru_0526 NC_015589.1 542222 542968 D PFAM: Methyltransferase type 11; KEGG: pth:PTH_0682 hypothetical protein; type 11 methyltransferase 542222..542968 Desulfotomaculum ruminis DSM 2154 10736889 YP_004544099.1 CDS Desru_0527 NC_015589.1 542961 543413 D KEGG: pth:PTH_0683 hypothetical protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 542961..543413 Desulfotomaculum ruminis DSM 2154 10736890 YP_004544100.1 CDS Desru_0528 NC_015589.1 543410 544816 D PFAM: Radical SAM domain protein; KEGG: pth:PTH_0684 Fe-S oxidoreductases; radical SAM protein 543410..544816 Desulfotomaculum ruminis DSM 2154 10736891 YP_004544101.1 CDS Desru_0529 NC_015589.1 544782 546119 D PFAM: AMP-dependent synthetase and ligase; KEGG: pth:PTH_0685 coenzyme F390 synthetase; AMP-dependent synthetase and ligase 544782..546119 Desulfotomaculum ruminis DSM 2154 10736892 YP_004544102.1 CDS Desru_0530 NC_015589.1 546116 547162 D PFAM: protein of unknown function DUF182; KEGG: pth:PTH_0686 xanthine and CO dehydrogenases maturation factor; hypothetical protein 546116..547162 Desulfotomaculum ruminis DSM 2154 10736893 YP_004544103.1 CDS Desru_0531 NC_015589.1 547159 548286 D KEGG: gur:Gura_1006 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein 547159..548286 Desulfotomaculum ruminis DSM 2154 10736894 YP_004544104.1 CDS Desru_0532 NC_015589.1 548304 548918 D KEGG: pth:PTH_0689 fructose-2,6-bisphosphatase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; alpha-ribazole phosphatase 548304..548918 Desulfotomaculum ruminis DSM 2154 10736895 YP_004544105.1 CDS Desru_0533 NC_015589.1 549379 549993 D PFAM: Phosphoglycerate mutase; KEGG: pth:PTH_0689 fructose-2,6-bisphosphatase; phosphoglycerate mutase 549379..549993 Desulfotomaculum ruminis DSM 2154 10736896 YP_004544106.1 CDS Desru_0534 NC_015589.1 550048 550791 D KEGG: dae:Dtox_3452 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 550048..550791 Desulfotomaculum ruminis DSM 2154 10736897 YP_004544107.1 CDS Desru_0535 NC_015589.1 550814 551020 D PFAM: TOBE domain-containing protein; KEGG: dae:Dtox_3442 TOBE domain protein; TOBE domain-containing protein 550814..551020 Desulfotomaculum ruminis DSM 2154 10736898 YP_004544108.1 CDS Desru_0536 NC_015589.1 551612 552415 D KEGG: pth:PTH_0675 ABC-type molybdate transport system, periplasmic component; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 551612..552415 Desulfotomaculum ruminis DSM 2154 10736899 YP_004544109.1 CDS Desru_0537 NC_015589.1 552431 553102 D KEGG: dae:Dtox_3445 molybdate ABC transporter, inner membrane subunit; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit 552431..553102 Desulfotomaculum ruminis DSM 2154 10736900 YP_004544110.1 CDS Desru_0538 NC_015589.1 553117 553806 D KEGG: pth:PTH_0677 ABC-type molybdate transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 553117..553806 Desulfotomaculum ruminis DSM 2154 10736901 YP_004544111.1 CDS Desru_0539 NC_015589.1 554242 554634 D KEGG: bfo:BRAFLDRAFT_287284 hypothetical protein; hypothetical protein 554242..554634 Desulfotomaculum ruminis DSM 2154 10736902 YP_004544112.1 CDS Desru_0540 NC_015589.1 554685 556232 D KEGG: drm:Dred_1731 putative delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 554685..556232 Desulfotomaculum ruminis DSM 2154 10736903 YP_004544113.1 CDS Desru_0541 NC_015589.1 556247 556705 D KEGG: lbl:LBL_4092 hypothetical protein; hypothetical protein 556247..556705 Desulfotomaculum ruminis DSM 2154 10736904 YP_004544114.1 CDS Desru_0542 NC_015589.1 556786 557067 R KEGG: npu:Npun_ER005 relaxase/mobilization nuclease family protein; relaxase/mobilization nuclease family protein complement(556786..557067) Desulfotomaculum ruminis DSM 2154 10736905 YP_004544115.1 CDS Desru_0543 NC_015589.1 557167 557661 R PFAM: Rubrerythrin; KEGG: amt:Amet_4259 rubrerythrin; rubrerythrin complement(557167..557661) Desulfotomaculum ruminis DSM 2154 10736906 YP_004544116.1 CDS Desru_0544 NC_015589.1 557999 558784 R PFAM: Bacitracin resistance protein BacA; KEGG: drm:Dred_0427 undecaprenyl pyrophosphate phosphatase; bacitracin resistance protein BacA complement(557999..558784) Desulfotomaculum ruminis DSM 2154 10736907 YP_004544117.1 CDS Desru_0545 NC_015589.1 559007 559699 R PFAM: protein of unknown function DUF1624; KEGG: drm:Dred_0429 hypothetical protein; hypothetical protein complement(559007..559699) Desulfotomaculum ruminis DSM 2154 10736908 YP_004544118.1 CDS Desru_0546 NC_015589.1 559825 560235 R manually curated; KEGG: cth:Cthe_0359 hypothetical protein; hypothetical protein complement(559825..560235) Desulfotomaculum ruminis DSM 2154 10736909 YP_004544119.1 CDS Desru_0547 NC_015589.1 560438 561319 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bbe:BBR47_46110 putative dehydrogenase; 6-phosphogluconate dehydrogenase 560438..561319 Desulfotomaculum ruminis DSM 2154 10736910 YP_004544120.1 CDS Desru_0548 NC_015589.1 561696 562244 D KEGG: spu:753956 hypothetical protein LOC753956; hypothetical protein 561696..562244 Desulfotomaculum ruminis DSM 2154 10736911 YP_004544121.1 CDS Desru_0549 NC_015589.1 562315 563004 R KEGG: sth:STH1375 hypothetical protein; hypothetical protein complement(562315..563004) Desulfotomaculum ruminis DSM 2154 10736912 YP_004544122.1 CDS Desru_0550 NC_015589.1 562997 564019 R KEGG: swo:Swol_0058 glycosyltransferase-like protein; glycosyltransferase-like protein complement(562997..564019) Desulfotomaculum ruminis DSM 2154 10736913 YP_004544123.1 CDS Desru_0551 NC_015589.1 564175 565389 D KEGG: drm:Dred_3217 STE24 endopeptidase; PFAM: peptidase M48 Ste24p; Ste24 endopeptidase 564175..565389 Desulfotomaculum ruminis DSM 2154 10736914 YP_004544124.1 CDS Desru_0552 NC_015589.1 565498 566676 D PFAM: aminotransferase class I and II; KEGG: drm:Dred_2905 GntR family transcriptional regulator; class I and II aminotransferase 565498..566676 Desulfotomaculum ruminis DSM 2154 10736915 YP_004544125.1 CDS Desru_0553 NC_015589.1 566714 567070 D KEGG: dal:Dalk_4103 protein of unknown function DUF1291; hypothetical protein 566714..567070 Desulfotomaculum ruminis DSM 2154 10736916 YP_004544126.1 CDS Desru_0554 NC_015589.1 567111 568397 R KEGG: gbm:Gbem_1226 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(567111..568397) Desulfotomaculum ruminis DSM 2154 10736917 YP_004544127.1 CDS Desru_0555 NC_015589.1 568588 569286 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: drm:Dred_1532 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane region 568588..569286 Desulfotomaculum ruminis DSM 2154 10736918 YP_004544128.1 CDS Desru_0556 NC_015589.1 569449 570729 D PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ttr:Tter_0805 Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 569449..570729 Desulfotomaculum ruminis DSM 2154 10736919 YP_004544129.1 CDS Desru_0557 NC_015589.1 570961 571455 D PFAM: TrkA-C domain protein; KEGG: dae:Dtox_3238 TrkA-C domain protein; TrkA-C domain-containing protein 570961..571455 Desulfotomaculum ruminis DSM 2154 10736920 YP_004544130.1 CDS Desru_0558 NC_015589.1 571457 572686 D PFAM: sodium/hydrogen exchanger; KEGG: drm:Dred_1518 sodium/hydrogen exchanger; sodium/hydrogen exchanger 571457..572686 Desulfotomaculum ruminis DSM 2154 10736921 YP_004544131.1 CDS Desru_0559 NC_015589.1 572880 574040 D KEGG: drm:Dred_2970 histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; ATP-binding protein 572880..574040 Desulfotomaculum ruminis DSM 2154 10736922 YP_004544132.1 CDS Desru_0560 NC_015589.1 574336 575997 D PFAM: AMP-dependent synthetase and ligase; KEGG: drm:Dred_2963 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 574336..575997 Desulfotomaculum ruminis DSM 2154 10736923 YP_004544133.1 CDS Desru_0561 NC_015589.1 576118 576447 D KEGG: drm:Dred_2960 hypothetical protein; hypothetical protein 576118..576447 Desulfotomaculum ruminis DSM 2154 10736924 YP_004544134.1 CDS Desru_0562 NC_015589.1 576444 576935 D KEGG: drm:Dred_2959 hypothetical protein; hypothetical protein 576444..576935 Desulfotomaculum ruminis DSM 2154 10736925 YP_004544135.1 CDS Desru_0563 NC_015589.1 577309 579195 D KEGG: pth:PTH_2207 amino acid transporters; amino acid transporter 577309..579195 Desulfotomaculum ruminis DSM 2154 10736926 YP_004544136.1 CDS Desru_0564 NC_015589.1 579229 581424 D KEGG: drm:Dred_2201 hypothetical protein; hypothetical protein 579229..581424 Desulfotomaculum ruminis DSM 2154 10736927 YP_004544137.1 CDS Desru_0565 NC_015589.1 581537 581845 D PFAM: NIPSNAP family containing protein; KEGG: rhi:NGR_c36880 NIPSNAP family containing protein; NIPSNAP family containing protein 581537..581845 Desulfotomaculum ruminis DSM 2154 10736928 YP_004544138.1 CDS Desru_0566 NC_015589.1 582188 582871 D KEGG: toc:Toce_1956 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 582188..582871 Desulfotomaculum ruminis DSM 2154 10736929 YP_004544139.1 CDS Desru_0568 NC_015589.1 583816 585858 R PFAM: Beta propeller domain; KEGG: dae:Dtox_3362 C-terminal beta-propeller domain-contain secreted protein-like protein; beta propeller domain-containing protein complement(583816..585858) Desulfotomaculum ruminis DSM 2154 10736931 YP_004544140.1 CDS Desru_0569 NC_015589.1 585961 587478 R KEGG: drm:Dred_2906 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; regulatory protein GntR complement(585961..587478) Desulfotomaculum ruminis DSM 2154 10736932 YP_004544141.1 CDS Desru_0570 NC_015589.1 587737 589008 D PFAM: Ankyrin; KEGG: spu:585023 similar to NACHT domain protein, putative; ankyrin 587737..589008 Desulfotomaculum ruminis DSM 2154 10736933 YP_004544142.1 CDS Desru_0571 NC_015589.1 589171 590154 D PFAM: Bile acid:sodium symporter; KEGG: tjr:TherJR_1578 bile acid:sodium symporter; bile acid:sodium symporter 589171..590154 Desulfotomaculum ruminis DSM 2154 10736934 YP_004544143.1 CDS Desru_0572 NC_015589.1 590892 592679 D KEGG: drm:Dred_1693 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein 590892..592679 Desulfotomaculum ruminis DSM 2154 10736935 YP_004544144.1 CDS Desru_0573 NC_015589.1 592766 593131 R KEGG: dau:Daud_1998 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein complement(592766..593131) Desulfotomaculum ruminis DSM 2154 10736936 YP_004544145.1 CDS Desru_0574 NC_015589.1 593236 594237 R KEGG: dau:Daud_1553 hypothetical protein; hypothetical protein complement(593236..594237) Desulfotomaculum ruminis DSM 2154 10736937 YP_004544146.1 CDS Desru_0575 NC_015589.1 594383 594850 D PFAM: VanZ family protein; KEGG: drm:Dred_2961 hypothetical protein; VanZ family protein 594383..594850 Desulfotomaculum ruminis DSM 2154 10736938 YP_004544147.1 CDS Desru_0576 NC_015589.1 594853 595527 D PFAM: protein of unknown function DUF218; KEGG: tjr:TherJR_1014 protein of unknown function DUF218; hypothetical protein 594853..595527 Desulfotomaculum ruminis DSM 2154 10736939 YP_004544148.1 CDS Desru_0577 NC_015589.1 595549 596226 D KEGG: dae:Dtox_2271 hypothetical protein; hypothetical protein 595549..596226 Desulfotomaculum ruminis DSM 2154 10736940 YP_004544149.1 CDS Desru_0578 NC_015589.1 596289 596843 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: sth:STH940 G/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 596289..596843 Desulfotomaculum ruminis DSM 2154 10736941 YP_004544150.1 CDS Desru_0579 NC_015589.1 596935 597303 D PFAM: transcriptional regulator PadR family protein; KEGG: dau:Daud_0311 PadR-like family transcriptional regulator; PadR family transcriptional regulator 596935..597303 Desulfotomaculum ruminis DSM 2154 10736942 YP_004544151.1 CDS Desru_0580 NC_015589.1 597315 598130 D KEGG: dau:Daud_0310 ABC-transporter-like protein, periplasmic substrate-binding protein; ABC transporter periplasmic substrate-binding protein-like protein 597315..598130 Desulfotomaculum ruminis DSM 2154 10736943 YP_004544152.1 CDS Desru_0581 NC_015589.1 598381 599493 D PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2674 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 598381..599493 Desulfotomaculum ruminis DSM 2154 10736944 YP_004544153.1 CDS Desru_0582 NC_015589.1 599658 600386 D KEGG: drm:Dred_2751 UbiC transcription regulator-associated domain-containing protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein 599658..600386 Desulfotomaculum ruminis DSM 2154 10736945 YP_004544154.1 CDS Desru_0583 NC_015589.1 600910 601662 D KEGG: dvm:DvMF_0518 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 600910..601662 Desulfotomaculum ruminis DSM 2154 10736946 YP_004544155.1 CDS Desru_0584 NC_015589.1 601743 602816 D SMART: extracellular solute-binding protein family 3; KEGG: dvm:DvMF_0519 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; family 3 extracellular solute-binding protein 601743..602816 Desulfotomaculum ruminis DSM 2154 10736947 YP_004544156.1 CDS Desru_0585 NC_015589.1 602941 603726 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_0520 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 602941..603726 Desulfotomaculum ruminis DSM 2154 10736948 YP_004544157.1 CDS Desru_0586 NC_015589.1 603730 604563 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_0521 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 603730..604563 Desulfotomaculum ruminis DSM 2154 10736949 YP_004544158.1 CDS Desru_0587 NC_015589.1 604539 605315 D KEGG: dvm:DvMF_0522 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 604539..605315 Desulfotomaculum ruminis DSM 2154 10736950 YP_004544159.1 CDS Desru_0588 NC_015589.1 605403 606521 D TIGRFAM: alanine dehydrogenase; KEGG: drm:Dred_2866 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 605403..606521 Desulfotomaculum ruminis DSM 2154 10736951 YP_004544160.1 CDS Desru_0589 NC_015589.1 606574 607962 D PFAM: aminotransferase class-III; KEGG: dvm:DvMF_0516 aminotransferase class-III; class III aminotransferase 606574..607962 Desulfotomaculum ruminis DSM 2154 10736952 YP_004544161.1 CDS Desru_0590 NC_015589.1 608027 609769 D KEGG: dhd:Dhaf_4634 sulfoacetaldehyde acetyltransferase; TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; sulfoacetaldehyde acetyltransferase 608027..609769 Desulfotomaculum ruminis DSM 2154 10736953 YP_004544162.1 CDS Desru_0591 NC_015589.1 610030 611259 D PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH0472 hypothetical protein; major facilitator superfamily protein 610030..611259 Desulfotomaculum ruminis DSM 2154 10736954 YP_004544163.1 CDS Desru_0592 NC_015589.1 611320 611508 R KEGG: ptm:GSPATT00013381001 hypothetical protein; hypothetical protein complement(611320..611508) Desulfotomaculum ruminis DSM 2154 10736955 YP_004544164.1 CDS Desru_0593 NC_015589.1 611990 612172 D KEGG: dae:Dtox_1608 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 611990..612172 Desulfotomaculum ruminis DSM 2154 10736956 YP_004544165.1 CDS Desru_0594 NC_015589.1 612195 613823 D KEGG: dae:Dtox_1609 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane; hybrid cluster protein 612195..613823 Desulfotomaculum ruminis DSM 2154 10736957 YP_004544166.1 CDS Desru_0595 NC_015589.1 613948 615375 R PFAM: malic protein NAD-binding; malic protein domain protein; amino acid-binding ACT domain protein; KEGG: drm:Dred_2955 malate dehydrogenase; malic protein NAD-binding protein complement(613948..615375) Desulfotomaculum ruminis DSM 2154 10736958 YP_004544167.1 CDS Desru_0596 NC_015589.1 616106 616690 D PFAM: regulatory protein TetR; KEGG: dsy:DSY2070 hypothetical protein; regulatory protein TetR 616106..616690 Desulfotomaculum ruminis DSM 2154 10736959 YP_004544168.1 CDS Desru_0597 NC_015589.1 616687 617775 D KEGG: drm:Dred_2954 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 616687..617775 Desulfotomaculum ruminis DSM 2154 10736960 YP_004544169.1 CDS Desru_0598 NC_015589.1 617790 620891 D PFAM: acriflavin resistance protein; KEGG: drm:Dred_2953 acriflavin resistance protein; acriflavin resistance protein 617790..620891 Desulfotomaculum ruminis DSM 2154 10736961 YP_004544170.1 CDS Desru_0599 NC_015589.1 620948 622249 R PFAM: sodium:dicarboxylate symporter; KEGG: aav:Aave_3501 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter complement(620948..622249) Desulfotomaculum ruminis DSM 2154 10736962 YP_004544171.1 CDS Desru_0600 NC_015589.1 622591 623751 R KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; altronate dehydratase complement(622591..623751) Desulfotomaculum ruminis DSM 2154 10736963 YP_004544172.1 CDS Desru_0601 NC_015589.1 623760 624038 R PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein; SAF domain-containing protein complement(623760..624038) Desulfotomaculum ruminis DSM 2154 10736964 YP_004544173.1 CDS Desru_0602 NC_015589.1 624568 625686 D KEGG: drm:Dred_2952 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase 624568..625686 Desulfotomaculum ruminis DSM 2154 10736965 YP_004544174.1 CDS Desru_0603 NC_015589.1 625732 626166 R KEGG: drm:Dred_2951 hypothetical protein; hypothetical protein complement(625732..626166) Desulfotomaculum ruminis DSM 2154 10736966 YP_004544175.1 CDS Desru_0604 NC_015589.1 626321 629455 R PFAM: acriflavin resistance protein; KEGG: drm:Dred_2950 acriflavin resistance protein; acriflavin resistance protein complement(626321..629455) Desulfotomaculum ruminis DSM 2154 10736967 YP_004544176.1 CDS Desru_0605 NC_015589.1 629452 630582 R KEGG: drm:Dred_2949 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(629452..630582) Desulfotomaculum ruminis DSM 2154 10736968 YP_004544177.1 CDS Desru_0606 NC_015589.1 630622 631197 R PFAM: regulatory protein TetR; Tetracycline transcriptional regulator QacR-related domain-containing protein; KEGG: dae:Dtox_1941 transcriptional regulator, TetR family; regulatory protein TetR complement(630622..631197) Desulfotomaculum ruminis DSM 2154 10736969 YP_004544178.1 CDS Desru_0607 NC_015589.1 636989 638314 R KEGG: cbi:CLJ_B0745 hypothetical protein; hypothetical protein complement(636989..638314) Desulfotomaculum ruminis DSM 2154 10736973 YP_004544179.1 CDS Desru_0608 NC_015589.1 638414 639160 R PFAM: protein of unknown function DUF81; KEGG: bca:BCE_1737 hypothetical protein; hypothetical protein complement(638414..639160) Desulfotomaculum ruminis DSM 2154 10736974 YP_004544180.1 CDS Desru_0609 NC_015589.1 639285 640625 R KEGG: drm:Dred_1810 hexokinase; PFAM: hexokinase; hexokinase complement(639285..640625) Desulfotomaculum ruminis DSM 2154 10736975 YP_004544181.1 CDS Desru_0610 NC_015589.1 640731 641303 R PFAM: HPP family protein; KEGG: drm:Dred_2943 HPP family protein+B94; HPP family protein complement(640731..641303) Desulfotomaculum ruminis DSM 2154 10736976 YP_004544182.1 CDS Desru_0611 NC_015589.1 641545 641970 D KEGG: slp:Slip_0935 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Rrf2 family transcriptional regulator 641545..641970 Desulfotomaculum ruminis DSM 2154 10736977 YP_004544183.1 CDS Desru_0612 NC_015589.1 642155 642676 D KEGG: dae:Dtox_2140 rubrerythrin; rubrerythrin 642155..642676 Desulfotomaculum ruminis DSM 2154 10736978 YP_004544184.1 CDS Desru_0613 NC_015589.1 642716 642871 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: drm:Dred_2941 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 642716..642871 Desulfotomaculum ruminis DSM 2154 10736979 YP_004544185.1 CDS Desru_0614 NC_015589.1 642946 643773 R PFAM: alpha/beta hydrolase fold; KEGG: jde:Jden_2389 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein complement(642946..643773) Desulfotomaculum ruminis DSM 2154 10736980 YP_004544186.1 CDS Desru_0615 NC_015589.1 644008 645183 R KEGG: drm:Dred_2939 putative RNA methylase; PFAM: RNA methylase; THUMP domain-containing protein; rRNA (guanine-N(2)-)-methyltransferase complement(644008..645183) Desulfotomaculum ruminis DSM 2154 10736981 YP_004544187.1 CDS Desru_0616 NC_015589.1 645494 645685 D KEGG: drm:Dred_2937 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 645494..645685 Desulfotomaculum ruminis DSM 2154 10736982 YP_004544188.1 CDS Desru_0617 NC_015589.1 645747 645902 R PFAM: protein of unknown function DUF1540; KEGG: nth:Nther_0851 protein of unknown function DUF1540; hypothetical protein complement(645747..645902) Desulfotomaculum ruminis DSM 2154 10736983 YP_004544189.1 CDS Desru_0618 NC_015589.1 646182 647045 D KEGG: drm:Dred_2936 hypothetical protein; hypothetical protein 646182..647045 Desulfotomaculum ruminis DSM 2154 10736984 YP_004544190.1 CDS Desru_0619 NC_015589.1 647335 649920 D PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: drm:Dred_1495 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; iron-containing alcohol dehydrogenase 647335..649920 Desulfotomaculum ruminis DSM 2154 10736985 YP_004544191.1 CDS Desru_0620 NC_015589.1 650255 650905 D PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: drm:Dred_2929 heat domain-containing protein; PBS lyase HEAT domain-containing protein 650255..650905 Desulfotomaculum ruminis DSM 2154 10736986 YP_004544192.1 CDS Desru_0621 NC_015589.1 651009 652304 D KEGG: drm:Dred_2928 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 651009..652304 Desulfotomaculum ruminis DSM 2154 10736987 YP_004544193.1 CDS Desru_0622 NC_015589.1 652297 653031 D KEGG: dae:Dtox_1572 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 652297..653031 Desulfotomaculum ruminis DSM 2154 10736988 YP_004544194.1 CDS Desru_0623 NC_015589.1 653028 654212 D PFAM: protein of unknown function DUF214; KEGG: swo:Swol_2458 hypothetical protein; hypothetical protein 653028..654212 Desulfotomaculum ruminis DSM 2154 10736989 YP_004544195.1 CDS Desru_0624 NC_015589.1 654357 655277 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_2925 hypothetical protein; hypothetical protein 654357..655277 Desulfotomaculum ruminis DSM 2154 10736990 YP_004544196.1 CDS Desru_0625 NC_015589.1 655281 655805 D KEGG: drm:Dred_2924 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 655281..655805 Desulfotomaculum ruminis DSM 2154 10736991 YP_004544197.1 CDS Desru_0626 NC_015589.1 655979 656827 D KEGG: drm:Dred_2923 hypothetical protein; hypothetical protein 655979..656827 Desulfotomaculum ruminis DSM 2154 10736992 YP_004544198.1 CDS Desru_0627 NC_015589.1 656869 657027 R hypothetical protein complement(656869..657027) Desulfotomaculum ruminis DSM 2154 10736993 YP_004544199.1 CDS Desru_0628 NC_015589.1 657352 657507 D hypothetical protein 657352..657507 Desulfotomaculum ruminis DSM 2154 10736994 YP_004544200.1 CDS Desru_0629 NC_015589.1 657777 658196 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bth:BT_1384 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(657777..658196) Desulfotomaculum ruminis DSM 2154 10736995 YP_004544201.1 CDS Desru_0630 NC_015589.1 658582 660168 R KEGG: cbf:CLI_1777 leucine-rich repeat-containing protein; hypothetical protein complement(658582..660168) Desulfotomaculum ruminis DSM 2154 10736996 YP_004544202.1 CDS Desru_0631 NC_015589.1 660710 661081 R KEGG: gga:420294 similar to cylindromatosis (turban tumor syndrome); cylindromatosis 1, turban tumor syndrome; hypothetical protein complement(660710..661081) Desulfotomaculum ruminis DSM 2154 10736999 YP_004544203.1 CDS Desru_0632 NC_015589.1 661480 663144 R KEGG: drm:Dred_1378 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; Na/Pi-cotransporter II-like protein complement(661480..663144) Desulfotomaculum ruminis DSM 2154 10737002 YP_004544204.1 CDS Desru_0633 NC_015589.1 663867 664592 D PFAM: Methyltransferase type 11; KEGG: dhd:Dhaf_1942 methyltransferase type 11; type 11 methyltransferase 663867..664592 Desulfotomaculum ruminis DSM 2154 10737004 YP_004544205.1 CDS Desru_0634 NC_015589.1 664797 665711 R KEGG: drm:Dred_0386 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RluA family pseudouridine synthase complement(664797..665711) Desulfotomaculum ruminis DSM 2154 10737005 YP_004544206.1 CDS Desru_0635 NC_015589.1 665990 667573 D KEGG: drm:Dred_0398 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; peptide chain release factor 3 665990..667573 Desulfotomaculum ruminis DSM 2154 10737006 YP_004544207.1 CDS Desru_0636 NC_015589.1 667828 668013 R KEGG: bfo:BRAFLDRAFT_217793 hypothetical protein; hypothetical protein complement(667828..668013) Desulfotomaculum ruminis DSM 2154 10737007 YP_004544208.1 CDS Desru_0637 NC_015589.1 668821 669138 R KEGG: ptr:745338 hypothetical protein LOC745338; hypothetical protein complement(668821..669138) Desulfotomaculum ruminis DSM 2154 10737008 YP_004544209.1 CDS Desru_0638 NC_015589.1 669500 670060 D KEGG: drm:Dred_2918 hypothetical protein; hypothetical protein 669500..670060 Desulfotomaculum ruminis DSM 2154 10737009 YP_004544210.1 CDS Desru_0639 NC_015589.1 670248 672686 D PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2917 S-layer domain-containing protein; S-layer protein 670248..672686 Desulfotomaculum ruminis DSM 2154 10737010 YP_004544211.1 CDS Desru_0640 NC_015589.1 672939 673202 R KEGG: drm:Dred_2916 hypothetical protein; hypothetical protein complement(672939..673202) Desulfotomaculum ruminis DSM 2154 10737011 YP_004544212.1 CDS Desru_0641 NC_015589.1 673416 673724 D SMART: helix-turn-helix domain protein; KEGG: drm:Dred_2915 XRE family transcriptional regulator; helix-turn-helix domain-containing protein 673416..673724 Desulfotomaculum ruminis DSM 2154 10737012 YP_004544213.1 CDS Desru_0642 NC_015589.1 673795 674094 R manually curated; KEGG: drm:Dred_2914 hypothetical protein; hypothetical protein complement(673795..674094) Desulfotomaculum ruminis DSM 2154 10737013 YP_004544214.1 CDS Desru_0643 NC_015589.1 674269 675216 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: drm:Dred_2913 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(674269..675216) Desulfotomaculum ruminis DSM 2154 10737014 YP_004544215.1 CDS Desru_0644 NC_015589.1 675472 675999 R PFAM: manganese containing catalase; KEGG: drm:Dred_2909 manganese containing catalase; manganese containing catalase complement(675472..675999) Desulfotomaculum ruminis DSM 2154 10737015 YP_004544216.1 CDS Desru_0645 NC_015589.1 676211 676411 D KEGG: cme:CMR168C hypothetical protein; hypothetical protein 676211..676411 Desulfotomaculum ruminis DSM 2154 10737016 YP_004544217.1 CDS Desru_0646 NC_015589.1 676895 677359 D KEGG: cci:CC1G_00839 atypical/PIKK/ATM protein kinase; hypothetical protein 676895..677359 Desulfotomaculum ruminis DSM 2154 10737017 YP_004544218.1 CDS Desru_0647 NC_015589.1 677500 677724 D KEGG: bfo:BRAFLDRAFT_80349 hypothetical protein; hypothetical protein 677500..677724 Desulfotomaculum ruminis DSM 2154 10737018 YP_004544219.1 CDS Desru_0648 NC_015589.1 677721 677936 D KEGG: mmu:268379 ATP-binding cassette, sub-family A (ABC1), member 13; hypothetical protein 677721..677936 Desulfotomaculum ruminis DSM 2154 10737019 YP_004544220.1 CDS Desru_0649 NC_015589.1 678489 678830 D KEGG: dae:Dtox_2514 hypothetical protein; hypothetical protein 678489..678830 Desulfotomaculum ruminis DSM 2154 10737020 YP_004544221.1 CDS Desru_0650 NC_015589.1 678845 679927 D KEGG: mta:Moth_0304 hypothetical protein; hypothetical protein 678845..679927 Desulfotomaculum ruminis DSM 2154 10737021 YP_004544222.1 CDS Desru_0651 NC_015589.1 679928 680851 D KEGG: dae:Dtox_1401 hypothetical protein; hypothetical protein 679928..680851 Desulfotomaculum ruminis DSM 2154 10737022 YP_004544223.1 CDS Desru_0652 NC_015589.1 680879 681187 D KEGG: dae:Dtox_2510 hypothetical protein; hypothetical protein 680879..681187 Desulfotomaculum ruminis DSM 2154 10737023 YP_004544224.1 CDS Desru_0653 NC_015589.1 681237 681614 D KEGG: dae:Dtox_2509 hypothetical protein; hypothetical protein 681237..681614 Desulfotomaculum ruminis DSM 2154 10737024 YP_004544225.1 CDS Desru_0654 NC_015589.1 681614 684010 D KEGG: dae:Dtox_2508 hypothetical protein; hypothetical protein 681614..684010 Desulfotomaculum ruminis DSM 2154 10737025 YP_004544226.1 CDS Desru_0655 NC_015589.1 684000 686411 D KEGG: dae:Dtox_2507 hypothetical protein; hypothetical protein 684000..686411 Desulfotomaculum ruminis DSM 2154 10737026 YP_004544227.1 CDS Desru_0656 NC_015589.1 686478 687476 D PFAM: Peptidase M23; Lytic transglycosylase catalytic; KEGG: dae:Dtox_2504 peptidase M23; peptidase M23 686478..687476 Desulfotomaculum ruminis DSM 2154 10737027 YP_004544228.1 CDS Desru_0657 NC_015589.1 687499 689325 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: drm:Dred_0799 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 687499..689325 Desulfotomaculum ruminis DSM 2154 10737028 YP_004544229.1 CDS Desru_0658 NC_015589.1 689312 690544 D KEGG: drm:Dred_0800 chromosome partitioning ATPase protein-like protein; chromosome partitioning ATPase 689312..690544 Desulfotomaculum ruminis DSM 2154 10737029 YP_004544230.1 CDS Desru_0659 NC_015589.1 690541 691587 D KEGG: drm:Dred_0801 hypothetical protein; hypothetical protein 690541..691587 Desulfotomaculum ruminis DSM 2154 10737030 YP_004544231.1 CDS Desru_0660 NC_015589.1 691559 692197 D PFAM: SAF domain protein; KEGG: drm:Dred_0804 hypothetical protein; SAF domain-containing protein 691559..692197 Desulfotomaculum ruminis DSM 2154 10737031 YP_004544232.1 CDS Desru_0661 NC_015589.1 692210 693478 D KEGG: adg:Adeg_0779 chromosome partitioning ATPase; hypothetical protein 692210..693478 Desulfotomaculum ruminis DSM 2154 10737032 YP_004544233.1 CDS Desru_0662 NC_015589.1 693494 694750 D PFAM: type II secretion system protein E; KEGG: bbe:BBR47_05700 hypothetical protein; type II secretion system protein E 693494..694750 Desulfotomaculum ruminis DSM 2154 10737033 YP_004544234.1 CDS Desru_0663 NC_015589.1 694720 695616 D PFAM: Type II secretion system F domain; KEGG: aco:Amico_1198 type II secretion system F domain protein; type II secretion system F domain-containing protein 694720..695616 Desulfotomaculum ruminis DSM 2154 10737034 YP_004544235.1 CDS Desru_0664 NC_015589.1 695633 696496 D PFAM: Type II secretion system F domain; KEGG: nth:Nther_2314 type II secretion system protein; type II secretion system F domain-containing protein 695633..696496 Desulfotomaculum ruminis DSM 2154 10737035 YP_004544236.1 CDS Desru_0665 NC_015589.1 696512 697069 D KEGG: adg:Adeg_0789 hypothetical protein; hypothetical protein 696512..697069 Desulfotomaculum ruminis DSM 2154 10737036 YP_004544237.1 CDS Desru_0666 NC_015589.1 697091 697801 D PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: mta:Moth_1550 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; peptidase A24A domain-containing protein 697091..697801 Desulfotomaculum ruminis DSM 2154 10737037 YP_004544238.1 CDS Desru_0667 NC_015589.1 697820 698038 D KEGG: ere:EUBREC_1143 methyl-accepting chemotaxis protein; hypothetical protein 697820..698038 Desulfotomaculum ruminis DSM 2154 10737038 YP_004544239.1 CDS Desru_0668 NC_015589.1 698115 698594 D PFAM: TadE family protein; KEGG: dae:Dtox_2479 TadE family protein; TadE family protein 698115..698594 Desulfotomaculum ruminis DSM 2154 10737039 YP_004544240.1 CDS Desru_0669 NC_015589.1 698602 699081 D KEGG: drm:Dred_0810 hypothetical protein; hypothetical protein 698602..699081 Desulfotomaculum ruminis DSM 2154 10737040 YP_004544241.1 CDS Desru_0670 NC_015589.1 699107 699349 R KEGG: oaa:100092213 hypothetical protein LOC100092213; hypothetical protein complement(699107..699349) Desulfotomaculum ruminis DSM 2154 10737041 YP_004544242.1 CDS Desru_0671 NC_015589.1 699433 699855 D KEGG: drm:Dred_0812 hypothetical protein; hypothetical protein 699433..699855 Desulfotomaculum ruminis DSM 2154 10737042 YP_004544243.1 CDS Desru_0672 NC_015589.1 700190 700669 D KEGG: tet:TTHERM_00697530 TBC domain containing protein; hypothetical protein 700190..700669 Desulfotomaculum ruminis DSM 2154 10737043 YP_004544244.1 CDS Desru_0673 NC_015589.1 700730 702361 D KEGG: drm:Dred_0820 Ig domain-containing protein; hypothetical protein 700730..702361 Desulfotomaculum ruminis DSM 2154 10737044 YP_004544245.1 CDS Desru_0674 NC_015589.1 702377 704629 D KEGG: drm:Dred_0821 hypothetical protein; hypothetical protein 702377..704629 Desulfotomaculum ruminis DSM 2154 10737045 YP_004544246.1 CDS Desru_0675 NC_015589.1 704642 705076 D KEGG: drm:Dred_0812 hypothetical protein; hypothetical protein 704642..705076 Desulfotomaculum ruminis DSM 2154 10737046 YP_004544247.1 CDS Desru_0676 NC_015589.1 705159 705461 D TIGRFAM: prevent-host-death family protein; KEGG: dau:Daud_2131 prevent-host-death family protein; prevent-host-death family protein 705159..705461 Desulfotomaculum ruminis DSM 2154 10737047 YP_004544248.1 CDS Desru_0677 NC_015589.1 705454 705921 D KEGG: dau:Daud_2130 PilT domain-containing protein; PilT domain-containing protein 705454..705921 Desulfotomaculum ruminis DSM 2154 10737048 YP_004544249.1 CDS Desru_0678 NC_015589.1 705953 706852 D PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_0939 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein 705953..706852 Desulfotomaculum ruminis DSM 2154 10737049 YP_004544250.1 CDS Desru_0679 NC_015589.1 707305 708951 D KEGG: drm:Dred_0820 Ig domain-containing protein; hypothetical protein 707305..708951 Desulfotomaculum ruminis DSM 2154 10737050 YP_004544251.1 CDS Desru_0680 NC_015589.1 708966 709367 D KEGG: drm:Dred_0821 hypothetical protein; hypothetical protein 708966..709367 Desulfotomaculum ruminis DSM 2154 10737051 YP_004544252.1 CDS Desru_0681 NC_015589.1 709345 711240 D KEGG: drm:Dred_0821 hypothetical protein; hypothetical protein 709345..711240 Desulfotomaculum ruminis DSM 2154 10737052 YP_004544253.1 CDS Desru_0682 NC_015589.1 711359 712108 D KEGG: drm:Dred_0836 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; EAL domain-containing protein 711359..712108 Desulfotomaculum ruminis DSM 2154 10737053 YP_004544254.1 CDS Desru_0683 NC_015589.1 712102 712632 D KEGG: drm:Dred_0837 hypothetical protein; hypothetical protein 712102..712632 Desulfotomaculum ruminis DSM 2154 10737054 YP_004544255.1 CDS Desru_0684 NC_015589.1 712626 713615 D KEGG: adg:Adeg_0813 hypothetical protein; hypothetical protein 712626..713615 Desulfotomaculum ruminis DSM 2154 10737055 YP_004544256.1 CDS Desru_0685 NC_015589.1 713781 714083 D KEGG: mta:Moth_1573 hypothetical protein; hypothetical protein 713781..714083 Desulfotomaculum ruminis DSM 2154 10737056 YP_004544257.1 CDS Desru_0686 NC_015589.1 714113 715111 D KEGG: drm:Dred_0973 hypothetical protein; hypothetical protein 714113..715111 Desulfotomaculum ruminis DSM 2154 10737057 YP_004544258.1 CDS Desru_0687 NC_015589.1 715149 715565 D KEGG: nvi:100120404 similar to pom1; hypothetical protein 715149..715565 Desulfotomaculum ruminis DSM 2154 10737058 YP_004544259.1 CDS Desru_0688 NC_015589.1 716147 716488 D manually curated; KEGG: drm:Dred_0839 hypothetical protein; hypothetical protein 716147..716488 Desulfotomaculum ruminis DSM 2154 10737059 YP_004544260.1 CDS Desru_0689 NC_015589.1 716415 716876 D KEGG: drm:Dred_0840 hypothetical protein; hypothetical protein 716415..716876 Desulfotomaculum ruminis DSM 2154 10737060 YP_004544261.1 CDS Desru_0690 NC_015589.1 717102 717539 D KEGG: drm:Dred_0841 hypothetical protein; hypothetical protein 717102..717539 Desulfotomaculum ruminis DSM 2154 10737061 YP_004544262.1 CDS Desru_0691 NC_015589.1 717536 718027 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0842 membrane-bound metal-dependent hydrolase; membrane-bound metal-dependent hydrolase 717536..718027 Desulfotomaculum ruminis DSM 2154 10737062 YP_004544263.1 CDS Desru_0692 NC_015589.1 718015 720075 D PFAM: TRAG family protein; KEGG: drm:Dred_0843 TraG family protein; TRAG family protein 718015..720075 Desulfotomaculum ruminis DSM 2154 10737063 YP_004544264.1 CDS Desru_0693 NC_015589.1 720087 720626 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0844 membrane-bound metal-dependent hydrolase; membrane-bound metal-dependent hydrolase 720087..720626 Desulfotomaculum ruminis DSM 2154 10737064 YP_004544265.1 CDS Desru_0694 NC_015589.1 720644 721459 D KEGG: drm:Dred_0845 RNA-binding S1 domain-containing protein; RNA-binding S1 domain-containing protein 720644..721459 Desulfotomaculum ruminis DSM 2154 10737065 YP_004544266.1 CDS Desru_0695 NC_015589.1 721477 721974 D KEGG: drm:Dred_0846 hypothetical protein; hypothetical protein 721477..721974 Desulfotomaculum ruminis DSM 2154 10737066 YP_004544267.1 CDS Desru_0696 NC_015589.1 722883 723179 D KEGG: drm:Dred_0848 hypothetical protein; hypothetical protein 722883..723179 Desulfotomaculum ruminis DSM 2154 10737067 YP_004544268.1 CDS Desru_0697 NC_015589.1 723215 723871 D KEGG: drm:Dred_0849 hypothetical protein; hypothetical protein 723215..723871 Desulfotomaculum ruminis DSM 2154 10737068 YP_004544269.1 CDS Desru_0699 NC_015589.1 724741 725409 D manually curated; KEGG: drm:Dred_0988 hypothetical protein; hypothetical protein 724741..725409 Desulfotomaculum ruminis DSM 2154 10737070 YP_004544270.1 CDS Desru_0700 NC_015589.1 725644 725841 D KEGG: nve:NEMVE_v1g91406 hypothetical protein; hypothetical protein 725644..725841 Desulfotomaculum ruminis DSM 2154 10737071 YP_004544271.1 CDS Desru_0701 NC_015589.1 725808 726344 D KEGG: cyp:PCC8801_4537 GCN5-related N-acetyltransferase; hypothetical protein 725808..726344 Desulfotomaculum ruminis DSM 2154 10737072 YP_004544272.1 CDS Desru_0702 NC_015589.1 726650 727381 D KEGG: drm:Dred_0854 hypothetical protein; hypothetical protein 726650..727381 Desulfotomaculum ruminis DSM 2154 10737073 YP_004544273.1 CDS Desru_0703 NC_015589.1 727483 728193 D KEGG: drm:Dred_0855 glutamine amidotransferase, class-II; glutamine amidotransferase 727483..728193 Desulfotomaculum ruminis DSM 2154 10737074 YP_004544274.1 CDS Desru_0704 NC_015589.1 728204 728716 D KEGG: drm:Dred_0856 hypothetical protein; hypothetical protein 728204..728716 Desulfotomaculum ruminis DSM 2154 10737075 YP_004544275.1 CDS Desru_0705 NC_015589.1 728831 729562 R KEGG: tel:tlr0420 hypothetical protein; hypothetical protein complement(728831..729562) Desulfotomaculum ruminis DSM 2154 10737076 YP_004544276.1 CDS Desru_0706 NC_015589.1 729627 730901 R PFAM: integrase family protein; KEGG: dae:Dtox_1846 integrase family protein; integrase family protein complement(729627..730901) Desulfotomaculum ruminis DSM 2154 10737077 YP_004544277.1 CDS Desru_0707 NC_015589.1 731188 731322 R hypothetical protein complement(731188..731322) Desulfotomaculum ruminis DSM 2154 10737078 YP_004544278.1 CDS Desru_0708 NC_015589.1 731395 731802 D KEGG: dae:Dtox_3723 transcriptional regulator, XRE family; XRE family transcriptional regulator 731395..731802 Desulfotomaculum ruminis DSM 2154 10737079 YP_004544279.1 CDS Desru_0709 NC_015589.1 731918 733189 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: dae:Dtox_3724 cell divisionFtsK/SpoIIIE; cell division protein FtsK 731918..733189 Desulfotomaculum ruminis DSM 2154 10737080 YP_004544280.1 CDS Desru_0710 NC_015589.1 733221 733706 D manually curated; KEGG: dae:Dtox_3725 hypothetical protein; hypothetical protein 733221..733706 Desulfotomaculum ruminis DSM 2154 10737081 YP_004544281.1 CDS Desru_0711 NC_015589.1 733672 734061 D KEGG: dae:Dtox_3726 hypothetical protein; hypothetical protein 733672..734061 Desulfotomaculum ruminis DSM 2154 10737082 YP_004544282.1 CDS Desru_0712 NC_015589.1 734670 734798 D hypothetical protein 734670..734798 Desulfotomaculum ruminis DSM 2154 10737083 YP_004544283.1 CDS Desru_0714 NC_015589.1 735469 736083 R KEGG: drm:Dred_0889 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(735469..736083) Desulfotomaculum ruminis DSM 2154 10737085 YP_004544284.1 CDS Desru_0715 NC_015589.1 736208 736420 D KEGG: drm:Dred_0891 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 736208..736420 Desulfotomaculum ruminis DSM 2154 10737086 YP_004544285.1 CDS Desru_0716 NC_015589.1 736565 736861 D KEGG: mcc:715535 similar to Synaptic vesicle membrane protein VAT-1 homolog; hypothetical protein 736565..736861 Desulfotomaculum ruminis DSM 2154 10737087 YP_004544286.1 CDS Desru_0717 NC_015589.1 736943 737467 R KEGG: drm:Dred_0889 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(736943..737467) Desulfotomaculum ruminis DSM 2154 10737088 YP_004544287.1 CDS Desru_0718 NC_015589.1 737604 737819 D KEGG: clj:CLJU_c00220 putative phage protein with HTH motif; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 737604..737819 Desulfotomaculum ruminis DSM 2154 10737089 YP_004544288.1 CDS Desru_0719 NC_015589.1 737920 738693 D KEGG: drm:Dred_0892 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 737920..738693 Desulfotomaculum ruminis DSM 2154 10737090 YP_004544289.1 CDS Desru_0720 NC_015589.1 738695 739534 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: drm:Dred_0893 ParB-like partition protein; SMART: ParB domain protein nuclease; parB-like partition protein 738695..739534 Desulfotomaculum ruminis DSM 2154 10737091 YP_004544290.1 CDS Desru_0721 NC_015589.1 739547 740827 D KEGG: drm:Dred_0895 hypothetical protein; hypothetical protein 739547..740827 Desulfotomaculum ruminis DSM 2154 10737092 YP_004544291.1 CDS Desru_0722 NC_015589.1 740880 741152 D KEGG: pdi:BDI_0889 hypothetical protein; hypothetical protein 740880..741152 Desulfotomaculum ruminis DSM 2154 10737093 YP_004544292.1 CDS Desru_0723 NC_015589.1 741301 741750 D KEGG: mmy:MSC_0061 prolipoprotein; hypothetical protein 741301..741750 Desulfotomaculum ruminis DSM 2154 10737094 YP_004544293.1 CDS Desru_0724 NC_015589.1 742138 743796 D PFAM: Resolvase domain; Recombinase; KEGG: dae:Dtox_2966 resolvase domain protein; resolvase domain-containing protein 742138..743796 Desulfotomaculum ruminis DSM 2154 10737095 YP_004544294.1 CDS Desru_0725 NC_015589.1 743751 743918 R PFAM: manganese containing catalase; KEGG: drm:Dred_2909 manganese containing catalase; manganese containing catalase complement(743751..743918) Desulfotomaculum ruminis DSM 2154 10737096 YP_004544295.1 CDS Desru_0726 NC_015589.1 743937 744200 R KEGG: drm:Dred_2908 spore coat peptide assembly protein cotJB; spore coat peptide assembly protein cotJB complement(743937..744200) Desulfotomaculum ruminis DSM 2154 10737097 YP_004544296.1 CDS Desru_0727 NC_015589.1 744215 744493 R KEGG: drm:Dred_2907 hypothetical protein; hypothetical protein complement(744215..744493) Desulfotomaculum ruminis DSM 2154 10737098 YP_004544297.1 CDS Desru_0728 NC_015589.1 744742 746175 D PFAM: phosphoglucose isomerase (PGI); KEGG: drm:Dred_2902 glucose-6-phosphate isomerase; phosphoglucose isomerase 744742..746175 Desulfotomaculum ruminis DSM 2154 10737099 YP_004544298.1 CDS Desru_0729 NC_015589.1 746280 746615 D KEGG: drm:Dred_2901 hypothetical protein; hypothetical protein 746280..746615 Desulfotomaculum ruminis DSM 2154 10737100 YP_004544299.1 CDS Desru_0730 NC_015589.1 746973 747611 D PFAM: Rhomboid family protein; KEGG: drm:Dred_2900 rhomboid family protein; rhomboid family protein 746973..747611 Desulfotomaculum ruminis DSM 2154 10737101 YP_004544300.1 CDS Desru_0731 NC_015589.1 747628 747963 R KEGG: drm:Dred_2899 hypothetical protein; hypothetical protein complement(747628..747963) Desulfotomaculum ruminis DSM 2154 10737102 YP_004544301.1 CDS Desru_0732 NC_015589.1 748128 748583 D PFAM: GCN5-related N-acetyltransferase; KEGG: drm:Dred_2898 acetyltransferase; N-acetyltransferase GCN5 748128..748583 Desulfotomaculum ruminis DSM 2154 10737103 YP_004544302.1 CDS Desru_0733 NC_015589.1 748600 748974 D KEGG: drm:Dred_2897 hypothetical protein; hypothetical protein 748600..748974 Desulfotomaculum ruminis DSM 2154 10737104 YP_004544303.1 CDS Desru_0734 NC_015589.1 749110 749625 D KEGG: drm:Dred_2896 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit 749110..749625 Desulfotomaculum ruminis DSM 2154 10737105 YP_004544304.1 CDS Desru_0735 NC_015589.1 749692 749967 D KEGG: drm:Dred_2895 CopG family transcriptional regulator; CopG family transcriptional regulator 749692..749967 Desulfotomaculum ruminis DSM 2154 10737106 YP_004544305.1 CDS Desru_0736 NC_015589.1 749974 750324 D PFAM: PemK family protein; KEGG: drm:Dred_2894 transcriptional modulator of MazE/toxin, MazF; PemK family protein 749974..750324 Desulfotomaculum ruminis DSM 2154 10737107 YP_004544306.1 CDS Desru_0737 NC_015589.1 750381 751079 D PFAM: peptidase C26; KEGG: drm:Dred_2893 peptidase C26; peptidase C26 750381..751079 Desulfotomaculum ruminis DSM 2154 10737108 YP_004544307.1 CDS Desru_0738 NC_015589.1 751114 752265 D PFAM: amidohydrolase; KEGG: drm:Dred_2892 amidohydrolase; amidohydrolase 751114..752265 Desulfotomaculum ruminis DSM 2154 10737109 YP_004544308.1 CDS Desru_0739 NC_015589.1 752399 752806 D KEGG: drm:Dred_2891 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 752399..752806 Desulfotomaculum ruminis DSM 2154 10737110 YP_004544309.1 CDS Desru_0740 NC_015589.1 753407 753913 D PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: drm:Dred_2888 hypothetical protein; hypothetical protein 753407..753913 Desulfotomaculum ruminis DSM 2154 10737111 YP_004544310.1 CDS Desru_0741 NC_015589.1 753894 754607 D PFAM: peptidase M22 glycoprotease; KEGG: drm:Dred_2887 peptidase M22, glycoprotease; peptidase M22 glycoprotease 753894..754607 Desulfotomaculum ruminis DSM 2154 10737112 YP_004544311.1 CDS Desru_0742 NC_015589.1 754608 755141 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: drm:Dred_2886 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 754608..755141 Desulfotomaculum ruminis DSM 2154 10737113 YP_004544312.1 CDS Desru_0743 NC_015589.1 755116 756198 D TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: drm:Dred_2885 metalloendopeptidase glycoprotease family; PFAM: peptidase M22 glycoprotease; metalloendopeptidase glycoprotease family 755116..756198 Desulfotomaculum ruminis DSM 2154 10737114 YP_004544313.1 CDS Desru_0744 NC_015589.1 756445 757749 D KEGG: drm:Dred_2884 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase 756445..757749 Desulfotomaculum ruminis DSM 2154 10737115 YP_004544314.1 CDS Desru_0745 NC_015589.1 757776 758207 D PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_2883 amino acid-binding ACT domain-containing protein; amino acid-binding ACT domain-containing protein 757776..758207 Desulfotomaculum ruminis DSM 2154 10737116 YP_004544315.1 CDS Desru_0746 NC_015589.1 758309 758911 D KEGG: drm:Dred_2882 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 758309..758911 Desulfotomaculum ruminis DSM 2154 10737117 YP_004544316.1 CDS Desru_0747 NC_015589.1 758995 760437 R PFAM: protein of unknown function DUF583; KEGG: hmu:Hmuk_1143 protein of unknown function DUF583; hypothetical protein complement(758995..760437) Desulfotomaculum ruminis DSM 2154 10737118 YP_004544317.1 CDS Desru_0748 NC_015589.1 760425 761111 R KEGG: nth:Nther_1893 putative transmembrane anti-sigma factor; hypothetical protein complement(760425..761111) Desulfotomaculum ruminis DSM 2154 10737119 YP_004544318.1 CDS Desru_0749 NC_015589.1 761086 761676 R KEGG: sth:STH845 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 family RNA polymerase sigma factor complement(761086..761676) Desulfotomaculum ruminis DSM 2154 10737120 YP_004544319.1 CDS Desru_0750 NC_015589.1 761839 763323 R PFAM: Radical SAM domain protein; KEGG: drm:Dred_2881 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; coproporphyrinogen dehydrogenase complement(761839..763323) Desulfotomaculum ruminis DSM 2154 10737121 YP_004544320.1 CDS Desru_0751 NC_015589.1 763472 763651 D KEGG: drm:Dred_2880 hypothetical protein; hypothetical protein 763472..763651 Desulfotomaculum ruminis DSM 2154 10737122 YP_004544321.1 CDS Desru_0752 NC_015589.1 763666 764892 D KEGG: drm:Dred_2879 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein 763666..764892 Desulfotomaculum ruminis DSM 2154 10737123 YP_004544322.1 CDS Desru_0753 NC_015589.1 764956 766890 D KEGG: drm:Dred_2878 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein 764956..766890 Desulfotomaculum ruminis DSM 2154 10737124 YP_004544323.1 CDS Desru_0754 NC_015589.1 766899 767273 D PFAM: regulatory protein LysR; KEGG: drm:Dred_2877 ModE family transcriptional regulator; regulatory protein LysR 766899..767273 Desulfotomaculum ruminis DSM 2154 10737125 YP_004544324.1 CDS Desru_0755 NC_015589.1 767378 768166 R KEGG: drm:Dred_2876 formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; formate dehydrogenase family accessory protein FdhD complement(767378..768166) Desulfotomaculum ruminis DSM 2154 10737126 YP_004544325.1 CDS Desru_0756 NC_015589.1 768229 768750 D KEGG: drm:Dred_2875 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein 768229..768750 Desulfotomaculum ruminis DSM 2154 10737127 YP_004544326.1 CDS Desru_0757 NC_015589.1 769041 769325 D PFAM: Chaperonin Cpn10; KEGG: drm:Dred_2874 chaperonin Cpn10; chaperonin Cpn10 769041..769325 Desulfotomaculum ruminis DSM 2154 10737128 YP_004544327.1 CDS Desru_0758 NC_015589.1 769374 771008 D KEGG: drm:Dred_2873 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL 769374..771008 Desulfotomaculum ruminis DSM 2154 10737129 YP_004544328.1 CDS Desru_0759 NC_015589.1 771344 772279 D KEGG: drm:Dred_2871 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; cysteine synthase A 771344..772279 Desulfotomaculum ruminis DSM 2154 10737130 YP_004544329.1 CDS Desru_0760 NC_015589.1 772273 774597 R TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; KEGG: dae:Dtox_1949 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase complement(772273..774597) Desulfotomaculum ruminis DSM 2154 10737131 YP_004544330.1 CDS Desru_0761 NC_015589.1 774911 776848 D KEGG: chy:CHY_0659 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate/CoA ligase 774911..776848 Desulfotomaculum ruminis DSM 2154 10737132 YP_004544331.1 CDS Desru_0762 NC_015589.1 776958 778325 D KEGG: dau:Daud_0468 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase internal region 776958..778325 Desulfotomaculum ruminis DSM 2154 10737133 YP_004544332.1 CDS Desru_0763 NC_015589.1 778338 779120 D KEGG: tjr:TherJR_0652 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; response regulator receiver 778338..779120 Desulfotomaculum ruminis DSM 2154 10737134 YP_004544333.1 CDS Desru_0764 NC_015589.1 779198 779569 D KEGG: drm:Dred_2868 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-(acyl-carrier-protein) synthase 779198..779569 Desulfotomaculum ruminis DSM 2154 10737135 YP_004544334.1 CDS Desru_0765 NC_015589.1 779574 781130 D KEGG: drm:Dred_2867 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031; carbohydrate kinase YjeF-like protein 779574..781130 Desulfotomaculum ruminis DSM 2154 10737136 YP_004544335.1 CDS Desru_0766 NC_015589.1 781312 782313 D SMART: TIR protein; KEGG: tcx:Tcr_0366 hypothetical protein; TIR protein 781312..782313 Desulfotomaculum ruminis DSM 2154 10737137 YP_004544336.1 CDS Desru_0767 NC_015589.1 782543 782923 D KEGG: bmq:BMQ_3622 endoribonuclease L-PSP, putative; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 782543..782923 Desulfotomaculum ruminis DSM 2154 10737138 YP_004544337.1 CDS Desru_0768 NC_015589.1 782972 783352 D TIGRFAM: methylglyoxal synthase; KEGG: cno:NT01CX_1696 methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase 782972..783352 Desulfotomaculum ruminis DSM 2154 10737139 YP_004544338.1 CDS Desru_0769 NC_015589.1 783692 784372 D KEGG: gym:GYMC10_3132 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 783692..784372 Desulfotomaculum ruminis DSM 2154 10737140 YP_004544339.1 CDS Desru_0770 NC_015589.1 784374 785759 D KEGG: gym:GYMC10_3131 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 784374..785759 Desulfotomaculum ruminis DSM 2154 10737141 YP_004544340.1 CDS Desru_0771 NC_015589.1 785866 786957 D KEGG: sli:Slin_2704 peptidase S9 prolyl oligopeptidase active site domain protein; hypothetical protein 785866..786957 Desulfotomaculum ruminis DSM 2154 10737142 YP_004544341.1 CDS Desru_0772 NC_015589.1 786998 787915 D KEGG: dae:Dtox_1722 hypothetical protein; hypothetical protein 786998..787915 Desulfotomaculum ruminis DSM 2154 10737143 YP_004544342.1 CDS Desru_0773 NC_015589.1 787937 788593 D KEGG: dhd:Dhaf_2143 hypothetical protein; hypothetical protein 787937..788593 Desulfotomaculum ruminis DSM 2154 10737144 YP_004544343.1 CDS Desru_0775 NC_015589.1 789426 789893 R KEGG: tjr:TherJR_0277 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(789426..789893) Desulfotomaculum ruminis DSM 2154 10737146 YP_004544344.1 CDS Desru_0776 NC_015589.1 790469 790978 D KEGG: drm:Dred_1591 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 790469..790978 Desulfotomaculum ruminis DSM 2154 10737148 YP_004544345.1 CDS Desru_0777 NC_015589.1 791185 792978 D KEGG: drm:Dred_0359 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; AAA ATPase; DNA mismatch repair protein MutS domain-containing protein 791185..792978 Desulfotomaculum ruminis DSM 2154 10737149 YP_004544346.1 CDS Desru_0778 NC_015589.1 793384 793950 D KEGG: str:Sterm_2301 hypothetical protein; hypothetical protein 793384..793950 Desulfotomaculum ruminis DSM 2154 10737150 YP_004544347.1 CDS Desru_0779 NC_015589.1 794021 795433 R PFAM: transposase IS4 family protein; KEGG: toc:Toce_1418 transposase IS4 family protein; transposase IS4 family protein complement(794021..795433) Desulfotomaculum ruminis DSM 2154 10737151 YP_004544348.1 CDS Desru_0780 NC_015589.1 795674 796189 D KEGG: bld:BLi02545 hypothetical protein; hypothetical protein 795674..796189 Desulfotomaculum ruminis DSM 2154 10737152 YP_004544349.1 CDS Desru_0782 NC_015589.1 797761 798873 D TIGRFAM: alanine racemase; KEGG: drm:Dred_2865 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 797761..798873 Desulfotomaculum ruminis DSM 2154 10737154 YP_004544350.1 CDS Desru_0783 NC_015589.1 798890 799462 D KEGG: drm:Dred_2864 Fis family transcriptional regulator; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver; ANTAR domain-containing protein 798890..799462 Desulfotomaculum ruminis DSM 2154 10737155 YP_004544351.1 CDS Desru_0784 NC_015589.1 799666 800004 D PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2863 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 799666..800004 Desulfotomaculum ruminis DSM 2154 10737156 YP_004544352.1 CDS Desru_0785 NC_015589.1 800283 801677 D KEGG: drm:Dred_2862 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; ammonium transporter 800283..801677 Desulfotomaculum ruminis DSM 2154 10737157 YP_004544353.1 CDS Desru_0786 NC_015589.1 801713 802051 D PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2861 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 801713..802051 Desulfotomaculum ruminis DSM 2154 10737158 YP_004544354.1 CDS Desru_0787 NC_015589.1 802206 804446 D PFAM: S-layer domain-containing protein; Propeptide PepSY amd peptidase M4; KEGG: drm:Dred_2860 S-layer domain-containing protein; S-layer protein 802206..804446 Desulfotomaculum ruminis DSM 2154 10737159 YP_004544355.1 CDS Desru_0788 NC_015589.1 804606 805484 D PFAM: glycosyl transferase family 2; KEGG: drm:Dred_2859 glycosyl transferase family protein; family 2 glycosyl transferase 804606..805484 Desulfotomaculum ruminis DSM 2154 10737160 YP_004544356.1 CDS Desru_0789 NC_015589.1 805586 806314 D PFAM: metallophosphoesterase; KEGG: drm:Dred_2858 metallophosphoesterase; metallophosphoesterase 805586..806314 Desulfotomaculum ruminis DSM 2154 10737161 YP_004544357.1 CDS Desru_0790 NC_015589.1 806434 807996 D KEGG: drm:Dred_2857 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein 806434..807996 Desulfotomaculum ruminis DSM 2154 10737162 YP_004544358.1 CDS Desru_0791 NC_015589.1 808100 809098 D TIGRFAM: metal dependent phophohydrolase; PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; KEGG: drm:Dred_2856 putative PAS/PAC sensor protein; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 808100..809098 Desulfotomaculum ruminis DSM 2154 10737163 YP_004544359.1 CDS Desru_0792 NC_015589.1 809254 809952 D PFAM: polysaccharide deacetylase; KEGG: gtn:GTNG_3405 polysaccharide deacetylase, putative; polysaccharide deacetylase 809254..809952 Desulfotomaculum ruminis DSM 2154 10737164 YP_004544360.1 CDS Desru_0793 NC_015589.1 810039 810428 D KEGG: drm:Dred_2855 hypothetical protein; hypothetical protein 810039..810428 Desulfotomaculum ruminis DSM 2154 10737165 YP_004544361.1 CDS Desru_0794 NC_015589.1 810514 811863 R KEGG: drm:Dred_2854 hypothetical protein; PFAM: protein of unknown function DUF815; AAA ATPase central domain protein; SMART: AAA ATPase; hypothetical protein complement(810514..811863) Desulfotomaculum ruminis DSM 2154 10737166 YP_004544362.1 CDS Desru_0796 NC_015589.1 814530 819740 D PFAM: FMN-binding domain protein; S-layer domain-containing protein; KEGG: cce:Ccel_2338 hypothetical protein; FMN-binding domain-containing protein 814530..819740 Desulfotomaculum ruminis DSM 2154 10737168 YP_004544363.1 CDS Desru_0797 NC_015589.1 819863 820918 D PFAM: ApbE family lipoprotein; KEGG: swo:Swol_1956 thiamine biosynthesis lipoprotein; ApbE family lipoprotein 819863..820918 Desulfotomaculum ruminis DSM 2154 10737169 YP_004544364.1 CDS Desru_0798 NC_015589.1 820940 821320 D PFAM: protein of unknown function DUF1312; KEGG: clj:CLJU_c11430 hypothetical protein; hypothetical protein 820940..821320 Desulfotomaculum ruminis DSM 2154 10737170 YP_004544365.1 CDS Desru_0799 NC_015589.1 821347 821856 D PFAM: Heptaprenyl diphosphate synthase component I; KEGG: ctc:CTC01025 heptaprenyl diphosphate synthase component I; heptaprenyl diphosphate synthase component I 821347..821856 Desulfotomaculum ruminis DSM 2154 10737171 YP_004544366.1 CDS Desru_0800 NC_015589.1 822008 822802 R PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region; integrase catalytic subunit complement(822008..822802) Desulfotomaculum ruminis DSM 2154 10737172 YP_004544367.1 CDS Desru_0801 NC_015589.1 822886 823569 R KEGG: toc:Toce_1956 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(822886..823569) Desulfotomaculum ruminis DSM 2154 10737173 YP_004544368.1 CDS Desru_0802 NC_015589.1 824032 824415 D PFAM: helix-turn-helix HxlR type; KEGG: dhd:Dhaf_0518 transcriptional regulator, HxlR family; helix-turn-helix HxlR type 824032..824415 Desulfotomaculum ruminis DSM 2154 10737174 YP_004544369.1 CDS Desru_0803 NC_015589.1 824535 824825 D KEGG: dhd:Dhaf_0517 hypothetical protein; hypothetical protein 824535..824825 Desulfotomaculum ruminis DSM 2154 10737175 YP_004544370.1 CDS Desru_0804 NC_015589.1 824905 825852 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mgm:Mmc1_3048 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 824905..825852 Desulfotomaculum ruminis DSM 2154 10737176 YP_004544371.1 CDS Desru_0806 NC_015589.1 827671 828009 R PFAM: transcriptional regulator PadR family protein; KEGG: amt:Amet_1565 PadR-like family transcriptional regulator; PadR family transcriptional regulator complement(827671..828009) Desulfotomaculum ruminis DSM 2154 10737178 YP_004544372.1 CDS Desru_0807 NC_015589.1 828342 828698 R PFAM: helix-turn-helix HxlR type; KEGG: toc:Toce_1961 transcriptional regulator; helix-turn-helix HxlR type complement(828342..828698) Desulfotomaculum ruminis DSM 2154 10737179 YP_004544373.1 CDS Desru_0808 NC_015589.1 828811 829206 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ttm:Tthe_0878 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 828811..829206 Desulfotomaculum ruminis DSM 2154 10737180 YP_004544374.1 CDS Desru_0809 NC_015589.1 829415 830752 D PFAM: flagellin domain protein; KEGG: cbk:CLL_A3427 flagellin; flagellin domain-containing protein 829415..830752 Desulfotomaculum ruminis DSM 2154 10737181 YP_004544375.1 CDS Desru_0810 NC_015589.1 831104 832939 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: pth:PTH_1778 membrane signaling protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS sensor protein 831104..832939 Desulfotomaculum ruminis DSM 2154 10737182 YP_004544376.1 CDS Desru_0811 NC_015589.1 833085 833201 D hypothetical protein 833085..833201 Desulfotomaculum ruminis DSM 2154 10737183 YP_004544377.1 CDS Desru_0812 NC_015589.1 833290 833796 R KEGG: drm:Dred_2848 hypothetical protein; hypothetical protein complement(833290..833796) Desulfotomaculum ruminis DSM 2154 10737184 YP_004544378.1 CDS Desru_0813 NC_015589.1 834162 835646 D KEGG: dae:Dtox_0049 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; sigma-54 factor interaction domain-containing protein 834162..835646 Desulfotomaculum ruminis DSM 2154 10737185 YP_004544379.1 CDS Desru_0814 NC_015589.1 835693 836349 D KEGG: drm:Dred_1262 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; cyclic nucleotide-binding protein 835693..836349 Desulfotomaculum ruminis DSM 2154 10737186 YP_004544380.1 CDS Desru_0815 NC_015589.1 836569 838077 D PFAM: sodium/sulphate symporter; KEGG: dau:Daud_0787 sodium/sulphate symporter; sodium/sulfate symporter 836569..838077 Desulfotomaculum ruminis DSM 2154 10737187 YP_004544381.1 CDS Desru_0816 NC_015589.1 838094 839854 D PFAM: HI0933 family protein; KEGG: dau:Daud_0788 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; hypothetical protein 838094..839854 Desulfotomaculum ruminis DSM 2154 10737188 YP_004544382.1 CDS Desru_0817 NC_015589.1 839872 840177 D KEGG: dau:Daud_0789 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 839872..840177 Desulfotomaculum ruminis DSM 2154 10737189 YP_004544383.1 CDS Desru_0818 NC_015589.1 840365 841387 D PFAM: S-layer domain-containing protein; KEGG: swo:Swol_1184 hypothetical protein; S-layer protein 840365..841387 Desulfotomaculum ruminis DSM 2154 10737190 YP_004544384.1 CDS Desru_0819 NC_015589.1 841498 842625 R KEGG: drm:Dred_2826 hypothetical protein; hypothetical protein complement(841498..842625) Desulfotomaculum ruminis DSM 2154 10737191 YP_004544385.1 CDS Desru_0820 NC_015589.1 842784 843209 R KEGG: dau:Daud_1560 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW domain-containing protein complement(842784..843209) Desulfotomaculum ruminis DSM 2154 10737192 YP_004544386.1 CDS Desru_0821 NC_015589.1 843211 844818 R KEGG: drm:Dred_2263 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein complement(843211..844818) Desulfotomaculum ruminis DSM 2154 10737193 YP_004544387.1 CDS Desru_0822 NC_015589.1 844860 847709 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: pin:Ping_0949 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase complement(844860..847709) Desulfotomaculum ruminis DSM 2154 10737194 YP_004544388.1 CDS Desru_0823 NC_015589.1 848219 850069 R TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: drm:Dred_2812 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase complement(848219..850069) Desulfotomaculum ruminis DSM 2154 10737195 YP_004544389.1 CDS Desru_0824 NC_015589.1 850505 851080 D KEGG: drm:Dred_2808 response regulator receiver/ANTAR domain-containing protein; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver; ANTAR domain-containing protein 850505..851080 Desulfotomaculum ruminis DSM 2154 10737196 YP_004544390.1 CDS Desru_0825 NC_015589.1 851322 852656 D TIGRFAM: glutamine synthetase, type I; KEGG: drm:Dred_2807 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase type I 851322..852656 Desulfotomaculum ruminis DSM 2154 10737197 YP_004544391.1 CDS Desru_0826 NC_015589.1 852949 854283 D KEGG: drm:Dred_2806 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase type I 852949..854283 Desulfotomaculum ruminis DSM 2154 10737198 YP_004544392.1 CDS Desru_0827 NC_015589.1 854601 859211 D KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase 854601..859211 Desulfotomaculum ruminis DSM 2154 10737199 YP_004544393.1 CDS Desru_0828 NC_015589.1 859239 860723 D KEGG: drm:Dred_2804 glutamate synthases, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase NADH/NADPH small subunit 859239..860723 Desulfotomaculum ruminis DSM 2154 10737200 YP_004544394.1 CDS Desru_0829 NC_015589.1 860807 861601 R PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region; integrase catalytic subunit complement(860807..861601) Desulfotomaculum ruminis DSM 2154 10737201 YP_004544395.1 CDS Desru_0830 NC_015589.1 861685 862368 R KEGG: toc:Toce_1956 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(861685..862368) Desulfotomaculum ruminis DSM 2154 10737202 YP_004544396.1 CDS Desru_0831 NC_015589.1 862622 862945 R KEGG: drm:Dred_2803 hypothetical protein; hypothetical protein complement(862622..862945) Desulfotomaculum ruminis DSM 2154 10737203 YP_004544397.1 CDS Desru_0832 NC_015589.1 863521 863655 D hypothetical protein 863521..863655 Desulfotomaculum ruminis DSM 2154 10737204 YP_004544398.1 CDS Desru_0833 NC_015589.1 863756 864064 R KEGG: drm:Dred_2802 hypothetical protein; hypothetical protein complement(863756..864064) Desulfotomaculum ruminis DSM 2154 10737205 YP_004544399.1 CDS Desru_0834 NC_015589.1 864211 864480 D KEGG: drm:Dred_2801 hypothetical protein; hypothetical protein 864211..864480 Desulfotomaculum ruminis DSM 2154 10737206 YP_004544400.1 CDS Desru_0835 NC_015589.1 864571 865068 D KEGG: drm:Dred_2800 hypothetical protein; hypothetical protein 864571..865068 Desulfotomaculum ruminis DSM 2154 10737207 YP_004544401.1 CDS Desru_0836 NC_015589.1 865084 865782 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: drm:Dred_2799 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 865084..865782 Desulfotomaculum ruminis DSM 2154 10737208 YP_004544402.1 CDS Desru_0837 NC_015589.1 865820 866641 R KEGG: drm:Dred_2798 cell wall hydrolase, SleB; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; cell wall hydrolase SleB complement(865820..866641) Desulfotomaculum ruminis DSM 2154 10737209 YP_004544403.1 CDS Desru_0838 NC_015589.1 866925 867380 D PFAM: Lactate/malate dehydrogenase; KEGG: drm:Dred_2797 L-lactate dehydrogenase; lactate/malate dehydrogenase 866925..867380 Desulfotomaculum ruminis DSM 2154 10737210 YP_004544404.1 CDS Desru_0839 NC_015589.1 867738 869024 D PFAM: MscS Mechanosensitive ion channel; KEGG: pjd:Pjdr2_0549 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 867738..869024 Desulfotomaculum ruminis DSM 2154 10737211 YP_004544405.1 CDS Desru_0841 NC_015589.1 869317 870051 R KEGG: dsy:DSY2713 hypothetical protein; hypothetical protein complement(869317..870051) Desulfotomaculum ruminis DSM 2154 10737213 YP_004544406.1 CDS Desru_0842 NC_015589.1 870055 870807 R KEGG: dhd:Dhaf_3871 hypothetical protein; hypothetical protein complement(870055..870807) Desulfotomaculum ruminis DSM 2154 10737214 YP_004544407.1 CDS Desru_0843 NC_015589.1 870804 871718 R KEGG: dsy:DSY2711 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(870804..871718) Desulfotomaculum ruminis DSM 2154 10737215 YP_004544408.1 CDS Desru_0844 NC_015589.1 871865 872584 D KEGG: dhd:Dhaf_3869 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 871865..872584 Desulfotomaculum ruminis DSM 2154 10737216 YP_004544409.1 CDS Desru_0845 NC_015589.1 872581 873942 D KEGG: dhd:Dhaf_3868 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein 872581..873942 Desulfotomaculum ruminis DSM 2154 10737217 YP_004544410.1 CDS Desru_0846 NC_015589.1 874087 874905 R PFAM: protein of unknown function DUF1113; KEGG: cpf:CPF_1398 hypothetical protein; hypothetical protein complement(874087..874905) Desulfotomaculum ruminis DSM 2154 10737218 YP_004544411.1 CDS Desru_0848 NC_015589.1 876047 876628 R PFAM: regulatory protein TetR; KEGG: tte:TTE1839 transcriptional regulator; regulatory protein TetR complement(876047..876628) Desulfotomaculum ruminis DSM 2154 10737220 YP_004544412.1 CDS Desru_0849 NC_015589.1 877181 877627 R PFAM: heat shock protein Hsp20; KEGG: apv:Apar_0104 heat shock protein HSP20; heat shock protein Hsp20 complement(877181..877627) Desulfotomaculum ruminis DSM 2154 10737221 YP_004544413.1 CDS Desru_0850 NC_015589.1 878964 879404 D KEGG: rci:RRC2 redox-active protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 878964..879404 Desulfotomaculum ruminis DSM 2154 10737223 YP_004544414.1 CDS Desru_0851 NC_015589.1 879493 880029 R KEGG: cac:CA_C0449 hypothetical protein; hypothetical protein complement(879493..880029) Desulfotomaculum ruminis DSM 2154 10737224 YP_004544415.1 CDS Desru_0852 NC_015589.1 880192 881025 R KEGG: drm:Dred_0385 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(880192..881025) Desulfotomaculum ruminis DSM 2154 10737225 YP_004544416.1 CDS Desru_0853 NC_015589.1 881185 881427 R PFAM: Protein of unknown function DUF2164; KEGG: drm:Dred_2026 hypothetical protein; hypothetical protein complement(881185..881427) Desulfotomaculum ruminis DSM 2154 10737226 YP_004544417.1 CDS Desru_0854 NC_015589.1 881600 882379 R KEGG: drt:Dret_1645 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(881600..882379) Desulfotomaculum ruminis DSM 2154 10737227 YP_004544418.1 CDS Desru_0855 NC_015589.1 882372 883175 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drt:Dret_1646 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(882372..883175) Desulfotomaculum ruminis DSM 2154 10737228 YP_004544419.1 CDS Desru_0856 NC_015589.1 883176 884198 R SMART: extracellular solute-binding protein family 3; KEGG: slp:Slip_1328 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; family 3 extracellular solute-binding protein complement(883176..884198) Desulfotomaculum ruminis DSM 2154 10737229 YP_004544420.1 CDS Desru_0857 NC_015589.1 884561 886258 D KEGG: drm:Dred_2745 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; Na/Pi-cotransporter II-like protein 884561..886258 Desulfotomaculum ruminis DSM 2154 10737230 YP_004544421.1 CDS Desru_0858 NC_015589.1 886416 887039 D KEGG: tjr:TherJR_2968 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding protein 886416..887039 Desulfotomaculum ruminis DSM 2154 10737231 YP_004544422.1 CDS Desru_0859 NC_015589.1 887130 889061 D TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: tjr:TherJR_1937 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; carbon-monoxide dehydrogenase catalytic subunit 887130..889061 Desulfotomaculum ruminis DSM 2154 10737232 YP_004544423.1 CDS Desru_0860 NC_015589.1 889081 889878 D KEGG: chy:CHY_1834 CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC; CO dehydrogenase/acetyl-CoA synthase complex accessory protein CooC 889081..889878 Desulfotomaculum ruminis DSM 2154 10737233 YP_004544424.1 CDS Desru_0861 NC_015589.1 889995 890591 D PFAM: nitroreductase; KEGG: ckr:CKR_1145 hypothetical protein; nitroreductase 889995..890591 Desulfotomaculum ruminis DSM 2154 10737234 YP_004544425.1 CDS Desru_0862 NC_015589.1 890668 891450 D PFAM: protein of unknown function DUF45; KEGG: drm:Dred_2744 hypothetical protein; hypothetical protein 890668..891450 Desulfotomaculum ruminis DSM 2154 10737235 YP_004544426.1 CDS Desru_0863 NC_015589.1 891488 892327 R KEGG: drm:Dred_2743 hypothetical protein; hypothetical protein complement(891488..892327) Desulfotomaculum ruminis DSM 2154 10737236 YP_004544427.1 CDS Desru_0864 NC_015589.1 892619 893869 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ckr:CKR_3387 hypothetical protein; transposase IS116/IS110/IS902 family protein 892619..893869 Desulfotomaculum ruminis DSM 2154 10737237 YP_004544428.1 CDS Desru_0865 NC_015589.1 894250 895629 D PFAM: sodium:neurotransmitter symporter; KEGG: drm:Dred_2742 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter 894250..895629 Desulfotomaculum ruminis DSM 2154 10737238 YP_004544429.1 CDS Desru_0866 NC_015589.1 895669 896358 R KEGG: drm:Dred_2741 phospholipase C zinc-binding protein; PFAM: phospholipase C zinc-binding protein; SMART: phospholipase C zinc-binding protein; phospholipase C zinc-binding protein complement(895669..896358) Desulfotomaculum ruminis DSM 2154 10737239 YP_004544430.1 CDS Desru_0867 NC_015589.1 896653 897303 D KEGG: drm:Dred_2739 NLP/P60 protein; PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; NLP/P60 protein 896653..897303 Desulfotomaculum ruminis DSM 2154 10737240 YP_004544431.1 CDS Desru_0868 NC_015589.1 897410 898801 R PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2738 S-layer domain-containing protein; S-layer protein complement(897410..898801) Desulfotomaculum ruminis DSM 2154 10737241 YP_004544432.1 CDS Desru_0869 NC_015589.1 899159 900517 D KEGG: drm:Dred_2737 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein 899159..900517 Desulfotomaculum ruminis DSM 2154 10737242 YP_004544433.1 CDS Desru_0870 NC_015589.1 900719 901234 D PFAM: Lipoprotein LpqB, GerMN domain; KEGG: drm:Dred_2736 hypothetical protein; Lipoprotein LpqB GerMN domain-containing protein 900719..901234 Desulfotomaculum ruminis DSM 2154 10737243 YP_004544434.1 CDS Desru_0871 NC_015589.1 901598 902764 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; KEGG: dae:Dtox_1659 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; metal dependent phosphohydrolase 901598..902764 Desulfotomaculum ruminis DSM 2154 10737244 YP_004544435.1 CDS Desru_0872 NC_015589.1 903012 903935 D KEGG: drm:Dred_2726 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein 903012..903935 Desulfotomaculum ruminis DSM 2154 10737245 YP_004544436.1 CDS Desru_0873 NC_015589.1 903965 904186 D PFAM: FeoA family protein; KEGG: drm:Dred_2725 FeoA family protein; FeoA family protein 903965..904186 Desulfotomaculum ruminis DSM 2154 10737246 YP_004544437.1 CDS Desru_0874 NC_015589.1 904209 904436 D PFAM: FeoA family protein; KEGG: dae:Dtox_1656 FeoA family protein; FeoA family protein 904209..904436 Desulfotomaculum ruminis DSM 2154 10737247 YP_004544438.1 CDS Desru_0875 NC_015589.1 904452 906347 D KEGG: drm:Dred_2723 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; ferrous iron transport protein B 904452..906347 Desulfotomaculum ruminis DSM 2154 10737248 YP_004544439.1 CDS Desru_0876 NC_015589.1 906381 906587 D KEGG: dae:Dtox_1658 hypothetical protein; hypothetical protein 906381..906587 Desulfotomaculum ruminis DSM 2154 10737249 YP_004544440.1 CDS Desru_0877 NC_015589.1 906728 906862 D KEGG: bha:BH2016 hypothetical protein; hypothetical protein 906728..906862 Desulfotomaculum ruminis DSM 2154 10737250 YP_004544441.1 CDS Desru_0878 NC_015589.1 906910 907452 D KEGG: ckr:CKR_1037 hypothetical protein; hypothetical protein 906910..907452 Desulfotomaculum ruminis DSM 2154 10737251 YP_004544442.1 CDS Desru_0879 NC_015589.1 907456 907959 D KEGG: lba:Lebu_2038 hypothetical protein; hypothetical protein 907456..907959 Desulfotomaculum ruminis DSM 2154 10737252 YP_004544443.1 CDS Desru_0880 NC_015589.1 907961 910081 D KEGG: fnu:FN1190 cadmium-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 907961..910081 Desulfotomaculum ruminis DSM 2154 10737253 YP_004544444.1 CDS Desru_0881 NC_015589.1 910078 910680 D KEGG: bmd:BMD_1818 hypothetical protein; hypothetical protein 910078..910680 Desulfotomaculum ruminis DSM 2154 10737254 YP_004544445.1 CDS Desru_0882 NC_015589.1 910699 910914 D KEGG: bmq:BMQ_pBM40025 hypothetical protein; hypothetical protein 910699..910914 Desulfotomaculum ruminis DSM 2154 10737255 YP_004544446.1 CDS Desru_0883 NC_015589.1 911215 911484 D KEGG: drm:Dred_2722 hypothetical protein; hypothetical protein 911215..911484 Desulfotomaculum ruminis DSM 2154 10737256 YP_004544447.1 CDS Desru_0884 NC_015589.1 911811 914105 D TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: ckr:CKR_1636 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 911811..914105 Desulfotomaculum ruminis DSM 2154 10737257 YP_004544448.1 CDS Desru_0885 NC_015589.1 914181 914990 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aoe:Clos_2696 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 914181..914990 Desulfotomaculum ruminis DSM 2154 10737258 YP_004544449.1 CDS Desru_0887 NC_015589.1 915706 917292 D KEGG: gsu:GSU1030 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein 915706..917292 Desulfotomaculum ruminis DSM 2154 10737260 YP_004544450.1 CDS Desru_0888 NC_015589.1 917391 918101 R KEGG: drm:Dred_2735 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-2 C(20)-methyltransferase complement(917391..918101) Desulfotomaculum ruminis DSM 2154 10737261 YP_004544451.1 CDS Desru_0889 NC_015589.1 918120 918944 R KEGG: drm:Dred_2730 anaerobic cobalt chelatase; PFAM: anaerobic cobalt chelatase; Sirohydrochlorin cobaltochelatase complement(918120..918944) Desulfotomaculum ruminis DSM 2154 10737262 YP_004544452.1 CDS Desru_0890 NC_015589.1 919627 920685 D TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: drm:Dred_2728 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 919627..920685 Desulfotomaculum ruminis DSM 2154 10737263 YP_004544453.1 CDS Desru_0891 NC_015589.1 920921 921409 D KEGG: drm:Dred_2721 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; iron dependent repressor 920921..921409 Desulfotomaculum ruminis DSM 2154 10737264 YP_004544454.1 CDS Desru_0892 NC_015589.1 921406 922788 R PFAM: Ferrous iron transport B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport protein B domain-containing protein; KEGG: drm:Dred_2720 ferrous iron transport B domain-containing protein; ferrous iron transport B domain-containing protein complement(921406..922788) Desulfotomaculum ruminis DSM 2154 10737265 YP_004544455.1 CDS Desru_0893 NC_015589.1 922785 923525 R KEGG: drm:Dred_2719 GTP-binding protein, HSR1-related; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; small GTP-binding protein complement(922785..923525) Desulfotomaculum ruminis DSM 2154 10737266 YP_004544456.1 CDS Desru_0894 NC_015589.1 923528 923791 R PFAM: FeoA family protein; KEGG: drm:Dred_2718 FeoA family protein; FeoA family protein complement(923528..923791) Desulfotomaculum ruminis DSM 2154 10737267 YP_004544457.1 CDS Desru_0895 NC_015589.1 924158 925318 D PFAM: YibE/F family protein; KEGG: drm:Dred_2717 YibE/F family protein; hypothetical protein 924158..925318 Desulfotomaculum ruminis DSM 2154 10737268 YP_004544458.1 CDS Desru_0896 NC_015589.1 925434 926006 D KEGG: drm:Dred_2722 hypothetical protein; hypothetical protein 925434..926006 Desulfotomaculum ruminis DSM 2154 10737269 YP_004544459.1 CDS Desru_0897 NC_015589.1 926129 926872 R KEGG: drm:Dred_2716 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(926129..926872) Desulfotomaculum ruminis DSM 2154 10737270 YP_004544460.1 CDS Desru_0898 NC_015589.1 927121 928509 D KEGG: drm:Dred_2715 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid a,c-diamide synthase 927121..928509 Desulfotomaculum ruminis DSM 2154 10737271 YP_004544461.1 CDS Desru_0899 NC_015589.1 928502 929620 D KEGG: drm:Dred_2714 cobalt-precorrin-6A synthase; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; cobalamin biosynthesis protein CbiD 928502..929620 Desulfotomaculum ruminis DSM 2154 10737272 YP_004544462.1 CDS Desru_0900 NC_015589.1 929599 930225 D KEGG: drm:Dred_2713 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 929599..930225 Desulfotomaculum ruminis DSM 2154 10737273 YP_004544463.1 CDS Desru_0901 NC_015589.1 930218 930817 D KEGG: drm:Dred_2712 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Methyltransferase type 12; precorrin-6y C5,15-methyltransferase subunit CbiT 930218..930817 Desulfotomaculum ruminis DSM 2154 10737274 YP_004544464.1 CDS Desru_0902 NC_015589.1 930927 931670 D TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: drm:Dred_2711 precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 930927..931670 Desulfotomaculum ruminis DSM 2154 10737275 YP_004544465.1 CDS Desru_0903 NC_015589.1 931651 932721 D PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: drm:Dred_2710 cobalamin (vitamin B12) biosynthesis CbiG protein; cobalamin (vitamin B12) biosynthesis protein CbiG 931651..932721 Desulfotomaculum ruminis DSM 2154 10737276 YP_004544466.1 CDS Desru_0904 NC_015589.1 932709 933416 D KEGG: drm:Dred_2709 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-3B C(17)-methyltransferase 932709..933416 Desulfotomaculum ruminis DSM 2154 10737277 YP_004544467.1 CDS Desru_0905 NC_015589.1 933413 934186 D KEGG: drm:Dred_2708 precorrin-6X reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 933413..934186 Desulfotomaculum ruminis DSM 2154 10737278 YP_004544468.1 CDS Desru_0906 NC_015589.1 934200 934568 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: drm:Dred_2707 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 934200..934568 Desulfotomaculum ruminis DSM 2154 10737279 YP_004544469.1 CDS Desru_0907 NC_015589.1 934571 935197 D KEGG: drm:Dred_2706 precorrin-8X methylmutase CbiC/CobH; PFAM: Precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase 934571..935197 Desulfotomaculum ruminis DSM 2154 10737280 YP_004544470.1 CDS Desru_0908 NC_015589.1 935240 936781 D KEGG: drm:Dred_2705 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyric acid synthase CobQ 935240..936781 Desulfotomaculum ruminis DSM 2154 10737281 YP_004544471.1 CDS Desru_0909 NC_015589.1 936778 937740 D KEGG: drm:Dred_2704 cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CobD 936778..937740 Desulfotomaculum ruminis DSM 2154 10737282 YP_004544472.1 CDS Desru_0910 NC_015589.1 937794 938540 D KEGG: drm:Dred_2703 cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 937794..938540 Desulfotomaculum ruminis DSM 2154 10737283 YP_004544473.1 CDS Desru_0911 NC_015589.1 938492 939403 D PFAM: GHMP kinase; KEGG: drm:Dred_2702 GHMP kinase; GHMP kinase 938492..939403 Desulfotomaculum ruminis DSM 2154 10737284 YP_004544474.1 CDS Desru_0912 NC_015589.1 939417 940505 D KEGG: drm:Dred_2701 putative L-threonine-O-3-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; L-threonine-O-3-phosphate decarboxylase 939417..940505 Desulfotomaculum ruminis DSM 2154 10737285 YP_004544475.1 CDS Desru_0913 NC_015589.1 940803 942026 D SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: drm:Dred_2700 diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 940803..942026 Desulfotomaculum ruminis DSM 2154 10737286 YP_004544476.1 CDS Desru_0914 NC_015589.1 942152 944587 D KEGG: pth:PTH_2016 hypothetical protein; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; DEAD/DEAH box helicase 942152..944587 Desulfotomaculum ruminis DSM 2154 10737287 YP_004544477.1 CDS Desru_0915 NC_015589.1 944547 946103 D KEGG: dae:Dtox_2083 DSH domain protein; PFAM: DSH domain protein; helicase domain protein; SMART: helicase domain protein; DSH domain-containing protein 944547..946103 Desulfotomaculum ruminis DSM 2154 10737288 YP_004544478.1 CDS Desru_0916 NC_015589.1 946165 946905 R PFAM: protein of unknown function DUF541; KEGG: drm:Dred_1567 hypothetical protein; hypothetical protein complement(946165..946905) Desulfotomaculum ruminis DSM 2154 10737289 YP_004544479.1 CDS Desru_0917 NC_015589.1 947226 947975 D PFAM: SCP-like extracellular; KEGG: drm:Dred_1374 allergen V5/TPX-1 family protein; SCP-like extracellular protein 947226..947975 Desulfotomaculum ruminis DSM 2154 10737290 YP_004544480.1 CDS Desru_0918 NC_015589.1 948261 948581 R KEGG: drm:Dred_2697 hypothetical protein; hypothetical protein complement(948261..948581) Desulfotomaculum ruminis DSM 2154 10737291 YP_004544481.1 CDS Desru_0919 NC_015589.1 948759 950153 R PFAM: S-layer domain-containing protein; KEGG: mta:Moth_2088 hypothetical protein; S-layer protein complement(948759..950153) Desulfotomaculum ruminis DSM 2154 10737292 YP_004544482.1 CDS Desru_0920 NC_015589.1 950327 950719 D KEGG: drm:Dred_2696 hypothetical protein; hypothetical protein 950327..950719 Desulfotomaculum ruminis DSM 2154 10737293 YP_004544483.1 CDS Desru_0921 NC_015589.1 950797 951726 D KEGG: drm:Dred_2695 hypothetical protein; hypothetical protein 950797..951726 Desulfotomaculum ruminis DSM 2154 10737294 YP_004544484.1 CDS Desru_0922 NC_015589.1 951985 952914 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: drm:Dred_2694 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(951985..952914) Desulfotomaculum ruminis DSM 2154 10737295 YP_004544485.1 CDS Desru_0923 NC_015589.1 953256 955031 D PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; KEGG: drm:Dred_2693 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SH3 domain protein; N-acetylmuramoyl-L-alanine amidase 953256..955031 Desulfotomaculum ruminis DSM 2154 10737296 YP_004544486.1 CDS Desru_0924 NC_015589.1 955402 955836 D TIGRFAM: methylaspartate mutase, S subunit; KEGG: drm:Dred_2692 methylaspartate mutase subunit S; PFAM: cobalamin B12-binding domain protein; methylaspartate mutase S subunit 955402..955836 Desulfotomaculum ruminis DSM 2154 10737297 YP_004544487.1 CDS Desru_0925 NC_015589.1 955848 957257 D KEGG: drm:Dred_2691 glutamate mutase, MutL; glutamate mutase MutL 955848..957257 Desulfotomaculum ruminis DSM 2154 10737298 YP_004544488.1 CDS Desru_0926 NC_015589.1 957263 958714 D TIGRFAM: methylaspartate mutase, E subunit; KEGG: drm:Dred_2690 methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; methylaspartate mutase E subunit 957263..958714 Desulfotomaculum ruminis DSM 2154 10737299 YP_004544489.1 CDS Desru_0927 NC_015589.1 958745 959992 D TIGRFAM: methylaspartate ammonia-lyase; KEGG: drm:Dred_2689 methylaspartate ammonia-lyase; PFAM: methylaspartate ammonia-lyase; methylaspartate ammonia-lyase 958745..959992 Desulfotomaculum ruminis DSM 2154 10737300 YP_004544490.1 CDS Desru_0928 NC_015589.1 960015 960977 D PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_2688 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 960015..960977 Desulfotomaculum ruminis DSM 2154 10737301 YP_004544491.1 CDS Desru_0929 NC_015589.1 960987 961739 D KEGG: drm:Dred_2687 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 960987..961739 Desulfotomaculum ruminis DSM 2154 10737302 YP_004544492.1 CDS Desru_0930 NC_015589.1 961792 962553 D KEGG: drm:Dred_2686 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 961792..962553 Desulfotomaculum ruminis DSM 2154 10737303 YP_004544493.1 CDS Desru_0931 NC_015589.1 962565 963530 D KEGG: drm:Dred_2685 hypothetical protein; hypothetical protein 962565..963530 Desulfotomaculum ruminis DSM 2154 10737304 YP_004544494.1 CDS Desru_0932 NC_015589.1 963542 964288 D TIGRFAM: ribonuclease PH; KEGG: drm:Dred_2684 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 963542..964288 Desulfotomaculum ruminis DSM 2154 10737305 YP_004544495.1 CDS Desru_0933 NC_015589.1 964298 964897 D KEGG: drm:Dred_2683 nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 964298..964897 Desulfotomaculum ruminis DSM 2154 10737306 YP_004544496.1 CDS Desru_0934 NC_015589.1 964900 965388 D KEGG: drm:Dred_2682 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase 964900..965388 Desulfotomaculum ruminis DSM 2154 10737307 YP_004544497.1 CDS Desru_0935 NC_015589.1 965683 965901 D KEGG: ppp:PHYPADRAFT_190424 hypothetical protein; hypothetical protein 965683..965901 Desulfotomaculum ruminis DSM 2154 10737309 YP_004544498.1 CDS Desru_0936 NC_015589.1 966136 966573 D KEGG: cce:Ccel_2418 hypothetical protein; hypothetical protein 966136..966573 Desulfotomaculum ruminis DSM 2154 10737310 YP_004544499.1 CDS Desru_0937 NC_015589.1 967298 967915 D KEGG: mtb:TBMG_02531 hypothetical protein; hypothetical protein 967298..967915 Desulfotomaculum ruminis DSM 2154 10737311 YP_004544500.1 CDS Desru_0938 NC_015589.1 967917 968606 D manually curated; PFAM: ABC transporter related; KEGG: drm:Dred_0318 ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 967917..968606 Desulfotomaculum ruminis DSM 2154 10737312 YP_004544501.1 CDS Desru_0939 NC_015589.1 968593 969873 D KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 968593..969873 Desulfotomaculum ruminis DSM 2154 10737313 YP_004544502.1 CDS Desru_0940 NC_015589.1 969878 971065 D PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein; hypothetical protein 969878..971065 Desulfotomaculum ruminis DSM 2154 10737314 YP_004544503.1 CDS Desru_0941 NC_015589.1 971079 972230 D KEGG: drm:Dred_0321 outer membrane protein-like protein; hypothetical protein 971079..972230 Desulfotomaculum ruminis DSM 2154 10737315 YP_004544504.1 CDS Desru_0942 NC_015589.1 972285 973607 R KEGG: bmq:BMQ_3911 two-component sensor histidine kinase CssS; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; ATP-binding protein complement(972285..973607) Desulfotomaculum ruminis DSM 2154 10737316 YP_004544505.1 CDS Desru_0943 NC_015589.1 973604 974272 R KEGG: bmd:BMD_3900 two-component response regulator CssR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(973604..974272) Desulfotomaculum ruminis DSM 2154 10737317 YP_004544506.1 CDS Desru_0944 NC_015589.1 974353 975186 R PFAM: Protein of unknown function DUF2089; Intron-encoded nuclease 2; KEGG: bwe:BcerKBAB4_4847 hypothetical protein; hypothetical protein complement(974353..975186) Desulfotomaculum ruminis DSM 2154 10737318 YP_004544507.1 CDS Desru_0945 NC_015589.1 975470 977047 D KEGG: adg:Adeg_1228 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein 975470..977047 Desulfotomaculum ruminis DSM 2154 10737319 YP_004544508.1 CDS Desru_0946 NC_015589.1 977241 978005 D KEGG: dae:Dtox_1727 hypothetical protein; hypothetical protein 977241..978005 Desulfotomaculum ruminis DSM 2154 10737320 YP_004544509.1 CDS Desru_0947 NC_015589.1 978109 979332 R KEGG: drm:Dred_2660 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; PAS fold-4 domain protein; PAS sensor protein complement(978109..979332) Desulfotomaculum ruminis DSM 2154 10737321 YP_004544510.1 CDS Desru_0948 NC_015589.1 979439 979711 R KEGG: drm:Dred_2659 hypothetical protein; hypothetical protein complement(979439..979711) Desulfotomaculum ruminis DSM 2154 10737322 YP_004544511.1 CDS Desru_0949 NC_015589.1 979864 980511 D PFAM: Like-Sm ribonucleoprotein core; KEGG: pth:PTH_0886 hypothetical protein; Sm ribonucleoprotein-like protein 979864..980511 Desulfotomaculum ruminis DSM 2154 10737323 YP_004544512.1 CDS Desru_0950 NC_015589.1 980542 981801 D PFAM: Radical SAM domain protein; KEGG: pth:PTH_0885 arylsulfatase regulator; radical SAM protein 980542..981801 Desulfotomaculum ruminis DSM 2154 10737324 YP_004544513.1 CDS Desru_0951 NC_015589.1 981986 982987 R PFAM: phosphate transporter; KEGG: drm:Dred_2658 phosphate transporter; phosphate transporter complement(981986..982987) Desulfotomaculum ruminis DSM 2154 10737325 YP_004544514.1 CDS Desru_0952 NC_015589.1 983008 983622 R PFAM: Putitive phosphate transport regulator; KEGG: drm:Dred_2657 hypothetical protein; putative phosphate transport regulator complement(983008..983622) Desulfotomaculum ruminis DSM 2154 10737326 YP_004544515.1 CDS Desru_0953 NC_015589.1 983899 984597 D KEGG: drm:Dred_2655 sporulation sigma factor SigK; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 family RNA polymerase sigma factor 983899..984597 Desulfotomaculum ruminis DSM 2154 10737327 YP_004544516.1 CDS Desru_0954 NC_015589.1 984757 985335 R PFAM: protein of unknown function DUF502; KEGG: drm:Dred_2747 hypothetical protein; hypothetical protein complement(984757..985335) Desulfotomaculum ruminis DSM 2154 10737328 YP_004544517.1 CDS Desru_0955 NC_015589.1 985968 986936 D PFAM: Bile acid:sodium symporter; KEGG: drm:Dred_0457 bile acid:sodium symporter; bile acid:sodium symporter 985968..986936 Desulfotomaculum ruminis DSM 2154 10737329 YP_004544518.1 CDS Desru_0956 NC_015589.1 987303 988715 D PFAM: transposase IS4 family protein; KEGG: toc:Toce_1418 transposase IS4 family protein; transposase IS4 family protein 987303..988715 Desulfotomaculum ruminis DSM 2154 10737330 YP_004544519.1 CDS Desru_0957 NC_015589.1 988849 990042 D KEGG: mta:Moth_1229 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 988849..990042 Desulfotomaculum ruminis DSM 2154 10737331 YP_004544520.1 CDS Desru_0958 NC_015589.1 990026 990346 D KEGG: pth:PTH_1497 hypothetical protein; hypothetical protein 990026..990346 Desulfotomaculum ruminis DSM 2154 10737332 YP_004544521.1 CDS Desru_0959 NC_015589.1 990470 990685 D KEGG: ttm:Tthe_2548 hypothetical protein; hypothetical protein 990470..990685 Desulfotomaculum ruminis DSM 2154 10737333 YP_004544522.1 CDS Desru_0960 NC_015589.1 990686 991774 R KEGG: lxx:Lxx12220 integral membrane protein; integral membrane protein complement(990686..991774) Desulfotomaculum ruminis DSM 2154 10737334 YP_004544523.1 CDS Desru_0961 NC_015589.1 992017 992154 R KEGG: sso:SSO2973 quinol oxidase-2, subunit I/III, cytochrome aa3 (SoxM); quinol oxidase-2 subunit I/III cytochrome aa3 complement(992017..992154) Desulfotomaculum ruminis DSM 2154 10737335 YP_004544524.1 CDS Desru_0962 NC_015589.1 992672 992785 R KEGG: eel:EUBELI_00684 hypothetical protein; hypothetical protein complement(992672..992785) Desulfotomaculum ruminis DSM 2154 10737336 YP_004544525.1 CDS Desru_0963 NC_015589.1 993139 994191 D PFAM: acyltransferase 3; KEGG: npu:Npun_F3800 acyltransferase 3; acyltransferase 3 993139..994191 Desulfotomaculum ruminis DSM 2154 10737337 YP_004544526.1 CDS Desru_0964 NC_015589.1 994444 995211 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aoe:Clos_0849 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(994444..995211) Desulfotomaculum ruminis DSM 2154 10737338 YP_004544527.1 CDS Desru_0965 NC_015589.1 995883 996251 D KEGG: drm:Dred_2579 hypothetical protein; hypothetical protein 995883..996251 Desulfotomaculum ruminis DSM 2154 10737340 YP_004544528.1 CDS Desru_0966 NC_015589.1 996388 996639 D KEGG: tet:TTHERM_00332110 hypothetical protein; hypothetical protein 996388..996639 Desulfotomaculum ruminis DSM 2154 10737341 YP_004544529.1 CDS Desru_0967 NC_015589.1 996731 997090 R KEGG: drm:Dred_2578 hypothetical protein; hypothetical protein complement(996731..997090) Desulfotomaculum ruminis DSM 2154 10737342 YP_004544530.1 CDS Desru_0968 NC_015589.1 997258 998079 D KEGG: drm:Dred_2577 HisJ family histidinol phosphate phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; HisJ family histidinol phosphate phosphatase 997258..998079 Desulfotomaculum ruminis DSM 2154 10737343 YP_004544531.1 CDS Desru_0970 NC_015589.1 998965 1000083 D KEGG: drm:Dred_1438 membrane protein-like protein; hypothetical protein 998965..1000083 Desulfotomaculum ruminis DSM 2154 10737345 YP_004544532.1 CDS Desru_0971 NC_015589.1 1000250 1000984 D KEGG: drm:Dred_2576 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 1000250..1000984 Desulfotomaculum ruminis DSM 2154 10737346 YP_004544533.1 CDS Desru_0972 NC_015589.1 1001094 1002170 D KEGG: drm:Dred_2574 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 1001094..1002170 Desulfotomaculum ruminis DSM 2154 10737347 YP_004544534.1 CDS Desru_0973 NC_015589.1 1002167 1002370 D KEGG: mta:Moth_1255 hypothetical protein; hypothetical protein 1002167..1002370 Desulfotomaculum ruminis DSM 2154 10737348 YP_004544535.1 CDS Desru_0974 NC_015589.1 1002453 1002680 D PFAM: protein of unknown function DUF378; KEGG: drm:Dred_2573 hypothetical protein; hypothetical protein 1002453..1002680 Desulfotomaculum ruminis DSM 2154 10737349 YP_004544536.1 CDS Desru_0975 NC_015589.1 1002870 1003667 D KEGG: tjr:TherJR_0419 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein 1002870..1003667 Desulfotomaculum ruminis DSM 2154 10737350 YP_004544537.1 CDS Desru_0976 NC_015589.1 1003705 1004376 D KEGG: mst:Msp_0959 polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1003705..1004376 Desulfotomaculum ruminis DSM 2154 10737351 YP_004544538.1 CDS Desru_0977 NC_015589.1 1004389 1005153 D KEGG: tjr:TherJR_0417 ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1004389..1005153 Desulfotomaculum ruminis DSM 2154 10737352 YP_004544539.1 CDS Desru_0978 NC_015589.1 1005403 1005870 R KEGG: pth:PTH_1736 hypothetical protein; hypothetical protein complement(1005403..1005870) Desulfotomaculum ruminis DSM 2154 10737353 YP_004544540.1 CDS Desru_0979 NC_015589.1 1005885 1006109 R PFAM: SirA-like domain-containing protein; KEGG: csc:Csac_2304 SirA family protein; SirA-like domain-containing protein complement(1005885..1006109) Desulfotomaculum ruminis DSM 2154 10737354 YP_004544541.1 CDS Desru_0980 NC_015589.1 1006130 1007791 R KEGG: pth:PTH_1734 NAD(FAD)-dependent dehydrogenases; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1006130..1007791) Desulfotomaculum ruminis DSM 2154 10737355 YP_004544542.1 CDS Desru_0981 NC_015589.1 1007795 1008082 R KEGG: pth:PTH_1733 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR complement(1007795..1008082) Desulfotomaculum ruminis DSM 2154 10737356 YP_004544543.1 CDS Desru_0982 NC_015589.1 1008189 1008482 R KEGG: drm:Dred_2572 hypothetical protein; hypothetical protein complement(1008189..1008482) Desulfotomaculum ruminis DSM 2154 10737357 YP_004544544.1 CDS Desru_0983 NC_015589.1 1008658 1010025 D PFAM: metallophosphoesterase; KEGG: drm:Dred_2571 metallophosphoesterase; metallophosphoesterase 1008658..1010025 Desulfotomaculum ruminis DSM 2154 10737358 YP_004544545.1 CDS Desru_0984 NC_015589.1 1010026 1012983 D PFAM: SMC domain protein; KEGG: drm:Dred_2570 SMC domain-containing protein; SMC domain-containing protein 1010026..1012983 Desulfotomaculum ruminis DSM 2154 10737359 YP_004544546.1 CDS Desru_0985 NC_015589.1 1012980 1013102 R KEGG: cpi:Cpin_4422 signal transduction histidine kinase with CheB and CheR activity; hypothetical protein complement(1012980..1013102) Desulfotomaculum ruminis DSM 2154 10737360 YP_004544547.1 CDS Desru_0986 NC_015589.1 1013576 1013950 D KEGG: dau:Daud_1571 hypothetical protein; hypothetical protein 1013576..1013950 Desulfotomaculum ruminis DSM 2154 10737361 YP_004544548.1 CDS Desru_0987 NC_015589.1 1013947 1015989 D PFAM: Na+/solute symporter; KEGG: dau:Daud_1570 Na+/solute symporter; Na+/solute symporter 1013947..1015989 Desulfotomaculum ruminis DSM 2154 10737362 YP_004544549.1 CDS Desru_0988 NC_015589.1 1016013 1016180 D KEGG: dau:Daud_1569 hypothetical protein; hypothetical protein 1016013..1016180 Desulfotomaculum ruminis DSM 2154 10737363 YP_004544550.1 CDS Desru_0989 NC_015589.1 1016193 1016894 D SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dau:Daud_1567 DNA-directed DNA polymerase; PFAM: Exonuclease RNase T and DNA polymerase III; DNA polymerase III subunit epsilon 1016193..1016894 Desulfotomaculum ruminis DSM 2154 10737364 YP_004544551.1 CDS Desru_0990 NC_015589.1 1016986 1018425 R KEGG: dau:Daud_2002 cyclic nucleotide-binding protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein; hypothetical protein complement(1016986..1018425) Desulfotomaculum ruminis DSM 2154 10737365 YP_004544552.1 CDS Desru_0991 NC_015589.1 1018468 1018755 R PFAM: branched-chain amino acid transport; KEGG: drm:Dred_2569 branched-chain amino acid transport; branched-chain amino acid transport complement(1018468..1018755) Desulfotomaculum ruminis DSM 2154 10737366 YP_004544553.1 CDS Desru_0992 NC_015589.1 1018752 1019456 R PFAM: AzlC family protein; KEGG: drm:Dred_2568 AzlC family protein; AzlC family protein complement(1018752..1019456) Desulfotomaculum ruminis DSM 2154 10737367 YP_004544554.1 CDS Desru_0993 NC_015589.1 1019633 1020547 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: sfu:Sfum_2001 hypothetical protein; hypothetical protein 1019633..1020547 Desulfotomaculum ruminis DSM 2154 10737368 YP_004544555.1 CDS Desru_0994 NC_015589.1 1020717 1021367 D PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: drm:Dred_2567 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 1020717..1021367 Desulfotomaculum ruminis DSM 2154 10737369 YP_004544556.1 CDS Desru_0995 NC_015589.1 1021360 1021695 D KEGG: drm:Dred_2566 hypothetical protein; hypothetical protein 1021360..1021695 Desulfotomaculum ruminis DSM 2154 10737370 YP_004544557.1 CDS Desru_0996 NC_015589.1 1021682 1022485 D KEGG: drm:Dred_2565 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 1021682..1022485 Desulfotomaculum ruminis DSM 2154 10737371 YP_004544558.1 CDS Desru_0997 NC_015589.1 1022464 1023297 D TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: drm:Dred_2564 cobalt transporter ATP-binding subunit; SMART: AAA ATPase; cobalt ABC transporter ATPase 1022464..1023297 Desulfotomaculum ruminis DSM 2154 10737372 YP_004544559.1 CDS Desru_0998 NC_015589.1 1024314 1024640 R KEGG: tjr:TherJR_0533 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin complement(1024314..1024640) Desulfotomaculum ruminis DSM 2154 10737377 YP_004544560.1 CDS Desru_0999 NC_015589.1 1024642 1024887 R TIGRFAM: prevent-host-death family protein; KEGG: pth:PTH_0540 hypothetical protein; prevent-host-death family protein complement(1024642..1024887) Desulfotomaculum ruminis DSM 2154 10737378 YP_004544561.1 CDS Desru_1000 NC_015589.1 1025103 1028438 R PFAM: UvrD/REP helicase; KEGG: mta:Moth_0254 UvrD/REP helicase; UvrD/REP helicase complement(1025103..1028438) Desulfotomaculum ruminis DSM 2154 10737379 YP_004544562.1 CDS Desru_1001 NC_015589.1 1028629 1030107 D PFAM: protein of unknown function DUF344; KEGG: tai:Taci_0333 protein of unknown function DUF344; hypothetical protein 1028629..1030107 Desulfotomaculum ruminis DSM 2154 10737380 YP_004544563.1 CDS Desru_1002 NC_015589.1 1030218 1030733 R KEGG: drm:Dred_2920 hypothetical protein; hypothetical protein complement(1030218..1030733) Desulfotomaculum ruminis DSM 2154 10737381 YP_004544564.1 CDS Desru_1003 NC_015589.1 1031006 1031206 R KEGG: bfo:BRAFLDRAFT_120486 hypothetical protein; hypothetical protein complement(1031006..1031206) Desulfotomaculum ruminis DSM 2154 10737382 YP_004544565.1 CDS Desru_1004 NC_015589.1 1031632 1032936 D KEGG: drm:Dred_2563 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type; trigger factor 1031632..1032936 Desulfotomaculum ruminis DSM 2154 10737383 YP_004544566.1 CDS Desru_1005 NC_015589.1 1033001 1033588 D TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: drm:Dred_2562 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease proteolytic subunit ClpP 1033001..1033588 Desulfotomaculum ruminis DSM 2154 10737384 YP_004544567.1 CDS Desru_1006 NC_015589.1 1033608 1034858 D TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: drm:Dred_2561 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 1033608..1034858 Desulfotomaculum ruminis DSM 2154 10737385 YP_004544568.1 CDS Desru_1007 NC_015589.1 1035111 1036823 D SMART: AAA ATPase; TIGRFAM: ATP-dependent protease LonB; KEGG: drm:Dred_2560 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; ATP-dependent protease LonB 1035111..1036823 Desulfotomaculum ruminis DSM 2154 10737386 YP_004544569.1 CDS Desru_1008 NC_015589.1 1037039 1039471 D SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: drm:Dred_2559 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATP-dependent protease La 1037039..1039471 Desulfotomaculum ruminis DSM 2154 10737387 YP_004544570.1 CDS Desru_1009 NC_015589.1 1039468 1040073 D KEGG: drm:Dred_2558 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YsxC 1039468..1040073 Desulfotomaculum ruminis DSM 2154 10737388 YP_004544571.1 CDS Desru_1010 NC_015589.1 1040115 1041227 R PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_2557 dehydrogenase (flavoproteins); FAD dependent oxidoreductase complement(1040115..1041227) Desulfotomaculum ruminis DSM 2154 10737389 YP_004544572.1 CDS Desru_1011 NC_015589.1 1041257 1042357 R KEGG: drm:Dred_2556 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component; nitrate/sulfonate/taurine/bicarbonate ABC transporter periplasmic protein complement(1041257..1042357) Desulfotomaculum ruminis DSM 2154 10737390 YP_004544573.1 CDS Desru_1012 NC_015589.1 1042525 1042992 D KEGG: drm:Dred_2555 hypothetical protein; hypothetical protein 1042525..1042992 Desulfotomaculum ruminis DSM 2154 10737391 YP_004544574.1 CDS Desru_1013 NC_015589.1 1043298 1045946 D KEGG: drm:Dred_2554 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 1043298..1045946 Desulfotomaculum ruminis DSM 2154 10737392 YP_004544575.1 CDS Desru_1014 NC_015589.1 1046018 1046245 D PFAM: Uncharacterised protein family UPF0150; KEGG: drm:Dred_2553 hypothetical protein; hypothetical protein 1046018..1046245 Desulfotomaculum ruminis DSM 2154 10737393 YP_004544576.1 CDS Desru_1015 NC_015589.1 1046278 1047591 D KEGG: drm:Dred_2552 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1046278..1047591 Desulfotomaculum ruminis DSM 2154 10737394 YP_004544577.1 CDS Desru_1016 NC_015589.1 1047916 1048548 D PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: drm:Dred_2551 redox-sensing transcriptional repressor REX; CoA-binding domain-containing protein 1047916..1048548 Desulfotomaculum ruminis DSM 2154 10737395 YP_004544578.1 CDS Desru_1017 NC_015589.1 1049031 1049630 D KEGG: drm:Dred_2550 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 1049031..1049630 Desulfotomaculum ruminis DSM 2154 10737396 YP_004544579.1 CDS Desru_1018 NC_015589.1 1049627 1050310 D KEGG: drm:Dred_2549 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC 1049627..1050310 Desulfotomaculum ruminis DSM 2154 10737397 YP_004544580.1 CDS Desru_1019 NC_015589.1 1050331 1051362 D KEGG: drm:Dred_2548 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 1050331..1051362 Desulfotomaculum ruminis DSM 2154 10737398 YP_004544581.1 CDS Desru_1020 NC_015589.1 1051377 1052237 D manually curated; TIGRFAM: rod shape-determining protein MreC; KEGG: drm:Dred_2547 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 1051377..1052237 Desulfotomaculum ruminis DSM 2154 10737399 YP_004544582.1 CDS Desru_1021 NC_015589.1 1052238 1052744 D TIGRFAM: rod shape-determining protein MreD; KEGG: drm:Dred_2546 hypothetical protein; rod shape-determining protein MreD 1052238..1052744 Desulfotomaculum ruminis DSM 2154 10737400 YP_004544583.1 CDS Desru_1022 NC_015589.1 1052787 1054763 D TIGRFAM: penicillin-binding protein 2; KEGG: drm:Dred_2545 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 1052787..1054763 Desulfotomaculum ruminis DSM 2154 10737401 YP_004544584.1 CDS Desru_1023 NC_015589.1 1054889 1055311 D PFAM: Septum formation inhibitor MinC; KEGG: drm:Dred_2544 septum formation inhibitor MinC; septum formation inhibitor MinC 1054889..1055311 Desulfotomaculum ruminis DSM 2154 10737402 YP_004544585.1 CDS Desru_1024 NC_015589.1 1055340 1056134 D TIGRFAM: septum site-determining protein MinD; KEGG: drm:Dred_2543 septum site-determining protein MinD; septum site-determining protein MinD 1055340..1056134 Desulfotomaculum ruminis DSM 2154 10737403 YP_004544586.1 CDS Desru_1025 NC_015589.1 1056151 1056426 D KEGG: drm:Dred_2542 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor MinE 1056151..1056426 Desulfotomaculum ruminis DSM 2154 10737404 YP_004544587.1 CDS Desru_1026 NC_015589.1 1056552 1057793 D KEGG: drm:Dred_2541 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; rod shape-determining protein RodA 1056552..1057793 Desulfotomaculum ruminis DSM 2154 10737405 YP_004544588.1 CDS Desru_1027 NC_015589.1 1058223 1059077 D PFAM: Peptidase M23; KEGG: drm:Dred_2540 peptidase M23B; peptidase M23 1058223..1059077 Desulfotomaculum ruminis DSM 2154 10737406 YP_004544589.1 CDS Desru_1028 NC_015589.1 1059074 1059955 D PFAM: peptidase M50; KEGG: drm:Dred_2539 peptidase M50; peptidase M50 1059074..1059955 Desulfotomaculum ruminis DSM 2154 10737407 YP_004544590.1 CDS Desru_1029 NC_015589.1 1060116 1061990 D KEGG: drm:Dred_2538 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1060116..1061990 Desulfotomaculum ruminis DSM 2154 10737408 YP_004544591.1 CDS Desru_1030 NC_015589.1 1061965 1062660 D PFAM: Protein of unknown function DUF2344; KEGG: drm:Dred_2537 hypothetical protein; hypothetical protein 1061965..1062660 Desulfotomaculum ruminis DSM 2154 10737409 YP_004544592.1 CDS Desru_1031 NC_015589.1 1062689 1064368 D KEGG: drm:Dred_2536 ribonuclease; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; deoxyribonuclease/rho motif-related TRAM; ribonuclease Rne/Rng family 1062689..1064368 Desulfotomaculum ruminis DSM 2154 10737410 YP_004544593.1 CDS Desru_1032 NC_015589.1 1064541 1064852 D KEGG: drm:Dred_2535 ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 1064541..1064852 Desulfotomaculum ruminis DSM 2154 10737411 YP_004544594.1 CDS Desru_1033 NC_015589.1 1064891 1065160 D KEGG: drm:Dred_2534 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 1064891..1065160 Desulfotomaculum ruminis DSM 2154 10737412 YP_004544595.1 CDS Desru_1034 NC_015589.1 1065389 1065943 D KEGG: drm:Dred_2533 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism 1065389..1065943 Desulfotomaculum ruminis DSM 2154 10737413 YP_004544596.1 CDS Desru_1035 NC_015589.1 1065970 1067262 D KEGG: drm:Dred_2532 GTP1/OBG domain-containing protein; TIGRFAM: GTP-binding protein Obg/CgtA; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; GTP-binding protein Obg/CgtA 1065970..1067262 Desulfotomaculum ruminis DSM 2154 10737414 YP_004544597.1 CDS Desru_1036 NC_015589.1 1067231 1067968 D KEGG: drm:Dred_2531 sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 1067231..1067968 Desulfotomaculum ruminis DSM 2154 10737415 YP_004544598.1 CDS Desru_1037 NC_015589.1 1067990 1068496 D PFAM: flavin reductase domain protein FMN-binding; KEGG: drm:Dred_2530 hypothetical protein; flavin reductase domain-containing protein 1067990..1068496 Desulfotomaculum ruminis DSM 2154 10737416 YP_004544599.1 CDS Desru_1038 NC_015589.1 1068486 1068842 R PFAM: Sporulation protein YtfJ; KEGG: bts:Btus_2229 sporulation protein YtfJ; Sporulation protein YtfJ complement(1068486..1068842) Desulfotomaculum ruminis DSM 2154 10737417 YP_004544600.1 CDS Desru_1039 NC_015589.1 1068954 1069640 R KEGG: mcc:702937 apolipoprotein B (including Ag(x) antigen); hypothetical protein complement(1068954..1069640) Desulfotomaculum ruminis DSM 2154 10737418 YP_004544601.1 CDS Desru_1040 NC_015589.1 1069837 1072062 R KEGG: msm:MSMEG_6058 cadmium transporting P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase complement(1069837..1072062) Desulfotomaculum ruminis DSM 2154 10737419 YP_004544602.1 CDS Desru_1041 NC_015589.1 1072234 1076853 D KEGG: dae:Dtox_1725 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase 1072234..1076853 Desulfotomaculum ruminis DSM 2154 10737420 YP_004544603.1 CDS Desru_1042 NC_015589.1 1076879 1077319 R KEGG: dae:Dtox_1726 hypothetical protein; hypothetical protein complement(1076879..1077319) Desulfotomaculum ruminis DSM 2154 10737421 YP_004544604.1 CDS Desru_1043 NC_015589.1 1077483 1078265 D KEGG: dae:Dtox_1727 hypothetical protein; hypothetical protein 1077483..1078265 Desulfotomaculum ruminis DSM 2154 10737422 YP_004544605.1 CDS Desru_1044 NC_015589.1 1078286 1078519 D KEGG: dae:Dtox_1728 hypothetical protein; hypothetical protein 1078286..1078519 Desulfotomaculum ruminis DSM 2154 10737423 YP_004544606.1 CDS Desru_1045 NC_015589.1 1078781 1079647 R KEGG: drm:Dred_2529 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(1078781..1079647) Desulfotomaculum ruminis DSM 2154 10737424 YP_004544607.1 CDS Desru_1046 NC_015589.1 1079861 1082317 D KEGG: drm:Dred_1859 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; protein of unknown function DUF342; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein 1079861..1082317 Desulfotomaculum ruminis DSM 2154 10737425 YP_004544608.1 CDS Desru_1047 NC_015589.1 1082389 1083003 R KEGG: ccb:Clocel_3238 hypothetical protein; hypothetical protein complement(1082389..1083003) Desulfotomaculum ruminis DSM 2154 10737426 YP_004544609.1 CDS Desru_1048 NC_015589.1 1083448 1084116 D KEGG: drm:Dred_1262 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; cyclic nucleotide-binding protein 1083448..1084116 Desulfotomaculum ruminis DSM 2154 10737427 YP_004544610.1 CDS Desru_1049 NC_015589.1 1084450 1084866 D KEGG: drm:Dred_1263 hypothetical protein; hypothetical protein 1084450..1084866 Desulfotomaculum ruminis DSM 2154 10737428 YP_004544611.1 CDS Desru_1050 NC_015589.1 1084887 1085840 D PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein; hypothetical protein 1084887..1085840 Desulfotomaculum ruminis DSM 2154 10737429 YP_004544612.1 CDS Desru_1051 NC_015589.1 1085887 1086474 D PFAM: protein of unknown function DUF1847; KEGG: dau:Daud_1395 hypothetical protein; hypothetical protein 1085887..1086474 Desulfotomaculum ruminis DSM 2154 10737430 YP_004544613.1 CDS Desru_1052 NC_015589.1 1086585 1087070 D PFAM: histidine triad (HIT) protein; KEGG: drm:Dred_2520 histidine triad (HIT) protein; histidine triad (HIT) protein 1086585..1087070 Desulfotomaculum ruminis DSM 2154 10737431 YP_004544614.1 CDS Desru_1053 NC_015589.1 1087234 1087836 D TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: drm:Dred_2519 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 1087234..1087836 Desulfotomaculum ruminis DSM 2154 10737432 YP_004544615.1 CDS Desru_1054 NC_015589.1 1087967 1088224 D KEGG: drm:Dred_2518 RNP-1-like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 1087967..1088224 Desulfotomaculum ruminis DSM 2154 10737433 YP_004544616.1 CDS Desru_1055 NC_015589.1 1088296 1088877 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_2517 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1088296..1088877 Desulfotomaculum ruminis DSM 2154 10737434 YP_004544617.1 CDS Desru_1056 NC_015589.1 1088923 1089279 D KEGG: drm:Dred_2516 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 1088923..1089279 Desulfotomaculum ruminis DSM 2154 10737435 YP_004544618.1 CDS Desru_1057 NC_015589.1 1089664 1091328 D PFAM: AMP-dependent synthetase and ligase; KEGG: pth:PTH_0838 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; AMP-dependent synthetase and ligase 1089664..1091328 Desulfotomaculum ruminis DSM 2154 10737436 YP_004544619.1 CDS Desru_1058 NC_015589.1 1091448 1093928 D KEGG: drm:Dred_2515 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 1091448..1093928 Desulfotomaculum ruminis DSM 2154 10737437 YP_004544620.1 CDS Desru_1059 NC_015589.1 1094000 1094557 D PFAM: Protein of unknown function DUF2179; KEGG: drm:Dred_2514 hypothetical protein; hypothetical protein 1094000..1094557 Desulfotomaculum ruminis DSM 2154 10737438 YP_004544621.1 CDS Desru_1060 NC_015589.1 1094625 1095317 D PFAM: protein of unknown function DUF421; KEGG: drm:Dred_2513 hypothetical protein; hypothetical protein 1094625..1095317 Desulfotomaculum ruminis DSM 2154 10737439 YP_004544622.1 CDS Desru_1061 NC_015589.1 1095425 1096069 D KEGG: drm:Dred_2512 helix-hairpin-helix repeat-containing competence protein ComEA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; competence protein ComEA 1095425..1096069 Desulfotomaculum ruminis DSM 2154 10737440 YP_004544623.1 CDS Desru_1062 NC_015589.1 1096113 1096766 D PFAM: Lytic transglycosylase catalytic; KEGG: drm:Dred_2511 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 1096113..1096766 Desulfotomaculum ruminis DSM 2154 10737441 YP_004544624.1 CDS Desru_1063 NC_015589.1 1096770 1099172 D KEGG: drm:Dred_2510 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 1096770..1099172 Desulfotomaculum ruminis DSM 2154 10737442 YP_004544625.1 CDS Desru_1064 NC_015589.1 1099305 1100201 D KEGG: pjd:Pjdr2_0933 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Methyltransferase type 12; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1099305..1100201 Desulfotomaculum ruminis DSM 2154 10737443 YP_004544626.1 CDS Desru_1065 NC_015589.1 1102652 1103887 R PFAM: integrase family protein; KEGG: tit:Thit_1365 integrase family protein; integrase family protein complement(1102652..1103887) Desulfotomaculum ruminis DSM 2154 10737444 YP_004544627.1 CDS Desru_1066 NC_015589.1 1103979 1104443 R PFAM: protein of unknown function DUF955; KEGG: cbi:CLJ_B1360 phage protein; hypothetical protein complement(1103979..1104443) Desulfotomaculum ruminis DSM 2154 10737445 YP_004544628.1 CDS Desru_1067 NC_015589.1 1104458 1105015 R SMART: helix-turn-helix domain protein; KEGG: bai:BAA_3851 hypothetical protein; helix-turn-helix domain-containing protein complement(1104458..1105015) Desulfotomaculum ruminis DSM 2154 10737446 YP_004544629.1 CDS Desru_1068 NC_015589.1 1105285 1105488 D SMART: helix-turn-helix domain protein; KEGG: bai:BAA_3850 hypothetical protein; helix-turn-helix domain-containing protein 1105285..1105488 Desulfotomaculum ruminis DSM 2154 10737447 YP_004544630.1 CDS Desru_1069 NC_015589.1 1105489 1106160 D KEGG: hmo:HM1_2938 hypothetical protein; TIGRFAM: phage regulatory protein, Rha family; PFAM: Phage regulatory protein, Rha-like; phage regulatory protein Rha family 1105489..1106160 Desulfotomaculum ruminis DSM 2154 10737448 YP_004544631.1 CDS Desru_1070 NC_015589.1 1106179 1106481 D KEGG: tit:Thit_1409 DNA binding domain protein, excisionase family; hypothetical protein 1106179..1106481 Desulfotomaculum ruminis DSM 2154 10737449 YP_004544632.1 CDS Desru_1071 NC_015589.1 1106499 1106870 D KEGG: cju:C8J_0029 hypothetical protein; hypothetical protein 1106499..1106870 Desulfotomaculum ruminis DSM 2154 10737450 YP_004544633.1 CDS Desru_1072 NC_015589.1 1106867 1107328 D PFAM: Sporulation initiation factor Spo0A; KEGG: hmo:HM1_0304 stage 0 sporulation protein A; Sporulation initiation factor Spo0A 1106867..1107328 Desulfotomaculum ruminis DSM 2154 10737451 YP_004544634.1 CDS Desru_1073 NC_015589.1 1107506 1108105 D KEGG: apa:APP7_0464 hypothetical protein; hypothetical protein 1107506..1108105 Desulfotomaculum ruminis DSM 2154 10737452 YP_004544635.1 CDS Desru_1074 NC_015589.1 1108273 1108665 D KEGG: drm:Dred_1187 hypothetical protein; hypothetical protein 1108273..1108665 Desulfotomaculum ruminis DSM 2154 10737453 YP_004544636.1 CDS Desru_1075 NC_015589.1 1108662 1109840 D KEGG: drm:Dred_1188 hypothetical protein; hypothetical protein 1108662..1109840 Desulfotomaculum ruminis DSM 2154 10737454 YP_004544637.1 CDS Desru_1076 NC_015589.1 1109863 1110429 D KEGG: drm:Dred_1189 hypothetical protein; hypothetical protein 1109863..1110429 Desulfotomaculum ruminis DSM 2154 10737455 YP_004544638.1 CDS Desru_1077 NC_015589.1 1110434 1112398 D KEGG: drm:Dred_1191 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; DNA-directed DNA polymerase 1110434..1112398 Desulfotomaculum ruminis DSM 2154 10737456 YP_004544639.1 CDS Desru_1078 NC_015589.1 1112417 1112680 D KEGG: cbk:CLL_A2772 hypothetical protein; hypothetical protein 1112417..1112680 Desulfotomaculum ruminis DSM 2154 10737457 YP_004544640.1 CDS Desru_1079 NC_015589.1 1112687 1113313 D KEGG: bce:BC1875 phage protein; phage protein 1112687..1113313 Desulfotomaculum ruminis DSM 2154 10737458 YP_004544641.1 CDS Desru_1080 NC_015589.1 1113327 1113704 D KEGG: pkn:PKH_126950 hypothetical protein; hypothetical protein 1113327..1113704 Desulfotomaculum ruminis DSM 2154 10737459 YP_004544642.1 CDS Desru_1081 NC_015589.1 1113719 1115341 D KEGG: drm:Dred_1195 hypothetical protein; hypothetical protein 1113719..1115341 Desulfotomaculum ruminis DSM 2154 10737460 YP_004544643.1 CDS Desru_1082 NC_015589.1 1115357 1117819 D PFAM: virulence-associated E family protein; KEGG: drm:Dred_1196 virulence-associated E family protein; virulence-associated E family protein 1115357..1117819 Desulfotomaculum ruminis DSM 2154 10737461 YP_004544644.1 CDS Desru_1083 NC_015589.1 1118050 1118364 D PFAM: VRR-NUC domain-containing protein; KEGG: drm:Dred_1197 hypothetical protein; VRR-NUC domain-containing protein 1118050..1118364 Desulfotomaculum ruminis DSM 2154 10737462 YP_004544645.1 CDS Desru_1084 NC_015589.1 1118366 1119820 D SMART: DEAD-like helicase; KEGG: ccb:Clocel_0764 SNF2-related protein; DEAD/DEAH box helicase 1118366..1119820 Desulfotomaculum ruminis DSM 2154 10737463 YP_004544646.1 CDS Desru_1085 NC_015589.1 1119787 1120323 D KEGG: drm:Dred_2611 hypothetical protein; hypothetical protein 1119787..1120323 Desulfotomaculum ruminis DSM 2154 10737464 YP_004544647.1 CDS Desru_1086 NC_015589.1 1120526 1121005 D KEGG: pop:POPTR_782800 hypothetical protein; hypothetical protein 1120526..1121005 Desulfotomaculum ruminis DSM 2154 10737465 YP_004544648.1 CDS Desru_1087 NC_015589.1 1121053 1121481 D KEGG: enc:ECL_03566 phage terminase small subunit; phage terminase small subunit 1121053..1121481 Desulfotomaculum ruminis DSM 2154 10737466 YP_004544649.1 CDS Desru_1088 NC_015589.1 1121471 1122820 D KEGG: str:Sterm_1259 phage terminase, large subunit, PBSX family; TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; phage terminase large subunit PBSX family 1121471..1122820 Desulfotomaculum ruminis DSM 2154 10737467 YP_004544650.1 CDS Desru_1089 NC_015589.1 1122814 1123038 D KEGG: acd:AOLE_10715 putative TonB protein; hypothetical protein 1122814..1123038 Desulfotomaculum ruminis DSM 2154 10737468 YP_004544651.1 CDS Desru_1090 NC_015589.1 1123035 1124819 D KEGG: azc:AZC_0840 hypothetical protein; hypothetical protein 1123035..1124819 Desulfotomaculum ruminis DSM 2154 10737469 YP_004544652.1 CDS Desru_1091 NC_015589.1 1124895 1125749 D KEGG: pyo:PY04960 hypothetical protein; hypothetical protein 1124895..1125749 Desulfotomaculum ruminis DSM 2154 10737470 YP_004544653.1 CDS Desru_1092 NC_015589.1 1125761 1126699 D KEGG: dal:Dalk_3972 hypothetical protein; hypothetical protein 1125761..1126699 Desulfotomaculum ruminis DSM 2154 10737471 YP_004544654.1 CDS Desru_1093 NC_015589.1 1126749 1127084 D KEGG: xca:xccb100_0765 pteridine reductase; hypothetical protein 1126749..1127084 Desulfotomaculum ruminis DSM 2154 10737472 YP_004544655.1 CDS Desru_1094 NC_015589.1 1127088 1127702 D KEGG: tps:THAPSDRAFT_24562 hypothetical protein; hypothetical protein 1127088..1127702 Desulfotomaculum ruminis DSM 2154 10737473 YP_004544656.1 CDS Desru_1095 NC_015589.1 1127702 1128004 D KEGG: der:Dere_GG24267 GG24267 gene product from transcript GG24267-RA; hypothetical protein 1127702..1128004 Desulfotomaculum ruminis DSM 2154 10737474 YP_004544657.1 CDS Desru_1096 NC_015589.1 1128020 1128406 D KEGG: cph:Cpha266_1609 hypothetical protein; hypothetical protein 1128020..1128406 Desulfotomaculum ruminis DSM 2154 10737475 YP_004544658.1 CDS Desru_1097 NC_015589.1 1128430 1130403 D KEGG: cfl:Cfla_0521 PA14 domain protein; hypothetical protein 1128430..1130403 Desulfotomaculum ruminis DSM 2154 10737476 YP_004544659.1 CDS Desru_1098 NC_015589.1 1130413 1131693 D KEGG: ckr:CKR_2872 hypothetical protein; hypothetical protein 1130413..1131693 Desulfotomaculum ruminis DSM 2154 10737477 YP_004544660.1 CDS Desru_1099 NC_015589.1 1131712 1131876 D KEGG: amt:Amet_2434 hypothetical protein; hypothetical protein 1131712..1131876 Desulfotomaculum ruminis DSM 2154 10737478 YP_004544661.1 CDS Desru_1100 NC_015589.1 1131934 1132560 D KEGG: adg:Adeg_0754 copper amine oxidase domain protein; hypothetical protein 1131934..1132560 Desulfotomaculum ruminis DSM 2154 10737479 YP_004544662.1 CDS Desru_1101 NC_015589.1 1132607 1133449 D KEGG: mdo:100015927 similar to NUMA1 variant protein; hypothetical protein 1132607..1133449 Desulfotomaculum ruminis DSM 2154 10737480 YP_004544663.1 CDS Desru_1102 NC_015589.1 1133461 1134888 D KEGG: ctp:CTRG_04225 hypothetical protein; hypothetical protein 1133461..1134888 Desulfotomaculum ruminis DSM 2154 10737481 YP_004544664.1 CDS Desru_1103 NC_015589.1 1134898 1139130 D KEGG: gca:Galf_2026 hypothetical protein; hypothetical protein 1134898..1139130 Desulfotomaculum ruminis DSM 2154 10737482 YP_004544665.1 CDS Desru_1104 NC_015589.1 1139132 1139527 D KEGG: gyc:GYMC61_0644 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; toxin secretion/phage lysis holin 1139132..1139527 Desulfotomaculum ruminis DSM 2154 10737483 YP_004544666.1 CDS Desru_1105 NC_015589.1 1139530 1139817 D KEGG: bld:BLi01542 hypothetical protein; hypothetical protein 1139530..1139817 Desulfotomaculum ruminis DSM 2154 10737484 YP_004544667.1 CDS Desru_1106 NC_015589.1 1139810 1140538 D PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2806 N-acetylmuramoyl-L-alanine amidase, putative; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 1139810..1140538 Desulfotomaculum ruminis DSM 2154 10737485 YP_004544668.1 CDS Desru_1107 NC_015589.1 1140711 1140953 D KEGG: kpu:KP1_2317 phosphatidylglycerophosphatase B; hypothetical protein 1140711..1140953 Desulfotomaculum ruminis DSM 2154 10737486 YP_004544669.1 CDS Desru_1108 NC_015589.1 1141003 1141962 R KEGG: llm:llmg_2265 hypothetical protein; hypothetical protein complement(1141003..1141962) Desulfotomaculum ruminis DSM 2154 10737487 YP_004544670.1 CDS Desru_1109 NC_015589.1 1142127 1142582 D KEGG: hse:Hsero_4503 autotransporter adhesin protein; hypothetical protein 1142127..1142582 Desulfotomaculum ruminis DSM 2154 10737488 YP_004544671.1 CDS Desru_1110 NC_015589.1 1143617 1143940 R PFAM: protein of unknown function UPF0060; KEGG: dae:Dtox_3546 protein of unknown function UPF0060; hypothetical protein complement(1143617..1143940) Desulfotomaculum ruminis DSM 2154 10737489 YP_004544672.1 CDS Desru_1111 NC_015589.1 1143937 1144290 R PFAM: protein of unknown function UPF0060; KEGG: dae:Dtox_2546 protein of unknown function UPF0060; hypothetical protein complement(1143937..1144290) Desulfotomaculum ruminis DSM 2154 10737490 YP_004544673.1 CDS Desru_1112 NC_015589.1 1144469 1145287 D KEGG: ccb:Clocel_0464 transcriptional activator ligand binding domain-containing protein; PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; transcription activator effector binding protein 1144469..1145287 Desulfotomaculum ruminis DSM 2154 10737491 YP_004544674.1 CDS Desru_1113 NC_015589.1 1145536 1146981 D KEGG: bbe:BBR47_55960 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase 1145536..1146981 Desulfotomaculum ruminis DSM 2154 10737492 YP_004544675.1 CDS Desru_1114 NC_015589.1 1147164 1147772 D KEGG: drm:Dred_2143 hypothetical protein; hypothetical protein 1147164..1147772 Desulfotomaculum ruminis DSM 2154 10737493 YP_004544676.1 CDS Desru_1115 NC_015589.1 1147826 1148590 D PFAM: Methyltransferase type 11; KEGG: mpd:MCP_0237 hypothetical protein; type 11 methyltransferase 1147826..1148590 Desulfotomaculum ruminis DSM 2154 10737494 YP_004544677.1 CDS Desru_1116 NC_015589.1 1148748 1149530 D KEGG: reu:Reut_A0738 hypothetical protein; hypothetical protein 1148748..1149530 Desulfotomaculum ruminis DSM 2154 10737495 YP_004544678.1 CDS Desru_1117 NC_015589.1 1149645 1152551 D PFAM: glycosyl transferase family 2; Methyltransferase type 11; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 1149645..1152551 Desulfotomaculum ruminis DSM 2154 10737496 YP_004544679.1 CDS Desru_1118 NC_015589.1 1152579 1153097 D TIGRFAM: adenylylsulfate kinase; KEGG: sus:Acid_7933 adenylylsulfate kinase / phosphoadenylylsulfate reductase (thioredoxin); PFAM: adenylylsulfate kinase; adenylylsulfate kinase 1152579..1153097 Desulfotomaculum ruminis DSM 2154 10737497 YP_004544680.1 CDS Desru_1119 NC_015589.1 1153130 1154185 D KEGG: cyp:PCC8801_2037 hypothetical protein; hypothetical protein 1153130..1154185 Desulfotomaculum ruminis DSM 2154 10737498 YP_004544681.1 CDS Desru_1120 NC_015589.1 1154237 1155157 D PFAM: Methyltransferase type 12; KEGG: nde:NIDE3427 hypothetical protein; type 12 methyltransferase 1154237..1155157 Desulfotomaculum ruminis DSM 2154 10737499 YP_004544682.1 CDS Desru_1121 NC_015589.1 1155341 1156189 R TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dau:Daud_1686 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(1155341..1156189) Desulfotomaculum ruminis DSM 2154 10737500 YP_004544683.1 CDS Desru_1122 NC_015589.1 1156186 1156647 R KEGG: adg:Adeg_0259 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1156186..1156647) Desulfotomaculum ruminis DSM 2154 10737501 YP_004544684.1 CDS Desru_1123 NC_015589.1 1156669 1157736 R KEGG: pth:PTH_1078 dTDP-glucose pyrophosphorylase; TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase complement(1156669..1157736) Desulfotomaculum ruminis DSM 2154 10737502 YP_004544685.1 CDS Desru_1124 NC_015589.1 1157876 1158865 D KEGG: pjd:Pjdr2_4988 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 1157876..1158865 Desulfotomaculum ruminis DSM 2154 10737503 YP_004544686.1 CDS Desru_1125 NC_015589.1 1158878 1159666 R KEGG: drm:Dred_2508 hypothetical protein; hypothetical protein complement(1158878..1159666) Desulfotomaculum ruminis DSM 2154 10737504 YP_004544687.1 CDS Desru_1126 NC_015589.1 1159783 1160106 D PFAM: protein of unknown function DUF77; KEGG: drm:Dred_2507 hypothetical protein; hypothetical protein 1159783..1160106 Desulfotomaculum ruminis DSM 2154 10737505 YP_004544688.1 CDS Desru_1127 NC_015589.1 1160107 1161159 D KEGG: drm:Dred_2506 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 1160107..1161159 Desulfotomaculum ruminis DSM 2154 10737506 YP_004544689.1 CDS Desru_1128 NC_015589.1 1161188 1161454 R KEGG: drm:Dred_2505 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 complement(1161188..1161454) Desulfotomaculum ruminis DSM 2154 10737507 YP_004544690.1 CDS Desru_1129 NC_015589.1 1161581 1161916 D PFAM: membrane protein of unknown function; KEGG: drm:Dred_2504 hypothetical protein; hypothetical protein 1161581..1161916 Desulfotomaculum ruminis DSM 2154 10737508 YP_004544691.1 CDS Desru_1130 NC_015589.1 1162149 1163240 D KEGG: drm:Dred_2503 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; stage II sporulation protein P 1162149..1163240 Desulfotomaculum ruminis DSM 2154 10737509 YP_004544692.1 CDS Desru_1131 NC_015589.1 1163314 1163694 D KEGG: drm:Dred_2502 hypothetical protein; hypothetical protein 1163314..1163694 Desulfotomaculum ruminis DSM 2154 10737510 YP_004544693.1 CDS Desru_1132 NC_015589.1 1164026 1165834 D KEGG: drm:Dred_2501 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein LepA 1164026..1165834 Desulfotomaculum ruminis DSM 2154 10737511 YP_004544694.1 CDS Desru_1133 NC_015589.1 1165850 1167010 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: drm:Dred_2500 putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; oxygen-independent coproporphyrinogen III oxidase 1165850..1167010 Desulfotomaculum ruminis DSM 2154 10737512 YP_004544695.1 CDS Desru_1134 NC_015589.1 1167133 1168179 D KEGG: drm:Dred_2499 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like; heat-inducible transcription repressor HrcA 1167133..1168179 Desulfotomaculum ruminis DSM 2154 10737513 YP_004544696.1 CDS Desru_1135 NC_015589.1 1168195 1169760 D PFAM: chaperonin Cpn60/TCP-1; KEGG: drm:Dred_2498 chaperonin Cpn60/TCP-1; chaperonin Cpn60/TCP-1 1168195..1169760 Desulfotomaculum ruminis DSM 2154 10737514 YP_004544697.1 CDS Desru_1136 NC_015589.1 1169757 1170383 D PFAM: GrpE protein; KEGG: drm:Dred_2497 GrpE protein; GrpE protein HSP-70 cofactor 1169757..1170383 Desulfotomaculum ruminis DSM 2154 10737515 YP_004544698.1 CDS Desru_1137 NC_015589.1 1170415 1172265 D KEGG: drm:Dred_2496 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 1170415..1172265 Desulfotomaculum ruminis DSM 2154 10737516 YP_004544699.1 CDS Desru_1138 NC_015589.1 1172349 1173479 D TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: drm:Dred_2495 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ 1172349..1173479 Desulfotomaculum ruminis DSM 2154 10737517 YP_004544700.1 CDS Desru_1139 NC_015589.1 1173733 1174659 D KEGG: drm:Dred_2494 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 1173733..1174659 Desulfotomaculum ruminis DSM 2154 10737518 YP_004544701.1 CDS Desru_1140 NC_015589.1 1174661 1175401 D PFAM: protein of unknown function DUF558; KEGG: drm:Dred_2493 16S ribosomal RNA methyltransferase RsmE; hypothetical protein 1174661..1175401 Desulfotomaculum ruminis DSM 2154 10737519 YP_004544702.1 CDS Desru_1141 NC_015589.1 1175414 1176724 D TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: drm:Dred_2492 RNA modification protein; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 1175414..1176724 Desulfotomaculum ruminis DSM 2154 10737520 YP_004544703.1 CDS Desru_1142 NC_015589.1 1176832 1177176 D PFAM: histidine triad (HIT) protein; KEGG: drm:Dred_2491 histidine triad (HIT) protein; histidine triad (HIT) protein 1176832..1177176 Desulfotomaculum ruminis DSM 2154 10737521 YP_004544704.1 CDS Desru_1143 NC_015589.1 1177300 1177479 D KEGG: drm:Dred_2490 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 1177300..1177479 Desulfotomaculum ruminis DSM 2154 10737522 YP_004544705.1 CDS Desru_1144 NC_015589.1 1177626 1178135 D PFAM: protein of unknown function DUF107; KEGG: drm:Dred_2489 hypothetical protein; hypothetical protein 1177626..1178135 Desulfotomaculum ruminis DSM 2154 10737523 YP_004544706.1 CDS Desru_1145 NC_015589.1 1178169 1179173 D KEGG: drm:Dred_2488 hypothetical protein; hypothetical protein 1178169..1179173 Desulfotomaculum ruminis DSM 2154 10737524 YP_004544707.1 CDS Desru_1146 NC_015589.1 1179188 1179616 D KEGG: drm:Dred_2487 hypothetical protein; hypothetical protein 1179188..1179616 Desulfotomaculum ruminis DSM 2154 10737525 YP_004544708.1 CDS Desru_1147 NC_015589.1 1179672 1179971 D KEGG: drm:Dred_2486 hypothetical protein; hypothetical protein 1179672..1179971 Desulfotomaculum ruminis DSM 2154 10737526 YP_004544709.1 CDS Desru_1148 NC_015589.1 1179971 1181239 D KEGG: drm:Dred_2485 putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD; sporulation protein YqfD 1179971..1181239 Desulfotomaculum ruminis DSM 2154 10737527 YP_004544710.1 CDS Desru_1149 NC_015589.1 1181236 1182198 D PFAM: PhoH family protein; K Homology, type 1, subgroup; KEGG: drm:Dred_2484 PhoH family protein; PhoH family protein 1181236..1182198 Desulfotomaculum ruminis DSM 2154 10737528 YP_004544711.1 CDS Desru_1150 NC_015589.1 1182234 1184393 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_2483 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1182234..1184393 Desulfotomaculum ruminis DSM 2154 10737529 YP_004544712.1 CDS Desru_1151 NC_015589.1 1184374 1184835 D PFAM: protein of unknown function UPF0054; KEGG: drm:Dred_2482 putative metalloprotease; hypothetical protein 1184374..1184835 Desulfotomaculum ruminis DSM 2154 10737530 YP_004544713.1 CDS Desru_1152 NC_015589.1 1184835 1185197 D PFAM: diacylglycerol kinase; KEGG: drm:Dred_2481 diacylglycerol kinase; diacylglycerol kinase 1184835..1185197 Desulfotomaculum ruminis DSM 2154 10737531 YP_004544714.1 CDS Desru_1153 NC_015589.1 1185353 1185739 D KEGG: drm:Dred_2480 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; cytidine deaminase 1185353..1185739 Desulfotomaculum ruminis DSM 2154 10737532 YP_004544715.1 CDS Desru_1154 NC_015589.1 1185945 1186853 D KEGG: drm:Dred_2479 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; GTP-binding protein Era 1185945..1186853 Desulfotomaculum ruminis DSM 2154 10737533 YP_004544716.1 CDS Desru_1155 NC_015589.1 1186869 1188218 D KEGG: dau:Daud_0481 magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; magnesium transporter 1186869..1188218 Desulfotomaculum ruminis DSM 2154 10737534 YP_004544717.1 CDS Desru_1156 NC_015589.1 1188415 1188972 R manually curated; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: drm:Dred_2477 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1188415..1188972) Desulfotomaculum ruminis DSM 2154 10737535 YP_004544718.1 CDS Desru_1157 NC_015589.1 1189086 1189892 D KEGG: drm:Dred_2475 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO 1189086..1189892 Desulfotomaculum ruminis DSM 2154 10737536 YP_004544719.1 CDS Desru_1158 NC_015589.1 1189882 1190331 D KEGG: drm:Dred_2474 hypothetical protein; hypothetical protein 1189882..1190331 Desulfotomaculum ruminis DSM 2154 10737537 YP_004544720.1 CDS Desru_1159 NC_015589.1 1190654 1191541 D TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: drm:Dred_2473 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl-tRNA synthetase subunit alpha 1190654..1191541 Desulfotomaculum ruminis DSM 2154 10737538 YP_004544721.1 CDS Desru_1160 NC_015589.1 1191534 1193618 D TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: drm:Dred_2472 glycine--tRNA ligase; glycyl-tRNA synthetase subunit beta 1191534..1193618 Desulfotomaculum ruminis DSM 2154 10737539 YP_004544722.1 CDS Desru_1161 NC_015589.1 1193740 1194375 D PFAM: CBS domain containing protein; KEGG: drm:Dred_2471 signal-transduction protein; hypothetical protein 1193740..1194375 Desulfotomaculum ruminis DSM 2154 10737540 YP_004544723.1 CDS Desru_1162 NC_015589.1 1194350 1195225 D PFAM: protein of unknown function DUF299; KEGG: drm:Dred_2470 hypothetical protein; hypothetical protein 1194350..1195225 Desulfotomaculum ruminis DSM 2154 10737541 YP_004544724.1 CDS Desru_1163 NC_015589.1 1195318 1197975 D TIGRFAM: pyruvate, phosphate dikinase; KEGG: drm:Dred_2469 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; pyruvate phosphate dikinase 1195318..1197975 Desulfotomaculum ruminis DSM 2154 10737542 YP_004544725.1 CDS Desru_1164 NC_015589.1 1198296 1198583 D TIGRFAM: prevent-host-death family protein; KEGG: drm:Dred_2468 prevent-host-death family protein; prevent-host-death family protein 1198296..1198583 Desulfotomaculum ruminis DSM 2154 10737543 YP_004544726.1 CDS Desru_1165 NC_015589.1 1198567 1198884 D PFAM: plasmid stabilization system; KEGG: drm:Dred_2467 plasmid stabilization system protein; plasmid stabilization system 1198567..1198884 Desulfotomaculum ruminis DSM 2154 10737544 YP_004544727.1 CDS Desru_1166 NC_015589.1 1199023 1199193 D KEGG: spo:SPAC869.02c nitric oxide dioxygenase (predicted); hypothetical protein 1199023..1199193 Desulfotomaculum ruminis DSM 2154 10737545 YP_004544728.1 CDS Desru_1167 NC_015589.1 1199222 1199812 D KEGG: det:DET1456 2'-5' RNA ligase family protein; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; 2'-5' RNA ligase 1199222..1199812 Desulfotomaculum ruminis DSM 2154 10737546 YP_004544729.1 CDS Desru_1168 NC_015589.1 1199855 1200463 D PFAM: NADPH-dependent FMN reductase; KEGG: drm:Dred_2465 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1199855..1200463 Desulfotomaculum ruminis DSM 2154 10737547 YP_004544730.1 CDS Desru_1169 NC_015589.1 1200469 1201473 D TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_2464 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 1200469..1201473 Desulfotomaculum ruminis DSM 2154 10737548 YP_004544731.1 CDS Desru_1170 NC_015589.1 1201677 1203500 D TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; KEGG: drm:Dred_2463 Fis family transcriptional regulator; SMART: Toprim sub domain-containing protein; DNA primase 1201677..1203500 Desulfotomaculum ruminis DSM 2154 10737549 YP_004544732.1 CDS Desru_1171 NC_015589.1 1203497 1204597 D KEGG: drm:Dred_2462 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma factor RpoD 1203497..1204597 Desulfotomaculum ruminis DSM 2154 10737550 YP_004544733.1 CDS Desru_1172 NC_015589.1 1205363 1206442 D KEGG: pth:PTH_0707 hypothetical protein; manually curated; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; CRISPR-associated RAMP protein Cmr1 family 1205363..1206442 Desulfotomaculum ruminis DSM 2154 10737555 YP_004544734.1 CDS Desru_1173 NC_015589.1 1206444 1207802 D PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_4242 hypothetical protein; hypothetical protein 1206444..1207802 Desulfotomaculum ruminis DSM 2154 10737556 YP_004544735.1 CDS Desru_1174 NC_015589.1 1207799 1210642 D TIGRFAM: CRISPR-associated protein, Csx11 family; KEGG: cag:Cagg_3827 CRISPR-associated protein, Csx11 family; CRISPR-associated protein Csx11 family 1207799..1210642 Desulfotomaculum ruminis DSM 2154 10737557 YP_004544736.1 CDS Desru_1175 NC_015589.1 1210657 1211691 D KEGG: rca:Rcas_4240 CRISPR-associated RAMP Cmr4 family protein family protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; CRISPR-associated RAMP protein Cmr4 family 1210657..1211691 Desulfotomaculum ruminis DSM 2154 10737558 YP_004544737.1 CDS Desru_1176 NC_015589.1 1211666 1212067 D KEGG: rca:Rcas_4239 hypothetical protein; hypothetical protein 1211666..1212067 Desulfotomaculum ruminis DSM 2154 10737559 YP_004544738.1 CDS Desru_1177 NC_015589.1 1212073 1212942 D PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_4238 hypothetical protein; hypothetical protein 1212073..1212942 Desulfotomaculum ruminis DSM 2154 10737560 YP_004544739.1 CDS Desru_1178 NC_015589.1 1213090 1213365 D KEGG: pth:PTH_0396 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; AbrB family transcriptional regulator 1213090..1213365 Desulfotomaculum ruminis DSM 2154 10737561 YP_004544740.1 CDS Desru_1179 NC_015589.1 1213362 1213628 D KEGG: pth:PTH_0397 cytotoxic translational repressor; cytotoxic translational repressor 1213362..1213628 Desulfotomaculum ruminis DSM 2154 10737562 YP_004544741.1 CDS Desru_1180 NC_015589.1 1213975 1215864 D KEGG: drm:Dred_2461 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein 1213975..1215864 Desulfotomaculum ruminis DSM 2154 10737564 YP_004544742.1 CDS Desru_1181 NC_015589.1 1215990 1216721 D PFAM: protein of unknown function DUF633; KEGG: drm:Dred_2460 hypothetical protein; hypothetical protein 1215990..1216721 Desulfotomaculum ruminis DSM 2154 10737565 YP_004544743.1 CDS Desru_1182 NC_015589.1 1216712 1217830 D PFAM: protein of unknown function DUF34; KEGG: drm:Dred_2459 hypothetical protein; hypothetical protein 1216712..1217830 Desulfotomaculum ruminis DSM 2154 10737566 YP_004544744.1 CDS Desru_1183 NC_015589.1 1217889 1218611 D PFAM: protein of unknown function DUF164; KEGG: drm:Dred_2458 hypothetical protein; hypothetical protein 1217889..1218611 Desulfotomaculum ruminis DSM 2154 10737567 YP_004544745.1 CDS Desru_1184 NC_015589.1 1218652 1220442 R KEGG: drm:Dred_2457 oligoendopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; oligoendopeptidase F complement(1218652..1220442) Desulfotomaculum ruminis DSM 2154 10737568 YP_004544746.1 CDS Desru_1185 NC_015589.1 1220580 1221572 D KEGG: tro:trd_1612 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; 1-aminocyclopropane-1-carboxylate deaminase 1220580..1221572 Desulfotomaculum ruminis DSM 2154 10737569 YP_004544747.1 CDS Desru_1186 NC_015589.1 1221582 1222052 R KEGG: drm:Dred_2456 ribonuclease H; PFAM: ribonuclease H; Ribonuclease H complement(1221582..1222052) Desulfotomaculum ruminis DSM 2154 10737570 YP_004544748.1 CDS Desru_1187 NC_015589.1 1222155 1222718 D KEGG: bte:BTH_I0976 cell division protein FtsK; hypothetical protein 1222155..1222718 Desulfotomaculum ruminis DSM 2154 10737571 YP_004544749.1 CDS Desru_1188 NC_015589.1 1222864 1224054 D PFAM: flavodoxin/nitric oxide synthase; KEGG: mta:Moth_1287 beta-lactamase-like; flavodoxin/nitric oxide synthase 1222864..1224054 Desulfotomaculum ruminis DSM 2154 10737572 YP_004544750.1 CDS Desru_1189 NC_015589.1 1224086 1224832 D PFAM: flavin reductase domain protein FMN-binding; Rubredoxin-type Fe(Cys)4 protein; KEGG: dhd:Dhaf_2394 flavin reductase domain protein FMN-binding; flavin reductase domain-containing protein 1224086..1224832 Desulfotomaculum ruminis DSM 2154 10737573 YP_004544751.1 CDS Desru_1190 NC_015589.1 1225123 1225554 D KEGG: drm:Dred_1431 hypothetical protein; hypothetical protein 1225123..1225554 Desulfotomaculum ruminis DSM 2154 10737574 YP_004544752.1 CDS Desru_1191 NC_015589.1 1225619 1226080 R KEGG: drm:Dred_2455 hypothetical protein; hypothetical protein complement(1225619..1226080) Desulfotomaculum ruminis DSM 2154 10737575 YP_004544753.1 CDS Desru_1192 NC_015589.1 1226419 1227999 D PFAM: extracellular solute-binding protein family 5; KEGG: drm:Dred_2454 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1226419..1227999 Desulfotomaculum ruminis DSM 2154 10737576 YP_004544754.1 CDS Desru_1193 NC_015589.1 1228113 1229117 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2453 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1228113..1229117 Desulfotomaculum ruminis DSM 2154 10737577 YP_004544755.1 CDS Desru_1194 NC_015589.1 1229138 1230028 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2452 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1229138..1230028 Desulfotomaculum ruminis DSM 2154 10737578 YP_004544756.1 CDS Desru_1195 NC_015589.1 1230040 1231020 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_2451 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1230040..1231020 Desulfotomaculum ruminis DSM 2154 10737579 YP_004544757.1 CDS Desru_1196 NC_015589.1 1231020 1231994 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_2450 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1231020..1231994 Desulfotomaculum ruminis DSM 2154 10737580 YP_004544758.1 CDS Desru_1197 NC_015589.1 1232033 1233052 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gbm:Gbem_1202 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(1232033..1233052) Desulfotomaculum ruminis DSM 2154 10737581 YP_004544759.1 CDS Desru_1198 NC_015589.1 1233275 1233907 D KEGG: drm:Dred_2449 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD superfamily hydrolase 1233275..1233907 Desulfotomaculum ruminis DSM 2154 10737582 YP_004544760.1 CDS Desru_1199 NC_015589.1 1233979 1234740 D KEGG: drm:Dred_2448 hypothetical protein; hypothetical protein 1233979..1234740 Desulfotomaculum ruminis DSM 2154 10737583 YP_004544761.1 CDS Desru_1200 NC_015589.1 1234805 1235206 D PFAM: NUDIX hydrolase; KEGG: drm:Dred_2447 NUDIX hydrolase; NUDIX hydrolase 1234805..1235206 Desulfotomaculum ruminis DSM 2154 10737584 YP_004544762.1 CDS Desru_1201 NC_015589.1 1235337 1235843 D KEGG: drm:Dred_2446 hypothetical protein; hypothetical protein 1235337..1235843 Desulfotomaculum ruminis DSM 2154 10737585 YP_004544763.1 CDS Desru_1202 NC_015589.1 1235999 1236898 R KEGG: drm:Dred_2445 hypothetical protein; hypothetical protein complement(1235999..1236898) Desulfotomaculum ruminis DSM 2154 10737586 YP_004544764.1 CDS Desru_1203 NC_015589.1 1236996 1237850 R PFAM: 2-phosphosulfolactate phosphatase; KEGG: drm:Dred_2444 2-phosphosulfolactate phosphatase; 2-phosphosulfolactate phosphatase complement(1236996..1237850) Desulfotomaculum ruminis DSM 2154 10737587 YP_004544765.1 CDS Desru_1204 NC_015589.1 1238124 1238906 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: drm:Dred_2443 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1238124..1238906 Desulfotomaculum ruminis DSM 2154 10737588 YP_004544766.1 CDS Desru_1205 NC_015589.1 1238906 1239673 D PFAM: OmpA/MotB domain protein; KEGG: drm:Dred_2442 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 1238906..1239673 Desulfotomaculum ruminis DSM 2154 10737589 YP_004544767.1 CDS Desru_1206 NC_015589.1 1239695 1240174 D KEGG: drm:Dred_2441 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW domain-containing protein 1239695..1240174 Desulfotomaculum ruminis DSM 2154 10737590 YP_004544768.1 CDS Desru_1207 NC_015589.1 1240197 1242287 D KEGG: drm:Dred_2440 CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; P2 response regulator binding domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain-containing protein 1240197..1242287 Desulfotomaculum ruminis DSM 2154 10737591 YP_004544769.1 CDS Desru_1208 NC_015589.1 1242277 1243362 D KEGG: drm:Dred_2439 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; CheB methylesterase 1242277..1243362 Desulfotomaculum ruminis DSM 2154 10737592 YP_004544770.1 CDS Desru_1209 NC_015589.1 1243433 1243735 D KEGG: drm:Dred_2438 putative anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein; anti-sigma-28 factor FlgM family protein 1243433..1243735 Desulfotomaculum ruminis DSM 2154 10737593 YP_004544771.1 CDS Desru_1210 NC_015589.1 1243764 1244243 D PFAM: FlgN family protein; KEGG: drm:Dred_2437 hypothetical protein; FlgN family protein 1243764..1244243 Desulfotomaculum ruminis DSM 2154 10737594 YP_004544772.1 CDS Desru_1211 NC_015589.1 1244260 1245690 D KEGG: mta:Moth_0746 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 1244260..1245690 Desulfotomaculum ruminis DSM 2154 10737595 YP_004544773.1 CDS Desru_1212 NC_015589.1 1245694 1246722 D KEGG: mta:Moth_0747 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 1245694..1246722 Desulfotomaculum ruminis DSM 2154 10737596 YP_004544774.1 CDS Desru_1213 NC_015589.1 1246761 1247120 D KEGG: drm:Dred_2434 hypothetical protein; hypothetical protein 1246761..1247120 Desulfotomaculum ruminis DSM 2154 10737597 YP_004544775.1 CDS Desru_1214 NC_015589.1 1247328 1248146 D PFAM: flagellin domain protein; KEGG: cbf:CLI_2781 flagellin; flagellin domain-containing protein 1247328..1248146 Desulfotomaculum ruminis DSM 2154 10737598 YP_004544776.1 CDS Desru_1215 NC_015589.1 1248213 1250048 D PFAM: protein of unknown function DUF115; KEGG: tit:Thit_0477 protein of unknown function DUF115; hypothetical protein 1248213..1250048 Desulfotomaculum ruminis DSM 2154 10737599 YP_004544777.1 CDS Desru_1216 NC_015589.1 1250066 1250419 D KEGG: cth:Cthe_2234 hypothetical protein; hypothetical protein 1250066..1250419 Desulfotomaculum ruminis DSM 2154 10737600 YP_004544778.1 CDS Desru_1217 NC_015589.1 1250574 1251560 D KEGG: rpf:Rpic12D_0580 polysaccharide biosynthesis protein CapD; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: polysaccharide biosynthesis protein CapD; UDP-N-acetylglucosamine 4,6-dehydratase 1250574..1251560 Desulfotomaculum ruminis DSM 2154 10737601 YP_004544779.1 CDS Desru_1218 NC_015589.1 1251560 1252720 D KEGG: npu:Npun_R0689 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 1251560..1252720 Desulfotomaculum ruminis DSM 2154 10737602 YP_004544780.1 CDS Desru_1219 NC_015589.1 1252717 1253454 D PFAM: acylneuraminate cytidylyltransferase; KEGG: npu:Npun_R0688 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 1252717..1253454 Desulfotomaculum ruminis DSM 2154 10737603 YP_004544781.1 CDS Desru_1220 NC_015589.1 1253451 1254548 D KEGG: bcg:BCG9842_B1722 pseudaminic acid biosynthesis-associated protein PseG; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; PFAM: Glycosyltransferase 28 domain; pseudaminic acid biosynthesis-associated protein PseG 1253451..1254548 Desulfotomaculum ruminis DSM 2154 10737604 YP_004544782.1 CDS Desru_1221 NC_015589.1 1254550 1255110 D TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; KEGG: rpf:Rpic12D_0586 GCN5-related N-acetyltransferase; pseudaminic acid biosynthesis N-acetyl transferase 1254550..1255110 Desulfotomaculum ruminis DSM 2154 10737605 YP_004544783.1 CDS Desru_1223 NC_015589.1 1255788 1256510 D PFAM: LmbE family protein; KEGG: swo:Swol_0211 putative LmbE-like protein; LmbE family protein 1255788..1256510 Desulfotomaculum ruminis DSM 2154 10737607 YP_004544784.1 CDS Desru_1224 NC_015589.1 1256597 1257649 D TIGRFAM: pseudaminic acid synthase; KEGG: npu:Npun_R0684 N-acetylneuraminic acid synthase domain-containing protein; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; pseudaminic acid synthase 1256597..1257649 Desulfotomaculum ruminis DSM 2154 10737608 YP_004544785.1 CDS Desru_1225 NC_015589.1 1258098 1259321 D KEGG: dae:Dtox_0663 hypothetical protein; hypothetical protein 1258098..1259321 Desulfotomaculum ruminis DSM 2154 10737609 YP_004544786.1 CDS Desru_1226 NC_015589.1 1259615 1262119 D PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: cth:Cthe_2218 flagellar hook-associated 2-like protein; flagellar hook-associated 2 domain-containing protein 1259615..1262119 Desulfotomaculum ruminis DSM 2154 10737610 YP_004544787.1 CDS Desru_1227 NC_015589.1 1262159 1262404 R KEGG: drm:Dred_2417 carbon storage regulator, CsrA; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; carbon storage regulator complement(1262159..1262404) Desulfotomaculum ruminis DSM 2154 10737611 YP_004544788.1 CDS Desru_1228 NC_015589.1 1262405 1262827 R PFAM: protein of unknown function DUF180; KEGG: drm:Dred_2416 hypothetical protein; hypothetical protein complement(1262405..1262827) Desulfotomaculum ruminis DSM 2154 10737612 YP_004544789.1 CDS Desru_1229 NC_015589.1 1262987 1263376 D KEGG: drm:Dred_2415 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS 1262987..1263376 Desulfotomaculum ruminis DSM 2154 10737613 YP_004544790.1 CDS Desru_1230 NC_015589.1 1263366 1263773 D KEGG: drm:Dred_2414 hypothetical protein; hypothetical protein 1263366..1263773 Desulfotomaculum ruminis DSM 2154 10737614 YP_004544791.1 CDS Desru_1231 NC_015589.1 1263797 1264171 D PFAM: flagellar protein FlaG protein; KEGG: drm:Dred_2413 flagellar protein FlaG protein; flagellar protein FlaG protein 1263797..1264171 Desulfotomaculum ruminis DSM 2154 10737615 YP_004544792.1 CDS Desru_1232 NC_015589.1 1264249 1264629 R PFAM: protein of unknown function DUF86; KEGG: drm:Dred_2423 hypothetical protein; hypothetical protein complement(1264249..1264629) Desulfotomaculum ruminis DSM 2154 10737616 YP_004544793.1 CDS Desru_1233 NC_015589.1 1264626 1265021 R PFAM: DNA polymerase beta domain protein region; KEGG: drm:Dred_2422 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein complement(1264626..1265021) Desulfotomaculum ruminis DSM 2154 10737617 YP_004544794.1 CDS Desru_1234 NC_015589.1 1265234 1266307 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: drm:Dred_2412 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 1265234..1266307 Desulfotomaculum ruminis DSM 2154 10737618 YP_004544795.1 CDS Desru_1235 NC_015589.1 1266710 1267111 D KEGG: drm:Dred_2411 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgB 1266710..1267111 Desulfotomaculum ruminis DSM 2154 10737619 YP_004544796.1 CDS Desru_1236 NC_015589.1 1267119 1267556 D KEGG: drm:Dred_2410 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgC 1267119..1267556 Desulfotomaculum ruminis DSM 2154 10737620 YP_004544797.1 CDS Desru_1237 NC_015589.1 1267570 1267860 D KEGG: drm:Dred_2409 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 1267570..1267860 Desulfotomaculum ruminis DSM 2154 10737621 YP_004544798.1 CDS Desru_1238 NC_015589.1 1267884 1269443 D KEGG: drm:Dred_2408 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF 1267884..1269443 Desulfotomaculum ruminis DSM 2154 10737622 YP_004544799.1 CDS Desru_1239 NC_015589.1 1269456 1270469 D KEGG: drm:Dred_2407 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 1269456..1270469 Desulfotomaculum ruminis DSM 2154 10737623 YP_004544800.1 CDS Desru_1240 NC_015589.1 1270462 1271172 D PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: drm:Dred_2406 flagellar biosynthesis/type III secretory pathway protein-like protein; flagellar assembly protein FliH/type III secretion system HrpE 1270462..1271172 Desulfotomaculum ruminis DSM 2154 10737624 YP_004544801.1 CDS Desru_1241 NC_015589.1 1271177 1272508 D TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: drm:Dred_2405 flagellar protein export ATPase FliI; SMART: AAA ATPase; FliI/YscN family ATPase 1271177..1272508 Desulfotomaculum ruminis DSM 2154 10737625 YP_004544802.1 CDS Desru_1242 NC_015589.1 1272511 1272945 D TIGRFAM: flagellar export protein FliJ; KEGG: drm:Dred_2404 flagellar export protein FliJ; flagellar export protein FliJ 1272511..1272945 Desulfotomaculum ruminis DSM 2154 10737626 YP_004544803.1 CDS Desru_1243 NC_015589.1 1272976 1274205 D PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: drm:Dred_2403 flagellar hook-length control protein; flagellar hook-length control protein-like protein 1272976..1274205 Desulfotomaculum ruminis DSM 2154 10737627 YP_004544804.1 CDS Desru_1244 NC_015589.1 1274218 1274715 D PFAM: flagellar hook capping protein; KEGG: drm:Dred_2402 flagellar hook capping protein; flagellar hook capping protein 1274218..1274715 Desulfotomaculum ruminis DSM 2154 10737628 YP_004544805.1 CDS Desru_1245 NC_015589.1 1274639 1275043 D KEGG: dae:Dtox_0695 flagellar operon protein; manually curated; TIGRFAM: flagellar operon protein; flagellar operon protein 1274639..1275043 Desulfotomaculum ruminis DSM 2154 10737629 YP_004544806.1 CDS Desru_1246 NC_015589.1 1275114 1275935 D KEGG: bha:BH2449 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-basal body protein 1275114..1275935 Desulfotomaculum ruminis DSM 2154 10737630 YP_004544807.1 CDS Desru_1247 NC_015589.1 1275982 1276473 D PFAM: flagellar basal body-associated protein FliL; KEGG: drm:Dred_2399 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 1275982..1276473 Desulfotomaculum ruminis DSM 2154 10737631 YP_004544808.1 CDS Desru_1248 NC_015589.1 1276485 1276868 D PFAM: surface presentation of antigens (SPOA) protein; KEGG: drm:Dred_2398 surface presentation of antigens (SpoA) protein; surface presentation of antigens (SPOA) protein 1276485..1276868 Desulfotomaculum ruminis DSM 2154 10737632 YP_004544809.1 CDS Desru_1249 NC_015589.1 1276869 1277306 D KEGG: drm:Dred_2397 hypothetical protein; hypothetical protein 1276869..1277306 Desulfotomaculum ruminis DSM 2154 10737633 YP_004544810.1 CDS Desru_1250 NC_015589.1 1277269 1278054 D KEGG: drm:Dred_2396 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 1277269..1278054 Desulfotomaculum ruminis DSM 2154 10737634 YP_004544811.1 CDS Desru_1251 NC_015589.1 1278068 1278337 D KEGG: drm:Dred_2395 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; flagellar biosynthetic protein FliQ 1278068..1278337 Desulfotomaculum ruminis DSM 2154 10737635 YP_004544812.1 CDS Desru_1252 NC_015589.1 1278347 1279117 D KEGG: drm:Dred_2394 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 1278347..1279117 Desulfotomaculum ruminis DSM 2154 10737636 YP_004544813.1 CDS Desru_1253 NC_015589.1 1279117 1280178 D KEGG: drm:Dred_2393 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 1279117..1280178 Desulfotomaculum ruminis DSM 2154 10737637 YP_004544814.1 CDS Desru_1254 NC_015589.1 1280209 1282281 D KEGG: drm:Dred_2392 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA 1280209..1282281 Desulfotomaculum ruminis DSM 2154 10737638 YP_004544815.1 CDS Desru_1255 NC_015589.1 1282278 1283519 D TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: drm:Dred_2391 flagellar biosynthesis regulator FlhF; SMART: AAA ATPase; flagellar biosynthetic protein FlhF 1282278..1283519 Desulfotomaculum ruminis DSM 2154 10737639 YP_004544816.1 CDS Desru_1256 NC_015589.1 1283497 1284363 D KEGG: drm:Dred_2390 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 1283497..1284363 Desulfotomaculum ruminis DSM 2154 10737640 YP_004544817.1 CDS Desru_1257 NC_015589.1 1284368 1285039 D PFAM: type IV pilus assembly PilZ; KEGG: drm:Dred_2389 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1284368..1285039 Desulfotomaculum ruminis DSM 2154 10737641 YP_004544818.1 CDS Desru_1258 NC_015589.1 1285054 1285809 D KEGG: drm:Dred_2388 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; FliA/WhiG family RNA polymerase sigma factor 1285054..1285809 Desulfotomaculum ruminis DSM 2154 10737642 YP_004544819.1 CDS Desru_1259 NC_015589.1 1285824 1286600 D KEGG: drm:Dred_2387 hypothetical protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar hook-basal body protein 1285824..1286600 Desulfotomaculum ruminis DSM 2154 10737643 YP_004544820.1 CDS Desru_1260 NC_015589.1 1286623 1287411 D KEGG: drm:Dred_2386 hypothetical protein; TIGRFAM: fagellar hook-basal body protein; flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-basal body protein 1286623..1287411 Desulfotomaculum ruminis DSM 2154 10737644 YP_004544821.1 CDS Desru_1261 NC_015589.1 1287457 1287957 D PFAM: CheD family protein; KEGG: drm:Dred_2385 CheD, stimulates methylation of MCP proteins; CheD family protein 1287457..1287957 Desulfotomaculum ruminis DSM 2154 10737645 YP_004544822.1 CDS Desru_1262 NC_015589.1 1287957 1288727 D PFAM: MCP methyltransferase CheR-type; KEGG: drm:Dred_2384 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; protein-glutamate O-methyltransferase 1287957..1288727 Desulfotomaculum ruminis DSM 2154 10737646 YP_004544823.1 CDS Desru_1263 NC_015589.1 1288761 1289378 D PFAM: CheC domain protein; KEGG: drm:Dred_2383 CheC, inhibitor of MCP methylation; CheC domain-containing protein 1288761..1289378 Desulfotomaculum ruminis DSM 2154 10737647 YP_004544824.1 CDS Desru_1264 NC_015589.1 1289400 1289768 D KEGG: drm:Dred_2382 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 1289400..1289768 Desulfotomaculum ruminis DSM 2154 10737648 YP_004544825.1 CDS Desru_1265 NC_015589.1 1289807 1290802 D KEGG: drm:Dred_2381 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 1289807..1290802 Desulfotomaculum ruminis DSM 2154 10737649 YP_004544826.1 CDS Desru_1266 NC_015589.1 1290795 1292009 D KEGG: drm:Dred_2380 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; flagellar motor switch protein FliN 1290795..1292009 Desulfotomaculum ruminis DSM 2154 10737650 YP_004544827.1 CDS Desru_1267 NC_015589.1 1292042 1292479 R KEGG: drm:Dred_2379 hypothetical protein; hypothetical protein complement(1292042..1292479) Desulfotomaculum ruminis DSM 2154 10737651 YP_004544828.1 CDS Desru_1268 NC_015589.1 1292499 1292822 R PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: drm:Dred_2378 MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase complement(1292499..1292822) Desulfotomaculum ruminis DSM 2154 10737652 YP_004544829.1 CDS Desru_1269 NC_015589.1 1292973 1293686 D KEGG: drm:Dred_2377 hypothetical protein; hypothetical protein 1292973..1293686 Desulfotomaculum ruminis DSM 2154 10737653 YP_004544830.1 CDS Desru_1270 NC_015589.1 1293842 1294381 D TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: drm:Dred_2376 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1293842..1294381 Desulfotomaculum ruminis DSM 2154 10737654 YP_004544831.1 CDS Desru_1271 NC_015589.1 1294472 1296013 D KEGG: drm:Dred_2375 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; GMP synthase large subunit 1294472..1296013 Desulfotomaculum ruminis DSM 2154 10737655 YP_004544832.1 CDS Desru_1272 NC_015589.1 1296243 1296365 D hypothetical protein 1296243..1296365 Desulfotomaculum ruminis DSM 2154 10737656 YP_004544833.1 CDS Desru_1273 NC_015589.1 1296534 1297031 D KEGG: drm:Dred_0460 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein 1296534..1297031 Desulfotomaculum ruminis DSM 2154 10737657 YP_004544834.1 CDS Desru_1274 NC_015589.1 1297152 1297451 D KEGG: nca:Noca_4014 hypothetical protein; hypothetical protein 1297152..1297451 Desulfotomaculum ruminis DSM 2154 10737658 YP_004544835.1 CDS Desru_1275 NC_015589.1 1298043 1299419 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: drm:Dred_2372 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 1298043..1299419 Desulfotomaculum ruminis DSM 2154 10737659 YP_004544836.1 CDS Desru_1276 NC_015589.1 1299438 1299953 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: drm:Dred_2371 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1299438..1299953 Desulfotomaculum ruminis DSM 2154 10737660 YP_004544837.1 CDS Desru_1277 NC_015589.1 1299984 1301276 D KEGG: drm:Dred_2370 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; adenylosuccinate lyase 1299984..1301276 Desulfotomaculum ruminis DSM 2154 10737661 YP_004544838.1 CDS Desru_1278 NC_015589.1 1301294 1302001 D TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: drm:Dred_2369 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1301294..1302001 Desulfotomaculum ruminis DSM 2154 10737662 YP_004544839.1 CDS Desru_1279 NC_015589.1 1302268 1302516 D KEGG: drm:Dred_2368 phosphoribosylformylglycinamidine synthase, PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; phosphoribosylformylglycinamidine synthase purS 1302268..1302516 Desulfotomaculum ruminis DSM 2154 10737663 YP_004544840.1 CDS Desru_1280 NC_015589.1 1302520 1303221 D KEGG: drm:Dred_2367 phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 1302520..1303221 Desulfotomaculum ruminis DSM 2154 10737664 YP_004544841.1 CDS Desru_1281 NC_015589.1 1303222 1305441 D TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: drm:Dred_2366 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase II 1303222..1305441 Desulfotomaculum ruminis DSM 2154 10737665 YP_004544842.1 CDS Desru_1282 NC_015589.1 1305426 1306850 D KEGG: drm:Dred_2365 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 1305426..1306850 Desulfotomaculum ruminis DSM 2154 10737666 YP_004544843.1 CDS Desru_1283 NC_015589.1 1306862 1307914 D TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: drm:Dred_2364 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 1306862..1307914 Desulfotomaculum ruminis DSM 2154 10737667 YP_004544844.1 CDS Desru_1284 NC_015589.1 1307926 1308552 D KEGG: drm:Dred_2363 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 1307926..1308552 Desulfotomaculum ruminis DSM 2154 10737668 YP_004544845.1 CDS Desru_1285 NC_015589.1 1308583 1310127 D SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: drm:Dred_2362 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1308583..1310127 Desulfotomaculum ruminis DSM 2154 10737669 YP_004544846.1 CDS Desru_1286 NC_015589.1 1310351 1311619 D TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: drm:Dred_2361 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine--glycine ligase 1310351..1311619 Desulfotomaculum ruminis DSM 2154 10737670 YP_004544847.1 CDS Desru_1287 NC_015589.1 1311776 1312099 D KEGG: drm:Dred_2360 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; TrpR like protein YerC/YecD 1311776..1312099 Desulfotomaculum ruminis DSM 2154 10737671 YP_004544848.1 CDS Desru_1288 NC_015589.1 1312113 1313318 D TIGRFAM: histidyl-tRNA synthetase 2; KEGG: drm:Dred_2359 histidine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); histidyl-tRNA synthetase 2 1312113..1313318 Desulfotomaculum ruminis DSM 2154 10737672 YP_004544849.1 CDS Desru_1289 NC_015589.1 1313451 1314113 D TIGRFAM: ATP phosphoribosyltransferase; KEGG: drm:Dred_2356 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 1313451..1314113 Desulfotomaculum ruminis DSM 2154 10737673 YP_004544850.1 CDS Desru_1290 NC_015589.1 1314110 1315408 D TIGRFAM: histidinol dehydrogenase; KEGG: drm:Dred_2355 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase 1314110..1315408 Desulfotomaculum ruminis DSM 2154 10737674 YP_004544851.1 CDS Desru_1291 NC_015589.1 1315460 1316545 D KEGG: drm:Dred_2354 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 1315460..1316545 Desulfotomaculum ruminis DSM 2154 10737675 YP_004544852.1 CDS Desru_1292 NC_015589.1 1316547 1317143 D KEGG: drm:Dred_2353 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1316547..1317143 Desulfotomaculum ruminis DSM 2154 10737676 YP_004544853.1 CDS Desru_1293 NC_015589.1 1317140 1317751 D KEGG: drm:Dred_2352 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase glutamine amidotransferase subunit 1317140..1317751 Desulfotomaculum ruminis DSM 2154 10737677 YP_004544854.1 CDS Desru_1294 NC_015589.1 1317748 1318479 D TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: drm:Dred_2351 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1317748..1318479 Desulfotomaculum ruminis DSM 2154 10737678 YP_004544855.1 CDS Desru_1295 NC_015589.1 1318482 1319240 D KEGG: drm:Dred_2350 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; imidazoleglycerol phosphate synthase cyclase subunit 1318482..1319240 Desulfotomaculum ruminis DSM 2154 10737679 YP_004544856.1 CDS Desru_1296 NC_015589.1 1319258 1319947 D KEGG: drm:Dred_2349 phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase 1319258..1319947 Desulfotomaculum ruminis DSM 2154 10737680 YP_004544857.1 CDS Desru_1297 NC_015589.1 1320106 1320510 D KEGG: ttm:Tthe_0277 hypothetical protein; hypothetical protein 1320106..1320510 Desulfotomaculum ruminis DSM 2154 10737681 YP_004544858.1 CDS Desru_1298 NC_015589.1 1320725 1322884 D KEGG: drm:Dred_2348 ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase PcrA 1320725..1322884 Desulfotomaculum ruminis DSM 2154 10737682 YP_004544859.1 CDS Desru_1299 NC_015589.1 1322914 1323792 D KEGG: drm:Dred_2347 hypothetical protein; hypothetical protein 1322914..1323792 Desulfotomaculum ruminis DSM 2154 10737683 YP_004544860.1 CDS Desru_1300 NC_015589.1 1323830 1325848 D TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein; KEGG: drm:Dred_2346 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; NAD-dependent DNA ligase 1323830..1325848 Desulfotomaculum ruminis DSM 2154 10737684 YP_004544861.1 CDS Desru_1301 NC_015589.1 1326158 1327333 D KEGG: drm:Dred_2345 pyrrolo-quinoline quinone; pyrrolo-quinoline quinone 1326158..1327333 Desulfotomaculum ruminis DSM 2154 10737685 YP_004544862.1 CDS Desru_1302 NC_015589.1 1327335 1328696 D PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2344 S-layer domain-containing protein; S-layer protein 1327335..1328696 Desulfotomaculum ruminis DSM 2154 10737686 YP_004544863.1 CDS Desru_1303 NC_015589.1 1328737 1329186 R KEGG: drm:Dred_2343 putative endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(1328737..1329186) Desulfotomaculum ruminis DSM 2154 10737687 YP_004544864.1 CDS Desru_1304 NC_015589.1 1329354 1329635 D KEGG: drm:Dred_2342 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 1329354..1329635 Desulfotomaculum ruminis DSM 2154 10737688 YP_004544865.1 CDS Desru_1305 NC_015589.1 1329868 1331325 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: drm:Dred_2341 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 1329868..1331325 Desulfotomaculum ruminis DSM 2154 10737689 YP_004544866.1 CDS Desru_1306 NC_015589.1 1331340 1332779 D KEGG: drm:Dred_2340 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 1331340..1332779 Desulfotomaculum ruminis DSM 2154 10737690 YP_004544867.1 CDS Desru_1307 NC_015589.1 1333134 1334267 D KEGG: drm:Dred_2339 trans-homoaconitate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; homocitrate synthase 1333134..1334267 Desulfotomaculum ruminis DSM 2154 10737691 YP_004544868.1 CDS Desru_1308 NC_015589.1 1334269 1335525 D manually curated; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; KEGG: drm:Dred_2338 homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein; homoaconitate hydratase family protein 1334269..1335525 Desulfotomaculum ruminis DSM 2154 10737692 YP_004544869.1 CDS Desru_1309 NC_015589.1 1335535 1336044 D KEGG: drm:Dred_2337 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit 1335535..1336044 Desulfotomaculum ruminis DSM 2154 10737693 YP_004544870.1 CDS Desru_1310 NC_015589.1 1336048 1337046 D TIGRFAM: isocitrate dehydrogenase, NAD-dependent; KEGG: pth:PTH_2517 isocitrate/isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase NAD-dependent 1336048..1337046 Desulfotomaculum ruminis DSM 2154 10737694 YP_004544871.1 CDS Desru_1311 NC_015589.1 1337345 1337974 D PFAM: Methyltransferase type 11; KEGG: mbu:Mbur_2332 UbiE/COQ5 methyltransferase; type 11 methyltransferase 1337345..1337974 Desulfotomaculum ruminis DSM 2154 10737695 YP_004544872.1 CDS Desru_1312 NC_015589.1 1338091 1338504 D KEGG: dau:Daud_0574 hypothetical protein; hypothetical protein 1338091..1338504 Desulfotomaculum ruminis DSM 2154 10737696 YP_004544873.1 CDS Desru_1313 NC_015589.1 1338791 1339216 D KEGG: cdf:CD2911 phage protein; phage protein 1338791..1339216 Desulfotomaculum ruminis DSM 2154 10737697 YP_004544874.1 CDS Desru_1314 NC_015589.1 1339221 1339412 D KEGG: cpy:Cphy_2959 hypothetical protein; hypothetical protein 1339221..1339412 Desulfotomaculum ruminis DSM 2154 10737698 YP_004544875.1 CDS Desru_1315 NC_015589.1 1339415 1340719 D KEGG: cdl:CDR20291_1441 phage protein; phage protein 1339415..1340719 Desulfotomaculum ruminis DSM 2154 10737699 YP_004544876.1 CDS Desru_1316 NC_015589.1 1340736 1341203 D PFAM: XkdM protein, phage-like element PBSX; KEGG: cdf:CD2909 phage protein; XkdM protein phage-like element PBSX 1340736..1341203 Desulfotomaculum ruminis DSM 2154 10737700 YP_004544877.1 CDS Desru_1317 NC_015589.1 1341222 1341650 D PFAM: XkdN-like protein; KEGG: cdl:CDR20291_1444 phage protein; XkdN-like protein 1341222..1341650 Desulfotomaculum ruminis DSM 2154 10737701 YP_004544878.1 CDS Desru_1318 NC_015589.1 1341880 1343514 D KEGG: lsp:Bsph_1782 putative phage tail tape measure protein; hypothetical protein 1341880..1343514 Desulfotomaculum ruminis DSM 2154 10737702 YP_004544879.1 CDS Desru_1319 NC_015589.1 1343514 1344164 D KEGG: cpy:Cphy_2954 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein 1343514..1344164 Desulfotomaculum ruminis DSM 2154 10737703 YP_004544880.1 CDS Desru_1320 NC_015589.1 1344157 1345116 D KEGG: cdl:CDR20291_1451 putative phage cell wall hydrolase; putative phage cell wall hydrolase 1344157..1345116 Desulfotomaculum ruminis DSM 2154 10737704 YP_004544881.1 CDS Desru_1321 NC_015589.1 1345109 1345516 D KEGG: str:Sterm_1444 hypothetical protein; hypothetical protein 1345109..1345516 Desulfotomaculum ruminis DSM 2154 10737705 YP_004544882.1 CDS Desru_1322 NC_015589.1 1345513 1345914 D KEGG: cpy:Cphy_2951 phage protein; phage protein 1345513..1345914 Desulfotomaculum ruminis DSM 2154 10737706 YP_004544883.1 CDS Desru_1323 NC_015589.1 1345914 1346969 D PFAM: Baseplate J family protein; KEGG: cdf:CD2900 putative phage tail protein; baseplate J family protein 1345914..1346969 Desulfotomaculum ruminis DSM 2154 10737707 YP_004544884.1 CDS Desru_1324 NC_015589.1 1346962 1347510 D KEGG: cpy:Cphy_2949 hypothetical protein; hypothetical protein 1346962..1347510 Desulfotomaculum ruminis DSM 2154 10737708 YP_004544885.1 CDS Desru_1325 NC_015589.1 1347510 1347782 D KEGG: cbe:Cbei_0926 hypothetical protein; hypothetical protein 1347510..1347782 Desulfotomaculum ruminis DSM 2154 10737709 YP_004544886.1 CDS Desru_1326 NC_015589.1 1347783 1348865 D hypothetical protein 1347783..1348865 Desulfotomaculum ruminis DSM 2154 10737710 YP_004544887.1 CDS Desru_1328 NC_015589.1 1348879 1349238 D KEGG: act:ACLA_030660 translation regulator (Cya5), putative; hypothetical protein 1348879..1349238 Desulfotomaculum ruminis DSM 2154 10737711 YP_004544888.1 CDS Desru_1329 NC_015589.1 1349231 1349362 D KEGG: pjd:Pjdr2_1561 phage uncharacterized protein, XkdX family; TIGRFAM: phage uncharacterized protein, XkdX family; PFAM: uncharacterised protein XkdX; phage protein XkdX family 1349231..1349362 Desulfotomaculum ruminis DSM 2154 10737712 YP_004544889.1 CDS Desru_1330 NC_015589.1 1349700 1350089 D KEGG: drm:Dred_2336 carbohydrate-binding family 25 protein; carbohydrate-binding family 25 protein 1349700..1350089 Desulfotomaculum ruminis DSM 2154 10737713 YP_004544890.1 CDS Desru_1331 NC_015589.1 1350394 1350519 R hypothetical protein complement(1350394..1350519) Desulfotomaculum ruminis DSM 2154 10737714 YP_004544891.1 CDS Desru_1332 NC_015589.1 1350706 1351935 D PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2335 glycosyl transferase, group 1; group 1 glycosyl transferase 1350706..1351935 Desulfotomaculum ruminis DSM 2154 10737715 YP_004544892.1 CDS Desru_1333 NC_015589.1 1352027 1354510 D PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: drm:Dred_2334 nucleotidyl transferase; nucleotidyltransferase 1352027..1354510 Desulfotomaculum ruminis DSM 2154 10737716 YP_004544893.1 CDS Desru_1334 NC_015589.1 1354607 1355809 D PFAM: Threonyl/alanyl tRNA synthetase SAD; Alanyl-tRNA synthetase, class IIc-like; KEGG: drm:Dred_2333 phage tail protein I; threonyl/alanyl tRNA synthetase SAD 1354607..1355809 Desulfotomaculum ruminis DSM 2154 10737717 YP_004544894.1 CDS Desru_1335 NC_015589.1 1355846 1356304 R KEGG: drm:Dred_2332 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase complement(1355846..1356304) Desulfotomaculum ruminis DSM 2154 10737718 YP_004544895.1 CDS Desru_1336 NC_015589.1 1356304 1356978 R SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: drm:Dred_2331 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III complement(1356304..1356978) Desulfotomaculum ruminis DSM 2154 10737719 YP_004544896.1 CDS Desru_1337 NC_015589.1 1356968 1357390 R PFAM: CoA-binding domain protein; KEGG: drm:Dred_2330 CoA-binding domain-containing protein; CoA-binding domain-containing protein complement(1356968..1357390) Desulfotomaculum ruminis DSM 2154 10737720 YP_004544897.1 CDS Desru_1338 NC_015589.1 1357488 1357799 D PFAM: protein of unknown function DUF340 membrane; KEGG: drm:Dred_2329 hypothetical protein; hypothetical protein 1357488..1357799 Desulfotomaculum ruminis DSM 2154 10737721 YP_004544898.1 CDS Desru_1339 NC_015589.1 1357875 1358462 D PFAM: protein of unknown function DUF340 membrane; KEGG: drm:Dred_2328 protein of unknown function DUF340, membrane; hypothetical protein 1357875..1358462 Desulfotomaculum ruminis DSM 2154 10737722 YP_004544899.1 CDS Desru_1340 NC_015589.1 1358536 1359222 R PFAM: Abortive infection protein; KEGG: drm:Dred_2327 abortive infection protein; abortive infection protein complement(1358536..1359222) Desulfotomaculum ruminis DSM 2154 10737723 YP_004544900.1 CDS Desru_1341 NC_015589.1 1359459 1360178 D KEGG: drm:Dred_2326 hypothetical protein; hypothetical protein 1359459..1360178 Desulfotomaculum ruminis DSM 2154 10737724 YP_004544901.1 CDS Desru_1342 NC_015589.1 1360198 1361814 D KEGG: drm:Dred_2325 glycoside hydrolase family protein; manually curated; PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; hypothetical protein 1360198..1361814 Desulfotomaculum ruminis DSM 2154 10737725 YP_004544902.1 CDS Desru_1343 NC_015589.1 1362110 1362829 D PFAM: LmbE family protein; KEGG: drm:Dred_2324 LmbE family protein; LmbE family protein 1362110..1362829 Desulfotomaculum ruminis DSM 2154 10737726 YP_004544903.1 CDS Desru_1344 NC_015589.1 1362826 1363938 D PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2323 glycosyl transferase, group 1; group 1 glycosyl transferase 1362826..1363938 Desulfotomaculum ruminis DSM 2154 10737727 YP_004544904.1 CDS Desru_1345 NC_015589.1 1363950 1364273 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: drm:Dred_2322 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1363950..1364273 Desulfotomaculum ruminis DSM 2154 10737728 YP_004544905.1 CDS Desru_1346 NC_015589.1 1364308 1365111 D PFAM: NLP/P60 protein; KEGG: drm:Dred_2321 NLP/P60 protein; NLP/P60 protein 1364308..1365111 Desulfotomaculum ruminis DSM 2154 10737729 YP_004544906.1 CDS Desru_1347 NC_015589.1 1365198 1365890 D PFAM: Protein of unknown function DUF2225; KEGG: drm:Dred_2320 tetratricopeptide domain-containing protein; hypothetical protein 1365198..1365890 Desulfotomaculum ruminis DSM 2154 10737730 YP_004544907.1 CDS Desru_1348 NC_015589.1 1366068 1369727 D SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: drm:Dred_2319 DNA polymerase III DnaE; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha 1366068..1369727 Desulfotomaculum ruminis DSM 2154 10737731 YP_004544908.1 CDS Desru_1349 NC_015589.1 1369805 1370455 D PFAM: TrkA-C domain protein; KEGG: drm:Dred_2318 TrkA domain-containing protein; TrkA-C domain-containing protein 1369805..1370455 Desulfotomaculum ruminis DSM 2154 10737732 YP_004544909.1 CDS Desru_1350 NC_015589.1 1370541 1370771 D PFAM: tryptophan RNA-binding attenuator protein; KEGG: pth:PTH_2219 transcription attenuation protein MtrB; tryptophan RNA-binding attenuator protein 1370541..1370771 Desulfotomaculum ruminis DSM 2154 10737733 YP_004544910.1 CDS Desru_1351 NC_015589.1 1370999 1371190 D KEGG: drm:Dred_2316 hypothetical protein; hypothetical protein 1370999..1371190 Desulfotomaculum ruminis DSM 2154 10737734 YP_004544911.1 CDS Desru_1352 NC_015589.1 1371217 1372068 D KEGG: drm:Dred_2315 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase; acetyl-CoA carboxylase carboxyl transferase subunit beta 1371217..1372068 Desulfotomaculum ruminis DSM 2154 10737735 YP_004544912.1 CDS Desru_1353 NC_015589.1 1372087 1373031 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: drm:Dred_2314 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; acetyl-CoA carboxylase carboxyl transferase subunit alpha 1372087..1373031 Desulfotomaculum ruminis DSM 2154 10737736 YP_004544913.1 CDS Desru_1354 NC_015589.1 1373120 1374082 D KEGG: drm:Dred_2313 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 1373120..1374082 Desulfotomaculum ruminis DSM 2154 10737737 YP_004544914.1 CDS Desru_1355 NC_015589.1 1374109 1375860 D KEGG: drm:Dred_2312 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region; pyruvate kinase 1374109..1375860 Desulfotomaculum ruminis DSM 2154 10737738 YP_004544915.1 CDS Desru_1356 NC_015589.1 1375991 1376587 D PFAM: SNARE associated Golgi protein; KEGG: drm:Dred_2311 hypothetical protein; hypothetical protein 1375991..1376587 Desulfotomaculum ruminis DSM 2154 10737739 YP_004544916.1 CDS Desru_1357 NC_015589.1 1376724 1377659 D PFAM: lipolytic protein G-D-S-L family; KEGG: drm:Dred_2310 GDSL family lipase; G-D-S-L family lipolytic protein 1376724..1377659 Desulfotomaculum ruminis DSM 2154 10737740 YP_004544917.1 CDS Desru_1358 NC_015589.1 1377642 1377878 R KEGG: dae:Dtox_3323 hypothetical protein; hypothetical protein complement(1377642..1377878) Desulfotomaculum ruminis DSM 2154 10737741 YP_004544918.1 CDS Desru_1359 NC_015589.1 1378189 1379712 D TIGRFAM: anthranilate synthase component I; KEGG: drm:Dred_0248 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; anthranilate synthase component I 1378189..1379712 Desulfotomaculum ruminis DSM 2154 10737742 YP_004544919.1 CDS Desru_1360 NC_015589.1 1379696 1380268 D KEGG: drm:Dred_0249 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 1379696..1380268 Desulfotomaculum ruminis DSM 2154 10737743 YP_004544920.1 CDS Desru_1361 NC_015589.1 1380295 1381332 D KEGG: drm:Dred_0250 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 1380295..1381332 Desulfotomaculum ruminis DSM 2154 10737744 YP_004544921.1 CDS Desru_1362 NC_015589.1 1381329 1382126 D KEGG: drm:Dred_0251 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 1381329..1382126 Desulfotomaculum ruminis DSM 2154 10737745 YP_004544922.1 CDS Desru_1363 NC_015589.1 1382116 1382751 D KEGG: drm:Dred_0252 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 1382116..1382751 Desulfotomaculum ruminis DSM 2154 10737746 YP_004544923.1 CDS Desru_1364 NC_015589.1 1382738 1383928 D KEGG: drm:Dred_0253 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta 1382738..1383928 Desulfotomaculum ruminis DSM 2154 10737747 YP_004544924.1 CDS Desru_1365 NC_015589.1 1383925 1384728 D TIGRFAM: tryptophan synthase, alpha subunit; KEGG: drm:Dred_0254 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 1383925..1384728 Desulfotomaculum ruminis DSM 2154 10737748 YP_004544925.1 CDS Desru_1366 NC_015589.1 1384954 1385697 D KEGG: drm:Dred_2309 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; PFAM: sigma-70 region 2 domain protein; RNA polymerase sigma-I factor 1384954..1385697 Desulfotomaculum ruminis DSM 2154 10737749 YP_004544926.1 CDS Desru_1367 NC_015589.1 1385690 1386892 D KEGG: drm:Dred_2308 hypothetical protein; hypothetical protein 1385690..1386892 Desulfotomaculum ruminis DSM 2154 10737750 YP_004544927.1 CDS Desru_1368 NC_015589.1 1387033 1388001 R KEGG: drm:Dred_2307 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; magnesium and cobalt transport protein CorA complement(1387033..1388001) Desulfotomaculum ruminis DSM 2154 10737751 YP_004544928.1 CDS Desru_1369 NC_015589.1 1388531 1389232 R KEGG: drm:Dred_2306 hypothetical protein; hypothetical protein complement(1388531..1389232) Desulfotomaculum ruminis DSM 2154 10737752 YP_004544929.1 CDS Desru_1370 NC_015589.1 1389449 1391167 D PFAM: Fe-S cluster domain protein; KEGG: drm:Dred_2305 ferredoxin 2; Fe-S cluster domain-containing protein 1389449..1391167 Desulfotomaculum ruminis DSM 2154 10737753 YP_004544930.1 CDS Desru_1371 NC_015589.1 1391491 1391847 D manually curated; PFAM: regulatory protein ArsR; KEGG: gwc:GWCH70_3194 transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; regulatory protein ArsR 1391491..1391847 Desulfotomaculum ruminis DSM 2154 10737754 YP_004544931.1 CDS Desru_1372 NC_015589.1 1391844 1392104 D KEGG: sti:Sthe_2171 hypothetical protein; hypothetical protein 1391844..1392104 Desulfotomaculum ruminis DSM 2154 10737755 YP_004544932.1 CDS Desru_1373 NC_015589.1 1392165 1392773 D KEGG: cyc:PCC7424_1483 hypothetical protein; hypothetical protein 1392165..1392773 Desulfotomaculum ruminis DSM 2154 10737756 YP_004544933.1 CDS Desru_1375 NC_015589.1 1393094 1393411 D manually curated; KEGG: dae:Dtox_2782 plasmid stabilization system; plasmid stabilization system 1393094..1393411 Desulfotomaculum ruminis DSM 2154 10737758 YP_004544934.1 CDS Desru_1376 NC_015589.1 1394038 1394634 D KEGG: drm:Dred_2286 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 family RNA polymerase sigma factor 1394038..1394634 Desulfotomaculum ruminis DSM 2154 10737760 YP_004544935.1 CDS Desru_1377 NC_015589.1 1394649 1395713 D PFAM: Protein of unknown function DUF2275, transmembrane; KEGG: drm:Dred_0040 putative transmembrane anti-sigma factor; hypothetical protein 1394649..1395713 Desulfotomaculum ruminis DSM 2154 10737761 YP_004544936.1 CDS Desru_1378 NC_015589.1 1395907 1396131 D PFAM: nitrogen-fixing NifU domain protein; KEGG: drm:Dred_2284 NifU domain-containing protein; nitrogen-fixing NifU domain-containing protein 1395907..1396131 Desulfotomaculum ruminis DSM 2154 10737762 YP_004544937.1 CDS Desru_1379 NC_015589.1 1396325 1396459 D PFAM: nitrogen-fixing NifU domain protein; KEGG: pth:PTH_2132 hypothetical protein; nitrogen-fixing NifU domain-containing protein 1396325..1396459 Desulfotomaculum ruminis DSM 2154 10737763 YP_004544938.1 CDS Desru_1380 NC_015589.1 1396593 1397492 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: drm:Dred_2282 LysR family transcriptional regulator; LysR substrate-binding protein complement(1396593..1397492) Desulfotomaculum ruminis DSM 2154 10737764 YP_004544939.1 CDS Desru_1381 NC_015589.1 1397738 1398553 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: drm:Dred_2280 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1397738..1398553) Desulfotomaculum ruminis DSM 2154 10737765 YP_004544940.1 CDS Desru_1382 NC_015589.1 1399041 1400207 D PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2277 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1399041..1400207 Desulfotomaculum ruminis DSM 2154 10737766 YP_004544941.1 CDS Desru_1383 NC_015589.1 1400469 1401635 D PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2276 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1400469..1401635 Desulfotomaculum ruminis DSM 2154 10737767 YP_004544942.1 CDS Desru_1384 NC_015589.1 1401648 1403327 D KEGG: drm:Dred_2275 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; ATP-binding protein 1401648..1403327 Desulfotomaculum ruminis DSM 2154 10737768 YP_004544943.1 CDS Desru_1385 NC_015589.1 1403324 1404865 D KEGG: drm:Dred_2274 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; sigma-54 factor interaction domain-containing protein 1403324..1404865 Desulfotomaculum ruminis DSM 2154 10737769 YP_004544944.1 CDS Desru_1386 NC_015589.1 1404885 1405169 R PFAM: thiamineS protein; KEGG: drm:Dred_2272 hypothetical protein; sulfur transfer protein ThiS complement(1404885..1405169) Desulfotomaculum ruminis DSM 2154 10737770 YP_004544945.1 CDS Desru_1387 NC_015589.1 1405486 1407216 D PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: adg:Adeg_1006 aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 1405486..1407216 Desulfotomaculum ruminis DSM 2154 10737771 YP_004544946.1 CDS Desru_1388 NC_015589.1 1407265 1407501 D PFAM: thiamineS protein; KEGG: drm:Dred_2271 thiamineS protein; sulfur transfer protein ThiS 1407265..1407501 Desulfotomaculum ruminis DSM 2154 10737772 YP_004544947.1 CDS Desru_1389 NC_015589.1 1407592 1408290 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2270 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1407592..1408290 Desulfotomaculum ruminis DSM 2154 10737773 YP_004544948.1 CDS Desru_1390 NC_015589.1 1408292 1409047 D KEGG: drm:Dred_2269 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1408292..1409047 Desulfotomaculum ruminis DSM 2154 10737774 YP_004544949.1 CDS Desru_1391 NC_015589.1 1409051 1410028 D TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: drm:Dred_2268 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 1409051..1410028 Desulfotomaculum ruminis DSM 2154 10737775 YP_004544950.1 CDS Desru_1392 NC_015589.1 1410033 1410530 D KEGG: drm:Dred_2267 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein C 1410033..1410530 Desulfotomaculum ruminis DSM 2154 10737776 YP_004544951.1 CDS Desru_1393 NC_015589.1 1410515 1410952 D PFAM: MOSC domain containing protein; KEGG: drm:Dred_2266 MOSC domain-containing protein; MOSC domain-containing protein 1410515..1410952 Desulfotomaculum ruminis DSM 2154 10737777 YP_004544952.1 CDS Desru_1394 NC_015589.1 1410933 1412219 D KEGG: drm:Dred_2264 UBA/ThiF-type NAD/FAD binding protein; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; molybdopterin-guanine dinucleotide biosynthesis protein MobB 1410933..1412219 Desulfotomaculum ruminis DSM 2154 10737778 YP_004544953.1 CDS Desru_1395 NC_015589.1 1412597 1413784 R PFAM: major facilitator superfamily MFS_1; KEGG: mpd:MCP_2343 MFS transporter; major facilitator superfamily protein complement(1412597..1413784) Desulfotomaculum ruminis DSM 2154 10737779 YP_004544954.1 CDS Desru_1396 NC_015589.1 1413777 1414742 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mta:Moth_1107 hypothetical protein; hypothetical protein complement(1413777..1414742) Desulfotomaculum ruminis DSM 2154 10737780 YP_004544955.1 CDS Desru_1397 NC_015589.1 1414826 1415377 R KEGG: drm:Dred_2262 hypothetical protein; hypothetical protein complement(1414826..1415377) Desulfotomaculum ruminis DSM 2154 10737781 YP_004544956.1 CDS Desru_1398 NC_015589.1 1415607 1417121 D KEGG: mbu:Mbur_0523 catalase; PFAM: Catalase related subgroup; Catalase domain protein; catalase 1415607..1417121 Desulfotomaculum ruminis DSM 2154 10737782 YP_004544957.1 CDS Desru_1399 NC_015589.1 1417374 1418759 D KEGG: drm:Dred_2261 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; TrmA family RNA methyltransferase 1417374..1418759 Desulfotomaculum ruminis DSM 2154 10737783 YP_004544958.1 CDS Desru_1400 NC_015589.1 1419025 1419894 D PFAM: alpha/beta hydrolase fold; KEGG: sat:SYN_02434 hydrolase or acyltransferase; alpha/beta hydrolase fold protein 1419025..1419894 Desulfotomaculum ruminis DSM 2154 10737784 YP_004544959.1 CDS Desru_1401 NC_015589.1 1420813 1420968 R KEGG: dhd:Dhaf_2182 hypothetical protein; hypothetical protein complement(1420813..1420968) Desulfotomaculum ruminis DSM 2154 10737785 YP_004544960.1 CDS Desru_1402 NC_015589.1 1423794 1424899 D KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein join(1423794..1424048,1424048..1424899) Desulfotomaculum ruminis DSM 2154 10737786 YP_004544961.1 CDS Desru_1403 NC_015589.1 1427181 1429622 D TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; PFAM: helicase domain protein; KEGG: amt:Amet_1662 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase; CRISPR-associated HD domain-containing protein 1427181..1429622 Desulfotomaculum ruminis DSM 2154 10737787 YP_004544962.1 CDS Desru_1404 NC_015589.1 1429641 1430384 D KEGG: mla:Mlab_0849 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5; CRISPR-associated protein Cas5 family 1429641..1430384 Desulfotomaculum ruminis DSM 2154 10737788 YP_004544963.1 CDS Desru_1405 NC_015589.1 1430381 1432510 D KEGG: dae:Dtox_3649 CRISPR-associated protein, Csd1 family; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; CRISPR-associated protein Csd1 family 1430381..1432510 Desulfotomaculum ruminis DSM 2154 10737789 YP_004544964.1 CDS Desru_1406 NC_015589.1 1432513 1433367 D KEGG: bha:BH0339 hypothetical protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; CRISPR-associated protein Csd2 family 1432513..1433367 Desulfotomaculum ruminis DSM 2154 10737790 YP_004544965.1 CDS Desru_1407 NC_015589.1 1433387 1434058 D TIGRFAM: CRISPR-associated protein Cas4; KEGG: dhd:Dhaf_2187 CRISPR-associated protein Cas4; CRISPR-associated protein Cas4 1433387..1434058 Desulfotomaculum ruminis DSM 2154 10737791 YP_004544966.1 CDS Desru_1408 NC_015589.1 1434055 1435086 D KEGG: dhd:Dhaf_2188 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 1434055..1435086 Desulfotomaculum ruminis DSM 2154 10737792 YP_004544967.1 CDS Desru_1409 NC_015589.1 1435103 1435387 D TIGRFAM: CRISPR-associated protein Cas2; KEGG: dhd:Dhaf_2189 CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 1435103..1435387 Desulfotomaculum ruminis DSM 2154 10737793 YP_004544968.1 CDS Desru_1410 NC_015589.1 1439794 1440141 D KEGG: ure:UREG_04343 similar to acyl-CoA dehydrogenase; hypothetical protein 1439794..1440141 Desulfotomaculum ruminis DSM 2154 10737794 YP_004544969.1 CDS Desru_1411 NC_015589.1 1440494 1441599 D KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein join(1440494..1440748,1440748..1441599) Desulfotomaculum ruminis DSM 2154 10737795 YP_004544970.1 CDS Desru_1412 NC_015589.1 1441812 1442051 D KEGG: dsy:DSY3700 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; AbrB family transcriptional regulator 1441812..1442051 Desulfotomaculum ruminis DSM 2154 10737796 YP_004544971.1 CDS Desru_1413 NC_015589.1 1442048 1443121 D KEGG: dhd:Dhaf_1656 hypothetical protein; hypothetical protein 1442048..1443121 Desulfotomaculum ruminis DSM 2154 10737797 YP_004544972.1 CDS Desru_1414 NC_015589.1 1443449 1443868 D PFAM: UspA domain-containing protein; KEGG: dsy:DSY4453 hypothetical protein; UspA domain-containing protein 1443449..1443868 Desulfotomaculum ruminis DSM 2154 10737798 YP_004544973.1 CDS Desru_1415 NC_015589.1 1443968 1444843 D KEGG: pth:PTH_0284 transposase and inactivated derivatives; transposase-like protein 1443968..1444843 Desulfotomaculum ruminis DSM 2154 10737799 YP_004544974.1 CDS Desru_1416 NC_015589.1 1445029 1445784 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lbf:LBF_0126 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1445029..1445784) Desulfotomaculum ruminis DSM 2154 10737800 YP_004544975.1 CDS Desru_1417 NC_015589.1 1445995 1446888 D KEGG: lbf:LBF_0127 transcription regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC-type transcriptional regulator domain-containing protein 1445995..1446888 Desulfotomaculum ruminis DSM 2154 10737801 YP_004544976.1 CDS Desru_1419 NC_015589.1 1447317 1447589 D KEGG: pth:PTH_0284 transposase and inactivated derivatives; hypothetical protein 1447317..1447589 Desulfotomaculum ruminis DSM 2154 10737803 YP_004544977.1 CDS Desru_1420 NC_015589.1 1448224 1449447 D TIGRFAM: tyrosyl-tRNA synthetase; KEGG: ere:EUBREC_0190 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 1448224..1449447 Desulfotomaculum ruminis DSM 2154 10737804 YP_004544978.1 CDS Desru_1421 NC_015589.1 1449591 1450106 D KEGG: pak:HMPREF0675_4878 hypothetical protein; hypothetical protein 1449591..1450106 Desulfotomaculum ruminis DSM 2154 10737805 YP_004544979.1 CDS Desru_1424 NC_015589.1 1452014 1453021 R PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: cbl:CLK_1713 choloylglycine hydrolase family protein; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase complement(1452014..1453021) Desulfotomaculum ruminis DSM 2154 10737808 YP_004544980.1 CDS Desru_1425 NC_015589.1 1453561 1454175 D PFAM: Methyltransferase type 12; KEGG: dae:Dtox_1469 methyltransferase type 12; type 12 methyltransferase 1453561..1454175 Desulfotomaculum ruminis DSM 2154 10737809 YP_004544981.1 CDS Desru_1427 NC_015589.1 1454761 1455537 D PFAM: Methyltransferase type 11; KEGG: syp:SYNPCC7002_A0523 SAM-dependent methyltransferase; type 11 methyltransferase 1454761..1455537 Desulfotomaculum ruminis DSM 2154 10737811 YP_004544982.1 CDS Desru_1428 NC_015589.1 1455633 1456319 D KEGG: amt:Amet_1915 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 1455633..1456319 Desulfotomaculum ruminis DSM 2154 10737812 YP_004544983.1 CDS Desru_1429 NC_015589.1 1456316 1458052 D KEGG: amt:Amet_1916 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 1456316..1458052 Desulfotomaculum ruminis DSM 2154 10737813 YP_004544984.1 CDS Desru_1430 NC_015589.1 1458260 1458865 D PFAM: lipolytic protein G-D-S-L family; KEGG: amt:Amet_1979 GDSL family lipase; G-D-S-L family lipolytic protein 1458260..1458865 Desulfotomaculum ruminis DSM 2154 10737814 YP_004544985.1 CDS Desru_1431 NC_015589.1 1458877 1460283 D PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: amt:Amet_1980 membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein 1458877..1460283 Desulfotomaculum ruminis DSM 2154 10737815 YP_004544986.1 CDS Desru_1432 NC_015589.1 1460298 1460579 D KEGG: cbe:Cbei_2782 hypothetical protein; hypothetical protein 1460298..1460579 Desulfotomaculum ruminis DSM 2154 10737816 YP_004544987.1 CDS Desru_1433 NC_015589.1 1461111 1461866 D KEGG: cpy:Cphy_1008 MerR family transcriptional regulator; PFAM: TipAS antibiotic-recognition domain-containing protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; TipAS antibiotic-recognition domain-containing protein 1461111..1461866 Desulfotomaculum ruminis DSM 2154 10737817 YP_004544988.1 CDS Desru_1434 NC_015589.1 1462157 1463262 R KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(join(1462157..1463008,1463008..1463262)) Desulfotomaculum ruminis DSM 2154 10737818 YP_004544989.1 CDS Desru_1435 NC_015589.1 1463833 1464438 D PFAM: protein of unknown function UPF0157; KEGG: gtn:GTNG_0311 hypothetical protein; hypothetical protein 1463833..1464438 Desulfotomaculum ruminis DSM 2154 10737819 YP_004544990.1 CDS Desru_1437 NC_015589.1 1464765 1465382 R KEGG: lpc:LPC_2744 hypothetical protein; hypothetical protein complement(1464765..1465382) Desulfotomaculum ruminis DSM 2154 10737821 YP_004544991.1 CDS Desru_1438 NC_015589.1 1465410 1465826 R PFAM: protein of unknown function UPF0047; KEGG: dae:Dtox_0608 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; hypothetical protein complement(1465410..1465826) Desulfotomaculum ruminis DSM 2154 10737822 YP_004544992.1 CDS Desru_1439 NC_015589.1 1466267 1466824 D manually curated; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; KEGG: tjr:TherJR_1682 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; cupin 1466267..1466824 Desulfotomaculum ruminis DSM 2154 10737823 YP_004544993.1 CDS Desru_1440 NC_015589.1 1466839 1468521 D PFAM: AMP-dependent synthetase and ligase; KEGG: tjr:TherJR_1681 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1466839..1468521 Desulfotomaculum ruminis DSM 2154 10737824 YP_004544994.1 CDS Desru_1441 NC_015589.1 1468774 1470801 D PFAM: acyltransferase 3; KEGG: dhd:Dhaf_2192 acyltransferase 3; acyltransferase 3 1468774..1470801 Desulfotomaculum ruminis DSM 2154 10737825 YP_004544995.1 CDS Desru_1442 NC_015589.1 1470806 1471519 D KEGG: dhd:Dhaf_2193 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 1470806..1471519 Desulfotomaculum ruminis DSM 2154 10737826 YP_004544996.1 CDS Desru_1443 NC_015589.1 1471516 1472910 D KEGG: dhd:Dhaf_2194 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 1471516..1472910 Desulfotomaculum ruminis DSM 2154 10737827 YP_004544997.1 CDS Desru_1444 NC_015589.1 1472903 1474378 D KEGG: dhd:Dhaf_2195 hypothetical protein; hypothetical protein 1472903..1474378 Desulfotomaculum ruminis DSM 2154 10737828 YP_004544998.1 CDS Desru_1446 NC_015589.1 1475352 1475732 D PFAM: transcriptional regulator PadR family protein; KEGG: afl:Aflv_0293 predicted transcriptional regulator, PadR family; PadR family transcriptional regulator 1475352..1475732 Desulfotomaculum ruminis DSM 2154 10737830 YP_004544999.1 CDS Desru_1447 NC_015589.1 1475722 1476318 D KEGG: dhd:Dhaf_2173 hypothetical protein; hypothetical protein 1475722..1476318 Desulfotomaculum ruminis DSM 2154 10737831 YP_004545000.1 CDS Desru_1448 NC_015589.1 1476322 1477014 D KEGG: cpy:Cphy_1796 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 1476322..1477014 Desulfotomaculum ruminis DSM 2154 10737832 YP_004545001.1 CDS Desru_1449 NC_015589.1 1477341 1478060 D KEGG: amt:Amet_1438 hypothetical protein; hypothetical protein 1477341..1478060 Desulfotomaculum ruminis DSM 2154 10737833 YP_004545002.1 CDS Desru_1450 NC_015589.1 1478207 1478899 D PFAM: Methyltransferase type 11; KEGG: hau:Haur_0170 methyltransferase type 11; type 11 methyltransferase 1478207..1478899 Desulfotomaculum ruminis DSM 2154 10737834 YP_004545003.1 CDS Desru_1451 NC_015589.1 1479100 1480755 D KEGG: ana:alr3490 hypothetical protein; hypothetical protein 1479100..1480755 Desulfotomaculum ruminis DSM 2154 10737835 YP_004545004.1 CDS Desru_1452 NC_015589.1 1481144 1481764 D PFAM: regulatory protein TetR; KEGG: slp:Slip_2342 transcriptional regulator, TetR family; regulatory protein TetR 1481144..1481764 Desulfotomaculum ruminis DSM 2154 10737836 YP_004545005.1 CDS Desru_1453 NC_015589.1 1481742 1482848 D PFAM: secretion protein HlyD family protein; KEGG: slp:Slip_2341 secretion protein HlyD family protein; secretion protein HlyD family protein 1481742..1482848 Desulfotomaculum ruminis DSM 2154 10737837 YP_004545006.1 CDS Desru_1454 NC_015589.1 1482862 1484427 D KEGG: slp:Slip_2340 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 1482862..1484427 Desulfotomaculum ruminis DSM 2154 10737838 YP_004545007.1 CDS Desru_1455 NC_015589.1 1484474 1484890 D PFAM: UspA domain-containing protein; KEGG: bay:RBAM_036340 YxiE; UspA domain-containing protein 1484474..1484890 Desulfotomaculum ruminis DSM 2154 10737839 YP_004545008.1 CDS Desru_1456 NC_015589.1 1485091 1485678 D PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein 1485091..1485678 Desulfotomaculum ruminis DSM 2154 10737840 YP_004545009.1 CDS Desru_1457 NC_015589.1 1485928 1486302 D KEGG: aoe:Clos_2735 hypothetical protein; hypothetical protein 1485928..1486302 Desulfotomaculum ruminis DSM 2154 10737841 YP_004545010.1 CDS Desru_1458 NC_015589.1 1486488 1486802 D KEGG: bja:bll5958 hypothetical protein; hypothetical protein 1486488..1486802 Desulfotomaculum ruminis DSM 2154 10737842 YP_004545011.1 CDS Desru_1459 NC_015589.1 1486865 1487593 D KEGG: gym:GYMC10_2680 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Serine/threonine-protein kinase-like domain-containing protein 1486865..1487593 Desulfotomaculum ruminis DSM 2154 10737843 YP_004545012.1 CDS Desru_1460 NC_015589.1 1488011 1489027 D KEGG: dtu:Dtur_1708 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator 1488011..1489027 Desulfotomaculum ruminis DSM 2154 10737844 YP_004545013.1 CDS Desru_1461 NC_015589.1 1489050 1489448 D PFAM: RbsD or FucU transport; KEGG: gka:GK3229 D-ribose pyranase; transport protein RbsD/FucU 1489050..1489448 Desulfotomaculum ruminis DSM 2154 10737845 YP_004545014.1 CDS Desru_1462 NC_015589.1 1489476 1490972 D KEGG: dtu:Dtur_1644 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1489476..1490972 Desulfotomaculum ruminis DSM 2154 10737846 YP_004545015.1 CDS Desru_1463 NC_015589.1 1490975 1491964 D PFAM: inner-membrane translocator; KEGG: pin:Ping_0342 ribose ABC transporter permease protein; inner-membrane translocator 1490975..1491964 Desulfotomaculum ruminis DSM 2154 10737847 YP_004545016.1 CDS Desru_1464 NC_015589.1 1491977 1492936 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tpd:Teth39_2038 monosaccharide-transporting ATPase; periplasmic binding protein/LacI transcriptional regulator 1491977..1492936 Desulfotomaculum ruminis DSM 2154 10737848 YP_004545017.1 CDS Desru_1465 NC_015589.1 1492956 1493885 D KEGG: pdi:BDI_1657 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein; ribokinase 1492956..1493885 Desulfotomaculum ruminis DSM 2154 10737849 YP_004545018.1 CDS Desru_1466 NC_015589.1 1493890 1494576 D TIGRFAM: deoxyribose-phosphate aldolase; KEGG: tjr:TherJR_2670 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 1493890..1494576 Desulfotomaculum ruminis DSM 2154 10737850 YP_004545019.1 CDS Desru_1467 NC_015589.1 1494792 1495526 R KEGG: hmo:HM1_1647 hypothetical protein; hypothetical protein complement(1494792..1495526) Desulfotomaculum ruminis DSM 2154 10737851 YP_004545020.1 CDS Desru_1468 NC_015589.1 1495519 1496436 R KEGG: hmo:HM1_1646 bacitracin abc transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1495519..1496436) Desulfotomaculum ruminis DSM 2154 10737852 YP_004545021.1 CDS Desru_1469 NC_015589.1 1496610 1497296 D KEGG: cbt:CLH_2461 regulatory protein VanR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 1496610..1497296 Desulfotomaculum ruminis DSM 2154 10737853 YP_004545022.1 CDS Desru_1470 NC_015589.1 1497293 1498432 D KEGG: bwe:BcerKBAB4_2314 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein 1497293..1498432 Desulfotomaculum ruminis DSM 2154 10737854 YP_004545023.1 CDS Desru_1471 NC_015589.1 1498606 1500558 R KEGG: mpi:Mpet_1171 hypothetical protein; hypothetical protein complement(1498606..1500558) Desulfotomaculum ruminis DSM 2154 10737855 YP_004545024.1 CDS Desru_1472 NC_015589.1 1500808 1502616 R PFAM: Spore coat protein CotH; KEGG: cce:Ccel_0251 spore coat protein CotH; spore coat protein CotH complement(1500808..1502616) Desulfotomaculum ruminis DSM 2154 10737856 YP_004545025.1 CDS Desru_1473 NC_015589.1 1502633 1503310 R KEGG: dhd:Dhaf_2306 hypothetical protein; hypothetical protein complement(1502633..1503310) Desulfotomaculum ruminis DSM 2154 10737857 YP_004545026.1 CDS Desru_1474 NC_015589.1 1503303 1504028 R PFAM: VTC domain; KEGG: dhd:Dhaf_2305 hypothetical protein; VTC domain-containing protein complement(1503303..1504028) Desulfotomaculum ruminis DSM 2154 10737858 YP_004545027.1 CDS Desru_1475 NC_015589.1 1504306 1504983 D KEGG: shi:Shel_13160 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 1504306..1504983 Desulfotomaculum ruminis DSM 2154 10737859 YP_004545028.1 CDS Desru_1476 NC_015589.1 1504980 1506212 D KEGG: ele:Elen_0372 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein 1504980..1506212 Desulfotomaculum ruminis DSM 2154 10737860 YP_004545029.1 CDS Desru_1477 NC_015589.1 1506469 1507029 R PFAM: integrase family protein; KEGG: dhd:Dhaf_0174 integrase family protein; integrase family protein complement(1506469..1507029) Desulfotomaculum ruminis DSM 2154 10737861 YP_004545030.1 CDS Desru_1478 NC_015589.1 1507410 1508216 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dhd:Dhaf_0175 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1507410..1508216 Desulfotomaculum ruminis DSM 2154 10737862 YP_004545031.1 CDS Desru_1479 NC_015589.1 1508286 1508723 R KEGG: esi:Exig_2989 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(1508286..1508723) Desulfotomaculum ruminis DSM 2154 10737863 YP_004545032.1 CDS Desru_1480 NC_015589.1 1508909 1509364 D KEGG: esi:Exig_2988 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 1508909..1509364 Desulfotomaculum ruminis DSM 2154 10737864 YP_004545033.1 CDS Desru_1481 NC_015589.1 1509396 1509740 D PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_6008 major facilitator superfamily MFS_1; major facilitator superfamily protein 1509396..1509740 Desulfotomaculum ruminis DSM 2154 10737865 YP_004545034.1 CDS Desru_1482 NC_015589.1 1509860 1511011 D PFAM: aldo/keto reductase; KEGG: cbe:Cbei_0558 aldo/keto reductase; aldo/keto reductase 1509860..1511011 Desulfotomaculum ruminis DSM 2154 10737866 YP_004545035.1 CDS Desru_1483 NC_015589.1 1511134 1512342 D PFAM: protein of unknown function DUF111; KEGG: ccb:Clocel_4273 hypothetical protein; hypothetical protein 1511134..1512342 Desulfotomaculum ruminis DSM 2154 10737867 YP_004545036.1 CDS Desru_1484 NC_015589.1 1512412 1513725 D KEGG: amt:Amet_4636 glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; glutamate--cysteine ligase 1512412..1513725 Desulfotomaculum ruminis DSM 2154 10737868 YP_004545037.1 CDS Desru_1485 NC_015589.1 1513719 1515053 D KEGG: amt:Amet_4635 hypothetical protein; hypothetical protein 1513719..1515053 Desulfotomaculum ruminis DSM 2154 10737869 YP_004545038.1 CDS Desru_1486 NC_015589.1 1515088 1515834 D PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cbe:Cbei_0561 NCAIR mutase (PurE)-related protein; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 1515088..1515834 Desulfotomaculum ruminis DSM 2154 10737870 YP_004545039.1 CDS Desru_1487 NC_015589.1 1515866 1516504 D KEGG: cno:NT01CX_1623 hypothetical protein; hypothetical protein 1515866..1516504 Desulfotomaculum ruminis DSM 2154 10737871 YP_004545040.1 CDS Desru_1488 NC_015589.1 1516737 1517675 D KEGG: fjo:Fjoh_2015 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; N-acetyltransferase GCN5 1516737..1517675 Desulfotomaculum ruminis DSM 2154 10737872 YP_004545041.1 CDS Desru_1489 NC_015589.1 1518218 1519201 D TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: cpy:Cphy_3480 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 1518218..1519201 Desulfotomaculum ruminis DSM 2154 10737873 YP_004545042.1 CDS Desru_1490 NC_015589.1 1519439 1519906 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: aco:Amico_0912 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1519439..1519906 Desulfotomaculum ruminis DSM 2154 10737874 YP_004545043.1 CDS Desru_1491 NC_015589.1 1519915 1520142 R TIGRFAM: small, acid-soluble spore protein tlp; KEGG: cbi:CLJ_B1081 small acid-soluble spore protein Tlp; small acid-soluble spore protein tlp complement(1519915..1520142) Desulfotomaculum ruminis DSM 2154 10737875 YP_004545044.1 CDS Desru_1492 NC_015589.1 1520292 1520654 D KEGG: bbe:BBR47_15170 hypothetical protein; hypothetical protein 1520292..1520654 Desulfotomaculum ruminis DSM 2154 10737876 YP_004545045.1 CDS Desru_1493 NC_015589.1 1520712 1521563 D PFAM: Pirin domain protein; KEGG: emi:Emin_0339 pirin domain-containing protein; Pirin domain-containing protein 1520712..1521563 Desulfotomaculum ruminis DSM 2154 10737877 YP_004545046.1 CDS Desru_1495 NC_015589.1 1523203 1525134 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nth:Nther_0968 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1523203..1525134 Desulfotomaculum ruminis DSM 2154 10737879 YP_004545047.1 CDS Desru_1496 NC_015589.1 1525219 1525794 R PFAM: NADPH-dependent FMN reductase; KEGG: mta:Moth_1770 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(1525219..1525794) Desulfotomaculum ruminis DSM 2154 10737880 YP_004545048.1 CDS Desru_1497 NC_015589.1 1525962 1526339 D PFAM: helix-turn-helix HxlR type; KEGG: cbe:Cbei_0347 HxlR family transcriptional regulator; helix-turn-helix HxlR type 1525962..1526339 Desulfotomaculum ruminis DSM 2154 10737881 YP_004545049.1 CDS Desru_1498 NC_015589.1 1526336 1527529 D PFAM: peptidase M24; creatinase; KEGG: drm:Dred_2216 peptidase M24; peptidase M24 1526336..1527529 Desulfotomaculum ruminis DSM 2154 10737882 YP_004545050.1 CDS Desru_1499 NC_015589.1 1527697 1527813 D PFAM: regulatory protein MerR; KEGG: afl:Aflv_0173 transcriptional regulator (MerR family); regulatory protein MerR 1527697..1527813 Desulfotomaculum ruminis DSM 2154 10737883 YP_004545051.1 CDS Desru_1500 NC_015589.1 1528040 1529008 D KEGG: cbf:CLI_0804 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1528040..1529008 Desulfotomaculum ruminis DSM 2154 10737884 YP_004545052.1 CDS Desru_1501 NC_015589.1 1529645 1530079 D KEGG: drm:Dred_0747 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 1529645..1530079 Desulfotomaculum ruminis DSM 2154 10737885 YP_004545053.1 CDS Desru_1502 NC_015589.1 1530127 1530423 D SMART: TRASH domain-containing protein; KEGG: drm:Dred_0746 hypothetical protein; TRASH domain-containing protein 1530127..1530423 Desulfotomaculum ruminis DSM 2154 10737886 YP_004545054.1 CDS Desru_1503 NC_015589.1 1530505 1530696 D PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: drm:Dred_1508 sec-independent translocation protein MttA/Hcf106; sec-independent translocation protein mttA/Hcf106 1530505..1530696 Desulfotomaculum ruminis DSM 2154 10737887 YP_004545055.1 CDS Desru_1504 NC_015589.1 1530827 1531507 R KEGG: dae:Dtox_0955 hypothetical protein; hypothetical protein complement(1530827..1531507) Desulfotomaculum ruminis DSM 2154 10737888 YP_004545056.1 CDS Desru_1505 NC_015589.1 1531891 1532996 D KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein join(1531891..1532142,1532142..1532996) Desulfotomaculum ruminis DSM 2154 10737889 YP_004545057.1 CDS Desru_1506 NC_015589.1 1533162 1533857 D KEGG: cth:Cthe_1408 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 1533162..1533857 Desulfotomaculum ruminis DSM 2154 10737890 YP_004545058.1 CDS Desru_1507 NC_015589.1 1533862 1535325 D KEGG: cth:Cthe_1409 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein 1533862..1535325 Desulfotomaculum ruminis DSM 2154 10737891 YP_004545059.1 CDS Desru_1508 NC_015589.1 1535508 1536005 D KEGG: drm:Dred_0322 Fis family transcriptional regulator; hypothetical protein 1535508..1536005 Desulfotomaculum ruminis DSM 2154 10737892 YP_004545060.1 CDS Desru_1509 NC_015589.1 1536245 1536928 D KEGG: drm:Dred_0323 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 1536245..1536928 Desulfotomaculum ruminis DSM 2154 10737893 YP_004545061.1 CDS Desru_1510 NC_015589.1 1536925 1538376 D KEGG: drm:Dred_0324 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 1536925..1538376 Desulfotomaculum ruminis DSM 2154 10737894 YP_004545062.1 CDS Desru_1511 NC_015589.1 1538575 1539150 D KEGG: cpy:Cphy_3870 hypothetical protein; hypothetical protein 1538575..1539150 Desulfotomaculum ruminis DSM 2154 10737895 YP_004545063.1 CDS Desru_1512 NC_015589.1 1539152 1539841 D KEGG: drm:Dred_0318 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1539152..1539841 Desulfotomaculum ruminis DSM 2154 10737896 YP_004545064.1 CDS Desru_1513 NC_015589.1 1539828 1541015 D KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1539828..1541015 Desulfotomaculum ruminis DSM 2154 10737897 YP_004545065.1 CDS Desru_1514 NC_015589.1 1541021 1542208 D PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein; hypothetical protein 1541021..1542208 Desulfotomaculum ruminis DSM 2154 10737898 YP_004545066.1 CDS Desru_1515 NC_015589.1 1542556 1544400 D PFAM: ferredoxin; KEGG: mta:Moth_2112 ferredoxin; ferredoxin 1542556..1544400 Desulfotomaculum ruminis DSM 2154 10737899 YP_004545067.1 CDS Desru_1516 NC_015589.1 1544397 1545299 D KEGG: mta:Moth_2111 uroporphyrinogen-III decarboxylase-like; uroporphyrinogen-III decarboxylase-like protein 1544397..1545299 Desulfotomaculum ruminis DSM 2154 10737900 YP_004545068.1 CDS Desru_1517 NC_015589.1 1545449 1546111 D PFAM: cobalamin B12-binding domain protein; KEGG: dhd:Dhaf_0195 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 1545449..1546111 Desulfotomaculum ruminis DSM 2154 10737901 YP_004545069.1 CDS Desru_1518 NC_015589.1 1546108 1547142 D PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: dhd:Dhaf_0196 uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1546108..1547142 Desulfotomaculum ruminis DSM 2154 10737902 YP_004545070.1 CDS Desru_1519 NC_015589.1 1547139 1548473 D KEGG: dhd:Dhaf_0197 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; ATP-binding protein 1547139..1548473 Desulfotomaculum ruminis DSM 2154 10737903 YP_004545071.1 CDS Desru_1520 NC_015589.1 1548442 1549833 D KEGG: dhd:Dhaf_0198 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; sigma-54 factor interaction domain-containing protein 1548442..1549833 Desulfotomaculum ruminis DSM 2154 10737904 YP_004545072.1 CDS Desru_1521 NC_015589.1 1549866 1550651 R manually curated; KEGG: dhd:Dhaf_0199 hypothetical protein; hypothetical protein complement(1549866..1550651) Desulfotomaculum ruminis DSM 2154 10737905 YP_004545073.1 CDS Desru_1522 NC_015589.1 1550718 1551029 D KEGG: dhd:Dhaf_0203 hypothetical protein; hypothetical protein 1550718..1551029 Desulfotomaculum ruminis DSM 2154 10737906 YP_004545074.1 CDS Desru_1523 NC_015589.1 1551114 1551350 D KEGG: dhd:Dhaf_0204 hypothetical protein; hypothetical protein 1551114..1551350 Desulfotomaculum ruminis DSM 2154 10737907 YP_004545075.1 CDS Desru_1524 NC_015589.1 1551337 1551780 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dhd:Dhaf_0205 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1551337..1551780 Desulfotomaculum ruminis DSM 2154 10737908 YP_004545076.1 CDS Desru_1525 NC_015589.1 1551784 1552422 D PFAM: Cytochrome b/b6 domain; KEGG: dhd:Dhaf_0206 cytochrome b/b6 domain protein; cytochrome b/b6 protein 1551784..1552422 Desulfotomaculum ruminis DSM 2154 10737909 YP_004545077.1 CDS Desru_1526 NC_015589.1 1552435 1552821 D PFAM: Cytochrome b/b6 domain; KEGG: dhd:Dhaf_0207 subunit IV of cytochrome bc complex petd; cytochrome b/b6 protein 1552435..1552821 Desulfotomaculum ruminis DSM 2154 10737910 YP_004545078.1 CDS Desru_1527 NC_015589.1 1552858 1553367 D KEGG: dhd:Dhaf_0208 hypothetical protein; hypothetical protein 1552858..1553367 Desulfotomaculum ruminis DSM 2154 10737911 YP_004545079.1 CDS Desru_1528 NC_015589.1 1553433 1555337 D KEGG: dhd:Dhaf_0209 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II; nitrous-oxide reductase 1553433..1555337 Desulfotomaculum ruminis DSM 2154 10737912 YP_004545080.1 CDS Desru_1529 NC_015589.1 1555417 1556037 D KEGG: dhd:Dhaf_0210 hypothetical protein; hypothetical protein 1555417..1556037 Desulfotomaculum ruminis DSM 2154 10737913 YP_004545081.1 CDS Desru_1530 NC_015589.1 1555992 1557464 D KEGG: dhd:Dhaf_0211 periplasmic copper-binding; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; copper-binding protein 1555992..1557464 Desulfotomaculum ruminis DSM 2154 10737914 YP_004545082.1 CDS Desru_1531 NC_015589.1 1557467 1557970 D KEGG: dhd:Dhaf_0212 hypothetical protein; hypothetical protein 1557467..1557970 Desulfotomaculum ruminis DSM 2154 10737915 YP_004545083.1 CDS Desru_1532 NC_015589.1 1557967 1558839 D KEGG: dhd:Dhaf_0213 membrane protein NosY; membrane protein NosY 1557967..1558839 Desulfotomaculum ruminis DSM 2154 10737916 YP_004545084.1 CDS Desru_1533 NC_015589.1 1558850 1559782 D KEGG: dhd:Dhaf_0214 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1558850..1559782 Desulfotomaculum ruminis DSM 2154 10737917 YP_004545085.1 CDS Desru_1534 NC_015589.1 1559870 1560916 D KEGG: swo:Swol_1520 ResB protein required for cytochrome c biosynthesis-like protein; ResB protein required for cytochrome c biosynthesis-like protein 1559870..1560916 Desulfotomaculum ruminis DSM 2154 10737918 YP_004545086.1 CDS Desru_1535 NC_015589.1 1560916 1561719 D KEGG: mta:Moth_2200 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 1560916..1561719 Desulfotomaculum ruminis DSM 2154 10737919 YP_004545087.1 CDS Desru_1536 NC_015589.1 1562236 1562706 D KEGG: adg:Adeg_1254 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1562236..1562706 Desulfotomaculum ruminis DSM 2154 10737920 YP_004545088.1 CDS Desru_1537 NC_015589.1 1562859 1563557 D KEGG: dae:Dtox_2732 hypothetical protein; hypothetical protein 1562859..1563557 Desulfotomaculum ruminis DSM 2154 10737921 YP_004545089.1 CDS Desru_1538 NC_015589.1 1563575 1563862 D KEGG: dae:Dtox_2731 4Fe-4S ferredoxin iron-sulfur binding domain protein; hypothetical protein 1563575..1563862 Desulfotomaculum ruminis DSM 2154 10737922 YP_004545090.1 CDS Desru_1539 NC_015589.1 1563894 1564361 D PFAM: ferric-uptake regulator; KEGG: dae:Dtox_1006 ferric uptake regulator, Fur family; ferric-uptake regulator 1563894..1564361 Desulfotomaculum ruminis DSM 2154 10737923 YP_004545091.1 CDS Desru_1540 NC_015589.1 1564546 1565316 D KEGG: cbh:CLC_1080 hypothetical protein; hypothetical protein 1564546..1565316 Desulfotomaculum ruminis DSM 2154 10737924 YP_004545092.1 CDS Desru_1541 NC_015589.1 1565342 1565707 D KEGG: gtn:GTNG_2957 arsenate reductase-like protein; manually curated; PFAM: arsenate reductase and related; arsenate reductase-like protein 1565342..1565707 Desulfotomaculum ruminis DSM 2154 10737925 YP_004545093.1 CDS Desru_1542 NC_015589.1 1565782 1565967 R KEGG: dae:Dtox_3521 hypothetical protein; hypothetical protein complement(1565782..1565967) Desulfotomaculum ruminis DSM 2154 10737926 YP_004545094.1 CDS Desru_1543 NC_015589.1 1566164 1566697 D PFAM: Rubrerythrin; KEGG: drm:Dred_2212 rubrerythrin; rubrerythrin 1566164..1566697 Desulfotomaculum ruminis DSM 2154 10737927 YP_004545095.1 CDS Desru_1544 NC_015589.1 1566815 1567915 D KEGG: drm:Dred_2210 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; GTP-binding protein YchF 1566815..1567915 Desulfotomaculum ruminis DSM 2154 10737928 YP_004545096.1 CDS Desru_1545 NC_015589.1 1568042 1569349 D PFAM: HI0933 family protein; KEGG: drm:Dred_2209 hypothetical protein; hypothetical protein 1568042..1569349 Desulfotomaculum ruminis DSM 2154 10737929 YP_004545097.1 CDS Desru_1546 NC_015589.1 1569587 1570279 D PFAM: Vitamin B12 dependent methionine synthase activation region; KEGG: drm:Dred_2208 vitamin B12 dependent methionine synthase, activation region; Vitamin B12 dependent methionine synthase activation subunit 1569587..1570279 Desulfotomaculum ruminis DSM 2154 10737930 YP_004545098.1 CDS Desru_1547 NC_015589.1 1570269 1572668 D PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: drm:Dred_2207 homocysteine S-methyltransferase; homocysteine S-methyltransferase 1570269..1572668 Desulfotomaculum ruminis DSM 2154 10737931 YP_004545099.1 CDS Desru_1548 NC_015589.1 1572689 1574314 D PFAM: ferredoxin; KEGG: drm:Dred_2206 ferredoxin; ferredoxin 1572689..1574314 Desulfotomaculum ruminis DSM 2154 10737932 YP_004545100.1 CDS Desru_1549 NC_015589.1 1574316 1574567 D KEGG: ehi:EHI_077750 hypothetical protein; hypothetical protein 1574316..1574567 Desulfotomaculum ruminis DSM 2154 10737933 YP_004545101.1 CDS Desru_1550 NC_015589.1 1574621 1574743 D KEGG: tbr:Tb927.5.2110 hypothetical protein; hypothetical protein 1574621..1574743 Desulfotomaculum ruminis DSM 2154 10737934 YP_004545102.1 CDS Desru_1551 NC_015589.1 1574930 1575145 D hypothetical protein 1574930..1575145 Desulfotomaculum ruminis DSM 2154 10737935 YP_004545103.1 CDS Desru_1552 NC_015589.1 1575234 1575629 D KEGG: drm:Dred_2204 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1575234..1575629 Desulfotomaculum ruminis DSM 2154 10737936 YP_004545104.1 CDS Desru_1553 NC_015589.1 1575705 1575893 D KEGG: drm:Dred_2203 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1575705..1575893 Desulfotomaculum ruminis DSM 2154 10737937 YP_004545105.1 CDS Desru_1554 NC_015589.1 1576062 1577261 D PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2202 glycosyl transferase, group 1; group 1 glycosyl transferase 1576062..1577261 Desulfotomaculum ruminis DSM 2154 10737938 YP_004545106.1 CDS Desru_1555 NC_015589.1 1577264 1579495 D KEGG: drm:Dred_2201 hypothetical protein; hypothetical protein 1577264..1579495 Desulfotomaculum ruminis DSM 2154 10737939 YP_004545107.1 CDS Desru_1556 NC_015589.1 1579786 1580169 D KEGG: drm:Dred_2200 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase 1579786..1580169 Desulfotomaculum ruminis DSM 2154 10737940 YP_004545108.1 CDS Desru_1557 NC_015589.1 1580333 1581109 D KEGG: drm:Dred_2199 hypothetical protein; hypothetical protein 1580333..1581109 Desulfotomaculum ruminis DSM 2154 10737941 YP_004545109.1 CDS Desru_1558 NC_015589.1 1581134 1581850 D KEGG: drm:Dred_2198 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 1581134..1581850 Desulfotomaculum ruminis DSM 2154 10737942 YP_004545110.1 CDS Desru_1559 NC_015589.1 1581834 1583375 D KEGG: drm:Dred_2197 UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 1581834..1583375 Desulfotomaculum ruminis DSM 2154 10737943 YP_004545111.1 CDS Desru_1560 NC_015589.1 1583365 1584234 D KEGG: drm:Dred_2196 4-hydroxybenzoate polyprenyltransferase, putative; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate polyprenyltransferase 1583365..1584234 Desulfotomaculum ruminis DSM 2154 10737944 YP_004545112.1 CDS Desru_1561 NC_015589.1 1584288 1585391 D KEGG: drm:Dred_2195 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1584288..1585391 Desulfotomaculum ruminis DSM 2154 10737945 YP_004545113.1 CDS Desru_1562 NC_015589.1 1585391 1586239 D PFAM: protein of unknown function DUF178; KEGG: drm:Dred_2194 hypothetical protein; hypothetical protein 1585391..1586239 Desulfotomaculum ruminis DSM 2154 10737946 YP_004545114.1 CDS Desru_1563 NC_015589.1 1586232 1587299 D manually curated; PFAM: Radical SAM domain protein; KEGG: drm:Dred_2193 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1586232..1587299 Desulfotomaculum ruminis DSM 2154 10737947 YP_004545115.1 CDS Desru_1564 NC_015589.1 1587333 1587824 R PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: tjr:TherJR_1577 rubrerythrin; rubrerythrin complement(1587333..1587824) Desulfotomaculum ruminis DSM 2154 10737948 YP_004545116.1 CDS Desru_1565 NC_015589.1 1588030 1588896 D TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: drm:Dred_2192 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1588030..1588896 Desulfotomaculum ruminis DSM 2154 10737949 YP_004545117.1 CDS Desru_1566 NC_015589.1 1589061 1589897 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: drm:Dred_2191 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1589061..1589897 Desulfotomaculum ruminis DSM 2154 10737950 YP_004545118.1 CDS Desru_1567 NC_015589.1 1590315 1592063 D KEGG: drm:Dred_2190 L-lactate transport; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport 1590315..1592063 Desulfotomaculum ruminis DSM 2154 10737951 YP_004545119.1 CDS Desru_1568 NC_015589.1 1592598 1594397 D KEGG: hmo:HM1_0368 glycolate permease glca; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport 1592598..1594397 Desulfotomaculum ruminis DSM 2154 10737952 YP_004545120.1 CDS Desru_1569 NC_015589.1 1594476 1595204 D KEGG: drm:Dred_2188 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1594476..1595204 Desulfotomaculum ruminis DSM 2154 10737953 YP_004545121.1 CDS Desru_1570 NC_015589.1 1595388 1596493 D KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein join(1595388..1595642,1595642..1596493) Desulfotomaculum ruminis DSM 2154 10737954 YP_004545122.1 CDS Desru_1571 NC_015589.1 1596534 1597298 D KEGG: drm:Dred_2188 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1596534..1597298 Desulfotomaculum ruminis DSM 2154 10737955 YP_004545123.1 CDS Desru_1572 NC_015589.1 1597405 1598829 D TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: drm:Dred_2186 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; L-seryl-tRNA selenium transferase 1597405..1598829 Desulfotomaculum ruminis DSM 2154 10737956 YP_004545124.1 CDS Desru_1573 NC_015589.1 1598826 1600736 D KEGG: drm:Dred_2185 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; selenocysteine-specific translation elongation factor 1598826..1600736 Desulfotomaculum ruminis DSM 2154 10737957 YP_004545125.1 CDS Desru_1574 NC_015589.1 1600772 1601167 D KEGG: drm:Dred_2181 hypothetical protein; hypothetical protein 1600772..1601167 Desulfotomaculum ruminis DSM 2154 10737958 YP_004545126.1 CDS Desru_1575 NC_015589.1 1601221 1601499 D KEGG: drm:Dred_2180 hypothetical protein; hypothetical protein 1601221..1601499 Desulfotomaculum ruminis DSM 2154 10737959 YP_004545127.1 CDS Desru_1576 NC_015589.1 1601570 1601779 D KEGG: gvi:gll0736 hypothetical protein; hypothetical protein 1601570..1601779 Desulfotomaculum ruminis DSM 2154 10737960 YP_004545128.1 CDS Desru_1577 NC_015589.1 1601893 1602675 D KEGG: drm:Dred_2179 metallophosphoesterase; PFAM: metallophosphoesterase; bis(5'-nucleosyl)-tetraphosphatase 1601893..1602675 Desulfotomaculum ruminis DSM 2154 10737961 YP_004545129.1 CDS Desru_1578 NC_015589.1 1602672 1602851 R KEGG: dba:Dbac_0645 hypothetical protein; hypothetical protein complement(1602672..1602851) Desulfotomaculum ruminis DSM 2154 10737962 YP_004545130.1 CDS Desru_1579 NC_015589.1 1602938 1603135 R KEGG: drm:Dred_2178 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(1602938..1603135) Desulfotomaculum ruminis DSM 2154 10737963 YP_004545131.1 CDS Desru_1580 NC_015589.1 1603500 1604615 D PFAM: basic membrane lipoprotein; KEGG: drm:Dred_2177 basic membrane lipoprotein; basic membrane lipoprotein 1603500..1604615 Desulfotomaculum ruminis DSM 2154 10737964 YP_004545132.1 CDS Desru_1581 NC_015589.1 1604677 1606206 D KEGG: drm:Dred_2176 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1604677..1606206 Desulfotomaculum ruminis DSM 2154 10737965 YP_004545133.1 CDS Desru_1582 NC_015589.1 1606203 1607297 D PFAM: inner-membrane translocator; KEGG: drm:Dred_2175 inner-membrane translocator; inner-membrane translocator 1606203..1607297 Desulfotomaculum ruminis DSM 2154 10737966 YP_004545134.1 CDS Desru_1583 NC_015589.1 1607302 1608234 D PFAM: inner-membrane translocator; KEGG: drm:Dred_2174 inner-membrane translocator; inner-membrane translocator 1607302..1608234 Desulfotomaculum ruminis DSM 2154 10737967 YP_004545135.1 CDS Desru_1584 NC_015589.1 1608256 1608828 D KEGG: drm:Dred_2173 xanthine phosphoribosyltransferase; TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; xanthine phosphoribosyltransferase 1608256..1608828 Desulfotomaculum ruminis DSM 2154 10737968 YP_004545136.1 CDS Desru_1585 NC_015589.1 1609017 1609937 D PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2172 hypothetical protein; S-layer protein 1609017..1609937 Desulfotomaculum ruminis DSM 2154 10737969 YP_004545137.1 CDS Desru_1586 NC_015589.1 1610178 1612292 R TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: dhd:Dhaf_2104 PTS system, lactose/cellobiose family IIC subunit; SMART: EAL domain protein; PTS system lactose/cellobiose family transporter subunit IIC complement(1610178..1612292) Desulfotomaculum ruminis DSM 2154 10737970 YP_004545138.1 CDS Desru_1587 NC_015589.1 1612364 1612648 R PFAM: Late competence development protein ComFB; KEGG: toc:Toce_1330 late competence development protein ComFB; late competence development protein ComFB complement(1612364..1612648) Desulfotomaculum ruminis DSM 2154 10737971 YP_004545139.1 CDS Desru_1588 NC_015589.1 1612883 1613809 D KEGG: tde:TDE0553 hypothetical protein; hypothetical protein 1612883..1613809 Desulfotomaculum ruminis DSM 2154 10737972 YP_004545140.1 CDS Desru_1589 NC_015589.1 1614125 1615408 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cpy:Cphy_1602 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1614125..1615408) Desulfotomaculum ruminis DSM 2154 10737973 YP_004545141.1 CDS Desru_1590 NC_015589.1 1615456 1615977 R PFAM: 4-vinyl reductase 4VR; KEGG: cpy:Cphy_1603 4-vinyl reductase 4VR; 4-vinyl reductase 4VR complement(1615456..1615977) Desulfotomaculum ruminis DSM 2154 10737974 YP_004545142.1 CDS Desru_1591 NC_015589.1 1616349 1618154 D KEGG: dae:Dtox_0613 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein 1616349..1618154 Desulfotomaculum ruminis DSM 2154 10737975 YP_004545143.1 CDS Desru_1592 NC_015589.1 1618452 1619393 D KEGG: aoe:Clos_1960 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; CheW domain-containing protein 1618452..1619393 Desulfotomaculum ruminis DSM 2154 10737976 YP_004545144.1 CDS Desru_1593 NC_015589.1 1619387 1621210 D KEGG: ppd:Ppro_0042 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein 1619387..1621210 Desulfotomaculum ruminis DSM 2154 10737977 YP_004545145.1 CDS Desru_1594 NC_015589.1 1621272 1622633 R PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_2190 glycosyl transferase family 2; family 2 glycosyl transferase complement(1621272..1622633) Desulfotomaculum ruminis DSM 2154 10737978 YP_004545146.1 CDS Desru_1595 NC_015589.1 1623154 1623729 D PFAM: GCN5-related N-acetyltransferase; KEGG: clj:CLJU_c30550 putative acetyltransferase; N-acetyltransferase GCN5 1623154..1623729 Desulfotomaculum ruminis DSM 2154 10737979 YP_004545147.1 CDS Desru_1596 NC_015589.1 1624090 1625409 R PFAM: ATP-binding region ATPase domain protein; KEGG: cpy:Cphy_1601 signal transduction histidine kinase regulating citrate/malate metabolism; ATP-binding protein complement(1624090..1625409) Desulfotomaculum ruminis DSM 2154 10737980 YP_004545148.1 CDS Desru_1597 NC_015589.1 1625427 1626164 R KEGG: cpy:Cphy_1600 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; LytTr DNA-binding protein complement(1625427..1626164) Desulfotomaculum ruminis DSM 2154 10737981 YP_004545149.1 CDS Desru_1598 NC_015589.1 1626646 1627083 R PFAM: UspA domain-containing protein; KEGG: drm:Dred_2171 UspA domain-containing protein; UspA domain-containing protein complement(1626646..1627083) Desulfotomaculum ruminis DSM 2154 10737982 YP_004545150.1 CDS Desru_1599 NC_015589.1 1627630 1628193 R PFAM: nitroreductase; KEGG: clj:CLJU_c35240 putative nitroreductase; nitroreductase complement(1627630..1628193) Desulfotomaculum ruminis DSM 2154 10737984 YP_004545151.1 CDS Desru_1600 NC_015589.1 1628266 1629201 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: cby:CLM_1318 UAA transporter family; hypothetical protein complement(1628266..1629201) Desulfotomaculum ruminis DSM 2154 10737985 YP_004545152.1 CDS Desru_1601 NC_015589.1 1629340 1630263 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_0517 LysR family transcriptional regulator; LysR substrate-binding protein 1629340..1630263 Desulfotomaculum ruminis DSM 2154 10737986 YP_004545153.1 CDS Desru_1602 NC_015589.1 1630461 1631126 D KEGG: drm:Dred_2170 hypothetical protein; hypothetical protein 1630461..1631126 Desulfotomaculum ruminis DSM 2154 10737987 YP_004545154.1 CDS Desru_1603 NC_015589.1 1631178 1631477 D KEGG: cel:T09A5.10 abnormal cell LINeage family member (lin-5); abnormal cell lineage family protein 1631178..1631477 Desulfotomaculum ruminis DSM 2154 10737988 YP_004545155.1 CDS Desru_1604 NC_015589.1 1631507 1631674 D KEGG: tva:TVAG_120770 hypothetical protein; hypothetical protein 1631507..1631674 Desulfotomaculum ruminis DSM 2154 10737989 YP_004545156.1 CDS Desru_1605 NC_015589.1 1631944 1632135 D KEGG: adg:Adeg_1516 ribosomal protein L29; 50S ribosomal protein L29 1631944..1632135 Desulfotomaculum ruminis DSM 2154 10737990 YP_004545157.1 CDS Desru_1606 NC_015589.1 1632175 1632693 D PFAM: GCN5-related N-acetyltransferase; KEGG: dal:Dalk_4393 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1632175..1632693 Desulfotomaculum ruminis DSM 2154 10737991 YP_004545158.1 CDS Desru_1607 NC_015589.1 1632759 1633397 D PFAM: Uncharacterised protein family UPF0126; KEGG: drm:Dred_0622 hypothetical protein; hypothetical protein 1632759..1633397 Desulfotomaculum ruminis DSM 2154 10737992 YP_004545159.1 CDS Desru_1608 NC_015589.1 1633793 1633963 R KEGG: spl:Spea_2481 hypothetical protein; hypothetical protein complement(1633793..1633963) Desulfotomaculum ruminis DSM 2154 10737994 YP_004545160.1 CDS Desru_1609 NC_015589.1 1634303 1634566 R KEGG: rle:pRL80010 hypothetical protein; hypothetical protein complement(1634303..1634566) Desulfotomaculum ruminis DSM 2154 10737995 YP_004545161.1 CDS Desru_1610 NC_015589.1 1635058 1635783 D PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2806 N-acetylmuramoyl-L-alanine amidase, putative; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 1635058..1635783 Desulfotomaculum ruminis DSM 2154 10737996 YP_004545162.1 CDS Desru_1611 NC_015589.1 1635953 1637194 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(1635953..1637194) Desulfotomaculum ruminis DSM 2154 10737997 YP_004545163.1 CDS Desru_1612 NC_015589.1 1637521 1640220 D KEGG: gym:GYMC10_5374 hypothetical protein; hypothetical protein 1637521..1640220 Desulfotomaculum ruminis DSM 2154 10737998 YP_004545164.1 CDS Desru_1613 NC_015589.1 1641075 1641542 R KEGG: ckr:CKR_2681 hypothetical protein; hypothetical protein complement(1641075..1641542) Desulfotomaculum ruminis DSM 2154 10737999 YP_004545165.1 CDS Desru_1614 NC_015589.1 1641659 1642204 R KEGG: dae:Dtox_1892 hypothetical protein; hypothetical protein complement(1641659..1642204) Desulfotomaculum ruminis DSM 2154 10738000 YP_004545166.1 CDS Desru_1615 NC_015589.1 1644205 1644855 R KEGG: drm:Dred_0422 hemolysin III family channel protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; hemolysin III family channel protein complement(1644205..1644855) Desulfotomaculum ruminis DSM 2154 10738002 YP_004545167.1 CDS Desru_1616 NC_015589.1 1645021 1645680 R KEGG: bpu:BPUM_1297 hypothetical protein; hypothetical protein complement(1645021..1645680) Desulfotomaculum ruminis DSM 2154 10738003 YP_004545168.1 CDS Desru_1617 NC_015589.1 1645816 1646118 R KEGG: drm:Dred_2167 hypothetical protein; hypothetical protein complement(1645816..1646118) Desulfotomaculum ruminis DSM 2154 10738004 YP_004545169.1 CDS Desru_1618 NC_015589.1 1646345 1647307 D PFAM: Polyprenyl synthetase; KEGG: drm:Dred_2166 trans-hexaprenyltranstransferase; polyprenyl synthetase 1646345..1647307 Desulfotomaculum ruminis DSM 2154 10738005 YP_004545170.1 CDS Desru_1619 NC_015589.1 1647319 1647960 D TIGRFAM: siroheme synthase; KEGG: drm:Dred_2165 siroheme synthase; siroheme synthase 1647319..1647960 Desulfotomaculum ruminis DSM 2154 10738006 YP_004545171.1 CDS Desru_1620 NC_015589.1 1647935 1649332 D KEGG: drm:Dred_2164 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; glutamyl-tRNA reductase 1647935..1649332 Desulfotomaculum ruminis DSM 2154 10738007 YP_004545172.1 CDS Desru_1621 NC_015589.1 1649350 1650279 D TIGRFAM: porphobilinogen deaminase; KEGG: drm:Dred_2163 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 1649350..1650279 Desulfotomaculum ruminis DSM 2154 10738008 YP_004545173.1 CDS Desru_1622 NC_015589.1 1650285 1651835 D KEGG: drm:Dred_2162 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; uroporphyrin-III C-methyltransferase 1650285..1651835 Desulfotomaculum ruminis DSM 2154 10738009 YP_004545174.1 CDS Desru_1623 NC_015589.1 1651864 1653030 D KEGG: drm:Dred_2161 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1651864..1653030 Desulfotomaculum ruminis DSM 2154 10738010 YP_004545175.1 CDS Desru_1624 NC_015589.1 1653179 1654162 D KEGG: drm:Dred_2160 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; porphobilinogen synthase 1653179..1654162 Desulfotomaculum ruminis DSM 2154 10738011 YP_004545176.1 CDS Desru_1625 NC_015589.1 1654163 1655155 D KEGG: drm:Dred_2159 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1654163..1655155 Desulfotomaculum ruminis DSM 2154 10738012 YP_004545177.1 CDS Desru_1626 NC_015589.1 1655156 1655623 D SMART: Transcription regulator AsnC-type; KEGG: drm:Dred_2158 AsnC family transcriptional regulator; transcriptional regulator AsnC-type-like protein 1655156..1655623 Desulfotomaculum ruminis DSM 2154 10738013 YP_004545178.1 CDS Desru_1627 NC_015589.1 1655643 1656116 D KEGG: drm:Dred_2157 AsnC family transcriptional regulator; AsnC family transcriptional regulator 1655643..1656116 Desulfotomaculum ruminis DSM 2154 10738014 YP_004545179.1 CDS Desru_1628 NC_015589.1 1656128 1657426 D KEGG: drm:Dred_2156 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; glutamate-1-semialdehyde-2,1-aminomutase 1656128..1657426 Desulfotomaculum ruminis DSM 2154 10738015 YP_004545180.1 CDS Desru_1629 NC_015589.1 1657472 1657783 D PFAM: protein of unknown function DUF74; KEGG: drm:Dred_2155 hypothetical protein; hypothetical protein 1657472..1657783 Desulfotomaculum ruminis DSM 2154 10738016 YP_004545181.1 CDS Desru_1630 NC_015589.1 1658045 1658464 R KEGG: drm:Dred_2154 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW domain-containing protein complement(1658045..1658464) Desulfotomaculum ruminis DSM 2154 10738017 YP_004545182.1 CDS Desru_1631 NC_015589.1 1658857 1659105 D KEGG: drm:Dred_2153 hypothetical protein; hypothetical protein 1658857..1659105 Desulfotomaculum ruminis DSM 2154 10738018 YP_004545183.1 CDS Desru_1632 NC_015589.1 1659109 1660527 D PFAM: fumarate lyase; Fumarase C-like; KEGG: pth:PTH_0981 aspartate ammonia-lyase; fumarate lyase 1659109..1660527 Desulfotomaculum ruminis DSM 2154 10738019 YP_004545184.1 CDS Desru_1633 NC_015589.1 1660548 1661777 D KEGG: drm:Dred_2152 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; small GTP-binding protein 1660548..1661777 Desulfotomaculum ruminis DSM 2154 10738020 YP_004545185.1 CDS Desru_1634 NC_015589.1 1661802 1662869 D KEGG: drm:Dred_2151 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1661802..1662869 Desulfotomaculum ruminis DSM 2154 10738021 YP_004545186.1 CDS Desru_1635 NC_015589.1 1662898 1664361 D PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: drm:Dred_2150 thiamine biosynthesis protein ThiH; biotin and thiamin synthesis associated protein 1662898..1664361 Desulfotomaculum ruminis DSM 2154 10738022 YP_004545187.1 CDS Desru_1636 NC_015589.1 1664496 1665110 D KEGG: drm:Dred_2149 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; TrkA-C domain protein; SMART: regulatory protein GntR HTH; regulatory protein GntR 1664496..1665110 Desulfotomaculum ruminis DSM 2154 10738023 YP_004545188.1 CDS Desru_1637 NC_015589.1 1665364 1666626 D TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: drm:Dred_2148 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 1665364..1666626 Desulfotomaculum ruminis DSM 2154 10738024 YP_004545189.1 CDS Desru_1638 NC_015589.1 1666842 1667051 D KEGG: dae:Dtox_4312 hypothetical protein; hypothetical protein 1666842..1667051 Desulfotomaculum ruminis DSM 2154 10738025 YP_004545190.1 CDS Desru_1639 NC_015589.1 1667116 1668228 D KEGG: drm:Dred_2147 hypothetical protein; hypothetical protein 1667116..1668228 Desulfotomaculum ruminis DSM 2154 10738026 YP_004545191.1 CDS Desru_1640 NC_015589.1 1668629 1668844 D KEGG: ddi:DDB_G0288695 hypothetical protein; hypothetical protein 1668629..1668844 Desulfotomaculum ruminis DSM 2154 10738027 YP_004545192.1 CDS Desru_1641 NC_015589.1 1668961 1669296 D KEGG: drm:Dred_2146 hypothetical protein; hypothetical protein 1668961..1669296 Desulfotomaculum ruminis DSM 2154 10738028 YP_004545193.1 CDS Desru_1642 NC_015589.1 1669685 1670791 D KEGG: cbe:Cbei_3346 putative DNA alkylation repair enzyme; putative DNA alkylation repair enzyme 1669685..1670791 Desulfotomaculum ruminis DSM 2154 10738030 YP_004545194.1 CDS Desru_1643 NC_015589.1 1670795 1671091 D PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: cbe:Cbei_3528 stress responsive alpha-beta barrel domain-containing protein; stress responsive alpha-beta barrel domain-containing protein 1670795..1671091 Desulfotomaculum ruminis DSM 2154 10738031 YP_004545195.1 CDS Desru_1644 NC_015589.1 1671196 1671837 D PFAM: regulatory protein TetR; KEGG: ele:Elen_2311 transcriptional regulator, TetR family; regulatory protein TetR 1671196..1671837 Desulfotomaculum ruminis DSM 2154 10738032 YP_004545196.1 CDS Desru_1645 NC_015589.1 1672319 1672972 D KEGG: cby:CLM_0802 transcriptional regulator, AraC family; AraC family transcriptional regulator 1672319..1672972 Desulfotomaculum ruminis DSM 2154 10738033 YP_004545197.1 CDS Desru_1646 NC_015589.1 1672953 1674191 D PFAM: oxidoreductase/nitrogenase component 1; KEGG: cbl:CLK_0093 hypothetical protein; oxidoreductase/nitrogenase component 1 1672953..1674191 Desulfotomaculum ruminis DSM 2154 10738034 YP_004545198.1 CDS Desru_1647 NC_015589.1 1674282 1675136 R KEGG: bmq:BMQ_1300 hypothetical protein; hypothetical protein complement(1674282..1675136) Desulfotomaculum ruminis DSM 2154 10738035 YP_004545199.1 CDS Desru_1648 NC_015589.1 1675546 1676007 R PFAM: GCN5-related N-acetyltransferase; KEGG: msm:MSMEG_0187 acetyltransferase; N-acetyltransferase GCN5 complement(1675546..1676007) Desulfotomaculum ruminis DSM 2154 10738036 YP_004545200.1 CDS Desru_1649 NC_015589.1 1676042 1676881 R KEGG: cdl:CDR20291_3183 hypothetical protein; hypothetical protein complement(1676042..1676881) Desulfotomaculum ruminis DSM 2154 10738037 YP_004545201.1 CDS Desru_1650 NC_015589.1 1677083 1677577 R KEGG: cfl:Cfla_0433 aminoglycoside-2''-adenylyltransferase; aminoglycoside-2''-adenylyltransferase complement(1677083..1677577) Desulfotomaculum ruminis DSM 2154 10738038 YP_004545202.1 CDS Desru_1651 NC_015589.1 1678751 1682581 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; PAS sensor protein 1678751..1682581 Desulfotomaculum ruminis DSM 2154 10738043 YP_004545203.1 CDS Desru_1652 NC_015589.1 1682732 1683808 D TIGRFAM: branched-chain amino acid aminotransferase; KEGG: drm:Dred_2144 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; branched-chain amino acid aminotransferase 1682732..1683808 Desulfotomaculum ruminis DSM 2154 10738044 YP_004545204.1 CDS Desru_1653 NC_015589.1 1683978 1684151 D hypothetical protein 1683978..1684151 Desulfotomaculum ruminis DSM 2154 10738045 YP_004545205.1 CDS Desru_1654 NC_015589.1 1684242 1684466 D KEGG: ptm:GSPATT00012299001 hypothetical protein; hypothetical protein 1684242..1684466 Desulfotomaculum ruminis DSM 2154 10738046 YP_004545206.1 CDS Desru_1655 NC_015589.1 1684662 1685816 D KEGG: slp:Slip_1454 hypothetical protein; hypothetical protein 1684662..1685816 Desulfotomaculum ruminis DSM 2154 10738047 YP_004545207.1 CDS Desru_1656 NC_015589.1 1685978 1686937 D KEGG: ckr:CKR_2728 hypothetical protein; hypothetical protein 1685978..1686937 Desulfotomaculum ruminis DSM 2154 10738048 YP_004545208.1 CDS Desru_1657 NC_015589.1 1686966 1687568 D manually curated; KEGG: pjd:Pjdr2_2955 dienelactone hydrolase; dienelactone hydrolase 1686966..1687568 Desulfotomaculum ruminis DSM 2154 10738049 YP_004545209.1 CDS Desru_1658 NC_015589.1 1687871 1689211 D PFAM: major facilitator superfamily MFS_1; KEGG: dds:Ddes_1414 major facilitator superfamily MFS_1; major facilitator superfamily protein 1687871..1689211 Desulfotomaculum ruminis DSM 2154 10738050 YP_004545210.1 CDS Desru_1659 NC_015589.1 1689310 1690242 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dhd:Dhaf_0858 transcriptional regulator, LysR family; regulatory protein LysR complement(1689310..1690242) Desulfotomaculum ruminis DSM 2154 10738051 YP_004545211.1 CDS Desru_1660 NC_015589.1 1690476 1690874 D KEGG: drm:Dred_0605 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 1690476..1690874 Desulfotomaculum ruminis DSM 2154 10738052 YP_004545212.1 CDS Desru_1661 NC_015589.1 1690890 1691729 D KEGG: drm:Dred_0606 hypothetical protein; hypothetical protein 1690890..1691729 Desulfotomaculum ruminis DSM 2154 10738053 YP_004545213.1 CDS Desru_1662 NC_015589.1 1691762 1693210 D KEGG: drm:Dred_0607 hypothetical protein; hypothetical protein 1691762..1693210 Desulfotomaculum ruminis DSM 2154 10738054 YP_004545214.1 CDS Desru_1663 NC_015589.1 1693279 1694655 D KEGG: drm:Dred_0608 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase 1693279..1694655 Desulfotomaculum ruminis DSM 2154 10738055 YP_004545215.1 CDS Desru_1664 NC_015589.1 1694830 1695540 D KEGG: drm:Dred_3227 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding protein 1694830..1695540 Desulfotomaculum ruminis DSM 2154 10738056 YP_004545216.1 CDS Desru_1666 NC_015589.1 1696126 1696530 D KEGG: drm:Dred_1481 camphor resistance CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB protein 1696126..1696530 Desulfotomaculum ruminis DSM 2154 10738058 YP_004545217.1 CDS Desru_1667 NC_015589.1 1696544 1696906 D KEGG: drm:Dred_1480 CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB protein 1696544..1696906 Desulfotomaculum ruminis DSM 2154 10738059 YP_004545218.1 CDS Desru_1668 NC_015589.1 1697622 1698776 D KEGG: drm:Dred_2123 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 1697622..1698776 Desulfotomaculum ruminis DSM 2154 10738061 YP_004545219.1 CDS Desru_1669 NC_015589.1 1698807 1699253 R KEGG: drm:Dred_2122 hypothetical protein; hypothetical protein complement(1698807..1699253) Desulfotomaculum ruminis DSM 2154 10738062 YP_004545220.1 CDS Desru_1670 NC_015589.1 1699273 1699983 R PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: drm:Dred_2121 nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region complement(1699273..1699983) Desulfotomaculum ruminis DSM 2154 10738063 YP_004545221.1 CDS Desru_1671 NC_015589.1 1700242 1700901 R KEGG: drm:Dred_2108 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; response regulator receiver complement(1700242..1700901) Desulfotomaculum ruminis DSM 2154 10738064 YP_004545222.1 CDS Desru_1672 NC_015589.1 1700920 1702065 R KEGG: drm:Dred_2107 histidine kinase; PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; sensor DegS domain-containing protein complement(1700920..1702065) Desulfotomaculum ruminis DSM 2154 10738065 YP_004545223.1 CDS Desru_1673 NC_015589.1 1702294 1704144 D KEGG: dae:Dtox_1954 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein 1702294..1704144 Desulfotomaculum ruminis DSM 2154 10738066 YP_004545224.1 CDS Desru_1674 NC_015589.1 1704353 1705213 D TIGRFAM: phosphate binding protein; KEGG: drm:Dred_2106 phosphate binding protein; phosphate binding protein 1704353..1705213 Desulfotomaculum ruminis DSM 2154 10738067 YP_004545225.1 CDS Desru_1675 NC_015589.1 1705353 1706204 D KEGG: drm:Dred_2105 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1705353..1706204 Desulfotomaculum ruminis DSM 2154 10738068 YP_004545226.1 CDS Desru_1676 NC_015589.1 1706206 1707054 D KEGG: drm:Dred_2104 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1706206..1707054 Desulfotomaculum ruminis DSM 2154 10738069 YP_004545227.1 CDS Desru_1677 NC_015589.1 1707228 1708058 D TIGRFAM: primosome, DnaD subunit; KEGG: drm:Dred_2103 primosome, DnaD subunit; primosome DnaD subunit 1707228..1708058 Desulfotomaculum ruminis DSM 2154 10738070 YP_004545228.1 CDS Desru_1678 NC_015589.1 1708169 1708882 D KEGG: drm:Dred_2102 cell wall hydrolase, SleB; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; cell wall hydrolase SleB 1708169..1708882 Desulfotomaculum ruminis DSM 2154 10738071 YP_004545229.1 CDS Desru_1679 NC_015589.1 1708923 1709687 R KEGG: drm:Dred_2101 manganese and iron superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; manganese/iron superoxide dismutase-like protein complement(1708923..1709687) Desulfotomaculum ruminis DSM 2154 10738072 YP_004545230.1 CDS Desru_1680 NC_015589.1 1709880 1711913 D KEGG: drm:Dred_2100 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1A family 1709880..1711913 Desulfotomaculum ruminis DSM 2154 10738073 YP_004545231.1 CDS Desru_1681 NC_015589.1 1711930 1712055 R KEGG: vvi:100244483 hypothetical protein LOC100244483; hypothetical protein complement(1711930..1712055) Desulfotomaculum ruminis DSM 2154 10738074 YP_004545232.1 CDS Desru_1682 NC_015589.1 1712106 1712381 R KEGG: fjo:Fjoh_1001 methyltransferase type 11; hypothetical protein complement(1712106..1712381) Desulfotomaculum ruminis DSM 2154 10738075 YP_004545233.1 CDS Desru_1683 NC_015589.1 1712348 1712611 R KEGG: drm:Dred_2099 hypothetical protein; hypothetical protein complement(1712348..1712611) Desulfotomaculum ruminis DSM 2154 10738076 YP_004545234.1 CDS Desru_1684 NC_015589.1 1713096 1713503 D KEGG: ftw:FTW_0360 hypothetical protein; hypothetical protein 1713096..1713503 Desulfotomaculum ruminis DSM 2154 10738078 YP_004545235.1 CDS Desru_1685 NC_015589.1 1713632 1713757 D hypothetical protein 1713632..1713757 Desulfotomaculum ruminis DSM 2154 10738079 YP_004545236.1 CDS Desru_1686 NC_015589.1 1713855 1715066 D PFAM: major facilitator superfamily MFS_1; KEGG: btb:BMB171_C4685 macrolide-efflux protein; major facilitator superfamily protein 1713855..1715066 Desulfotomaculum ruminis DSM 2154 10738080 YP_004545237.1 CDS Desru_1687 NC_015589.1 1715425 1715865 R PFAM: NUDIX hydrolase; KEGG: cbh:CLC_2706 MutT/NUDIX family protein; NUDIX hydrolase complement(1715425..1715865) Desulfotomaculum ruminis DSM 2154 10738081 YP_004545238.1 CDS Desru_1688 NC_015589.1 1716254 1716721 D KEGG: etr:ETAE_2867 amino acid transporter; hypothetical protein 1716254..1716721 Desulfotomaculum ruminis DSM 2154 10738082 YP_004545239.1 CDS Desru_1689 NC_015589.1 1716738 1717331 D PFAM: regulatory protein TetR; KEGG: bcl:ABC3460 TetR/AcrR family transcriptional regulator; regulatory protein TetR 1716738..1717331 Desulfotomaculum ruminis DSM 2154 10738083 YP_004545240.1 CDS Desru_1690 NC_015589.1 1717622 1718080 D KEGG: pth:PTH_1937 hypothetical protein; hypothetical protein 1717622..1718080 Desulfotomaculum ruminis DSM 2154 10738084 YP_004545241.1 CDS Desru_1691 NC_015589.1 1718171 1718890 R KEGG: rxy:Rxyl_2589 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1718171..1718890) Desulfotomaculum ruminis DSM 2154 10738085 YP_004545242.1 CDS Desru_1692 NC_015589.1 1719320 1720261 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: chy:CHY_2698 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1719320..1720261 Desulfotomaculum ruminis DSM 2154 10738086 YP_004545243.1 CDS Desru_1693 NC_015589.1 1720283 1721320 D KEGG: dhd:Dhaf_4412 malate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; malate dehydrogenase 1720283..1721320 Desulfotomaculum ruminis DSM 2154 10738087 YP_004545244.1 CDS Desru_1694 NC_015589.1 1721424 1721702 D PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein; SAF domain-containing protein 1721424..1721702 Desulfotomaculum ruminis DSM 2154 10738088 YP_004545245.1 CDS Desru_1695 NC_015589.1 1721711 1722871 D KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; altronate dehydratase 1721711..1722871 Desulfotomaculum ruminis DSM 2154 10738089 YP_004545246.1 CDS Desru_1696 NC_015589.1 1723264 1723761 D KEGG: met:M446_4285 hypothetical protein; hypothetical protein 1723264..1723761 Desulfotomaculum ruminis DSM 2154 10738090 YP_004545247.1 CDS Desru_1697 NC_015589.1 1723798 1725309 D PFAM: protein of unknown function DUF112 transmembrane; KEGG: dsy:DSY0654 hypothetical protein; hypothetical protein 1723798..1725309 Desulfotomaculum ruminis DSM 2154 10738091 YP_004545248.1 CDS Desru_1698 NC_015589.1 1725333 1726328 D KEGG: dhd:Dhaf_4416 hypothetical protein; hypothetical protein 1725333..1726328 Desulfotomaculum ruminis DSM 2154 10738092 YP_004545249.1 CDS Desru_1699 NC_015589.1 1726417 1727106 D PFAM: Integral membrane protein TerC; KEGG: bbe:BBR47_11800 hypothetical protein; integral membrane protein TerC 1726417..1727106 Desulfotomaculum ruminis DSM 2154 10738093 YP_004545250.1 CDS Desru_1700 NC_015589.1 1727836 1728114 D PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein; SAF domain-containing protein 1727836..1728114 Desulfotomaculum ruminis DSM 2154 10738094 YP_004545251.1 CDS Desru_1701 NC_015589.1 1728123 1729283 D KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; altronate dehydratase 1728123..1729283 Desulfotomaculum ruminis DSM 2154 10738095 YP_004545252.1 CDS Desru_1702 NC_015589.1 1729424 1730410 D KEGG: dhd:Dhaf_4416 hypothetical protein; hypothetical protein 1729424..1730410 Desulfotomaculum ruminis DSM 2154 10738096 YP_004545253.1 CDS Desru_1703 NC_015589.1 1730485 1730628 R hypothetical protein complement(1730485..1730628) Desulfotomaculum ruminis DSM 2154 10738097 YP_004545254.1 CDS Desru_1704 NC_015589.1 1731151 1731798 D PFAM: Propanediol utilization protein; KEGG: drm:Dred_2095 propanediol utilization protein; propanediol utilization protein 1731151..1731798 Desulfotomaculum ruminis DSM 2154 10738098 YP_004545255.1 CDS Desru_1705 NC_015589.1 1731855 1733042 D KEGG: drm:Dred_2094 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 1731855..1733042 Desulfotomaculum ruminis DSM 2154 10738099 YP_004545256.1 CDS Desru_1706 NC_015589.1 1733712 1734845 D TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: drm:Dred_2093 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 1733712..1734845 Desulfotomaculum ruminis DSM 2154 10738100 YP_004545257.1 CDS Desru_1707 NC_015589.1 1734920 1735480 D TIGRFAM: riboflavin synthase, alpha subunit; KEGG: drm:Dred_2092 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 1734920..1735480 Desulfotomaculum ruminis DSM 2154 10738101 YP_004545258.1 CDS Desru_1708 NC_015589.1 1735496 1736722 D KEGG: drm:Dred_2091 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1735496..1736722 Desulfotomaculum ruminis DSM 2154 10738102 YP_004545259.1 CDS Desru_1709 NC_015589.1 1736760 1737227 D KEGG: drm:Dred_2090 riboflavin synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1736760..1737227 Desulfotomaculum ruminis DSM 2154 10738103 YP_004545260.1 CDS Desru_1710 NC_015589.1 1737405 1737593 R KEGG: drm:Dred_2089 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 complement(1737405..1737593) Desulfotomaculum ruminis DSM 2154 10738104 YP_004545261.1 CDS Desru_1711 NC_015589.1 1737838 1739892 D TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: drm:Dred_2088 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent DNA helicase RecG 1737838..1739892 Desulfotomaculum ruminis DSM 2154 10738105 YP_004545262.1 CDS Desru_1712 NC_015589.1 1740265 1740792 D PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: det:DET1173 FwdE family protein; formylmethanofuran dehydrogenase subunit E 1740265..1740792 Desulfotomaculum ruminis DSM 2154 10738106 YP_004545263.1 CDS Desru_1713 NC_015589.1 1740813 1741913 D PFAM: periplasmic binding protein; KEGG: dsy:DSY0390 hypothetical protein; periplasmic binding protein 1740813..1741913 Desulfotomaculum ruminis DSM 2154 10738107 YP_004545264.1 CDS Desru_1714 NC_015589.1 1741919 1742971 D PFAM: transport system permease protein; KEGG: dae:Dtox_0485 transport system permease protein; transport system permease 1741919..1742971 Desulfotomaculum ruminis DSM 2154 10738108 YP_004545265.1 CDS Desru_1715 NC_015589.1 1742968 1743729 D KEGG: dae:Dtox_0486 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1742968..1743729 Desulfotomaculum ruminis DSM 2154 10738109 YP_004545266.1 CDS Desru_1716 NC_015589.1 1743915 1744937 D KEGG: dhd:Dhaf_0589 hypothetical protein; hypothetical protein 1743915..1744937 Desulfotomaculum ruminis DSM 2154 10738110 YP_004545267.1 CDS Desru_1717 NC_015589.1 1745216 1745404 D KEGG: drm:Dred_2087 hypothetical protein; hypothetical protein 1745216..1745404 Desulfotomaculum ruminis DSM 2154 10738111 YP_004545268.1 CDS Desru_1718 NC_015589.1 1745401 1746387 R TIGRFAM: spore protease; KEGG: drm:Dred_2086 germination protease; PFAM: peptidase M63 germination protease; spore protease complement(1745401..1746387) Desulfotomaculum ruminis DSM 2154 10738112 YP_004545269.1 CDS Desru_1719 NC_015589.1 1746558 1747112 D KEGG: drm:Dred_2085 putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein CHP00095; methyltransferase 1746558..1747112 Desulfotomaculum ruminis DSM 2154 10738113 YP_004545270.1 CDS Desru_1720 NC_015589.1 1747126 1747614 D TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: drm:Dred_2084 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 1747126..1747614 Desulfotomaculum ruminis DSM 2154 10738114 YP_004545271.1 CDS Desru_1721 NC_015589.1 1747632 1748072 D KEGG: drm:Dred_2083 vacuolar-type H+-ATPase subunit H; vacuolar-type H+-ATPase subunit H 1747632..1748072 Desulfotomaculum ruminis DSM 2154 10738115 YP_004545272.1 CDS Desru_1722 NC_015589.1 1748126 1748443 R KEGG: mth:MTH483 hypothetical protein; hypothetical protein complement(1748126..1748443) Desulfotomaculum ruminis DSM 2154 10738116 YP_004545273.1 CDS Desru_1723 NC_015589.1 1748649 1749698 R PFAM: DRTGG domain protein; KEGG: drm:Dred_2082 DRTGG domain-containing protein; DRTGG domain-containing protein complement(1748649..1749698) Desulfotomaculum ruminis DSM 2154 10738117 YP_004545274.1 CDS Desru_1724 NC_015589.1 1749749 1751854 R KEGG: drm:Dred_2081 CoA-binding domain-containing protein; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain protein; PFAM: CoA-binding domain protein; acetyl CoA synthetase subunit alpha complement(1749749..1751854) Desulfotomaculum ruminis DSM 2154 10738118 YP_004545275.1 CDS Desru_1725 NC_015589.1 1751986 1753245 R KEGG: drm:Dred_2080 nucleoside recognition domain-containing protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; sporulation integral membrane protein YlbJ complement(1751986..1753245) Desulfotomaculum ruminis DSM 2154 10738119 YP_004545276.1 CDS Desru_1726 NC_015589.1 1753420 1753923 D KEGG: drm:Dred_2079 hypothetical protein; manually curated; PFAM: protein of unknown function DUF177; hypothetical protein 1753420..1753923 Desulfotomaculum ruminis DSM 2154 10738120 YP_004545277.1 CDS Desru_1727 NC_015589.1 1753959 1754144 D KEGG: drm:Dred_2078 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 1753959..1754144 Desulfotomaculum ruminis DSM 2154 10738121 YP_004545278.1 CDS Desru_1728 NC_015589.1 1754379 1754951 D PFAM: regulatory protein DeoR; KEGG: drm:Dred_2077 fatty acid biosynthesis transcriptional regulator; regulatory protein DeoR 1754379..1754951 Desulfotomaculum ruminis DSM 2154 10738122 YP_004545279.1 CDS Desru_1729 NC_015589.1 1754951 1755955 D KEGG: drm:Dred_2076 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX 1754951..1755955 Desulfotomaculum ruminis DSM 2154 10738123 YP_004545280.1 CDS Desru_1730 NC_015589.1 1755956 1756969 D KEGG: drm:Dred_2075 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1755956..1756969 Desulfotomaculum ruminis DSM 2154 10738124 YP_004545281.1 CDS Desru_1731 NC_015589.1 1756966 1757913 D KEGG: drm:Dred_2074 2-nitropropane dioxygenase, NPD; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase NPD; enoyl-ACP reductase 1756966..1757913 Desulfotomaculum ruminis DSM 2154 10738125 YP_004545282.1 CDS Desru_1732 NC_015589.1 1757918 1758865 D KEGG: drm:Dred_2073 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase 1757918..1758865 Desulfotomaculum ruminis DSM 2154 10738126 YP_004545283.1 CDS Desru_1733 NC_015589.1 1758867 1759610 D KEGG: drm:Dred_2072 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase 1758867..1759610 Desulfotomaculum ruminis DSM 2154 10738127 YP_004545284.1 CDS Desru_1734 NC_015589.1 1759676 1759906 D KEGG: drm:Dred_2071 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; acyl carrier protein 1759676..1759906 Desulfotomaculum ruminis DSM 2154 10738128 YP_004545285.1 CDS Desru_1735 NC_015589.1 1759972 1761213 D KEGG: drm:Dred_2070 beta-ketoacyl synthase; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 1759972..1761213 Desulfotomaculum ruminis DSM 2154 10738129 YP_004545286.1 CDS Desru_1736 NC_015589.1 1761229 1761978 D SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: drm:Dred_2069 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 1761229..1761978 Desulfotomaculum ruminis DSM 2154 10738130 YP_004545287.1 CDS Desru_1737 NC_015589.1 1761994 1765545 D KEGG: drm:Dred_2068 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein; chromosome segregation protein SMC 1761994..1765545 Desulfotomaculum ruminis DSM 2154 10738131 YP_004545288.1 CDS Desru_1738 NC_015589.1 1765647 1766576 D TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: drm:Dred_2067 signal recognition particle-docking protein FtsY; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1765647..1766576 Desulfotomaculum ruminis DSM 2154 10738132 YP_004545289.1 CDS Desru_1739 NC_015589.1 1766855 1768195 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: dae:Dtox_3544 protein of unknown function DUF21; hypothetical protein 1766855..1768195 Desulfotomaculum ruminis DSM 2154 10738133 YP_004545290.1 CDS Desru_1740 NC_015589.1 1768274 1768441 R KEGG: taf:THA_837 transcriptional regulator, TetR family, putative; hypothetical protein complement(1768274..1768441) Desulfotomaculum ruminis DSM 2154 10738134 YP_004545291.1 CDS Desru_1741 NC_015589.1 1768495 1769220 R PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2806 N-acetylmuramoyl-L-alanine amidase, putative; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase complement(1768495..1769220) Desulfotomaculum ruminis DSM 2154 10738135 YP_004545292.1 CDS Desru_1742 NC_015589.1 1769421 1769594 R hypothetical protein complement(1769421..1769594) Desulfotomaculum ruminis DSM 2154 10738136 YP_004545293.1 CDS Desru_1743 NC_015589.1 1769606 1770925 R KEGG: ckr:CKR_2872 hypothetical protein; hypothetical protein complement(1769606..1770925) Desulfotomaculum ruminis DSM 2154 10738137 YP_004545294.1 CDS Desru_1744 NC_015589.1 1770939 1771490 R KEGG: gym:GYMC10_5391 hypothetical protein; hypothetical protein complement(1770939..1771490) Desulfotomaculum ruminis DSM 2154 10738138 YP_004545295.1 CDS Desru_1745 NC_015589.1 1771487 1772602 R PFAM: Baseplate J family protein; KEGG: ckr:CKR_2875 hypothetical protein; baseplate J family protein complement(1771487..1772602) Desulfotomaculum ruminis DSM 2154 10738139 YP_004545296.1 CDS Desru_1746 NC_015589.1 1772583 1773026 R PFAM: GPW/gp25 family protein; KEGG: gvi:gll1413 hypothetical protein; GPW/gp25 family protein complement(1772583..1773026) Desulfotomaculum ruminis DSM 2154 10738140 YP_004545297.1 CDS Desru_1747 NC_015589.1 1772995 1773369 R KEGG: swi:Swit_2568 ribokinase-like domain-containing protein; hypothetical protein complement(1772995..1773369) Desulfotomaculum ruminis DSM 2154 10738141 YP_004545298.1 CDS Desru_1748 NC_015589.1 1773372 1774442 R KEGG: bgl:bglu_1g20340 hypothetical protein; hypothetical protein complement(1773372..1774442) Desulfotomaculum ruminis DSM 2154 10738142 YP_004545299.1 CDS Desru_1749 NC_015589.1 1774442 1775014 R KEGG: dhd:Dhaf_1417 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein complement(1774442..1775014) Desulfotomaculum ruminis DSM 2154 10738143 YP_004545300.1 CDS Desru_1750 NC_015589.1 1775032 1777089 R KEGG: afl:Aflv_0673 phage-related tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein TP901 family complement(1775032..1777089) Desulfotomaculum ruminis DSM 2154 10738144 YP_004545301.1 CDS Desru_1751 NC_015589.1 1777170 1777382 D KEGG: vha:VIBHAR_05109 hypothetical protein; hypothetical protein 1777170..1777382 Desulfotomaculum ruminis DSM 2154 10738145 YP_004545302.1 CDS Desru_1752 NC_015589.1 1777471 1777866 R KEGG: lga:LGAS_1829 ABC-type multidrug transport system, ATPase and permease component; hypothetical protein complement(1777471..1777866) Desulfotomaculum ruminis DSM 2154 10738146 YP_004545303.1 CDS Desru_1753 NC_015589.1 1777884 1778318 R KEGG: hau:Haur_1774 hypothetical protein; hypothetical protein complement(1777884..1778318) Desulfotomaculum ruminis DSM 2154 10738147 YP_004545304.1 CDS Desru_1754 NC_015589.1 1778308 1778532 R KEGG: dae:Dtox_0532 4Fe-4S ferredoxin iron-sulfur binding domain protein; hypothetical protein complement(1778308..1778532) Desulfotomaculum ruminis DSM 2154 10738148 YP_004545305.1 CDS Desru_1755 NC_015589.1 1778547 1779953 R KEGG: cfl:Cfla_2260 tail sheath protein; hypothetical protein complement(1778547..1779953) Desulfotomaculum ruminis DSM 2154 10738149 YP_004545306.1 CDS Desru_1756 NC_015589.1 1779971 1780450 R KEGG: fpl:Ferp_1025 hypothetical protein; hypothetical protein complement(1779971..1780450) Desulfotomaculum ruminis DSM 2154 10738150 YP_004545307.1 CDS Desru_1757 NC_015589.1 1780443 1781045 R KEGG: btr:Btr_2621 hypothetical protein; hypothetical protein complement(1780443..1781045) Desulfotomaculum ruminis DSM 2154 10738151 YP_004545308.1 CDS Desru_1758 NC_015589.1 1781042 1781503 R KEGG: ppp:PHYPADRAFT_166969 hypothetical protein; hypothetical protein complement(1781042..1781503) Desulfotomaculum ruminis DSM 2154 10738152 YP_004545309.1 CDS Desru_1759 NC_015589.1 1781510 1782841 R KEGG: clj:CLJU_c31310 phage-like protein; hypothetical protein complement(1781510..1782841) Desulfotomaculum ruminis DSM 2154 10738153 YP_004545310.1 CDS Desru_1760 NC_015589.1 1782997 1783989 R KEGG: abu:Abu_1669 Mu-like prophage I protein, putative; hypothetical protein complement(1782997..1783989) Desulfotomaculum ruminis DSM 2154 10738154 YP_004545311.1 CDS Desru_1761 NC_015589.1 1784006 1784830 R KEGG: npu:Npun_R2610 SPP1 family phage head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; phage head morphogenesis protein SPP1 gp7 family complement(1784006..1784830) Desulfotomaculum ruminis DSM 2154 10738155 YP_004545312.1 CDS Desru_1762 NC_015589.1 1784820 1786091 R KEGG: dap:Dacet_2219 hypothetical protein; hypothetical protein complement(1784820..1786091) Desulfotomaculum ruminis DSM 2154 10738156 YP_004545313.1 CDS Desru_1763 NC_015589.1 1786104 1787744 R KEGG: dal:Dalk_4561 bacteriophage tail assembly protein-like protein; hypothetical protein complement(1786104..1787744) Desulfotomaculum ruminis DSM 2154 10738157 YP_004545314.1 CDS Desru_1764 NC_015589.1 1787745 1788281 R KEGG: amt:Amet_1950 hypothetical protein; hypothetical protein complement(1787745..1788281) Desulfotomaculum ruminis DSM 2154 10738158 YP_004545315.1 CDS Desru_1765 NC_015589.1 1788281 1788583 R KEGG: hth:HTH_0884 hypothetical protein; hypothetical protein complement(1788281..1788583) Desulfotomaculum ruminis DSM 2154 10738159 YP_004545316.1 CDS Desru_1766 NC_015589.1 1788561 1788905 R KEGG: amt:Amet_4371 hypothetical protein; hypothetical protein complement(1788561..1788905) Desulfotomaculum ruminis DSM 2154 10738160 YP_004545317.1 CDS Desru_1767 NC_015589.1 1788907 1789332 R KEGG: dae:Dtox_4222 hypothetical protein; hypothetical protein complement(1788907..1789332) Desulfotomaculum ruminis DSM 2154 10738161 YP_004545318.1 CDS Desru_1768 NC_015589.1 1789478 1789807 R PFAM: Mor transcription activator domain protein; KEGG: dae:Dtox_4221 Mor transcription activator domain protein; Mor transcription activator domain-containing protein complement(1789478..1789807) Desulfotomaculum ruminis DSM 2154 10738162 YP_004545319.1 CDS Desru_1769 NC_015589.1 1789811 1790203 R KEGG: amt:Amet_4387 hypothetical protein; hypothetical protein complement(1789811..1790203) Desulfotomaculum ruminis DSM 2154 10738163 YP_004545320.1 CDS Desru_1770 NC_015589.1 1790216 1790707 R KEGG: mca:MCA2948 prophage MuMc02, host-nuclease inhibitor protein; prophage MuMc02 host-nuclease inhibitor protein complement(1790216..1790707) Desulfotomaculum ruminis DSM 2154 10738164 YP_004545321.1 CDS Desru_1771 NC_015589.1 1790720 1791115 R KEGG: dae:Dtox_4218 hypothetical protein; hypothetical protein complement(1790720..1791115) Desulfotomaculum ruminis DSM 2154 10738165 YP_004545322.1 CDS Desru_1772 NC_015589.1 1791152 1791625 R KEGG: dsy:DSY2192 hypothetical protein; hypothetical protein complement(1791152..1791625) Desulfotomaculum ruminis DSM 2154 10738166 YP_004545323.1 CDS Desru_1773 NC_015589.1 1792085 1792318 R KEGG: cpi:Cpin_0093 group II decarboxylase family protein; hypothetical protein complement(1792085..1792318) Desulfotomaculum ruminis DSM 2154 10738167 YP_004545324.1 CDS Desru_1775 NC_015589.1 1792732 1793526 R manually curated; PFAM: IstB domain protein ATP-binding protein; KEGG: dae:Dtox_4220 IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB domain-containing protein ATP-binding protein complement(1792732..1793526) Desulfotomaculum ruminis DSM 2154 10738169 YP_004545325.1 CDS Desru_1776 NC_015589.1 1793429 1793818 R KEGG: nhl:Nhal_3406 Appr-1-p processing domain protein; hypothetical protein complement(1793429..1793818) Desulfotomaculum ruminis DSM 2154 10738170 YP_004545326.1 CDS Desru_1777 NC_015589.1 1793835 1794206 R KEGG: dvi:Dvir_GJ10692 GJ10692 gene product from transcript GJ10692-RA; hypothetical protein complement(1793835..1794206) Desulfotomaculum ruminis DSM 2154 10738171 YP_004545327.1 CDS Desru_1778 NC_015589.1 1794337 1794840 R KEGG: tva:TVAG_174520 SNF7 family protein; hypothetical protein complement(1794337..1794840) Desulfotomaculum ruminis DSM 2154 10738172 YP_004545328.1 CDS Desru_1779 NC_015589.1 1794853 1795827 R KEGG: amt:Amet_4393 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: AAA ATPase; helix-turn-helix domain-containing protein complement(1794853..1795827) Desulfotomaculum ruminis DSM 2154 10738173 YP_004545329.1 CDS Desru_1780 NC_015589.1 1795846 1797933 R PFAM: Transposase-like Mu ; Integrase catalytic region; KEGG: amt:Amet_0388 transposase; transposase-like Mu complement(1795846..1797933) Desulfotomaculum ruminis DSM 2154 10738174 YP_004545330.1 CDS Desru_1781 NC_015589.1 1798138 1798329 R KEGG: dhd:Dhaf_4545 putative phage regulatory protein; hypothetical protein complement(1798138..1798329) Desulfotomaculum ruminis DSM 2154 10738175 YP_004545331.1 CDS Desru_1782 NC_015589.1 1798515 1799399 D TIGRFAM: LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; KEGG: drm:Dred_1183 putative prophage repressor; SMART: helix-turn-helix domain protein; LexA repressor 1798515..1799399 Desulfotomaculum ruminis DSM 2154 10738176 YP_004545332.1 CDS Desru_1783 NC_015589.1 1803753 1805060 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: drm:Dred_1580 hypothetical protein; hypothetical protein complement(1803753..1805060) Desulfotomaculum ruminis DSM 2154 10738177 YP_004545333.1 CDS Desru_1784 NC_015589.1 1805200 1805694 D KEGG: drm:Dred_0419 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; regulatory protein MerR 1805200..1805694 Desulfotomaculum ruminis DSM 2154 10738178 YP_004545334.1 CDS Desru_1785 NC_015589.1 1805730 1806680 D PFAM: SpoOM family protein; KEGG: drm:Dred_0420 SpoOM family protein; SpoOM family protein 1805730..1806680 Desulfotomaculum ruminis DSM 2154 10738179 YP_004545335.1 CDS Desru_1786 NC_015589.1 1806707 1807558 D PFAM: peptidase M48 Ste24p; KEGG: drm:Dred_0421 peptidase M48, Ste24p; peptidase M48 Ste24p 1806707..1807558 Desulfotomaculum ruminis DSM 2154 10738180 YP_004545336.1 CDS Desru_1787 NC_015589.1 1807802 1808593 D KEGG: drm:Dred_2065 5'-methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; methylthioadenosine phosphorylase 1807802..1808593 Desulfotomaculum ruminis DSM 2154 10738181 YP_004545337.1 CDS Desru_1788 NC_015589.1 1808599 1809651 D TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: drm:Dred_2064 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related; translation initiation factor aIF-2BI family 1808599..1809651 Desulfotomaculum ruminis DSM 2154 10738182 YP_004545338.1 CDS Desru_1789 NC_015589.1 1809653 1810909 D TIGRFAM: adenosylhomocysteinase; KEGG: drm:Dred_2063 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; adenosylhomocysteinase 1809653..1810909 Desulfotomaculum ruminis DSM 2154 10738183 YP_004545339.1 CDS Desru_1790 NC_015589.1 1810925 1811578 D PFAM: class II aldolase/adducin family protein; KEGG: drm:Dred_2062 class II aldolase/adducin family protein; class II aldolase/adducin family protein 1810925..1811578 Desulfotomaculum ruminis DSM 2154 10738184 YP_004545340.1 CDS Desru_1791 NC_015589.1 1811651 1812955 D PFAM: amidohydrolase; KEGG: drm:Dred_2061 amidohydrolase; amidohydrolase 1811651..1812955 Desulfotomaculum ruminis DSM 2154 10738185 YP_004545341.1 CDS Desru_1792 NC_015589.1 1813077 1814252 D KEGG: drm:Dred_2060 PUA domain-containing protein; PFAM: ribosomal L11 methyltransferase; SMART: PUA domain containing protein; ribosomal L11 methyltransferase 1813077..1814252 Desulfotomaculum ruminis DSM 2154 10738186 YP_004545342.1 CDS Desru_1793 NC_015589.1 1814760 1815335 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_1655 hypothetical protein; copper amine oxidase-like domain-containing protein complement(1814760..1815335) Desulfotomaculum ruminis DSM 2154 10738187 YP_004545343.1 CDS Desru_1794 NC_015589.1 1815438 1816514 R KEGG: amt:Amet_0496 S-layer domain-containing protein; hypothetical protein complement(1815438..1816514) Desulfotomaculum ruminis DSM 2154 10738188 YP_004545344.1 CDS Desru_1795 NC_015589.1 1817234 1818406 R PFAM: AAA-4 family protein; KEGG: drm:Dred_2059 putative transcriptional regulator; AAA ATPase complement(1817234..1818406) Desulfotomaculum ruminis DSM 2154 10738189 YP_004545345.1 CDS Desru_1796 NC_015589.1 1818518 1819930 R KEGG: drm:Dred_2058 aminotransferase class-III; PFAM: aminotransferase class-III; acetylornithine transaminase complement(1818518..1819930) Desulfotomaculum ruminis DSM 2154 10738190 YP_004545346.1 CDS Desru_1797 NC_015589.1 1820129 1820485 D KEGG: drm:Dred_2057 putative DNA-binding protein; manually curated; PFAM: helix-turn-helix protein YlxM/p13 family protein; helix-turn-helix protein YlxM/p13 family protein 1820129..1820485 Desulfotomaculum ruminis DSM 2154 10738191 YP_004545347.1 CDS Desru_1798 NC_015589.1 1820536 1821891 D TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: drm:Dred_2056 signal recognition particle protein; SMART: AAA ATPase; signal recognition particle protein 1820536..1821891 Desulfotomaculum ruminis DSM 2154 10738192 YP_004545348.1 CDS Desru_1799 NC_015589.1 1822115 1822384 D KEGG: drm:Dred_2055 ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; 30S ribosomal protein S16 1822115..1822384 Desulfotomaculum ruminis DSM 2154 10738193 YP_004545349.1 CDS Desru_1800 NC_015589.1 1822407 1822634 D KEGG: drm:Dred_2054 hypothetical protein; hypothetical protein 1822407..1822634 Desulfotomaculum ruminis DSM 2154 10738194 YP_004545350.1 CDS Desru_1801 NC_015589.1 1822712 1823134 D KEGG: drm:Dred_2053 hypothetical protein; hypothetical protein 1822712..1823134 Desulfotomaculum ruminis DSM 2154 10738195 YP_004545351.1 CDS Desru_1802 NC_015589.1 1823127 1823633 D KEGG: drm:Dred_2052 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM 1823127..1823633 Desulfotomaculum ruminis DSM 2154 10738196 YP_004545352.1 CDS Desru_1803 NC_015589.1 1823643 1824398 D TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: drm:Dred_2051 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 1823643..1824398 Desulfotomaculum ruminis DSM 2154 10738197 YP_004545353.1 CDS Desru_1804 NC_015589.1 1824517 1824864 D KEGG: drm:Dred_2050 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 1824517..1824864 Desulfotomaculum ruminis DSM 2154 10738198 YP_004545354.1 CDS Desru_1805 NC_015589.1 1824918 1825475 D TIGRFAM: signal peptidase I; KEGG: drm:Dred_2049 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 1824918..1825475 Desulfotomaculum ruminis DSM 2154 10738199 YP_004545355.1 CDS Desru_1806 NC_015589.1 1825557 1826408 D KEGG: drm:Dred_2048 GTP-binding protein, HSR1-related; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YlqF 1825557..1826408 Desulfotomaculum ruminis DSM 2154 10738200 YP_004545356.1 CDS Desru_1807 NC_015589.1 1826532 1827179 D KEGG: amt:Amet_2740 ribonuclease H; PFAM: ribonuclease HII/HIII; Ribonuclease H 1826532..1827179 Desulfotomaculum ruminis DSM 2154 10738201 YP_004545357.1 CDS Desru_1808 NC_015589.1 1827695 1828048 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: drm:Dred_2046 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1827695..1828048 Desulfotomaculum ruminis DSM 2154 10738202 YP_004545358.1 CDS Desru_1809 NC_015589.1 1828039 1828617 D TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: drm:Dred_2045 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 1828039..1828617 Desulfotomaculum ruminis DSM 2154 10738203 YP_004545359.1 CDS Desru_1810 NC_015589.1 1828617 1829042 D KEGG: drm:Dred_2044 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 1828617..1829042 Desulfotomaculum ruminis DSM 2154 10738204 YP_004545360.1 CDS Desru_1811 NC_015589.1 1829072 1830172 D TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: drm:Dred_2043 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I D subunit 1829072..1830172 Desulfotomaculum ruminis DSM 2154 10738205 YP_004545361.1 CDS Desru_1812 NC_015589.1 1830194 1831243 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: drm:Dred_2042 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 1830194..1831243 Desulfotomaculum ruminis DSM 2154 10738206 YP_004545362.1 CDS Desru_1813 NC_015589.1 1831250 1831765 D KEGG: drm:Dred_2041 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1831250..1831765 Desulfotomaculum ruminis DSM 2154 10738207 YP_004545363.1 CDS Desru_1814 NC_015589.1 1831749 1832267 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: drm:Dred_2040 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1831749..1832267 Desulfotomaculum ruminis DSM 2154 10738208 YP_004545364.1 CDS Desru_1815 NC_015589.1 1832251 1832568 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: drm:Dred_2039 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 1832251..1832568 Desulfotomaculum ruminis DSM 2154 10738209 YP_004545365.1 CDS Desru_1816 NC_015589.1 1832588 1834534 D KEGG: drm:Dred_2038 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase chain L 1832588..1834534 Desulfotomaculum ruminis DSM 2154 10738210 YP_004545366.1 CDS Desru_1817 NC_015589.1 1834531 1836045 D KEGG: drm:Dred_2037 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase chain M 1834531..1836045 Desulfotomaculum ruminis DSM 2154 10738211 YP_004545367.1 CDS Desru_1818 NC_015589.1 1836048 1837478 D KEGG: drm:Dred_2036 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase chain N 1836048..1837478 Desulfotomaculum ruminis DSM 2154 10738212 YP_004545368.1 CDS Desru_1819 NC_015589.1 1837653 1838021 D PFAM: Uncharacterised protein family UPF0102; KEGG: drm:Dred_2035 hypothetical protein; hypothetical protein 1837653..1838021 Desulfotomaculum ruminis DSM 2154 10738213 YP_004545369.1 CDS Desru_1820 NC_015589.1 1838258 1838512 R KEGG: drm:Dred_2034 hypothetical protein; hypothetical protein complement(1838258..1838512) Desulfotomaculum ruminis DSM 2154 10738214 YP_004545370.1 CDS Desru_1821 NC_015589.1 1838548 1838697 R hypothetical protein complement(1838548..1838697) Desulfotomaculum ruminis DSM 2154 10738215 YP_004545371.1 CDS Desru_1822 NC_015589.1 1838783 1839670 R KEGG: tna:CTN_0053 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1838783..1839670) Desulfotomaculum ruminis DSM 2154 10738216 YP_004545372.1 CDS Desru_1823 NC_015589.1 1839782 1840357 R KEGG: drm:Dred_2286 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 family RNA polymerase sigma factor complement(1839782..1840357) Desulfotomaculum ruminis DSM 2154 10738217 YP_004545373.1 CDS Desru_1824 NC_015589.1 1840972 1842591 R KEGG: drm:Dred_2263 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein complement(1840972..1842591) Desulfotomaculum ruminis DSM 2154 10738218 YP_004545374.1 CDS Desru_1825 NC_015589.1 1842981 1843376 R KEGG: mta:Moth_1001 hypothetical protein; hypothetical protein complement(1842981..1843376) Desulfotomaculum ruminis DSM 2154 10738219 YP_004545375.1 CDS Desru_1826 NC_015589.1 1843394 1844515 R PFAM: aminotransferase class I and II; KEGG: drt:Dret_1447 aminotransferase class I and II; class I and II aminotransferase complement(1843394..1844515) Desulfotomaculum ruminis DSM 2154 10738220 YP_004545376.1 CDS Desru_1827 NC_015589.1 1844724 1846256 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: drm:Dred_2023 Mg chelatase, subunit ChlI; SMART: AAA ATPase; Mg chelatase subunit ChlI 1844724..1846256 Desulfotomaculum ruminis DSM 2154 10738221 YP_004545377.1 CDS Desru_1828 NC_015589.1 1846413 1846583 D hypothetical protein 1846413..1846583 Desulfotomaculum ruminis DSM 2154 10738222 YP_004545378.1 CDS Desru_1829 NC_015589.1 1846558 1847841 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: hmo:HM1_0096 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 1846558..1847841 Desulfotomaculum ruminis DSM 2154 10738223 YP_004545379.1 CDS Desru_1830 NC_015589.1 1847870 1848787 D TIGRFAM: homoserine O-succinyltransferase; KEGG: cce:Ccel_3331 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 1847870..1848787 Desulfotomaculum ruminis DSM 2154 10738224 YP_004545380.1 CDS Desru_1832 NC_015589.1 1850186 1850632 D KEGG: dsy:DSY4291 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 1850186..1850632 Desulfotomaculum ruminis DSM 2154 10738226 YP_004545381.1 CDS Desru_1833 NC_015589.1 1850648 1851004 R KEGG: dpe:Dper_GL24408 GL24408 gene product from transcript GL24408-RA; hypothetical protein complement(1850648..1851004) Desulfotomaculum ruminis DSM 2154 10738227 YP_004545382.1 CDS Desru_1834 NC_015589.1 1851201 1851410 R KEGG: tde:TDE2409 hypothetical protein; hypothetical protein complement(1851201..1851410) Desulfotomaculum ruminis DSM 2154 10738228 YP_004545383.1 CDS Desru_1835 NC_015589.1 1851566 1852423 D PFAM: protein of unknown function DUF89; KEGG: pth:PTH_0661 hypothetical protein; hypothetical protein 1851566..1852423 Desulfotomaculum ruminis DSM 2154 10738229 YP_004545384.1 CDS Desru_1836 NC_015589.1 1852839 1853033 R hypothetical protein complement(1852839..1853033) Desulfotomaculum ruminis DSM 2154 10738230 YP_004545385.1 CDS Desru_1837 NC_015589.1 1853033 1853404 R PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: pth:PTH_1685 hypothetical protein; DnaJ family protein complement(1853033..1853404) Desulfotomaculum ruminis DSM 2154 10738231 YP_004545386.1 CDS Desru_1839 NC_015589.1 1854414 1855697 D PFAM: Citrate transporter; KEGG: drm:Dred_1990 citrate transporter; citrate transporter 1854414..1855697 Desulfotomaculum ruminis DSM 2154 10738233 YP_004545387.1 CDS Desru_1840 NC_015589.1 1855748 1856212 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2720 N-acetylmuramoyl-L-alanine amidase, putative; copper amine oxidase-like domain-containing protein complement(1855748..1856212) Desulfotomaculum ruminis DSM 2154 10738234 YP_004545388.1 CDS Desru_1841 NC_015589.1 1856578 1856760 R KEGG: pti:PHATRDRAFT_54326 suppressor of stem-loop protein 1; hypothetical protein complement(1856578..1856760) Desulfotomaculum ruminis DSM 2154 10738235 YP_004545389.1 CDS Desru_1842 NC_015589.1 1856780 1857088 R KEGG: ath:AT3G02050 KUP3 (K+ UPTAKE TRANSPORTER 3); potassium ion transmembrane transporter; hypothetical protein complement(1856780..1857088) Desulfotomaculum ruminis DSM 2154 10738236 YP_004545390.1 CDS Desru_1843 NC_015589.1 1857250 1858083 D SMART: AAA ATPase; KEGG: drm:Dred_2013 AAA ATPase; AAA ATPase 1857250..1858083 Desulfotomaculum ruminis DSM 2154 10738237 YP_004545391.1 CDS Desru_1844 NC_015589.1 1858557 1859036 R PFAM: protein of unknown function DUF456; KEGG: drm:Dred_2010 hypothetical protein; hypothetical protein complement(1858557..1859036) Desulfotomaculum ruminis DSM 2154 10738238 YP_004545392.1 CDS Desru_1845 NC_015589.1 1859265 1860668 D PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: drm:Dred_2009 hypothetical protein; hypothetical protein 1859265..1860668 Desulfotomaculum ruminis DSM 2154 10738239 YP_004545393.1 CDS Desru_1846 NC_015589.1 1860640 1861362 D PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: drm:Dred_2008 glutamine amidotransferase; CobB/CobQ domain-containing protein glutamine amidotransferase 1860640..1861362 Desulfotomaculum ruminis DSM 2154 10738240 YP_004545394.1 CDS Desru_1847 NC_015589.1 1861489 1861635 D KEGG: pth:PTH_1647 hypothetical protein; hypothetical protein 1861489..1861635 Desulfotomaculum ruminis DSM 2154 10738241 YP_004545395.1 CDS Desru_1848 NC_015589.1 1861975 1863870 D KEGG: drm:Dred_2006 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; PrkA AAA domain-containing protein 1861975..1863870 Desulfotomaculum ruminis DSM 2154 10738242 YP_004545396.1 CDS Desru_1849 NC_015589.1 1863882 1865030 D KEGG: drm:Dred_2005 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; sporulation protein YhbH 1863882..1865030 Desulfotomaculum ruminis DSM 2154 10738243 YP_004545397.1 CDS Desru_1850 NC_015589.1 1865033 1866436 D PFAM: SpoVR family protein; KEGG: drm:Dred_2004 SpoVR family protein; SpoVR family protein 1865033..1866436 Desulfotomaculum ruminis DSM 2154 10738244 YP_004545398.1 CDS Desru_1851 NC_015589.1 1866747 1867574 D TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: drm:Dred_2003 Ku domain-containing protein; SMART: Ku domain protein; Ku protein 1866747..1867574 Desulfotomaculum ruminis DSM 2154 10738245 YP_004545399.1 CDS Desru_1852 NC_015589.1 1867586 1868536 D KEGG: drm:Dred_2002 ATP dependent DNA ligase; TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA polymerase LigD ligase domain-containing protein 1867586..1868536 Desulfotomaculum ruminis DSM 2154 10738246 YP_004545400.1 CDS Desru_1853 NC_015589.1 1868572 1869933 R KEGG: drm:Dred_2001 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; sigma-54 factor interaction domain-containing protein complement(1868572..1869933) Desulfotomaculum ruminis DSM 2154 10738247 YP_004545401.1 CDS Desru_1854 NC_015589.1 1869923 1871461 R KEGG: drm:Dred_2000 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein complement(1869923..1871461) Desulfotomaculum ruminis DSM 2154 10738248 YP_004545402.1 CDS Desru_1855 NC_015589.1 1871779 1872366 D PFAM: CBS domain containing protein; KEGG: drm:Dred_1999 CBS domain-containing protein; hypothetical protein 1871779..1872366 Desulfotomaculum ruminis DSM 2154 10738249 YP_004545403.1 CDS Desru_1856 NC_015589.1 1872382 1872702 D KEGG: drm:Dred_1998 hypothetical protein; hypothetical protein 1872382..1872702 Desulfotomaculum ruminis DSM 2154 10738250 YP_004545404.1 CDS Desru_1857 NC_015589.1 1872730 1873521 D KEGG: drm:Dred_1997 helix-turn-helix, type 11 domain-containing protein; helix-turn-helix domain-containing protein 1872730..1873521 Desulfotomaculum ruminis DSM 2154 10738251 YP_004545405.1 CDS Desru_1858 NC_015589.1 1873740 1875476 D PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: drm:Dred_1995 sulphate transporter; sulfate transporter 1873740..1875476 Desulfotomaculum ruminis DSM 2154 10738252 YP_004545406.1 CDS Desru_1859 NC_015589.1 1876055 1876336 D KEGG: drm:Dred_1993 hypothetical protein; hypothetical protein 1876055..1876336 Desulfotomaculum ruminis DSM 2154 10738253 YP_004545407.1 CDS Desru_1860 NC_015589.1 1876731 1877108 D PFAM: Protein of unknown function DUF2294; KEGG: drm:Dred_1992 hypothetical protein; hypothetical protein 1876731..1877108 Desulfotomaculum ruminis DSM 2154 10738254 YP_004545408.1 CDS Desru_1861 NC_015589.1 1877227 1878141 D KEGG: drm:Dred_1986 DNA primase, small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; DNA polymerase LigD polymerase domain-containing protein 1877227..1878141 Desulfotomaculum ruminis DSM 2154 10738255 YP_004545409.1 CDS Desru_1862 NC_015589.1 1878174 1879319 D KEGG: drm:Dred_1985 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 1878174..1879319 Desulfotomaculum ruminis DSM 2154 10738256 YP_004545410.1 CDS Desru_1863 NC_015589.1 1879450 1881636 D SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: drm:Dred_1984 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I 1879450..1881636 Desulfotomaculum ruminis DSM 2154 10738257 YP_004545411.1 CDS Desru_1864 NC_015589.1 1881730 1883061 D TIGRFAM: gid protein; KEGG: drm:Dred_1983 gid protein; PFAM: glucose-inhibited division protein A; hypothetical protein 1881730..1883061 Desulfotomaculum ruminis DSM 2154 10738258 YP_004545412.1 CDS Desru_1865 NC_015589.1 1883132 1884028 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_1982 tyrosine recombinase XerC; integrase family protein 1883132..1884028 Desulfotomaculum ruminis DSM 2154 10738259 YP_004545413.1 CDS Desru_1866 NC_015589.1 1884056 1884586 D PFAM: 20S proteasome A and B subunits; KEGG: drm:Dred_1981 ATP-dependent protease peptidase subunit; 20S proteasome subunits A and B 1884056..1884586 Desulfotomaculum ruminis DSM 2154 10738260 YP_004545414.1 CDS Desru_1867 NC_015589.1 1884636 1886036 D TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: drm:Dred_1980 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase; heat shock protein HslVU ATPase subunit HslU 1884636..1886036 Desulfotomaculum ruminis DSM 2154 10738261 YP_004545415.1 CDS Desru_1868 NC_015589.1 1886056 1886841 D KEGG: drm:Dred_1979 transcriptional repressor CodY; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein; GTP-sensing transcriptional pleiotropic repressor CodY 1886056..1886841 Desulfotomaculum ruminis DSM 2154 10738262 YP_004545416.1 CDS Desru_1869 NC_015589.1 1887106 1887804 D KEGG: drm:Dred_1978 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 1887106..1887804 Desulfotomaculum ruminis DSM 2154 10738263 YP_004545417.1 CDS Desru_1870 NC_015589.1 1887935 1888588 D KEGG: drm:Dred_1977 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 1887935..1888588 Desulfotomaculum ruminis DSM 2154 10738264 YP_004545418.1 CDS Desru_1871 NC_015589.1 1888675 1889394 D KEGG: drm:Dred_1976 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 1888675..1889394 Desulfotomaculum ruminis DSM 2154 10738265 YP_004545419.1 CDS Desru_1872 NC_015589.1 1889396 1889950 D KEGG: drm:Dred_1975 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor 1889396..1889950 Desulfotomaculum ruminis DSM 2154 10738266 YP_004545420.1 CDS Desru_1873 NC_015589.1 1889952 1890164 D KEGG: nda:Ndas_5307 glycosyl transferase family 51; hypothetical protein 1889952..1890164 Desulfotomaculum ruminis DSM 2154 10738267 YP_004545421.1 CDS Desru_1874 NC_015589.1 1890165 1890329 D KEGG: drm:Dred_1974 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1890165..1890329 Desulfotomaculum ruminis DSM 2154 10738268 YP_004545422.1 CDS Desru_1875 NC_015589.1 1890382 1891170 D TIGRFAM: undecaprenyl diphosphate synthase; KEGG: drm:Dred_1973 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1890382..1891170 Desulfotomaculum ruminis DSM 2154 10738269 YP_004545423.1 CDS Desru_1876 NC_015589.1 1891185 1891970 D PFAM: phosphatidate cytidylyltransferase; KEGG: drm:Dred_1972 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1891185..1891970 Desulfotomaculum ruminis DSM 2154 10738270 YP_004545424.1 CDS Desru_1877 NC_015589.1 1891996 1893087 D KEGG: drm:Dred_1971 hypothetical protein; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; sporulation integral membrane protein YtvI 1891996..1893087 Desulfotomaculum ruminis DSM 2154 10738271 YP_004545425.1 CDS Desru_1878 NC_015589.1 1893111 1894268 D TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: drm:Dred_1970 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1893111..1894268 Desulfotomaculum ruminis DSM 2154 10738272 YP_004545426.1 CDS Desru_1879 NC_015589.1 1894279 1895322 D TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_1969 putative membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 1894279..1895322 Desulfotomaculum ruminis DSM 2154 10738273 YP_004545427.1 CDS Desru_1880 NC_015589.1 1895337 1896386 D KEGG: drm:Dred_1968 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1895337..1896386 Desulfotomaculum ruminis DSM 2154 10738274 YP_004545428.1 CDS Desru_1881 NC_015589.1 1896415 1898121 D KEGG: drm:Dred_1967 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; prolyl-tRNA synthetase 1896415..1898121 Desulfotomaculum ruminis DSM 2154 10738275 YP_004545429.1 CDS Desru_1882 NC_015589.1 1898131 1899297 D PFAM: Monogalactosyldiacylglycerol synthase; glycosyl transferase group 1; KEGG: drm:Dred_1966 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 1898131..1899297 Desulfotomaculum ruminis DSM 2154 10738276 YP_004545430.1 CDS Desru_1883 NC_015589.1 1899329 1903606 D TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: drm:Dred_1965 DNA polymerase III, alpha subunit; SMART: Exonuclease; phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1899329..1903606 Desulfotomaculum ruminis DSM 2154 10738277 YP_004545431.1 CDS Desru_1884 NC_015589.1 1903613 1904917 R KEGG: drm:Dred_1964 hypothetical protein; hypothetical protein complement(1903613..1904917) Desulfotomaculum ruminis DSM 2154 10738278 YP_004545432.1 CDS Desru_1885 NC_015589.1 1905082 1906032 D PFAM: polysaccharide deacetylase; KEGG: drm:Dred_1963 polysaccharide deacetylase; polysaccharide deacetylase 1905082..1906032 Desulfotomaculum ruminis DSM 2154 10738279 YP_004545433.1 CDS Desru_1886 NC_015589.1 1906234 1906758 D KEGG: dae:Dtox_0377 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 family RNA polymerase sigma factor 1906234..1906758 Desulfotomaculum ruminis DSM 2154 10738280 YP_004545434.1 CDS Desru_1887 NC_015589.1 1906826 1907908 D KEGG: dae:Dtox_0378 hypothetical protein; hypothetical protein 1906826..1907908 Desulfotomaculum ruminis DSM 2154 10738281 YP_004545435.1 CDS Desru_1889 NC_015589.1 1908882 1909987 R KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(join(1908882..1909733,1909733..1909987)) Desulfotomaculum ruminis DSM 2154 10738283 YP_004545436.1 CDS Desru_1891 NC_015589.1 1911672 1911887 R KEGG: cce:Ccel_1489 hypothetical protein; hypothetical protein complement(1911672..1911887) Desulfotomaculum ruminis DSM 2154 10738285 YP_004545437.1 CDS Desru_1892 NC_015589.1 1912550 1912774 D KEGG: ere:EUBREC_1946 transcription elongation factor NusA; transcription elongation factor NusA 1912550..1912774 Desulfotomaculum ruminis DSM 2154 10738286 YP_004545438.1 CDS Desru_1893 NC_015589.1 1912971 1914005 D KEGG: drm:Dred_1962 hypothetical protein; hypothetical protein 1912971..1914005 Desulfotomaculum ruminis DSM 2154 10738287 YP_004545439.1 CDS Desru_1894 NC_015589.1 1914112 1914411 D KEGG: adg:Adeg_1917 hypothetical protein; hypothetical protein 1914112..1914411 Desulfotomaculum ruminis DSM 2154 10738288 YP_004545440.1 CDS Desru_1895 NC_015589.1 1914605 1915066 D PFAM: protein of unknown function DUF150; KEGG: drm:Dred_1961 hypothetical protein; hypothetical protein 1914605..1915066 Desulfotomaculum ruminis DSM 2154 10738289 YP_004545441.1 CDS Desru_1896 NC_015589.1 1915090 1916256 D KEGG: drm:Dred_1960 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; transcription termination factor NusA 1915090..1916256 Desulfotomaculum ruminis DSM 2154 10738290 YP_004545442.1 CDS Desru_1897 NC_015589.1 1916269 1916535 D PFAM: protein of unknown function DUF448; KEGG: drm:Dred_1959 hypothetical protein; hypothetical protein 1916269..1916535 Desulfotomaculum ruminis DSM 2154 10738291 YP_004545443.1 CDS Desru_1898 NC_015589.1 1916536 1916847 D PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: drm:Dred_1958 ribosomal protein L7Ae/L30e/S12e/Gadd45; 50S ribosomal protein L7Ae/L30e/S12e/Gadd45 1916536..1916847 Desulfotomaculum ruminis DSM 2154 10738292 YP_004545444.1 CDS Desru_1899 NC_015589.1 1916885 1919923 D KEGG: drm:Dred_1957 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; translation initiation factor IF-2 1916885..1919923 Desulfotomaculum ruminis DSM 2154 10738293 YP_004545445.1 CDS Desru_1900 NC_015589.1 1919955 1920317 D KEGG: drm:Dred_1956 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 1919955..1920317 Desulfotomaculum ruminis DSM 2154 10738294 YP_004545446.1 CDS Desru_1901 NC_015589.1 1920310 1921281 D PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: drm:Dred_1955 phosphoesterase domain-containing protein; phosphoesterase RecJ domain-containing protein 1920310..1921281 Desulfotomaculum ruminis DSM 2154 10738295 YP_004545447.1 CDS Desru_1902 NC_015589.1 1921283 1922218 D KEGG: drm:Dred_1954 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; PUA domain containing protein; tRNA pseudouridine synthase B 1921283..1922218 Desulfotomaculum ruminis DSM 2154 10738296 YP_004545448.1 CDS Desru_1903 NC_015589.1 1922304 1923227 D KEGG: drm:Dred_1953 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF 1922304..1923227 Desulfotomaculum ruminis DSM 2154 10738297 YP_004545449.1 CDS Desru_1904 NC_015589.1 1923365 1923595 D KEGG: dae:Dtox_3183 hypothetical protein; hypothetical protein 1923365..1923595 Desulfotomaculum ruminis DSM 2154 10738298 YP_004545450.1 CDS Desru_1905 NC_015589.1 1923607 1923828 D manually curated; KEGG: tjr:TherJR_1383 hypothetical protein; hypothetical protein 1923607..1923828 Desulfotomaculum ruminis DSM 2154 10738299 YP_004545451.1 CDS Desru_1906 NC_015589.1 1923917 1924186 D KEGG: drm:Dred_1951 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 1923917..1924186 Desulfotomaculum ruminis DSM 2154 10738300 YP_004545452.1 CDS Desru_1907 NC_015589.1 1924343 1926568 D SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: drm:Dred_1950 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; polyribonucleotide nucleotidyltransferase 1924343..1926568 Desulfotomaculum ruminis DSM 2154 10738301 YP_004545453.1 CDS Desru_1908 NC_015589.1 1926718 1927476 D KEGG: drm:Dred_1949 cell wall hydrolase, SleB; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; spore cortex-lytic protein 1926718..1927476 Desulfotomaculum ruminis DSM 2154 10738302 YP_004545454.1 CDS Desru_1909 NC_015589.1 1927547 1928185 R KEGG: ckr:CKR_1271 hypothetical protein; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; protein PASTA domain-containing protein complement(1927547..1928185) Desulfotomaculum ruminis DSM 2154 10738303 YP_004545455.1 CDS Desru_1910 NC_015589.1 1928399 1929139 D PFAM: polysaccharide deacetylase; KEGG: drm:Dred_1948 polysaccharide deacetylase; polysaccharide deacetylase 1928399..1929139 Desulfotomaculum ruminis DSM 2154 10738304 YP_004545456.1 CDS Desru_1911 NC_015589.1 1929269 1930537 D PFAM: peptidase M16 domain protein; KEGG: drm:Dred_1947 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein 1929269..1930537 Desulfotomaculum ruminis DSM 2154 10738305 YP_004545457.1 CDS Desru_1912 NC_015589.1 1930653 1930994 D KEGG: drm:Dred_1946 hypothetical protein; hypothetical protein 1930653..1930994 Desulfotomaculum ruminis DSM 2154 10738306 YP_004545458.1 CDS Desru_1913 NC_015589.1 1931007 1931276 D KEGG: drm:Dred_1945 hypothetical protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; YlmC/YmxH family sporulation protein 1931007..1931276 Desulfotomaculum ruminis DSM 2154 10738307 YP_004545459.1 CDS Desru_1914 NC_015589.1 1931517 1932317 D PFAM: dihydrodipicolinate reductase; manually curated; KEGG: drm:Dred_1944 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 1931517..1932317 Desulfotomaculum ruminis DSM 2154 10738308 YP_004545460.1 CDS Desru_1915 NC_015589.1 1932425 1933327 D KEGG: drm:Dred_1943 dipicolinate synthase subunit A; TIGRFAM: dipicolinic acid synthetase, A subunit; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; dipicolinic acid synthetase subunit A 1932425..1933327 Desulfotomaculum ruminis DSM 2154 10738309 YP_004545461.1 CDS Desru_1916 NC_015589.1 1933354 1933941 D KEGG: drm:Dred_1942 dipicolinate synthase subunit B; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: flavoprotein; dipicolinic acid synthetase subunit B 1933354..1933941 Desulfotomaculum ruminis DSM 2154 10738310 YP_004545462.1 CDS Desru_1917 NC_015589.1 1933989 1935011 D TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: drm:Dred_1941 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 1933989..1935011 Desulfotomaculum ruminis DSM 2154 10738311 YP_004545463.1 CDS Desru_1918 NC_015589.1 1935014 1936249 D KEGG: drm:Dred_1940 aspartate kinase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 1935014..1936249 Desulfotomaculum ruminis DSM 2154 10738312 YP_004545464.1 CDS Desru_1919 NC_015589.1 1936293 1937183 D KEGG: drm:Dred_1939 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 1936293..1937183 Desulfotomaculum ruminis DSM 2154 10738313 YP_004545465.1 CDS Desru_1920 NC_015589.1 1937408 1939072 D PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: drm:Dred_1938 beta-lactamase domain-containing protein; RNA-metabolising metallo-beta-lactamase 1937408..1939072 Desulfotomaculum ruminis DSM 2154 10738314 YP_004545466.1 CDS Desru_1921 NC_015589.1 1939307 1939963 D manually curated; KEGG: amt:Amet_2249 hypothetical protein; hypothetical protein 1939307..1939963 Desulfotomaculum ruminis DSM 2154 10738315 YP_004545467.1 CDS Desru_1922 NC_015589.1 1940353 1941174 D PFAM: peptidase S14 ClpP; KEGG: drm:Dred_1937 peptidase S14, ClpP; peptidase S14 ClpP 1940353..1941174 Desulfotomaculum ruminis DSM 2154 10738316 YP_004545468.1 CDS Desru_1923 NC_015589.1 1941171 1941386 D KEGG: pth:PTH_1291 hypothetical protein; hypothetical protein 1941171..1941386 Desulfotomaculum ruminis DSM 2154 10738317 YP_004545469.1 CDS Desru_1924 NC_015589.1 1941601 1942017 R PFAM: Coat F domain protein; KEGG: drm:Dred_1935 coat F domain-containing protein; Coat F domain-containing protein complement(1941601..1942017) Desulfotomaculum ruminis DSM 2154 10738318 YP_004545470.1 CDS Desru_1925 NC_015589.1 1942037 1942249 R KEGG: tpd:Teth39_0443 hypothetical protein; hypothetical protein complement(1942037..1942249) Desulfotomaculum ruminis DSM 2154 10738319 YP_004545471.1 CDS Desru_1926 NC_015589.1 1942400 1944679 D PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: drm:Dred_1934 cell divisionFtsK/SpoIIIE; cell division protein FtsK 1942400..1944679 Desulfotomaculum ruminis DSM 2154 10738320 YP_004545472.1 CDS Desru_1927 NC_015589.1 1944888 1946015 D TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese domain protein; KEGG: drm:Dred_1933 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; tRNA 2-selenouridine synthase 1944888..1946015 Desulfotomaculum ruminis DSM 2154 10738321 YP_004545473.1 CDS Desru_1928 NC_015589.1 1945993 1946706 D KEGG: drm:Dred_1932 hypothetical protein; hypothetical protein 1945993..1946706 Desulfotomaculum ruminis DSM 2154 10738322 YP_004545474.1 CDS Desru_1930 NC_015589.1 1947633 1949774 R PFAM: General secretory system II protein E domain protein; KEGG: ele:Elen_1600 bacteriophage N4 adsorption protein B; general secretory system II protein E domain-containing protein complement(1947633..1949774) Desulfotomaculum ruminis DSM 2154 10738324 YP_004545475.1 CDS Desru_1932 NC_015589.1 1950627 1950935 R KEGG: aca:ACP_2165 hypothetical protein; hypothetical protein complement(1950627..1950935) Desulfotomaculum ruminis DSM 2154 10738326 YP_004545476.1 CDS Desru_1933 NC_015589.1 1951038 1951235 R KEGG: dba:Dbac_0853 hydrogenase, putative; hypothetical protein complement(1951038..1951235) Desulfotomaculum ruminis DSM 2154 10738327 YP_004545477.1 CDS Desru_1934 NC_015589.1 1951640 1951903 R manually curated; KEGG: drm:Dred_1929 hypothetical protein; hypothetical protein complement(1951640..1951903) Desulfotomaculum ruminis DSM 2154 10738328 YP_004545478.1 CDS Desru_1935 NC_015589.1 1952033 1952608 R PFAM: SMF family protein; KEGG: drm:Dred_1928 DNA uptake Rossmann fold nucleotide-binding protein; SMF family protein complement(1952033..1952608) Desulfotomaculum ruminis DSM 2154 10738329 YP_004545479.1 CDS Desru_1936 NC_015589.1 1952706 1953206 D PFAM: protein of unknown function DUF520; KEGG: drm:Dred_1927 putative nucleotide-binding protein; hypothetical protein 1952706..1953206 Desulfotomaculum ruminis DSM 2154 10738330 YP_004545480.1 CDS Desru_1937 NC_015589.1 1953282 1954619 D TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: drm:Dred_1926 MiaB-like tRNA modifying enzyme YliG; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 1953282..1954619 Desulfotomaculum ruminis DSM 2154 10738331 YP_004545481.1 CDS Desru_1938 NC_015589.1 1954616 1955161 D TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: drm:Dred_1925 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1954616..1955161 Desulfotomaculum ruminis DSM 2154 10738332 YP_004545482.1 CDS Desru_1939 NC_015589.1 1955279 1955851 D KEGG: drm:Dred_1924 hypothetical protein; hypothetical protein 1955279..1955851 Desulfotomaculum ruminis DSM 2154 10738333 YP_004545483.1 CDS Desru_1940 NC_015589.1 1955835 1957316 D PFAM: AAA ATPase central domain protein; peptidase M41; KEGG: drm:Dred_1923 vesicle-fusing ATPase; SMART: AAA ATPase; Vesicle-fusing ATPase 1955835..1957316 Desulfotomaculum ruminis DSM 2154 10738334 YP_004545484.1 CDS Desru_1941 NC_015589.1 1957450 1958688 D KEGG: drm:Dred_1922 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; competence/damage-inducible protein CinA 1957450..1958688 Desulfotomaculum ruminis DSM 2154 10738335 YP_004545485.1 CDS Desru_1942 NC_015589.1 1958719 1960317 D KEGG: drm:Dred_1921 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 1958719..1960317 Desulfotomaculum ruminis DSM 2154 10738336 YP_004545486.1 CDS Desru_1943 NC_015589.1 1960623 1961669 D TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: drm:Dred_1920 RecA protein; SMART: AAA ATPase; recA protein 1960623..1961669 Desulfotomaculum ruminis DSM 2154 10738337 YP_004545487.1 CDS Desru_1944 NC_015589.1 1961981 1963522 D TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: drm:Dred_1919 phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; YmdA/YtgF protein 1961981..1963522 Desulfotomaculum ruminis DSM 2154 10738338 YP_004545488.1 CDS Desru_1945 NC_015589.1 1963795 1964313 D KEGG: drm:Dred_1918 hypothetical protein; hypothetical protein 1963795..1964313 Desulfotomaculum ruminis DSM 2154 10738339 YP_004545489.1 CDS Desru_1946 NC_015589.1 1964330 1965109 D PFAM: metallophosphoesterase; KEGG: drm:Dred_1917 metallophosphoesterase; metallophosphoesterase 1964330..1965109 Desulfotomaculum ruminis DSM 2154 10738340 YP_004545490.1 CDS Desru_1947 NC_015589.1 1965233 1965493 D PFAM: Stage V sporulation protein S; KEGG: drm:Dred_1916 stage V sporulation protein S; Stage V sporulation protein S 1965233..1965493 Desulfotomaculum ruminis DSM 2154 10738341 YP_004545491.1 CDS Desru_1948 NC_015589.1 1965589 1966530 D KEGG: drm:Dred_1915 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase 1965589..1966530 Desulfotomaculum ruminis DSM 2154 10738342 YP_004545492.1 CDS Desru_1949 NC_015589.1 1966731 1967537 D KEGG: drm:Dred_1914 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 1966731..1967537 Desulfotomaculum ruminis DSM 2154 10738343 YP_004545493.1 CDS Desru_1950 NC_015589.1 1967553 1968719 D PFAM: aminotransferase class I and II; KEGG: drm:Dred_1913 aminotransferase, class I and II; class I and II aminotransferase 1967553..1968719 Desulfotomaculum ruminis DSM 2154 10738344 YP_004545494.1 CDS Desru_1951 NC_015589.1 1968786 1969049 D KEGG: drm:Dred_1912 hypothetical protein; hypothetical protein 1968786..1969049 Desulfotomaculum ruminis DSM 2154 10738345 YP_004545495.1 CDS Desru_1952 NC_015589.1 1969223 1969630 D KEGG: pth:PTH_1310 hypothetical protein; hypothetical protein 1969223..1969630 Desulfotomaculum ruminis DSM 2154 10738346 YP_004545496.1 CDS Desru_1953 NC_015589.1 1969622 1970146 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_1911 metal dependent phosphohydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein complement(1969622..1970146) Desulfotomaculum ruminis DSM 2154 10738347 YP_004545497.1 CDS Desru_1954 NC_015589.1 1970262 1970840 D PFAM: cobalbumin biosynthesis protein; KEGG: dae:Dtox_3094 adenosylcobinamide-phosphateguanylyltransferase; SMART: AAA ATPase; adenosylcobinamide-phosphate guanylyltransferase 1970262..1970840 Desulfotomaculum ruminis DSM 2154 10738348 YP_004545498.1 CDS Desru_1955 NC_015589.1 1970860 1971474 D KEGG: drm:Dred_1908 phosphoglycerate mutase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; alpha-ribazole phosphatase 1970860..1971474 Desulfotomaculum ruminis DSM 2154 10738349 YP_004545499.1 CDS Desru_1956 NC_015589.1 1971626 1971850 D KEGG: drm:Dred_1907 hypothetical protein; hypothetical protein 1971626..1971850 Desulfotomaculum ruminis DSM 2154 10738350 YP_004545500.1 CDS Desru_1957 NC_015589.1 1972051 1972437 D PFAM: transcriptional regulator PadR family protein; KEGG: clj:CLJU_c22780 putative transcriptional regulator; PadR family transcriptional regulator 1972051..1972437 Desulfotomaculum ruminis DSM 2154 10738351 YP_004545501.1 CDS Desru_1958 NC_015589.1 1972634 1974088 D SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: drm:Dred_1906 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 1972634..1974088 Desulfotomaculum ruminis DSM 2154 10738352 YP_004545502.1 CDS Desru_1959 NC_015589.1 1974334 1974984 R KEGG: pth:PTH_1319 hypothetical protein; hypothetical protein complement(1974334..1974984) Desulfotomaculum ruminis DSM 2154 10738353 YP_004545503.1 CDS Desru_1960 NC_015589.1 1975357 1976736 D KEGG: drm:Dred_1905 hypothetical protein; hypothetical protein 1975357..1976736 Desulfotomaculum ruminis DSM 2154 10738354 YP_004545504.1 CDS Desru_1961 NC_015589.1 1976905 1977684 R KEGG: drm:Dred_1904 hypothetical protein; hypothetical protein complement(1976905..1977684) Desulfotomaculum ruminis DSM 2154 10738355 YP_004545505.1 CDS Desru_1962 NC_015589.1 1978143 1978682 D PFAM: NUDIX hydrolase; KEGG: drm:Dred_1901 NUDIX hydrolase; NUDIX hydrolase 1978143..1978682 Desulfotomaculum ruminis DSM 2154 10738356 YP_004545506.1 CDS Desru_1963 NC_015589.1 1978758 1979447 R KEGG: drm:Dred_1900 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; septum site-determining protein MinC complement(1978758..1979447) Desulfotomaculum ruminis DSM 2154 10738357 YP_004545507.1 CDS Desru_1964 NC_015589.1 1979543 1981033 R KEGG: drm:Dred_1899 hypothetical protein; hypothetical protein complement(1979543..1981033) Desulfotomaculum ruminis DSM 2154 10738358 YP_004545508.1 CDS Desru_1966 NC_015589.1 1982674 1983420 D PFAM: glycosyl transferase family 2; KEGG: drm:Dred_1898 glycosyl transferase family protein; family 2 glycosyl transferase 1982674..1983420 Desulfotomaculum ruminis DSM 2154 10738360 YP_004545509.1 CDS Desru_1967 NC_015589.1 1983377 1984156 D KEGG: drm:Dred_1897 glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase 1983377..1984156 Desulfotomaculum ruminis DSM 2154 10738361 YP_004545510.1 CDS Desru_1968 NC_015589.1 1984153 1985145 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: drm:Dred_1896 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1984153..1985145 Desulfotomaculum ruminis DSM 2154 10738362 YP_004545511.1 CDS Desru_1969 NC_015589.1 1985160 1986077 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: drm:Dred_1895 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1985160..1986077 Desulfotomaculum ruminis DSM 2154 10738363 YP_004545512.1 CDS Desru_1970 NC_015589.1 1986198 1987835 D PFAM: AMP-dependent synthetase and ligase; KEGG: chy:CHY_0572 acetyl-coenzyme A synthetase family protein; AMP-dependent synthetase and ligase 1986198..1987835 Desulfotomaculum ruminis DSM 2154 10738364 YP_004545513.1 CDS Desru_1971 NC_015589.1 1987813 1988004 R KEGG: ang:An03g00230 hypothetical protein; hypothetical protein complement(1987813..1988004) Desulfotomaculum ruminis DSM 2154 10738365 YP_004545514.1 CDS Desru_1972 NC_015589.1 1988162 1989772 D PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bbe:BBR47_22570 putative pyruvate dehydrogenase; thiamine pyrophosphate TPP-binding domain-containing protein 1988162..1989772 Desulfotomaculum ruminis DSM 2154 10738366 YP_004545515.1 CDS Desru_1973 NC_015589.1 1989946 1990077 D hypothetical protein 1989946..1990077 Desulfotomaculum ruminis DSM 2154 10738367 YP_004545516.1 CDS Desru_1974 NC_015589.1 1990280 1990528 D PFAM: glutaredoxin; KEGG: fpl:Ferp_1272 glutaredoxin; glutaredoxin 1990280..1990528 Desulfotomaculum ruminis DSM 2154 10738368 YP_004545517.1 CDS Desru_1975 NC_015589.1 1990518 1990919 D KEGG: fpl:Ferp_1273 ferredoxin thioredoxin reductase beta chain; hypothetical protein 1990518..1990919 Desulfotomaculum ruminis DSM 2154 10738369 YP_004545518.1 CDS Desru_1976 NC_015589.1 1990968 1991093 R hypothetical protein complement(1990968..1991093) Desulfotomaculum ruminis DSM 2154 10738370 YP_004545519.1 CDS Desru_1977 NC_015589.1 1991195 1992544 D TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: drm:Dred_1889 (dimethylallyl)adenosine tRNA methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB 1991195..1992544 Desulfotomaculum ruminis DSM 2154 10738371 YP_004545520.1 CDS Desru_1978 NC_015589.1 1992575 1992961 D KEGG: drm:Dred_1888 hypothetical protein; hypothetical protein 1992575..1992961 Desulfotomaculum ruminis DSM 2154 10738372 YP_004545521.1 CDS Desru_1979 NC_015589.1 1993138 1995747 D TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: drm:Dred_1887 DNA mismatch repair protein MutS; SMART: MutS III domain protein; DNA mismatch repair protein MutS domain protein; DNA mismatch repair protein MutS 1993138..1995747 Desulfotomaculum ruminis DSM 2154 10738373 YP_004545522.1 CDS Desru_1980 NC_015589.1 1995885 1997561 D PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: drm:Dred_1886 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 1995885..1997561 Desulfotomaculum ruminis DSM 2154 10738374 YP_004545523.1 CDS Desru_1981 NC_015589.1 1997558 1998913 D PFAM: histone deacetylase superfamily; KEGG: drm:Dred_1885 histone deacetylase superfamily protein; histone deacetylase superfamily protein 1997558..1998913 Desulfotomaculum ruminis DSM 2154 10738375 YP_004545524.1 CDS Desru_1982 NC_015589.1 1998924 2000837 D KEGG: drm:Dred_1884 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; DNA mismatch repair protein MutL 1998924..2000837 Desulfotomaculum ruminis DSM 2154 10738376 YP_004545525.1 CDS Desru_1983 NC_015589.1 2000837 2001640 D PFAM: protein of unknown function DUF548; KEGG: drm:Dred_1883 hypothetical protein; hypothetical protein 2000837..2001640 Desulfotomaculum ruminis DSM 2154 10738377 YP_004545526.1 CDS Desru_1984 NC_015589.1 2001628 2002563 D TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: drm:Dred_1882 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2001628..2002563 Desulfotomaculum ruminis DSM 2154 10738378 YP_004545527.1 CDS Desru_1985 NC_015589.1 2002633 2002875 D KEGG: drm:Dred_1881 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; RNA chaperone Hfq 2002633..2002875 Desulfotomaculum ruminis DSM 2154 10738379 YP_004545528.1 CDS Desru_1986 NC_015589.1 2003032 2003991 D KEGG: drm:Dred_1880 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase 2003032..2003991 Desulfotomaculum ruminis DSM 2154 10738380 YP_004545529.1 CDS Desru_1987 NC_015589.1 2004041 2005285 D PFAM: Aluminium resistance family protein; KEGG: drm:Dred_1879 aluminium resistance family protein; aluminum resistance family protein 2004041..2005285 Desulfotomaculum ruminis DSM 2154 10738381 YP_004545530.1 CDS Desru_1988 NC_015589.1 2005475 2005960 D KEGG: dae:Dtox_2410 sporulation lipoprotein, YhcN/YlaJ family; TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: Sporulation lipoprotein YhcN/YlaJ-like; YhcN/YlaJ family sporulation lipoprotein 2005475..2005960 Desulfotomaculum ruminis DSM 2154 10738382 YP_004545531.1 CDS Desru_1989 NC_015589.1 2006242 2007039 D KEGG: drm:Dred_0594 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 2006242..2007039 Desulfotomaculum ruminis DSM 2154 10738383 YP_004545532.1 CDS Desru_1990 NC_015589.1 2007250 2008629 D KEGG: drm:Dred_1876 hypothetical protein; hypothetical protein 2007250..2008629 Desulfotomaculum ruminis DSM 2154 10738384 YP_004545533.1 CDS Desru_1991 NC_015589.1 2008617 2008940 D KEGG: drm:Dred_1875 hypothetical protein; hypothetical protein 2008617..2008940 Desulfotomaculum ruminis DSM 2154 10738385 YP_004545534.1 CDS Desru_1992 NC_015589.1 2009114 2009521 D KEGG: drm:Dred_1874 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; regulatory protein MerR 2009114..2009521 Desulfotomaculum ruminis DSM 2154 10738386 YP_004545535.1 CDS Desru_1993 NC_015589.1 2009754 2010005 D KEGG: sat:SYN_01170 putative cytoplasmic protein; putative cytoplasmic protein 2009754..2010005 Desulfotomaculum ruminis DSM 2154 10738387 YP_004545536.1 CDS Desru_1994 NC_015589.1 2010069 2010446 D PFAM: protein of unknown function DUF134; KEGG: dhd:Dhaf_1981 protein of unknown function DUF134; hypothetical protein 2010069..2010446 Desulfotomaculum ruminis DSM 2154 10738388 YP_004545537.1 CDS Desru_1995 NC_015589.1 2010449 2010853 D PFAM: nitrogen-fixing NifU domain protein; KEGG: ckr:CKR_3218 hypothetical protein; nitrogen-fixing NifU domain-containing protein 2010449..2010853 Desulfotomaculum ruminis DSM 2154 10738389 YP_004545538.1 CDS Desru_1996 NC_015589.1 2010828 2011196 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: amt:Amet_1464 dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 2010828..2011196 Desulfotomaculum ruminis DSM 2154 10738390 YP_004545539.1 CDS Desru_1997 NC_015589.1 2011198 2012064 D KEGG: dsy:DSY3440 hypothetical protein; hypothetical protein 2011198..2012064 Desulfotomaculum ruminis DSM 2154 10738391 YP_004545540.1 CDS Desru_1998 NC_015589.1 2012036 2012923 D KEGG: dhd:Dhaf_1984 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 2012036..2012923 Desulfotomaculum ruminis DSM 2154 10738392 YP_004545541.1 CDS Desru_1999 NC_015589.1 2013162 2013524 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dhd:Dhaf_1986 dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 2013162..2013524 Desulfotomaculum ruminis DSM 2154 10738393 YP_004545542.1 CDS Desru_2000 NC_015589.1 2013780 2014421 R KEGG: drm:Dred_1873 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; LexA repressor complement(2013780..2014421) Desulfotomaculum ruminis DSM 2154 10738394 YP_004545543.1 CDS Desru_2001 NC_015589.1 2014577 2015944 D TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: pth:PTH_1355 transcriptional regulator; SMART: AAA ATPase; PAS domain containing protein; PAS sensor protein 2014577..2015944 Desulfotomaculum ruminis DSM 2154 10738395 YP_004545544.1 CDS Desru_2002 NC_015589.1 2016156 2017055 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: drm:Dred_1872 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; hydro-lyase Fe-S type tartrate/fumarate subfamily subunit alpha 2016156..2017055 Desulfotomaculum ruminis DSM 2154 10738396 YP_004545545.1 CDS Desru_2003 NC_015589.1 2017071 2017625 D KEGG: drm:Dred_1871 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; hydro-lyase Fe-S type tartrate/fumarate subfamily subunit beta 2017071..2017625 Desulfotomaculum ruminis DSM 2154 10738397 YP_004545546.1 CDS Desru_2004 NC_015589.1 2017735 2019282 D PFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: hmo:HM1_2773 phosphoenolpyruvate carboxykinase; phosphoenolpyruvate carboxykinase 2017735..2019282 Desulfotomaculum ruminis DSM 2154 10738398 YP_004545547.1 CDS Desru_2005 NC_015589.1 2019370 2020017 D TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: drm:Dred_1870 succinate dehydrogenase/fumarate reductase cytochrome b subunit; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit b558 family 2019370..2020017 Desulfotomaculum ruminis DSM 2154 10738399 YP_004545548.1 CDS Desru_2006 NC_015589.1 2020035 2021792 D TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: drm:Dred_1869 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; succinate dehydrogenase or fumarate reductase flavoprotein subunit 2020035..2021792 Desulfotomaculum ruminis DSM 2154 10738400 YP_004545549.1 CDS Desru_2007 NC_015589.1 2021789 2022538 D TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: drm:Dred_1868 succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein 2021789..2022538 Desulfotomaculum ruminis DSM 2154 10738401 YP_004545550.1 CDS Desru_2008 NC_015589.1 2022595 2023524 D KEGG: drm:Dred_1867 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase NAD-dependent 2022595..2023524 Desulfotomaculum ruminis DSM 2154 10738402 YP_004545551.1 CDS Desru_2009 NC_015589.1 2023682 2024389 D KEGG: hmo:HM1_2078 transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 2023682..2024389 Desulfotomaculum ruminis DSM 2154 10738403 YP_004545552.1 CDS Desru_2010 NC_015589.1 2024625 2025755 D PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1866 hypothetical protein; hypothetical protein 2024625..2025755 Desulfotomaculum ruminis DSM 2154 10738404 YP_004545553.1 CDS Desru_2011 NC_015589.1 2025771 2025911 D hypothetical protein 2025771..2025911 Desulfotomaculum ruminis DSM 2154 10738405 YP_004545554.1 CDS Desru_2012 NC_015589.1 2026493 2027302 D KEGG: dae:Dtox_2758 hypothetical protein; hypothetical protein 2026493..2027302 Desulfotomaculum ruminis DSM 2154 10738406 YP_004545555.1 CDS Desru_2013 NC_015589.1 2027549 2028835 R PFAM: cell cycle protein; KEGG: lmo:lmo0421 hypothetical protein; cell cycle protein complement(2027549..2028835) Desulfotomaculum ruminis DSM 2154 10738407 YP_004545556.1 CDS Desru_2014 NC_015589.1 2028835 2029266 R PFAM: transcriptional regulator PadR family protein; KEGG: bcz:BCZK0943 lineage-specific thermal regulator protein; PadR family transcriptional regulator complement(2028835..2029266) Desulfotomaculum ruminis DSM 2154 10738408 YP_004545557.1 CDS Desru_2015 NC_015589.1 2029269 2029814 R KEGG: bcr:BCAH187_A1202 RNA polymerase factor sigma C; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 family RNA polymerase sigma factor complement(2029269..2029814) Desulfotomaculum ruminis DSM 2154 10738409 YP_004545558.1 CDS Desru_2018 NC_015589.1 2031077 2032561 R KEGG: drm:Dred_1865 hypothetical protein; hypothetical protein complement(2031077..2032561) Desulfotomaculum ruminis DSM 2154 10738412 YP_004545559.1 CDS Desru_2019 NC_015589.1 2032592 2033206 R KEGG: drm:Dred_1864 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; response regulator receiver complement(2032592..2033206) Desulfotomaculum ruminis DSM 2154 10738413 YP_004545560.1 CDS Desru_2020 NC_015589.1 2033175 2034806 R KEGG: drm:Dred_1863 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS sensor protein complement(2033175..2034806) Desulfotomaculum ruminis DSM 2154 10738414 YP_004545561.1 CDS Desru_2021 NC_015589.1 2035164 2035634 D KEGG: drm:Dred_1862 hypothetical protein; hypothetical protein 2035164..2035634 Desulfotomaculum ruminis DSM 2154 10738415 YP_004545562.1 CDS Desru_2022 NC_015589.1 2035720 2036793 D PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1861 hypothetical protein; hypothetical protein 2035720..2036793 Desulfotomaculum ruminis DSM 2154 10738416 YP_004545563.1 CDS Desru_2023 NC_015589.1 2036825 2036950 D hypothetical protein 2036825..2036950 Desulfotomaculum ruminis DSM 2154 10738417 YP_004545564.1 CDS Desru_2024 NC_015589.1 2037029 2037472 D PFAM: UspA domain-containing protein; KEGG: drm:Dred_1860 UspA domain-containing protein; UspA domain-containing protein 2037029..2037472 Desulfotomaculum ruminis DSM 2154 10738418 YP_004545565.1 CDS Desru_2025 NC_015589.1 2037590 2037823 D hypothetical protein 2037590..2037823 Desulfotomaculum ruminis DSM 2154 10738419 YP_004545566.1 CDS Desru_2026 NC_015589.1 2037968 2039080 D KEGG: pjd:Pjdr2_1959 membrane protein AbrB duplication; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; membrane protein AbrB 2037968..2039080 Desulfotomaculum ruminis DSM 2154 10738420 YP_004545567.1 CDS Desru_2027 NC_015589.1 2039157 2039612 D KEGG: drm:Dred_1484 hypothetical protein; hypothetical protein 2039157..2039612 Desulfotomaculum ruminis DSM 2154 10738421 YP_004545568.1 CDS Desru_2028 NC_015589.1 2039634 2040095 R KEGG: drm:Dred_1513 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein complement(2039634..2040095) Desulfotomaculum ruminis DSM 2154 10738422 YP_004545569.1 CDS Desru_2029 NC_015589.1 2040110 2040382 R KEGG: drm:Dred_1993 hypothetical protein; hypothetical protein complement(2040110..2040382) Desulfotomaculum ruminis DSM 2154 10738423 YP_004545570.1 CDS Desru_2030 NC_015589.1 2040453 2041535 R PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1512 hypothetical protein; hypothetical protein complement(2040453..2041535) Desulfotomaculum ruminis DSM 2154 10738424 YP_004545571.1 CDS Desru_2031 NC_015589.1 2041551 2041781 R KEGG: tfu:Tfu_1354 transmembrane transport protein; transmembrane transport protein complement(2041551..2041781) Desulfotomaculum ruminis DSM 2154 10738425 YP_004545572.1 CDS Desru_2032 NC_015589.1 2042113 2043672 D KEGG: drm:Dred_1511 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 2042113..2043672 Desulfotomaculum ruminis DSM 2154 10738426 YP_004545573.1 CDS Desru_2033 NC_015589.1 2043647 2044993 D KEGG: drm:Dred_1510 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; sigma-54 factor interaction domain-containing protein 2043647..2044993 Desulfotomaculum ruminis DSM 2154 10738427 YP_004545574.1 CDS Desru_2034 NC_015589.1 2045121 2046953 R PFAM: protein of unknown function DUF342; KEGG: drm:Dred_1859 hypothetical protein; hypothetical protein complement(2045121..2046953) Desulfotomaculum ruminis DSM 2154 10738428 YP_004545575.1 CDS Desru_2035 NC_015589.1 2047277 2048224 R KEGG: pth:PTH_0674 molybdate-binding domain-containing protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; excisionase family DNA binding domain-containing protein complement(2047277..2048224) Desulfotomaculum ruminis DSM 2154 10738429 YP_004545576.1 CDS Desru_2036 NC_015589.1 2048501 2049328 D PFAM: extracellular solute-binding protein family 1; KEGG: dae:Dtox_3447 molybdenum ABC transporter, periplasmic molybdate-binding protein; family 1 extracellular solute-binding protein 2048501..2049328 Desulfotomaculum ruminis DSM 2154 10738430 YP_004545577.1 CDS Desru_2037 NC_015589.1 2049328 2050143 D KEGG: dae:Dtox_3448 NifC-like ABC-type porter; TIGRFAM: NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component; NifC-like ABC-type porter 2049328..2050143 Desulfotomaculum ruminis DSM 2154 10738431 YP_004545578.1 CDS Desru_2038 NC_015589.1 2050140 2051237 D KEGG: dae:Dtox_3449 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter-like protein 2050140..2051237 Desulfotomaculum ruminis DSM 2154 10738432 YP_004545579.1 CDS Desru_2039 NC_015589.1 2051265 2052020 D KEGG: dae:Dtox_3450 hypothetical protein; hypothetical protein 2051265..2052020 Desulfotomaculum ruminis DSM 2154 10738433 YP_004545580.1 CDS Desru_2040 NC_015589.1 2052513 2052875 D PFAM: small multidrug resistance protein; KEGG: bcb:BCB4264_A4914 SugE protein; small multidrug resistance protein 2052513..2052875 Desulfotomaculum ruminis DSM 2154 10738434 YP_004545581.1 CDS Desru_2041 NC_015589.1 2052872 2053192 D PFAM: small multidrug resistance protein; KEGG: bcg:BCG9842_B0325 SugE protein; small multidrug resistance protein 2052872..2053192 Desulfotomaculum ruminis DSM 2154 10738435 YP_004545582.1 CDS Desru_2042 NC_015589.1 2053508 2054620 D PFAM: Glycosyl transferase, family 4, conserved region; KEGG: dae:Dtox_4113 glycosyl transferase family 4; glycosyl transferase family protein 2053508..2054620 Desulfotomaculum ruminis DSM 2154 10738436 YP_004545583.1 CDS Desru_2043 NC_015589.1 2055204 2056772 R KEGG: dhd:Dhaf_0941 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein complement(2055204..2056772) Desulfotomaculum ruminis DSM 2154 10738437 YP_004545584.1 CDS Desru_2044 NC_015589.1 2056769 2057479 R KEGG: dhd:Dhaf_0940 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(2056769..2057479) Desulfotomaculum ruminis DSM 2154 10738438 YP_004545585.1 CDS Desru_2045 NC_015589.1 2058223 2058684 D KEGG: dhd:Dhaf_0935 Mur ligase middle domain protein; Mur ligase middle domain-containing protein 2058223..2058684 Desulfotomaculum ruminis DSM 2154 10738439 YP_004545586.1 CDS Desru_2047 NC_015589.1 2059173 2059904 R PFAM: protein of unknown function DUF867; KEGG: dsy:DSY4392 hypothetical protein; hypothetical protein complement(2059173..2059904) Desulfotomaculum ruminis DSM 2154 10738441 YP_004545587.1 CDS Desru_2048 NC_015589.1 2060098 2062101 R PFAM: NLP/P60 protein; KEGG: bpf:BpOF4_12040 C40 family peptidase; NLP/P60 protein complement(2060098..2062101) Desulfotomaculum ruminis DSM 2154 10738442 YP_004545588.1 CDS Desru_2049 NC_015589.1 2062519 2062944 R KEGG: cce:Ccel_1657 hypothetical protein; hypothetical protein complement(2062519..2062944) Desulfotomaculum ruminis DSM 2154 10738443 YP_004545589.1 CDS Desru_2050 NC_015589.1 2063391 2063546 D hypothetical protein 2063391..2063546 Desulfotomaculum ruminis DSM 2154 10738444 YP_004545590.1 CDS Desru_2051 NC_015589.1 2063518 2063955 D KEGG: aar:Acear_0658 hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase maturation protease 2063518..2063955 Desulfotomaculum ruminis DSM 2154 10738445 YP_004545591.1 CDS Desru_2052 NC_015589.1 2064032 2064412 D KEGG: bmr:BMI_I78 putative amino acid efflux protein, LysE family; hypothetical protein 2064032..2064412 Desulfotomaculum ruminis DSM 2154 10738446 YP_004545592.1 CDS Desru_2053 NC_015589.1 2064463 2065722 R PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_1904 major facilitator transporter; major facilitator superfamily protein complement(2064463..2065722) Desulfotomaculum ruminis DSM 2154 10738447 YP_004545593.1 CDS Desru_2054 NC_015589.1 2065829 2068450 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: ckr:CKR_3312 phosphoenolpyruvate synthase; pyruvate phosphate dikinase PEP/pyruvate-binding protein complement(2065829..2068450) Desulfotomaculum ruminis DSM 2154 10738448 YP_004545594.1 CDS Desru_2055 NC_015589.1 2068505 2069101 R PFAM: regulatory protein TetR; KEGG: cbe:Cbei_2064 TetR family transcriptional regulator; regulatory protein TetR complement(2068505..2069101) Desulfotomaculum ruminis DSM 2154 10738449 YP_004545595.1 CDS Desru_2056 NC_015589.1 2069437 2070591 D KEGG: dsy:DSY1379 hypothetical protein; hypothetical protein 2069437..2070591 Desulfotomaculum ruminis DSM 2154 10738450 YP_004545596.1 CDS Desru_2057 NC_015589.1 2070716 2071966 R KEGG: bwe:BcerKBAB4_1770 hypothetical protein; hypothetical protein complement(2070716..2071966) Desulfotomaculum ruminis DSM 2154 10738451 YP_004545597.1 CDS Desru_2058 NC_015589.1 2072010 2072231 R KEGG: bss:BSUW23_10025 putative transcriptional regualtor; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2072010..2072231) Desulfotomaculum ruminis DSM 2154 10738452 YP_004545598.1 CDS Desru_2059 NC_015589.1 2072242 2072715 R KEGG: cbe:Cbei_3032 uncharacterized membrane protein; hypothetical protein complement(2072242..2072715) Desulfotomaculum ruminis DSM 2154 10738453 YP_004545599.1 CDS Desru_2061 NC_015589.1 2073624 2074730 R KEGG: dae:Dtox_1334 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(2073624..2074730) Desulfotomaculum ruminis DSM 2154 10738455 YP_004545600.1 CDS Desru_2062 NC_015589.1 2075069 2075398 D KEGG: pcu:pc1189 cytochrome o ubiquinol oxidase chain II CyoA; hypothetical protein 2075069..2075398 Desulfotomaculum ruminis DSM 2154 10738456 YP_004545601.1 CDS Desru_2063 NC_015589.1 2075458 2076621 R KEGG: dae:Dtox_2812 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; Agmatine deiminase complement(2075458..2076621) Desulfotomaculum ruminis DSM 2154 10738457 YP_004545602.1 CDS Desru_2064 NC_015589.1 2076790 2077392 R PFAM: Methyltransferase type 11; KEGG: dae:Dtox_2159 methyltransferase type 12; type 11 methyltransferase complement(2076790..2077392) Desulfotomaculum ruminis DSM 2154 10738458 YP_004545603.1 CDS Desru_2065 NC_015589.1 2077736 2078527 R PFAM: SNARE associated Golgi protein; KEGG: ele:Elen_2985 SNARE associated Golgi protein; hypothetical protein complement(2077736..2078527) Desulfotomaculum ruminis DSM 2154 10738459 YP_004545604.1 CDS Desru_2066 NC_015589.1 2078899 2079228 R KEGG: lsp:Bsph_4021 hypothetical protein; hypothetical protein complement(2078899..2079228) Desulfotomaculum ruminis DSM 2154 10738460 YP_004545605.1 CDS Desru_2067 NC_015589.1 2079366 2080136 R KEGG: drm:Dred_3262 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; response regulator receiver complement(2079366..2080136) Desulfotomaculum ruminis DSM 2154 10738461 YP_004545606.1 CDS Desru_2068 NC_015589.1 2080138 2081331 R PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: drm:Dred_3263 histidine kinase internal region; histidine kinase internal region complement(2080138..2081331) Desulfotomaculum ruminis DSM 2154 10738462 YP_004545607.1 CDS Desru_2069 NC_015589.1 2081667 2081813 R hypothetical protein complement(2081667..2081813) Desulfotomaculum ruminis DSM 2154 10738463 YP_004545608.1 CDS Desru_2070 NC_015589.1 2081956 2082315 R manually curated; KEGG: cdl:CDR20291_1756 rna polymerase, sigma-24 subunit, ecf subfamily; hypothetical protein complement(2081956..2082315) Desulfotomaculum ruminis DSM 2154 10738464 YP_004545609.1 CDS Desru_2071 NC_015589.1 2082569 2083312 R PFAM: ABC-2 type transporter; KEGG: dhd:Dhaf_3151 ABC-2 type transporter; ABC transporter complement(2082569..2083312) Desulfotomaculum ruminis DSM 2154 10738465 YP_004545610.1 CDS Desru_2072 NC_015589.1 2083299 2084030 R KEGG: dhd:Dhaf_3150 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2083299..2084030) Desulfotomaculum ruminis DSM 2154 10738466 YP_004545611.1 CDS Desru_2073 NC_015589.1 2084089 2084850 R KEGG: dhd:Dhaf_3149 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; regulatory protein MerR complement(2084089..2084850) Desulfotomaculum ruminis DSM 2154 10738467 YP_004545612.1 CDS Desru_2074 NC_015589.1 2085171 2085461 R PFAM: microcompartments protein; KEGG: dhd:Dhaf_4890 microcompartments protein; microcompartments protein complement(2085171..2085461) Desulfotomaculum ruminis DSM 2154 10738468 YP_004545613.1 CDS Desru_2075 NC_015589.1 2085483 2086127 R PFAM: Propanediol utilization protein; KEGG: drm:Dred_3265 propanediol utilization protein; propanediol utilization protein complement(2085483..2086127) Desulfotomaculum ruminis DSM 2154 10738469 YP_004545614.1 CDS Desru_2076 NC_015589.1 2086130 2087605 R KEGG: drm:Dred_3266 acetaldehyde dehydrogenase (acetylating); TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase; acetaldehyde dehydrogenase complement(2086130..2087605) Desulfotomaculum ruminis DSM 2154 10738470 YP_004545615.1 CDS Desru_2077 NC_015589.1 2087676 2088284 R PFAM: microcompartments protein; KEGG: drm:Dred_3267 microcompartments protein; microcompartments protein complement(2087676..2088284) Desulfotomaculum ruminis DSM 2154 10738471 YP_004545616.1 CDS Desru_2078 NC_015589.1 2088296 2088970 R PFAM: Ethanolamine utilisation EutQ family protein; KEGG: drm:Dred_3268 ethanolamine utilisation EutQ family protein; ethanolamine utilization EutQ family protein complement(2088296..2088970) Desulfotomaculum ruminis DSM 2154 10738472 YP_004545617.1 CDS Desru_2079 NC_015589.1 2089014 2089562 R PFAM: microcompartments protein; KEGG: drm:Dred_3269 microcompartments protein; microcompartments protein complement(2089014..2089562) Desulfotomaculum ruminis DSM 2154 10738473 YP_004545618.1 CDS Desru_2080 NC_015589.1 2089555 2090889 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; KEGG: drm:Dred_3270 respiratory-chain NADH dehydrogenase domain-containing protein; respiratory-chain NADH dehydrogenase domain 51 kDa subunit complement(2089555..2090889) Desulfotomaculum ruminis DSM 2154 10738474 YP_004545619.1 CDS Desru_2081 NC_015589.1 2090911 2091171 R PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: drm:Dred_3271 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; ethanolamine utilization protein EutN/carboxysome structural protein Ccml complement(2090911..2091171) Desulfotomaculum ruminis DSM 2154 10738475 YP_004545620.1 CDS Desru_2082 NC_015589.1 2091168 2091467 R PFAM: microcompartments protein; KEGG: drm:Dred_3272 microcompartments protein; microcompartments protein complement(2091168..2091467) Desulfotomaculum ruminis DSM 2154 10738476 YP_004545621.1 CDS Desru_2083 NC_015589.1 2091500 2092342 R TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: drm:Dred_3273 ethanolamine utilization protein EutJ family protein; ethanolamine utilization protein EutJ family protein complement(2091500..2092342) Desulfotomaculum ruminis DSM 2154 10738477 YP_004545622.1 CDS Desru_2084 NC_015589.1 2092339 2093001 R KEGG: drm:Dred_3274 hypothetical protein; hypothetical protein complement(2092339..2093001) Desulfotomaculum ruminis DSM 2154 10738478 YP_004545623.1 CDS Desru_2085 NC_015589.1 2093098 2093553 R KEGG: drm:Dred_3275 hypothetical protein; hypothetical protein complement(2093098..2093553) Desulfotomaculum ruminis DSM 2154 10738479 YP_004545624.1 CDS Desru_2086 NC_015589.1 2093550 2093903 R PFAM: microcompartments protein; KEGG: drm:Dred_3276 microcompartments protein; microcompartments protein complement(2093550..2093903) Desulfotomaculum ruminis DSM 2154 10738480 YP_004545625.1 CDS Desru_2087 NC_015589.1 2093930 2095003 R TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: drm:Dred_3277 glycyl-radical activating family protein; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family complement(2093930..2095003) Desulfotomaculum ruminis DSM 2154 10738481 YP_004545626.1 CDS Desru_2088 NC_015589.1 2095045 2095332 R KEGG: pca:Pcar_0942 hypothetical protein; hypothetical protein complement(2095045..2095332) Desulfotomaculum ruminis DSM 2154 10738482 YP_004545627.1 CDS Desru_2089 NC_015589.1 2095336 2096346 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: pca:Pcar_0941 hypothetical protein; hypothetical protein complement(2095336..2096346) Desulfotomaculum ruminis DSM 2154 10738483 YP_004545628.1 CDS Desru_2090 NC_015589.1 2096428 2098971 R PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; KEGG: drm:Dred_3278 formate C-acetyltransferase; pyruvate formate-lyase PFL complement(2096428..2098971) Desulfotomaculum ruminis DSM 2154 10738484 YP_004545629.1 CDS Desru_2091 NC_015589.1 2099025 2100161 R PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_3279 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2099025..2100161) Desulfotomaculum ruminis DSM 2154 10738485 YP_004545630.1 CDS Desru_2092 NC_015589.1 2100175 2101638 R KEGG: drm:Dred_3280 acetaldehyde dehydrogenase (acetylating); TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase; acetaldehyde dehydrogenase complement(2100175..2101638) Desulfotomaculum ruminis DSM 2154 10738486 YP_004545631.1 CDS Desru_2093 NC_015589.1 2101694 2101993 R PFAM: microcompartments protein; KEGG: dhd:Dhaf_4907 microcompartments protein; microcompartments protein complement(2101694..2101993) Desulfotomaculum ruminis DSM 2154 10738487 YP_004545632.1 CDS Desru_2094 NC_015589.1 2102024 2102323 R PFAM: microcompartments protein; KEGG: dhd:Dhaf_4908 microcompartments protein; microcompartments protein complement(2102024..2102323) Desulfotomaculum ruminis DSM 2154 10738488 YP_004545633.1 CDS Desru_2095 NC_015589.1 2102757 2103671 D PFAM: Choline/ethanolamine kinase; KEGG: drm:Dred_3288 choline/ethanolamine kinase; choline/ethanolamine kinase 2102757..2103671 Desulfotomaculum ruminis DSM 2154 10738489 YP_004545634.1 CDS Desru_2096 NC_015589.1 2104064 2105275 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dhd:Dhaf_0851 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2104064..2105275) Desulfotomaculum ruminis DSM 2154 10738490 YP_004545635.1 CDS Desru_2097 NC_015589.1 2105301 2105627 R PFAM: glutaredoxin 2; KEGG: dhd:Dhaf_0626 thioredoxin domain protein; glutaredoxin complement(2105301..2105627) Desulfotomaculum ruminis DSM 2154 10738491 YP_004545636.1 CDS Desru_2098 NC_015589.1 2105938 2107986 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dhd:Dhaf_4910 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(2105938..2107986) Desulfotomaculum ruminis DSM 2154 10738492 YP_004545637.1 CDS Desru_2099 NC_015589.1 2108312 2108767 R KEGG: cci:CC1G_09323 2-methylcitrate dehydratase; hypothetical protein complement(2108312..2108767) Desulfotomaculum ruminis DSM 2154 10738493 YP_004545638.1 CDS Desru_2100 NC_015589.1 2108924 2110147 R KEGG: cth:Cthe_0056 Ig-like, group 2; hypothetical protein complement(2108924..2110147) Desulfotomaculum ruminis DSM 2154 10738494 YP_004545639.1 CDS Desru_2101 NC_015589.1 2110255 2111553 R KEGG: swo:Swol_0509 hypothetical protein; hypothetical protein complement(2110255..2111553) Desulfotomaculum ruminis DSM 2154 10738495 YP_004545640.1 CDS Desru_2102 NC_015589.1 2111558 2112355 R KEGG: swo:Swol_0508 hypothetical protein; hypothetical protein complement(2111558..2112355) Desulfotomaculum ruminis DSM 2154 10738496 YP_004545641.1 CDS Desru_2103 NC_015589.1 2112540 2113751 R KEGG: abu:Abu_0346 cytochrome c biogenesis protein; hypothetical protein complement(2112540..2113751) Desulfotomaculum ruminis DSM 2154 10738497 YP_004545642.1 CDS Desru_2105 NC_015589.1 2115658 2115981 R KEGG: dmo:Dmoj_GI12949 GI12949 gene product from transcript GI12949-RA; hypothetical protein complement(2115658..2115981) Desulfotomaculum ruminis DSM 2154 10738499 YP_004545643.1 CDS Desru_2106 NC_015589.1 2116259 2116996 D KEGG: dsy:DSY0824 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; RNA polymerase sigma-I factor 2116259..2116996 Desulfotomaculum ruminis DSM 2154 10738500 YP_004545644.1 CDS Desru_2107 NC_015589.1 2116993 2117895 D KEGG: dae:Dtox_1585 hypothetical protein; hypothetical protein 2116993..2117895 Desulfotomaculum ruminis DSM 2154 10738501 YP_004545645.1 CDS Desru_2108 NC_015589.1 2118055 2118744 R KEGG: dsy:DSY3578 hypothetical protein; hypothetical protein complement(2118055..2118744) Desulfotomaculum ruminis DSM 2154 10738502 YP_004545646.1 CDS Desru_2109 NC_015589.1 2118991 2119707 R PFAM: metallophosphoesterase; KEGG: drm:Dred_0560 phosphodiesterase; metallophosphoesterase complement(2118991..2119707) Desulfotomaculum ruminis DSM 2154 10738503 YP_004545647.1 CDS Desru_2110 NC_015589.1 2119893 2120222 D KEGG: swo:Swol_0936 regulator of arsenical resistance; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 2119893..2120222 Desulfotomaculum ruminis DSM 2154 10738504 YP_004545648.1 CDS Desru_2111 NC_015589.1 2120262 2120624 D PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: swo:Swol_0937 arsenical resistance operon trans-acting repressor; arsenical resistance operon trans-acting repressor ArsD 2120262..2120624 Desulfotomaculum ruminis DSM 2154 10738505 YP_004545649.1 CDS Desru_2112 NC_015589.1 2120635 2122398 D KEGG: swo:Swol_0938 arsenite-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; arsenite-activated ATPase ArsA 2120635..2122398 Desulfotomaculum ruminis DSM 2154 10738506 YP_004545650.1 CDS Desru_2113 NC_015589.1 2122443 2123495 D KEGG: drm:Dred_0558 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 2122443..2123495 Desulfotomaculum ruminis DSM 2154 10738507 YP_004545651.1 CDS Desru_2114 NC_015589.1 2123700 2125154 D PFAM: amino acid permease-associated region; KEGG: dae:Dtox_2802 amino acid permease-associated region; amino acid permease-associated protein 2123700..2125154 Desulfotomaculum ruminis DSM 2154 10738508 YP_004545652.1 CDS Desru_2115 NC_015589.1 2125207 2126598 R KEGG: swo:Swol_0313 hypothetical protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(2125207..2126598) Desulfotomaculum ruminis DSM 2154 10738509 YP_004545653.1 CDS Desru_2116 NC_015589.1 2126615 2127061 R KEGG: dhd:Dhaf_2650 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(2126615..2127061) Desulfotomaculum ruminis DSM 2154 10738510 YP_004545654.1 CDS Desru_2117 NC_015589.1 2127213 2129051 R KEGG: drm:Dred_1181 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein complement(2127213..2129051) Desulfotomaculum ruminis DSM 2154 10738511 YP_004545655.1 CDS Desru_2118 NC_015589.1 2129298 2130086 R KEGG: hvo:HVO_A0377 hydantoin racemase, putative; PFAM: Asp/Glu/hydantoin racemase; hydantoin racemase complement(2129298..2130086) Desulfotomaculum ruminis DSM 2154 10738512 YP_004545656.1 CDS Desru_2119 NC_015589.1 2130108 2131097 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1566 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2130108..2131097) Desulfotomaculum ruminis DSM 2154 10738513 YP_004545657.1 CDS Desru_2120 NC_015589.1 2131110 2132075 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1565 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2131110..2132075) Desulfotomaculum ruminis DSM 2154 10738514 YP_004545658.1 CDS Desru_2121 NC_015589.1 2132068 2132985 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_1564 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2132068..2132985) Desulfotomaculum ruminis DSM 2154 10738515 YP_004545659.1 CDS Desru_2122 NC_015589.1 2132985 2134004 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_1563 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2132985..2134004) Desulfotomaculum ruminis DSM 2154 10738516 YP_004545660.1 CDS Desru_2123 NC_015589.1 2134106 2135800 R PFAM: extracellular solute-binding protein family 5; KEGG: drm:Dred_1562 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(2134106..2135800) Desulfotomaculum ruminis DSM 2154 10738517 YP_004545661.1 CDS Desru_2124 NC_015589.1 2135797 2136891 R PFAM: peptidase M24; creatinase; KEGG: aac:Aaci_1001 peptidase M24; peptidase M24 complement(2135797..2136891) Desulfotomaculum ruminis DSM 2154 10738518 YP_004545662.1 CDS Desru_2125 NC_015589.1 2136947 2137270 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: drm:Dred_1561 cupin 2 domain-containing protein; cupin complement(2136947..2137270) Desulfotomaculum ruminis DSM 2154 10738519 YP_004545663.1 CDS Desru_2126 NC_015589.1 2137251 2139020 R KEGG: drm:Dred_1560 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; 5-oxoprolinase complement(2137251..2139020) Desulfotomaculum ruminis DSM 2154 10738520 YP_004545664.1 CDS Desru_2127 NC_015589.1 2139023 2141065 R KEGG: drm:Dred_1559 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; 5-oxoprolinase complement(2139023..2141065) Desulfotomaculum ruminis DSM 2154 10738521 YP_004545665.1 CDS Desru_2128 NC_015589.1 2141109 2141651 R KEGG: gka:GK2895 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; cupin complement(2141109..2141651) Desulfotomaculum ruminis DSM 2154 10738522 YP_004545666.1 CDS Desru_2129 NC_015589.1 2141886 2142500 R PFAM: Uncharacterised conserved protein UCP020606; KEGG: mmb:Mmol_1707 hypothetical protein; hypothetical protein complement(2141886..2142500) Desulfotomaculum ruminis DSM 2154 10738523 YP_004545667.1 CDS Desru_2130 NC_015589.1 2142539 2143051 R KEGG: drm:Dred_1829 hypothetical protein; hypothetical protein complement(2142539..2143051) Desulfotomaculum ruminis DSM 2154 10738524 YP_004545668.1 CDS Desru_2131 NC_015589.1 2143041 2144138 R PFAM: Protein of unknown function DUF2157, membrane; KEGG: drm:Dred_1829 hypothetical protein; hypothetical protein complement(2143041..2144138) Desulfotomaculum ruminis DSM 2154 10738525 YP_004545669.1 CDS Desru_2132 NC_015589.1 2144170 2146752 R KEGG: efa:EF1938 cation transporter E1-E2 family ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase complement(2144170..2146752) Desulfotomaculum ruminis DSM 2154 10738526 YP_004545670.1 CDS Desru_2133 NC_015589.1 2147056 2148636 R KEGG: dae:Dtox_3366 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; CHASE3 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein complement(2147056..2148636) Desulfotomaculum ruminis DSM 2154 10738527 YP_004545671.1 CDS Desru_2134 NC_015589.1 2148797 2149009 R KEGG: cac:CA_C3639 CRO repressor-like DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2148797..2149009) Desulfotomaculum ruminis DSM 2154 10738528 YP_004545672.1 CDS Desru_2135 NC_015589.1 2149340 2149735 D KEGG: cdf:CD1379 putative phage regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2149340..2149735 Desulfotomaculum ruminis DSM 2154 10738529 YP_004545673.1 CDS Desru_2136 NC_015589.1 2149881 2150795 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: gwc:GWCH70_1374 protein of unknown function DUF6 transmembrane; hypothetical protein complement(2149881..2150795) Desulfotomaculum ruminis DSM 2154 10738530 YP_004545674.1 CDS Desru_2137 NC_015589.1 2150915 2152201 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mta:Moth_2307 hypothetical protein; hypothetical protein complement(2150915..2152201) Desulfotomaculum ruminis DSM 2154 10738531 YP_004545675.1 CDS Desru_2138 NC_015589.1 2152204 2153595 R PFAM: FAD linked oxidase domain protein; KEGG: gtn:GTNG_0371 glycolate oxidase subunit; FAD linked oxidase domain-containing protein complement(2152204..2153595) Desulfotomaculum ruminis DSM 2154 10738532 YP_004545676.1 CDS Desru_2139 NC_015589.1 2153877 2154776 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pjd:Pjdr2_1915 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2153877..2154776) Desulfotomaculum ruminis DSM 2154 10738533 YP_004545677.1 CDS Desru_2140 NC_015589.1 2154912 2155349 R KEGG: slp:Slip_1884 P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein; P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein complement(2154912..2155349) Desulfotomaculum ruminis DSM 2154 10738534 YP_004545678.1 CDS Desru_2141 NC_015589.1 2155477 2156424 R PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: dhd:Dhaf_3999 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein complement(2155477..2156424) Desulfotomaculum ruminis DSM 2154 10738535 YP_004545679.1 CDS Desru_2142 NC_015589.1 2156452 2157360 R TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: drm:Dred_2966 glycyl-radical activating family protein; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family complement(2156452..2157360) Desulfotomaculum ruminis DSM 2154 10738536 YP_004545680.1 CDS Desru_2143 NC_015589.1 2157372 2159741 R TIGRFAM: pyruvate formate-lyase; KEGG: aoe:Clos_2688 pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase complement(2157372..2159741) Desulfotomaculum ruminis DSM 2154 10738537 YP_004545681.1 CDS Desru_2144 NC_015589.1 2159746 2160429 R KEGG: rxy:Rxyl_2260 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2159746..2160429) Desulfotomaculum ruminis DSM 2154 10738538 YP_004545682.1 CDS Desru_2145 NC_015589.1 2160706 2161764 D KEGG: dae:Dtox_3828 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 2160706..2161764 Desulfotomaculum ruminis DSM 2154 10738539 YP_004545683.1 CDS Desru_2146 NC_015589.1 2161853 2162917 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: adg:Adeg_1644 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein complement(2161853..2162917) Desulfotomaculum ruminis DSM 2154 10738540 YP_004545684.1 CDS Desru_2148 NC_015589.1 2164743 2165279 D PFAM: DSBA oxidoreductase; KEGG: drm:Dred_2656 polyketide biosynthesis dithiol-disulfide isomerase-like protein; DSBA oxidoreductase 2164743..2165279 Desulfotomaculum ruminis DSM 2154 10738542 YP_004545685.1 CDS Desru_2149 NC_015589.1 2165444 2166469 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: drm:Dred_0132 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase complement(2165444..2166469) Desulfotomaculum ruminis DSM 2154 10738543 YP_004545686.1 CDS Desru_2150 NC_015589.1 2166708 2167289 R PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: drm:Dred_0130 glycerol-3-phosphate responsive antiterminator; glycerol-3-phosphate responsive antiterminator complement(2166708..2167289) Desulfotomaculum ruminis DSM 2154 10738544 YP_004545687.1 CDS Desru_2151 NC_015589.1 2167546 2168040 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cac:CA_C3602 HD superfamily hydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein complement(2167546..2168040) Desulfotomaculum ruminis DSM 2154 10738545 YP_004545688.1 CDS Desru_2152 NC_015589.1 2168380 2169426 D PFAM: permease; KEGG: dae:Dtox_0336 permease; permease 2168380..2169426 Desulfotomaculum ruminis DSM 2154 10738546 YP_004545689.1 CDS Desru_2153 NC_015589.1 2169423 2170262 D PFAM: protein of unknown function DUF1980; KEGG: dae:Dtox_0337 protein of unknown function DUF1980; hypothetical protein 2169423..2170262 Desulfotomaculum ruminis DSM 2154 10738547 YP_004545690.1 CDS Desru_2154 NC_015589.1 2170309 2170935 D KEGG: dae:Dtox_0339 hypothetical protein; hypothetical protein 2170309..2170935 Desulfotomaculum ruminis DSM 2154 10738548 YP_004545691.1 CDS Desru_2155 NC_015589.1 2170956 2171684 R TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: drm:Dred_0038 pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; pyruvate formate-lyase activating enzyme complement(2170956..2171684) Desulfotomaculum ruminis DSM 2154 10738549 YP_004545692.1 CDS Desru_2156 NC_015589.1 2171753 2172139 R PFAM: small multidrug resistance protein; KEGG: drm:Dred_3289 small multidrug resistance protein; small multidrug resistance protein complement(2171753..2172139) Desulfotomaculum ruminis DSM 2154 10738550 YP_004545693.1 CDS Desru_2157 NC_015589.1 2172139 2172693 R PFAM: regulatory protein TetR; KEGG: oih:OB0995 transcriptional regulator; regulatory protein TetR complement(2172139..2172693) Desulfotomaculum ruminis DSM 2154 10738551 YP_004545694.1 CDS Desru_2158 NC_015589.1 2172819 2175050 R TIGRFAM: formate acetyltransferase; KEGG: drm:Dred_0039 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase complement(2172819..2175050) Desulfotomaculum ruminis DSM 2154 10738552 YP_004545695.1 CDS Desru_2159 NC_015589.1 2175271 2175633 R KEGG: drm:Dred_1528 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR complement(2175271..2175633) Desulfotomaculum ruminis DSM 2154 10738553 YP_004545696.1 CDS Desru_2160 NC_015589.1 2176464 2177912 R KEGG: drm:Dred_2292 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(2176464..2177912) Desulfotomaculum ruminis DSM 2154 10738554 YP_004545697.1 CDS Desru_2161 NC_015589.1 2178142 2178921 R PFAM: amidohydrolase 2; KEGG: tjr:TherJR_1661 amidohydrolase 2; amidohydrolase 2 complement(2178142..2178921) Desulfotomaculum ruminis DSM 2154 10738555 YP_004545698.1 CDS Desru_2162 NC_015589.1 2179194 2180165 R PFAM: protein of unknown function DUF81; KEGG: drm:Dred_0424 hypothetical protein; hypothetical protein complement(2179194..2180165) Desulfotomaculum ruminis DSM 2154 10738556 YP_004545699.1 CDS Desru_2163 NC_015589.1 2180332 2180547 R KEGG: pth:PTH_1837 hypothetical protein; hypothetical protein complement(2180332..2180547) Desulfotomaculum ruminis DSM 2154 10738557 YP_004545700.1 CDS Desru_2164 NC_015589.1 2180581 2181774 R KEGG: pth:PTH_1838 hypothetical protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; germination protein Ger(x)C family complement(2180581..2181774) Desulfotomaculum ruminis DSM 2154 10738558 YP_004545701.1 CDS Desru_2165 NC_015589.1 2181767 2182870 R KEGG: pth:PTH_1839 hypothetical protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein complement(2181767..2182870) Desulfotomaculum ruminis DSM 2154 10738559 YP_004545702.1 CDS Desru_2166 NC_015589.1 2182842 2184515 R PFAM: GerA spore germination protein; KEGG: pth:PTH_1840 hypothetical protein; GerA spore germination protein complement(2182842..2184515) Desulfotomaculum ruminis DSM 2154 10738560 YP_004545703.1 CDS Desru_2167 NC_015589.1 2184756 2185922 D KEGG: afn:Acfer_0135 lysine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; lysine decarboxylase 2184756..2185922 Desulfotomaculum ruminis DSM 2154 10738561 YP_004545704.1 CDS Desru_2168 NC_015589.1 2185994 2186443 R KEGG: drm:Dred_1804 GatB/YqeY domain-containing protein; GatB/YqeY domain-containing protein complement(2185994..2186443) Desulfotomaculum ruminis DSM 2154 10738562 YP_004545705.1 CDS Desru_2169 NC_015589.1 2186649 2187857 R PFAM: major facilitator superfamily MFS_1; KEGG: bwe:BcerKBAB4_2580 major facilitator transporter; major facilitator superfamily protein complement(2186649..2187857) Desulfotomaculum ruminis DSM 2154 10738563 YP_004545706.1 CDS Desru_2170 NC_015589.1 2188472 2190583 R KEGG: drm:Dred_1803 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1A family complement(2188472..2190583) Desulfotomaculum ruminis DSM 2154 10738564 YP_004545707.1 CDS Desru_2171 NC_015589.1 2190961 2191260 R KEGG: drm:Dred_1802 hypothetical protein; hypothetical protein complement(2190961..2191260) Desulfotomaculum ruminis DSM 2154 10738565 YP_004545708.1 CDS Desru_2172 NC_015589.1 2191400 2192026 D KEGG: drm:Dred_1801 hypothetical protein; hypothetical protein 2191400..2192026 Desulfotomaculum ruminis DSM 2154 10738566 YP_004545709.1 CDS Desru_2173 NC_015589.1 2192028 2193197 R PFAM: glycosyl transferase group 1; KEGG: drm:Dred_1800 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2192028..2193197) Desulfotomaculum ruminis DSM 2154 10738567 YP_004545710.1 CDS Desru_2174 NC_015589.1 2193262 2193546 R PFAM: Late competence development protein ComFB; KEGG: drm:Dred_1799 hypothetical protein; late competence development protein ComFB complement(2193262..2193546) Desulfotomaculum ruminis DSM 2154 10738568 YP_004545711.1 CDS Desru_2175 NC_015589.1 2193582 2194658 R KEGG: drm:Dred_1798 6-phosphofructokinase; TIGRFAM: phosphofructokinase; PFAM: phosphofructokinase; phosphofructokinase complement(2193582..2194658) Desulfotomaculum ruminis DSM 2154 10738569 YP_004545712.1 CDS Desru_2176 NC_015589.1 2194832 2196025 R PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2240 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2194832..2196025) Desulfotomaculum ruminis DSM 2154 10738570 YP_004545713.1 CDS Desru_2177 NC_015589.1 2196257 2199025 R PFAM: protein of unknown function UPF0182; KEGG: drm:Dred_1797 hypothetical protein; hypothetical protein complement(2196257..2199025) Desulfotomaculum ruminis DSM 2154 10738571 YP_004545714.1 CDS Desru_2178 NC_015589.1 2199069 2199263 R KEGG: dau:Daud_1114 hypothetical protein; hypothetical protein complement(2199069..2199263) Desulfotomaculum ruminis DSM 2154 10738572 YP_004545715.1 CDS Desru_2179 NC_015589.1 2199393 2200349 R TIGRFAM: D-alanine/D-alanine ligase; KEGG: drm:Dred_1796 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase complement(2199393..2200349) Desulfotomaculum ruminis DSM 2154 10738573 YP_004545716.1 CDS Desru_2180 NC_015589.1 2200612 2202024 D KEGG: drm:Dred_1794 hydrogenase large subunit; PFAM: hydrogenase large subunit domain protein; ferredoxin hydrogenase 2200612..2202024 Desulfotomaculum ruminis DSM 2154 10738574 YP_004545717.1 CDS Desru_2181 NC_015589.1 2202107 2202799 R KEGG: eel:EUBELI_01840 hypothetical protein; hypothetical protein complement(2202107..2202799) Desulfotomaculum ruminis DSM 2154 10738575 YP_004545718.1 CDS Desru_2182 NC_015589.1 2202940 2204520 R PFAM: protein of unknown function DUF1538; KEGG: str:Sterm_0908 protein of unknown function DUF1538; hypothetical protein complement(2202940..2204520) Desulfotomaculum ruminis DSM 2154 10738576 YP_004545719.1 CDS Desru_2183 NC_015589.1 2204916 2205356 R PFAM: CBS domain containing protein; KEGG: bpf:BpOF4_21624 CBS domain containing membrane protein; hypothetical protein complement(2204916..2205356) Desulfotomaculum ruminis DSM 2154 10738577 YP_004545720.1 CDS Desru_2185 NC_015589.1 2206086 2208704 R KEGG: drm:Dred_1527 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase complement(2206086..2208704) Desulfotomaculum ruminis DSM 2154 10738579 YP_004545721.1 CDS Desru_2186 NC_015589.1 2209011 2211383 R KEGG: aoe:Clos_1087 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase complement(2209011..2211383) Desulfotomaculum ruminis DSM 2154 10738580 YP_004545722.1 CDS Desru_2187 NC_015589.1 2211490 2212308 R PFAM: zinc/iron permease; KEGG: lsp:Bsph_4352 zinc transporter ZupT; zinc/iron permease complement(2211490..2212308) Desulfotomaculum ruminis DSM 2154 10738581 YP_004545723.1 CDS Desru_2188 NC_015589.1 2212600 2213850 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ckr:CKR_3387 hypothetical protein; transposase IS116/IS110/IS902 family protein 2212600..2213850 Desulfotomaculum ruminis DSM 2154 10738582 YP_004545724.1 CDS Desru_2189 NC_015589.1 2214162 2215316 R KEGG: tmt:Tmath_1409 copper amine oxidase domain protein; PFAM: copper amine oxidase-like domain-containing protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; copper amine oxidase-like domain-containing protein complement(2214162..2215316) Desulfotomaculum ruminis DSM 2154 10738583 YP_004545725.1 CDS Desru_2190 NC_015589.1 2215614 2215979 D PFAM: Protein of unknown function DUF2512; KEGG: nth:Nther_1861 hypothetical protein; hypothetical protein 2215614..2215979 Desulfotomaculum ruminis DSM 2154 10738584 YP_004545726.1 CDS Desru_2191 NC_015589.1 2216106 2216234 R hypothetical protein complement(2216106..2216234) Desulfotomaculum ruminis DSM 2154 10738585 YP_004545727.1 CDS Desru_2192 NC_015589.1 2216580 2217548 D SMART: Elongator protein 3/MiaB/NifB; KEGG: clj:CLJU_c22770 radical SAM domain-containing protein; elongator protein 3/MiaB/NifB 2216580..2217548 Desulfotomaculum ruminis DSM 2154 10738586 YP_004545728.1 CDS Desru_2193 NC_015589.1 2217717 2217857 D KEGG: gtn:GTNG_1424 hypothetical protein; hypothetical protein 2217717..2217857 Desulfotomaculum ruminis DSM 2154 10738587 YP_004545729.1 CDS Desru_2194 NC_015589.1 2218024 2218431 R KEGG: dau:Daud_0832 hypothetical protein; hypothetical protein complement(2218024..2218431) Desulfotomaculum ruminis DSM 2154 10738588 YP_004545730.1 CDS Desru_2195 NC_015589.1 2218696 2221308 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: gym:GYMC10_3473 phosphoenolpyruvate synthase; pyruvate phosphate dikinase PEP/pyruvate-binding protein complement(2218696..2221308) Desulfotomaculum ruminis DSM 2154 10738589 YP_004545731.1 CDS Desru_2196 NC_015589.1 2222075 2223019 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dhd:Dhaf_0729 protein of unknown function DUF6 transmembrane; hypothetical protein 2222075..2223019 Desulfotomaculum ruminis DSM 2154 10738590 YP_004545732.1 CDS Desru_2197 NC_015589.1 2223101 2223829 R PFAM: cyclase family protein; KEGG: tle:Tlet_0260 cyclase family protein; cyclase family protein complement(2223101..2223829) Desulfotomaculum ruminis DSM 2154 10738591 YP_004545733.1 CDS Desru_2198 NC_015589.1 2223858 2225189 R PFAM: Radical SAM domain protein; KEGG: dal:Dalk_4338 radical SAM domain protein; radical SAM protein complement(2223858..2225189) Desulfotomaculum ruminis DSM 2154 10738592 YP_004545734.1 CDS Desru_2199 NC_015589.1 2225176 2225649 R PFAM: cyclase/dehydrase; KEGG: cpo:COPRO5265_0653 polyketide cyclase/dehydrase superfamily; cyclase/dehydrase complement(2225176..2225649) Desulfotomaculum ruminis DSM 2154 10738593 YP_004545735.1 CDS Desru_2200 NC_015589.1 2225697 2226704 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: nde:NIDE0700 putative dihydroflavanol 4-reductase; NAD-dependent epimerase/dehydratase complement(2225697..2226704) Desulfotomaculum ruminis DSM 2154 10738594 YP_004545736.1 CDS Desru_2201 NC_015589.1 2226745 2227506 R KEGG: rci:LRC395 hypothetical protein; hypothetical protein complement(2226745..2227506) Desulfotomaculum ruminis DSM 2154 10738595 YP_004545737.1 CDS Desru_2202 NC_015589.1 2227534 2228121 R PFAM: Methyltransferase type 11; KEGG: bpf:BpOF4_20064 SAM-dependent methyltransferase; type 11 methyltransferase complement(2227534..2228121) Desulfotomaculum ruminis DSM 2154 10738596 YP_004545738.1 CDS Desru_2203 NC_015589.1 2228126 2228959 R KEGG: cbt:CLH_0633 putative arylesterase; hypothetical protein complement(2228126..2228959) Desulfotomaculum ruminis DSM 2154 10738597 YP_004545739.1 CDS Desru_2204 NC_015589.1 2228973 2230214 R KEGG: afl:Aflv_2139 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase; beta-ketoacyl-acyl-carrier-protein synthase II complement(2228973..2230214) Desulfotomaculum ruminis DSM 2154 10738598 YP_004545740.1 CDS Desru_2205 NC_015589.1 2230239 2231468 R PFAM: Beta-ketoacyl synthase; KEGG: tjr:TherJR_2071 3-oxoacyl-(acyl-carrier-protein) synthase 2; beta-ketoacyl synthase complement(2230239..2231468) Desulfotomaculum ruminis DSM 2154 10738599 YP_004545741.1 CDS Desru_2206 NC_015589.1 2231470 2232321 R KEGG: stp:Strop_3246 hypothetical protein; hypothetical protein complement(2231470..2232321) Desulfotomaculum ruminis DSM 2154 10738600 YP_004545742.1 CDS Desru_2207 NC_015589.1 2232334 2233509 R PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein; ABC transporter complement(2232334..2233509) Desulfotomaculum ruminis DSM 2154 10738601 YP_004545743.1 CDS Desru_2208 NC_015589.1 2233513 2234319 R KEGG: ckr:CKR_3098 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2233513..2234319) Desulfotomaculum ruminis DSM 2154 10738602 YP_004545744.1 CDS Desru_2209 NC_015589.1 2234324 2235532 R PFAM: secretion protein HlyD family protein; KEGG: tjr:TherJR_1943 secretion protein HlyD family protein; secretion protein HlyD family protein complement(2234324..2235532) Desulfotomaculum ruminis DSM 2154 10738603 YP_004545745.1 CDS Desru_2210 NC_015589.1 2236259 2236444 D KEGG: rno:81653 drebrin 1; hypothetical protein 2236259..2236444 Desulfotomaculum ruminis DSM 2154 10738605 YP_004545746.1 CDS Desru_2211 NC_015589.1 2236487 2238487 R KEGG: drm:Dred_1762 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G complement(2236487..2238487) Desulfotomaculum ruminis DSM 2154 10738606 YP_004545747.1 CDS Desru_2212 NC_015589.1 2238811 2240364 D KEGG: drm:Dred_1761 polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; stage V sporulation protein B 2238811..2240364 Desulfotomaculum ruminis DSM 2154 10738607 YP_004545748.1 CDS Desru_2213 NC_015589.1 2240640 2240807 D KEGG: drm:Dred_1322 small, acid-soluble spore proteins, alpha/be; small acid-soluble spore protein alpha/beta type 2240640..2240807 Desulfotomaculum ruminis DSM 2154 10738608 YP_004545749.1 CDS Desru_2214 NC_015589.1 2240841 2241602 R KEGG: drm:Dred_1760 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE complement(2240841..2241602) Desulfotomaculum ruminis DSM 2154 10738609 YP_004545750.1 CDS Desru_2215 NC_015589.1 2241611 2241790 R KEGG: pth:PTH_1398 hypothetical protein; hypothetical protein complement(2241611..2241790) Desulfotomaculum ruminis DSM 2154 10738610 YP_004545751.1 CDS Desru_2216 NC_015589.1 2241816 2242382 R TIGRFAM: GTP cyclohydrolase I; KEGG: drm:Dred_1758 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; GTP cyclohydrolase I complement(2241816..2242382) Desulfotomaculum ruminis DSM 2154 10738611 YP_004545752.1 CDS Desru_2217 NC_015589.1 2242396 2243136 R PFAM: Radical SAM domain protein; KEGG: drm:Dred_1757 radical SAM domain-containing protein; radical SAM protein complement(2242396..2243136) Desulfotomaculum ruminis DSM 2154 10738612 YP_004545753.1 CDS Desru_2218 NC_015589.1 2243136 2243699 R PFAM: protein of unknown function DUF366; KEGG: drm:Dred_1756 hypothetical protein; hypothetical protein complement(2243136..2243699) Desulfotomaculum ruminis DSM 2154 10738613 YP_004545754.1 CDS Desru_2219 NC_015589.1 2243689 2244405 R KEGG: drm:Dred_1755 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; exsB protein complement(2243689..2244405) Desulfotomaculum ruminis DSM 2154 10738614 YP_004545755.1 CDS Desru_2220 NC_015589.1 2244406 2244789 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: drm:Dred_1754 putative 6-pyruvoyl tetrahydropterin synthase; hypothetical protein complement(2244406..2244789) Desulfotomaculum ruminis DSM 2154 10738615 YP_004545756.1 CDS Desru_2221 NC_015589.1 2245154 2246239 R PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1753 TPR repeat-containing protein; hypothetical protein complement(2245154..2246239) Desulfotomaculum ruminis DSM 2154 10738616 YP_004545757.1 CDS Desru_2222 NC_015589.1 2246456 2246908 D KEGG: drm:Dred_1752 hypothetical protein; hypothetical protein 2246456..2246908 Desulfotomaculum ruminis DSM 2154 10738617 YP_004545758.1 CDS Desru_2223 NC_015589.1 2246970 2247899 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: drm:Dred_1749 thioredoxin-disulfide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2246970..2247899) Desulfotomaculum ruminis DSM 2154 10738618 YP_004545759.1 CDS Desru_2224 NC_015589.1 2247923 2248132 R PFAM: Heavy metal transport/detoxification protein; KEGG: hmo:HM1_1698 copper ion binding protein, putative; heavy metal transport/detoxification protein complement(2247923..2248132) Desulfotomaculum ruminis DSM 2154 10738619 YP_004545760.1 CDS Desru_2225 NC_015589.1 2248157 2250583 R KEGG: dae:Dtox_2078 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase complement(2248157..2250583) Desulfotomaculum ruminis DSM 2154 10738620 YP_004545761.1 CDS Desru_2226 NC_015589.1 2250761 2250856 D hypothetical protein 2250761..2250856 Desulfotomaculum ruminis DSM 2154 10738621 YP_004545762.1 CDS Desru_2227 NC_015589.1 2250915 2251109 D KEGG: cdu:CD36_19410 LAS seventeen-binding protein 3, putative; LAS seventeen-binding protein 3 2250915..2251109 Desulfotomaculum ruminis DSM 2154 10738622 YP_004545763.1 CDS Desru_2228 NC_015589.1 2251188 2251784 R PFAM: Radical SAM domain protein; KEGG: drm:Dred_1747 radical SAM domain-containing protein; radical SAM protein complement(2251188..2251784) Desulfotomaculum ruminis DSM 2154 10738623 YP_004545764.1 CDS Desru_2229 NC_015589.1 2251868 2252269 D KEGG: drm:Dred_1746 hypothetical protein; hypothetical protein 2251868..2252269 Desulfotomaculum ruminis DSM 2154 10738624 YP_004545765.1 CDS Desru_2230 NC_015589.1 2252276 2253541 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: drm:Dred_1745 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS sensor protein complement(2252276..2253541) Desulfotomaculum ruminis DSM 2154 10738625 YP_004545766.1 CDS Desru_2231 NC_015589.1 2253898 2254401 R KEGG: drm:Dred_1744 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(2253898..2254401) Desulfotomaculum ruminis DSM 2154 10738626 YP_004545767.1 CDS Desru_2232 NC_015589.1 2254539 2257343 R SMART: Exonuclease; helicase c2; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: drm:Dred_1743 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; type III restriction protein res subunit; DNA polymerase III subunit epsilon complement(2254539..2257343) Desulfotomaculum ruminis DSM 2154 10738627 YP_004545768.1 CDS Desru_2233 NC_015589.1 2257508 2257861 D KEGG: drm:Dred_1742 hypothetical protein; hypothetical protein 2257508..2257861 Desulfotomaculum ruminis DSM 2154 10738628 YP_004545769.1 CDS Desru_2234 NC_015589.1 2257925 2258359 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: drm:Dred_1741 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2257925..2258359 Desulfotomaculum ruminis DSM 2154 10738629 YP_004545770.1 CDS Desru_2235 NC_015589.1 2258416 2259873 R PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: drm:Dred_2150 thiamine biosynthesis protein ThiH; biotin and thiamin synthesis associated protein complement(2258416..2259873) Desulfotomaculum ruminis DSM 2154 10738630 YP_004545771.1 CDS Desru_2236 NC_015589.1 2260243 2260470 D KEGG: aar:Acear_0651 radical SAM domain protein; radical SAM domain-containing protein 2260243..2260470 Desulfotomaculum ruminis DSM 2154 10738631 YP_004545772.1 CDS Desru_2237 NC_015589.1 2260430 2260693 D PFAM: protein of unknown function DUF156; KEGG: cbe:Cbei_3063 hypothetical protein; hypothetical protein 2260430..2260693 Desulfotomaculum ruminis DSM 2154 10738632 YP_004545773.1 CDS Desru_2238 NC_015589.1 2260819 2262678 D KEGG: cbe:Cbei_3064 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 2260819..2262678 Desulfotomaculum ruminis DSM 2154 10738633 YP_004545774.1 CDS Desru_2239 NC_015589.1 2262675 2262857 D KEGG: ckl:CKL_2718 hypothetical protein; hypothetical protein 2262675..2262857 Desulfotomaculum ruminis DSM 2154 10738634 YP_004545775.1 CDS Desru_2240 NC_015589.1 2262984 2264408 R KEGG: drm:Dred_2640 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein complement(2262984..2264408) Desulfotomaculum ruminis DSM 2154 10738635 YP_004545776.1 CDS Desru_2241 NC_015589.1 2264410 2265114 R KEGG: drm:Dred_2641 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(2264410..2265114) Desulfotomaculum ruminis DSM 2154 10738636 YP_004545777.1 CDS Desru_2242 NC_015589.1 2265111 2266478 R KEGG: drm:Dred_2642 hypothetical protein; hypothetical protein complement(2265111..2266478) Desulfotomaculum ruminis DSM 2154 10738637 YP_004545778.1 CDS Desru_2243 NC_015589.1 2266807 2267151 D PFAM: small multidrug resistance protein; KEGG: dhd:Dhaf_1073 small multidrug resistance protein; small multidrug resistance protein 2266807..2267151 Desulfotomaculum ruminis DSM 2154 10738638 YP_004545779.1 CDS Desru_2244 NC_015589.1 2267154 2267468 D PFAM: small multidrug resistance protein; KEGG: esi:Exig_0411 small multidrug resistance protein; small multidrug resistance protein 2267154..2267468 Desulfotomaculum ruminis DSM 2154 10738639 YP_004545780.1 CDS Desru_2245 NC_015589.1 2267587 2268825 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dae:Dtox_1282 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein complement(2267587..2268825) Desulfotomaculum ruminis DSM 2154 10738640 YP_004545781.1 CDS Desru_2246 NC_015589.1 2269302 2270135 D PFAM: ATPase-like, ParA/MinD; KEGG: drm:Dred_0660 nucleotide-binding protein; ParA/MinD ATPase-like protein 2269302..2270135 Desulfotomaculum ruminis DSM 2154 10738641 YP_004545782.1 CDS Desru_2247 NC_015589.1 2270608 2271021 D KEGG: cbe:Cbei_2221 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Rrf2 family transcriptional regulator 2270608..2271021 Desulfotomaculum ruminis DSM 2154 10738642 YP_004545783.1 CDS Desru_2248 NC_015589.1 2271101 2272480 D KEGG: cbe:Cbei_2222 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 2271101..2272480 Desulfotomaculum ruminis DSM 2154 10738643 YP_004545784.1 CDS Desru_2249 NC_015589.1 2272607 2273263 D PFAM: pentapeptide repeat protein; KEGG: cbh:CLC_0905 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein 2272607..2273263 Desulfotomaculum ruminis DSM 2154 10738644 YP_004545785.1 CDS Desru_2250 NC_015589.1 2273484 2274356 D SMART: regulatory protein MerR; KEGG: dsy:DSY1408 hypothetical protein; regulatory protein MerR 2273484..2274356 Desulfotomaculum ruminis DSM 2154 10738645 YP_004545786.1 CDS Desru_2251 NC_015589.1 2274475 2275161 R KEGG: drm:Dred_1740 metal-dependent hydrolase; metal-dependent hydrolase complement(2274475..2275161) Desulfotomaculum ruminis DSM 2154 10738646 YP_004545787.1 CDS Desru_2252 NC_015589.1 2275265 2276149 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; KEGG: chy:CHY_0913 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; succinyl-CoA synthetase subunit alpha complement(2275265..2276149) Desulfotomaculum ruminis DSM 2154 10738647 YP_004545788.1 CDS Desru_2253 NC_015589.1 2276152 2277273 R TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: hmo:HM1_0374 succinyl-coa synthase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta complement(2276152..2277273) Desulfotomaculum ruminis DSM 2154 10738648 YP_004545789.1 CDS Desru_2254 NC_015589.1 2277322 2277864 R KEGG: drm:Dred_1739 hypothetical protein; hypothetical protein complement(2277322..2277864) Desulfotomaculum ruminis DSM 2154 10738649 YP_004545790.1 CDS Desru_2255 NC_015589.1 2278216 2279832 R TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; amino acid-binding ACT domain protein; KEGG: dhd:Dhaf_1326 putative sigma54 specific transcriptional regulator; SMART: PAS domain containing protein; AAA ATPase; PAS sensor protein complement(2278216..2279832) Desulfotomaculum ruminis DSM 2154 10738650 YP_004545791.1 CDS Desru_2256 NC_015589.1 2280095 2281039 R KEGG: toc:Toce_1565 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; phosphate butyryltransferase complement(2280095..2281039) Desulfotomaculum ruminis DSM 2154 10738651 YP_004545792.1 CDS Desru_2257 NC_015589.1 2281054 2282118 R KEGG: amt:Amet_4431 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; butyrate kinase complement(2281054..2282118) Desulfotomaculum ruminis DSM 2154 10738652 YP_004545793.1 CDS Desru_2258 NC_015589.1 2282205 2283017 R KEGG: nth:Nther_2702 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; transcriptional regulator IclR complement(2282205..2283017) Desulfotomaculum ruminis DSM 2154 10738653 YP_004545794.1 CDS Desru_2260 NC_015589.1 2284779 2285321 R PFAM: transcriptional regulator domain-containing protein; KEGG: drm:Dred_1738 response regulator receiver protein; transcriptional regulator domain-containing protein complement(2284779..2285321) Desulfotomaculum ruminis DSM 2154 10738655 YP_004545795.1 CDS Desru_2263 NC_015589.1 2287955 2288491 R KEGG: pth:PTH_1558 DNA-directed RNA polymerase specialized sigma subunit; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 family RNA polymerase sigma factor complement(2287955..2288491) Desulfotomaculum ruminis DSM 2154 10738658 YP_004545796.1 CDS Desru_2264 NC_015589.1 2288785 2289513 D KEGG: dae:Dtox_2766 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; LytTr DNA-binding protein 2288785..2289513 Desulfotomaculum ruminis DSM 2154 10738659 YP_004545797.1 CDS Desru_2265 NC_015589.1 2289744 2290259 D KEGG: mac:MA1195 hypothetical protein; hypothetical protein 2289744..2290259 Desulfotomaculum ruminis DSM 2154 10738660 YP_004545798.1 CDS Desru_2266 NC_015589.1 2290520 2291625 D KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein join(2290520..2290774,2290774..2291625) Desulfotomaculum ruminis DSM 2154 10738661 YP_004545799.1 CDS Desru_2267 NC_015589.1 2292005 2292460 D KEGG: ttm:Tthe_2271 hypothetical protein; hypothetical protein 2292005..2292460 Desulfotomaculum ruminis DSM 2154 10738662 YP_004545800.1 CDS Desru_2269 NC_015589.1 2292871 2293788 R KEGG: drm:Dred_1736 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase complement(2292871..2293788) Desulfotomaculum ruminis DSM 2154 10738664 YP_004545801.1 CDS Desru_2270 NC_015589.1 2293942 2295417 R PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: drm:Dred_1735 heat repeat-containing PBS lyase; PBS lyase HEAT domain-containing protein complement(2293942..2295417) Desulfotomaculum ruminis DSM 2154 10738665 YP_004545802.1 CDS Desru_2271 NC_015589.1 2295517 2295687 R KEGG: sth:STH2455 hypothetical protein; hypothetical protein complement(2295517..2295687) Desulfotomaculum ruminis DSM 2154 10738666 YP_004545803.1 CDS Desru_2272 NC_015589.1 2295692 2296939 R KEGG: drm:Dred_1734 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; germination protein Ger(x)C family complement(2295692..2296939) Desulfotomaculum ruminis DSM 2154 10738667 YP_004545804.1 CDS Desru_2273 NC_015589.1 2296914 2298032 R KEGG: drm:Dred_1733 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein complement(2296914..2298032) Desulfotomaculum ruminis DSM 2154 10738668 YP_004545805.1 CDS Desru_2274 NC_015589.1 2298076 2299974 R PFAM: GerA spore germination protein; KEGG: drm:Dred_1732 GerA spore germination protein; GerA spore germination protein complement(2298076..2299974) Desulfotomaculum ruminis DSM 2154 10738669 YP_004545806.1 CDS Desru_2275 NC_015589.1 2300071 2300637 R PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: hmo:HM1_2762 2-oxoglutarate oxidoreductase, gamma subunit, putative; pyruvate/ketoisovalerate oxidoreductase catalytic domain-containing protein complement(2300071..2300637) Desulfotomaculum ruminis DSM 2154 10738670 YP_004545807.1 CDS Desru_2276 NC_015589.1 2300639 2301457 R KEGG: hmo:HM1_2763 2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; 2-oxoglutarate synthase complement(2300639..2301457) Desulfotomaculum ruminis DSM 2154 10738671 YP_004545808.1 CDS Desru_2277 NC_015589.1 2301445 2302593 R PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(2301445..2302593) Desulfotomaculum ruminis DSM 2154 10738672 YP_004545809.1 CDS Desru_2278 NC_015589.1 2302590 2302817 R KEGG: aco:Amico_0794 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(2302590..2302817) Desulfotomaculum ruminis DSM 2154 10738673 YP_004545810.1 CDS Desru_2279 NC_015589.1 2303118 2304266 R PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1730 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2303118..2304266) Desulfotomaculum ruminis DSM 2154 10738674 YP_004545811.1 CDS Desru_2280 NC_015589.1 2304259 2304546 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: drm:Dred_1729 BFD/(2Fe-2S)-binding domain-containing protein; BFD (2Fe-2S)-binding domain-containing protein complement(2304259..2304546) Desulfotomaculum ruminis DSM 2154 10738675 YP_004545812.1 CDS Desru_2281 NC_015589.1 2304547 2305041 R KEGG: drm:Dred_1728 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(2304547..2305041) Desulfotomaculum ruminis DSM 2154 10738676 YP_004545813.1 CDS Desru_2282 NC_015589.1 2305061 2306137 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fpl:Ferp_2556 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2305061..2306137) Desulfotomaculum ruminis DSM 2154 10738677 YP_004545814.1 CDS Desru_2283 NC_015589.1 2306134 2306439 R KEGG: tko:TK0119 proline dehydrogenase, alpha subunit; proline dehydrogenase subunit alpha complement(2306134..2306439) Desulfotomaculum ruminis DSM 2154 10738678 YP_004545815.1 CDS Desru_2284 NC_015589.1 2306692 2308545 R TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; CBS domain containing protein; helix-turn-helix Fis-type; KEGG: drm:Dred_1725 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase; PAS domain containing protein; PAS sensor protein complement(2306692..2308545) Desulfotomaculum ruminis DSM 2154 10738679 YP_004545816.1 CDS Desru_2285 NC_015589.1 2308675 2309382 R KEGG: drm:Dred_1724 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2308675..2309382) Desulfotomaculum ruminis DSM 2154 10738680 YP_004545817.1 CDS Desru_2286 NC_015589.1 2309386 2310156 R KEGG: drm:Dred_1723 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2309386..2310156) Desulfotomaculum ruminis DSM 2154 10738681 YP_004545818.1 CDS Desru_2287 NC_015589.1 2310161 2311078 R PFAM: inner-membrane translocator; KEGG: drm:Dred_1722 inner-membrane translocator; inner-membrane translocator complement(2310161..2311078) Desulfotomaculum ruminis DSM 2154 10738682 YP_004545819.1 CDS Desru_2288 NC_015589.1 2311080 2311952 R PFAM: inner-membrane translocator; KEGG: drm:Dred_1721 inner-membrane translocator; inner-membrane translocator complement(2311080..2311952) Desulfotomaculum ruminis DSM 2154 10738683 YP_004545820.1 CDS Desru_2289 NC_015589.1 2312049 2313245 R PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_1720 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2312049..2313245) Desulfotomaculum ruminis DSM 2154 10738684 YP_004545821.1 CDS Desru_2290 NC_015589.1 2313336 2315084 R TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: drm:Dred_1719 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase; PAS sensor protein complement(2313336..2315084) Desulfotomaculum ruminis DSM 2154 10738685 YP_004545822.1 CDS Desru_2291 NC_015589.1 2315313 2316017 R KEGG: drm:Dred_2236 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2315313..2316017) Desulfotomaculum ruminis DSM 2154 10738686 YP_004545823.1 CDS Desru_2292 NC_015589.1 2316017 2316784 R KEGG: drm:Dred_2237 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2316017..2316784) Desulfotomaculum ruminis DSM 2154 10738687 YP_004545824.1 CDS Desru_2293 NC_015589.1 2316762 2317742 R PFAM: inner-membrane translocator; KEGG: drm:Dred_2238 inner-membrane translocator; inner-membrane translocator complement(2316762..2317742) Desulfotomaculum ruminis DSM 2154 10738688 YP_004545825.1 CDS Desru_2294 NC_015589.1 2317746 2318627 R PFAM: inner-membrane translocator; KEGG: drm:Dred_2239 inner-membrane translocator; inner-membrane translocator complement(2317746..2318627) Desulfotomaculum ruminis DSM 2154 10738689 YP_004545826.1 CDS Desru_2295 NC_015589.1 2318717 2319907 R PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2240 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2318717..2319907) Desulfotomaculum ruminis DSM 2154 10738690 YP_004545827.1 CDS Desru_2296 NC_015589.1 2320220 2321029 R PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB; integrase catalytic subunit complement(2320220..2321029) Desulfotomaculum ruminis DSM 2154 10738691 YP_004545828.1 CDS Desru_2297 NC_015589.1 2321047 2321568 R PFAM: transposase IS3/IS911 family protein; KEGG: bmj:BMULJ_05181 ISBmu5a transposase; transposase IS3/IS911 family protein complement(2321047..2321568) Desulfotomaculum ruminis DSM 2154 10738692 YP_004545829.1 CDS Desru_2298 NC_015589.1 2321733 2322566 R PFAM: purine or other phosphorylase family 1; KEGG: aar:Acear_1899 purine or other phosphorylase family 1; purine or other phosphorylase family 1 complement(2321733..2322566) Desulfotomaculum ruminis DSM 2154 10738693 YP_004545830.1 CDS Desru_2299 NC_015589.1 2322755 2323396 R KEGG: drm:Dred_1718 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein; adenylate kinase complement(2322755..2323396) Desulfotomaculum ruminis DSM 2154 10738694 YP_004545831.1 CDS Desru_2300 NC_015589.1 2323595 2323834 D KEGG: drm:Dred_1717 hypothetical protein; hypothetical protein 2323595..2323834 Desulfotomaculum ruminis DSM 2154 10738695 YP_004545832.1 CDS Desru_2301 NC_015589.1 2323946 2324062 R KEGG: tjr:TherJR_1331 hypothetical protein; hypothetical protein complement(2323946..2324062) Desulfotomaculum ruminis DSM 2154 10738696 YP_004545833.1 CDS Desru_2302 NC_015589.1 2324330 2324989 R TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: drm:Dred_1716 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2324330..2324989) Desulfotomaculum ruminis DSM 2154 10738697 YP_004545834.1 CDS Desru_2303 NC_015589.1 2324995 2325873 R KEGG: drm:Dred_1715 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A complement(2324995..2325873) Desulfotomaculum ruminis DSM 2154 10738698 YP_004545835.1 CDS Desru_2304 NC_015589.1 2325902 2327773 R KEGG: drm:Dred_1714 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein; Serine/threonine-protein kinase-like domain-containing protein complement(2325902..2327773) Desulfotomaculum ruminis DSM 2154 10738699 YP_004545836.1 CDS Desru_2305 NC_015589.1 2327838 2329262 R KEGG: drm:Dred_1713 penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase; peptidoglycan glycosyltransferase complement(2327838..2329262) Desulfotomaculum ruminis DSM 2154 10738700 YP_004545837.1 CDS Desru_2306 NC_015589.1 2329246 2330574 R PFAM: cell cycle protein; KEGG: drm:Dred_1712 cell cycle protein; cell cycle protein complement(2329246..2330574) Desulfotomaculum ruminis DSM 2154 10738701 YP_004545838.1 CDS Desru_2307 NC_015589.1 2330589 2331308 R KEGG: drm:Dred_1711 protein phosphatase 2C domain-containing protein; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; protein phosphatase 2C-like protein complement(2330589..2331308) Desulfotomaculum ruminis DSM 2154 10738702 YP_004545839.1 CDS Desru_2308 NC_015589.1 2331259 2331780 R KEGG: drm:Dred_1710 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; forkhead-associated protein complement(2331259..2331780) Desulfotomaculum ruminis DSM 2154 10738703 YP_004545840.1 CDS Desru_2309 NC_015589.1 2331782 2332561 R KEGG: drm:Dred_1709 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; forkhead-associated protein complement(2331782..2332561) Desulfotomaculum ruminis DSM 2154 10738704 YP_004545841.1 CDS Desru_2310 NC_015589.1 2332624 2333706 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: drm:Dred_1708 radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(2332624..2333706) Desulfotomaculum ruminis DSM 2154 10738705 YP_004545842.1 CDS Desru_2311 NC_015589.1 2333709 2335070 R KEGG: drm:Dred_1707 sun protein; TIGRFAM: sun protein; transcription antitermination factor NusB; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein complement(2333709..2335070) Desulfotomaculum ruminis DSM 2154 10738706 YP_004545843.1 CDS Desru_2312 NC_015589.1 2335067 2335876 R PFAM: protein of unknown function DUF116; KEGG: drm:Dred_1706 hypothetical protein; hypothetical protein complement(2335067..2335876) Desulfotomaculum ruminis DSM 2154 10738707 YP_004545844.1 CDS Desru_2313 NC_015589.1 2335894 2336829 R KEGG: drm:Dred_1705 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase complement(2335894..2336829) Desulfotomaculum ruminis DSM 2154 10738708 YP_004545845.1 CDS Desru_2314 NC_015589.1 2336847 2337305 R KEGG: drm:Dred_1704 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase complement(2336847..2337305) Desulfotomaculum ruminis DSM 2154 10738709 YP_004545846.1 CDS Desru_2315 NC_015589.1 2337540 2339729 R TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: drm:Dred_1703 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' complement(2337540..2339729) Desulfotomaculum ruminis DSM 2154 10738710 YP_004545847.1 CDS Desru_2316 NC_015589.1 2339733 2340950 R TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: drm:Dred_1702 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(2339733..2340950) Desulfotomaculum ruminis DSM 2154 10738711 YP_004545848.1 CDS Desru_2317 NC_015589.1 2340956 2341162 R KEGG: drm:Dred_1701 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega complement(2340956..2341162) Desulfotomaculum ruminis DSM 2154 10738712 YP_004545849.1 CDS Desru_2318 NC_015589.1 2341199 2341801 R KEGG: drm:Dred_1700 guanylate kinase; PFAM: guanylate kinase; manually curated; TIGRFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase complement(2341199..2341801) Desulfotomaculum ruminis DSM 2154 10738713 YP_004545850.1 CDS Desru_2319 NC_015589.1 2341814 2342086 R PFAM: protein of unknown function DUF370; KEGG: drm:Dred_1699 hypothetical protein; hypothetical protein complement(2341814..2342086) Desulfotomaculum ruminis DSM 2154 10738714 YP_004545851.1 CDS Desru_2320 NC_015589.1 2342111 2342992 R PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: drm:Dred_1698 hypothetical protein; YicC-like domain-containing protein complement(2342111..2342992) Desulfotomaculum ruminis DSM 2154 10738715 YP_004545852.1 CDS Desru_2321 NC_015589.1 2343352 2344071 R TIGRFAM: sporulation protein, yteA family; KEGG: drm:Dred_1697 TraR/DksA family transcriptional regulator; YteA family sporulation protein complement(2343352..2344071) Desulfotomaculum ruminis DSM 2154 10738716 YP_004545853.1 CDS Desru_2322 NC_015589.1 2344255 2345448 R PFAM: aminotransferase class I and II; KEGG: drm:Dred_1696 aminotransferase, class I and II; class I and II aminotransferase complement(2344255..2345448) Desulfotomaculum ruminis DSM 2154 10738717 YP_004545854.1 CDS Desru_2323 NC_015589.1 2345502 2346680 R KEGG: drm:Dred_1695 LL-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II; LL-diaminopimelate aminotransferase complement(2345502..2346680) Desulfotomaculum ruminis DSM 2154 10738718 YP_004545855.1 CDS Desru_2324 NC_015589.1 2346751 2347596 R TIGRFAM: diaminopimelate epimerase; KEGG: drm:Dred_1694 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(2346751..2347596) Desulfotomaculum ruminis DSM 2154 10738719 YP_004545856.1 CDS Desru_2327 NC_015589.1 2349577 2351010 D PFAM: Collagen triple helix repeat-containing protein; KEGG: bcq:BCQ_4541 collagen triple helix repeat domain protein; collagen triple helix repeat-containing protein 2349577..2351010 Desulfotomaculum ruminis DSM 2154 10738722 YP_004545857.1 CDS Desru_2328 NC_015589.1 2351387 2352286 R manually curated; KEGG: pjd:Pjdr2_1632 hypothetical protein; hypothetical protein complement(2351387..2352286) Desulfotomaculum ruminis DSM 2154 10738723 YP_004545858.1 CDS Desru_2329 NC_015589.1 2352694 2353350 D KEGG: mhu:Mhun_2078 TPR repeat-containing protein; hypothetical protein 2352694..2353350 Desulfotomaculum ruminis DSM 2154 10738724 YP_004545859.1 CDS Desru_2330 NC_015589.1 2353557 2356313 R KEGG: drm:Dred_1692 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase complement(2353557..2356313) Desulfotomaculum ruminis DSM 2154 10738725 YP_004545860.1 CDS Desru_2331 NC_015589.1 2356506 2358284 D PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: drm:Dred_1691 fibronectin-binding A domain-containing protein; fibronectin-binding A domain-containing protein 2356506..2358284 Desulfotomaculum ruminis DSM 2154 10738726 YP_004545861.1 CDS Desru_2332 NC_015589.1 2358268 2359755 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: drm:Dred_1690 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(2358268..2359755) Desulfotomaculum ruminis DSM 2154 10738727 YP_004545862.1 CDS Desru_2333 NC_015589.1 2359817 2360389 R KEGG: drm:Dred_1689 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase complement(2359817..2360389) Desulfotomaculum ruminis DSM 2154 10738728 YP_004545863.1 CDS Desru_2334 NC_015589.1 2360401 2360847 R KEGG: drm:Dred_1688 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase complement(2360401..2360847) Desulfotomaculum ruminis DSM 2154 10738729 YP_004545864.1 CDS Desru_2335 NC_015589.1 2360848 2361585 R TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: drm:Dred_1687 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(2360848..2361585) Desulfotomaculum ruminis DSM 2154 10738730 YP_004545865.1 CDS Desru_2336 NC_015589.1 2361793 2362710 R KEGG: dae:Dtox_2350 dihydroorotate dehydrogenase 1B; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase family protein complement(2361793..2362710) Desulfotomaculum ruminis DSM 2154 10738731 YP_004545866.1 CDS Desru_2337 NC_015589.1 2362707 2363495 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: drm:Dred_1685 oxidoreductase FAD/NAD(P)-binding subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(2362707..2363495) Desulfotomaculum ruminis DSM 2154 10738732 YP_004545867.1 CDS Desru_2338 NC_015589.1 2363562 2366807 R KEGG: drm:Dred_1684 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit complement(2363562..2366807) Desulfotomaculum ruminis DSM 2154 10738733 YP_004545868.1 CDS Desru_2339 NC_015589.1 2366785 2367900 R KEGG: drm:Dred_1683 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; carbamoyl-phosphate synthase small subunit complement(2366785..2367900) Desulfotomaculum ruminis DSM 2154 10738734 YP_004545869.1 CDS Desru_2340 NC_015589.1 2367978 2369264 R TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: drm:Dred_1682 dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase multifunctional complex type complement(2367978..2369264) Desulfotomaculum ruminis DSM 2154 10738735 YP_004545870.1 CDS Desru_2341 NC_015589.1 2369248 2370186 R TIGRFAM: aspartate carbamoyltransferase; KEGG: drm:Dred_1681 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase complement(2369248..2370186) Desulfotomaculum ruminis DSM 2154 10738736 YP_004545871.1 CDS Desru_2342 NC_015589.1 2370356 2370910 R KEGG: drm:Dred_1680 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase complement(2370356..2370910) Desulfotomaculum ruminis DSM 2154 10738737 YP_004545872.1 CDS Desru_2343 NC_015589.1 2371328 2371603 R KEGG: drm:Dred_1679 hypothetical protein; hypothetical protein complement(2371328..2371603) Desulfotomaculum ruminis DSM 2154 10738738 YP_004545873.1 CDS Desru_2344 NC_015589.1 2371724 2373175 D PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1678 major facilitator transporter; major facilitator superfamily protein 2371724..2373175 Desulfotomaculum ruminis DSM 2154 10738739 YP_004545874.1 CDS Desru_2345 NC_015589.1 2373300 2374109 D KEGG: drm:Dred_1677 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase ComA; phosphosulfolactate synthase 2373300..2374109 Desulfotomaculum ruminis DSM 2154 10738740 YP_004545875.1 CDS Desru_2346 NC_015589.1 2374390 2375010 D PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_4628 transcriptional regulator, TetR family; regulatory protein TetR 2374390..2375010 Desulfotomaculum ruminis DSM 2154 10738741 YP_004545876.1 CDS Desru_2347 NC_015589.1 2375064 2376806 D KEGG: dsy:DSY4741 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 2375064..2376806 Desulfotomaculum ruminis DSM 2154 10738742 YP_004545877.1 CDS Desru_2348 NC_015589.1 2376820 2378553 D KEGG: dsy:DSY4742 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 2376820..2378553 Desulfotomaculum ruminis DSM 2154 10738743 YP_004545878.1 CDS Desru_2349 NC_015589.1 2378833 2379084 R KEGG: gdj:Gdia_2793 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2378833..2379084) Desulfotomaculum ruminis DSM 2154 10738744 YP_004545879.1 CDS Desru_2350 NC_015589.1 2379229 2379747 D KEGG: ddi:DDB_G0295483 RUN domain-containing protein; hypothetical protein 2379229..2379747 Desulfotomaculum ruminis DSM 2154 10738745 YP_004545880.1 CDS Desru_2351 NC_015589.1 2379866 2380225 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: ckr:CKR_0486 hypothetical protein; cupin complement(2379866..2380225) Desulfotomaculum ruminis DSM 2154 10738746 YP_004545881.1 CDS Desru_2353 NC_015589.1 2381539 2381928 D PFAM: Domain of unknown function DUF1801; KEGG: rci:RCIX1712 hypothetical protein; hypothetical protein 2381539..2381928 Desulfotomaculum ruminis DSM 2154 10738748 YP_004545882.1 CDS Desru_2354 NC_015589.1 2381979 2382878 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: clj:CLJU_c30680 putative response regulator; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2381979..2382878) Desulfotomaculum ruminis DSM 2154 10738749 YP_004545883.1 CDS Desru_2355 NC_015589.1 2383173 2384288 D KEGG: ttm:Tthe_0372 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein 2383173..2384288 Desulfotomaculum ruminis DSM 2154 10738750 YP_004545884.1 CDS Desru_2356 NC_015589.1 2384278 2385378 D KEGG: adg:Adeg_0296 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein 2384278..2385378 Desulfotomaculum ruminis DSM 2154 10738751 YP_004545885.1 CDS Desru_2357 NC_015589.1 2385383 2387023 D PFAM: GerA spore germination protein; KEGG: dae:Dtox_0585 GerA spore germination protein; GerA spore germination protein 2385383..2387023 Desulfotomaculum ruminis DSM 2154 10738752 YP_004545886.1 CDS Desru_2358 NC_015589.1 2387020 2388228 D KEGG: dae:Dtox_0584 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; germination protein Ger(x)C family 2387020..2388228 Desulfotomaculum ruminis DSM 2154 10738753 YP_004545887.1 CDS Desru_2359 NC_015589.1 2388236 2388466 D KEGG: dae:Dtox_0583 hypothetical protein; hypothetical protein 2388236..2388466 Desulfotomaculum ruminis DSM 2154 10738754 YP_004545888.1 CDS Desru_2360 NC_015589.1 2388477 2389898 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: mta:Moth_2018 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase complement(2388477..2389898) Desulfotomaculum ruminis DSM 2154 10738755 YP_004545889.1 CDS Desru_2361 NC_015589.1 2390038 2390493 D PFAM: protein of unknown function DUF441; KEGG: drm:Dred_1676 hypothetical protein; hypothetical protein 2390038..2390493 Desulfotomaculum ruminis DSM 2154 10738756 YP_004545890.1 CDS Desru_2362 NC_015589.1 2390490 2390783 R KEGG: drm:Dred_1675 hypothetical protein; hypothetical protein complement(2390490..2390783) Desulfotomaculum ruminis DSM 2154 10738757 YP_004545891.1 CDS Desru_2363 NC_015589.1 2391066 2391734 R KEGG: dol:Dole_0298 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; hydrogenase nickel incorporation protein HypB complement(2391066..2391734) Desulfotomaculum ruminis DSM 2154 10738758 YP_004545892.1 CDS Desru_2364 NC_015589.1 2391694 2392104 R PFAM: hydrogenase expression/synthesis HypA; KEGG: dol:Dole_1517 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA complement(2391694..2392104) Desulfotomaculum ruminis DSM 2154 10738759 YP_004545893.1 CDS Desru_2365 NC_015589.1 2392134 2393153 R manually curated; TIGRFAM: hydrogenase expression/formation protein HypE; KEGG: tjr:TherJR_1303 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; hydrogenase expression/formation protein HypE complement(2392134..2393153) Desulfotomaculum ruminis DSM 2154 10738760 YP_004545894.1 CDS Desru_2366 NC_015589.1 2393155 2394246 R KEGG: tye:THEYE_A1019 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD complement(2393155..2394246) Desulfotomaculum ruminis DSM 2154 10738761 YP_004545895.1 CDS Desru_2367 NC_015589.1 2394255 2394491 R KEGG: dal:Dalk_2013 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF complement(2394255..2394491) Desulfotomaculum ruminis DSM 2154 10738762 YP_004545896.1 CDS Desru_2368 NC_015589.1 2394470 2396755 R KEGG: tjr:TherJR_1300 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; (NiFe) hydrogenase maturation protein HypF complement(2394470..2396755) Desulfotomaculum ruminis DSM 2154 10738763 YP_004545897.1 CDS Desru_2369 NC_015589.1 2396784 2397284 R manually curated; TIGRFAM: hydrogenase maturation protease; KEGG: slp:Slip_0388 hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase maturation protease complement(2396784..2397284) Desulfotomaculum ruminis DSM 2154 10738764 YP_004545898.1 CDS Desru_2370 NC_015589.1 2397318 2397902 R KEGG: dau:Daud_1941 (Ni/Fe) hydrogenase, b-type cytochrome subunit; (Ni/Fe) hydrogenase b-type cytochrome subunit complement(2397318..2397902) Desulfotomaculum ruminis DSM 2154 10738765 YP_004545899.1 CDS Desru_2371 NC_015589.1 2397925 2399334 R PFAM: nickel-dependent hydrogenase large subunit; KEGG: dau:Daud_1940 hydrogen:quinone oxidoreductase; nickel-dependent hydrogenase large subunit complement(2397925..2399334) Desulfotomaculum ruminis DSM 2154 10738766 YP_004545900.1 CDS Desru_2372 NC_015589.1 2399339 2400469 R TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: dau:Daud_1939 hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA complement(2399339..2400469) Desulfotomaculum ruminis DSM 2154 10738767 YP_004545901.1 CDS Desru_2373 NC_015589.1 2400853 2401782 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: drm:Dred_1673 RluA family pseudouridine synthase; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase complement(2400853..2401782) Desulfotomaculum ruminis DSM 2154 10738768 YP_004545902.1 CDS Desru_2374 NC_015589.1 2401956 2403314 R PFAM: protein of unknown function DUF711; KEGG: drm:Dred_1672 hypothetical protein; hypothetical protein complement(2401956..2403314) Desulfotomaculum ruminis DSM 2154 10738769 YP_004545903.1 CDS Desru_2375 NC_015589.1 2403344 2403646 R PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_1671 hypothetical protein; amino acid-binding ACT domain-containing protein complement(2403344..2403646) Desulfotomaculum ruminis DSM 2154 10738770 YP_004545904.1 CDS Desru_2376 NC_015589.1 2403778 2404653 R KEGG: drm:Dred_1670 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(2403778..2404653) Desulfotomaculum ruminis DSM 2154 10738771 YP_004545905.1 CDS Desru_2377 NC_015589.1 2404667 2405899 R KEGG: drm:Dred_1669 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD complement(2404667..2405899) Desulfotomaculum ruminis DSM 2154 10738772 YP_004545906.1 CDS Desru_2378 NC_015589.1 2405989 2406651 R KEGG: drm:Dred_1668 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein complement(2405989..2406651) Desulfotomaculum ruminis DSM 2154 10738773 YP_004545907.1 CDS Desru_2379 NC_015589.1 2406862 2407149 R KEGG: drm:Dred_1667 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC complement(2406862..2407149) Desulfotomaculum ruminis DSM 2154 10738774 YP_004545908.1 CDS Desru_2380 NC_015589.1 2407222 2408334 R TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: drm:Dred_1666 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(2407222..2408334) Desulfotomaculum ruminis DSM 2154 10738775 YP_004545909.1 CDS Desru_2381 NC_015589.1 2408344 2409369 R KEGG: drm:Dred_1665 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase complement(2408344..2409369) Desulfotomaculum ruminis DSM 2154 10738776 YP_004545910.1 CDS Desru_2382 NC_015589.1 2409472 2409699 R KEGG: drm:Dred_1664 hypothetical protein; hypothetical protein complement(2409472..2409699) Desulfotomaculum ruminis DSM 2154 10738777 YP_004545911.1 CDS Desru_2383 NC_015589.1 2409699 2410265 R PFAM: protein of unknown function DUF208; KEGG: drm:Dred_1663 hypothetical protein; hypothetical protein complement(2409699..2410265) Desulfotomaculum ruminis DSM 2154 10738778 YP_004545912.1 CDS Desru_2384 NC_015589.1 2410337 2410837 R KEGG: chy:CHY_0834 hypothetical protein; hypothetical protein complement(2410337..2410837) Desulfotomaculum ruminis DSM 2154 10738779 YP_004545913.1 CDS Desru_2385 NC_015589.1 2410895 2411926 R TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: drm:Dred_1662 Holliday junction DNA helicase RuvB; SMART: AAA ATPase; Holliday junction DNA helicase RuvB complement(2410895..2411926) Desulfotomaculum ruminis DSM 2154 10738780 YP_004545914.1 CDS Desru_2386 NC_015589.1 2411939 2412547 R KEGG: drm:Dred_1661 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; Holliday junction DNA helicase RuvA complement(2411939..2412547) Desulfotomaculum ruminis DSM 2154 10738781 YP_004545915.1 CDS Desru_2387 NC_015589.1 2412548 2413036 R TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: drm:Dred_1660 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC complement(2412548..2413036) Desulfotomaculum ruminis DSM 2154 10738782 YP_004545916.1 CDS Desru_2388 NC_015589.1 2413115 2413732 R KEGG: drm:Dred_1659 hypothetical protein; hypothetical protein complement(2413115..2413732) Desulfotomaculum ruminis DSM 2154 10738783 YP_004545917.1 CDS Desru_2389 NC_015589.1 2413974 2414705 R PFAM: protein of unknown function DUF28; KEGG: drm:Dred_1658 hypothetical protein; hypothetical protein complement(2413974..2414705) Desulfotomaculum ruminis DSM 2154 10738784 YP_004545918.1 CDS Desru_2390 NC_015589.1 2414820 2415548 R TIGRFAM: NAD+ synthetase; KEGG: drm:Dred_1657 NAD+ synthetase; NAD+ synthetase complement(2414820..2415548) Desulfotomaculum ruminis DSM 2154 10738785 YP_004545919.1 CDS Desru_2391 NC_015589.1 2416168 2416656 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: drm:Dred_1656 NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 2416168..2416656 Desulfotomaculum ruminis DSM 2154 10738786 YP_004545920.1 CDS Desru_2392 NC_015589.1 2416670 2418550 D KEGG: drm:Dred_1655 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 2416670..2418550 Desulfotomaculum ruminis DSM 2154 10738787 YP_004545921.1 CDS Desru_2393 NC_015589.1 2418581 2420554 D KEGG: drm:Dred_1654 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; hydrogenase Fe-only 2418581..2420554 Desulfotomaculum ruminis DSM 2154 10738788 YP_004545922.1 CDS Desru_2395 NC_015589.1 2421415 2421618 D hypothetical protein 2421415..2421618 Desulfotomaculum ruminis DSM 2154 10738790 YP_004545923.1 CDS Desru_2396 NC_015589.1 2421895 2422377 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: drm:Dred_1653 NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 2421895..2422377 Desulfotomaculum ruminis DSM 2154 10738791 YP_004545924.1 CDS Desru_2397 NC_015589.1 2422402 2424111 D KEGG: drm:Dred_1652 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 2422402..2424111 Desulfotomaculum ruminis DSM 2154 10738792 YP_004545925.1 CDS Desru_2398 NC_015589.1 2424133 2425914 D KEGG: drm:Dred_1651 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; hydrogenase Fe-only 2424133..2425914 Desulfotomaculum ruminis DSM 2154 10738793 YP_004545926.1 CDS Desru_2399 NC_015589.1 2426099 2426947 R KEGG: drm:Dred_1411 hypothetical protein; hypothetical protein complement(2426099..2426947) Desulfotomaculum ruminis DSM 2154 10738794 YP_004545927.1 CDS Desru_2400 NC_015589.1 2427017 2428573 R KEGG: pth:PTH_1120 hypothetical protein; hypothetical protein complement(2427017..2428573) Desulfotomaculum ruminis DSM 2154 10738795 YP_004545928.1 CDS Desru_2401 NC_015589.1 2428585 2430093 R PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1410 glycosyl transferase family protein; family 2 glycosyl transferase complement(2428585..2430093) Desulfotomaculum ruminis DSM 2154 10738796 YP_004545929.1 CDS Desru_2402 NC_015589.1 2430086 2431834 R PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1409 glycosyl transferase family protein; family 2 glycosyl transferase complement(2430086..2431834) Desulfotomaculum ruminis DSM 2154 10738797 YP_004545930.1 CDS Desru_2403 NC_015589.1 2431831 2433795 R PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1408 glycosyl transferase family protein; family 2 glycosyl transferase complement(2431831..2433795) Desulfotomaculum ruminis DSM 2154 10738798 YP_004545931.1 CDS Desru_2404 NC_015589.1 2433917 2434678 D KEGG: pth:PTH_1117 hypothetical protein; hypothetical protein 2433917..2434678 Desulfotomaculum ruminis DSM 2154 10738799 YP_004545932.1 CDS Desru_2405 NC_015589.1 2434843 2435559 R PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_1650 hypothetical protein; hypothetical protein complement(2434843..2435559) Desulfotomaculum ruminis DSM 2154 10738800 YP_004545933.1 CDS Desru_2406 NC_015589.1 2435648 2437096 R KEGG: drm:Dred_1297 reactivating factor for ethanolamine ammonia lyase; manually curated; PFAM: Ethanolamine utilisation EutA; ethanolamine utilization EutA complement(2435648..2437096) Desulfotomaculum ruminis DSM 2154 10738801 YP_004545934.1 CDS Desru_2407 NC_015589.1 2437126 2437908 R KEGG: drm:Dred_1296 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase complement(2437126..2437908) Desulfotomaculum ruminis DSM 2154 10738802 YP_004545935.1 CDS Desru_2408 NC_015589.1 2437905 2439287 R KEGG: drm:Dred_1295 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase complement(2437905..2439287) Desulfotomaculum ruminis DSM 2154 10738803 YP_004545936.1 CDS Desru_2409 NC_015589.1 2439367 2440776 R KEGG: drm:Dred_1294 ethanolamine transproter; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; ethanolamine transporter complement(2439367..2440776) Desulfotomaculum ruminis DSM 2154 10738804 YP_004545937.1 CDS Desru_2410 NC_015589.1 2440943 2441401 R KEGG: drm:Dred_1293 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver complement(2440943..2441401) Desulfotomaculum ruminis DSM 2154 10738805 YP_004545938.1 CDS Desru_2411 NC_015589.1 2441367 2442842 R KEGG: drm:Dred_1292 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase dimerization/phosphoacceptor complement(2441367..2442842) Desulfotomaculum ruminis DSM 2154 10738806 YP_004545939.1 CDS Desru_2412 NC_015589.1 2443073 2443699 R manually curated; PFAM: response regulator receiver; ANTAR domain protein; KEGG: drm:Dred_1289 response regulator receiver/ANTAR domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(2443073..2443699) Desulfotomaculum ruminis DSM 2154 10738807 YP_004545940.1 CDS Desru_2413 NC_015589.1 2443791 2445452 R TIGRFAM: dihydroxy-acid dehydratase; KEGG: aar:Acear_1923 dihydroxyacid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(2443791..2445452) Desulfotomaculum ruminis DSM 2154 10738808 YP_004545941.1 CDS Desru_2414 NC_015589.1 2445478 2446473 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: tpd:Teth39_1970 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2445478..2446473) Desulfotomaculum ruminis DSM 2154 10738809 YP_004545942.1 CDS Desru_2415 NC_015589.1 2446497 2447132 R KEGG: tpd:Teth39_1971 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(2446497..2447132) Desulfotomaculum ruminis DSM 2154 10738810 YP_004545943.1 CDS Desru_2416 NC_015589.1 2447132 2448082 R PFAM: PfkB domain protein; KEGG: tpd:Teth39_1972 ribokinase-like domain-containing protein; PfkB domain-containing protein complement(2447132..2448082) Desulfotomaculum ruminis DSM 2154 10738811 YP_004545944.1 CDS Desru_2417 NC_015589.1 2448181 2448813 R KEGG: tpd:Teth39_1974 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(2448181..2448813) Desulfotomaculum ruminis DSM 2154 10738812 YP_004545945.1 CDS Desru_2418 NC_015589.1 2448901 2449674 R KEGG: tpd:Teth39_1975 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; transcriptional regulator IclR complement(2448901..2449674) Desulfotomaculum ruminis DSM 2154 10738813 YP_004545946.1 CDS Desru_2419 NC_015589.1 2449817 2451109 R KEGG: tpd:Teth39_1977 hypothetical protein; hypothetical protein complement(2449817..2451109) Desulfotomaculum ruminis DSM 2154 10738814 YP_004545947.1 CDS Desru_2420 NC_015589.1 2451124 2452404 R KEGG: gka:GK1972 transporter; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(2451124..2452404) Desulfotomaculum ruminis DSM 2154 10738815 YP_004545948.1 CDS Desru_2421 NC_015589.1 2452410 2452886 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vap:Vapar_3328 tripartite ATP-independent periplasmic transporter DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ complement(2452410..2452886) Desulfotomaculum ruminis DSM 2154 10738816 YP_004545949.1 CDS Desru_2422 NC_015589.1 2452948 2453982 R KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein); TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP complement(2452948..2453982) Desulfotomaculum ruminis DSM 2154 10738817 YP_004545950.1 CDS Desru_2423 NC_015589.1 2454252 2455271 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: oih:OB2815 dehydrogenase; alcohol dehydrogenase GroES domain-containing protein complement(2454252..2455271) Desulfotomaculum ruminis DSM 2154 10738818 YP_004545951.1 CDS Desru_2424 NC_015589.1 2455295 2456065 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pth:PTH_2894 dehydrogenases with different specificities; short-chain dehydrogenase/reductase SDR complement(2455295..2456065) Desulfotomaculum ruminis DSM 2154 10738819 YP_004545952.1 CDS Desru_2425 NC_015589.1 2456187 2456873 R PFAM: protein of unknown function DUF161; KEGG: aar:Acear_0727 protein of unknown function DUF161; hypothetical protein complement(2456187..2456873) Desulfotomaculum ruminis DSM 2154 10738820 YP_004545953.1 CDS Desru_2427 NC_015589.1 2463356 2464012 R KEGG: drm:Dred_1648 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like; sporulation protein YunB complement(2463356..2464012) Desulfotomaculum ruminis DSM 2154 10738827 YP_004545954.1 CDS Desru_2429 NC_015589.1 2464688 2467039 D TIGRFAM: penicillin-binding protein, 1A family; KEGG: drm:Dred_1646 1A family penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1A family 2464688..2467039 Desulfotomaculum ruminis DSM 2154 10738829 YP_004545955.1 CDS Desru_2430 NC_015589.1 2467114 2468061 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: dau:Daud_0439 hypothetical protein; hypothetical protein complement(2467114..2468061) Desulfotomaculum ruminis DSM 2154 10738830 YP_004545956.1 CDS Desru_2431 NC_015589.1 2468419 2469276 R KEGG: hmo:HM1_1691 abc transporter, permease protein, putative; ABC transporter permease complement(2468419..2469276) Desulfotomaculum ruminis DSM 2154 10738831 YP_004545957.1 CDS Desru_2432 NC_015589.1 2469270 2470229 R KEGG: hmo:HM1_1690 abc transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2469270..2470229) Desulfotomaculum ruminis DSM 2154 10738832 YP_004545958.1 CDS Desru_2433 NC_015589.1 2470263 2471387 R KEGG: hmo:HM1_1689 hypothetical protein; hypothetical protein complement(2470263..2471387) Desulfotomaculum ruminis DSM 2154 10738833 YP_004545959.1 CDS Desru_2434 NC_015589.1 2471407 2471910 R manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: dae:Dtox_1805 RNA polymerase sigma factor SigX; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 family RNA polymerase sigma factor complement(2471407..2471910) Desulfotomaculum ruminis DSM 2154 10738834 YP_004545960.1 CDS Desru_2435 NC_015589.1 2472673 2473842 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dhd:Dhaf_1751 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 2472673..2473842 Desulfotomaculum ruminis DSM 2154 10738835 YP_004545961.1 CDS Desru_2436 NC_015589.1 2474025 2475050 R PFAM: metallophosphoesterase; KEGG: drm:Dred_0745 metallophosphoesterase; metallophosphoesterase complement(2474025..2475050) Desulfotomaculum ruminis DSM 2154 10738836 YP_004545962.1 CDS Desru_2437 NC_015589.1 2475233 2475508 R PFAM: type III secretion exporter; KEGG: hmo:HM1_2194 FlhB domain protein, putative; type III secretion exporter complement(2475233..2475508) Desulfotomaculum ruminis DSM 2154 10738837 YP_004545963.1 CDS Desru_2438 NC_015589.1 2475598 2477361 R KEGG: hmo:HM1_2193 hypothetical protein; hypothetical protein complement(2475598..2477361) Desulfotomaculum ruminis DSM 2154 10738838 YP_004545964.1 CDS Desru_2439 NC_015589.1 2477532 2478044 D PFAM: superoxide dismutase copper/zinc binding; KEGG: aar:Acear_1889 superoxide dismutase copper/zinc binding protein; superoxide dismutase copper/zinc binding protein 2477532..2478044 Desulfotomaculum ruminis DSM 2154 10738839 YP_004545965.1 CDS Desru_2440 NC_015589.1 2478240 2478653 D PFAM: protein of unknown function DUF55; KEGG: rrs:RoseRS_2489 hypothetical protein; hypothetical protein 2478240..2478653 Desulfotomaculum ruminis DSM 2154 10738840 YP_004545966.1 CDS Desru_2441 NC_015589.1 2478626 2480368 R TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: drm:Dred_1642 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein CydC complement(2478626..2480368) Desulfotomaculum ruminis DSM 2154 10738841 YP_004545967.1 CDS Desru_2442 NC_015589.1 2480365 2482098 R TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: drm:Dred_1641 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein CydD complement(2480365..2482098) Desulfotomaculum ruminis DSM 2154 10738842 YP_004545968.1 CDS Desru_2443 NC_015589.1 2482223 2483227 R KEGG: drm:Dred_1640 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II complement(2482223..2483227) Desulfotomaculum ruminis DSM 2154 10738843 YP_004545969.1 CDS Desru_2444 NC_015589.1 2483218 2484606 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: drm:Dred_1639 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(2483218..2484606) Desulfotomaculum ruminis DSM 2154 10738844 YP_004545970.1 CDS Desru_2445 NC_015589.1 2484743 2485153 R KEGG: mta:Moth_2094 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Rrf2 family transcriptional regulator complement(2484743..2485153) Desulfotomaculum ruminis DSM 2154 10738845 YP_004545971.1 CDS Desru_2446 NC_015589.1 2485721 2485915 R hypothetical protein complement(2485721..2485915) Desulfotomaculum ruminis DSM 2154 10738846 YP_004545972.1 CDS Desru_2447 NC_015589.1 2486370 2486894 D KEGG: ani:AN8977.2 hypothetical protein; hypothetical protein 2486370..2486894 Desulfotomaculum ruminis DSM 2154 10738847 YP_004545973.1 CDS Desru_2448 NC_015589.1 2486912 2487598 D KEGG: tjr:TherJR_2742 hypothetical protein; hypothetical protein 2486912..2487598 Desulfotomaculum ruminis DSM 2154 10738848 YP_004545974.1 CDS Desru_2451 NC_015589.1 2491601 2493133 D KEGG: cbi:CLJ_B1962 putative surface protein; hypothetical protein 2491601..2493133 Desulfotomaculum ruminis DSM 2154 10738851 YP_004545975.1 CDS Desru_2452 NC_015589.1 2493781 2494209 D PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3937 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2493781..2494209 Desulfotomaculum ruminis DSM 2154 10738852 YP_004545976.1 CDS Desru_2454 NC_015589.1 2495923 2496144 R KEGG: smf:Smon_0577 RNA polymerase, sigma 32 subunit, RpoH; RNA polymerase sigma-32 factor RpoN complement(2495923..2496144) Desulfotomaculum ruminis DSM 2154 10738854 YP_004545977.1 CDS Desru_2456 NC_015589.1 2497289 2497774 R KEGG: lba:Lebu_2280 oxaloacetate decarboxylase; hypothetical protein complement(2497289..2497774) Desulfotomaculum ruminis DSM 2154 10738856 YP_004545978.1 CDS Desru_2457 NC_015589.1 2497836 2498609 R KEGG: cdl:CDR20291_1075 hypothetical protein; hypothetical protein complement(2497836..2498609) Desulfotomaculum ruminis DSM 2154 10738857 YP_004545979.1 CDS Desru_2460 NC_015589.1 2502966 2505317 R TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; KEGG: drm:Dred_1638 MutS2 family protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; MutS2 family protein complement(2502966..2505317) Desulfotomaculum ruminis DSM 2154 10738860 YP_004545980.1 CDS Desru_2461 NC_015589.1 2505328 2507871 R PFAM: peptidase U32; KEGG: drm:Dred_1637 peptidase U32; peptidase U32 complement(2505328..2507871) Desulfotomaculum ruminis DSM 2154 10738861 YP_004545981.1 CDS Desru_2462 NC_015589.1 2507897 2508847 R KEGG: drm:Dred_1636 hypothetical protein; hypothetical protein complement(2507897..2508847) Desulfotomaculum ruminis DSM 2154 10738862 YP_004545982.1 CDS Desru_2463 NC_015589.1 2508891 2509463 R TIGRFAM: DNA-3-methyladenine glycosylase; KEGG: drm:Dred_1635 DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); DNA-3-methyladenine glycosylase complement(2508891..2509463) Desulfotomaculum ruminis DSM 2154 10738863 YP_004545983.1 CDS Desru_2464 NC_015589.1 2509465 2511174 R KEGG: drm:Dred_1634 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; PHP domain-containing protein complement(2509465..2511174) Desulfotomaculum ruminis DSM 2154 10738864 YP_004545984.1 CDS Desru_2465 NC_015589.1 2511299 2511559 R PFAM: protein of unknown function DUF710; KEGG: drm:Dred_1633 hypothetical protein; hypothetical protein complement(2511299..2511559) Desulfotomaculum ruminis DSM 2154 10738865 YP_004545985.1 CDS Desru_2466 NC_015589.1 2511765 2512133 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mta:Moth_2476 transporter; hypothetical protein 2511765..2512133 Desulfotomaculum ruminis DSM 2154 10738866 YP_004545986.1 CDS Desru_2467 NC_015589.1 2512169 2514589 R KEGG: drm:Dred_1620 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta complement(2512169..2514589) Desulfotomaculum ruminis DSM 2154 10738867 YP_004545987.1 CDS Desru_2468 NC_015589.1 2514616 2515638 R KEGG: drm:Dred_1619 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha complement(2514616..2515638) Desulfotomaculum ruminis DSM 2154 10738868 YP_004545988.1 CDS Desru_2469 NC_015589.1 2516147 2516944 R PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: drm:Dred_1618 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(2516147..2516944) Desulfotomaculum ruminis DSM 2154 10738869 YP_004545989.1 CDS Desru_2470 NC_015589.1 2516941 2517594 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: drm:Dred_1617 TrkA domain-containing protein; TrkA-N domain-containing protein complement(2516941..2517594) Desulfotomaculum ruminis DSM 2154 10738870 YP_004545990.1 CDS Desru_2471 NC_015589.1 2517610 2518944 R TIGRFAM: potassium uptake protein, TrkH family; KEGG: drm:Dred_1616 TrkH family potassium uptake protein; PFAM: cation transporter; potassium uptake protein TrkH family complement(2517610..2518944) Desulfotomaculum ruminis DSM 2154 10738871 YP_004545991.1 CDS Desru_2472 NC_015589.1 2519084 2519440 R KEGG: drm:Dred_1615 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 complement(2519084..2519440) Desulfotomaculum ruminis DSM 2154 10738872 YP_004545992.1 CDS Desru_2473 NC_015589.1 2519482 2519676 R KEGG: drm:Dred_1614 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 complement(2519482..2519676) Desulfotomaculum ruminis DSM 2154 10738873 YP_004545993.1 CDS Desru_2474 NC_015589.1 2519692 2520162 R KEGG: drm:Dred_1613 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; translation initiation factor IF-3 complement(2519692..2520162) Desulfotomaculum ruminis DSM 2154 10738874 YP_004545994.1 CDS Desru_2475 NC_015589.1 2520462 2522372 R KEGG: drm:Dred_1612 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; threonyl-tRNA synthetase complement(2520462..2522372) Desulfotomaculum ruminis DSM 2154 10738875 YP_004545995.1 CDS Desru_2476 NC_015589.1 2522682 2523290 R PFAM: protein of unknown function DUF445; KEGG: drm:Dred_1611 hypothetical protein; hypothetical protein complement(2522682..2523290) Desulfotomaculum ruminis DSM 2154 10738876 YP_004545996.1 CDS Desru_2477 NC_015589.1 2523450 2524355 R KEGG: drm:Dred_1610 hypothetical protein; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC; sporulation protein YtxC complement(2523450..2524355) Desulfotomaculum ruminis DSM 2154 10738877 YP_004545997.1 CDS Desru_2478 NC_015589.1 2524739 2524999 D KEGG: drm:Dred_1609 hypothetical protein; hypothetical protein 2524739..2524999 Desulfotomaculum ruminis DSM 2154 10738878 YP_004545998.1 CDS Desru_2479 NC_015589.1 2525621 2526451 D KEGG: pth:PTH_2035 periplasmic serine proteases; serine protease 2525621..2526451 Desulfotomaculum ruminis DSM 2154 10738879 YP_004545999.1 CDS Desru_2480 NC_015589.1 2526596 2527183 D KEGG: nth:Nther_2058 hypothetical protein; hypothetical protein 2526596..2527183 Desulfotomaculum ruminis DSM 2154 10738880 YP_004546000.1 CDS Desru_2481 NC_015589.1 2527327 2527698 D KEGG: drm:Dred_2836 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 2527327..2527698 Desulfotomaculum ruminis DSM 2154 10738881 YP_004546001.1 CDS Desru_2482 NC_015589.1 2527824 2529572 D TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; KEGG: drm:Dred_2835 putative PAS/PAC sensor protein; SMART: AAA ATPase; CBS domain containing protein; PAS sensor protein 2527824..2529572 Desulfotomaculum ruminis DSM 2154 10738882 YP_004546002.1 CDS Desru_2483 NC_015589.1 2529942 2531573 D PFAM: Na+/solute symporter; KEGG: drm:Dred_2834 Na+/solute symporter; Na+/solute symporter 2529942..2531573 Desulfotomaculum ruminis DSM 2154 10738883 YP_004546003.1 CDS Desru_2484 NC_015589.1 2531608 2532060 D PFAM: OsmC family protein; KEGG: drm:Dred_2833 OsmC family protein; OsmC family protein 2531608..2532060 Desulfotomaculum ruminis DSM 2154 10738884 YP_004546004.1 CDS Desru_2485 NC_015589.1 2532089 2533486 D KEGG: drm:Dred_2832 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase 2532089..2533486 Desulfotomaculum ruminis DSM 2154 10738885 YP_004546005.1 CDS Desru_2486 NC_015589.1 2533693 2533806 D KEGG: cbe:Cbei_1888 ground-like protein; hypothetical protein 2533693..2533806 Desulfotomaculum ruminis DSM 2154 10738886 YP_004546006.1 CDS Desru_2487 NC_015589.1 2533940 2534119 R KEGG: tet:TTHERM_00316330 Protein phosphatase 2C containing protein; hypothetical protein complement(2533940..2534119) Desulfotomaculum ruminis DSM 2154 10738887 YP_004546007.1 CDS Desru_2489 NC_015589.1 2534833 2535819 D KEGG: mbu:Mbur_1752 hypothetical protein; hypothetical protein 2534833..2535819 Desulfotomaculum ruminis DSM 2154 10738889 YP_004546008.1 CDS Desru_2490 NC_015589.1 2535841 2536899 D KEGG: fno:Fnod_0753 nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein); nuclease 2535841..2536899 Desulfotomaculum ruminis DSM 2154 10738890 YP_004546009.1 CDS Desru_2492 NC_015589.1 2537344 2537556 R KEGG: ton:TON_0715 hypothetical protein; hypothetical protein complement(2537344..2537556) Desulfotomaculum ruminis DSM 2154 10738893 YP_004546010.1 CDS Desru_2493 NC_015589.1 2537988 2539148 R KEGG: drm:Dred_1606 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase complement(2537988..2539148) Desulfotomaculum ruminis DSM 2154 10738894 YP_004546011.1 CDS Desru_2494 NC_015589.1 2539293 2540039 D KEGG: drm:Dred_1605 polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; polysaccharide deacetylase family sporulation protein PdaB 2539293..2540039 Desulfotomaculum ruminis DSM 2154 10738895 YP_004546012.1 CDS Desru_2495 NC_015589.1 2540114 2541346 R KEGG: pth:PTH_0666 signaling protein; PFAM: EAL domain protein; SMART: EAL domain protein; EAL domain-containing protein complement(2540114..2541346) Desulfotomaculum ruminis DSM 2154 10738896 YP_004546013.1 CDS Desru_2496 NC_015589.1 2541618 2542316 D PFAM: SNARE associated Golgi protein; KEGG: drm:Dred_1602 hypothetical protein; hypothetical protein 2541618..2542316 Desulfotomaculum ruminis DSM 2154 10738897 YP_004546014.1 CDS Desru_2497 NC_015589.1 2542340 2542957 R PFAM: SNARE associated Golgi protein; KEGG: drm:Dred_1601 hypothetical protein; hypothetical protein complement(2542340..2542957) Desulfotomaculum ruminis DSM 2154 10738898 YP_004546015.1 CDS Desru_2498 NC_015589.1 2543108 2544526 R TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1600 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(2543108..2544526) Desulfotomaculum ruminis DSM 2154 10738899 YP_004546016.1 CDS Desru_2499 NC_015589.1 2544706 2547342 D TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: drm:Dred_1599 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; DNA polymerase I 2544706..2547342 Desulfotomaculum ruminis DSM 2154 10738900 YP_004546017.1 CDS Desru_2500 NC_015589.1 2547371 2548204 D TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: drm:Dred_1598 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase 2547371..2548204 Desulfotomaculum ruminis DSM 2154 10738901 YP_004546018.1 CDS Desru_2501 NC_015589.1 2548274 2548912 D KEGG: drm:Dred_1597 hypothetical protein; TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204; sporulation protein YtaF 2548274..2548912 Desulfotomaculum ruminis DSM 2154 10738902 YP_004546019.1 CDS Desru_2502 NC_015589.1 2548938 2549564 D TIGRFAM: dephospho-CoA kinase; KEGG: drm:Dred_1596 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 2548938..2549564 Desulfotomaculum ruminis DSM 2154 10738903 YP_004546020.1 CDS Desru_2503 NC_015589.1 2549598 2550215 D PFAM: Lytic transglycosylase catalytic; KEGG: drm:Dred_1595 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 2549598..2550215 Desulfotomaculum ruminis DSM 2154 10738904 YP_004546021.1 CDS Desru_2504 NC_015589.1 2550376 2550942 R PFAM: regulatory protein TetR; KEGG: drm:Dred_1590 TetR family transcriptional regulator; regulatory protein TetR complement(2550376..2550942) Desulfotomaculum ruminis DSM 2154 10738905 YP_004546022.1 CDS Desru_2505 NC_015589.1 2550969 2552078 R KEGG: drm:Dred_1589 ABC-2 type transporter; manually curated; PFAM: ABC-2 type transporter; ABC transporter complement(2550969..2552078) Desulfotomaculum ruminis DSM 2154 10738906 YP_004546023.1 CDS Desru_2506 NC_015589.1 2552071 2552994 R KEGG: drm:Dred_1588 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2552071..2552994) Desulfotomaculum ruminis DSM 2154 10738907 YP_004546024.1 CDS Desru_2507 NC_015589.1 2552994 2553899 R KEGG: drm:Dred_1587 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2552994..2553899) Desulfotomaculum ruminis DSM 2154 10738908 YP_004546025.1 CDS Desru_2508 NC_015589.1 2553911 2554885 R PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_1586 secretion protein HlyD family protein; secretion protein HlyD family protein complement(2553911..2554885) Desulfotomaculum ruminis DSM 2154 10738909 YP_004546026.1 CDS Desru_2509 NC_015589.1 2555101 2556813 D KEGG: drm:Dred_1585 putative PAS/PAC sensor protein; PFAM: PAS fold domain protein; Fe-S cluster domain protein; SMART: PAS domain containing protein; PAS fold domain-containing protein 2555101..2556813 Desulfotomaculum ruminis DSM 2154 10738910 YP_004546027.1 CDS Desru_2510 NC_015589.1 2556837 2557988 D KEGG: drm:Dred_1584 stage II sporulation E family protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; Stage II sporulation protein E 2556837..2557988 Desulfotomaculum ruminis DSM 2154 10738911 YP_004546028.1 CDS Desru_2511 NC_015589.1 2558035 2558424 R KEGG: mev:Metev_2155 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein; 4Fe-4S ferredoxin complement(2558035..2558424) Desulfotomaculum ruminis DSM 2154 10738912 YP_004546029.1 CDS Desru_2512 NC_015589.1 2558981 2559313 D KEGG: dae:Dtox_2420 integrase family protein; hypothetical protein 2558981..2559313 Desulfotomaculum ruminis DSM 2154 10738914 YP_004546030.1 CDS Desru_2513 NC_015589.1 2559486 2560319 D KEGG: dhd:Dhaf_2561 beta-lactamase domain protein; beta-lactamase domain-containing protein 2559486..2560319 Desulfotomaculum ruminis DSM 2154 10738915 YP_004546031.1 CDS Desru_2514 NC_015589.1 2560684 2560902 D KEGG: amt:Amet_4273 hypothetical protein; hypothetical protein 2560684..2560902 Desulfotomaculum ruminis DSM 2154 10738916 YP_004546032.1 CDS Desru_2515 NC_015589.1 2560904 2561215 D PFAM: Coat F domain protein; KEGG: ccb:Clocel_0868 coat F domain-containing protein; Coat F domain-containing protein 2560904..2561215 Desulfotomaculum ruminis DSM 2154 10738917 YP_004546033.1 CDS Desru_2517 NC_015589.1 2562124 2562936 D KEGG: amt:Amet_4659 hypothetical protein; hypothetical protein 2562124..2562936 Desulfotomaculum ruminis DSM 2154 10738919 YP_004546034.1 CDS Desru_2518 NC_015589.1 2564583 2564867 R KEGG: drm:Dred_0115 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(2564583..2564867) Desulfotomaculum ruminis DSM 2154 10738920 YP_004546035.1 CDS Desru_2521 NC_015589.1 2567088 2567477 R KEGG: dae:Dtox_3726 hypothetical protein; hypothetical protein complement(2567088..2567477) Desulfotomaculum ruminis DSM 2154 10738923 YP_004546036.1 CDS Desru_2522 NC_015589.1 2567869 2568255 R KEGG: dae:Dtox_3723 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2567869..2568255) Desulfotomaculum ruminis DSM 2154 10738924 YP_004546037.1 CDS Desru_2523 NC_015589.1 2568566 2569942 R KEGG: gka:GK3304 mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase complement(2568566..2569942) Desulfotomaculum ruminis DSM 2154 10738925 YP_004546038.1 CDS Desru_2524 NC_015589.1 2570017 2572086 R PFAM: glycosyl transferase family 2; KEGG: nca:Noca_0721 general secretion pathway protein E; family 2 glycosyl transferase complement(2570017..2572086) Desulfotomaculum ruminis DSM 2154 10738926 YP_004546039.1 CDS Desru_2525 NC_015589.1 2572102 2573049 R PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_3097 glycosyl transferase family protein; family 2 glycosyl transferase complement(2572102..2573049) Desulfotomaculum ruminis DSM 2154 10738927 YP_004546040.1 CDS Desru_2526 NC_015589.1 2573049 2574671 R KEGG: mgi:Mflv_0209 hypothetical protein; hypothetical protein complement(2573049..2574671) Desulfotomaculum ruminis DSM 2154 10738928 YP_004546041.1 CDS Desru_2527 NC_015589.1 2575117 2577531 R TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: drm:Dred_0974 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase III complement(2575117..2577531) Desulfotomaculum ruminis DSM 2154 10738929 YP_004546042.1 CDS Desru_2528 NC_015589.1 2577893 2579023 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ccb:Clocel_3267 alcohol dehydrogenase GroES domain-containing protein; alcohol dehydrogenase GroES domain-containing protein 2577893..2579023 Desulfotomaculum ruminis DSM 2154 10738930 YP_004546043.1 CDS Desru_2529 NC_015589.1 2579013 2579474 R PFAM: GCN5-related N-acetyltransferase; KEGG: bcu:BCAH820_1901 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(2579013..2579474) Desulfotomaculum ruminis DSM 2154 10738931 YP_004546044.1 CDS Desru_2530 NC_015589.1 2579837 2580106 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pth:PTH_0095 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2579837..2580106 Desulfotomaculum ruminis DSM 2154 10738932 YP_004546045.1 CDS Desru_2531 NC_015589.1 2580417 2580860 D PFAM: heat shock protein Hsp20; KEGG: gwc:GWCH70_2078 heat shock protein HSP20; heat shock protein Hsp20 2580417..2580860 Desulfotomaculum ruminis DSM 2154 10738933 YP_004546046.1 CDS Desru_2532 NC_015589.1 2581256 2582158 D PFAM: regulatory protein LysR; KEGG: gym:GYMC10_4684 transcriptional regulator, LysR family; regulatory protein LysR 2581256..2582158 Desulfotomaculum ruminis DSM 2154 10738934 YP_004546047.1 CDS Desru_2533 NC_015589.1 2582278 2583414 D PFAM: Methionine synthase vitamin-B12 independent; KEGG: cbe:Cbei_2330 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 2582278..2583414 Desulfotomaculum ruminis DSM 2154 10738935 YP_004546048.1 CDS Desru_2534 NC_015589.1 2583644 2584747 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: vap:Vapar_5519 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(2583644..2584747) Desulfotomaculum ruminis DSM 2154 10738936 YP_004546049.1 CDS Desru_2535 NC_015589.1 2584946 2585518 R PFAM: Collagen triple helix repeat-containing protein; KEGG: dhd:Dhaf_1008 collagen triple helix repeat protein; collagen triple helix repeat-containing protein complement(2584946..2585518) Desulfotomaculum ruminis DSM 2154 10738937 YP_004546050.1 CDS Desru_2536 NC_015589.1 2585871 2586842 D KEGG: cce:Ccel_3349 hypothetical protein; hypothetical protein 2585871..2586842 Desulfotomaculum ruminis DSM 2154 10738938 YP_004546051.1 CDS Desru_2537 NC_015589.1 2587231 2587644 D PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: dhd:Dhaf_4883 GreA/GreB family elongation factor; transcription elongation factor GreA/GreB domain-containing protein 2587231..2587644 Desulfotomaculum ruminis DSM 2154 10738939 YP_004546052.1 CDS Desru_2538 NC_015589.1 2587793 2588635 D PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein 2587793..2588635 Desulfotomaculum ruminis DSM 2154 10738940 YP_004546053.1 CDS Desru_2539 NC_015589.1 2588859 2590247 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; chemotaxis sensory transducer; KEGG: bpu:BPUM_3598 sensor histidine kinase; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS sensor protein 2588859..2590247 Desulfotomaculum ruminis DSM 2154 10738941 YP_004546054.1 CDS Desru_2540 NC_015589.1 2590486 2591340 D PFAM: alpha/beta hydrolase fold; KEGG: dsy:DSY3823 hypothetical protein; alpha/beta hydrolase fold protein 2590486..2591340 Desulfotomaculum ruminis DSM 2154 10738942 YP_004546055.1 CDS Desru_2541 NC_015589.1 2591407 2592543 R KEGG: tit:Thit_0239 dehydrogenase (flavoprotein)-like protein; dehydrogenase (flavoprotein)-like protein complement(2591407..2592543) Desulfotomaculum ruminis DSM 2154 10738943 YP_004546056.1 CDS Desru_2542 NC_015589.1 2592773 2593363 D KEGG: gyc:GYMC61_2560 hypothetical protein; hypothetical protein 2592773..2593363 Desulfotomaculum ruminis DSM 2154 10738944 YP_004546057.1 CDS Desru_2543 NC_015589.1 2593776 2594486 D TIGRFAM: Exosporium BclB-like; KEGG: aac:Aaci_2505 collagen triple helix repeat protein; exosporium BclB-like protein 2593776..2594486 Desulfotomaculum ruminis DSM 2154 10738945 YP_004546058.1 CDS Desru_2544 NC_015589.1 2594565 2595629 D PFAM: glycosyl transferase family 2; KEGG: amt:Amet_3406 glycosyl transferase family protein; family 2 glycosyl transferase 2594565..2595629 Desulfotomaculum ruminis DSM 2154 10738946 YP_004546059.1 CDS Desru_2545 NC_015589.1 2595849 2596325 D KEGG: pth:PTH_2524 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 2595849..2596325 Desulfotomaculum ruminis DSM 2154 10738947 YP_004546060.1 CDS Desru_2546 NC_015589.1 2596330 2597898 R KEGG: pth:PTH_2525 hypothetical protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter complement(2596330..2597898) Desulfotomaculum ruminis DSM 2154 10738948 YP_004546061.1 CDS Desru_2547 NC_015589.1 2598112 2598765 D PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_0454 secretion protein HlyD; secretion protein HlyD family protein 2598112..2598765 Desulfotomaculum ruminis DSM 2154 10738949 YP_004546062.1 CDS Desru_2548 NC_015589.1 2598971 2600773 D KEGG: hmo:HM1_3095 secretion protein HlyD, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2598971..2600773 Desulfotomaculum ruminis DSM 2154 10738950 YP_004546063.1 CDS Desru_2549 NC_015589.1 2600774 2601496 D KEGG: bbe:BBR47_15070 probable ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2600774..2601496 Desulfotomaculum ruminis DSM 2154 10738951 YP_004546064.1 CDS Desru_2550 NC_015589.1 2601493 2602710 D PFAM: protein of unknown function DUF214; KEGG: hmo:HM1_3093 hypothetical protein; hypothetical protein 2601493..2602710 Desulfotomaculum ruminis DSM 2154 10738952 YP_004546065.1 CDS Desru_2551 NC_015589.1 2602831 2603520 R KEGG: pjd:Pjdr2_2128 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(2602831..2603520) Desulfotomaculum ruminis DSM 2154 10738953 YP_004546066.1 CDS Desru_2553 NC_015589.1 2604118 2604603 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dhd:Dhaf_3778 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(2604118..2604603) Desulfotomaculum ruminis DSM 2154 10738955 YP_004546067.1 CDS Desru_2554 NC_015589.1 2605142 2605774 D PFAM: Nitrogenase iron-iron accessory protein AnfO; KEGG: drm:Dred_2813 hypothetical protein; nitrogenase iron-iron accessory protein AnfO 2605142..2605774 Desulfotomaculum ruminis DSM 2154 10738956 YP_004546068.1 CDS Desru_2555 NC_015589.1 2605850 2606794 D KEGG: rsh:Rsph17029_3733 integrase catalytic subunit; hypothetical protein 2605850..2606794 Desulfotomaculum ruminis DSM 2154 10738957 YP_004546069.1 CDS Desru_2556 NC_015589.1 2606915 2607037 D hypothetical protein 2606915..2607037 Desulfotomaculum ruminis DSM 2154 10738958 YP_004546070.1 CDS Desru_2557 NC_015589.1 2607603 2608349 D PFAM: Silent information regulator protein Sir2; KEGG: drm:Dred_2032 silent information regulator protein Sir2; silent information regulator protein Sir2 2607603..2608349 Desulfotomaculum ruminis DSM 2154 10738959 YP_004546071.1 CDS Desru_2558 NC_015589.1 2608385 2608543 R hypothetical protein complement(2608385..2608543) Desulfotomaculum ruminis DSM 2154 10738960 YP_004546072.1 CDS Desru_2559 NC_015589.1 2608871 2609173 R KEGG: drm:Dred_1474 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(2608871..2609173) Desulfotomaculum ruminis DSM 2154 10738961 YP_004546073.1 CDS Desru_2560 NC_015589.1 2609563 2610858 D KEGG: drm:Dred_1473 ABC-type sugar transport system periplasmic component-like protein; sugar ABC transporter periplasmic protein 2609563..2610858 Desulfotomaculum ruminis DSM 2154 10738962 YP_004546074.1 CDS Desru_2561 NC_015589.1 2610926 2611459 R KEGG: dau:Daud_0314 appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; Appr-1-p processing protein complement(2610926..2611459) Desulfotomaculum ruminis DSM 2154 10738963 YP_004546075.1 CDS Desru_2562 NC_015589.1 2611485 2611886 R PFAM: protein of unknown function UPF0047; KEGG: rci:RCIX1907 hypothetical protein; hypothetical protein complement(2611485..2611886) Desulfotomaculum ruminis DSM 2154 10738964 YP_004546076.1 CDS Desru_2563 NC_015589.1 2612010 2613857 R PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; KEGG: drm:Dred_1472 heat shock protein 90; Heat shock protein Hsp90-like protein complement(2612010..2613857) Desulfotomaculum ruminis DSM 2154 10738965 YP_004546077.1 CDS Desru_2564 NC_015589.1 2613971 2615152 R KEGG: chy:CHY_2436 putative lipoprotein protein; hypothetical protein complement(2613971..2615152) Desulfotomaculum ruminis DSM 2154 10738966 YP_004546078.1 CDS Desru_2565 NC_015589.1 2615168 2616280 R KEGG: drm:Dred_2666 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; germination protein Ger(x)C family complement(2615168..2616280) Desulfotomaculum ruminis DSM 2154 10738967 YP_004546079.1 CDS Desru_2566 NC_015589.1 2616273 2617367 R KEGG: drm:Dred_2664 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein complement(2616273..2617367) Desulfotomaculum ruminis DSM 2154 10738968 YP_004546080.1 CDS Desru_2567 NC_015589.1 2617357 2618925 R PFAM: GerA spore germination protein; KEGG: drm:Dred_2663 GerA spore germination protein; GerA spore germination protein complement(2617357..2618925) Desulfotomaculum ruminis DSM 2154 10738969 YP_004546081.1 CDS Desru_2568 NC_015589.1 2619282 2620559 D PFAM: Citrate transporter; KEGG: drm:Dred_1471 citrate transporter; citrate transporter 2619282..2620559 Desulfotomaculum ruminis DSM 2154 10738970 YP_004546082.1 CDS Desru_2569 NC_015589.1 2620615 2620842 R KEGG: deg:DehalGT_1378 hypothetical protein; hypothetical protein complement(2620615..2620842) Desulfotomaculum ruminis DSM 2154 10738971 YP_004546083.1 CDS Desru_2570 NC_015589.1 2620882 2621550 R KEGG: det:DET1581 anti-oxidant AhpCTSA family protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; peroxiredoxin complement(2620882..2621550) Desulfotomaculum ruminis DSM 2154 10738972 YP_004546084.1 CDS Desru_2571 NC_015589.1 2621643 2622065 R PFAM: NUDIX hydrolase; KEGG: spe:Spro_3231 NUDIX hydrolase; NUDIX hydrolase complement(2621643..2622065) Desulfotomaculum ruminis DSM 2154 10738973 YP_004546085.1 CDS Desru_2572 NC_015589.1 2622217 2622597 R KEGG: drm:Dred_1470 hypothetical protein; hypothetical protein complement(2622217..2622597) Desulfotomaculum ruminis DSM 2154 10738974 YP_004546086.1 CDS Desru_2573 NC_015589.1 2622636 2623316 R PFAM: protein of unknown function DUF421; KEGG: drm:Dred_1469 hypothetical protein; hypothetical protein complement(2622636..2623316) Desulfotomaculum ruminis DSM 2154 10738975 YP_004546087.1 CDS Desru_2574 NC_015589.1 2623494 2623700 D PFAM: protein of unknown function DUF1657; KEGG: aac:Aaci_0718 protein of unknown function DUF1657; hypothetical protein 2623494..2623700 Desulfotomaculum ruminis DSM 2154 10738976 YP_004546088.1 CDS Desru_2575 NC_015589.1 2623770 2623976 D PFAM: protein of unknown function DUF1657; KEGG: drm:Dred_1467 hypothetical protein; hypothetical protein 2623770..2623976 Desulfotomaculum ruminis DSM 2154 10738977 YP_004546089.1 CDS Desru_2576 NC_015589.1 2624000 2624860 D PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: drm:Dred_1466 hypothetical protein; hypothetical protein 2624000..2624860 Desulfotomaculum ruminis DSM 2154 10738978 YP_004546090.1 CDS Desru_2577 NC_015589.1 2624873 2625349 D KEGG: drm:Dred_1465 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; stage V sporulation protein AC 2624873..2625349 Desulfotomaculum ruminis DSM 2154 10738979 YP_004546091.1 CDS Desru_2578 NC_015589.1 2625351 2626358 D KEGG: drm:Dred_1464 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; stage V sporulation protein AD 2625351..2626358 Desulfotomaculum ruminis DSM 2154 10738980 YP_004546092.1 CDS Desru_2579 NC_015589.1 2626371 2626724 D KEGG: drm:Dred_1463 SpoVA protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; stage V sporulation protein AE 2626371..2626724 Desulfotomaculum ruminis DSM 2154 10738981 YP_004546093.1 CDS Desru_2580 NC_015589.1 2626741 2627184 D PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: drm:Dred_1462 hypothetical protein; sporulation lipoprotein YhcN/YlaJ-like protein 2626741..2627184 Desulfotomaculum ruminis DSM 2154 10738982 YP_004546094.1 CDS Desru_2581 NC_015589.1 2627290 2627799 D PFAM: Restriction endonuclease BglII; KEGG: drm:Dred_1461 hypothetical protein; Restriction endonuclease BglII 2627290..2627799 Desulfotomaculum ruminis DSM 2154 10738983 YP_004546095.1 CDS Desru_2582 NC_015589.1 2627915 2629822 D KEGG: drm:Dred_1460 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 2627915..2629822 Desulfotomaculum ruminis DSM 2154 10738984 YP_004546096.1 CDS Desru_2583 NC_015589.1 2629958 2631481 R TIGRFAM: 4-alpha-glucanotransferase; KEGG: drm:Dred_1459 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase complement(2629958..2631481) Desulfotomaculum ruminis DSM 2154 10738985 YP_004546097.1 CDS Desru_2584 NC_015589.1 2631471 2633441 R KEGG: drm:Dred_1458 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(2631471..2633441) Desulfotomaculum ruminis DSM 2154 10738986 YP_004546098.1 CDS Desru_2585 NC_015589.1 2633482 2634915 R TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: drm:Dred_1457 glycogen/starch synthases, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; glycogen/starch synthase ADP-glucose type complement(2633482..2634915) Desulfotomaculum ruminis DSM 2154 10738987 YP_004546099.1 CDS Desru_2586 NC_015589.1 2634936 2636051 R TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: drm:Dred_1456 glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase complement(2634936..2636051) Desulfotomaculum ruminis DSM 2154 10738988 YP_004546100.1 CDS Desru_2587 NC_015589.1 2636097 2637308 R KEGG: drm:Dred_1455 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase complement(2636097..2637308) Desulfotomaculum ruminis DSM 2154 10738989 YP_004546101.1 CDS Desru_2588 NC_015589.1 2637365 2639314 R TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: drm:Dred_1453 1,4-alpha-glucan branching enzyme; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan-branching protein complement(2637365..2639314) Desulfotomaculum ruminis DSM 2154 10738990 YP_004546102.1 CDS Desru_2589 NC_015589.1 2639469 2640308 R KEGG: dau:Daud_1904 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Prephenate dehydratase complement(2639469..2640308) Desulfotomaculum ruminis DSM 2154 10738991 YP_004546103.1 CDS Desru_2590 NC_015589.1 2640699 2640866 R KEGG: dhd:Dhaf_0246 hypothetical protein; hypothetical protein complement(2640699..2640866) Desulfotomaculum ruminis DSM 2154 10738992 YP_004546104.1 CDS Desru_2591 NC_015589.1 2640889 2642379 R PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1452 hypothetical protein; hypothetical protein complement(2640889..2642379) Desulfotomaculum ruminis DSM 2154 10738993 YP_004546105.1 CDS Desru_2592 NC_015589.1 2642899 2644275 R KEGG: pth:PTH_0667 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(2642899..2644275) Desulfotomaculum ruminis DSM 2154 10738994 YP_004546106.1 CDS Desru_2593 NC_015589.1 2644544 2645641 D KEGG: drm:Dred_1451 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein 2644544..2645641 Desulfotomaculum ruminis DSM 2154 10738995 YP_004546107.1 CDS Desru_2594 NC_015589.1 2645741 2646394 D PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: drm:Dred_1450 di-trans,poly-cis-decaprenylcistransferase; Di-trans-poly-cis-decaprenylcistransferase 2645741..2646394 Desulfotomaculum ruminis DSM 2154 10738996 YP_004546108.1 CDS Desru_2595 NC_015589.1 2646658 2647869 D KEGG: drm:Dred_1447 hypothetical protein; hypothetical protein 2646658..2647869 Desulfotomaculum ruminis DSM 2154 10738997 YP_004546109.1 CDS Desru_2596 NC_015589.1 2647917 2649545 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1446 hypothetical protein; hypothetical protein complement(2647917..2649545) Desulfotomaculum ruminis DSM 2154 10738998 YP_004546110.1 CDS Desru_2597 NC_015589.1 2649576 2650487 R PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_1445 nitrate reductase, gamma subunit; nitrate reductase subunit gamma complement(2649576..2650487) Desulfotomaculum ruminis DSM 2154 10738999 YP_004546111.1 CDS Desru_2598 NC_015589.1 2651222 2651884 R PFAM: O-methyltransferase family 3; KEGG: drm:Dred_1444 O-methyltransferase family protein; O-methyltransferase family protein complement(2651222..2651884) Desulfotomaculum ruminis DSM 2154 10739000 YP_004546112.1 CDS Desru_2599 NC_015589.1 2652086 2652982 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: drm:Dred_1443 LysR family transcriptional regulator; LysR substrate-binding protein 2652086..2652982 Desulfotomaculum ruminis DSM 2154 10739001 YP_004546113.1 CDS Desru_2600 NC_015589.1 2653488 2655053 D TIGRFAM: hydrogenase, Fe-only; KEGG: drm:Dred_0463 hydrogenases, Fe-only; PFAM: hydrogenase large subunit domain protein; Twin-arginine translocation pathway, signal sequence, subgroup; iron hydrogenase small subunit; hydrogenase Fe-only 2653488..2655053 Desulfotomaculum ruminis DSM 2154 10739002 YP_004546114.1 CDS Desru_2601 NC_015589.1 2655071 2655856 D KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 2655071..2655856 Desulfotomaculum ruminis DSM 2154 10739003 YP_004546115.1 CDS Desru_2602 NC_015589.1 2655906 2657036 D PFAM: Polysulphide reductase NrfD; KEGG: drm:Dred_1116 polysulphide reductase, NrfD; polysulfide reductase NrfD 2655906..2657036 Desulfotomaculum ruminis DSM 2154 10739004 YP_004546116.1 CDS Desru_2603 NC_015589.1 2657307 2658146 R PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_1442 hypothetical protein; hypothetical protein complement(2657307..2658146) Desulfotomaculum ruminis DSM 2154 10739005 YP_004546117.1 CDS Desru_2604 NC_015589.1 2658393 2658605 D KEGG: tbr:Tb927.8.6700 hypothetical protein; hypothetical protein 2658393..2658605 Desulfotomaculum ruminis DSM 2154 10739006 YP_004546118.1 CDS Desru_2605 NC_015589.1 2658757 2658999 D KEGG: drm:Dred_1441 hypothetical protein; hypothetical protein 2658757..2658999 Desulfotomaculum ruminis DSM 2154 10739007 YP_004546119.1 CDS Desru_2606 NC_015589.1 2659011 2660306 R KEGG: drm:Dred_1440 hydrogenase large subunit; PFAM: hydrogenase large subunit domain protein; ferredoxin hydrogenase complement(2659011..2660306) Desulfotomaculum ruminis DSM 2154 10739008 YP_004546120.1 CDS Desru_2607 NC_015589.1 2660440 2660868 R KEGG: drm:Dred_1439 hypothetical protein; hypothetical protein complement(2660440..2660868) Desulfotomaculum ruminis DSM 2154 10739009 YP_004546121.1 CDS Desru_2608 NC_015589.1 2660974 2662218 R PFAM: HI0933 family protein; KEGG: drm:Dred_1437 hypothetical protein; hypothetical protein complement(2660974..2662218) Desulfotomaculum ruminis DSM 2154 10739010 YP_004546122.1 CDS Desru_2609 NC_015589.1 2662211 2663827 R PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1436 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2662211..2663827) Desulfotomaculum ruminis DSM 2154 10739011 YP_004546123.1 CDS Desru_2610 NC_015589.1 2664135 2664308 D KEGG: acn:ACIS_00404 carbamoyl phosphate synthase large subunit; hypothetical protein 2664135..2664308 Desulfotomaculum ruminis DSM 2154 10739012 YP_004546124.1 CDS Desru_2611 NC_015589.1 2664466 2665053 R KEGG: mac:MA0513 maltose O-acetyltransferase; maltose O-acetyltransferase complement(2664466..2665053) Desulfotomaculum ruminis DSM 2154 10739013 YP_004546125.1 CDS Desru_2612 NC_015589.1 2665185 2665463 D PFAM: Excinuclease ABC C subunit domain protein; KEGG: drm:Dred_1435 excinuclease ABC subunit C; excinuclease ABC C subunit domain-containing protein 2665185..2665463 Desulfotomaculum ruminis DSM 2154 10739014 YP_004546126.1 CDS Desru_2613 NC_015589.1 2665508 2666344 R KEGG: drm:Dred_1434 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein complement(2665508..2666344) Desulfotomaculum ruminis DSM 2154 10739015 YP_004546127.1 CDS Desru_2614 NC_015589.1 2666619 2666750 D hypothetical protein 2666619..2666750 Desulfotomaculum ruminis DSM 2154 10739016 YP_004546128.1 CDS Desru_2615 NC_015589.1 2666804 2667586 R PFAM: nitroreductase; KEGG: aar:Acear_1505 nitroreductase; nitroreductase complement(2666804..2667586) Desulfotomaculum ruminis DSM 2154 10739017 YP_004546129.1 CDS Desru_2616 NC_015589.1 2667639 2669144 R KEGG: dhd:Dhaf_3314 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein complement(2667639..2669144) Desulfotomaculum ruminis DSM 2154 10739018 YP_004546130.1 CDS Desru_2617 NC_015589.1 2669160 2669690 R PFAM: protein of unknown function DUF107; KEGG: dhd:Dhaf_3316 protein of unknown function DUF107; hypothetical protein complement(2669160..2669690) Desulfotomaculum ruminis DSM 2154 10739019 YP_004546131.1 CDS Desru_2618 NC_015589.1 2669746 2670426 R PFAM: PspA/IM30 family protein; KEGG: dhd:Dhaf_3317 phage shock protein A, PspA; PspA/IM30 family protein complement(2669746..2670426) Desulfotomaculum ruminis DSM 2154 10739020 YP_004546132.1 CDS Desru_2619 NC_015589.1 2670642 2671859 R PFAM: major facilitator superfamily MFS_1; KEGG: dae:Dtox_3789 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2670642..2671859) Desulfotomaculum ruminis DSM 2154 10739021 YP_004546133.1 CDS Desru_2621 NC_015589.1 2673418 2674602 R PFAM: major facilitator superfamily MFS_1; KEGG: lsp:Bsph_1900 putative transport protein; major facilitator superfamily protein complement(2673418..2674602) Desulfotomaculum ruminis DSM 2154 10739023 YP_004546134.1 CDS Desru_2622 NC_015589.1 2674759 2676672 D KEGG: drm:Dred_1432 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2674759..2676672 Desulfotomaculum ruminis DSM 2154 10739024 YP_004546135.1 CDS Desru_2623 NC_015589.1 2676926 2677414 D KEGG: drm:Dred_1607 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 2676926..2677414 Desulfotomaculum ruminis DSM 2154 10739025 YP_004546136.1 CDS Desru_2624 NC_015589.1 2677456 2678067 R PFAM: NERD domain protein; KEGG: chy:CHY_1343 putative serine/threonine protein kinase; NERD domain-containing protein complement(2677456..2678067) Desulfotomaculum ruminis DSM 2154 10739026 YP_004546137.1 CDS Desru_2625 NC_015589.1 2678329 2679084 R KEGG: drm:Dred_1430 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(2678329..2679084) Desulfotomaculum ruminis DSM 2154 10739027 YP_004546138.1 CDS Desru_2626 NC_015589.1 2679150 2680448 R KEGG: drm:Dred_1429 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase complement(2679150..2680448) Desulfotomaculum ruminis DSM 2154 10739028 YP_004546139.1 CDS Desru_2627 NC_015589.1 2680761 2681477 R KEGG: drm:Dred_1428 hypothetical protein; hypothetical protein complement(2680761..2681477) Desulfotomaculum ruminis DSM 2154 10739029 YP_004546140.1 CDS Desru_2628 NC_015589.1 2681477 2682757 R PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1427 hypothetical protein; hypothetical protein complement(2681477..2682757) Desulfotomaculum ruminis DSM 2154 10739030 YP_004546141.1 CDS Desru_2629 NC_015589.1 2682893 2684311 R KEGG: drm:Dred_1424 hypothetical protein; hypothetical protein complement(2682893..2684311) Desulfotomaculum ruminis DSM 2154 10739031 YP_004546142.1 CDS Desru_2630 NC_015589.1 2684839 2685555 R KEGG: drm:Dred_1426 hypothetical protein; hypothetical protein complement(2684839..2685555) Desulfotomaculum ruminis DSM 2154 10739032 YP_004546143.1 CDS Desru_2631 NC_015589.1 2685555 2686847 R PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1425 hypothetical protein; hypothetical protein complement(2685555..2686847) Desulfotomaculum ruminis DSM 2154 10739033 YP_004546144.1 CDS Desru_2632 NC_015589.1 2687014 2688393 R KEGG: drm:Dred_1424 hypothetical protein; hypothetical protein complement(2687014..2688393) Desulfotomaculum ruminis DSM 2154 10739034 YP_004546145.1 CDS Desru_2633 NC_015589.1 2688919 2690715 R KEGG: drm:Dred_1423 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor type A complement(2688919..2690715) Desulfotomaculum ruminis DSM 2154 10739035 YP_004546146.1 CDS Desru_2634 NC_015589.1 2690783 2691619 R KEGG: drm:Dred_1422 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase complement(2690783..2691619) Desulfotomaculum ruminis DSM 2154 10739036 YP_004546147.1 CDS Desru_2635 NC_015589.1 2691774 2692073 D KEGG: drm:Dred_1421 hypothetical protein; hypothetical protein 2691774..2692073 Desulfotomaculum ruminis DSM 2154 10739037 YP_004546148.1 CDS Desru_2636 NC_015589.1 2692135 2692575 D KEGG: drm:Dred_1420 hypothetical protein; hypothetical protein 2692135..2692575 Desulfotomaculum ruminis DSM 2154 10739038 YP_004546149.1 CDS Desru_2637 NC_015589.1 2692756 2696499 R KEGG: drm:Dred_1416 UvrD-like DNA helicase, C terminal; TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase; recombination helicase AddA complement(2692756..2696499) Desulfotomaculum ruminis DSM 2154 10739040 YP_004546150.1 CDS Desru_2638 NC_015589.1 2696483 2699956 R TIGRFAM: ATP-dependent nuclease subunit B; KEGG: drm:Dred_1415 UvrD-like DNA helicase, C terminal; ATP-dependent nuclease subunit B complement(2696483..2699956) Desulfotomaculum ruminis DSM 2154 10739041 YP_004546151.1 CDS Desru_2639 NC_015589.1 2700206 2700580 D PFAM: Penicillinase repressor; KEGG: cbe:Cbei_3104 CopY family transcriptional regulator; penicillinase repressor 2700206..2700580 Desulfotomaculum ruminis DSM 2154 10739042 YP_004546152.1 CDS Desru_2640 NC_015589.1 2700592 2702676 D KEGG: cth:Cthe_1810 peptidase M56, BlaR1; PFAM: peptidase M56 BlaR1; cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; peptidase M56 BlaR1 2700592..2702676 Desulfotomaculum ruminis DSM 2154 10739043 YP_004546153.1 CDS Desru_2641 NC_015589.1 2702807 2704306 D TIGRFAM: threonine synthase; KEGG: drm:Dred_1379 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 2702807..2704306 Desulfotomaculum ruminis DSM 2154 10739044 YP_004546154.1 CDS Desru_2642 NC_015589.1 2704388 2705848 R PFAM: amino acid permease-associated region; KEGG: drm:Dred_1373 amino acid permease-associated region; amino acid permease-associated protein complement(2704388..2705848) Desulfotomaculum ruminis DSM 2154 10739045 YP_004546155.1 CDS Desru_2643 NC_015589.1 2706388 2707257 R KEGG: hmo:HM1_2343 hydrolase, carbon-nitrogen family, putative; TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; N-carbamoylputrescine amidase complement(2706388..2707257) Desulfotomaculum ruminis DSM 2154 10739046 YP_004546156.1 CDS Desru_2644 NC_015589.1 2707283 2708302 R TIGRFAM: agmatine deiminase; KEGG: hmo:HM1_2344 Agmatine deiminase. putative; PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase complement(2707283..2708302) Desulfotomaculum ruminis DSM 2154 10739047 YP_004546157.1 CDS Desru_2645 NC_015589.1 2708481 2709782 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1372 hypothetical protein; hypothetical protein complement(2708481..2709782) Desulfotomaculum ruminis DSM 2154 10739048 YP_004546158.1 CDS Desru_2646 NC_015589.1 2709796 2711175 R PFAM: FAD linked oxidase domain protein; KEGG: adg:Adeg_0562 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein complement(2709796..2711175) Desulfotomaculum ruminis DSM 2154 10739049 YP_004546159.1 CDS Desru_2647 NC_015589.1 2711644 2712132 D PFAM: Rubrerythrin; KEGG: dae:Dtox_1560 rubrerythrin; rubrerythrin 2711644..2712132 Desulfotomaculum ruminis DSM 2154 10739050 YP_004546160.1 CDS Desru_2648 NC_015589.1 2712163 2712342 D KEGG: bfu:BC1G_07662 hypothetical protein; hypothetical protein 2712163..2712342 Desulfotomaculum ruminis DSM 2154 10739051 YP_004546161.1 CDS Desru_2649 NC_015589.1 2712410 2712856 R PFAM: protein of unknown function DUF188; KEGG: drm:Dred_1370 hypothetical protein; hypothetical protein complement(2712410..2712856) Desulfotomaculum ruminis DSM 2154 10739052 YP_004546162.1 CDS Desru_2650 NC_015589.1 2712874 2714742 R KEGG: drm:Dred_1368 HSP70 family ATPase; HSP70 family ATPase complement(2712874..2714742) Desulfotomaculum ruminis DSM 2154 10739053 YP_004546163.1 CDS Desru_2651 NC_015589.1 2714845 2717388 R TIGRFAM: alpha-glucan phosphorylase; KEGG: drm:Dred_1364 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase complement(2714845..2717388) Desulfotomaculum ruminis DSM 2154 10739054 YP_004546164.1 CDS Desru_2652 NC_015589.1 2717636 2718820 D KEGG: dae:Dtox_3232 hypothetical protein; hypothetical protein 2717636..2718820 Desulfotomaculum ruminis DSM 2154 10739055 YP_004546165.1 CDS Desru_2653 NC_015589.1 2718856 2719599 D PFAM: PRC-barrel domain protein; KEGG: dae:Dtox_3233 hypothetical protein; PRC-barrel domain-containing protein 2718856..2719599 Desulfotomaculum ruminis DSM 2154 10739056 YP_004546166.1 CDS Desru_2654 NC_015589.1 2719616 2720959 D PFAM: VanW family protein; G5 domain protein; KEGG: dae:Dtox_3234 VanW family protein; VanW family protein 2719616..2720959 Desulfotomaculum ruminis DSM 2154 10739057 YP_004546167.1 CDS Desru_2655 NC_015589.1 2720987 2721223 R manually curated; TIGRFAM: conserved hypothetical protein; KEGG: amt:Amet_3680 putative selenoprotein; PFAM: SelT/selW/selH selenoprotein; SelT/selW/selH selenoprotein complement(2720987..2721223) Desulfotomaculum ruminis DSM 2154 10739058 YP_004546168.1 CDS Desru_2656 NC_015589.1 2721285 2722241 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: drm:Dred_1362 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta complement(2721285..2722241) Desulfotomaculum ruminis DSM 2154 10739059 YP_004546169.1 CDS Desru_2657 NC_015589.1 2722399 2724789 R KEGG: drm:Dred_1359 peptidase S16, lon domain-containing protein; peptidase S16 lon domain-containing protein complement(2722399..2724789) Desulfotomaculum ruminis DSM 2154 10739060 YP_004546170.1 CDS Desru_2658 NC_015589.1 2724946 2725896 D TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: drm:Dred_1358 putative radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 2724946..2725896 Desulfotomaculum ruminis DSM 2154 10739061 YP_004546171.1 CDS Desru_2659 NC_015589.1 2725893 2728469 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: nth:Nther_0751 pyruvate phosphate dikinase PEP/pyruvate-binding; pyruvate phosphate dikinase PEP/pyruvate-binding protein complement(2725893..2728469) Desulfotomaculum ruminis DSM 2154 10739062 YP_004546172.1 CDS Desru_2660 NC_015589.1 2728630 2730897 R PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2917 S-layer domain-containing protein; S-layer protein complement(2728630..2730897) Desulfotomaculum ruminis DSM 2154 10739063 YP_004546173.1 CDS Desru_2661 NC_015589.1 2731097 2731948 R KEGG: drm:Dred_1357 hypothetical protein; hypothetical protein complement(2731097..2731948) Desulfotomaculum ruminis DSM 2154 10739064 YP_004546174.1 CDS Desru_2662 NC_015589.1 2731950 2732879 R KEGG: drm:Dred_1356 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2731950..2732879) Desulfotomaculum ruminis DSM 2154 10739065 YP_004546175.1 CDS Desru_2663 NC_015589.1 2732876 2735218 R KEGG: drm:Dred_1355 hypothetical protein; hypothetical protein complement(2732876..2735218) Desulfotomaculum ruminis DSM 2154 10739066 YP_004546176.1 CDS Desru_2664 NC_015589.1 2735222 2736649 R PFAM: WD40-like beta Propeller containing protein; KEGG: drm:Dred_1354 WD40 domain-containing protein; WD40-like beta Propeller containing protein complement(2735222..2736649) Desulfotomaculum ruminis DSM 2154 10739067 YP_004546177.1 CDS Desru_2665 NC_015589.1 2736649 2737188 R KEGG: drm:Dred_1353 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 family RNA polymerase sigma factor complement(2736649..2737188) Desulfotomaculum ruminis DSM 2154 10739068 YP_004546178.1 CDS Desru_2666 NC_015589.1 2737351 2738319 R TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: drm:Dred_1352 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; fructose-1,6-bisphosphatase class II complement(2737351..2738319) Desulfotomaculum ruminis DSM 2154 10739069 YP_004546179.1 CDS Desru_2667 NC_015589.1 2738495 2738647 D KEGG: ptm:GSPATT00024236001 hypothetical protein; hypothetical protein 2738495..2738647 Desulfotomaculum ruminis DSM 2154 10739070 YP_004546180.1 CDS Desru_2668 NC_015589.1 2738745 2739947 D PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1349 hypothetical protein; major facilitator superfamily protein 2738745..2739947 Desulfotomaculum ruminis DSM 2154 10739071 YP_004546181.1 CDS Desru_2669 NC_015589.1 2739936 2740847 R KEGG: drm:Dred_1348 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RluA family pseudouridine synthase complement(2739936..2740847) Desulfotomaculum ruminis DSM 2154 10739072 YP_004546182.1 CDS Desru_2670 NC_015589.1 2741078 2741620 D PFAM: Uncharacterised protein family UPF0302, N-terminal; Uncharacterised protein family UPF0302, C-terminal; KEGG: drm:Dred_1347 hypothetical protein; hypothetical protein 2741078..2741620 Desulfotomaculum ruminis DSM 2154 10739073 YP_004546183.1 CDS Desru_2671 NC_015589.1 2741797 2745228 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: drm:Dred_1346 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; diguanylate cyclase 2741797..2745228 Desulfotomaculum ruminis DSM 2154 10739074 YP_004546184.1 CDS Desru_2672 NC_015589.1 2745302 2745589 R PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: drm:Dred_1344 stress responsive alpha-beta barrel domain-containing protein; stress responsive alpha-beta barrel domain-containing protein complement(2745302..2745589) Desulfotomaculum ruminis DSM 2154 10739075 YP_004546185.1 CDS Desru_2673 NC_015589.1 2745705 2746502 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein complement(2745705..2746502) Desulfotomaculum ruminis DSM 2154 10739076 YP_004546186.1 CDS Desru_2674 NC_015589.1 2746676 2748112 D KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: polysaccharide deacetylase; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; polysaccharide deacetylase 2746676..2748112 Desulfotomaculum ruminis DSM 2154 10739077 YP_004546187.1 CDS Desru_2675 NC_015589.1 2748373 2749113 D KEGG: cpy:Cphy_1600 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; LytTr DNA-binding protein 2748373..2749113 Desulfotomaculum ruminis DSM 2154 10739078 YP_004546188.1 CDS Desru_2676 NC_015589.1 2749458 2750024 D PFAM: thioesterase superfamily protein; KEGG: cdl:CDR20291_0846 putative thioesterase; thioesterase superfamily protein 2749458..2750024 Desulfotomaculum ruminis DSM 2154 10739079 YP_004546189.1 CDS Desru_2677 NC_015589.1 2750154 2751206 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_0901 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein complement(2750154..2751206) Desulfotomaculum ruminis DSM 2154 10739080 YP_004546190.1 CDS Desru_2678 NC_015589.1 2751398 2751613 R hypothetical protein complement(2751398..2751613) Desulfotomaculum ruminis DSM 2154 10739081 YP_004546191.1 CDS Desru_2679 NC_015589.1 2751591 2752481 R PFAM: Hsp33 protein; KEGG: drm:Dred_1343 HSP33 protein; Hsp33 protein complement(2751591..2752481) Desulfotomaculum ruminis DSM 2154 10739082 YP_004546192.1 CDS Desru_2680 NC_015589.1 2752653 2753363 D PFAM: AIG2 family protein; KEGG: dre:100149204 si:ch211-149a19.5; AIG2 family protein 2752653..2753363 Desulfotomaculum ruminis DSM 2154 10739083 YP_004546193.1 CDS Desru_2681 NC_015589.1 2753398 2753859 R KEGG: drm:Dred_1342 hypothetical protein; hypothetical protein complement(2753398..2753859) Desulfotomaculum ruminis DSM 2154 10739084 YP_004546194.1 CDS Desru_2682 NC_015589.1 2754018 2755343 D PFAM: acetyl-CoA hydrolase/transferase; KEGG: drm:Dred_1315 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 2754018..2755343 Desulfotomaculum ruminis DSM 2154 10739085 YP_004546195.1 CDS Desru_2683 NC_015589.1 2755540 2755926 R PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: drm:Dred_1341 dinitrogenase iron-molybdenum cofactor biosynthesis; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(2755540..2755926) Desulfotomaculum ruminis DSM 2154 10739086 YP_004546196.1 CDS Desru_2684 NC_015589.1 2756043 2756444 R PFAM: protein of unknown function DUF134; KEGG: drm:Dred_1340 hypothetical protein; hypothetical protein complement(2756043..2756444) Desulfotomaculum ruminis DSM 2154 10739087 YP_004546197.1 CDS Desru_2685 NC_015589.1 2757216 2757893 D KEGG: dhd:Dhaf_2146 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 2757216..2757893 Desulfotomaculum ruminis DSM 2154 10739088 YP_004546198.1 CDS Desru_2686 NC_015589.1 2757886 2758803 D KEGG: dsy:DSY1065 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein 2757886..2758803 Desulfotomaculum ruminis DSM 2154 10739089 YP_004546199.1 CDS Desru_2687 NC_015589.1 2758919 2759587 D KEGG: dhd:Dhaf_2148 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2758919..2759587 Desulfotomaculum ruminis DSM 2154 10739090 YP_004546200.1 CDS Desru_2688 NC_015589.1 2759601 2762258 D PFAM: protein of unknown function DUF214; KEGG: dhd:Dhaf_2149 protein of unknown function DUF214; hypothetical protein 2759601..2762258 Desulfotomaculum ruminis DSM 2154 10739091 YP_004546201.1 CDS Desru_2689 NC_015589.1 2762433 2762621 R PFAM: PspC domain protein; KEGG: drm:Dred_1339 phage shock protein C, PspC; PspC domain-containing protein complement(2762433..2762621) Desulfotomaculum ruminis DSM 2154 10739092 YP_004546202.1 CDS Desru_2690 NC_015589.1 2762749 2763009 D PFAM: protein of unknown function DUF1294; KEGG: drm:Dred_1338 hypothetical protein; hypothetical protein 2762749..2763009 Desulfotomaculum ruminis DSM 2154 10739093 YP_004546203.1 CDS Desru_2691 NC_015589.1 2763202 2763825 D PFAM: Chromate transporter; KEGG: drm:Dred_1337 chromate transporter; chromate transporter 2763202..2763825 Desulfotomaculum ruminis DSM 2154 10739094 YP_004546204.1 CDS Desru_2692 NC_015589.1 2763929 2764930 D PFAM: L-asparaginase II; KEGG: drm:Dred_1336 L-asparaginase II; L-asparaginase II 2763929..2764930 Desulfotomaculum ruminis DSM 2154 10739095 YP_004546205.1 CDS Desru_2693 NC_015589.1 2765009 2765641 R PFAM: cell wall hydrolase SleB; KEGG: drm:Dred_1335 cell wall hydrolase, SleB; cell wall hydrolase SleB complement(2765009..2765641) Desulfotomaculum ruminis DSM 2154 10739096 YP_004546206.1 CDS Desru_2694 NC_015589.1 2765873 2766148 R KEGG: drm:Dred_1332 hypothetical protein; hypothetical protein complement(2765873..2766148) Desulfotomaculum ruminis DSM 2154 10739097 YP_004546207.1 CDS Desru_2695 NC_015589.1 2766255 2767370 R KEGG: drm:Dred_1330 formate dehydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; Formate dehydrogenase complement(2766255..2767370) Desulfotomaculum ruminis DSM 2154 10739098 YP_004546208.1 CDS Desru_2696 NC_015589.1 2767388 2767834 R KEGG: drm:Dred_1329 methyl-viologen-reducing hydrogenase, delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit; methyl-viologen-reducing hydrogenase subunit delta complement(2767388..2767834) Desulfotomaculum ruminis DSM 2154 10739099 YP_004546209.1 CDS Desru_2697 NC_015589.1 2767855 2770878 R PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_1328 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; FAD dependent oxidoreductase complement(2767855..2770878) Desulfotomaculum ruminis DSM 2154 10739100 YP_004546210.1 CDS Desru_2698 NC_015589.1 2770895 2775346 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: drm:Dred_1327 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2770895..2775346) Desulfotomaculum ruminis DSM 2154 10739101 YP_004546211.1 CDS Desru_2699 NC_015589.1 2775375 2776223 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1326 hypothetical protein; hypothetical protein complement(2775375..2776223) Desulfotomaculum ruminis DSM 2154 10739102 YP_004546212.1 CDS Desru_2700 NC_015589.1 2776263 2776820 R KEGG: drm:Dred_1325 heterodisulfide reductase, C subunit; heterodisulfide reductase subunit C complement(2776263..2776820) Desulfotomaculum ruminis DSM 2154 10739103 YP_004546213.1 CDS Desru_2701 NC_015589.1 2777278 2777415 R hypothetical protein complement(2777278..2777415) Desulfotomaculum ruminis DSM 2154 10739104 YP_004546214.1 CDS Desru_2702 NC_015589.1 2777639 2777797 R KEGG: drm:Dred_1322 small, acid-soluble spore proteins, alpha/be; small acid-soluble spore protein alpha/beta type complement(2777639..2777797) Desulfotomaculum ruminis DSM 2154 10739105 YP_004546215.1 CDS Desru_2703 NC_015589.1 2777940 2778698 D PFAM: PP-loop domain protein; KEGG: drm:Dred_1321 PP-loop domain-containing protein; PP-loop domain-containing protein 2777940..2778698 Desulfotomaculum ruminis DSM 2154 10739106 YP_004546216.1 CDS Desru_2705 NC_015589.1 2779389 2780531 R KEGG: lil:LA_1813 hypothetical protein; hypothetical protein complement(2779389..2780531) Desulfotomaculum ruminis DSM 2154 10739108 YP_004546217.1 CDS Desru_2706 NC_015589.1 2780942 2781421 R PFAM: protein of unknown function DUF552; KEGG: drm:Dred_1320 hypothetical protein; hypothetical protein complement(2780942..2781421) Desulfotomaculum ruminis DSM 2154 10739109 YP_004546218.1 CDS Desru_2707 NC_015589.1 2781605 2781862 D PFAM: glutaredoxin; KEGG: drm:Dred_1319 hypothetical protein; glutaredoxin 2781605..2781862 Desulfotomaculum ruminis DSM 2154 10739110 YP_004546219.1 CDS Desru_2708 NC_015589.1 2782225 2782863 D KEGG: drm:Dred_1318 phosphoribosyltransferase; phosphoribosyltransferase 2782225..2782863 Desulfotomaculum ruminis DSM 2154 10739111 YP_004546220.1 CDS Desru_2709 NC_015589.1 2783034 2784314 D KEGG: drm:Dred_1317 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease 2783034..2784314 Desulfotomaculum ruminis DSM 2154 10739112 YP_004546221.1 CDS Desru_2710 NC_015589.1 2784370 2785179 R PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB; integrase catalytic subunit complement(2784370..2785179) Desulfotomaculum ruminis DSM 2154 10739113 YP_004546222.1 CDS Desru_2711 NC_015589.1 2785197 2785718 R PFAM: transposase IS3/IS911 family protein; KEGG: bmj:BMULJ_05181 ISBmu5a transposase; transposase IS3/IS911 family protein complement(2785197..2785718) Desulfotomaculum ruminis DSM 2154 10739114 YP_004546223.1 CDS Desru_2712 NC_015589.1 2785795 2786811 R PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1316 hypothetical protein; hypothetical protein complement(2785795..2786811) Desulfotomaculum ruminis DSM 2154 10739115 YP_004546224.1 CDS Desru_2713 NC_015589.1 2786834 2786992 R KEGG: bmq:BMQ_3615 major facilitator superfamily transporter; major facilitator superfamily transporter complement(2786834..2786992) Desulfotomaculum ruminis DSM 2154 10739116 YP_004546225.1 CDS Desru_2714 NC_015589.1 2787377 2788702 D PFAM: acetyl-CoA hydrolase/transferase; KEGG: drm:Dred_1315 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 2787377..2788702 Desulfotomaculum ruminis DSM 2154 10739117 YP_004546226.1 CDS Desru_2715 NC_015589.1 2788809 2789615 R PFAM: hypothetical protein; KEGG: drm:Dred_1314 hypothetical protein; hypothetical protein complement(2788809..2789615) Desulfotomaculum ruminis DSM 2154 10739118 YP_004546227.1 CDS Desru_2716 NC_015589.1 2789612 2790541 R PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1313 hypothetical protein; hypothetical protein complement(2789612..2790541) Desulfotomaculum ruminis DSM 2154 10739119 YP_004546228.1 CDS Desru_2717 NC_015589.1 2790807 2792165 R KEGG: drm:Dred_1312 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; sigma-54 factor interaction domain-containing protein complement(2790807..2792165) Desulfotomaculum ruminis DSM 2154 10739120 YP_004546229.1 CDS Desru_2718 NC_015589.1 2792162 2794021 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: drm:Dred_1311 sensory histidine kinase AtoS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS sensor protein complement(2792162..2794021) Desulfotomaculum ruminis DSM 2154 10739121 YP_004546230.1 CDS Desru_2719 NC_015589.1 2794150 2794371 D KEGG: dae:Dtox_2368 hypothetical protein; hypothetical protein 2794150..2794371 Desulfotomaculum ruminis DSM 2154 10739122 YP_004546231.1 CDS Desru_2720 NC_015589.1 2794656 2795510 R PFAM: ABC-3 protein; KEGG: drm:Dred_2647 ABC-3 protein; ABC-3 protein complement(2794656..2795510) Desulfotomaculum ruminis DSM 2154 10739123 YP_004546232.1 CDS Desru_2721 NC_015589.1 2795525 2796268 R KEGG: drm:Dred_2646 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2795525..2796268) Desulfotomaculum ruminis DSM 2154 10739124 YP_004546233.1 CDS Desru_2722 NC_015589.1 2796304 2796729 R PFAM: ferric-uptake regulator; KEGG: drm:Dred_2644 ferric uptake regulator family protein; ferric-uptake regulator complement(2796304..2796729) Desulfotomaculum ruminis DSM 2154 10739125 YP_004546234.1 CDS Desru_2723 NC_015589.1 2796884 2797423 R KEGG: drm:Dred_1310 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein complement(2796884..2797423) Desulfotomaculum ruminis DSM 2154 10739126 YP_004546235.1 CDS Desru_2724 NC_015589.1 2797498 2797998 R PFAM: protein of unknown function DUF523; KEGG: drm:Dred_1309 hypothetical protein; hypothetical protein complement(2797498..2797998) Desulfotomaculum ruminis DSM 2154 10739127 YP_004546236.1 CDS Desru_2725 NC_015589.1 2798097 2799059 R KEGG: drm:Dred_1307 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(2798097..2799059) Desulfotomaculum ruminis DSM 2154 10739128 YP_004546237.1 CDS Desru_2726 NC_015589.1 2799434 2799619 R KEGG: tva:TVAG_071430 hypothetical protein; hypothetical protein complement(2799434..2799619) Desulfotomaculum ruminis DSM 2154 10739130 YP_004546238.1 CDS Desru_2727 NC_015589.1 2799807 2800196 D KEGG: drm:Dred_2777 hypothetical protein; hypothetical protein 2799807..2800196 Desulfotomaculum ruminis DSM 2154 10739131 YP_004546239.1 CDS Desru_2728 NC_015589.1 2800273 2800590 R PFAM: Rubrerythrin; KEGG: mmx:MmarC6_1061 hypothetical protein; rubrerythrin complement(2800273..2800590) Desulfotomaculum ruminis DSM 2154 10739132 YP_004546240.1 CDS Desru_2730 NC_015589.1 2801352 2801720 D KEGG: cob:COB47_1940 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 2801352..2801720 Desulfotomaculum ruminis DSM 2154 10739134 YP_004546241.1 CDS Desru_2731 NC_015589.1 2801756 2802391 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mmp:MMP0849 L-lysine/homoserine-homoserine lactone exporter family protein; lysine exporter protein LysE/YggA complement(2801756..2802391) Desulfotomaculum ruminis DSM 2154 10739135 YP_004546242.1 CDS Desru_2732 NC_015589.1 2802574 2802717 D KEGG: pth:PTH_1965 hypothetical protein; hypothetical protein 2802574..2802717 Desulfotomaculum ruminis DSM 2154 10739136 YP_004546243.1 CDS Desru_2733 NC_015589.1 2802783 2803292 R PFAM: nitroreductase; KEGG: mru:mru_0692 nitroreductase family protein; nitroreductase complement(2802783..2803292) Desulfotomaculum ruminis DSM 2154 10739137 YP_004546244.1 CDS Desru_2734 NC_015589.1 2803416 2804057 R KEGG: drm:Dred_0778 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2803416..2804057) Desulfotomaculum ruminis DSM 2154 10739138 YP_004546245.1 CDS Desru_2735 NC_015589.1 2804810 2805640 R KEGG: drm:Dred_1572 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(2804810..2805640) Desulfotomaculum ruminis DSM 2154 10739139 YP_004546246.1 CDS Desru_2736 NC_015589.1 2805794 2806663 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: dau:Daud_2121 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein complement(2805794..2806663) Desulfotomaculum ruminis DSM 2154 10739140 YP_004546247.1 CDS Desru_2737 NC_015589.1 2806900 2807751 D KEGG: rbi:RB2501_06115 hypothetical protein; hypothetical protein 2806900..2807751 Desulfotomaculum ruminis DSM 2154 10739141 YP_004546248.1 CDS Desru_2738 NC_015589.1 2808134 2809363 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ckr:CKR_3002 hypothetical protein; transposase IS116/IS110/IS902 family protein complement(2808134..2809363) Desulfotomaculum ruminis DSM 2154 10739142 YP_004546249.1 CDS Desru_2739 NC_015589.1 2809611 2810441 D KEGG: drm:Dred_2930 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase 2809611..2810441 Desulfotomaculum ruminis DSM 2154 10739143 YP_004546250.1 CDS Desru_2740 NC_015589.1 2810507 2811214 R KEGG: drm:Dred_2931 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2810507..2811214) Desulfotomaculum ruminis DSM 2154 10739144 YP_004546251.1 CDS Desru_2741 NC_015589.1 2811207 2811998 R KEGG: drm:Dred_2932 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2811207..2811998) Desulfotomaculum ruminis DSM 2154 10739145 YP_004546252.1 CDS Desru_2742 NC_015589.1 2811991 2813064 R PFAM: inner-membrane translocator; KEGG: drm:Dred_2933 inner-membrane translocator; inner-membrane translocator complement(2811991..2813064) Desulfotomaculum ruminis DSM 2154 10739146 YP_004546253.1 CDS Desru_2743 NC_015589.1 2813068 2813991 R PFAM: inner-membrane translocator; KEGG: drm:Dred_2934 inner-membrane translocator; inner-membrane translocator complement(2813068..2813991) Desulfotomaculum ruminis DSM 2154 10739147 YP_004546254.1 CDS Desru_2744 NC_015589.1 2814046 2815221 R PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2935 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2814046..2815221) Desulfotomaculum ruminis DSM 2154 10739148 YP_004546255.1 CDS Desru_2746 NC_015589.1 2816282 2817037 D PFAM: Protein of unknown function DUF2087; KEGG: gym:GYMC10_3986 protein of unknown function DUF2087; hypothetical protein 2816282..2817037 Desulfotomaculum ruminis DSM 2154 10739151 YP_004546256.1 CDS Desru_2747 NC_015589.1 2817060 2817413 D PFAM: Protein of unknown function DUF2087; KEGG: cbe:Cbei_4073 regulatory protein, LuxR; hypothetical protein 2817060..2817413 Desulfotomaculum ruminis DSM 2154 10739152 YP_004546257.1 CDS Desru_2748 NC_015589.1 2817420 2817791 D KEGG: bbe:BBR47_51340 hypothetical protein; hypothetical protein 2817420..2817791 Desulfotomaculum ruminis DSM 2154 10739153 YP_004546258.1 CDS Desru_2749 NC_015589.1 2817788 2818483 D PFAM: NADPH-dependent FMN reductase; KEGG: ckr:CKR_2164 hypothetical protein; NADPH-dependent FMN reductase 2817788..2818483 Desulfotomaculum ruminis DSM 2154 10739154 YP_004546259.1 CDS Desru_2751 NC_015589.1 2819347 2819985 R PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: pjd:Pjdr2_1258 protein of unknown function UPF0029; hypothetical protein complement(2819347..2819985) Desulfotomaculum ruminis DSM 2154 10739156 YP_004546260.1 CDS Desru_2753 NC_015589.1 2820440 2822113 R PFAM: ABC-1 domain-containing protein; aminoglycoside phosphotransferase; KEGG: gwc:GWCH70_1612 ABC-1 domain protein; ABC-1 domain-containing protein complement(2820440..2822113) Desulfotomaculum ruminis DSM 2154 10739158 YP_004546261.1 CDS Desru_2754 NC_015589.1 2822402 2822791 D KEGG: cbe:Cbei_3310 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; regulatory protein MerR 2822402..2822791 Desulfotomaculum ruminis DSM 2154 10739159 YP_004546262.1 CDS Desru_2756 NC_015589.1 2823751 2825217 D KEGG: dhd:Dhaf_0018 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2823751..2825217 Desulfotomaculum ruminis DSM 2154 10739161 YP_004546263.1 CDS Desru_2759 NC_015589.1 2825929 2826369 D KEGG: toc:Toce_0279 hypothetical protein; hypothetical protein 2825929..2826369 Desulfotomaculum ruminis DSM 2154 10739164 YP_004546264.1 CDS Desru_2760 NC_015589.1 2826748 2827224 D PFAM: Uncharacterised protein family UPF0066; KEGG: ckr:CKR_0280 hypothetical protein; hypothetical protein 2826748..2827224 Desulfotomaculum ruminis DSM 2154 10739165 YP_004546265.1 CDS Desru_2761 NC_015589.1 2827444 2828544 R KEGG: dhd:Dhaf_0495 response regulator receiver and SARP domain protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; transcriptional activator domain; SMART: response regulator receiver; response regulator receiver complement(2827444..2828544) Desulfotomaculum ruminis DSM 2154 10739166 YP_004546266.1 CDS Desru_2762 NC_015589.1 2828773 2831874 R KEGG: bss:BSUW23_17900 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor transmembrane region; glycoside hydrolase family 2 sugar binding; response regulator receiver; histidine kinase internal region; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; ATP-binding protein complement(2828773..2831874) Desulfotomaculum ruminis DSM 2154 10739167 YP_004546267.1 CDS Desru_2763 NC_015589.1 2832340 2835723 R KEGG: pjd:Pjdr2_0886 cell wall/surface repeat protein; PFAM: S-layer domain-containing protein; Fibronectin type III domain protein; SMART: Immunoglobulin subtype; Immunoglobulin C2 type; Fibronectin type III domain protein; S-layer protein complement(2832340..2835723) Desulfotomaculum ruminis DSM 2154 10739168 YP_004546268.1 CDS Desru_2764 NC_015589.1 2836262 2836477 D KEGG: dhd:Dhaf_0543 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2836262..2836477 Desulfotomaculum ruminis DSM 2154 10739169 YP_004546269.1 CDS Desru_2765 NC_015589.1 2836464 2836907 D manually curated; KEGG: ckl:CKL_1929 hypothetical protein; hypothetical protein 2836464..2836907 Desulfotomaculum ruminis DSM 2154 10739170 YP_004546270.1 CDS Desru_2766 NC_015589.1 2837092 2837961 D KEGG: aoe:Clos_2846 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; transcription activator effector binding protein 2837092..2837961 Desulfotomaculum ruminis DSM 2154 10739171 YP_004546271.1 CDS Desru_2767 NC_015589.1 2838075 2838323 R KEGG: dhd:Dhaf_3957 hypothetical protein; hypothetical protein complement(2838075..2838323) Desulfotomaculum ruminis DSM 2154 10739172 YP_004546272.1 CDS Desru_2768 NC_015589.1 2838477 2839079 R PFAM: regulatory protein TetR; KEGG: dsy:DSY2813 hypothetical protein; regulatory protein TetR complement(2838477..2839079) Desulfotomaculum ruminis DSM 2154 10739173 YP_004546273.1 CDS Desru_2769 NC_015589.1 2839237 2839518 D PFAM: protein of unknown function DUF156; KEGG: ckr:CKR_0067 hypothetical protein; hypothetical protein 2839237..2839518 Desulfotomaculum ruminis DSM 2154 10739174 YP_004546274.1 CDS Desru_2770 NC_015589.1 2839537 2840589 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dhd:Dhaf_2294 protein of unknown function DUF6 transmembrane; hypothetical protein 2839537..2840589 Desulfotomaculum ruminis DSM 2154 10739175 YP_004546275.1 CDS Desru_2771 NC_015589.1 2840683 2841369 D KEGG: ccb:Clocel_0494 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2840683..2841369 Desulfotomaculum ruminis DSM 2154 10739176 YP_004546276.1 CDS Desru_2772 NC_015589.1 2841483 2843144 D TIGRFAM: dihydroxy-acid dehydratase; KEGG: ccb:Clocel_0493 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 2841483..2843144 Desulfotomaculum ruminis DSM 2154 10739177 YP_004546277.1 CDS Desru_2773 NC_015589.1 2843248 2843559 D KEGG: drm:Dred_2028 hypothetical protein; hypothetical protein 2843248..2843559 Desulfotomaculum ruminis DSM 2154 10739178 YP_004546278.1 CDS Desru_2774 NC_015589.1 2843817 2844101 D KEGG: bsu:BSU36990 hypothetical protein; hypothetical protein 2843817..2844101 Desulfotomaculum ruminis DSM 2154 10739179 YP_004546279.1 CDS Desru_2775 NC_015589.1 2844460 2844891 D KEGG: dhd:Dhaf_2642 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 2844460..2844891 Desulfotomaculum ruminis DSM 2154 10739180 YP_004546280.1 CDS Desru_2776 NC_015589.1 2844896 2845063 D KEGG: cat:CA2559_01880 hypothetical protein; hypothetical protein 2844896..2845063 Desulfotomaculum ruminis DSM 2154 10739181 YP_004546281.1 CDS Desru_2777 NC_015589.1 2847316 2847867 R KEGG: clj:CLJU_c25490 SpoIID-like domain-containing protein; hypothetical protein complement(2847316..2847867) Desulfotomaculum ruminis DSM 2154 10739182 YP_004546282.1 CDS Desru_2779 NC_015589.1 2848562 2848888 R PFAM: Holin toxin secretion/phage lysis; KEGG: gtn:GTNG_2759 prophage LambdaBa01, holin, putative; Holin toxin secretion/phage lysis complement(2848562..2848888) Desulfotomaculum ruminis DSM 2154 10739184 YP_004546283.1 CDS Desru_2780 NC_015589.1 2849051 2849503 R KEGG: drm:Dred_3142 copper amine oxidase domain-containing protein; copper amine oxidase domain-containing protein complement(2849051..2849503) Desulfotomaculum ruminis DSM 2154 10739185 YP_004546284.1 CDS Desru_2782 NC_015589.1 2851504 2851917 D KEGG: bai:BAA_3851 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2851504..2851917 Desulfotomaculum ruminis DSM 2154 10739187 YP_004546285.1 CDS Desru_2783 NC_015589.1 2851890 2852198 D KEGG: mca:MCA1163 nodulation protein nolNO, putative; hypothetical protein 2851890..2852198 Desulfotomaculum ruminis DSM 2154 10739188 YP_004546286.1 CDS Desru_2785 NC_015589.1 2854466 2854783 R KEGG: dre:799520 hypothetical protein LOC799520; hypothetical protein complement(2854466..2854783) Desulfotomaculum ruminis DSM 2154 10739191 YP_004546287.1 CDS Desru_2786 NC_015589.1 2855582 2855794 D KEGG: gwc:GWCH70_2840 holin-like protein; hypothetical protein 2855582..2855794 Desulfotomaculum ruminis DSM 2154 10739192 YP_004546288.1 CDS Desru_2787 NC_015589.1 2855794 2856213 D KEGG: drm:Dred_0380 hypothetical protein; hypothetical protein 2855794..2856213 Desulfotomaculum ruminis DSM 2154 10739193 YP_004546289.1 CDS Desru_2788 NC_015589.1 2856242 2857024 D KEGG: drm:Dred_2135 hypothetical protein; hypothetical protein 2856242..2857024 Desulfotomaculum ruminis DSM 2154 10739194 YP_004546290.1 CDS Desru_2789 NC_015589.1 2856996 2858101 R KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(join(2856996..2857847,2857847..2858101)) Desulfotomaculum ruminis DSM 2154 10739195 YP_004546291.1 CDS Desru_2791 NC_015589.1 2859138 2859755 R KEGG: tva:TVAG_475000 hypothetical protein; hypothetical protein complement(2859138..2859755) Desulfotomaculum ruminis DSM 2154 10739199 YP_004546292.1 CDS Desru_2792 NC_015589.1 2860058 2861299 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2860058..2861299 Desulfotomaculum ruminis DSM 2154 10739200 YP_004546293.1 CDS Desru_2793 NC_015589.1 2861665 2861877 D KEGG: pth:PTH_1470 hypothetical protein; hypothetical protein 2861665..2861877 Desulfotomaculum ruminis DSM 2154 10739201 YP_004546294.1 CDS Desru_2794 NC_015589.1 2861967 2862722 R KEGG: drm:Dred_1283 hypothetical protein; hypothetical protein complement(2861967..2862722) Desulfotomaculum ruminis DSM 2154 10739202 YP_004546295.1 CDS Desru_2795 NC_015589.1 2862724 2864016 R KEGG: drm:Dred_1282 radical SAM domain-containing protein; radical SAM domain-containing protein complement(2862724..2864016) Desulfotomaculum ruminis DSM 2154 10739203 YP_004546296.1 CDS Desru_2796 NC_015589.1 2864347 2865465 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase; NADH:flavin oxidoreductase complement(2864347..2865465) Desulfotomaculum ruminis DSM 2154 10739204 YP_004546297.1 CDS Desru_2797 NC_015589.1 2865655 2866011 D PFAM: helix-turn-helix HxlR type; KEGG: cbi:CLJ_B1630 putative transcriptional regulator; helix-turn-helix HxlR type 2865655..2866011 Desulfotomaculum ruminis DSM 2154 10739205 YP_004546298.1 CDS Desru_2798 NC_015589.1 2866036 2867328 R KEGG: drm:Dred_1281 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; asparaginyl-tRNA synthetase complement(2866036..2867328) Desulfotomaculum ruminis DSM 2154 10739206 YP_004546299.1 CDS Desru_2799 NC_015589.1 2867444 2868220 R TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: drm:Dred_1279 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase complement(2867444..2868220) Desulfotomaculum ruminis DSM 2154 10739207 YP_004546300.1 CDS Desru_2800 NC_015589.1 2868226 2869380 R PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_1278 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D complement(2868226..2869380) Desulfotomaculum ruminis DSM 2154 10739208 YP_004546301.1 CDS Desru_2801 NC_015589.1 2869607 2869801 D hypothetical protein 2869607..2869801 Desulfotomaculum ruminis DSM 2154 10739209 YP_004546302.1 CDS Desru_2802 NC_015589.1 2869856 2870959 R KEGG: pth:PTH_2121 hypothetical protein; hypothetical protein complement(2869856..2870959) Desulfotomaculum ruminis DSM 2154 10739210 YP_004546303.1 CDS Desru_2803 NC_015589.1 2870974 2871123 R KEGG: drm:Dred_1276 hypothetical protein; hypothetical protein complement(2870974..2871123) Desulfotomaculum ruminis DSM 2154 10739211 YP_004546304.1 CDS Desru_2804 NC_015589.1 2871135 2871416 R PFAM: protein of unknown function DUF503; KEGG: drm:Dred_1275 hypothetical protein; hypothetical protein complement(2871135..2871416) Desulfotomaculum ruminis DSM 2154 10739212 YP_004546305.1 CDS Desru_2805 NC_015589.1 2871481 2872323 R PFAM: peptidase M48 Ste24p; KEGG: drm:Dred_1274 peptidase M48, Ste24p; peptidase M48 Ste24p complement(2871481..2872323) Desulfotomaculum ruminis DSM 2154 10739213 YP_004546306.1 CDS Desru_2806 NC_015589.1 2872631 2873053 R PFAM: thioesterase superfamily protein; KEGG: pth:PTH_1022 hypothetical protein; thioesterase superfamily protein complement(2872631..2873053) Desulfotomaculum ruminis DSM 2154 10739214 YP_004546307.1 CDS Desru_2807 NC_015589.1 2873128 2874366 R PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1272 major facilitator transporter; major facilitator superfamily protein complement(2873128..2874366) Desulfotomaculum ruminis DSM 2154 10739215 YP_004546308.1 CDS Desru_2808 NC_015589.1 2874466 2875302 R KEGG: tjr:TherJR_2100 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein complement(2874466..2875302) Desulfotomaculum ruminis DSM 2154 10739216 YP_004546309.1 CDS Desru_2809 NC_015589.1 2875323 2876942 R KEGG: drm:Dred_1271 Dak phosphatase; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase; DAK2 domain fusion protein YloV complement(2875323..2876942) Desulfotomaculum ruminis DSM 2154 10739217 YP_004546310.1 CDS Desru_2810 NC_015589.1 2877200 2877937 D PFAM: Redoxin domain protein; KEGG: apv:Apar_0089 redoxin domain protein; redoxin domain-containing protein 2877200..2877937 Desulfotomaculum ruminis DSM 2154 10739218 YP_004546311.1 CDS Desru_2811 NC_015589.1 2878203 2878574 D PFAM: Protein of unknown function DUF2089; KEGG: dae:Dtox_2520 hypothetical protein; hypothetical protein 2878203..2878574 Desulfotomaculum ruminis DSM 2154 10739219 YP_004546312.1 CDS Desru_2812 NC_015589.1 2878594 2879010 D KEGG: dae:Dtox_2519 hypothetical protein; hypothetical protein 2878594..2879010 Desulfotomaculum ruminis DSM 2154 10739220 YP_004546313.1 CDS Desru_2813 NC_015589.1 2879027 2879275 D KEGG: dae:Dtox_2518 hypothetical protein; hypothetical protein 2879027..2879275 Desulfotomaculum ruminis DSM 2154 10739221 YP_004546314.1 CDS Desru_2814 NC_015589.1 2879291 2879638 D PFAM: membrane protein of unknown function; KEGG: dae:Dtox_2517 membrane protein of unknown function; hypothetical protein 2879291..2879638 Desulfotomaculum ruminis DSM 2154 10739222 YP_004546315.1 CDS Desru_2815 NC_015589.1 2879841 2880455 R KEGG: ssa:SSA_0405 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2879841..2880455) Desulfotomaculum ruminis DSM 2154 10739223 YP_004546316.1 CDS Desru_2816 NC_015589.1 2880919 2881116 R KEGG: dae:Dtox_2917 hypothetical protein; hypothetical protein complement(2880919..2881116) Desulfotomaculum ruminis DSM 2154 10739224 YP_004546317.1 CDS Desru_2817 NC_015589.1 2881129 2881971 R KEGG: dae:Dtox_2916 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein complement(2881129..2881971) Desulfotomaculum ruminis DSM 2154 10739225 YP_004546318.1 CDS Desru_2818 NC_015589.1 2882104 2882265 D hypothetical protein 2882104..2882265 Desulfotomaculum ruminis DSM 2154 10739226 YP_004546319.1 CDS Desru_2819 NC_015589.1 2882533 2883471 D PFAM: S-layer domain-containing protein; KEGG: pth:PTH_0765 signaling protein; S-layer protein 2882533..2883471 Desulfotomaculum ruminis DSM 2154 10739227 YP_004546320.1 CDS Desru_2820 NC_015589.1 2883546 2883950 R KEGG: pth:PTH_0040 hypothetical protein; hypothetical protein complement(2883546..2883950) Desulfotomaculum ruminis DSM 2154 10739228 YP_004546321.1 CDS Desru_2821 NC_015589.1 2884298 2885389 D KEGG: dae:Dtox_3414 dehydrogenase (flavoprotein)-like protein; dehydrogenase (flavoprotein)-like protein 2884298..2885389 Desulfotomaculum ruminis DSM 2154 10739229 YP_004546322.1 CDS Desru_2822 NC_015589.1 2885429 2885911 R KEGG: dau:Daud_0456 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase complement(2885429..2885911) Desulfotomaculum ruminis DSM 2154 10739230 YP_004546323.1 CDS Desru_2823 NC_015589.1 2891614 2892867 R KEGG: drm:Dred_1259 GTP-binding protein, HSR1-related; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; GTP-binding proten HflX complement(2891614..2892867) Desulfotomaculum ruminis DSM 2154 10739234 YP_004546324.1 CDS Desru_2824 NC_015589.1 2893073 2893954 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1258 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2893073..2893954 Desulfotomaculum ruminis DSM 2154 10739235 YP_004546325.1 CDS Desru_2825 NC_015589.1 2894051 2895073 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: drm:Dred_1257 FMN-dependent alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 2894051..2895073 Desulfotomaculum ruminis DSM 2154 10739236 YP_004546326.1 CDS Desru_2826 NC_015589.1 2895128 2895760 R KEGG: drm:Dred_1256 signal-transduction protein; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein; hypothetical protein complement(2895128..2895760) Desulfotomaculum ruminis DSM 2154 10739237 YP_004546327.1 CDS Desru_2827 NC_015589.1 2895875 2896522 R PFAM: flavin reductase domain protein FMN-binding; KEGG: drm:Dred_1255 flavin reductase domain-containing protein; flavin reductase domain-containing protein complement(2895875..2896522) Desulfotomaculum ruminis DSM 2154 10739238 YP_004546328.1 CDS Desru_2828 NC_015589.1 2896595 2897329 R PFAM: Methyltransferase type 11; KEGG: drm:Dred_1254 methyltransferase type 11; type 11 methyltransferase complement(2896595..2897329) Desulfotomaculum ruminis DSM 2154 10739239 YP_004546329.1 CDS Desru_2829 NC_015589.1 2897501 2897710 D KEGG: dae:Dtox_0008 hypothetical protein; hypothetical protein 2897501..2897710 Desulfotomaculum ruminis DSM 2154 10739240 YP_004546330.1 CDS Desru_2830 NC_015589.1 2898019 2898903 R TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: drm:Dred_1253 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; L-serine dehydratase iron-sulfur-dependent subunit alpha complement(2898019..2898903) Desulfotomaculum ruminis DSM 2154 10739241 YP_004546331.1 CDS Desru_2831 NC_015589.1 2898922 2899584 R TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: drm:Dred_1252 L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein; L-serine dehydratase iron-sulfur-dependent subunit beta complement(2898922..2899584) Desulfotomaculum ruminis DSM 2154 10739242 YP_004546332.1 CDS Desru_2832 NC_015589.1 2899776 2900252 D KEGG: drm:Dred_1251 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 2899776..2900252 Desulfotomaculum ruminis DSM 2154 10739243 YP_004546333.1 CDS Desru_2833 NC_015589.1 2900316 2900966 R KEGG: drm:Dred_1249 hypothetical protein; hypothetical protein complement(2900316..2900966) Desulfotomaculum ruminis DSM 2154 10739244 YP_004546334.1 CDS Desru_2834 NC_015589.1 2901251 2901721 D KEGG: drm:Dred_1248 hypothetical protein; hypothetical protein 2901251..2901721 Desulfotomaculum ruminis DSM 2154 10739245 YP_004546335.1 CDS Desru_2835 NC_015589.1 2901718 2901942 R KEGG: drm:Dred_1247 hypothetical protein; hypothetical protein complement(2901718..2901942) Desulfotomaculum ruminis DSM 2154 10739246 YP_004546336.1 CDS Desru_2836 NC_015589.1 2901952 2902158 R KEGG: drm:Dred_1246 hypothetical protein; hypothetical protein complement(2901952..2902158) Desulfotomaculum ruminis DSM 2154 10739247 YP_004546337.1 CDS Desru_2837 NC_015589.1 2902283 2903368 D PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1245 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2902283..2903368 Desulfotomaculum ruminis DSM 2154 10739248 YP_004546338.1 CDS Desru_2838 NC_015589.1 2903770 2904909 D KEGG: drm:Dred_1243 hypothetical protein; hypothetical protein 2903770..2904909 Desulfotomaculum ruminis DSM 2154 10739249 YP_004546339.1 CDS Desru_2839 NC_015589.1 2904914 2906206 R KEGG: tjr:TherJR_2408 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase complement(2904914..2906206) Desulfotomaculum ruminis DSM 2154 10739250 YP_004546340.1 CDS Desru_2840 NC_015589.1 2906209 2906799 R KEGG: pth:PTH_1661 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Indolepyruvate ferredoxin oxidoreductase complement(2906209..2906799) Desulfotomaculum ruminis DSM 2154 10739251 YP_004546341.1 CDS Desru_2841 NC_015589.1 2906796 2908598 R KEGG: tjr:TherJR_2410 indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; indolepyruvate ferredoxin oxidoreductase subunit alpha complement(2906796..2908598) Desulfotomaculum ruminis DSM 2154 10739252 YP_004546342.1 CDS Desru_2842 NC_015589.1 2908613 2909407 R PFAM: cobalt transport protein; KEGG: pth:PTH_1659 ABC-type cobalt transport system, permease component CbiQ and related transporters; cobalt transport protein complement(2908613..2909407) Desulfotomaculum ruminis DSM 2154 10739253 YP_004546343.1 CDS Desru_2843 NC_015589.1 2909408 2910253 R KEGG: pth:PTH_1658 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2909408..2910253) Desulfotomaculum ruminis DSM 2154 10739254 YP_004546344.1 CDS Desru_2844 NC_015589.1 2910250 2911110 R KEGG: pth:PTH_1657 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2910250..2911110) Desulfotomaculum ruminis DSM 2154 10739255 YP_004546345.1 CDS Desru_2845 NC_015589.1 2911137 2911688 R KEGG: pth:PTH_1656 hypothetical protein; hypothetical protein complement(2911137..2911688) Desulfotomaculum ruminis DSM 2154 10739256 YP_004546346.1 CDS Desru_2846 NC_015589.1 2911920 2912513 R KEGG: drm:Dred_1242 SirA family protein; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA-like domain-containing protein; selenium metabolism protein YedF complement(2911920..2912513) Desulfotomaculum ruminis DSM 2154 10739257 YP_004546347.1 CDS Desru_2847 NC_015589.1 2912516 2913562 R manually curated; TIGRFAM: selenide, water dikinase; KEGG: drm:Dred_1241 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide water dikinase complement(2912516..2913562) Desulfotomaculum ruminis DSM 2154 10739258 YP_004546348.1 CDS Desru_2848 NC_015589.1 2913778 2914581 D TIGRFAM: glutamate racemase; KEGG: drm:Dred_1240 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 2913778..2914581 Desulfotomaculum ruminis DSM 2154 10739259 YP_004546349.1 CDS Desru_2849 NC_015589.1 2914989 2915837 D KEGG: ckr:CKR_2656 hypothetical protein; hypothetical protein 2914989..2915837 Desulfotomaculum ruminis DSM 2154 10739260 YP_004546350.1 CDS Desru_2850 NC_015589.1 2915972 2916658 D KEGG: ckr:CKR_2655 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 2915972..2916658 Desulfotomaculum ruminis DSM 2154 10739261 YP_004546351.1 CDS Desru_2851 NC_015589.1 2916660 2917952 D KEGG: ckr:CKR_2654 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein 2916660..2917952 Desulfotomaculum ruminis DSM 2154 10739262 YP_004546352.1 CDS Desru_2852 NC_015589.1 2917952 2918098 D hypothetical protein 2917952..2918098 Desulfotomaculum ruminis DSM 2154 10739263 YP_004546353.1 CDS Desru_2853 NC_015589.1 2918264 2918653 D KEGG: drm:Dred_1551 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0150; hypothetical protein 2918264..2918653 Desulfotomaculum ruminis DSM 2154 10739264 YP_004546354.1 CDS Desru_2854 NC_015589.1 2918699 2919298 R PFAM: Manganese/iron superoxide dismutase-like; KEGG: drm:Dred_1239 superoxide dismutase; manganese/iron superoxide dismutase-like protein complement(2918699..2919298) Desulfotomaculum ruminis DSM 2154 10739265 YP_004546355.1 CDS Desru_2855 NC_015589.1 2919404 2919580 R hypothetical protein complement(2919404..2919580) Desulfotomaculum ruminis DSM 2154 10739266 YP_004546356.1 CDS Desru_2856 NC_015589.1 2919758 2920276 D KEGG: drm:Dred_1238 hypothetical protein; hypothetical protein 2919758..2920276 Desulfotomaculum ruminis DSM 2154 10739267 YP_004546357.1 CDS Desru_2857 NC_015589.1 2920335 2921546 R PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY4398 hypothetical protein; N-acetyltransferase GCN5 complement(2920335..2921546) Desulfotomaculum ruminis DSM 2154 10739268 YP_004546358.1 CDS Desru_2858 NC_015589.1 2921927 2922382 R PFAM: PilT protein domain protein; KEGG: dau:Daud_2130 PilT domain-containing protein; PilT protein domain-containing protein complement(2921927..2922382) Desulfotomaculum ruminis DSM 2154 10739269 YP_004546359.1 CDS Desru_2859 NC_015589.1 2922375 2922671 R TIGRFAM: prevent-host-death family protein; KEGG: dau:Daud_2131 prevent-host-death family protein; prevent-host-death family protein complement(2922375..2922671) Desulfotomaculum ruminis DSM 2154 10739270 YP_004546360.1 CDS Desru_2860 NC_015589.1 2922841 2923296 R KEGG: drm:Dred_1237 hypothetical protein; hypothetical protein complement(2922841..2923296) Desulfotomaculum ruminis DSM 2154 10739271 YP_004546361.1 CDS Desru_2861 NC_015589.1 2923561 2924553 D PFAM: filamentation induced by cAMP protein Fic; KEGG: cbi:CLJ_0087 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 2923561..2924553 Desulfotomaculum ruminis DSM 2154 10739272 YP_004546362.1 CDS Desru_2862 NC_015589.1 2924550 2925401 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_0863 phage integrase domain/SAM domain-containing protein; integrase family protein 2924550..2925401 Desulfotomaculum ruminis DSM 2154 10739273 YP_004546363.1 CDS Desru_2863 NC_015589.1 2925505 2926683 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_2788 hypothetical protein; copper amine oxidase-like domain-containing protein complement(2925505..2926683) Desulfotomaculum ruminis DSM 2154 10739274 YP_004546364.1 CDS Desru_2864 NC_015589.1 2926858 2927277 D KEGG: dae:Dtox_2795 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 2926858..2927277 Desulfotomaculum ruminis DSM 2154 10739275 YP_004546365.1 CDS Desru_2865 NC_015589.1 2927341 2927892 D KEGG: drm:Dred_1497 hypothetical protein; hypothetical protein 2927341..2927892 Desulfotomaculum ruminis DSM 2154 10739276 YP_004546366.1 CDS Desru_2866 NC_015589.1 2928060 2928926 R KEGG: cak:Caul_1611 hypothetical protein; hypothetical protein complement(2928060..2928926) Desulfotomaculum ruminis DSM 2154 10739277 YP_004546367.1 CDS Desru_2867 NC_015589.1 2929188 2929688 D KEGG: dae:Dtox_0384 hypothetical protein; hypothetical protein 2929188..2929688 Desulfotomaculum ruminis DSM 2154 10739278 YP_004546368.1 CDS Desru_2868 NC_015589.1 2929657 2930511 D KEGG: dae:Dtox_0385 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; ATP-binding protein 2929657..2930511 Desulfotomaculum ruminis DSM 2154 10739279 YP_004546369.1 CDS Desru_2869 NC_015589.1 2930508 2931104 D KEGG: dae:Dtox_0386 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; Accessory gene regulator B 2930508..2931104 Desulfotomaculum ruminis DSM 2154 10739280 YP_004546370.1 CDS Desru_2870 NC_015589.1 2931126 2931248 D KEGG: dae:Dtox_0387 hypothetical protein; hypothetical protein 2931126..2931248 Desulfotomaculum ruminis DSM 2154 10739281 YP_004546371.1 CDS Desru_2871 NC_015589.1 2931280 2931996 D KEGG: dae:Dtox_0388 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; LytTr DNA-binding protein 2931280..2931996 Desulfotomaculum ruminis DSM 2154 10739282 YP_004546372.1 CDS Desru_2872 NC_015589.1 2932023 2932304 R KEGG: pmc:P9515_06421 type II alternative sigma-70 family RNA polymerase sigma factor; hypothetical protein complement(2932023..2932304) Desulfotomaculum ruminis DSM 2154 10739283 YP_004546373.1 CDS Desru_2873 NC_015589.1 2932696 2933115 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dae:Dtox_3977 protein of unknown function DUF6 transmembrane; hypothetical protein 2932696..2933115 Desulfotomaculum ruminis DSM 2154 10739284 YP_004546374.1 CDS Desru_2874 NC_015589.1 2933186 2934658 D PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: drm:Dred_1815 Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase major region 2933186..2934658 Desulfotomaculum ruminis DSM 2154 10739285 YP_004546375.1 CDS Desru_2875 NC_015589.1 2934662 2935597 R PFAM: VanW family protein; KEGG: dae:Dtox_3975 VanW family protein; VanW family protein complement(2934662..2935597) Desulfotomaculum ruminis DSM 2154 10739286 YP_004546376.1 CDS Desru_2876 NC_015589.1 2935916 2936878 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_2744 hypothetical protein; copper amine oxidase-like domain-containing protein complement(2935916..2936878) Desulfotomaculum ruminis DSM 2154 10739287 YP_004546377.1 CDS Desru_2877 NC_015589.1 2937006 2938886 R KEGG: dae:Dtox_2733 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein complement(2937006..2938886) Desulfotomaculum ruminis DSM 2154 10739288 YP_004546378.1 CDS Desru_2878 NC_015589.1 2938883 2940685 R KEGG: pjd:Pjdr2_2052 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein complement(2938883..2940685) Desulfotomaculum ruminis DSM 2154 10739289 YP_004546379.1 CDS Desru_2879 NC_015589.1 2940783 2941562 D KEGG: drm:Dred_1516 hypothetical protein; hypothetical protein 2940783..2941562 Desulfotomaculum ruminis DSM 2154 10739290 YP_004546380.1 CDS Desru_2880 NC_015589.1 2941565 2941930 D KEGG: drm:Dred_1515 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; regulatory protein GntR 2941565..2941930 Desulfotomaculum ruminis DSM 2154 10739291 YP_004546381.1 CDS Desru_2881 NC_015589.1 2941953 2942651 D KEGG: drm:Dred_1514 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2941953..2942651 Desulfotomaculum ruminis DSM 2154 10739292 YP_004546382.1 CDS Desru_2882 NC_015589.1 2942849 2943562 R KEGG: hmo:HM1_1252 hypothetical protein; hypothetical protein complement(2942849..2943562) Desulfotomaculum ruminis DSM 2154 10739293 YP_004546383.1 CDS Desru_2883 NC_015589.1 2943733 2945121 R PFAM: amino acid permease-associated region; KEGG: clj:CLJU_c16020 putative aminoacid permease; amino acid permease-associated protein complement(2943733..2945121) Desulfotomaculum ruminis DSM 2154 10739294 YP_004546384.1 CDS Desru_2884 NC_015589.1 2945221 2946339 R KEGG: drm:Dred_2866 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase complement(2945221..2946339) Desulfotomaculum ruminis DSM 2154 10739295 YP_004546385.1 CDS Desru_2885 NC_015589.1 2946647 2947858 R KEGG: cce:Ccel_2534 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase complement(2946647..2947858) Desulfotomaculum ruminis DSM 2154 10739296 YP_004546386.1 CDS Desru_2886 NC_015589.1 2947848 2948561 R KEGG: drm:Dred_3250 transcriptional regulator, TrmB; transcriptional regulator TrmB complement(2947848..2948561) Desulfotomaculum ruminis DSM 2154 10739297 YP_004546387.1 CDS Desru_2887 NC_015589.1 2949200 2950261 D KEGG: dhd:Dhaf_0985 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2949200..2950261 Desulfotomaculum ruminis DSM 2154 10739298 YP_004546388.1 CDS Desru_2888 NC_015589.1 2950539 2951198 D KEGG: bpf:BpOF4_03320 hypothetical protein; TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204; sporulation protein YtaF 2950539..2951198 Desulfotomaculum ruminis DSM 2154 10739299 YP_004546389.1 CDS Desru_2889 NC_015589.1 2951780 2952001 R KEGG: cnb:CNBM1940 hypothetical protein; hypothetical protein complement(2951780..2952001) Desulfotomaculum ruminis DSM 2154 10739300 YP_004546390.1 CDS Desru_2890 NC_015589.1 2952190 2952453 R KEGG: drm:Dred_2587 hypothetical protein; hypothetical protein complement(2952190..2952453) Desulfotomaculum ruminis DSM 2154 10739301 YP_004546391.1 CDS Desru_2891 NC_015589.1 2952597 2953238 R KEGG: swd:Swoo_4297 hypothetical protein; hypothetical protein complement(2952597..2953238) Desulfotomaculum ruminis DSM 2154 10739302 YP_004546392.1 CDS Desru_2892 NC_015589.1 2953359 2953760 R manually curated; KEGG: nhl:Nhal_1453 hypothetical protein; hypothetical protein complement(2953359..2953760) Desulfotomaculum ruminis DSM 2154 10739303 YP_004546393.1 CDS Desru_2893 NC_015589.1 2954072 2954191 D KEGG: bmd:BMD_3390 hypothetical protein; hypothetical protein 2954072..2954191 Desulfotomaculum ruminis DSM 2154 10739304 YP_004546394.1 CDS Desru_2894 NC_015589.1 2954326 2955000 R KEGG: cbe:Cbei_3861 TetR family transcriptional regulator; manually curated; PFAM: regulatory protein TetR; regulatory protein TetR complement(2954326..2955000) Desulfotomaculum ruminis DSM 2154 10739305 YP_004546395.1 CDS Desru_2895 NC_015589.1 2955685 2956482 R KEGG: drm:Dred_1180 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(2955685..2956482) Desulfotomaculum ruminis DSM 2154 10739307 YP_004546396.1 CDS Desru_2896 NC_015589.1 2956793 2957581 R KEGG: cts:Ctha_1162 Ppx/GppA phosphatase; hypothetical protein complement(2956793..2957581) Desulfotomaculum ruminis DSM 2154 10739308 YP_004546397.1 CDS Desru_2897 NC_015589.1 2957571 2958287 R PFAM: thymidylate kinase; KEGG: gur:Gura_2642 thymidylate kinase; thymidylate kinase complement(2957571..2958287) Desulfotomaculum ruminis DSM 2154 10739309 YP_004546398.1 CDS Desru_2898 NC_015589.1 2958290 2959012 R KEGG: gur:Gura_2566 dTMP kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase complement(2958290..2959012) Desulfotomaculum ruminis DSM 2154 10739310 YP_004546399.1 CDS Desru_2899 NC_015589.1 2959009 2960532 R PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_1179 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(2959009..2960532) Desulfotomaculum ruminis DSM 2154 10739311 YP_004546400.1 CDS Desru_2900 NC_015589.1 2960799 2962259 R PFAM: VanW family protein; G5 domain protein; KEGG: drm:Dred_1178 VanW family protein; VanW family protein complement(2960799..2962259) Desulfotomaculum ruminis DSM 2154 10739312 YP_004546401.1 CDS Desru_2901 NC_015589.1 2962430 2964181 R KEGG: drm:Dred_1557 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein complement(2962430..2964181) Desulfotomaculum ruminis DSM 2154 10739313 YP_004546402.1 CDS Desru_2902 NC_015589.1 2964441 2965298 D KEGG: drm:Dred_1176 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein 2964441..2965298 Desulfotomaculum ruminis DSM 2154 10739314 YP_004546403.1 CDS Desru_2903 NC_015589.1 2965403 2966110 D KEGG: drm:Dred_1175 hypothetical protein; hypothetical protein 2965403..2966110 Desulfotomaculum ruminis DSM 2154 10739315 YP_004546404.1 CDS Desru_2904 NC_015589.1 2966138 2966329 R KEGG: oaa:100086485 hypothetical protein LOC100086485; hypothetical protein complement(2966138..2966329) Desulfotomaculum ruminis DSM 2154 10739316 YP_004546405.1 CDS Desru_2905 NC_015589.1 2966435 2966650 R KEGG: cdu:CD36_50770 NEDD8-activating enzyme E1 regulatory subunit, putative; NEDD8-activating enzyme E1 regulatory subunit complement(2966435..2966650) Desulfotomaculum ruminis DSM 2154 10739317 YP_004546406.1 CDS Desru_2906 NC_015589.1 2966716 2968338 R PFAM: protein of unknown function UCP012535; KEGG: drm:Dred_1174 hypothetical protein; hypothetical protein complement(2966716..2968338) Desulfotomaculum ruminis DSM 2154 10739318 YP_004546407.1 CDS Desru_2907 NC_015589.1 2968430 2969332 R PFAM: Ion transport 2 domain protein; KEGG: drm:Dred_1173 ion transport 2 domain-containing protein; Ion transport 2 domain-containing protein complement(2968430..2969332) Desulfotomaculum ruminis DSM 2154 10739319 YP_004546408.1 CDS Desru_2908 NC_015589.1 2969453 2969689 R KEGG: drm:Dred_1172 FmdB family regulatory protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein complement(2969453..2969689) Desulfotomaculum ruminis DSM 2154 10739320 YP_004546409.1 CDS Desru_2909 NC_015589.1 2969858 2970079 D KEGG: swo:Swol_1697 copper ion-binding; copper ion-binding protein 2969858..2970079 Desulfotomaculum ruminis DSM 2154 10739321 YP_004546410.1 CDS Desru_2910 NC_015589.1 2970131 2970592 R KEGG: drm:Dred_1171 hypothetical protein; hypothetical protein complement(2970131..2970592) Desulfotomaculum ruminis DSM 2154 10739322 YP_004546411.1 CDS Desru_2911 NC_015589.1 2970673 2971764 R KEGG: drm:Dred_1850 hypothetical protein; hypothetical protein complement(2970673..2971764) Desulfotomaculum ruminis DSM 2154 10739323 YP_004546412.1 CDS Desru_2912 NC_015589.1 2972176 2973276 D TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: drm:Dred_1170 glutamate 5-kinase; SMART: PUA domain containing protein; glutamate 5-kinase 2972176..2973276 Desulfotomaculum ruminis DSM 2154 10739324 YP_004546413.1 CDS Desru_2913 NC_015589.1 2973264 2974511 D KEGG: drm:Dred_1169 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 2973264..2974511 Desulfotomaculum ruminis DSM 2154 10739325 YP_004546414.1 CDS Desru_2914 NC_015589.1 2974528 2975358 D TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: drm:Dred_1168 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 2974528..2975358 Desulfotomaculum ruminis DSM 2154 10739326 YP_004546415.1 CDS Desru_2915 NC_015589.1 2975494 2975922 R PFAM: UspA domain-containing protein; KEGG: vdi:Vdis_2198 UspA domain-containing protein; UspA domain-containing protein complement(2975494..2975922) Desulfotomaculum ruminis DSM 2154 10739327 YP_004546416.1 CDS Desru_2916 NC_015589.1 2976063 2976485 R PFAM: UspA domain-containing protein; KEGG: amt:Amet_1447 UspA domain-containing protein; UspA domain-containing protein complement(2976063..2976485) Desulfotomaculum ruminis DSM 2154 10739328 YP_004546417.1 CDS Desru_2917 NC_015589.1 2976815 2977174 D PFAM: Penicillinase repressor; KEGG: dsy:DSY1014 hypothetical protein; penicillinase repressor 2976815..2977174 Desulfotomaculum ruminis DSM 2154 10739329 YP_004546418.1 CDS Desru_2918 NC_015589.1 2977174 2978649 D PFAM: peptidase M56 BlaR1; KEGG: cth:Cthe_3127 peptidase M56, BlaR1; peptidase M56 BlaR1 2977174..2978649 Desulfotomaculum ruminis DSM 2154 10739330 YP_004546419.1 CDS Desru_2919 NC_015589.1 2978794 2979267 D KEGG: dhd:Dhaf_2461 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 2978794..2979267 Desulfotomaculum ruminis DSM 2154 10739331 YP_004546420.1 CDS Desru_2920 NC_015589.1 2979422 2980657 D PFAM: major facilitator superfamily MFS_1; KEGG: clj:CLJU_c14140 putative permease; major facilitator superfamily protein 2979422..2980657 Desulfotomaculum ruminis DSM 2154 10739332 YP_004546421.1 CDS Desru_2921 NC_015589.1 2980893 2982476 R KEGG: dhd:Dhaf_3297 putative ABC transporter; putative ABC transporter complement(2980893..2982476) Desulfotomaculum ruminis DSM 2154 10739333 YP_004546422.1 CDS Desru_2922 NC_015589.1 2982479 2983213 R KEGG: dhd:Dhaf_3296 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2982479..2983213) Desulfotomaculum ruminis DSM 2154 10739334 YP_004546423.1 CDS Desru_2923 NC_015589.1 2983226 2983852 R PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_3295 transcriptional regulator, TetR family; regulatory protein TetR complement(2983226..2983852) Desulfotomaculum ruminis DSM 2154 10739335 YP_004546424.1 CDS Desru_2924 NC_015589.1 2983963 2986476 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dsy:DSY2123 phosphoenolpyruvate synthase; pyruvate phosphate dikinase PEP/pyruvate-binding protein complement(2983963..2986476) Desulfotomaculum ruminis DSM 2154 10739336 YP_004546425.1 CDS Desru_2925 NC_015589.1 2986473 2987075 R PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_3293 transcriptional regulator, TetR family; regulatory protein TetR complement(2986473..2987075) Desulfotomaculum ruminis DSM 2154 10739337 YP_004546426.1 CDS Desru_2926 NC_015589.1 2987404 2988618 R KEGG: drm:Dred_1167 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase complement(2987404..2988618) Desulfotomaculum ruminis DSM 2154 10739338 YP_004546427.1 CDS Desru_2927 NC_015589.1 2988675 2989577 R KEGG: drm:Dred_1166 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; homoserine kinase complement(2988675..2989577) Desulfotomaculum ruminis DSM 2154 10739339 YP_004546428.1 CDS Desru_2928 NC_015589.1 2989587 2990879 R KEGG: drm:Dred_1165 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; Homoserine dehydrogenase complement(2989587..2990879) Desulfotomaculum ruminis DSM 2154 10739340 YP_004546429.1 CDS Desru_2929 NC_015589.1 2990909 2991355 R PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_1164 hypothetical protein; amino acid-binding ACT domain-containing protein complement(2990909..2991355) Desulfotomaculum ruminis DSM 2154 10739341 YP_004546430.1 CDS Desru_2930 NC_015589.1 2991848 2993326 R KEGG: drm:Dred_1163 stage IV sporulation protein A; TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A; stage IV sporulation protein A complement(2991848..2993326) Desulfotomaculum ruminis DSM 2154 10739342 YP_004546431.1 CDS Desru_2931 NC_015589.1 2993739 2993924 D KEGG: fgr:FG07651.1 hypothetical protein; hypothetical protein 2993739..2993924 Desulfotomaculum ruminis DSM 2154 10739343 YP_004546432.1 CDS Desru_2932 NC_015589.1 2993954 2995012 R PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: drm:Dred_1162 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein complement(2993954..2995012) Desulfotomaculum ruminis DSM 2154 10739344 YP_004546433.1 CDS Desru_2933 NC_015589.1 2995029 2995622 R PFAM: protein of unknown function DUF205; KEGG: drm:Dred_1161 hypothetical protein; hypothetical protein complement(2995029..2995622) Desulfotomaculum ruminis DSM 2154 10739345 YP_004546434.1 CDS Desru_2934 NC_015589.1 2995679 2997001 R KEGG: drm:Dred_1160 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA complement(2995679..2997001) Desulfotomaculum ruminis DSM 2154 10739346 YP_004546435.1 CDS Desru_2935 NC_015589.1 2997110 2998423 R PFAM: protein of unknown function DUF512; KEGG: drm:Dred_1159 hypothetical protein; hypothetical protein complement(2997110..2998423) Desulfotomaculum ruminis DSM 2154 10739347 YP_004546436.1 CDS Desru_2936 NC_015589.1 2998488 2998670 R KEGG: drm:Dred_1158 hypothetical protein; hypothetical protein complement(2998488..2998670) Desulfotomaculum ruminis DSM 2154 10739348 YP_004546437.1 CDS Desru_2937 NC_015589.1 2998688 2999578 R KEGG: drm:Dred_1157 hypothetical protein; hypothetical protein complement(2998688..2999578) Desulfotomaculum ruminis DSM 2154 10739349 YP_004546438.1 CDS Desru_2938 NC_015589.1 2999735 3001015 R KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; stage II sporulation protein P complement(2999735..3001015) Desulfotomaculum ruminis DSM 2154 10739350 YP_004546439.1 CDS Desru_2939 NC_015589.1 3001005 3001784 R PFAM: protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator; hypothetical protein complement(3001005..3001784) Desulfotomaculum ruminis DSM 2154 10739351 YP_004546440.1 CDS Desru_2940 NC_015589.1 3002382 3003710 D PFAM: Uncharacterised protein family UPF0324; KEGG: dhd:Dhaf_4671 hypothetical protein; hypothetical protein 3002382..3003710 Desulfotomaculum ruminis DSM 2154 10739352 YP_004546441.1 CDS Desru_2941 NC_015589.1 3003784 3004152 R KEGG: dhd:Dhaf_4669 hypothetical protein; hypothetical protein complement(3003784..3004152) Desulfotomaculum ruminis DSM 2154 10739353 YP_004546442.1 CDS Desru_2942 NC_015589.1 3004295 3004639 R PFAM: RNA binding S1 domain protein; KEGG: drm:Dred_1154 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; RNA binding S1 domain-containing protein complement(3004295..3004639) Desulfotomaculum ruminis DSM 2154 10739354 YP_004546443.1 CDS Desru_2943 NC_015589.1 3004740 3005096 R KEGG: cbt:CLH_1650 sensory transduction histidine kinase; sensory transduction histidine kinase complement(3004740..3005096) Desulfotomaculum ruminis DSM 2154 10739355 YP_004546444.1 CDS Desru_2945 NC_015589.1 3005965 3006150 R KEGG: zpr:ZPR_2280 two-component system sensor histidine kinase/methyl-esterase/transferase hybrid; hypothetical protein complement(3005965..3006150) Desulfotomaculum ruminis DSM 2154 10739357 YP_004546445.1 CDS Desru_2946 NC_015589.1 3006147 3011219 R KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; YD repeat protein complement(3006147..3011219) Desulfotomaculum ruminis DSM 2154 10739358 YP_004546446.1 CDS Desru_2947 NC_015589.1 3011234 3012070 R KEGG: ptm:GSPATT00021540001 hypothetical protein; hypothetical protein complement(3011234..3012070) Desulfotomaculum ruminis DSM 2154 10739359 YP_004546447.1 CDS Desru_2948 NC_015589.1 3012126 3013355 R KEGG: chl:Chy400_3530 bacillolysin; hypothetical protein complement(3012126..3013355) Desulfotomaculum ruminis DSM 2154 10739360 YP_004546448.1 CDS Desru_2949 NC_015589.1 3013371 3014222 R KEGG: brm:Bmur_1934 hypothetical protein; hypothetical protein complement(3013371..3014222) Desulfotomaculum ruminis DSM 2154 10739361 YP_004546449.1 CDS Desru_2950 NC_015589.1 3014541 3016556 R KEGG: drm:Dred_1154 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein; hydroxymethylbutenyl pyrophosphate reductase complement(3014541..3016556) Desulfotomaculum ruminis DSM 2154 10739362 YP_004546450.1 CDS Desru_2951 NC_015589.1 3016596 3017177 R TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: drm:Dred_1153 1-acyl-sn-glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(3016596..3017177) Desulfotomaculum ruminis DSM 2154 10739363 YP_004546451.1 CDS Desru_2952 NC_015589.1 3017187 3017867 R KEGG: drm:Dred_1152 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase; cytidylate kinase complement(3017187..3017867) Desulfotomaculum ruminis DSM 2154 10739364 YP_004546452.1 CDS Desru_2953 NC_015589.1 3017982 3019271 R KEGG: drm:Dred_1151 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase complement(3017982..3019271) Desulfotomaculum ruminis DSM 2154 10739365 YP_004546453.1 CDS Desru_2954 NC_015589.1 3019276 3020151 R PFAM: Prephenate dehydrogenase; KEGG: drm:Dred_1150 prephenate dehydrogenase; prephenate dehydrogenase complement(3019276..3020151) Desulfotomaculum ruminis DSM 2154 10739366 YP_004546454.1 CDS Desru_2955 NC_015589.1 3020371 3021393 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: pth:PTH_1622 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3020371..3021393) Desulfotomaculum ruminis DSM 2154 10739367 YP_004546455.1 CDS Desru_2956 NC_015589.1 3021702 3022886 D PFAM: aminotransferase class I and II; KEGG: drm:Dred_1148 aspartate aminotransferase; class I and II aminotransferase 3021702..3022886 Desulfotomaculum ruminis DSM 2154 10739368 YP_004546456.1 CDS Desru_2957 NC_015589.1 3023238 3023351 D KEGG: bay:RBAM_011820 hypothetical protein; hypothetical protein 3023238..3023351 Desulfotomaculum ruminis DSM 2154 10739369 YP_004546457.1 CDS Desru_2958 NC_015589.1 3023521 3023631 D KEGG: bmd:BMD_1324 hypothetical protein; hypothetical protein 3023521..3023631 Desulfotomaculum ruminis DSM 2154 10739370 YP_004546458.1 CDS Desru_2959 NC_015589.1 3023685 3024053 R KEGG: drm:Dred_1146 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; chorismate mutase complement(3023685..3024053) Desulfotomaculum ruminis DSM 2154 10739371 YP_004546459.1 CDS Desru_2960 NC_015589.1 3024071 3024493 R PFAM: HutP family protein; KEGG: drm:Dred_1145 hypothetical protein; HutP family protein complement(3024071..3024493) Desulfotomaculum ruminis DSM 2154 10739372 YP_004546460.1 CDS Desru_2961 NC_015589.1 3024605 3025072 R KEGG: swo:Swol_1397 hypothetical protein; hypothetical protein complement(3024605..3025072) Desulfotomaculum ruminis DSM 2154 10739373 YP_004546461.1 CDS Desru_2962 NC_015589.1 3025129 3025587 R KEGG: drm:Dred_1144 hypothetical protein; hypothetical protein complement(3025129..3025587) Desulfotomaculum ruminis DSM 2154 10739374 YP_004546462.1 CDS Desru_2963 NC_015589.1 3025653 3025892 R KEGG: drm:Dred_1143 hypothetical protein; hypothetical protein complement(3025653..3025892) Desulfotomaculum ruminis DSM 2154 10739375 YP_004546463.1 CDS Desru_2964 NC_015589.1 3025964 3026839 R KEGG: drm:Dred_1142 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase complement(3025964..3026839) Desulfotomaculum ruminis DSM 2154 10739376 YP_004546464.1 CDS Desru_2965 NC_015589.1 3027075 3027605 R PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_1141 nucleoside recognition domain-containing protein; nucleoside recognition domain-containing protein complement(3027075..3027605) Desulfotomaculum ruminis DSM 2154 10739377 YP_004546465.1 CDS Desru_2966 NC_015589.1 3027610 3028200 R PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_1140 nucleoside recognition domain-containing protein; nucleoside recognition domain-containing protein complement(3027610..3028200) Desulfotomaculum ruminis DSM 2154 10739378 YP_004546466.1 CDS Desru_2967 NC_015589.1 3028253 3030001 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: drm:Dred_1139 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS sensor protein complement(3028253..3030001) Desulfotomaculum ruminis DSM 2154 10739379 YP_004546467.1 CDS Desru_2968 NC_015589.1 3030127 3030510 R manually curated; TIGRFAM: sporulation protein YtfJ; KEGG: drm:Dred_1138 hypothetical protein; PFAM: Sporulation protein YtfJ; sporulation protein YtfJ complement(3030127..3030510) Desulfotomaculum ruminis DSM 2154 10739380 YP_004546468.1 CDS Desru_2969 NC_015589.1 3030485 3031186 R KEGG: drm:Dred_1137 hypothetical protein; hypothetical protein complement(3030485..3031186) Desulfotomaculum ruminis DSM 2154 10739381 YP_004546469.1 CDS Desru_2970 NC_015589.1 3031436 3032293 R PFAM: Spore germination protein-like Gmad2, bacteria; KEGG: drm:Dred_1136 hypothetical protein; Spore germination protein-like Gmad2 complement(3031436..3032293) Desulfotomaculum ruminis DSM 2154 10739382 YP_004546470.1 CDS Desru_2971 NC_015589.1 3032427 3032972 R KEGG: drm:Dred_1135 putative transcriptional regulator; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; segregation and condensation protein B complement(3032427..3032972) Desulfotomaculum ruminis DSM 2154 10739383 YP_004546471.1 CDS Desru_2972 NC_015589.1 3032969 3033724 R PFAM: chromosome segregation and condensation protein ScpA; KEGG: drm:Dred_1134 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA complement(3032969..3033724) Desulfotomaculum ruminis DSM 2154 10739384 YP_004546472.1 CDS Desru_2973 NC_015589.1 3033927 3034916 R TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: drm:Dred_1133 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase complement(3033927..3034916) Desulfotomaculum ruminis DSM 2154 10739385 YP_004546473.1 CDS Desru_2974 NC_015589.1 3034939 3035559 R PFAM: peptidase M50; KEGG: drm:Dred_1132 peptidase M50; peptidase M50 complement(3034939..3035559) Desulfotomaculum ruminis DSM 2154 10739386 YP_004546474.1 CDS Desru_2975 NC_015589.1 3035552 3038536 R KEGG: drm:Dred_1131 polynucleotide adenylyltransferase region; PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; Polynucleotide adenylyltransferase region; SMART: CBS domain containing protein; hypothetical protein complement(3035552..3038536) Desulfotomaculum ruminis DSM 2154 10739387 YP_004546475.1 CDS Desru_2976 NC_015589.1 3038572 3039912 R KEGG: drm:Dred_1130 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase complement(3038572..3039912) Desulfotomaculum ruminis DSM 2154 10739388 YP_004546476.1 CDS Desru_2977 NC_015589.1 3040159 3040326 R PFAM: small acid-soluble spore P family protein; KEGG: hmo:HM1_0390 hypothetical protein; small acid-soluble spore P family protein complement(3040159..3040326) Desulfotomaculum ruminis DSM 2154 10739389 YP_004546477.1 CDS Desru_2978 NC_015589.1 3040440 3040697 R KEGG: drm:Dred_1125 hypothetical protein; hypothetical protein complement(3040440..3040697) Desulfotomaculum ruminis DSM 2154 10739390 YP_004546478.1 CDS Desru_2979 NC_015589.1 3040858 3043020 R KEGG: drm:Dred_1124 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Tex-like protein complement(3040858..3043020) Desulfotomaculum ruminis DSM 2154 10739391 YP_004546479.1 CDS Desru_2980 NC_015589.1 3043262 3043942 D KEGG: clj:CLJU_c19190 hypothetical protein; hypothetical protein 3043262..3043942 Desulfotomaculum ruminis DSM 2154 10739392 YP_004546480.1 CDS Desru_2981 NC_015589.1 3044026 3044820 D PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region; integrase catalytic subunit 3044026..3044820 Desulfotomaculum ruminis DSM 2154 10739393 YP_004546481.1 CDS Desru_2982 NC_015589.1 3044900 3045886 R KEGG: drm:Dred_1123 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase complement(3044900..3045886) Desulfotomaculum ruminis DSM 2154 10739394 YP_004546482.1 CDS Desru_2983 NC_015589.1 3045886 3046986 R KEGG: drm:Dred_1122 hypothetical protein; hypothetical protein complement(3045886..3046986) Desulfotomaculum ruminis DSM 2154 10739395 YP_004546483.1 CDS Desru_2984 NC_015589.1 3046983 3047963 R PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: drm:Dred_1121 hypothetical protein; hypothetical protein complement(3046983..3047963) Desulfotomaculum ruminis DSM 2154 10739396 YP_004546484.1 CDS Desru_2985 NC_015589.1 3048103 3048348 D KEGG: drm:Dred_1120 hypothetical protein; hypothetical protein 3048103..3048348 Desulfotomaculum ruminis DSM 2154 10739397 YP_004546485.1 CDS Desru_2986 NC_015589.1 3048425 3048583 R hypothetical protein complement(3048425..3048583) Desulfotomaculum ruminis DSM 2154 10739398 YP_004546486.1 CDS Desru_2987 NC_015589.1 3048826 3049050 D PFAM: protein of unknown function DUF1657; KEGG: mta:Moth_1787 hypothetical protein; hypothetical protein 3048826..3049050 Desulfotomaculum ruminis DSM 2154 10739399 YP_004546487.1 CDS Desru_2988 NC_015589.1 3049369 3050427 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tpd:Teth39_0218 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3049369..3050427) Desulfotomaculum ruminis DSM 2154 10739400 YP_004546488.1 CDS Desru_2989 NC_015589.1 3050895 3051536 R KEGG: sth:STH3096 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; response regulator receiver complement(3050895..3051536) Desulfotomaculum ruminis DSM 2154 10739401 YP_004546489.1 CDS Desru_2990 NC_015589.1 3051538 3053532 R KEGG: tro:trd_A0570 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; ATP-binding protein complement(3051538..3053532) Desulfotomaculum ruminis DSM 2154 10739402 YP_004546490.1 CDS Desru_2991 NC_015589.1 3053504 3054718 R PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2276 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(3053504..3054718) Desulfotomaculum ruminis DSM 2154 10739403 YP_004546491.1 CDS Desru_2992 NC_015589.1 3055227 3055784 R KEGG: drm:Dred_0322 Fis family transcriptional regulator; Fis family transcriptional regulator complement(3055227..3055784) Desulfotomaculum ruminis DSM 2154 10739404 YP_004546492.1 CDS Desru_2993 NC_015589.1 3056370 3057431 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: bbe:BBR47_12660 hypothetical protein; copper amine oxidase-like domain-containing protein complement(3056370..3057431) Desulfotomaculum ruminis DSM 2154 10739405 YP_004546493.1 CDS Desru_2994 NC_015589.1 3061241 3061504 R TIGRFAM: CRISPR-associated protein Cas2; KEGG: pth:PTH_1913 hypothetical protein; CRISPR-associated protein Cas2 complement(3061241..3061504) Desulfotomaculum ruminis DSM 2154 10739406 YP_004546494.1 CDS Desru_2995 NC_015589.1 3061547 3062539 R KEGG: pth:PTH_1914 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 complement(3061547..3062539) Desulfotomaculum ruminis DSM 2154 10739407 YP_004546495.1 CDS Desru_2996 NC_015589.1 3062560 3063066 R TIGRFAM: CRISPR-associated protein Cas4; KEGG: pth:PTH_1915 endonuclease; CRISPR-associated protein Cas4 complement(3062560..3063066) Desulfotomaculum ruminis DSM 2154 10739408 YP_004546496.1 CDS Desru_2997 NC_015589.1 3063199 3065574 R TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: drm:Dred_0539 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase ; helicase domain protein; CRISPR-associated HD domain-containing protein complement(3063199..3065574) Desulfotomaculum ruminis DSM 2154 10739409 YP_004546497.1 CDS Desru_2998 NC_015589.1 3065571 3066299 R TIGRFAM: CRISPR-associated protein Cas5; KEGG: drm:Dred_0538 CRISPR-associated Cas5 family Hmari subtype protein; CRISPR-associated protein Cas5 complement(3065571..3066299) Desulfotomaculum ruminis DSM 2154 10739410 YP_004546498.1 CDS Desru_2999 NC_015589.1 3066296 3067273 R KEGG: drm:Dred_0537 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; CRISPR-associated protein Csh2 family complement(3066296..3067273) Desulfotomaculum ruminis DSM 2154 10739411 YP_004546499.1 CDS Desru_3000 NC_015589.1 3067288 3069309 R PFAM: CRISPR-associated protein TM1802; KEGG: drm:Dred_0536 hypothetical protein; CRISPR-associated protein TM1802 complement(3067288..3069309) Desulfotomaculum ruminis DSM 2154 10739412 YP_004546500.1 CDS Desru_3001 NC_015589.1 3069325 3070077 R KEGG: tjr:TherJR_2497 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; CRISPR-associated protein Cas6 complement(3069325..3070077) Desulfotomaculum ruminis DSM 2154 10739413 YP_004546501.1 CDS Desru_3002 NC_015589.1 3070271 3071848 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: drm:Dred_1855 molybdopterin oxidoreductase; molybdopterin oxidoreductase complement(3070271..3071848) Desulfotomaculum ruminis DSM 2154 10739414 YP_004546502.1 CDS Desru_3003 NC_015589.1 3071897 3072952 R PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: pth:PTH_2646 formate dehydrogenase; NADH:ubiquinone oxidoreductase subunit G iron-sulfur binding protein complement(3071897..3072952) Desulfotomaculum ruminis DSM 2154 10739415 YP_004546503.1 CDS Desru_3004 NC_015589.1 3072966 3074918 R KEGG: hmo:HM1_1744 proton-translocating NADH-ubiquinone oxidoreductase, chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) complement(3072966..3074918) Desulfotomaculum ruminis DSM 2154 10739416 YP_004546504.1 CDS Desru_3005 NC_015589.1 3074934 3075419 R PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tjr:TherJR_0740 NADH-quinone oxidoreductase, E subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit complement(3074934..3075419) Desulfotomaculum ruminis DSM 2154 10739417 YP_004546505.1 CDS Desru_3006 NC_015589.1 3075560 3076384 R KEGG: drm:Dred_1118 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC complement(3075560..3076384) Desulfotomaculum ruminis DSM 2154 10739418 YP_004546506.1 CDS Desru_3007 NC_015589.1 3076423 3077238 R PFAM: formate dehydrogenase accessory protein; KEGG: drm:Dred_1117 hypothetical protein; formate dehydrogenase accessory protein complement(3076423..3077238) Desulfotomaculum ruminis DSM 2154 10739419 YP_004546507.1 CDS Desru_3008 NC_015589.1 3077275 3078426 R PFAM: Polysulphide reductase NrfD; KEGG: drm:Dred_1116 polysulphide reductase, NrfD; polysulfide reductase NrfD complement(3077275..3078426) Desulfotomaculum ruminis DSM 2154 10739420 YP_004546508.1 CDS Desru_3009 NC_015589.1 3078474 3079283 R KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(3078474..3079283) Desulfotomaculum ruminis DSM 2154 10739421 YP_004546509.1 CDS Desru_3010 NC_015589.1 3079284 3081740 R KEGG: drm:Dred_1114 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; nitrate reductase complement(3079284..3081740) Desulfotomaculum ruminis DSM 2154 10739422 YP_004546510.1 CDS Desru_3011 NC_015589.1 3081789 3082403 R PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: drm:Dred_1113 formate dehydrogenase; molybdopterin oxidoreductase Fe4S4 region complement(3081789..3082403) Desulfotomaculum ruminis DSM 2154 10739423 YP_004546511.1 CDS Desru_3013 NC_015589.1 3083135 3083734 D KEGG: drm:Dred_1111 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3083135..3083734 Desulfotomaculum ruminis DSM 2154 10739425 YP_004546512.1 CDS Desru_3014 NC_015589.1 3083947 3085470 R PFAM: GerA spore germination protein; KEGG: drm:Dred_1110 GerA spore germination protein; GerA spore germination protein complement(3083947..3085470) Desulfotomaculum ruminis DSM 2154 10739426 YP_004546513.1 CDS Desru_3015 NC_015589.1 3085442 3086026 R KEGG: drm:Dred_1109 stage V sporulation protein AE, C-terminal region; stage V sporulation protein AE C-terminal region complement(3085442..3086026) Desulfotomaculum ruminis DSM 2154 10739427 YP_004546514.1 CDS Desru_3016 NC_015589.1 3086036 3086389 R KEGG: drm:Dred_1108 SpoVA protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; stage V sporulation protein AE complement(3086036..3086389) Desulfotomaculum ruminis DSM 2154 10739428 YP_004546515.1 CDS Desru_3017 NC_015589.1 3086403 3087416 R manually curated; TIGRFAM: stage V sporulation protein AD; KEGG: drm:Dred_1107 stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; stage V sporulation protein AD complement(3086403..3087416) Desulfotomaculum ruminis DSM 2154 10739429 YP_004546516.1 CDS Desru_3018 NC_015589.1 3087432 3087899 R KEGG: drm:Dred_1106 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; stage V sporulation protein AC complement(3087432..3087899) Desulfotomaculum ruminis DSM 2154 10739430 YP_004546517.1 CDS Desru_3019 NC_015589.1 3087998 3088780 R KEGG: drm:Dred_1105 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-F factor complement(3087998..3088780) Desulfotomaculum ruminis DSM 2154 10739431 YP_004546518.1 CDS Desru_3020 NC_015589.1 3088797 3089243 R SMART: ATP-binding region ATPase domain protein; TIGRFAM: anti-sigma F factor; KEGG: drm:Dred_1104 anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein; anti-sigma F factor complement(3088797..3089243) Desulfotomaculum ruminis DSM 2154 10739432 YP_004546519.1 CDS Desru_3021 NC_015589.1 3089257 3089595 R KEGG: drm:Dred_1103 anti-sigma-factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma F factor antagonist complement(3089257..3089595) Desulfotomaculum ruminis DSM 2154 10739433 YP_004546520.1 CDS Desru_3022 NC_015589.1 3089729 3090976 R KEGG: drm:Dred_1102 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase complement(3089729..3090976) Desulfotomaculum ruminis DSM 2154 10739434 YP_004546521.1 CDS Desru_3023 NC_015589.1 3093234 3093872 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein complement(3093234..3093872) Desulfotomaculum ruminis DSM 2154 10739435 YP_004546522.1 CDS Desru_3025 NC_015589.1 3095383 3095811 D KEGG: dae:Dtox_2795 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 3095383..3095811 Desulfotomaculum ruminis DSM 2154 10739437 YP_004546523.1 CDS Desru_3026 NC_015589.1 3095997 3096281 D KEGG: lbf:LBF_2798 TPR repeat-containing lipoprotein; hypothetical protein 3095997..3096281 Desulfotomaculum ruminis DSM 2154 10739438 YP_004546524.1 CDS Desru_3027 NC_015589.1 3096355 3097524 D PFAM: major facilitator superfamily MFS_1; KEGG: dae:Dtox_3789 major facilitator superfamily MFS_1; major facilitator superfamily protein 3096355..3097524 Desulfotomaculum ruminis DSM 2154 10739439 YP_004546525.1 CDS Desru_3028 NC_015589.1 3097692 3098066 D KEGG: fma:FMG_0380 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; regulatory protein GntR 3097692..3098066 Desulfotomaculum ruminis DSM 2154 10739440 YP_004546526.1 CDS Desru_3029 NC_015589.1 3098079 3099461 D KEGG: eel:EUBELI_01889 hypothetical protein; hypothetical protein 3098079..3099461 Desulfotomaculum ruminis DSM 2154 10739441 YP_004546527.1 CDS Desru_3030 NC_015589.1 3102103 3103431 R TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: drm:Dred_1101 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; pyrimidine-nucleoside phosphorylase complement(3102103..3103431) Desulfotomaculum ruminis DSM 2154 10739442 YP_004546528.1 CDS Desru_3031 NC_015589.1 3103458 3104639 R TIGRFAM: phosphopentomutase; KEGG: drm:Dred_1100 phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase complement(3103458..3104639) Desulfotomaculum ruminis DSM 2154 10739443 YP_004546529.1 CDS Desru_3032 NC_015589.1 3104672 3105562 R KEGG: drm:Dred_1099 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerD complement(3104672..3105562) Desulfotomaculum ruminis DSM 2154 10739444 YP_004546530.1 CDS Desru_3033 NC_015589.1 3105696 3105959 R KEGG: drm:Dred_1098 hypothetical protein; hypothetical protein complement(3105696..3105959) Desulfotomaculum ruminis DSM 2154 10739445 YP_004546531.1 CDS Desru_3034 NC_015589.1 3106112 3106348 D hypothetical protein 3106112..3106348 Desulfotomaculum ruminis DSM 2154 10739446 YP_004546532.1 CDS Desru_3035 NC_015589.1 3106451 3106906 D PFAM: protein of unknown function DUF441; KEGG: drm:Dred_1097 hypothetical protein; hypothetical protein 3106451..3106906 Desulfotomaculum ruminis DSM 2154 10739447 YP_004546533.1 CDS Desru_3036 NC_015589.1 3106947 3107243 R PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_1096 small acid-soluble spore protein, alpha/beta type; small acid-soluble spore protein alpha/beta type complement(3106947..3107243) Desulfotomaculum ruminis DSM 2154 10739448 YP_004546534.1 CDS Desru_3037 NC_015589.1 3107359 3107937 R KEGG: drm:Dred_1095 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; stage II sporulation protein M complement(3107359..3107937) Desulfotomaculum ruminis DSM 2154 10739449 YP_004546535.1 CDS Desru_3038 NC_015589.1 3108143 3108595 D KEGG: cbf:CLI_1113 hypothetical protein; hypothetical protein 3108143..3108595 Desulfotomaculum ruminis DSM 2154 10739450 YP_004546536.1 CDS Desru_3039 NC_015589.1 3108742 3109419 R KEGG: drm:Dred_1094 hypothetical protein; hypothetical protein complement(3108742..3109419) Desulfotomaculum ruminis DSM 2154 10739451 YP_004546537.1 CDS Desru_3040 NC_015589.1 3109506 3109664 D KEGG: dae:Dtox_2048 hypothetical protein; hypothetical protein 3109506..3109664 Desulfotomaculum ruminis DSM 2154 10739452 YP_004546538.1 CDS Desru_3041 NC_015589.1 3109666 3110754 R KEGG: drm:Dred_1093 hypothetical protein; hypothetical protein complement(3109666..3110754) Desulfotomaculum ruminis DSM 2154 10739453 YP_004546539.1 CDS Desru_3042 NC_015589.1 3110826 3111005 R KEGG: mfa:Mfla_2316 cyclic nucleotide-binding domain-containing protein; cyclic nucleotide-binding domain-containing protein complement(3110826..3111005) Desulfotomaculum ruminis DSM 2154 10739454 YP_004546540.1 CDS Desru_3043 NC_015589.1 3111075 3111269 R KEGG: bpf:BpOF4_16635 hypothetical protein; hypothetical protein complement(3111075..3111269) Desulfotomaculum ruminis DSM 2154 10739455 YP_004546541.1 CDS Desru_3044 NC_015589.1 3111276 3112403 R KEGG: drm:Dred_1092 peptidase T-like protein; TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase T-like protein complement(3111276..3112403) Desulfotomaculum ruminis DSM 2154 10739456 YP_004546542.1 CDS Desru_3045 NC_015589.1 3112513 3113061 R KEGG: tjr:TherJR_1676 pyruvate/ketoisovalerate oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; pyruvate/ketoisovalerate oxidoreductase subunit gamma complement(3112513..3113061) Desulfotomaculum ruminis DSM 2154 10739457 YP_004546543.1 CDS Desru_3046 NC_015589.1 3113062 3113811 R PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: hor:Hore_06790 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit; thiamine pyrophosphate TPP-binding domain-containing protein complement(3113062..3113811) Desulfotomaculum ruminis DSM 2154 10739458 YP_004546544.1 CDS Desru_3047 NC_015589.1 3113811 3114878 R KEGG: adg:Adeg_1385 2-ketoisovalerate ferredoxin reductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 3-methyl-2-oxobutanoate dehydrogenase complement(3113811..3114878) Desulfotomaculum ruminis DSM 2154 10739459 YP_004546545.1 CDS Desru_3048 NC_015589.1 3114875 3115093 R KEGG: pth:PTH_1204 ferredoxin; ferredoxin complement(3114875..3115093) Desulfotomaculum ruminis DSM 2154 10739460 YP_004546546.1 CDS Desru_3049 NC_015589.1 3115156 3115851 R KEGG: dau:Daud_1610 hypothetical protein; hypothetical protein complement(3115156..3115851) Desulfotomaculum ruminis DSM 2154 10739461 YP_004546547.1 CDS Desru_3050 NC_015589.1 3115951 3116787 R KEGG: drm:Dred_1091 hypothetical protein; hypothetical protein complement(3115951..3116787) Desulfotomaculum ruminis DSM 2154 10739462 YP_004546548.1 CDS Desru_3051 NC_015589.1 3116862 3117548 R PFAM: glycosyl transferase family 2; KEGG: drm:Dred_1090 glycosyl transferase family protein; family 2 glycosyl transferase complement(3116862..3117548) Desulfotomaculum ruminis DSM 2154 10739463 YP_004546549.1 CDS Desru_3052 NC_015589.1 3117520 3118452 R KEGG: drm:Dred_1089 hypothetical protein; hypothetical protein complement(3117520..3118452) Desulfotomaculum ruminis DSM 2154 10739464 YP_004546550.1 CDS Desru_3053 NC_015589.1 3118465 3119586 R PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; KEGG: drm:Dred_1088 thiamin pyrophosphokinase, catalytic region; thiamin pyrophosphokinase catalytic domain-containing protein complement(3118465..3119586) Desulfotomaculum ruminis DSM 2154 10739465 YP_004546551.1 CDS Desru_3054 NC_015589.1 3119992 3120186 D KEGG: rno:450224 oligodendrocyte-myelin glycoprotein; hypothetical protein 3119992..3120186 Desulfotomaculum ruminis DSM 2154 10739466 YP_004546552.1 CDS Desru_3055 NC_015589.1 3120252 3120707 R KEGG: tye:THEYE_A1155 NrfD; hypothetical protein complement(3120252..3120707) Desulfotomaculum ruminis DSM 2154 10739467 YP_004546553.1 CDS Desru_3056 NC_015589.1 3120682 3121140 R KEGG: ant:Arnit_0953 TRAP dicarboxylate transporter subunit DctM; hypothetical protein complement(3120682..3121140) Desulfotomaculum ruminis DSM 2154 10739468 YP_004546554.1 CDS Desru_3057 NC_015589.1 3121121 3121330 R KEGG: fbc:FB2170_04760 hypothetical protein; hypothetical protein complement(3121121..3121330) Desulfotomaculum ruminis DSM 2154 10739469 YP_004546555.1 CDS Desru_3058 NC_015589.1 3121482 3122675 R KEGG: dae:Dtox_2743 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(3121482..3122675) Desulfotomaculum ruminis DSM 2154 10739470 YP_004546556.1 CDS Desru_3059 NC_015589.1 3123014 3123523 D PFAM: protein of unknown function DUF1003; KEGG: aac:Aaci_2194 protein of unknown function DUF1003; hypothetical protein 3123014..3123523 Desulfotomaculum ruminis DSM 2154 10739471 YP_004546557.1 CDS Desru_3060 NC_015589.1 3123575 3124345 R TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; KEGG: drm:Dred_1086 response regulator receiver protein; SMART: response regulator receiver; sporulation transcription factor Spo0A complement(3123575..3124345) Desulfotomaculum ruminis DSM 2154 10739472 YP_004546558.1 CDS Desru_3061 NC_015589.1 3124534 3125871 R TIGRFAM: stage IV sporulation protein B; KEGG: drm:Dred_1085 peptidase S55, SpoIVB; PFAM: peptidase S55 SpoIVB; stage IV sporulation protein B complement(3124534..3125871) Desulfotomaculum ruminis DSM 2154 10739473 YP_004546559.1 CDS Desru_3062 NC_015589.1 3126170 3127864 R KEGG: drm:Dred_1084 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN complement(3126170..3127864) Desulfotomaculum ruminis DSM 2154 10739474 YP_004546560.1 CDS Desru_3063 NC_015589.1 3127870 3128328 R KEGG: drm:Dred_1083 arginine repressor, ArgR; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like; arginine repressor complement(3127870..3128328) Desulfotomaculum ruminis DSM 2154 10739475 YP_004546561.1 CDS Desru_3064 NC_015589.1 3128306 3128908 R PFAM: rRNA methylase; KEGG: drm:Dred_1082 putative rRNA methylase; rRNA methylase complement(3128306..3128908) Desulfotomaculum ruminis DSM 2154 10739476 YP_004546562.1 CDS Desru_3065 NC_015589.1 3128895 3129761 R PFAM: ATP-NAD/AcoX kinase; KEGG: drm:Dred_1081 NAD(+) kinase; ATP-NAD/AcoX kinase complement(3128895..3129761) Desulfotomaculum ruminis DSM 2154 10739477 YP_004546563.1 CDS Desru_3066 NC_015589.1 3129758 3130285 R KEGG: drm:Dred_1080 hypothetical protein; hypothetical protein complement(3129758..3130285) Desulfotomaculum ruminis DSM 2154 10739478 YP_004546564.1 CDS Desru_3067 NC_015589.1 3130499 3131377 R TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: drm:Dred_1079 hemolysin A; SMART: RNA-binding S4 domain protein; hemolysin A complement(3130499..3131377) Desulfotomaculum ruminis DSM 2154 10739479 YP_004546565.1 CDS Desru_3068 NC_015589.1 3131407 3133317 R KEGG: drm:Dred_1078 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; deoxyxylulose-5-phosphate synthase complement(3131407..3133317) Desulfotomaculum ruminis DSM 2154 10739480 YP_004546566.1 CDS Desru_3069 NC_015589.1 3133333 3133914 R KEGG: drm:Dred_1077 hypothetical protein; hypothetical protein complement(3133333..3133914) Desulfotomaculum ruminis DSM 2154 10739481 YP_004546567.1 CDS Desru_3070 NC_015589.1 3134693 3135583 R PFAM: Polyprenyl synthetase; KEGG: drm:Dred_1076 polyprenyl synthetase; polyprenyl synthetase complement(3134693..3135583) Desulfotomaculum ruminis DSM 2154 10739482 YP_004546568.1 CDS Desru_3071 NC_015589.1 3135580 3135819 R KEGG: drm:Dred_1075 exodeoxyribonuclease VII, small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(3135580..3135819) Desulfotomaculum ruminis DSM 2154 10739483 YP_004546569.1 CDS Desru_3072 NC_015589.1 3135835 3136467 R PFAM: Formiminotransferase-cyclodeaminase; KEGG: drm:Dred_1074 formiminotransferase-cyclodeaminase; formiminotransferase-cyclodeaminase complement(3135835..3136467) Desulfotomaculum ruminis DSM 2154 10739484 YP_004546570.1 CDS Desru_3073 NC_015589.1 3136461 3137339 R KEGG: drm:Dred_1073 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase complement(3136461..3137339) Desulfotomaculum ruminis DSM 2154 10739485 YP_004546571.1 CDS Desru_3074 NC_015589.1 3137377 3138573 R KEGG: drm:Dred_1072 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit complement(3137377..3138573) Desulfotomaculum ruminis DSM 2154 10739486 YP_004546572.1 CDS Desru_3075 NC_015589.1 3138925 3140331 R manually curated; TIGRFAM: glutamate synthase (NADPH), homotetrameric; KEGG: drm:Dred_1071 putative oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH) homotetrameric complement(3138925..3140331) Desulfotomaculum ruminis DSM 2154 10739487 YP_004546573.1 CDS Desru_3076 NC_015589.1 3140324 3141175 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: drm:Dred_1070 ferredoxin-NADP(+) reductase subunit alpha; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(3140324..3141175) Desulfotomaculum ruminis DSM 2154 10739488 YP_004546574.1 CDS Desru_3077 NC_015589.1 3141211 3141654 R KEGG: drm:Dred_1069 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; transcription antitermination factor NusB complement(3141211..3141654) Desulfotomaculum ruminis DSM 2154 10739489 YP_004546575.1 CDS Desru_3078 NC_015589.1 3141733 3141954 R PFAM: Protein of unknown function DUF2273; KEGG: drm:Dred_1068 hypothetical protein; hypothetical protein complement(3141733..3141954) Desulfotomaculum ruminis DSM 2154 10739490 YP_004546576.1 CDS Desru_3079 NC_015589.1 3141978 3142514 R PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1067 hypothetical protein; hypothetical protein complement(3141978..3142514) Desulfotomaculum ruminis DSM 2154 10739491 YP_004546577.1 CDS Desru_3080 NC_015589.1 3142635 3143045 R PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1066 hypothetical protein; hypothetical protein complement(3142635..3143045) Desulfotomaculum ruminis DSM 2154 10739492 YP_004546578.1 CDS Desru_3081 NC_015589.1 3143120 3144469 R KEGG: drm:Dred_1065 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase biotin carboxylase complement(3143120..3144469) Desulfotomaculum ruminis DSM 2154 10739493 YP_004546579.1 CDS Desru_3082 NC_015589.1 3144479 3146377 R KEGG: drm:Dred_1064 pyruvate carboxylase subunit B; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase biotin carboxyl carrier protein complement(3144479..3146377) Desulfotomaculum ruminis DSM 2154 10739494 YP_004546580.1 CDS Desru_3083 NC_015589.1 3146648 3147295 R KEGG: drm:Dred_1063 hypothetical protein; hypothetical protein complement(3146648..3147295) Desulfotomaculum ruminis DSM 2154 10739495 YP_004546581.1 CDS Desru_3084 NC_015589.1 3147299 3147934 R KEGG: drm:Dred_1062 hypothetical protein; hypothetical protein complement(3147299..3147934) Desulfotomaculum ruminis DSM 2154 10739496 YP_004546582.1 CDS Desru_3085 NC_015589.1 3148141 3148785 R PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein; sporulation stage III protein AF complement(3148141..3148785) Desulfotomaculum ruminis DSM 2154 10739497 YP_004546583.1 CDS Desru_3086 NC_015589.1 3148803 3149966 R KEGG: drm:Dred_1060 hypothetical protein; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; stage III sporulation protein AE complement(3148803..3149966) Desulfotomaculum ruminis DSM 2154 10739498 YP_004546584.1 CDS Desru_3087 NC_015589.1 3149980 3150366 R TIGRFAM: stage III sporulation protein AD; KEGG: drm:Dred_1059 putative sporulation protein; stage III sporulation protein AD complement(3149980..3150366) Desulfotomaculum ruminis DSM 2154 10739499 YP_004546585.1 CDS Desru_3088 NC_015589.1 3150407 3150607 R TIGRFAM: stage III sporulation protein AC; KEGG: drm:Dred_1058 stage III sporulation AC family protein; stage III sporulation protein AC complement(3150407..3150607) Desulfotomaculum ruminis DSM 2154 10739500 YP_004546586.1 CDS Desru_3089 NC_015589.1 3150623 3151141 R KEGG: drm:Dred_1057 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB; stage III sporulation protein AB complement(3150623..3151141) Desulfotomaculum ruminis DSM 2154 10739501 YP_004546587.1 CDS Desru_3090 NC_015589.1 3151135 3152148 R KEGG: drm:Dred_1056 hypothetical protein; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; stage III sporulation protein AA complement(3151135..3152148) Desulfotomaculum ruminis DSM 2154 10739502 YP_004546588.1 CDS Desru_3091 NC_015589.1 3152307 3153929 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1055 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein complement(3152307..3153929) Desulfotomaculum ruminis DSM 2154 10739503 YP_004546589.1 CDS Desru_3092 NC_015589.1 3154157 3155845 R KEGG: drm:Dred_1054 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3154157..3155845) Desulfotomaculum ruminis DSM 2154 10739504 YP_004546590.1 CDS Desru_3093 NC_015589.1 3156014 3157027 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: dae:Dtox_0904 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3156014..3157027) Desulfotomaculum ruminis DSM 2154 10739505 YP_004546591.1 CDS Desru_3094 NC_015589.1 3157608 3158057 R KEGG: drm:Dred_1053 hypothetical protein; hypothetical protein complement(3157608..3158057) Desulfotomaculum ruminis DSM 2154 10739506 YP_004546592.1 CDS Desru_3095 NC_015589.1 3158146 3158703 R KEGG: drm:Dred_1052 translation elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; translation elongation factor P complement(3158146..3158703) Desulfotomaculum ruminis DSM 2154 10739507 YP_004546593.1 CDS Desru_3096 NC_015589.1 3158729 3159799 R PFAM: peptidase M24; creatinase; KEGG: drm:Dred_1051 peptidase M24; peptidase M24 complement(3158729..3159799) Desulfotomaculum ruminis DSM 2154 10739508 YP_004546594.1 CDS Desru_3097 NC_015589.1 3159796 3160245 R TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: drm:Dred_1050 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase complement(3159796..3160245) Desulfotomaculum ruminis DSM 2154 10739509 YP_004546595.1 CDS Desru_3098 NC_015589.1 3160410 3161759 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: drm:Dred_1049 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase complement(3160410..3161759) Desulfotomaculum ruminis DSM 2154 10739510 YP_004546596.1 CDS Desru_3099 NC_015589.1 3161868 3162080 R KEGG: drm:Dred_1048 hypothetical protein; hypothetical protein complement(3161868..3162080) Desulfotomaculum ruminis DSM 2154 10739511 YP_004546597.1 CDS Desru_3100 NC_015589.1 3162465 3163895 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: drm:Dred_1032 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase complement(3162465..3163895) Desulfotomaculum ruminis DSM 2154 10739512 YP_004546598.1 CDS Desru_3101 NC_015589.1 3164013 3164831 R KEGG: cdl:CDR20291_3346 putative type IV pilus assembly protein; hypothetical protein complement(3164013..3164831) Desulfotomaculum ruminis DSM 2154 10739513 YP_004546599.1 CDS Desru_3102 NC_015589.1 3164828 3165508 R PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein; fimbrial assembly family protein complement(3164828..3165508) Desulfotomaculum ruminis DSM 2154 10739514 YP_004546600.1 CDS Desru_3103 NC_015589.1 3165505 3166554 R TIGRFAM: type IV pilus assembly protein PilM; KEGG: dau:Daud_0998 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM complement(3165505..3166554) Desulfotomaculum ruminis DSM 2154 10739515 YP_004546601.1 CDS Desru_3104 NC_015589.1 3166573 3167049 R KEGG: dau:Daud_0994 N-terminal methylation protein; N-terminal methylation protein complement(3166573..3167049) Desulfotomaculum ruminis DSM 2154 10739516 YP_004546602.1 CDS Desru_3105 NC_015589.1 3167122 3168057 R KEGG: mta:Moth_1546 hypothetical protein; hypothetical protein complement(3167122..3168057) Desulfotomaculum ruminis DSM 2154 10739517 YP_004546603.1 CDS Desru_3106 NC_015589.1 3168059 3168658 R KEGG: toc:Toce_1924 hypothetical protein; hypothetical protein complement(3168059..3168658) Desulfotomaculum ruminis DSM 2154 10739518 YP_004546604.1 CDS Desru_3107 NC_015589.1 3168668 3169090 R KEGG: toc:Toce_1925 hypothetical protein; hypothetical protein complement(3168668..3169090) Desulfotomaculum ruminis DSM 2154 10739519 YP_004546605.1 CDS Desru_3108 NC_015589.1 3169131 3169721 R KEGG: toc:Toce_1927 N-terminal methylation; hypothetical protein complement(3169131..3169721) Desulfotomaculum ruminis DSM 2154 10739520 YP_004546606.1 CDS Desru_3109 NC_015589.1 3169767 3170282 R KEGG: toc:Toce_1927 N-terminal methylation; N-terminal methylation complement(3169767..3170282) Desulfotomaculum ruminis DSM 2154 10739521 YP_004546607.1 CDS Desru_3110 NC_015589.1 3170404 3171645 R PFAM: Type II secretion system F domain; KEGG: dau:Daud_0970 type II secretion system protein; type II secretion system F domain-containing protein complement(3170404..3171645) Desulfotomaculum ruminis DSM 2154 10739522 YP_004546608.1 CDS Desru_3111 NC_015589.1 3171858 3172952 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: adg:Adeg_1724 twitching motility protein; SMART: AAA ATPase; twitching motility protein complement(3171858..3172952) Desulfotomaculum ruminis DSM 2154 10739523 YP_004546609.1 CDS Desru_3112 NC_015589.1 3172949 3174661 R KEGG: dau:Daud_0991 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; type II secretion system protein E complement(3172949..3174661) Desulfotomaculum ruminis DSM 2154 10739524 YP_004546610.1 CDS Desru_3113 NC_015589.1 3174673 3175422 R KEGG: ttm:Tthe_1281 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; prepilin peptidase complement(3174673..3175422) Desulfotomaculum ruminis DSM 2154 10739525 YP_004546611.1 CDS Desru_3114 NC_015589.1 3175454 3176533 R TIGRFAM: 3-dehydroquinate synthase; KEGG: drm:Dred_1021 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(3175454..3176533) Desulfotomaculum ruminis DSM 2154 10739526 YP_004546612.1 CDS Desru_3115 NC_015589.1 3176530 3177048 R KEGG: drm:Dred_1020 shikimate kinase; PFAM: shikimate kinase; shikimate kinase complement(3176530..3177048) Desulfotomaculum ruminis DSM 2154 10739527 YP_004546613.1 CDS Desru_3116 NC_015589.1 3177052 3178215 R TIGRFAM: chorismate synthase; KEGG: drm:Dred_1019 chorismate synthase; PFAM: chorismate synthase; chorismate synthase complement(3177052..3178215) Desulfotomaculum ruminis DSM 2154 10739528 YP_004546614.1 CDS Desru_3117 NC_015589.1 3178221 3179102 R KEGG: drm:Dred_1018 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase complement(3178221..3179102) Desulfotomaculum ruminis DSM 2154 10739529 YP_004546615.1 CDS Desru_3118 NC_015589.1 3179154 3179696 R TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: drm:Dred_1017 HAD family phosphatase; HAD superfamily phosphatase complement(3179154..3179696) Desulfotomaculum ruminis DSM 2154 10739530 YP_004546616.1 CDS Desru_3119 NC_015589.1 3179878 3180585 D KEGG: dae:Dtox_2798 RNA polymerase, sigma 28 subunit, SigK; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-K factor 3179878..3180585 Desulfotomaculum ruminis DSM 2154 10739531 YP_004546617.1 CDS Desru_3120 NC_015589.1 3180662 3181000 R KEGG: pth:PTH_0798 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(3180662..3181000) Desulfotomaculum ruminis DSM 2154 10739532 YP_004546618.1 CDS Desru_3121 NC_015589.1 3181217 3181795 D KEGG: cpf:CPF_1811 GGDEF/HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein 3181217..3181795 Desulfotomaculum ruminis DSM 2154 10739533 YP_004546619.1 CDS Desru_3122 NC_015589.1 3182121 3182972 R TIGRFAM: diguanylate cyclase; PFAM: CBS domain containing protein; GGDEF domain containing protein; KEGG: drm:Dred_1016 diguanylate cyclase; SMART: GGDEF domain containing protein; CBS domain containing protein; diguanylate cyclase complement(3182121..3182972) Desulfotomaculum ruminis DSM 2154 10739534 YP_004546620.1 CDS Desru_3123 NC_015589.1 3182969 3183343 R KEGG: drm:Dred_1015 hypothetical protein; hypothetical protein complement(3182969..3183343) Desulfotomaculum ruminis DSM 2154 10739535 YP_004546621.1 CDS Desru_3124 NC_015589.1 3183783 3184244 R KEGG: dak:DaAHT2_0654 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver complement(3183783..3184244) Desulfotomaculum ruminis DSM 2154 10739536 YP_004546622.1 CDS Desru_3125 NC_015589.1 3184562 3187312 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; KEGG: dae:Dtox_0050 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein; histidine kinase A domain protein; PAS sensor protein complement(3184562..3187312) Desulfotomaculum ruminis DSM 2154 10739537 YP_004546623.1 CDS Desru_3126 NC_015589.1 3187522 3188769 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_35310 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3187522..3188769 Desulfotomaculum ruminis DSM 2154 10739538 YP_004546624.1 CDS Desru_3127 NC_015589.1 3188853 3189536 D KEGG: toc:Toce_1956 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3188853..3189536 Desulfotomaculum ruminis DSM 2154 10739539 YP_004546625.1 CDS Desru_3128 NC_015589.1 3189620 3190414 D PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region; integrase catalytic subunit 3189620..3190414 Desulfotomaculum ruminis DSM 2154 10739540 YP_004546626.1 CDS Desru_3129 NC_015589.1 3190630 3191187 R KEGG: rru:Rru_A1367 hexulose-6-phosphate isomerase; PFAM: sugar isomerase (SIS); 6-phospho 3-hexuloisomerase complement(3190630..3191187) Desulfotomaculum ruminis DSM 2154 10739541 YP_004546627.1 CDS Desru_3130 NC_015589.1 3191209 3192135 R PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: msv:Mesil_3059 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(3191209..3192135) Desulfotomaculum ruminis DSM 2154 10739542 YP_004546628.1 CDS Desru_3131 NC_015589.1 3192222 3193205 R PFAM: PfkB domain protein; KEGG: ppp:PHYPADRAFT_121587 hypothetical protein; PfkB domain-containing protein complement(3192222..3193205) Desulfotomaculum ruminis DSM 2154 10739543 YP_004546629.1 CDS Desru_3132 NC_015589.1 3193221 3194753 R KEGG: dtu:Dtur_0920 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; xylulokinase complement(3193221..3194753) Desulfotomaculum ruminis DSM 2154 10739544 YP_004546630.1 CDS Desru_3133 NC_015589.1 3194763 3195776 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bts:Btus_0337 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein complement(3194763..3195776) Desulfotomaculum ruminis DSM 2154 10739545 YP_004546631.1 CDS Desru_3134 NC_015589.1 3195790 3196830 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bss:BSUW23_03100 glucitol (sorbitol) dehydrogenase; alcohol dehydrogenase GroES domain-containing protein complement(3195790..3196830) Desulfotomaculum ruminis DSM 2154 10739546 YP_004546632.1 CDS Desru_3135 NC_015589.1 3196894 3197733 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2612 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3196894..3197733) Desulfotomaculum ruminis DSM 2154 10739547 YP_004546633.1 CDS Desru_3136 NC_015589.1 3197735 3198673 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2611 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3197735..3198673) Desulfotomaculum ruminis DSM 2154 10739548 YP_004546634.1 CDS Desru_3137 NC_015589.1 3198746 3200269 R PFAM: extracellular solute-binding protein family 1; KEGG: csa:Csal_2610 extracellular solute-binding protein; family 1 extracellular solute-binding protein complement(3198746..3200269) Desulfotomaculum ruminis DSM 2154 10739549 YP_004546635.1 CDS Desru_3138 NC_015589.1 3200294 3200392 R hypothetical protein complement(3200294..3200392) Desulfotomaculum ruminis DSM 2154 10739550 YP_004546636.1 CDS Desru_3139 NC_015589.1 3200418 3201518 R KEGG: ate:Athe_1803 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter-like protein complement(3200418..3201518) Desulfotomaculum ruminis DSM 2154 10739551 YP_004546637.1 CDS Desru_3140 NC_015589.1 3201506 3202468 R PFAM: PfkB domain protein; KEGG: toc:Toce_1876 PfkB domain protein; PfkB domain-containing protein complement(3201506..3202468) Desulfotomaculum ruminis DSM 2154 10739552 YP_004546638.1 CDS Desru_3141 NC_015589.1 3202485 3203258 R KEGG: mta:Moth_0011 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; regulatory protein DeoR complement(3202485..3203258) Desulfotomaculum ruminis DSM 2154 10739553 YP_004546639.1 CDS Desru_3142 NC_015589.1 3203339 3204202 R TIGRFAM: ketose-bisphosphate aldolase; KEGG: pam:PANA_2380 FbaA; PFAM: ketose-bisphosphate aldolase class-II; ketose-bisphosphate aldolase complement(3203339..3204202) Desulfotomaculum ruminis DSM 2154 10739554 YP_004546640.1 CDS Desru_3143 NC_015589.1 3204441 3205613 D KEGG: app:CAP2UW1_1735 beta-lactamase domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 3204441..3205613 Desulfotomaculum ruminis DSM 2154 10739555 YP_004546641.1 CDS Desru_3144 NC_015589.1 3205666 3205926 R KEGG: drm:Dred_0906 hypothetical protein; hypothetical protein complement(3205666..3205926) Desulfotomaculum ruminis DSM 2154 10739556 YP_004546642.1 CDS Desru_3145 NC_015589.1 3206031 3206822 R KEGG: drm:Dred_0905 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(3206031..3206822) Desulfotomaculum ruminis DSM 2154 10739557 YP_004546643.1 CDS Desru_3146 NC_015589.1 3206980 3207297 R KEGG: drm:Dred_0904 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin complement(3206980..3207297) Desulfotomaculum ruminis DSM 2154 10739558 YP_004546644.1 CDS Desru_3147 NC_015589.1 3207428 3208195 R KEGG: drm:Dred_0903 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(3207428..3208195) Desulfotomaculum ruminis DSM 2154 10739559 YP_004546645.1 CDS Desru_3148 NC_015589.1 3208255 3209955 R KEGG: drm:Dred_0902 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase complement(3208255..3209955) Desulfotomaculum ruminis DSM 2154 10739560 YP_004546646.1 CDS Desru_3149 NC_015589.1 3210027 3211247 R PFAM: peptidase U32; KEGG: drm:Dred_0901 peptidase U32; peptidase U32 complement(3210027..3211247) Desulfotomaculum ruminis DSM 2154 10739561 YP_004546647.1 CDS Desru_3150 NC_015589.1 3211293 3212318 R PFAM: aminodeoxychorismate lyase; KEGG: drm:Dred_0900 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(3211293..3212318) Desulfotomaculum ruminis DSM 2154 10739562 YP_004546648.1 CDS Desru_3151 NC_015589.1 3212435 3213178 R KEGG: drm:Dred_0899 hypothetical protein; hypothetical protein complement(3212435..3213178) Desulfotomaculum ruminis DSM 2154 10739563 YP_004546649.1 CDS Desru_3152 NC_015589.1 3213363 3214295 R KEGG: dhd:Dhaf_2806 hypothetical protein; hypothetical protein complement(3213363..3214295) Desulfotomaculum ruminis DSM 2154 10739564 YP_004546650.1 CDS Desru_3153 NC_015589.1 3214299 3214865 R KEGG: bbe:BBR47_46000 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 family RNA polymerase sigma factor complement(3214299..3214865) Desulfotomaculum ruminis DSM 2154 10739565 YP_004546651.1 CDS Desru_3154 NC_015589.1 3215064 3216482 R PFAM: VanW family protein; KEGG: drm:Dred_0777 VanW family protein; VanW family protein complement(3215064..3216482) Desulfotomaculum ruminis DSM 2154 10739566 YP_004546652.1 CDS Desru_3155 NC_015589.1 3216732 3217001 R PFAM: protein of unknown function DUF1292; KEGG: drm:Dred_0776 hypothetical protein; hypothetical protein complement(3216732..3217001) Desulfotomaculum ruminis DSM 2154 10739567 YP_004546653.1 CDS Desru_3156 NC_015589.1 3217102 3217518 R KEGG: drm:Dred_0775 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF complement(3217102..3217518) Desulfotomaculum ruminis DSM 2154 10739568 YP_004546654.1 CDS Desru_3157 NC_015589.1 3217686 3217943 R PFAM: protein of unknown function DUF965; KEGG: drm:Dred_0773 hypothetical protein; hypothetical protein complement(3217686..3217943) Desulfotomaculum ruminis DSM 2154 10739569 YP_004546655.1 CDS Desru_3158 NC_015589.1 3218083 3218811 D PFAM: protein of unknown function DUF421; KEGG: cce:Ccel_1122 protein of unknown function DUF421; hypothetical protein 3218083..3218811 Desulfotomaculum ruminis DSM 2154 10739570 YP_004546656.1 CDS Desru_3159 NC_015589.1 3218847 3219212 D KEGG: ctc:CTC00416 hypothetical protein; hypothetical protein 3218847..3219212 Desulfotomaculum ruminis DSM 2154 10739571 YP_004546657.1 CDS Desru_3160 NC_015589.1 3219299 3219694 R KEGG: drm:Dred_0772 hypothetical protein; hypothetical protein complement(3219299..3219694) Desulfotomaculum ruminis DSM 2154 10739572 YP_004546658.1 CDS Desru_3161 NC_015589.1 3219813 3222446 R KEGG: drm:Dred_0769 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; alanyl-tRNA synthetase complement(3219813..3222446) Desulfotomaculum ruminis DSM 2154 10739573 YP_004546659.1 CDS Desru_3162 NC_015589.1 3222774 3223805 R PFAM: protein of unknown function UPF0118; KEGG: drm:Dred_0768 hypothetical protein; hypothetical protein complement(3222774..3223805) Desulfotomaculum ruminis DSM 2154 10739574 YP_004546660.1 CDS Desru_3163 NC_015589.1 3223899 3224075 R KEGG: dae:Dtox_2269 hypothetical protein; hypothetical protein complement(3223899..3224075) Desulfotomaculum ruminis DSM 2154 10739575 YP_004546661.1 CDS Desru_3164 NC_015589.1 3224097 3224270 R KEGG: drm:Dred_0767 hypothetical protein; hypothetical protein complement(3224097..3224270) Desulfotomaculum ruminis DSM 2154 10739576 YP_004546662.1 CDS Desru_3165 NC_015589.1 3224471 3225160 D KEGG: drm:Dred_2741 phospholipase C zinc-binding protein; PFAM: phospholipase C zinc-binding protein; SMART: phospholipase C zinc-binding protein; phospholipase C zinc-binding protein 3224471..3225160 Desulfotomaculum ruminis DSM 2154 10739577 YP_004546663.1 CDS Desru_3166 NC_015589.1 3225183 3226319 D PFAM: glycosyl transferase group 1; KEGG: hor:Hore_11160 glycosyl transferase group 1; group 1 glycosyl transferase 3225183..3226319 Desulfotomaculum ruminis DSM 2154 10739578 YP_004546664.1 CDS Desru_3167 NC_015589.1 3226599 3226931 D KEGG: tet:TTHERM_01035720 hypothetical protein; hypothetical protein 3226599..3226931 Desulfotomaculum ruminis DSM 2154 10739579 YP_004546665.1 CDS Desru_3168 NC_015589.1 3227006 3227740 R KEGG: dae:Dtox_1950 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein complement(3227006..3227740) Desulfotomaculum ruminis DSM 2154 10739580 YP_004546666.1 CDS Desru_3169 NC_015589.1 3227966 3229078 R TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: drm:Dred_0766 tRNA-specific 2-thiouridylase MnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase complement(3227966..3229078) Desulfotomaculum ruminis DSM 2154 10739581 YP_004546667.1 CDS Desru_3170 NC_015589.1 3229087 3229461 R KEGG: drm:Dred_0765 NifU domain-containing protein; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; FeS cluster assembly scaffold protein NifU complement(3229087..3229461) Desulfotomaculum ruminis DSM 2154 10739582 YP_004546668.1 CDS Desru_3171 NC_015589.1 3229498 3230745 R KEGG: drm:Dred_0764 aminotransferase, class V; TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; cysteine desulfurase NifS complement(3229498..3230745) Desulfotomaculum ruminis DSM 2154 10739583 YP_004546669.1 CDS Desru_3172 NC_015589.1 3230789 3231232 R KEGG: drm:Dred_0763 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Rrf2 family transcriptional regulator complement(3230789..3231232) Desulfotomaculum ruminis DSM 2154 10739584 YP_004546670.1 CDS Desru_3173 NC_015589.1 3231458 3231784 R KEGG: drm:Dred_0762 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin complement(3231458..3231784) Desulfotomaculum ruminis DSM 2154 10739585 YP_004546671.1 CDS Desru_3174 NC_015589.1 3231890 3232612 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: drm:Dred_0761 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(3231890..3232612) Desulfotomaculum ruminis DSM 2154 10739586 YP_004546672.1 CDS Desru_3175 NC_015589.1 3232923 3234374 R KEGG: drm:Dred_0760 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein complement(3232923..3234374) Desulfotomaculum ruminis DSM 2154 10739587 YP_004546673.1 CDS Desru_3176 NC_015589.1 3234374 3235048 R KEGG: drm:Dred_0759 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(3234374..3235048) Desulfotomaculum ruminis DSM 2154 10739588 YP_004546674.1 CDS Desru_3177 NC_015589.1 3235078 3236199 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_0758 peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; HtrA2 peptidase complement(3235078..3236199) Desulfotomaculum ruminis DSM 2154 10739589 YP_004546675.1 CDS Desru_3178 NC_015589.1 3236624 3238432 R KEGG: drm:Dred_0757 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase complement(3236624..3238432) Desulfotomaculum ruminis DSM 2154 10739591 YP_004546676.1 CDS Desru_3179 NC_015589.1 3238456 3239718 R TIGRFAM: histidyl-tRNA synthetase; KEGG: drm:Dred_0756 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase complement(3238456..3239718) Desulfotomaculum ruminis DSM 2154 10739592 YP_004546677.1 CDS Desru_3180 NC_015589.1 3240192 3240521 D PFAM: protein of unknown function DUF896; KEGG: drm:Dred_0755 hypothetical protein; hypothetical protein 3240192..3240521 Desulfotomaculum ruminis DSM 2154 10739593 YP_004546678.1 CDS Desru_3181 NC_015589.1 3240543 3241268 D PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: drm:Dred_0754 hydrolase; haloacid dehalogenase domain-containing protein 3240543..3241268 Desulfotomaculum ruminis DSM 2154 10739594 YP_004546679.1 CDS Desru_3182 NC_015589.1 3241364 3242272 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: slp:Slip_0633 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(3241364..3242272) Desulfotomaculum ruminis DSM 2154 10739595 YP_004546680.1 CDS Desru_3183 NC_015589.1 3242288 3242905 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1686 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transport system inner membrane protein complement(3242288..3242905) Desulfotomaculum ruminis DSM 2154 10739596 YP_004546681.1 CDS Desru_3184 NC_015589.1 3242928 3243569 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1687 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transport system inner membrane protein complement(3242928..3243569) Desulfotomaculum ruminis DSM 2154 10739597 YP_004546682.1 CDS Desru_3185 NC_015589.1 3243566 3244687 R TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: mta:Moth_1688 glycine betaine/L-proline transport ATP binding subunit; SMART: AAA ATPase; CBS domain containing protein; glycine betaine/L-proline ABC transporter ATPase complement(3243566..3244687) Desulfotomaculum ruminis DSM 2154 10739598 YP_004546683.1 CDS Desru_3186 NC_015589.1 3245108 3245683 R PFAM: Methyltransferase type 11; KEGG: cbe:Cbei_3246 methyltransferase type 11; type 11 methyltransferase complement(3245108..3245683) Desulfotomaculum ruminis DSM 2154 10739599 YP_004546684.1 CDS Desru_3187 NC_015589.1 3246304 3246867 D KEGG: bbe:BBR47_46000 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 family RNA polymerase sigma factor 3246304..3246867 Desulfotomaculum ruminis DSM 2154 10739600 YP_004546685.1 CDS Desru_3188 NC_015589.1 3246872 3247777 D KEGG: clj:CLJU_c15710 hypothetical protein; hypothetical protein 3246872..3247777 Desulfotomaculum ruminis DSM 2154 10739601 YP_004546686.1 CDS Desru_3189 NC_015589.1 3247925 3248062 R KEGG: chy:CHY_2130 hypothetical protein; hypothetical protein complement(3247925..3248062) Desulfotomaculum ruminis DSM 2154 10739602 YP_004546687.1 CDS Desru_3190 NC_015589.1 3248227 3248430 R KEGG: cel:B0212.5 OSMotic avoidance abnormal family member (osm-9); osmotic avoidance abnormal family protein complement(3248227..3248430) Desulfotomaculum ruminis DSM 2154 10739603 YP_004546688.1 CDS Desru_3191 NC_015589.1 3248446 3248586 R KEGG: tte:TTE2362 hypothetical protein; hypothetical protein complement(3248446..3248586) Desulfotomaculum ruminis DSM 2154 10739604 YP_004546689.1 CDS Desru_3192 NC_015589.1 3248760 3249845 R KEGG: cbe:Cbei_5022 hypothetical protein; hypothetical protein complement(3248760..3249845) Desulfotomaculum ruminis DSM 2154 10739605 YP_004546690.1 CDS Desru_3193 NC_015589.1 3250148 3251389 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 3250148..3251389 Desulfotomaculum ruminis DSM 2154 10739606 YP_004546691.1 CDS Desru_3194 NC_015589.1 3252058 3252759 R KEGG: dra:DR_0987 DNA-binding response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; response regulator receiver complement(3252058..3252759) Desulfotomaculum ruminis DSM 2154 10739607 YP_004546692.1 CDS Desru_3195 NC_015589.1 3252789 3253496 R KEGG: deg:DehalGT_0593 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; ATP-binding protein complement(3252789..3253496) Desulfotomaculum ruminis DSM 2154 10739608 YP_004546693.1 CDS Desru_3196 NC_015589.1 3253592 3257032 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: toc:Toce_0243 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3253592..3257032) Desulfotomaculum ruminis DSM 2154 10739609 YP_004546694.1 CDS Desru_3199 NC_015589.1 3258856 3259413 R PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: nth:Nther_1247 NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit complement(3258856..3259413) Desulfotomaculum ruminis DSM 2154 10739611 YP_004546695.1 CDS Desru_3200 NC_015589.1 3259416 3259715 R KEGG: tsi:TSIB_1860 transcription regulator, Lrp/AsnC family; hypothetical protein complement(3259416..3259715) Desulfotomaculum ruminis DSM 2154 10739612 YP_004546696.1 CDS Desru_3201 NC_015589.1 3260259 3260414 R KEGG: drm:Dred_1356 ABC transporter related; hypothetical protein complement(3260259..3260414) Desulfotomaculum ruminis DSM 2154 10739613 YP_004546697.1 CDS Desru_3202 NC_015589.1 3260814 3261083 R KEGG: zro:ZYRO0C00220g hypothetical protein; hypothetical protein complement(3260814..3261083) Desulfotomaculum ruminis DSM 2154 10739614 YP_004546698.1 CDS Desru_3203 NC_015589.1 3262227 3263021 R KEGG: dhd:Dhaf_1254 hypothetical protein; hypothetical protein complement(3262227..3263021) Desulfotomaculum ruminis DSM 2154 10739615 YP_004546699.1 CDS Desru_3204 NC_015589.1 3263364 3263744 R KEGG: pyo:PY05559 hypothetical protein; hypothetical protein complement(3263364..3263744) Desulfotomaculum ruminis DSM 2154 10739616 YP_004546700.1 CDS Desru_3205 NC_015589.1 3264112 3264429 R KEGG: clj:CLJU_c26280 putative ABC transporter permease; hypothetical protein complement(3264112..3264429) Desulfotomaculum ruminis DSM 2154 10739617 YP_004546701.1 CDS Desru_3206 NC_015589.1 3264721 3265311 R PFAM: Protein of unknown function DUF2599; KEGG: bcq:BCQ_1310 hypothetical protein; hypothetical protein complement(3264721..3265311) Desulfotomaculum ruminis DSM 2154 10739618 YP_004546702.1 CDS Desru_3207 NC_015589.1 3265589 3266389 R KEGG: bwe:BcerKBAB4_5533 thioredoxin domain-containing protein; hypothetical protein complement(3265589..3266389) Desulfotomaculum ruminis DSM 2154 10739619 YP_004546703.1 CDS Desru_3208 NC_015589.1 3266917 3267213 R PFAM: LytTr DNA-binding region; KEGG: dsy:DSY2527 hypothetical protein; LytTr DNA-binding protein complement(3266917..3267213) Desulfotomaculum ruminis DSM 2154 10739620 YP_004546704.1 CDS Desru_3211 NC_015589.1 3269241 3270116 R KEGG: dsy:DSY4187 hypothetical protein; hypothetical protein complement(3269241..3270116) Desulfotomaculum ruminis DSM 2154 10739623 YP_004546705.1 CDS Desru_3212 NC_015589.1 3270490 3271026 R SMART: Rhodanese domain protein; KEGG: aco:Amico_0283 rhodanese domain protein; rhodanese domain-containing protein complement(3270490..3271026) Desulfotomaculum ruminis DSM 2154 10739624 YP_004546706.1 CDS Desru_3213 NC_015589.1 3271154 3272014 R KEGG: cdl:CDR20291_1075 hypothetical protein; hypothetical protein complement(3271154..3272014) Desulfotomaculum ruminis DSM 2154 10739625 YP_004546707.1 CDS Desru_3214 NC_015589.1 3272980 3274085 R KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(join(3272980..3273831,3273831..3274085)) Desulfotomaculum ruminis DSM 2154 10739626 YP_004546708.1 CDS Desru_3216 NC_015589.1 3275222 3275956 R KEGG: ttm:Tthe_0100 hypothetical protein; hypothetical protein complement(3275222..3275956) Desulfotomaculum ruminis DSM 2154 10739628 YP_004546709.1 CDS Desru_3217 NC_015589.1 3276198 3277303 D KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein join(3276198..3276452,3276452..3277303) Desulfotomaculum ruminis DSM 2154 10739629 YP_004546710.1 CDS Desru_3218 NC_015589.1 3277474 3277668 R KEGG: lch:Lcho_1754 large exoprotein involved in heme utilization or adhesion; hypothetical protein complement(3277474..3277668) Desulfotomaculum ruminis DSM 2154 10739630 YP_004546711.1 CDS Desru_3219 NC_015589.1 3278138 3278905 R KEGG: rno:308971 trinucleotide repeat containing 6a; hypothetical protein complement(3278138..3278905) Desulfotomaculum ruminis DSM 2154 10739631 YP_004546712.1 CDS Desru_3220 NC_015589.1 3279164 3279922 R KEGG: dae:Dtox_3200 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; response regulator receiver complement(3279164..3279922) Desulfotomaculum ruminis DSM 2154 10739632 YP_004546713.1 CDS Desru_3221 NC_015589.1 3279929 3280075 R KEGG: mta:Moth_1614 hypothetical protein; hypothetical protein complement(3279929..3280075) Desulfotomaculum ruminis DSM 2154 10739633 YP_004546714.1 CDS Desru_3222 NC_015589.1 3280080 3280715 R KEGG: dae:Dtox_3199 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; Accessory gene regulator B complement(3280080..3280715) Desulfotomaculum ruminis DSM 2154 10739634 YP_004546715.1 CDS Desru_3223 NC_015589.1 3280723 3282075 R KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; ATP-binding protein complement(3280723..3282075) Desulfotomaculum ruminis DSM 2154 10739635 YP_004546716.1 CDS Desru_3224 NC_015589.1 3282458 3283132 R PFAM: protein of unknown function DUF161; KEGG: ddr:Deide_05570 hypothetical protein; hypothetical protein complement(3282458..3283132) Desulfotomaculum ruminis DSM 2154 10739636 YP_004546717.1 CDS Desru_3225 NC_015589.1 3283198 3284091 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dsy:DSY3773 hypothetical protein; LysR substrate-binding protein complement(3283198..3284091) Desulfotomaculum ruminis DSM 2154 10739637 YP_004546718.1 CDS Desru_3226 NC_015589.1 3284258 3285478 D PFAM: protein of unknown function DUF401; KEGG: glo:Glov_0511 protein of unknown function DUF401; hypothetical protein 3284258..3285478 Desulfotomaculum ruminis DSM 2154 10739638 YP_004546719.1 CDS Desru_3227 NC_015589.1 3285757 3286428 D PFAM: protein of unknown function UPF0016; KEGG: sat:SYN_01349 hypothetical protein; hypothetical protein 3285757..3286428 Desulfotomaculum ruminis DSM 2154 10739639 YP_004546720.1 CDS Desru_3228 NC_015589.1 3286458 3287096 R KEGG: afw:Anae109_3495 hypothetical protein; hypothetical protein complement(3286458..3287096) Desulfotomaculum ruminis DSM 2154 10739640 YP_004546721.1 CDS Desru_3229 NC_015589.1 3287193 3288524 R PFAM: amino acid permease-associated region; KEGG: cbe:Cbei_4028 amino acid permease-associated region; amino acid permease-associated protein complement(3287193..3288524) Desulfotomaculum ruminis DSM 2154 10739641 YP_004546722.1 CDS Desru_3230 NC_015589.1 3288735 3289988 D PFAM: copper amine oxidase-like domain-containing protein; glycoside hydrolase family 18; KEGG: slp:Slip_1146 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 3288735..3289988 Desulfotomaculum ruminis DSM 2154 10739642 YP_004546723.1 CDS Desru_3231 NC_015589.1 3290082 3290261 R KEGG: pti:PHATRDRAFT_47702 hypothetical protein; hypothetical protein complement(3290082..3290261) Desulfotomaculum ruminis DSM 2154 10739643 YP_004546724.1 CDS Desru_3232 NC_015589.1 3290485 3291240 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dae:Dtox_2281 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3290485..3291240) Desulfotomaculum ruminis DSM 2154 10739644 YP_004546725.1 CDS Desru_3233 NC_015589.1 3291237 3292007 R KEGG: mta:Moth_0098 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3291237..3292007) Desulfotomaculum ruminis DSM 2154 10739645 YP_004546726.1 CDS Desru_3234 NC_015589.1 3292004 3292963 R SMART: extracellular solute-binding protein family 3; KEGG: adg:Adeg_0354 NMT1/THI5 like domain protein; family 3 extracellular solute-binding protein complement(3292004..3292963) Desulfotomaculum ruminis DSM 2154 10739646 YP_004546727.1 CDS Desru_3235 NC_015589.1 3293161 3293676 R KEGG: chy:CHY_0102 ferritin; PFAM: Ferritin Dps family protein; ferroxidase complement(3293161..3293676) Desulfotomaculum ruminis DSM 2154 10739647 YP_004546728.1 CDS Desru_3236 NC_015589.1 3293885 3294073 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dae:Dtox_1563 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(3293885..3294073) Desulfotomaculum ruminis DSM 2154 10739648 YP_004546729.1 CDS Desru_3237 NC_015589.1 3294189 3294995 R manually curated; PFAM: ABC transporter related; KEGG: bay:RBAM_031050 opuBA; SMART: AAA ATPase; ABC transporter-like protein complement(3294189..3294995) Desulfotomaculum ruminis DSM 2154 10739649 YP_004546730.1 CDS Desru_3238 NC_015589.1 3295029 3295955 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: str:Sterm_3032 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(3295029..3295955) Desulfotomaculum ruminis DSM 2154 10739650 YP_004546731.1 CDS Desru_3239 NC_015589.1 3295980 3296633 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0275 glycine betaine/L-proline ABC transporter (permease), putative; binding-protein-dependent transport system inner membrane protein complement(3295980..3296633) Desulfotomaculum ruminis DSM 2154 10739651 YP_004546732.1 CDS Desru_3240 NC_015589.1 3297021 3297944 R PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: hmo:HM1_0674 nad dependent epimerase/dehydratase family protein; hypothetical protein complement(3297021..3297944) Desulfotomaculum ruminis DSM 2154 10739652 YP_004546733.1 CDS Desru_3241 NC_015589.1 3298273 3298719 R PFAM: protein of unknown function DUF86; KEGG: pmo:Pmob_1311 hypothetical protein; hypothetical protein complement(3298273..3298719) Desulfotomaculum ruminis DSM 2154 10739653 YP_004546734.1 CDS Desru_3242 NC_015589.1 3298712 3299125 R PFAM: DNA polymerase beta domain protein region; KEGG: pth:PTH_0358 nucleotidyltransferase; DNA polymerase beta domain-containing protein complement(3298712..3299125) Desulfotomaculum ruminis DSM 2154 10739654 YP_004546735.1 CDS Desru_3243 NC_015589.1 3299285 3300097 R PFAM: protein of unknown function DUF610 YibQ; KEGG: drm:Dred_1577 protein of unknown function DUF610, YibQ; hypothetical protein complement(3299285..3300097) Desulfotomaculum ruminis DSM 2154 10739655 YP_004546736.1 CDS Desru_3244 NC_015589.1 3300112 3300816 R KEGG: drm:Dred_1578 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(3300112..3300816) Desulfotomaculum ruminis DSM 2154 10739656 YP_004546737.1 CDS Desru_3245 NC_015589.1 3301044 3301334 D PFAM: ABC transporter related; KEGG: dae:Dtox_2874 ABC transporter related; ABC transporter-like protein 3301044..3301334 Desulfotomaculum ruminis DSM 2154 10739657 YP_004546738.1 CDS Desru_3246 NC_015589.1 3301454 3302566 D KEGG: ckr:CKR_2503 hypothetical protein; hypothetical protein 3301454..3302566 Desulfotomaculum ruminis DSM 2154 10739658 YP_004546739.1 CDS Desru_3247 NC_015589.1 3302685 3303413 D KEGG: drm:Dred_1506 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3302685..3303413 Desulfotomaculum ruminis DSM 2154 10739659 YP_004546740.1 CDS Desru_3248 NC_015589.1 3303494 3304363 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_1505 hypothetical protein; hypothetical protein 3303494..3304363 Desulfotomaculum ruminis DSM 2154 10739660 YP_004546741.1 CDS Desru_3249 NC_015589.1 3304906 3305781 D KEGG: tmt:Tmath_0438 cobalamin biosynthesis protein CbiM; TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin biosynthesis protein CbiM 3304906..3305781 Desulfotomaculum ruminis DSM 2154 10739661 YP_004546742.1 CDS Desru_3250 NC_015589.1 3305765 3306088 D KEGG: lsp:Bsph_3450 cobalt ABC transporter permease; TIGRFAM: cobalt transport protein; PFAM: Cobalt transport protein CbiN; cobalt transport protein 3305765..3306088 Desulfotomaculum ruminis DSM 2154 10739662 YP_004546743.1 CDS Desru_3251 NC_015589.1 3306072 3306839 D KEGG: tmt:Tmath_0440 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane subunit CbiQ 3306072..3306839 Desulfotomaculum ruminis DSM 2154 10739663 YP_004546744.1 CDS Desru_3252 NC_015589.1 3306851 3307702 D TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: cno:NT01CX_1332 cobalt ABC transporter, ATP-binding protein; SMART: AAA ATPase; cobalt ABC transporter ATPase 3306851..3307702 Desulfotomaculum ruminis DSM 2154 10739664 YP_004546745.1 CDS Desru_3253 NC_015589.1 3307918 3308778 D PFAM: protein of unknown function DUF34; KEGG: cdf:CD0672 hypothetical protein; hypothetical protein 3307918..3308778 Desulfotomaculum ruminis DSM 2154 10739665 YP_004546746.1 CDS Desru_3254 NC_015589.1 3308920 3310242 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1644 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein complement(3308920..3310242) Desulfotomaculum ruminis DSM 2154 10739666 YP_004546747.1 CDS Desru_3255 NC_015589.1 3310387 3311019 R KEGG: toc:Toce_0259 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; HhH-GPD family protein complement(3310387..3311019) Desulfotomaculum ruminis DSM 2154 10739667 YP_004546748.1 CDS Desru_3256 NC_015589.1 3311244 3311729 D KEGG: hmo:HM1_1035 6-O-methylguanine DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3311244..3311729 Desulfotomaculum ruminis DSM 2154 10739668 YP_004546749.1 CDS Desru_3257 NC_015589.1 3311726 3312301 D KEGG: bcu:BCAH820_3221 transcriptional regulator, AraC family; PFAM: Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; Ada metal-binding domain-containing protein 3311726..3312301 Desulfotomaculum ruminis DSM 2154 10739669 YP_004546750.1 CDS Desru_3258 NC_015589.1 3312543 3313094 R KEGG: pap:PSPA7_4174 hypothetical protein; PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) complement(3312543..3313094) Desulfotomaculum ruminis DSM 2154 10739670 YP_004546751.1 CDS Desru_3259 NC_015589.1 3313408 3314211 D TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: hmo:HM1_1062 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase 3313408..3314211 Desulfotomaculum ruminis DSM 2154 10739671 YP_004546752.1 CDS Desru_3260 NC_015589.1 3314663 3316645 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dae:Dtox_0791 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone 3314663..3316645 Desulfotomaculum ruminis DSM 2154 10739672 YP_004546753.1 CDS Desru_3261 NC_015589.1 3316658 3317557 D KEGG: dae:Dtox_0792 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 3316658..3317557 Desulfotomaculum ruminis DSM 2154 10739673 YP_004546754.1 CDS Desru_3262 NC_015589.1 3317569 3318207 D KEGG: dae:Dtox_0793 hypothetical protein; hypothetical protein 3317569..3318207 Desulfotomaculum ruminis DSM 2154 10739674 YP_004546755.1 CDS Desru_3263 NC_015589.1 3318213 3319694 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dae:Dtox_0794 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone 3318213..3319694 Desulfotomaculum ruminis DSM 2154 10739675 YP_004546756.1 CDS Desru_3264 NC_015589.1 3319687 3321270 D PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dae:Dtox_0795 NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 3319687..3321270 Desulfotomaculum ruminis DSM 2154 10739676 YP_004546757.1 CDS Desru_3265 NC_015589.1 3321284 3321991 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dae:Dtox_0796 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 3321284..3321991 Desulfotomaculum ruminis DSM 2154 10739677 YP_004546758.1 CDS Desru_3266 NC_015589.1 3322091 3323074 R KEGG: amt:Amet_3205 lipoyltransferase and lipoate-protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: Lipoate protein ligase-like; biotin/lipoate A/B protein ligase; lipoyltransferase and lipoate-protein ligase complement(3322091..3323074) Desulfotomaculum ruminis DSM 2154 10739678 YP_004546759.1 CDS Desru_3267 NC_015589.1 3323145 3323333 R KEGG: mcd:MCRO_0555 probable 5'-3' exodeoxyribonuclease; hypothetical protein complement(3323145..3323333) Desulfotomaculum ruminis DSM 2154 10739679 YP_004546760.1 CDS Desru_3268 NC_015589.1 3323402 3324019 R KEGG: drm:Dred_0735 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein complement(3323402..3324019) Desulfotomaculum ruminis DSM 2154 10739680 YP_004546761.1 CDS Desru_3269 NC_015589.1 3324040 3324489 R KEGG: drm:Dred_0734 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(3324040..3324489) Desulfotomaculum ruminis DSM 2154 10739681 YP_004546762.1 CDS Desru_3270 NC_015589.1 3324661 3326832 R SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: drm:Dred_0733 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein; RelA/SpoT family protein complement(3324661..3326832) Desulfotomaculum ruminis DSM 2154 10739682 YP_004546763.1 CDS Desru_3271 NC_015589.1 3326859 3327377 R KEGG: drm:Dred_0732 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase complement(3326859..3327377) Desulfotomaculum ruminis DSM 2154 10739683 YP_004546764.1 CDS Desru_3272 NC_015589.1 3327397 3330054 R KEGG: drm:Dred_0731 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ complement(3327397..3330054) Desulfotomaculum ruminis DSM 2154 10739684 YP_004546765.1 CDS Desru_3273 NC_015589.1 3330279 3330554 D KEGG: drm:Dred_0730 hypothetical protein; hypothetical protein 3330279..3330554 Desulfotomaculum ruminis DSM 2154 10739685 YP_004546766.1 CDS Desru_3274 NC_015589.1 3330574 3331296 R KEGG: drm:Dred_0729 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3330574..3331296) Desulfotomaculum ruminis DSM 2154 10739686 YP_004546767.1 CDS Desru_3275 NC_015589.1 3331283 3331948 R KEGG: drm:Dred_0728 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(3331283..3331948) Desulfotomaculum ruminis DSM 2154 10739687 YP_004546768.1 CDS Desru_3276 NC_015589.1 3332048 3332857 R KEGG: drm:Dred_0727 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein complement(3332048..3332857) Desulfotomaculum ruminis DSM 2154 10739688 YP_004546769.1 CDS Desru_3277 NC_015589.1 3333110 3334003 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_0726 hypothetical protein; hypothetical protein 3333110..3334003 Desulfotomaculum ruminis DSM 2154 10739689 YP_004546770.1 CDS Desru_3278 NC_015589.1 3334193 3334567 D KEGG: drm:Dred_0725 hypothetical protein; hypothetical protein 3334193..3334567 Desulfotomaculum ruminis DSM 2154 10739690 YP_004546771.1 CDS Desru_3279 NC_015589.1 3334573 3335574 R KEGG: drm:Dred_0724 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(3334573..3335574) Desulfotomaculum ruminis DSM 2154 10739691 YP_004546772.1 CDS Desru_3280 NC_015589.1 3335820 3337274 R PFAM: Glycine cleavage system P-protein-like; KEGG: drm:Dred_0723 glycine dehydrogenase subunit 2; glycine cleavage system P-protein-like protein complement(3335820..3337274) Desulfotomaculum ruminis DSM 2154 10739692 YP_004546773.1 CDS Desru_3281 NC_015589.1 3337271 3338611 R KEGG: drm:Dred_0722 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein-like; glycine dehydrogenase complement(3337271..3338611) Desulfotomaculum ruminis DSM 2154 10739693 YP_004546774.1 CDS Desru_3282 NC_015589.1 3338613 3338999 R KEGG: drm:Dred_0721 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein complement(3338613..3338999) Desulfotomaculum ruminis DSM 2154 10739694 YP_004546775.1 CDS Desru_3283 NC_015589.1 3339003 3340097 R KEGG: drm:Dred_0720 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; glycine cleavage system T protein complement(3339003..3340097) Desulfotomaculum ruminis DSM 2154 10739695 YP_004546776.1 CDS Desru_3284 NC_015589.1 3341236 3341481 D KEGG: drm:Dred_0719 hypothetical protein; hypothetical protein 3341236..3341481 Desulfotomaculum ruminis DSM 2154 10739696 YP_004546777.1 CDS Desru_3285 NC_015589.1 3341540 3344335 R KEGG: drm:Dred_0718 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(3341540..3344335) Desulfotomaculum ruminis DSM 2154 10739697 YP_004546778.1 CDS Desru_3286 NC_015589.1 3344712 3345449 R KEGG: dae:Dtox_2167 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(3344712..3345449) Desulfotomaculum ruminis DSM 2154 10739698 YP_004546779.1 CDS Desru_3287 NC_015589.1 3345650 3346009 R SMART: Rhodanese domain protein; KEGG: lrl:LC705_02121 rhodanese-related sulfurtransferases; rhodanese domain-containing protein complement(3345650..3346009) Desulfotomaculum ruminis DSM 2154 10739699 YP_004546780.1 CDS Desru_3288 NC_015589.1 3346016 3346435 R KEGG: smc:SmuNN2025_0188 putative transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(3346016..3346435) Desulfotomaculum ruminis DSM 2154 10739700 YP_004546781.1 CDS Desru_3289 NC_015589.1 3346826 3349438 R KEGG: mba:Mbar_A1826 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; PBS lyase HEAT domain-containing protein complement(3346826..3349438) Desulfotomaculum ruminis DSM 2154 10739701 YP_004546782.1 CDS Desru_3290 NC_015589.1 3349655 3350368 R KEGG: dae:Dtox_1824 hypothetical protein; hypothetical protein complement(3349655..3350368) Desulfotomaculum ruminis DSM 2154 10739702 YP_004546783.1 CDS Desru_3291 NC_015589.1 3351078 3351878 R KEGG: mac:MA3472 hypothetical protein; hypothetical protein complement(3351078..3351878) Desulfotomaculum ruminis DSM 2154 10739703 YP_004546784.1 CDS Desru_3292 NC_015589.1 3352245 3353423 D KEGG: dae:Dtox_2730 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding protein 3352245..3353423 Desulfotomaculum ruminis DSM 2154 10739704 YP_004546785.1 CDS Desru_3293 NC_015589.1 3353420 3354106 D KEGG: dae:Dtox_2729 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver 3353420..3354106 Desulfotomaculum ruminis DSM 2154 10739705 YP_004546786.1 CDS Desru_3294 NC_015589.1 3354120 3354629 R PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi02771 hypothetical protein; N-acetyltransferase GCN5 complement(3354120..3354629) Desulfotomaculum ruminis DSM 2154 10739706 YP_004546787.1 CDS Desru_3295 NC_015589.1 3354707 3355549 R PFAM: VanW family protein; KEGG: dhd:Dhaf_1773 VanW family protein; VanW family protein complement(3354707..3355549) Desulfotomaculum ruminis DSM 2154 10739707 YP_004546788.1 CDS Desru_3296 NC_015589.1 3355587 3356729 R manually curated; KEGG: cpc:Cpar_1201 hypothetical protein; hypothetical protein complement(3355587..3356729) Desulfotomaculum ruminis DSM 2154 10739708 YP_004546789.1 CDS Desru_3297 NC_015589.1 3357013 3359649 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dae:Dtox_2649 pyruvate phosphate dikinase PEP/pyruvate-binding; pyruvate phosphate dikinase PEP/pyruvate-binding protein complement(3357013..3359649) Desulfotomaculum ruminis DSM 2154 10739709 YP_004546790.1 CDS Desru_3298 NC_015589.1 3359687 3360313 R PFAM: regulatory protein TetR; KEGG: dae:Dtox_2650 transcriptional regulator, TetR family; regulatory protein TetR complement(3359687..3360313) Desulfotomaculum ruminis DSM 2154 10739710 YP_004546791.1 CDS Desru_3299 NC_015589.1 3360574 3361458 R KEGG: gym:GYMC10_4413 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein complement(3360574..3361458) Desulfotomaculum ruminis DSM 2154 10739711 YP_004546792.1 CDS Desru_3301 NC_015589.1 3362472 3363071 R PFAM: Tetracycline transcriptional regulator QacR-related domain-containing protein; regulatory protein TetR; KEGG: bbe:BBR47_21860 probable transcriptional regulator; tetracycline transcriptional regulator QacR domain-containing protein complement(3362472..3363071) Desulfotomaculum ruminis DSM 2154 10739713 YP_004546793.1 CDS Desru_3302 NC_015589.1 3363300 3364061 D PFAM: Methyltransferase type 11; KEGG: nmg:Nmag_3332 methyltransferase type 11; type 11 methyltransferase 3363300..3364061 Desulfotomaculum ruminis DSM 2154 10739714 YP_004546794.1 CDS Desru_3303 NC_015589.1 3364113 3364400 R PFAM: protein of unknown function DUF167; KEGG: drm:Dred_0717 hypothetical protein; hypothetical protein complement(3364113..3364400) Desulfotomaculum ruminis DSM 2154 10739715 YP_004546795.1 CDS Desru_3304 NC_015589.1 3364465 3365004 R KEGG: drm:Dred_0716 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; DivIVA domain-containing protein complement(3364465..3365004) Desulfotomaculum ruminis DSM 2154 10739716 YP_004546796.1 CDS Desru_3305 NC_015589.1 3365224 3366012 R KEGG: drm:Dred_0715 RNA-binding S4 domain-containing protein; RNA-binding S4 domain-containing protein complement(3365224..3366012) Desulfotomaculum ruminis DSM 2154 10739717 YP_004546797.1 CDS Desru_3306 NC_015589.1 3366013 3366267 R PFAM: protein of unknown function YGGT; KEGG: drm:Dred_0714 protein of unknown function YGGT; hypothetical protein complement(3366013..3366267) Desulfotomaculum ruminis DSM 2154 10739718 YP_004546798.1 CDS Desru_3307 NC_015589.1 3366302 3366736 R PFAM: protein of unknown function DUF552; KEGG: drm:Dred_0713 hypothetical protein; hypothetical protein complement(3366302..3366736) Desulfotomaculum ruminis DSM 2154 10739719 YP_004546799.1 CDS Desru_3308 NC_015589.1 3366756 3367436 R PFAM: alanine racemase domain protein; KEGG: drm:Dred_0712 alanine racemase domain-containing protein; alanine racemase domain-containing protein complement(3366756..3367436) Desulfotomaculum ruminis DSM 2154 10739720 YP_004546800.1 CDS Desru_3309 NC_015589.1 3367449 3368447 R KEGG: drm:Dred_0711 hypothetical protein; hypothetical protein complement(3367449..3368447) Desulfotomaculum ruminis DSM 2154 10739721 YP_004546801.1 CDS Desru_3310 NC_015589.1 3368531 3369187 R KEGG: drm:Dred_0710 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate transport system regulatory protein PhoU complement(3368531..3369187) Desulfotomaculum ruminis DSM 2154 10739722 YP_004546802.1 CDS Desru_3311 NC_015589.1 3369247 3370002 R TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: drm:Dred_0709 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(3369247..3370002) Desulfotomaculum ruminis DSM 2154 10739723 YP_004546803.1 CDS Desru_3312 NC_015589.1 3370185 3371543 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; KEGG: drm:Dred_0708 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PAS sensor protein complement(3370185..3371543) Desulfotomaculum ruminis DSM 2154 10739724 YP_004546804.1 CDS Desru_3313 NC_015589.1 3371545 3372243 R KEGG: drm:Dred_0707 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(3371545..3372243) Desulfotomaculum ruminis DSM 2154 10739725 YP_004546805.1 CDS Desru_3314 NC_015589.1 3372244 3373083 R PFAM: protein of unknown function DUF152; KEGG: drm:Dred_0706 hypothetical protein; hypothetical protein complement(3372244..3373083) Desulfotomaculum ruminis DSM 2154 10739726 YP_004546806.1 CDS Desru_3315 NC_015589.1 3373102 3374682 R PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: drm:Dred_0705 beta-lactamase domain-containing protein; RNA-metabolising metallo-beta-lactamase complement(3373102..3374682) Desulfotomaculum ruminis DSM 2154 10739727 YP_004546807.1 CDS Desru_3316 NC_015589.1 3374878 3375102 D KEGG: adg:Adeg_1544 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein 3374878..3375102 Desulfotomaculum ruminis DSM 2154 10739728 YP_004546808.1 CDS Desru_3317 NC_015589.1 3375145 3376374 R KEGG: drm:Dred_0704 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein complement(3375145..3376374) Desulfotomaculum ruminis DSM 2154 10739729 YP_004546809.1 CDS Desru_3318 NC_015589.1 3376623 3377381 D PFAM: Methyltransferase type 11; KEGG: drm:Dred_0699 methyltransferase type 11; type 11 methyltransferase 3376623..3377381 Desulfotomaculum ruminis DSM 2154 10739730 YP_004546810.1 CDS Desru_3319 NC_015589.1 3377397 3378080 D KEGG: drm:Dred_0698 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; cyclic nucleotide-binding protein 3377397..3378080 Desulfotomaculum ruminis DSM 2154 10739731 YP_004546811.1 CDS Desru_3320 NC_015589.1 3378187 3380310 D TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: drm:Dred_0652 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; carbon-monoxide dehydrogenase catalytic subunit 3378187..3380310 Desulfotomaculum ruminis DSM 2154 10739732 YP_004546812.1 CDS Desru_3321 NC_015589.1 3380540 3381094 D PFAM: flavin reductase domain protein FMN-binding; KEGG: cbf:CLI_0920 putative flavoredoxin; flavin reductase domain-containing protein 3380540..3381094 Desulfotomaculum ruminis DSM 2154 10739733 YP_004546813.1 CDS Desru_3322 NC_015589.1 3381111 3381425 R PFAM: Carboxymuconolactone decarboxylase; KEGG: mpl:Mpal_0999 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(3381111..3381425) Desulfotomaculum ruminis DSM 2154 10739734 YP_004546814.1 CDS Desru_3323 NC_015589.1 3381495 3381752 R KEGG: dau:Daud_0161 hypothetical protein; hypothetical protein complement(3381495..3381752) Desulfotomaculum ruminis DSM 2154 10739735 YP_004546815.1 CDS Desru_3324 NC_015589.1 3381986 3382624 R PFAM: nitrite and sulphite reductase 4Fe-4S region; KEGG: drm:Dred_0697 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; nitrite and sulfite reductase 4Fe-4S region complement(3381986..3382624) Desulfotomaculum ruminis DSM 2154 10739736 YP_004546816.1 CDS Desru_3325 NC_015589.1 3382661 3382858 R PFAM: Domain of unknown function DUF1858; KEGG: drm:Dred_0695 hypothetical protein; hypothetical protein complement(3382661..3382858) Desulfotomaculum ruminis DSM 2154 10739737 YP_004546817.1 CDS Desru_3326 NC_015589.1 3383122 3383628 R KEGG: drm:Dred_0694 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(3383122..3383628) Desulfotomaculum ruminis DSM 2154 10739738 YP_004546818.1 CDS Desru_3327 NC_015589.1 3383645 3385675 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: drm:Dred_0693 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein; anaerobic ribonucleoside-triphosphate reductase complement(3383645..3385675) Desulfotomaculum ruminis DSM 2154 10739739 YP_004546819.1 CDS Desru_3328 NC_015589.1 3385692 3386153 R PFAM: ATP-cone domain protein; KEGG: drm:Dred_0692 transcriptional regulator NrdR; ATP-cone domain-containing protein complement(3385692..3386153) Desulfotomaculum ruminis DSM 2154 10739740 YP_004546820.1 CDS Desru_3329 NC_015589.1 3386460 3387518 D KEGG: drm:Dred_0691 spore photoproduct lyase; spore photoproduct lyase 3386460..3387518 Desulfotomaculum ruminis DSM 2154 10739741 YP_004546821.1 CDS Desru_3330 NC_015589.1 3387757 3389901 R PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_0690 hypothetical protein; hypothetical protein complement(3387757..3389901) Desulfotomaculum ruminis DSM 2154 10739742 YP_004546822.1 CDS Desru_3331 NC_015589.1 3389917 3390483 R PFAM: protein of unknown function DUF162; KEGG: drm:Dred_0689 hypothetical protein; hypothetical protein complement(3389917..3390483) Desulfotomaculum ruminis DSM 2154 10739743 YP_004546823.1 CDS Desru_3332 NC_015589.1 3390889 3391158 R KEGG: drm:Dred_0688 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; YlmC/YmxH family sporulation protein complement(3390889..3391158) Desulfotomaculum ruminis DSM 2154 10739744 YP_004546824.1 CDS Desru_3333 NC_015589.1 3391276 3392049 R KEGG: drm:Dred_0687 sporulation sigma factor SigG; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-G factor complement(3391276..3392049) Desulfotomaculum ruminis DSM 2154 10739745 YP_004546825.1 CDS Desru_3334 NC_015589.1 3392252 3392986 R KEGG: drm:Dred_0686 sporulation sigma factor SigE; TIGRFAM: RNA polymerase sigma-E factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-E factor complement(3392252..3392986) Desulfotomaculum ruminis DSM 2154 10739746 YP_004546826.1 CDS Desru_3335 NC_015589.1 3393023 3393925 R PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: drm:Dred_0685 peptidase U4, sporulation factor SpoIIGA; peptidase U4 sporulation factor SpoIIGA complement(3393023..3393925) Desulfotomaculum ruminis DSM 2154 10739747 YP_004546827.1 CDS Desru_3336 NC_015589.1 3394175 3394399 R KEGG: rca:Rcas_3311 hypothetical protein; hypothetical protein complement(3394175..3394399) Desulfotomaculum ruminis DSM 2154 10739748 YP_004546828.1 CDS Desru_3337 NC_015589.1 3394497 3394640 R hypothetical protein complement(3394497..3394640) Desulfotomaculum ruminis DSM 2154 10739749 YP_004546829.1 CDS Desru_3338 NC_015589.1 3394749 3395801 R KEGG: drm:Dred_0684 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ complement(3394749..3395801) Desulfotomaculum ruminis DSM 2154 10739750 YP_004546830.1 CDS Desru_3339 NC_015589.1 3395846 3396829 R PFAM: cell division protein FtsA; KEGG: drm:Dred_0683 cell division protein FtsA; cell division protein FtsA complement(3395846..3396829) Desulfotomaculum ruminis DSM 2154 10739751 YP_004546831.1 CDS Desru_3340 NC_015589.1 3396912 3397253 R PFAM: protein of unknown function DUF1290; KEGG: drm:Dred_0682 hypothetical protein; hypothetical protein complement(3396912..3397253) Desulfotomaculum ruminis DSM 2154 10739752 YP_004546832.1 CDS Desru_3341 NC_015589.1 3397256 3397960 R PFAM: protein of unknown function DUF881; KEGG: drm:Dred_0681 hypothetical protein; hypothetical protein complement(3397256..3397960) Desulfotomaculum ruminis DSM 2154 10739753 YP_004546833.1 CDS Desru_3342 NC_015589.1 3397957 3398670 R PFAM: protein of unknown function DUF881; KEGG: drm:Dred_0680 hypothetical protein; hypothetical protein complement(3397957..3398670) Desulfotomaculum ruminis DSM 2154 10739754 YP_004546834.1 CDS Desru_3343 NC_015589.1 3398667 3399422 R PFAM: Polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: drm:Dred_0679 cell division protein FtsQ; Polypeptide-transport-associated domain-containing protein FtsQ-type complement(3398667..3399422) Desulfotomaculum ruminis DSM 2154 10739755 YP_004546835.1 CDS Desru_3344 NC_015589.1 3399595 3400848 R KEGG: drm:Dred_0678 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3399595..3400848) Desulfotomaculum ruminis DSM 2154 10739756 YP_004546836.1 CDS Desru_3345 NC_015589.1 3400863 3401774 R TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: drm:Dred_0677 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3400863..3401774) Desulfotomaculum ruminis DSM 2154 10739757 YP_004546837.1 CDS Desru_3346 NC_015589.1 3401777 3403162 R KEGG: drm:Dred_0676 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramate--L-alanine ligase complement(3401777..3403162) Desulfotomaculum ruminis DSM 2154 10739758 YP_004546838.1 CDS Desru_3347 NC_015589.1 3403437 3404552 R KEGG: drm:Dred_0675 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(3403437..3404552) Desulfotomaculum ruminis DSM 2154 10739759 YP_004546839.1 CDS Desru_3348 NC_015589.1 3404607 3405710 R KEGG: drm:Dred_0674 stage V sporulation protein E; TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein; stage V sporulation protein E complement(3404607..3405710) Desulfotomaculum ruminis DSM 2154 10739760 YP_004546840.1 CDS Desru_3349 NC_015589.1 3405749 3407137 R KEGG: drm:Dred_0673 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(3405749..3407137) Desulfotomaculum ruminis DSM 2154 10739761 YP_004546841.1 CDS Desru_3350 NC_015589.1 3407210 3408214 R KEGG: drm:Dred_0672 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3407210..3408214) Desulfotomaculum ruminis DSM 2154 10739762 YP_004546842.1 CDS Desru_3351 NC_015589.1 3408245 3409633 R KEGG: drm:Dred_0671 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(3408245..3409633) Desulfotomaculum ruminis DSM 2154 10739763 YP_004546843.1 CDS Desru_3352 NC_015589.1 3409870 3411336 R KEGG: drm:Dred_0670 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase complement(3409870..3411336) Desulfotomaculum ruminis DSM 2154 10739764 YP_004546844.1 CDS Desru_3353 NC_015589.1 3411583 3413724 R SMART: PASTA domain containing protein; TIGRFAM: stage V sporulation protein D; KEGG: drm:Dred_0669 stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; stage V sporulation protein D complement(3411583..3413724) Desulfotomaculum ruminis DSM 2154 10739765 YP_004546845.1 CDS Desru_3354 NC_015589.1 3413765 3414304 R KEGG: drm:Dred_0668 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator; cell division protein FtsL complement(3413765..3414304) Desulfotomaculum ruminis DSM 2154 10739766 YP_004546846.1 CDS Desru_3355 NC_015589.1 3414360 3415301 R KEGG: drm:Dred_0667 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW complement(3414360..3415301) Desulfotomaculum ruminis DSM 2154 10739767 YP_004546847.1 CDS Desru_3356 NC_015589.1 3415460 3415888 R KEGG: drm:Dred_0666 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain; MraZ protein complement(3415460..3415888) Desulfotomaculum ruminis DSM 2154 10739768 YP_004546848.1 CDS Desru_3357 NC_015589.1 3416216 3417019 R KEGG: drm:Dred_0665 histidinol-phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; HisJ family histidinol phosphate phosphatase complement(3416216..3417019) Desulfotomaculum ruminis DSM 2154 10739769 YP_004546849.1 CDS Desru_3358 NC_015589.1 3417239 3418135 R PFAM: Patatin; KEGG: drm:Dred_0664 patatin; patatin complement(3417239..3418135) Desulfotomaculum ruminis DSM 2154 10739770 YP_004546850.1 CDS Desru_3359 NC_015589.1 3418208 3419788 R TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; KEGG: drm:Dred_0663 putative PAS/PAC sensor protein; SMART: AAA ATPase; PAS domain containing protein; PAS sensor protein complement(3418208..3419788) Desulfotomaculum ruminis DSM 2154 10739771 YP_004546851.1 CDS Desru_3360 NC_015589.1 3419924 3421630 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: drm:Dred_0651 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase complement(3419924..3421630) Desulfotomaculum ruminis DSM 2154 10739772 YP_004546852.1 CDS Desru_3361 NC_015589.1 3421807 3422244 R PFAM: ferric-uptake regulator; KEGG: drm:Dred_0650 ferric uptake regulator family protein; ferric-uptake regulator complement(3421807..3422244) Desulfotomaculum ruminis DSM 2154 10739773 YP_004546853.1 CDS Desru_3362 NC_015589.1 3422308 3423540 R KEGG: drm:Dred_0649 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase complement(3422308..3423540) Desulfotomaculum ruminis DSM 2154 10739774 YP_004546854.1 CDS Desru_3363 NC_015589.1 3423564 3425504 R KEGG: drm:Dred_0648 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; small GTP-binding protein complement(3423564..3425504) Desulfotomaculum ruminis DSM 2154 10739775 YP_004546855.1 CDS Desru_3364 NC_015589.1 3425630 3425848 R PFAM: FeoA family protein; KEGG: drm:Dred_0647 FeoA family protein; FeoA family protein complement(3425630..3425848) Desulfotomaculum ruminis DSM 2154 10739776 YP_004546856.1 CDS Desru_3365 NC_015589.1 3426027 3426173 D KEGG: dae:Dtox_1004 hypothetical protein; hypothetical protein 3426027..3426173 Desulfotomaculum ruminis DSM 2154 10739777 YP_004546857.1 CDS Desru_3366 NC_015589.1 3426218 3427267 R KEGG: drm:Dred_0646 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II; glycoside hydrolase family protein complement(3426218..3427267) Desulfotomaculum ruminis DSM 2154 10739778 YP_004546858.1 CDS Desru_3367 NC_015589.1 3427499 3427948 D PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: drm:Dred_0645 acid phosphatase/vanadium-dependent haloperoxidase related; acid phosphatase/vanadium-dependent haloperoxidase-like protein 3427499..3427948 Desulfotomaculum ruminis DSM 2154 10739779 YP_004546859.1 CDS Desru_3368 NC_015589.1 3427962 3429143 D PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_0644 major facilitator transporter; major facilitator superfamily protein 3427962..3429143 Desulfotomaculum ruminis DSM 2154 10739780 YP_004546860.1 CDS Desru_3369 NC_015589.1 3429149 3430486 D PFAM: polysaccharide deacetylase; KEGG: drm:Dred_0643 polysaccharide deacetylase; polysaccharide deacetylase 3429149..3430486 Desulfotomaculum ruminis DSM 2154 10739781 YP_004546861.1 CDS Desru_3370 NC_015589.1 3430419 3431666 R PFAM: Protein of unknown function DUF2088; KEGG: dae:Dtox_0989 hypothetical protein; hypothetical protein complement(3430419..3431666) Desulfotomaculum ruminis DSM 2154 10739782 YP_004546862.1 CDS Desru_3371 NC_015589.1 3431945 3433084 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_0641 peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; HtrA2 peptidase complement(3431945..3433084) Desulfotomaculum ruminis DSM 2154 10739783 YP_004546863.1 CDS Desru_3372 NC_015589.1 3433218 3434336 R KEGG: drm:Dred_0640 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein complement(3433218..3434336) Desulfotomaculum ruminis DSM 2154 10739784 YP_004546864.1 CDS Desru_3374 NC_015589.1 3435267 3437453 R PFAM: methyl-viologen-reducing hydrogenase delta subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_0639 methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase subunit delta complement(3435267..3437453) Desulfotomaculum ruminis DSM 2154 10739786 YP_004546865.1 CDS Desru_3375 NC_015589.1 3437458 3438705 R PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_0638 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; FAD dependent oxidoreductase complement(3437458..3438705) Desulfotomaculum ruminis DSM 2154 10739787 YP_004546866.1 CDS Desru_3376 NC_015589.1 3438949 3440823 R KEGG: drm:Dred_0637 adenylylsulfate reductase subunit alpha; TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: FAD dependent oxidoreductase; adenylylsulfate reductase subunit alpha complement(3438949..3440823) Desulfotomaculum ruminis DSM 2154 10739788 YP_004546867.1 CDS Desru_3377 NC_015589.1 3440861 3441304 R TIGRFAM: adenylylsulfate reductase, beta subunit; KEGG: drm:Dred_0636 adenylylsulfate reductase, beta subunit; adenylylsulfate reductase subunit beta complement(3440861..3441304) Desulfotomaculum ruminis DSM 2154 10739789 YP_004546868.1 CDS Desru_3378 NC_015589.1 3441735 3442904 R TIGRFAM: sulfate adenylyltransferase; KEGG: drm:Dred_0635 sulfate adenylyltransferase; PFAM: ATP-sulfurylase; sulfate adenylyltransferase complement(3441735..3442904) Desulfotomaculum ruminis DSM 2154 10739790 YP_004546869.1 CDS Desru_3379 NC_015589.1 3443315 3444184 R KEGG: drm:Dred_0634 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; CoB--CoM heterodisulfide reductase complement(3443315..3444184) Desulfotomaculum ruminis DSM 2154 10739791 YP_004546870.1 CDS Desru_3380 NC_015589.1 3444186 3444785 R KEGG: drm:Dred_0633 putative heterodisulfide reductase, C subunit; putative heterodisulfide reductase subunit C complement(3444186..3444785) Desulfotomaculum ruminis DSM 2154 10739792 YP_004546871.1 CDS Desru_3381 NC_015589.1 3445421 3446158 D PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_0632 hypothetical protein; hypothetical protein 3445421..3446158 Desulfotomaculum ruminis DSM 2154 10739793 YP_004546872.1 CDS Desru_3382 NC_015589.1 3446441 3446827 D KEGG: drm:Dred_0631 hypothetical protein; hypothetical protein 3446441..3446827 Desulfotomaculum ruminis DSM 2154 10739794 YP_004546873.1 CDS Desru_3383 NC_015589.1 3446925 3447629 R KEGG: drm:Dred_0630 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(3446925..3447629) Desulfotomaculum ruminis DSM 2154 10739795 YP_004546874.1 CDS Desru_3384 NC_015589.1 3447907 3448080 D KEGG: cma:Cmaq_0326 paREP15, putative coiled-coil protein; paREP15 coiled-coil protein 3447907..3448080 Desulfotomaculum ruminis DSM 2154 10739796 YP_004546875.1 CDS Desru_3385 NC_015589.1 3448267 3448884 D PFAM: type IV pilus assembly PilZ; KEGG: drm:Dred_0629 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3448267..3448884 Desulfotomaculum ruminis DSM 2154 10739797 YP_004546876.1 CDS Desru_3386 NC_015589.1 3449067 3450488 R PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_0599 major facilitator transporter; major facilitator superfamily protein complement(3449067..3450488) Desulfotomaculum ruminis DSM 2154 10739798 YP_004546877.1 CDS Desru_3387 NC_015589.1 3450783 3451109 R KEGG: drm:Dred_1805 hypothetical protein; hypothetical protein complement(3450783..3451109) Desulfotomaculum ruminis DSM 2154 10739799 YP_004546878.1 CDS Desru_3388 NC_015589.1 3451235 3452221 R PFAM: peptidase U32; KEGG: dhd:Dhaf_0684 peptidase U32; peptidase U32 complement(3451235..3452221) Desulfotomaculum ruminis DSM 2154 10739800 YP_004546879.1 CDS Desru_3389 NC_015589.1 3452236 3453138 R KEGG: dsy:DSY0724 hypothetical protein; hypothetical protein complement(3452236..3453138) Desulfotomaculum ruminis DSM 2154 10739801 YP_004546880.1 CDS Desru_3390 NC_015589.1 3453452 3453745 D KEGG: hya:HY04AAS1_0081 protein of unknown function DUF558; hypothetical protein 3453452..3453745 Desulfotomaculum ruminis DSM 2154 10739802 YP_004546881.1 CDS Desru_3391 NC_015589.1 3453762 3454685 R KEGG: mta:Moth_2293 hypothetical protein; hypothetical protein complement(3453762..3454685) Desulfotomaculum ruminis DSM 2154 10739803 YP_004546882.1 CDS Desru_3392 NC_015589.1 3454686 3455651 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bba:Bd2190 oligopeptide ABC transporter, ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3454686..3455651) Desulfotomaculum ruminis DSM 2154 10739804 YP_004546883.1 CDS Desru_3393 NC_015589.1 3455654 3456634 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: rci:LRC380 putative ABC-type peptide transport system, ATPase component 1; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3455654..3456634) Desulfotomaculum ruminis DSM 2154 10739805 YP_004546884.1 CDS Desru_3394 NC_015589.1 3456651 3457496 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6673 ATP-dependent peptide transporter membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3456651..3457496) Desulfotomaculum ruminis DSM 2154 10739806 YP_004546885.1 CDS Desru_3395 NC_015589.1 3457500 3458516 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dba:Dbac_2921 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3457500..3458516) Desulfotomaculum ruminis DSM 2154 10739807 YP_004546886.1 CDS Desru_3396 NC_015589.1 3458581 3460152 R PFAM: extracellular solute-binding protein family 5; KEGG: bts:Btus_2779 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(3458581..3460152) Desulfotomaculum ruminis DSM 2154 10739808 YP_004546887.1 CDS Desru_3397 NC_015589.1 3460199 3460771 R KEGG: nth:Nther_2571 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; cupin complement(3460199..3460771) Desulfotomaculum ruminis DSM 2154 10739809 YP_004546888.1 CDS Desru_3398 NC_015589.1 3461079 3462119 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dae:Dtox_0338 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(3461079..3462119) Desulfotomaculum ruminis DSM 2154 10739810 YP_004546889.1 CDS Desru_3399 NC_015589.1 3462146 3463150 R PFAM: periplasmic solute binding protein; KEGG: drm:Dred_2645 periplasmic solute binding protein; periplasmic solute binding protein complement(3462146..3463150) Desulfotomaculum ruminis DSM 2154 10739811 YP_004546890.1 CDS Desru_3400 NC_015589.1 3463521 3463724 D KEGG: lsa:LSA1851 extracellular small protein precursor; extracellular small protein 3463521..3463724 Desulfotomaculum ruminis DSM 2154 10739812 YP_004546891.1 CDS Desru_3401 NC_015589.1 3463841 3465220 R KEGG: mta:Moth_1763 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase complement(3463841..3465220) Desulfotomaculum ruminis DSM 2154 10739813 YP_004546892.1 CDS Desru_3402 NC_015589.1 3465248 3466474 R KEGG: dsy:DSY4927 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(3465248..3466474) Desulfotomaculum ruminis DSM 2154 10739814 YP_004546893.1 CDS Desru_3403 NC_015589.1 3467099 3469225 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; Cache domain protein; histidine kinase A domain protein; KEGG: drm:Dred_1269 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein; PAS sensor protein complement(3467099..3469225) Desulfotomaculum ruminis DSM 2154 10739815 YP_004546894.1 CDS Desru_3404 NC_015589.1 3469746 3469922 R KEGG: dae:Dtox_4335 hypothetical protein; hypothetical protein complement(3469746..3469922) Desulfotomaculum ruminis DSM 2154 10739816 YP_004546895.1 CDS Desru_3405 NC_015589.1 3470442 3470564 R hypothetical protein complement(3470442..3470564) Desulfotomaculum ruminis DSM 2154 10739820 YP_004546896.1 CDS Desru_3406 NC_015589.1 3470742 3471332 D KEGG: drm:Dred_0492 hypothetical protein; hypothetical protein 3470742..3471332 Desulfotomaculum ruminis DSM 2154 10739821 YP_004546897.1 CDS Desru_3407 NC_015589.1 3471722 3472297 R TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: drm:Dred_0491 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut complement(3471722..3472297) Desulfotomaculum ruminis DSM 2154 10739825 YP_004546898.1 CDS Desru_3408 NC_015589.1 3473205 3474038 R KEGG: drm:Dred_0488 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase complement(3473205..3474038) Desulfotomaculum ruminis DSM 2154 10739830 YP_004546899.1 CDS Desru_3410 NC_015589.1 3474599 3475078 D KEGG: drm:Dred_0486 hypothetical protein; hypothetical protein 3474599..3475078 Desulfotomaculum ruminis DSM 2154 10739832 YP_004546900.1 CDS Desru_3411 NC_015589.1 3475114 3475974 R KEGG: drm:Dred_0485 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2; xylose isomerase domain-containing protein complement(3475114..3475974) Desulfotomaculum ruminis DSM 2154 10739833 YP_004546901.1 CDS Desru_3412 NC_015589.1 3476092 3477675 D PFAM: extracellular solute-binding protein family 5; KEGG: drm:Dred_0484 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3476092..3477675 Desulfotomaculum ruminis DSM 2154 10739834 YP_004546902.1 CDS Desru_3413 NC_015589.1 3477808 3478569 D KEGG: drm:Dred_0482 hypothetical protein; hypothetical protein 3477808..3478569 Desulfotomaculum ruminis DSM 2154 10739835 YP_004546903.1 CDS Desru_3414 NC_015589.1 3478754 3478993 D KEGG: drm:Dred_0481 hypothetical protein; hypothetical protein 3478754..3478993 Desulfotomaculum ruminis DSM 2154 10739836 YP_004546904.1 CDS Desru_3415 NC_015589.1 3479302 3480444 R KEGG: drm:Dred_0480 hypothetical protein; hypothetical protein complement(3479302..3480444) Desulfotomaculum ruminis DSM 2154 10739837 YP_004546905.1 CDS Desru_3416 NC_015589.1 3480668 3480961 D KEGG: drm:Dred_0479 hypothetical protein; hypothetical protein 3480668..3480961 Desulfotomaculum ruminis DSM 2154 10739838 YP_004546906.1 CDS Desru_3417 NC_015589.1 3481046 3481552 D KEGG: drm:Dred_0478 anhydrase family 3 protein; anhydrase family 3 protein 3481046..3481552 Desulfotomaculum ruminis DSM 2154 10739839 YP_004546907.1 CDS Desru_3418 NC_015589.1 3481585 3481875 R KEGG: drm:Dred_0477 hypothetical protein; hypothetical protein complement(3481585..3481875) Desulfotomaculum ruminis DSM 2154 10739840 YP_004546908.1 CDS Desru_3419 NC_015589.1 3482027 3482983 R KEGG: drm:Dred_0475 hypothetical protein; hypothetical protein complement(3482027..3482983) Desulfotomaculum ruminis DSM 2154 10739841 YP_004546909.1 CDS Desru_3420 NC_015589.1 3483204 3484259 R TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2; KEGG: drm:Dred_0474 isopentenyl pyrophosphate isomerase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; isopentenyl-diphosphate delta-isomerase type 2 complement(3483204..3484259) Desulfotomaculum ruminis DSM 2154 10739842 YP_004546910.1 CDS Desru_3421 NC_015589.1 3484474 3486303 R KEGG: drm:Dred_0472 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein TypA complement(3484474..3486303) Desulfotomaculum ruminis DSM 2154 10739843 YP_004546911.1 CDS Desru_3422 NC_015589.1 3486520 3486702 R hypothetical protein complement(3486520..3486702) Desulfotomaculum ruminis DSM 2154 10739844 YP_004546912.1 CDS Desru_3423 NC_015589.1 3486794 3487144 R KEGG: drm:Dred_0470 hypothetical protein; hypothetical protein complement(3486794..3487144) Desulfotomaculum ruminis DSM 2154 10739845 YP_004546913.1 CDS Desru_3424 NC_015589.1 3487183 3487392 R KEGG: hya:HY04AAS1_1261 hypothetical protein; hypothetical protein complement(3487183..3487392) Desulfotomaculum ruminis DSM 2154 10739846 YP_004546914.1 CDS Desru_3425 NC_015589.1 3487389 3487583 R KEGG: ptm:GSPATT00013167001 hypothetical protein; hypothetical protein complement(3487389..3487583) Desulfotomaculum ruminis DSM 2154 10739847 YP_004546915.1 CDS Desru_3426 NC_015589.1 3487714 3488055 D PFAM: membrane protein of unknown function; KEGG: drm:Dred_0469 membrane protein of unknown function; hypothetical protein 3487714..3488055 Desulfotomaculum ruminis DSM 2154 10739848 YP_004546916.1 CDS Desru_3427 NC_015589.1 3488370 3488633 D PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_0468 small acid-soluble spore protein, alpha/beta type; small acid-soluble spore protein alpha/beta type 3488370..3488633 Desulfotomaculum ruminis DSM 2154 10739849 YP_004546917.1 CDS Desru_3428 NC_015589.1 3488935 3489168 D PFAM: protein of unknown function DUF1232; KEGG: drm:Dred_0465 hypothetical protein; hypothetical protein 3488935..3489168 Desulfotomaculum ruminis DSM 2154 10739850 YP_004546918.1 CDS Desru_3429 NC_015589.1 3489292 3489513 R KEGG: dae:Dtox_2079 hypothetical protein; hypothetical protein complement(3489292..3489513) Desulfotomaculum ruminis DSM 2154 10739851 YP_004546919.1 CDS Desru_3430 NC_015589.1 3489562 3490158 R KEGG: drm:Dred_0464 hypothetical protein; hypothetical protein complement(3489562..3490158) Desulfotomaculum ruminis DSM 2154 10739852 YP_004546920.1 CDS Desru_3431 NC_015589.1 3490971 3492530 D TIGRFAM: hydrogenase, Fe-only; KEGG: drm:Dred_0463 hydrogenases, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; hydrogenase Fe-only 3490971..3492530 Desulfotomaculum ruminis DSM 2154 10739853 YP_004546921.1 CDS Desru_3432 NC_015589.1 3492558 3493343 D KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 3492558..3493343 Desulfotomaculum ruminis DSM 2154 10739854 YP_004546922.1 CDS Desru_3433 NC_015589.1 3493381 3494523 D KEGG: drm:Dred_0461 putative hydrogenase cytochrome b subunit; putative hydrogenase cytochrome b subunit 3493381..3494523 Desulfotomaculum ruminis DSM 2154 10739855 YP_004546923.1 CDS Desru_3434 NC_015589.1 3495036 3496184 R PFAM: histidine kinase HAMP region domain protein; KEGG: tjr:TherJR_1822 putative sensor with HAMP domain protein; histidine kinase HAMP region domain-containing protein complement(3495036..3496184) Desulfotomaculum ruminis DSM 2154 10739856 YP_004546924.1 CDS Desru_3435 NC_015589.1 3496381 3496662 R KEGG: drm:Dred_0459 hypothetical protein; hypothetical protein complement(3496381..3496662) Desulfotomaculum ruminis DSM 2154 10739857 YP_004546925.1 CDS Desru_3436 NC_015589.1 3496694 3496915 R KEGG: gct:GC56T3_0187 sulfatase; hypothetical protein complement(3496694..3496915) Desulfotomaculum ruminis DSM 2154 10739858 YP_004546926.1 CDS Desru_3437 NC_015589.1 3497164 3497742 R KEGG: drm:Dred_0458 pro-sigma-E processing factor spoIIR; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R; stage II sporulation protein R complement(3497164..3497742) Desulfotomaculum ruminis DSM 2154 10739859 YP_004546927.1 CDS Desru_3438 NC_015589.1 3497903 3498268 R KEGG: drm:Dred_0456 hypothetical protein; hypothetical protein complement(3497903..3498268) Desulfotomaculum ruminis DSM 2154 10739860 YP_004546928.1 CDS Desru_3439 NC_015589.1 3498288 3498536 R hypothetical protein complement(3498288..3498536) Desulfotomaculum ruminis DSM 2154 10739861 YP_004546929.1 CDS Desru_3440 NC_015589.1 3498561 3498734 R KEGG: dae:Dtox_3524 hypothetical protein; hypothetical protein complement(3498561..3498734) Desulfotomaculum ruminis DSM 2154 10739862 YP_004546930.1 CDS Desru_3441 NC_015589.1 3498997 3499299 D KEGG: dae:Dtox_1812 hypothetical protein; hypothetical protein 3498997..3499299 Desulfotomaculum ruminis DSM 2154 10739863 YP_004546931.1 CDS Desru_3442 NC_015589.1 3499411 3499734 R KEGG: cby:CLM_2428 CobQ/CobB/MinD/ParA family protein; hypothetical protein complement(3499411..3499734) Desulfotomaculum ruminis DSM 2154 10739864 YP_004546932.1 CDS Desru_3443 NC_015589.1 3499837 3500028 R KEGG: dae:Dtox_3595 hypothetical protein; hypothetical protein complement(3499837..3500028) Desulfotomaculum ruminis DSM 2154 10739865 YP_004546933.1 CDS Desru_3444 NC_015589.1 3500105 3500971 R PFAM: pyruvate carboxyltransferase; KEGG: dae:Dtox_1022 pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(3500105..3500971) Desulfotomaculum ruminis DSM 2154 10739866 YP_004546934.1 CDS Desru_3445 NC_015589.1 3501041 3501670 R PFAM: Nitrogenase iron-iron accessory protein AnfO; KEGG: drm:Dred_2813 hypothetical protein; nitrogenase iron-iron accessory protein AnfO complement(3501041..3501670) Desulfotomaculum ruminis DSM 2154 10739867 YP_004546935.1 CDS Desru_3446 NC_015589.1 3501698 3502006 R PFAM: Sucraseferredoxin family protein; KEGG: dae:Dtox_1031 ferredoxin, 2Fe-2S; sucraseferredoxin family protein complement(3501698..3502006) Desulfotomaculum ruminis DSM 2154 10739868 YP_004546936.1 CDS Desru_3447 NC_015589.1 3502025 3502966 R PFAM: Radical SAM domain protein; KEGG: drm:Dred_2814 radical SAM domain-containing protein; radical SAM protein complement(3502025..3502966) Desulfotomaculum ruminis DSM 2154 10739869 YP_004546937.1 CDS Desru_3448 NC_015589.1 3502932 3504377 R PFAM: oxidoreductase/nitrogenase component 1; KEGG: drm:Dred_2815 nitrogenase; oxidoreductase/nitrogenase component 1 complement(3502932..3504377) Desulfotomaculum ruminis DSM 2154 10739870 YP_004546938.1 CDS Desru_3449 NC_015589.1 3504390 3505739 R KEGG: drm:Dred_2816 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase MoFe cofactor biosynthesis protein NifE complement(3504390..3505739) Desulfotomaculum ruminis DSM 2154 10739871 YP_004546939.1 CDS Desru_3450 NC_015589.1 3505779 3507173 R TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: drm:Dred_2817 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta complement(3505779..3507173) Desulfotomaculum ruminis DSM 2154 10739872 YP_004546940.1 CDS Desru_3451 NC_015589.1 3507167 3508786 R KEGG: drm:Dred_2818 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha complement(3507167..3508786) Desulfotomaculum ruminis DSM 2154 10739873 YP_004546941.1 CDS Desru_3452 NC_015589.1 3508814 3509194 R PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2819 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(3508814..3509194) Desulfotomaculum ruminis DSM 2154 10739874 YP_004546942.1 CDS Desru_3453 NC_015589.1 3509207 3509536 R PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2820 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(3509207..3509536) Desulfotomaculum ruminis DSM 2154 10739875 YP_004546943.1 CDS Desru_3454 NC_015589.1 3509564 3510382 R TIGRFAM: nitrogenase iron protein; KEGG: drm:Dred_2821 nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein complement(3509564..3510382) Desulfotomaculum ruminis DSM 2154 10739876 YP_004546944.1 CDS Desru_3455 NC_015589.1 3510732 3512351 R KEGG: drm:Dred_0455 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter complement(3510732..3512351) Desulfotomaculum ruminis DSM 2154 10739877 YP_004546945.1 CDS Desru_3456 NC_015589.1 3512363 3513016 R PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_0454 secretion protein HlyD; secretion protein HlyD family protein complement(3512363..3513016) Desulfotomaculum ruminis DSM 2154 10739878 YP_004546946.1 CDS Desru_3457 NC_015589.1 3513035 3513880 R PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_0453 secretion protein HlyD family protein; secretion protein HlyD family protein complement(3513035..3513880) Desulfotomaculum ruminis DSM 2154 10739879 YP_004546947.1 CDS Desru_3458 NC_015589.1 3514040 3515848 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_1552 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region; diguanylate cyclase complement(3514040..3515848) Desulfotomaculum ruminis DSM 2154 10739880 YP_004546948.1 CDS Desru_3459 NC_015589.1 3516228 3516713 D PFAM: RDD domain containing protein; KEGG: drm:Dred_0451 RDD domain-containing protein; RDD domain-containing protein 3516228..3516713 Desulfotomaculum ruminis DSM 2154 10739881 YP_004546949.1 CDS Desru_3460 NC_015589.1 3516786 3517238 R PFAM: protein of unknown function DUF327; KEGG: drm:Dred_0450 hypothetical protein; hypothetical protein complement(3516786..3517238) Desulfotomaculum ruminis DSM 2154 10739882 YP_004546950.1 CDS Desru_3461 NC_015589.1 3517436 3517981 D PFAM: carbonic anhydrase; KEGG: drm:Dred_0448 hypothetical protein; carbonic anhydrase 3517436..3517981 Desulfotomaculum ruminis DSM 2154 10739883 YP_004546951.1 CDS Desru_3462 NC_015589.1 3518037 3518702 R PFAM: Integral membrane protein TerC; KEGG: hmo:HM1_0419 hypothetical protein; integral membrane protein TerC complement(3518037..3518702) Desulfotomaculum ruminis DSM 2154 10739884 YP_004546952.1 CDS Desru_3463 NC_015589.1 3518964 3519404 D KEGG: drm:Dred_0447 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 3518964..3519404 Desulfotomaculum ruminis DSM 2154 10739885 YP_004546953.1 CDS Desru_3464 NC_015589.1 3519451 3519750 R KEGG: dae:Dtox_3064 hypothetical protein; hypothetical protein complement(3519451..3519750) Desulfotomaculum ruminis DSM 2154 10739886 YP_004546954.1 CDS Desru_3465 NC_015589.1 3519929 3520387 R PFAM: MgtC/SapB transporter; KEGG: drm:Dred_0446 MgtC/SapB transporter; MgtC/SapB transporter complement(3519929..3520387) Desulfotomaculum ruminis DSM 2154 10739887 YP_004546955.1 CDS Desru_3466 NC_015589.1 3520623 3521402 D TIGRFAM: phosphatidylserine decarboxylase; KEGG: drm:Dred_0445 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 3520623..3521402 Desulfotomaculum ruminis DSM 2154 10739888 YP_004546956.1 CDS Desru_3467 NC_015589.1 3521440 3521781 R KEGG: drm:Dred_0444 hypothetical protein; hypothetical protein complement(3521440..3521781) Desulfotomaculum ruminis DSM 2154 10739889 YP_004546957.1 CDS Desru_3468 NC_015589.1 3522009 3523424 R PFAM: amino acid permease-associated region; KEGG: gwc:GWCH70_0831 amino acid permease-associated region; amino acid permease-associated protein complement(3522009..3523424) Desulfotomaculum ruminis DSM 2154 10739890 YP_004546958.1 CDS Desru_3469 NC_015589.1 3523769 3526321 R TIGRFAM: alpha-glucan phosphorylase; KEGG: drm:Dred_0443 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase complement(3523769..3526321) Desulfotomaculum ruminis DSM 2154 10739891 YP_004546959.1 CDS Desru_3470 NC_015589.1 3526461 3527375 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_0442 hypothetical protein; hypothetical protein complement(3526461..3527375) Desulfotomaculum ruminis DSM 2154 10739892 YP_004546960.1 CDS Desru_3471 NC_015589.1 3527588 3528862 R SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: dvm:DvMF_1477 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; diguanylate cyclase complement(3527588..3528862) Desulfotomaculum ruminis DSM 2154 10739893 YP_004546961.1 CDS Desru_3472 NC_015589.1 3529005 3530603 R KEGG: dae:Dtox_3366 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; chemotaxis sensory transducer protein complement(3529005..3530603) Desulfotomaculum ruminis DSM 2154 10739894 YP_004546962.1 CDS Desru_3473 NC_015589.1 3530793 3530975 R KEGG: mfs:MFS40622_0132 hypothetical protein; hypothetical protein complement(3530793..3530975) Desulfotomaculum ruminis DSM 2154 10739895 YP_004546963.1 CDS Desru_3474 NC_015589.1 3531497 3532243 R KEGG: tpd:Teth39_1182 ATPase central domain-containing protein; ATPase central domain-containing protein complement(3531497..3532243) Desulfotomaculum ruminis DSM 2154 10739896 YP_004546964.1 CDS Desru_3475 NC_015589.1 3532373 3532723 R KEGG: hor:Hore_11230 hypothetical protein; hypothetical protein complement(3532373..3532723) Desulfotomaculum ruminis DSM 2154 10739897 YP_004546965.1 CDS Desru_3476 NC_015589.1 3533073 3533777 R KEGG: dae:Dtox_2737 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(3533073..3533777) Desulfotomaculum ruminis DSM 2154 10739898 YP_004546966.1 CDS Desru_3477 NC_015589.1 3533941 3534687 R KEGG: drm:Dred_1592 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase type I complement(3533941..3534687) Desulfotomaculum ruminis DSM 2154 10739899 YP_004546967.1 CDS Desru_3478 NC_015589.1 3534859 3535233 D KEGG: pca:Pcar_2485 hypothetical protein; hypothetical protein 3534859..3535233 Desulfotomaculum ruminis DSM 2154 10739900 YP_004546968.1 CDS Desru_3479 NC_015589.1 3535348 3535545 R KEGG: amt:Amet_3208 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3535348..3535545) Desulfotomaculum ruminis DSM 2154 10739901 YP_004546969.1 CDS Desru_3480 NC_015589.1 3535735 3535866 R hypothetical protein complement(3535735..3535866) Desulfotomaculum ruminis DSM 2154 10739902 YP_004546970.1 CDS Desru_3481 NC_015589.1 3536292 3536612 R KEGG: cag:Cagg_1995 protein of unknown function UPF0052 and CofD; hypothetical protein complement(3536292..3536612) Desulfotomaculum ruminis DSM 2154 10739903 YP_004546971.1 CDS Desru_3482 NC_015589.1 3536612 3537190 R KEGG: drm:Dred_2589 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(3536612..3537190) Desulfotomaculum ruminis DSM 2154 10739904 YP_004546972.1 CDS Desru_3483 NC_015589.1 3537205 3537522 R KEGG: ath:AT2G38250 DNA-binding protein-related; hypothetical protein complement(3537205..3537522) Desulfotomaculum ruminis DSM 2154 10739905 YP_004546973.1 CDS Desru_3484 NC_015589.1 3537642 3537965 R KEGG: dmo:Dmoj_GI19701 GI19701 gene product from transcript GI19701-RA; hypothetical protein complement(3537642..3537965) Desulfotomaculum ruminis DSM 2154 10739906 YP_004546974.1 CDS Desru_3485 NC_015589.1 3537976 3540048 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: cja:CJA_1396 putative hemolysin; peptidase S24/S26A/S26B complement(3537976..3540048) Desulfotomaculum ruminis DSM 2154 10739907 YP_004546975.1 CDS Desru_3486 NC_015589.1 3540057 3540419 R KEGG: drm:Dred_1223 hypothetical protein; hypothetical protein complement(3540057..3540419) Desulfotomaculum ruminis DSM 2154 10739908 YP_004546976.1 CDS Desru_3487 NC_015589.1 3540697 3541470 R KEGG: amt:Amet_2433 hypothetical protein; hypothetical protein complement(3540697..3541470) Desulfotomaculum ruminis DSM 2154 10739909 YP_004546977.1 CDS Desru_3488 NC_015589.1 3541470 3541760 R KEGG: bbe:BBR47_06310 hypothetical protein; hypothetical protein complement(3541470..3541760) Desulfotomaculum ruminis DSM 2154 10739910 YP_004546978.1 CDS Desru_3489 NC_015589.1 3541776 3542771 R KEGG: gka:GK0543 hypothetical protein; hypothetical protein complement(3541776..3542771) Desulfotomaculum ruminis DSM 2154 10739911 YP_004546979.1 CDS Desru_3490 NC_015589.1 3542789 3543031 R KEGG: dhd:Dhaf_4814 hypothetical protein; hypothetical protein complement(3542789..3543031) Desulfotomaculum ruminis DSM 2154 10739912 YP_004546980.1 CDS Desru_3491 NC_015589.1 3543078 3543209 R KEGG: gym:GYMC10_5372 phage uncharacterized protein, XkdX family; TIGRFAM: phage uncharacterized protein, XkdX family; PFAM: uncharacterised protein XkdX; phage protein XkdX family complement(3543078..3543209) Desulfotomaculum ruminis DSM 2154 10739913 YP_004546981.1 CDS Desru_3492 NC_015589.1 3543241 3543828 R KEGG: gym:GYMC10_5391 hypothetical protein; hypothetical protein complement(3543241..3543828) Desulfotomaculum ruminis DSM 2154 10739914 YP_004546982.1 CDS Desru_3493 NC_015589.1 3543825 3544937 R PFAM: Baseplate J family protein; KEGG: gym:GYMC10_5392 baseplate J family protein; baseplate J family protein complement(3543825..3544937) Desulfotomaculum ruminis DSM 2154 10739915 YP_004546983.1 CDS Desru_3494 NC_015589.1 3544934 3545383 R KEGG: dae:Dtox_4249 hypothetical protein; hypothetical protein complement(3544934..3545383) Desulfotomaculum ruminis DSM 2154 10739916 YP_004546984.1 CDS Desru_3495 NC_015589.1 3545384 3545791 R KEGG: dae:Dtox_4248 hypothetical protein; hypothetical protein complement(3545384..3545791) Desulfotomaculum ruminis DSM 2154 10739917 YP_004546985.1 CDS Desru_3496 NC_015589.1 3545778 3546782 R KEGG: dae:Dtox_4247 hypothetical protein; hypothetical protein complement(3545778..3546782) Desulfotomaculum ruminis DSM 2154 10739918 YP_004546986.1 CDS Desru_3497 NC_015589.1 3546779 3547423 R KEGG: dae:Dtox_4246 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein complement(3546779..3547423) Desulfotomaculum ruminis DSM 2154 10739919 YP_004546987.1 CDS Desru_3498 NC_015589.1 3547447 3548949 R KEGG: dae:Dtox_4245 phage tail tape measure protein, TP901 family; hypothetical protein complement(3547447..3548949) Desulfotomaculum ruminis DSM 2154 10739920 YP_004546988.1 CDS Desru_3499 NC_015589.1 3548946 3549092 R KEGG: gym:GYMC10_5398 hypothetical protein; hypothetical protein complement(3548946..3549092) Desulfotomaculum ruminis DSM 2154 10739921 YP_004546989.1 CDS Desru_3500 NC_015589.1 3549113 3549520 R PFAM: XkdN-like protein; KEGG: dae:Dtox_4243 XkdN-like protein; XkdN-like protein complement(3549113..3549520) Desulfotomaculum ruminis DSM 2154 10739922 YP_004546990.1 CDS Desru_3501 NC_015589.1 3549531 3549941 R PFAM: XkdM protein, phage-like element PBSX; KEGG: gym:GYMC10_5400 XkdM protein, phage-like element PBSX; XkdM protein phage-like element PBSX complement(3549531..3549941) Desulfotomaculum ruminis DSM 2154 10739923 YP_004546991.1 CDS Desru_3502 NC_015589.1 3549954 3551405 R KEGG: dae:Dtox_4241 hypothetical protein; hypothetical protein complement(3549954..3551405) Desulfotomaculum ruminis DSM 2154 10739924 YP_004546992.1 CDS Desru_3503 NC_015589.1 3551405 3551590 R KEGG: dae:Dtox_4240 hypothetical protein; hypothetical protein complement(3551405..3551590) Desulfotomaculum ruminis DSM 2154 10739925 YP_004546993.1 CDS Desru_3504 NC_015589.1 3551590 3552570 R KEGG: dae:Dtox_4239 hypothetical protein; hypothetical protein complement(3551590..3552570) Desulfotomaculum ruminis DSM 2154 10739926 YP_004546994.1 CDS Desru_3505 NC_015589.1 3552571 3552690 R KEGG: ani:AN0247.2 hypothetical protein; hypothetical protein complement(3552571..3552690) Desulfotomaculum ruminis DSM 2154 10739927 YP_004546995.1 CDS Desru_3506 NC_015589.1 3552881 3553396 R KEGG: amt:Amet_2405 putative sigma factor; putative sigma factor complement(3552881..3553396) Desulfotomaculum ruminis DSM 2154 10739928 YP_004546996.1 CDS Desru_3507 NC_015589.1 3553763 3554425 D PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: dau:Daud_1912 putative prophage repressor; peptidase S24/S26A/S26B 3553763..3554425 Desulfotomaculum ruminis DSM 2154 10739929 YP_004546997.1 CDS Desru_3508 NC_015589.1 3554703 3556115 D PFAM: transposase IS4 family protein; KEGG: toc:Toce_1418 transposase IS4 family protein; transposase IS4 family protein 3554703..3556115 Desulfotomaculum ruminis DSM 2154 10739930 YP_004546998.1 CDS Desru_3509 NC_015589.1 3556197 3558212 R TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: ssm:Spirs_2639 GAF modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein; PAS sensor protein complement(3556197..3558212) Desulfotomaculum ruminis DSM 2154 10739931 YP_004546999.1 CDS Desru_3510 NC_015589.1 3558824 3560299 D PFAM: Aldehyde Dehydrogenase; KEGG: ssm:Spirs_2638 aldehyde dehydrogenase; aldehyde dehydrogenase 3558824..3560299 Desulfotomaculum ruminis DSM 2154 10739932 YP_004547000.1 CDS Desru_3511 NC_015589.1 3560328 3560573 R KEGG: sak:SAK_1440 surface protein Spb1; hypothetical protein complement(3560328..3560573) Desulfotomaculum ruminis DSM 2154 10739933 YP_004547001.1 CDS Desru_3512 NC_015589.1 3560651 3561409 R PFAM: Methyltransferase type 11; KEGG: bai:BAA_1355 hypothetical protein; type 11 methyltransferase complement(3560651..3561409) Desulfotomaculum ruminis DSM 2154 10739934 YP_004547002.1 CDS Desru_3513 NC_015589.1 3561530 3562345 R PFAM: alpha/beta hydrolase fold; KEGG: cbi:CLJ_B2157 alpha/beta superfamily hydrolase; alpha/beta hydrolase fold protein complement(3561530..3562345) Desulfotomaculum ruminis DSM 2154 10739935 YP_004547003.1 CDS Desru_3514 NC_015589.1 3562515 3563318 R PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_3199 nitrate reductase, gamma subunit; nitrate reductase subunit gamma complement(3562515..3563318) Desulfotomaculum ruminis DSM 2154 10739936 YP_004547004.1 CDS Desru_3515 NC_015589.1 3563321 3563923 R PFAM: regulatory protein TetR; KEGG: tjr:TherJR_0157 transcriptional regulator, TetR family; regulatory protein TetR complement(3563321..3563923) Desulfotomaculum ruminis DSM 2154 10739937 YP_004547005.1 CDS Desru_3516 NC_015589.1 3564332 3565156 R KEGG: dat:HRM2_36750 hypothetical protein; hypothetical protein complement(3564332..3565156) Desulfotomaculum ruminis DSM 2154 10739938 YP_004547006.1 CDS Desru_3517 NC_015589.1 3565556 3567778 R KEGG: cth:Cthe_3214 hypothetical protein; hypothetical protein complement(3565556..3567778) Desulfotomaculum ruminis DSM 2154 10739939 YP_004547007.1 CDS Desru_3518 NC_015589.1 3567780 3568208 R KEGG: cth:Cthe_3213 hypothetical protein; hypothetical protein complement(3567780..3568208) Desulfotomaculum ruminis DSM 2154 10739940 YP_004547008.1 CDS Desru_3519 NC_015589.1 3568211 3569548 R PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3212 hypothetical protein; hypothetical protein complement(3568211..3569548) Desulfotomaculum ruminis DSM 2154 10739941 YP_004547009.1 CDS Desru_3520 NC_015589.1 3569545 3571200 R PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3211 hypothetical protein; hypothetical protein complement(3569545..3571200) Desulfotomaculum ruminis DSM 2154 10739942 YP_004547010.1 CDS Desru_3521 NC_015589.1 3571182 3571856 R PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3210 hypothetical protein; hypothetical protein complement(3571182..3571856) Desulfotomaculum ruminis DSM 2154 10739943 YP_004547011.1 CDS Desru_3522 NC_015589.1 3571853 3573484 R KEGG: cbb:CLD_2403 hypothetical protein; hypothetical protein complement(3571853..3573484) Desulfotomaculum ruminis DSM 2154 10739944 YP_004547012.1 CDS Desru_3523 NC_015589.1 3573495 3574412 R KEGG: pct:PC1_3262 hypothetical protein; hypothetical protein complement(3573495..3574412) Desulfotomaculum ruminis DSM 2154 10739945 YP_004547013.1 CDS Desru_3524 NC_015589.1 3574857 3576215 R KEGG: dhd:Dhaf_2005 zinc finger SWIM domain protein; zinc finger SWIM domain-containing protein complement(3574857..3576215) Desulfotomaculum ruminis DSM 2154 10739946 YP_004547014.1 CDS Desru_3525 NC_015589.1 3577130 3577717 R KEGG: dhd:Dhaf_0677 hypothetical protein; hypothetical protein complement(3577130..3577717) Desulfotomaculum ruminis DSM 2154 10739947 YP_004547015.1 CDS Desru_3526 NC_015589.1 3578372 3579787 R KEGG: btb:BMB171_P0033 hypothetical protein; hypothetical protein complement(3578372..3579787) Desulfotomaculum ruminis DSM 2154 10739948 YP_004547016.1 CDS Desru_3527 NC_015589.1 3579809 3581131 R KEGG: ccb:Clocel_0824 hypothetical protein; hypothetical protein complement(3579809..3581131) Desulfotomaculum ruminis DSM 2154 10739949 YP_004547017.1 CDS Desru_3528 NC_015589.1 3581131 3582792 R KEGG: bca:BCE_0422 hypothetical protein; hypothetical protein complement(3581131..3582792) Desulfotomaculum ruminis DSM 2154 10739950 YP_004547018.1 CDS Desru_3529 NC_015589.1 3582920 3584503 R PFAM: Resolvase domain; Recombinase; KEGG: ccb:Clocel_0847 resolvase domain; resolvase domain-containing protein complement(3582920..3584503) Desulfotomaculum ruminis DSM 2154 10739951 YP_004547019.1 CDS Desru_3530 NC_015589.1 3584500 3585810 R PFAM: Resolvase domain; Recombinase; KEGG: ccb:Clocel_0846 resolvase domain; resolvase domain-containing protein complement(3584500..3585810) Desulfotomaculum ruminis DSM 2154 10739952 YP_004547020.1 CDS Desru_3531 NC_015589.1 3586018 3586425 R KEGG: ccb:Clocel_0844 hypothetical protein; hypothetical protein complement(3586018..3586425) Desulfotomaculum ruminis DSM 2154 10739953 YP_004547021.1 CDS Desru_3532 NC_015589.1 3586631 3587338 R KEGG: cby:CLM_2289 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(3586631..3587338) Desulfotomaculum ruminis DSM 2154 10739954 YP_004547022.1 CDS Desru_3533 NC_015589.1 3587331 3587732 R KEGG: cce:Ccel_2819 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; toxin secretion/phage lysis holin complement(3587331..3587732) Desulfotomaculum ruminis DSM 2154 10739955 YP_004547023.1 CDS Desru_3534 NC_015589.1 3587806 3588225 R KEGG: dfe:Dfer_3080 type III restriction protein res subunit; hypothetical protein complement(3587806..3588225) Desulfotomaculum ruminis DSM 2154 10739956 YP_004547024.1 CDS Desru_3535 NC_015589.1 3588244 3588771 R KEGG: cai:Caci_4910 glycoside hydrolase family 59; hypothetical protein complement(3588244..3588771) Desulfotomaculum ruminis DSM 2154 10739957 YP_004547025.1 CDS Desru_3536 NC_015589.1 3588771 3589502 R KEGG: pfs:PFLU3992 putative gluconokinase; hypothetical protein complement(3588771..3589502) Desulfotomaculum ruminis DSM 2154 10739958 YP_004547026.1 CDS Desru_3537 NC_015589.1 3589515 3589925 R KEGG: bfu:BC1G_00232 hypothetical protein; hypothetical protein complement(3589515..3589925) Desulfotomaculum ruminis DSM 2154 10739959 YP_004547027.1 CDS Desru_3538 NC_015589.1 3589927 3590268 R KEGG: scl:sce6752 hypothetical protein; hypothetical protein complement(3589927..3590268) Desulfotomaculum ruminis DSM 2154 10739960 YP_004547028.1 CDS Desru_3539 NC_015589.1 3590280 3590891 R KEGG: mmw:Mmwyl1_3120 ribulose-bisphosphate carboxylase; hypothetical protein complement(3590280..3590891) Desulfotomaculum ruminis DSM 2154 10739961 YP_004547029.1 CDS Desru_3540 NC_015589.1 3590896 3592308 R KEGG: mhu:Mhun_3126 PKD; hypothetical protein complement(3590896..3592308) Desulfotomaculum ruminis DSM 2154 10739962 YP_004547030.1 CDS Desru_3541 NC_015589.1 3592301 3595444 R PFAM: G-protein, gamma-like subunit; KEGG: cth:Cthe_1709 phage-related protein-like protein; G-protein gamma-like subunit complement(3592301..3595444) Desulfotomaculum ruminis DSM 2154 10739963 YP_004547031.1 CDS Desru_3542 NC_015589.1 3595665 3595961 R KEGG: cpe:CPE1128 hypothetical protein; hypothetical protein complement(3595665..3595961) Desulfotomaculum ruminis DSM 2154 10739964 YP_004547032.1 CDS Desru_3543 NC_015589.1 3596010 3596894 R TIGRFAM: phage major tail protein, phi13 family; KEGG: clj:CLJU_c03640 phage protein; phage major tail protein phi13 family complement(3596010..3596894) Desulfotomaculum ruminis DSM 2154 10739965 YP_004547033.1 CDS Desru_3544 NC_015589.1 3596898 3597266 R KEGG: bcb:BCB4264_A2628 conserved structural protein; hypothetical protein complement(3596898..3597266) Desulfotomaculum ruminis DSM 2154 10739966 YP_004547034.1 CDS Desru_3545 NC_015589.1 3597263 3597646 R TIGRFAM: phage protein, HK97 gp10 family; KEGG: gyc:GYMC61_0631 phage protein, HK97 GP10 family; phage protein HK97 gp10 family complement(3597263..3597646) Desulfotomaculum ruminis DSM 2154 10739967 YP_004547035.1 CDS Desru_3546 NC_015589.1 3597636 3597974 R TIGRFAM: phage head-tail adaptor; KEGG: bcu:BCAH820_4380 phage head-tail adaptor, putative; phage head-tail adaptor complement(3597636..3597974) Desulfotomaculum ruminis DSM 2154 10739968 YP_004547036.1 CDS Desru_3547 NC_015589.1 3597977 3598252 R TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ccb:Clocel_0785 bacteriophage QLRG family, putative DNA packaging; hypothetical protein complement(3597977..3598252) Desulfotomaculum ruminis DSM 2154 10739969 YP_004547037.1 CDS Desru_3548 NC_015589.1 3598271 3598600 R KEGG: ckr:CKR_2339 hypothetical protein; hypothetical protein complement(3598271..3598600) Desulfotomaculum ruminis DSM 2154 10739970 YP_004547038.1 CDS Desru_3549 NC_015589.1 3598610 3599809 R TIGRFAM: phage major capsid protein, HK97 family; KEGG: hmo:HM1_2880 phage major capsid protein, hk97 family; phage major capsid protein HK97 family complement(3598610..3599809) Desulfotomaculum ruminis DSM 2154 10739971 YP_004547039.1 CDS Desru_3550 NC_015589.1 3599826 3600533 R PFAM: peptidase S14 ClpP; KEGG: cce:Ccel_2835 peptidase S14 ClpP; peptidase S14 ClpP complement(3599826..3600533) Desulfotomaculum ruminis DSM 2154 10739972 YP_004547040.1 CDS Desru_3551 NC_015589.1 3600530 3601753 R KEGG: bse:Bsel_3007 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein HK97 family complement(3600530..3601753) Desulfotomaculum ruminis DSM 2154 10739973 YP_004547041.1 CDS Desru_3552 NC_015589.1 3601837 3602808 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: cth:Cthe_0824 copper amine oxidase-like protein; copper amine oxidase-like domain-containing protein complement(3601837..3602808) Desulfotomaculum ruminis DSM 2154 10739974 YP_004547042.1 CDS Desru_3553 NC_015589.1 3602894 3604498 R KEGG: ckr:CKR_2343 hypothetical protein; manually curated; PFAM: Terminase; terminase complement(3602894..3604498) Desulfotomaculum ruminis DSM 2154 10739975 YP_004547043.1 CDS Desru_3554 NC_015589.1 3604580 3604768 R KEGG: hmo:HM1_2957 hypothetical protein; hypothetical protein complement(3604580..3604768) Desulfotomaculum ruminis DSM 2154 10739976 YP_004547044.1 CDS Desru_3555 NC_015589.1 3604774 3605223 R PFAM: AIG2 family protein; KEGG: thx:Thet_1660 AIG2 family protein; AIG2 family protein complement(3604774..3605223) Desulfotomaculum ruminis DSM 2154 10739977 YP_004547045.1 CDS Desru_3556 NC_015589.1 3605262 3606161 R KEGG: ttm:Tthe_0787 hypothetical protein; hypothetical protein complement(3605262..3606161) Desulfotomaculum ruminis DSM 2154 10739978 YP_004547046.1 CDS Desru_3557 NC_015589.1 3606304 3606531 R KEGG: thx:Thet_1662 hypothetical protein; hypothetical protein complement(3606304..3606531) Desulfotomaculum ruminis DSM 2154 10739979 YP_004547047.1 CDS Desru_3558 NC_015589.1 3606528 3607187 R KEGG: hmo:HM1_2948 hypothetical protein; hypothetical protein complement(3606528..3607187) Desulfotomaculum ruminis DSM 2154 10739980 YP_004547048.1 CDS Desru_3559 NC_015589.1 3607253 3608488 R KEGG: hmo:HM1_2946 DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; DNA methylase N-4/N-6 domain-containing protein complement(3607253..3608488) Desulfotomaculum ruminis DSM 2154 10739981 YP_004547049.1 CDS Desru_3560 NC_015589.1 3608495 3609073 R KEGG: hmo:HM1_2945 hypothetical protein; hypothetical protein complement(3608495..3609073) Desulfotomaculum ruminis DSM 2154 10739982 YP_004547050.1 CDS Desru_3561 NC_015589.1 3609286 3609660 D KEGG: swo:Swol_0287 hypothetical protein; hypothetical protein 3609286..3609660 Desulfotomaculum ruminis DSM 2154 10739983 YP_004547051.1 CDS Desru_3562 NC_015589.1 3609660 3609950 D TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: swo:Swol_0286 hypothetical protein; RelE/StbE family addiction module toxin 3609660..3609950 Desulfotomaculum ruminis DSM 2154 10739984 YP_004547052.1 CDS Desru_3563 NC_015589.1 3609990 3610343 R KEGG: cce:Ccel_2845 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(3609990..3610343) Desulfotomaculum ruminis DSM 2154 10739985 YP_004547053.1 CDS Desru_3564 NC_015589.1 3610473 3610922 R KEGG: hmo:HM1_2944 hypothetical protein; hypothetical protein complement(3610473..3610922) Desulfotomaculum ruminis DSM 2154 10739986 YP_004547054.1 CDS Desru_3565 NC_015589.1 3610919 3612274 R KEGG: hmo:HM1_2943 phage-associated helicase, SNF2 family; PFAM: SNF2-related protein; SMART: DEAD-like helicase; SNF2-like protein complement(3610919..3612274) Desulfotomaculum ruminis DSM 2154 10739987 YP_004547055.1 CDS Desru_3566 NC_015589.1 3612255 3612548 R PFAM: VRR-NUC domain-containing protein; KEGG: amt:Amet_4048 VRR_NUC domain-containing protein; VRR-NUC domain-containing protein complement(3612255..3612548) Desulfotomaculum ruminis DSM 2154 10739988 YP_004547056.1 CDS Desru_3567 NC_015589.1 3612876 3615227 R PFAM: virulence-associated E family protein; KEGG: thx:Thet_1672 virulence-associated E family protein; virulence-associated E family protein complement(3612876..3615227) Desulfotomaculum ruminis DSM 2154 10739989 YP_004547057.1 CDS Desru_3568 NC_015589.1 3615224 3615637 R KEGG: hmo:HM1_2897 hypothetical protein; hypothetical protein complement(3615224..3615637) Desulfotomaculum ruminis DSM 2154 10739990 YP_004547058.1 CDS Desru_3569 NC_015589.1 3615624 3616409 R PFAM: phage antirepressor protein; BRO domain protein; KEGG: clj:CLJU_c03400 putative prophage antirepressor; phage antirepressor protein complement(3615624..3616409) Desulfotomaculum ruminis DSM 2154 10739991 YP_004547059.1 CDS Desru_3570 NC_015589.1 3616505 3618451 R KEGG: thx:Thet_1675 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(3616505..3618451) Desulfotomaculum ruminis DSM 2154 10739992 YP_004547060.1 CDS Desru_3571 NC_015589.1 3618436 3619014 R PFAM: NUMOD4 domain protein; HNH endonuclease; KEGG: cce:Ccel_2857 HNH endonuclease; NUMOD4 domain-containing protein complement(3618436..3619014) Desulfotomaculum ruminis DSM 2154 10739993 YP_004547061.1 CDS Desru_3572 NC_015589.1 3619011 3619589 R KEGG: thx:Thet_1676 hypothetical protein; hypothetical protein complement(3619011..3619589) Desulfotomaculum ruminis DSM 2154 10739994 YP_004547062.1 CDS Desru_3573 NC_015589.1 3619594 3620721 R KEGG: thx:Thet_1677 hypothetical protein; hypothetical protein complement(3619594..3620721) Desulfotomaculum ruminis DSM 2154 10739995 YP_004547063.1 CDS Desru_3574 NC_015589.1 3620718 3621041 R KEGG: thx:Thet_1678 rRNA biogenesis protein rrp5; rRNA biogenesis protein rrp5 complement(3620718..3621041) Desulfotomaculum ruminis DSM 2154 10739996 YP_004547064.1 CDS Desru_3575 NC_015589.1 3621004 3621228 R KEGG: bca:BCE_0373 hypothetical protein; hypothetical protein complement(3621004..3621228) Desulfotomaculum ruminis DSM 2154 10739997 YP_004547065.1 CDS Desru_3576 NC_015589.1 3621310 3621693 R PFAM: Sigma-70 region 4 type 2; KEGG: mcu:HMPREF0573_11266 hypothetical protein; sigma-70 region 4 type 2 complement(3621310..3621693) Desulfotomaculum ruminis DSM 2154 10739998 YP_004547066.1 CDS Desru_3577 NC_015589.1 3621856 3622005 R KEGG: thx:Thet_1681 hypothetical protein; hypothetical protein complement(3621856..3622005) Desulfotomaculum ruminis DSM 2154 10739999 YP_004547067.1 CDS Desru_3578 NC_015589.1 3622352 3623335 D KEGG: thx:Thet_1682 hypothetical protein; hypothetical protein 3622352..3623335 Desulfotomaculum ruminis DSM 2154 10740000 YP_004547068.1 CDS Desru_3579 NC_015589.1 3623328 3623789 D KEGG: thx:Thet_1683 hypothetical protein; hypothetical protein 3623328..3623789 Desulfotomaculum ruminis DSM 2154 10740001 YP_004547069.1 CDS Desru_3580 NC_015589.1 3623782 3625557 D KEGG: thx:Thet_1684 hypothetical protein; hypothetical protein 3623782..3625557 Desulfotomaculum ruminis DSM 2154 10740002 YP_004547070.1 CDS Desru_3581 NC_015589.1 3625582 3625806 D TIGRFAM: DNA binding domain protein, excisionase family; KEGG: thx:Thet_1685 DNA-binding domain-containing protein, excisionase family; excisionase family DNA binding domain-containing protein 3625582..3625806 Desulfotomaculum ruminis DSM 2154 10740003 YP_004547071.1 CDS Desru_3582 NC_015589.1 3625814 3627355 D KEGG: pmz:HMPREF0659_A6123 putative type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; adenine-specific DNA-methyltransferase 3625814..3627355 Desulfotomaculum ruminis DSM 2154 10740004 YP_004547072.1 CDS Desru_3583 NC_015589.1 3627345 3627854 D PFAM: restriction modification system DNA specificity domain; KEGG: nmn:NMCC_1141 hypothetical protein; restriction modification system DNA specificity domain-containing protein 3627345..3627854 Desulfotomaculum ruminis DSM 2154 10740005 YP_004547073.1 CDS Desru_3585 NC_015589.1 3628602 3629594 D PFAM: integrase family protein; KEGG: clo:HMPREF0868_0492 phage integrase, N-terminal SAM domain protein; integrase family protein 3628602..3629594 Desulfotomaculum ruminis DSM 2154 10740007 YP_004547074.1 CDS Desru_3586 NC_015589.1 3629608 3630798 D PFAM: restriction modification system DNA specificity domain; KEGG: hpa:HPAG1_0437 type I restriction enzyme S protein; restriction modification system DNA specificity domain-containing protein 3629608..3630798 Desulfotomaculum ruminis DSM 2154 10740008 YP_004547075.1 CDS Desru_3587 NC_015589.1 3630823 3631671 D KEGG: aca:ACP_3246 hypothetical protein; hypothetical protein 3630823..3631671 Desulfotomaculum ruminis DSM 2154 10740009 YP_004547076.1 CDS Desru_3588 NC_015589.1 3631693 3634707 D TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: mpi:Mpet_1680 type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; type I site-specific deoxyribonuclease HsdR family 3631693..3634707 Desulfotomaculum ruminis DSM 2154 10740010 YP_004547077.1 CDS Desru_3589 NC_015589.1 3634724 3636805 D PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: fma:FMG_1371 hypothetical protein; hypothetical protein 3634724..3636805 Desulfotomaculum ruminis DSM 2154 10740011 YP_004547078.1 CDS Desru_3590 NC_015589.1 3637445 3637933 R KEGG: drm:Dred_2984 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein complement(3637445..3637933) Desulfotomaculum ruminis DSM 2154 10740013 YP_004547079.1 CDS Desru_3591 NC_015589.1 3638062 3638613 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: tjr:TherJR_2694 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(3638062..3638613) Desulfotomaculum ruminis DSM 2154 10740014 YP_004547080.1 CDS Desru_3592 NC_015589.1 3638564 3639046 R PFAM: thioesterase superfamily protein; KEGG: dae:Dtox_3930 thioesterase superfamily protein; thioesterase superfamily protein complement(3638564..3639046) Desulfotomaculum ruminis DSM 2154 10740015 YP_004547081.1 CDS Desru_3593 NC_015589.1 3639183 3641273 R TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: drm:Dred_2985 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; V-type H(+)-translocating pyrophosphatase complement(3639183..3641273) Desulfotomaculum ruminis DSM 2154 10740016 YP_004547082.1 CDS Desru_3594 NC_015589.1 3641316 3641543 R KEGG: drm:Dred_2986 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(3641316..3641543) Desulfotomaculum ruminis DSM 2154 10740017 YP_004547083.1 CDS Desru_3595 NC_015589.1 3641717 3643003 R TIGRFAM: enolase; KEGG: drm:Dred_2987 phosphopyruvate hydratase; PFAM: Enolase-like; enolase complement(3641717..3643003) Desulfotomaculum ruminis DSM 2154 10740018 YP_004547084.1 CDS Desru_3596 NC_015589.1 3643231 3644781 R TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: drm:Dred_2988 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; phosphoglycerate mutase complement(3643231..3644781) Desulfotomaculum ruminis DSM 2154 10740019 YP_004547085.1 CDS Desru_3597 NC_015589.1 3644881 3645648 R TIGRFAM: triosephosphate isomerase; KEGG: drm:Dred_2989 triose-phosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase complement(3644881..3645648) Desulfotomaculum ruminis DSM 2154 10740020 YP_004547086.1 CDS Desru_3598 NC_015589.1 3645794 3646975 R KEGG: drm:Dred_2990 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase complement(3645794..3646975) Desulfotomaculum ruminis DSM 2154 10740021 YP_004547087.1 CDS Desru_3599 NC_015589.1 3646979 3648019 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: drm:Dred_2991 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase complement(3646979..3648019) Desulfotomaculum ruminis DSM 2154 10740022 YP_004547088.1 CDS Desru_3600 NC_015589.1 3648163 3649587 R KEGG: drm:Dred_2992 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; RNA polymerase sigma-54 factor RpoN complement(3648163..3649587) Desulfotomaculum ruminis DSM 2154 10740023 YP_004547089.1 CDS Desru_3601 NC_015589.1 3649713 3650726 R KEGG: drm:Dred_2993 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein complement(3649713..3650726) Desulfotomaculum ruminis DSM 2154 10740024 YP_004547090.1 CDS Desru_3602 NC_015589.1 3650701 3651675 R PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: drm:Dred_2994 hypothetical protein; hypothetical protein complement(3650701..3651675) Desulfotomaculum ruminis DSM 2154 10740025 YP_004547091.1 CDS Desru_3603 NC_015589.1 3652121 3652945 R PFAM: polysaccharide deacetylase; KEGG: drm:Dred_3052 polysaccharide deacetylase; polysaccharide deacetylase complement(3652121..3652945) Desulfotomaculum ruminis DSM 2154 10740026 YP_004547092.1 CDS Desru_3604 NC_015589.1 3653210 3654550 R PFAM: protein of unknown function UPF0052 and CofD; KEGG: drm:Dred_3053 protein of unknown function UPF0052 and CofD; hypothetical protein complement(3653210..3654550) Desulfotomaculum ruminis DSM 2154 10740027 YP_004547093.1 CDS Desru_3605 NC_015589.1 3654562 3655431 R KEGG: drm:Dred_3054 hypothetical protein; hypothetical protein complement(3654562..3655431) Desulfotomaculum ruminis DSM 2154 10740028 YP_004547094.1 CDS Desru_3606 NC_015589.1 3655611 3655862 R KEGG: drm:Dred_3055 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphocarrier HPr family complement(3655611..3655862) Desulfotomaculum ruminis DSM 2154 10740029 YP_004547095.1 CDS Desru_3607 NC_015589.1 3655948 3656760 R KEGG: drm:Dred_3056 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase complement(3655948..3656760) Desulfotomaculum ruminis DSM 2154 10740030 YP_004547096.1 CDS Desru_3608 NC_015589.1 3656820 3658685 R TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: drm:Dred_3057 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C complement(3656820..3658685) Desulfotomaculum ruminis DSM 2154 10740031 YP_004547097.1 CDS Desru_3609 NC_015589.1 3658912 3659541 D PFAM: regulatory protein TetR; KEGG: drm:Dred_3059 TetR family transcriptional regulator; regulatory protein TetR 3658912..3659541 Desulfotomaculum ruminis DSM 2154 10740032 YP_004547098.1 CDS Desru_3610 NC_015589.1 3659611 3660672 D PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_3060 secretion protein HlyD family protein; secretion protein HlyD family protein 3659611..3660672 Desulfotomaculum ruminis DSM 2154 10740033 YP_004547099.1 CDS Desru_3611 NC_015589.1 3660675 3661382 D KEGG: drm:Dred_3061 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3660675..3661382 Desulfotomaculum ruminis DSM 2154 10740034 YP_004547100.1 CDS Desru_3612 NC_015589.1 3661375 3662505 D PFAM: ABC-2 type transporter; KEGG: drm:Dred_3062 ABC-2 type transporter; ABC transporter 3661375..3662505 Desulfotomaculum ruminis DSM 2154 10740035 YP_004547101.1 CDS Desru_3613 NC_015589.1 3662519 3663712 D PFAM: ABC-2 type transporter; KEGG: drm:Dred_3063 ABC-2 type transporter; ABC transporter 3662519..3663712 Desulfotomaculum ruminis DSM 2154 10740036 YP_004547102.1 CDS Desru_3614 NC_015589.1 3663892 3666771 R KEGG: drm:Dred_3065 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A complement(3663892..3666771) Desulfotomaculum ruminis DSM 2154 10740037 YP_004547103.1 CDS Desru_3615 NC_015589.1 3667103 3669127 R TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: drm:Dred_3066 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B complement(3667103..3669127) Desulfotomaculum ruminis DSM 2154 10740038 YP_004547104.1 CDS Desru_3616 NC_015589.1 3669225 3669788 R KEGG: drm:Dred_3067 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein complement(3669225..3669788) Desulfotomaculum ruminis DSM 2154 10740039 YP_004547105.1 CDS Desru_3617 NC_015589.1 3669959 3670222 D KEGG: drm:Dred_3068 hypothetical protein; hypothetical protein 3669959..3670222 Desulfotomaculum ruminis DSM 2154 10740040 YP_004547106.1 CDS Desru_3618 NC_015589.1 3670260 3670457 R PFAM: RNA-binding protein, predicted; KEGG: toc:Toce_0582 RNA-binding protein, predicted; RNA-binding protein complement(3670260..3670457) Desulfotomaculum ruminis DSM 2154 10740041 YP_004547107.1 CDS Desru_3619 NC_015589.1 3670476 3671711 R SMART: PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_3069 PDZ/DHR/GLGF domain-containing protein; PDZ/DHR/GLGF domain-containing protein complement(3670476..3671711) Desulfotomaculum ruminis DSM 2154 10740042 YP_004547108.1 CDS Desru_3620 NC_015589.1 3671735 3672880 R TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_3070 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(3671735..3672880) Desulfotomaculum ruminis DSM 2154 10740043 YP_004547109.1 CDS Desru_3621 NC_015589.1 3673118 3674251 R PFAM: Peptidase M23; KEGG: drm:Dred_3071 peptidase M23B; peptidase M23 complement(3673118..3674251) Desulfotomaculum ruminis DSM 2154 10740044 YP_004547110.1 CDS Desru_3622 NC_015589.1 3674273 3675160 R PFAM: protein of unknown function DUF214; KEGG: drm:Dred_3072 hypothetical protein; hypothetical protein complement(3674273..3675160) Desulfotomaculum ruminis DSM 2154 10740045 YP_004547111.1 CDS Desru_3623 NC_015589.1 3675150 3675836 R TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: drm:Dred_3073 cell division ATP-binding protein FtsE; SMART: AAA ATPase; cell division ATP-binding protein FtsE complement(3675150..3675836) Desulfotomaculum ruminis DSM 2154 10740046 YP_004547112.1 CDS Desru_3624 NC_015589.1 3676185 3677297 R PFAM: acyltransferase 3; KEGG: bbe:BBR47_30820 hypothetical protein; acyltransferase 3 complement(3676185..3677297) Desulfotomaculum ruminis DSM 2154 10740047 YP_004547113.1 CDS Desru_3625 NC_015589.1 3677367 3678311 R PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: drm:Dred_3074 transketolase, central region; transketolase central region complement(3677367..3678311) Desulfotomaculum ruminis DSM 2154 10740048 YP_004547114.1 CDS Desru_3626 NC_015589.1 3678436 3679254 R PFAM: Transketolase domain-containing protein; KEGG: drm:Dred_3075 transketolase domain-containing protein; transketolase domain-containing protein complement(3678436..3679254) Desulfotomaculum ruminis DSM 2154 10740049 YP_004547115.1 CDS Desru_3627 NC_015589.1 3679272 3680126 R PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: drm:Dred_3076 hypothetical protein; hypothetical protein complement(3679272..3680126) Desulfotomaculum ruminis DSM 2154 10740050 YP_004547116.1 CDS Desru_3628 NC_015589.1 3680307 3681414 R manually curated; KEGG: mcc:698629 G protein-coupled receptor 124; peptide chain release factor 2 complement(join(3680307..3681344,3681346..3681414)) Desulfotomaculum ruminis DSM 2154 10740051 YP_004547117.1 CDS Desru_3629 NC_015589.1 3681438 3684062 R KEGG: drm:Dred_3078 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; preprotein translocase subunit SecA complement(3681438..3684062) Desulfotomaculum ruminis DSM 2154 10740052 YP_004547118.1 CDS Desru_3630 NC_015589.1 3684269 3684790 R KEGG: drm:Dred_3079 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; ribosomal subunit interface protein complement(3684269..3684790) Desulfotomaculum ruminis DSM 2154 10740053 YP_004547119.1 CDS Desru_3631 NC_015589.1 3684933 3685130 R KEGG: drm:Dred_3080 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(3684933..3685130) Desulfotomaculum ruminis DSM 2154 10740054 YP_004547120.1 CDS Desru_3632 NC_015589.1 3685755 3686654 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: rrs:RoseRS_0589 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; diguanylate cyclase complement(3685755..3686654) Desulfotomaculum ruminis DSM 2154 10740055 YP_004547121.1 CDS Desru_3633 NC_015589.1 3686750 3687481 R KEGG: drm:Dred_3081 phosphoribosyltransferase; phosphoribosyltransferase complement(3686750..3687481) Desulfotomaculum ruminis DSM 2154 10740056 YP_004547122.1 CDS Desru_3634 NC_015589.1 3687812 3688030 R KEGG: drm:Dred_3084 hypothetical protein; hypothetical protein complement(3687812..3688030) Desulfotomaculum ruminis DSM 2154 10740057 YP_004547123.1 CDS Desru_3635 NC_015589.1 3688044 3688268 R PFAM: protein of unknown function DUF1659; KEGG: drm:Dred_3085 hypothetical protein; hypothetical protein complement(3688044..3688268) Desulfotomaculum ruminis DSM 2154 10740058 YP_004547124.1 CDS Desru_3636 NC_015589.1 3688460 3690142 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: drm:Dred_3086 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(3688460..3690142) Desulfotomaculum ruminis DSM 2154 10740059 YP_004547125.1 CDS Desru_3637 NC_015589.1 3690176 3690637 R KEGG: drm:Dred_3087 hypothetical protein; hypothetical protein complement(3690176..3690637) Desulfotomaculum ruminis DSM 2154 10740060 YP_004547126.1 CDS Desru_3638 NC_015589.1 3690778 3691542 R KEGG: drm:Dred_3094 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; ATP-binding protein complement(3690778..3691542) Desulfotomaculum ruminis DSM 2154 10740061 YP_004547127.1 CDS Desru_3639 NC_015589.1 3691691 3692182 D KEGG: drm:Dred_3095 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3691691..3692182 Desulfotomaculum ruminis DSM 2154 10740062 YP_004547128.1 CDS Desru_3640 NC_015589.1 3692231 3693424 R TIGRFAM: S-adenosylmethionine synthetase; KEGG: drm:Dred_3096 methionine adenosyltransferase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase complement(3692231..3693424) Desulfotomaculum ruminis DSM 2154 10740063 YP_004547129.1 CDS Desru_3641 NC_015589.1 3693694 3693954 R KEGG: drm:Dred_3097 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; YlmC/YmxH family sporulation protein complement(3693694..3693954) Desulfotomaculum ruminis DSM 2154 10740064 YP_004547130.1 CDS Desru_3642 NC_015589.1 3694014 3695585 R KEGG: drm:Dred_3098 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN complement(3694014..3695585) Desulfotomaculum ruminis DSM 2154 10740065 YP_004547131.1 CDS Desru_3643 NC_015589.1 3695790 3698840 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain-containing protein; KEGG: drm:Dred_3099 peptidase S8/S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin complement(3695790..3698840) Desulfotomaculum ruminis DSM 2154 10740066 YP_004547132.1 CDS Desru_3644 NC_015589.1 3698974 3700434 R KEGG: drm:Dred_3100 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase complement(3698974..3700434) Desulfotomaculum ruminis DSM 2154 10740067 YP_004547133.1 CDS Desru_3645 NC_015589.1 3700595 3700702 D hypothetical protein 3700595..3700702 Desulfotomaculum ruminis DSM 2154 10740068 YP_004547134.1 CDS Desru_3646 NC_015589.1 3700765 3701691 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ttm:Tthe_0924 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(3700765..3701691) Desulfotomaculum ruminis DSM 2154 10740069 YP_004547135.1 CDS Desru_3647 NC_015589.1 3701699 3702565 R KEGG: drm:Dred_3101 UTP-glucose-1-phosphate uridylyltransferase GalU; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase complement(3701699..3702565) Desulfotomaculum ruminis DSM 2154 10740070 YP_004547136.1 CDS Desru_3648 NC_015589.1 3702605 3703684 R PFAM: Glycosyl transferase, family 4, conserved region; KEGG: drm:Dred_3102 glycosyl transferase family protein; glycosyl transferase family protein complement(3702605..3703684) Desulfotomaculum ruminis DSM 2154 10740071 YP_004547137.1 CDS Desru_3649 NC_015589.1 3703871 3704299 R KEGG: drm:Dred_3103 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ complement(3703871..3704299) Desulfotomaculum ruminis DSM 2154 10740072 YP_004547138.1 CDS Desru_3650 NC_015589.1 3704629 3706302 D KEGG: drm:Dred_3104 hypothetical protein; hypothetical protein 3704629..3706302 Desulfotomaculum ruminis DSM 2154 10740073 YP_004547139.1 CDS Desru_3651 NC_015589.1 3706417 3707499 R KEGG: drm:Dred_3106 hypothetical protein; hypothetical protein complement(3706417..3707499) Desulfotomaculum ruminis DSM 2154 10740074 YP_004547140.1 CDS Desru_3652 NC_015589.1 3707486 3708652 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_3107 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein complement(3707486..3708652) Desulfotomaculum ruminis DSM 2154 10740075 YP_004547141.1 CDS Desru_3653 NC_015589.1 3708675 3709811 R TIGRFAM: polysaccharide pyruvyl transferase CsaB; KEGG: drm:Dred_3108 polysaccharide pyruvyl transferase; polysaccharide pyruvyl transferase CsaB complement(3708675..3709811) Desulfotomaculum ruminis DSM 2154 10740076 YP_004547142.1 CDS Desru_3654 NC_015589.1 3709804 3711744 R KEGG: drm:Dred_3109 hypothetical protein; hypothetical protein complement(3709804..3711744) Desulfotomaculum ruminis DSM 2154 10740077 YP_004547143.1 CDS Desru_3655 NC_015589.1 3711821 3713878 R PFAM: glucose-inhibited division protein A; KEGG: drm:Dred_3110 hypothetical protein; glucose-inhibited division protein A complement(3711821..3713878) Desulfotomaculum ruminis DSM 2154 10740078 YP_004547144.1 CDS Desru_3656 NC_015589.1 3713907 3715211 R KEGG: drm:Dred_3112 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; LytR/CpsA family cell envelope-related function transcriptional attenuator complement(3713907..3715211) Desulfotomaculum ruminis DSM 2154 10740079 YP_004547145.1 CDS Desru_3657 NC_015589.1 3715393 3716121 R TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: drm:Dred_3113 WecB/TagA/CpsF family glycosyl transferase; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(3715393..3716121) Desulfotomaculum ruminis DSM 2154 10740080 YP_004547146.1 CDS Desru_3658 NC_015589.1 3716317 3716628 R KEGG: dae:Dtox_0866 hypothetical protein; hypothetical protein complement(3716317..3716628) Desulfotomaculum ruminis DSM 2154 10740081 YP_004547147.1 CDS Desru_3659 NC_015589.1 3716615 3716905 R TIGRFAM: prevent-host-death family protein; KEGG: dae:Dtox_0867 prevent-host-death family protein; prevent-host-death family protein complement(3716615..3716905) Desulfotomaculum ruminis DSM 2154 10740082 YP_004547148.1 CDS Desru_3660 NC_015589.1 3717149 3718177 R PFAM: lipolytic protein G-D-S-L family; copper amine oxidase-like domain-containing protein; KEGG: clj:CLJU_c08400 putative SGNH hydrolase; G-D-S-L family lipolytic protein complement(3717149..3718177) Desulfotomaculum ruminis DSM 2154 10740083 YP_004547149.1 CDS Desru_3661 NC_015589.1 3718180 3719712 R KEGG: mta:Moth_2139 beta-mannanase-like; beta-mannanase-like protein complement(3718180..3719712) Desulfotomaculum ruminis DSM 2154 10740084 YP_004547150.1 CDS Desru_3662 NC_015589.1 3719936 3721522 R KEGG: dbr:Deba_2074 hypothetical protein; hypothetical protein complement(3719936..3721522) Desulfotomaculum ruminis DSM 2154 10740085 YP_004547151.1 CDS Desru_3663 NC_015589.1 3721618 3723021 R PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: dbr:Deba_2073 membrane bound O-acyl transferase MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein complement(3721618..3723021) Desulfotomaculum ruminis DSM 2154 10740086 YP_004547152.1 CDS Desru_3666 NC_015589.1 3725993 3726775 R PFAM: Methyltransferase type 11; KEGG: dae:Dtox_0855 methyltransferase type 11; type 11 methyltransferase complement(3725993..3726775) Desulfotomaculum ruminis DSM 2154 10740089 YP_004547153.1 CDS Desru_3667 NC_015589.1 3726779 3730819 R PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3802 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3726779..3730819) Desulfotomaculum ruminis DSM 2154 10740090 YP_004547154.1 CDS Desru_3668 NC_015589.1 3730816 3732432 R PFAM: Methyltransferase type 11; KEGG: mar:MAE_13200 putative methyltransferase; type 11 methyltransferase complement(3730816..3732432) Desulfotomaculum ruminis DSM 2154 10740091 YP_004547155.1 CDS Desru_3669 NC_015589.1 3732462 3733679 R KEGG: ecr:ECIAI1_2101 ATP binding component of ABC-transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3732462..3733679) Desulfotomaculum ruminis DSM 2154 10740092 YP_004547156.1 CDS Desru_3670 NC_015589.1 3733679 3734473 R KEGG: pap:PSPA7_6241 membrane subunit of A-band LPS efflux transporter; manually curated; PFAM: ABC-2 type transporter; ABC transporter complement(3733679..3734473) Desulfotomaculum ruminis DSM 2154 10740093 YP_004547157.1 CDS Desru_3671 NC_015589.1 3734559 3735731 R PFAM: glycosyl transferase group 1; KEGG: rpi:Rpic_1156 glycosyl transferase group 1; group 1 glycosyl transferase complement(3734559..3735731) Desulfotomaculum ruminis DSM 2154 10740094 YP_004547158.1 CDS Desru_3672 NC_015589.1 3735760 3737124 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: drm:Dred_3126 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I complement(3735760..3737124) Desulfotomaculum ruminis DSM 2154 10740095 YP_004547159.1 CDS Desru_3673 NC_015589.1 3737127 3738257 R PFAM: glycosyl transferase group 1; KEGG: thx:Thet_0654 glycosyl transferase group 1; group 1 glycosyl transferase complement(3737127..3738257) Desulfotomaculum ruminis DSM 2154 10740096 YP_004547160.1 CDS Desru_3674 NC_015589.1 3738281 3739702 R TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: hmo:HM1_1237 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(3738281..3739702) Desulfotomaculum ruminis DSM 2154 10740097 YP_004547161.1 CDS Desru_3675 NC_015589.1 3739757 3740707 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ttr:Tter_1710 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(3739757..3740707) Desulfotomaculum ruminis DSM 2154 10740098 YP_004547162.1 CDS Desru_3676 NC_015589.1 3740725 3741708 R KEGG: bbe:BBR47_17580 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase complement(3740725..3741708) Desulfotomaculum ruminis DSM 2154 10740099 YP_004547163.1 CDS Desru_3677 NC_015589.1 3741780 3743303 R TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(3741780..3743303) Desulfotomaculum ruminis DSM 2154 10740100 YP_004547164.1 CDS Desru_3678 NC_015589.1 3743320 3745638 R PFAM: O-antigen polymerase; KEGG: drm:Dred_3138 O-antigen polymerase; O-antigen polymerase complement(3743320..3745638) Desulfotomaculum ruminis DSM 2154 10740101 YP_004547165.1 CDS Desru_3679 NC_015589.1 3745861 3746412 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_2029 hypothetical protein; copper amine oxidase-like domain-containing protein complement(3745861..3746412) Desulfotomaculum ruminis DSM 2154 10740102 YP_004547166.1 CDS Desru_3680 NC_015589.1 3746640 3747740 R KEGG: dae:Dtox_4152 outer membrane protein-like protein; hypothetical protein complement(3746640..3747740) Desulfotomaculum ruminis DSM 2154 10740103 YP_004547167.1 CDS Desru_3681 NC_015589.1 3747824 3750148 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_4154 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein complement(3747824..3750148) Desulfotomaculum ruminis DSM 2154 10740104 YP_004547168.1 CDS Desru_3682 NC_015589.1 3750638 3751672 R KEGG: drm:Dred_3144 rod shape-determining protein Mbl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein complement(3750638..3751672) Desulfotomaculum ruminis DSM 2154 10740105 YP_004547169.1 CDS Desru_3683 NC_015589.1 3751956 3752207 R TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: drm:Dred_3145 regulatory protein, DeoR; sporulation transcriptional regulator SpoIIID complement(3751956..3752207) Desulfotomaculum ruminis DSM 2154 10740106 YP_004547170.1 CDS Desru_3684 NC_015589.1 3752471 3753166 R PFAM: Peptidase M23; KEGG: drm:Dred_3146 peptidase M23B; peptidase M23 complement(3752471..3753166) Desulfotomaculum ruminis DSM 2154 10740107 YP_004547171.1 CDS Desru_3685 NC_015589.1 3753445 3754413 R KEGG: drm:Dred_3147 SpoIID/LytB domain-containing protein; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D; stage II sporulation protein D complement(3753445..3754413) Desulfotomaculum ruminis DSM 2154 10740108 YP_004547172.1 CDS Desru_3686 NC_015589.1 3754548 3755822 R KEGG: drm:Dred_3148 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3754548..3755822) Desulfotomaculum ruminis DSM 2154 10740109 YP_004547173.1 CDS Desru_3687 NC_015589.1 3756111 3756509 R KEGG: drm:Dred_3149 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; ATP synthase F1 subunit epsilon complement(3756111..3756509) Desulfotomaculum ruminis DSM 2154 10740110 YP_004547174.1 CDS Desru_3688 NC_015589.1 3756512 3757930 R TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: drm:Dred_3150 F0F1 ATP synthase subunit beta; SMART: AAA ATPase; ATP synthase F1 subunit beta complement(3756512..3757930) Desulfotomaculum ruminis DSM 2154 10740111 YP_004547175.1 CDS Desru_3689 NC_015589.1 3757975 3758826 R KEGG: drm:Dred_3151 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma complement(3757975..3758826) Desulfotomaculum ruminis DSM 2154 10740112 YP_004547176.1 CDS Desru_3690 NC_015589.1 3758869 3760374 R KEGG: drm:Dred_3152 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha complement(3758869..3760374) Desulfotomaculum ruminis DSM 2154 10740113 YP_004547177.1 CDS Desru_3691 NC_015589.1 3760396 3760941 R KEGG: drm:Dred_3153 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta complement(3760396..3760941) Desulfotomaculum ruminis DSM 2154 10740114 YP_004547178.1 CDS Desru_3692 NC_015589.1 3760935 3761429 R KEGG: drm:Dred_3154 ATP synthase F0, B subunit; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B complement(3760935..3761429) Desulfotomaculum ruminis DSM 2154 10740115 YP_004547179.1 CDS Desru_3693 NC_015589.1 3761540 3761773 R KEGG: drm:Dred_3155 ATP synthase F0, C subunit; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; ATP synthase F0 subunit C complement(3761540..3761773) Desulfotomaculum ruminis DSM 2154 10740116 YP_004547180.1 CDS Desru_3694 NC_015589.1 3761813 3762604 R KEGG: drm:Dred_3156 ATP synthase F0, A subunit; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 subunit A complement(3761813..3762604) Desulfotomaculum ruminis DSM 2154 10740117 YP_004547181.1 CDS Desru_3695 NC_015589.1 3762601 3763059 R KEGG: drm:Dred_3157 hypothetical protein; hypothetical protein complement(3762601..3763059) Desulfotomaculum ruminis DSM 2154 10740118 YP_004547182.1 CDS Desru_3696 NC_015589.1 3763064 3763294 R KEGG: drm:Dred_3158 hypothetical protein; hypothetical protein complement(3763064..3763294) Desulfotomaculum ruminis DSM 2154 10740119 YP_004547183.1 CDS Desru_3697 NC_015589.1 3763512 3764666 R TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: drm:Dred_3159 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(3763512..3764666) Desulfotomaculum ruminis DSM 2154 10740120 YP_004547184.1 CDS Desru_3698 NC_015589.1 3764776 3765087 R PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: drm:Dred_3160 MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase complement(3764776..3765087) Desulfotomaculum ruminis DSM 2154 10740121 YP_004547185.1 CDS Desru_3699 NC_015589.1 3765137 3765586 R KEGG: drm:Dred_3161 CMP/dCMP deaminase, zinc-binding; PFAM: CMP/dCMP deaminase zinc-binding; dCMP deaminase complement(3765137..3765586) Desulfotomaculum ruminis DSM 2154 10740122 YP_004547186.1 CDS Desru_3700 NC_015589.1 3765787 3767025 R KEGG: drm:Dred_3162 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(3765787..3767025) Desulfotomaculum ruminis DSM 2154 10740123 YP_004547187.1 CDS Desru_3701 NC_015589.1 3767073 3767543 R TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: drm:Dred_3163 RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase complement(3767073..3767543) Desulfotomaculum ruminis DSM 2154 10740124 YP_004547188.1 CDS Desru_3702 NC_015589.1 3767646 3768101 R KEGG: drm:Dred_3164 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein-tyrosine phosphatase low molecular weight complement(3767646..3768101) Desulfotomaculum ruminis DSM 2154 10740125 YP_004547189.1 CDS Desru_3703 NC_015589.1 3768208 3768750 R PFAM: protein of unknown function DUF204; KEGG: drm:Dred_3165 hypothetical protein; hypothetical protein complement(3768208..3768750) Desulfotomaculum ruminis DSM 2154 10740126 YP_004547190.1 CDS Desru_3704 NC_015589.1 3768869 3769936 R KEGG: drm:Dred_3166 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein; Sua5/YciO/YrdC/YwlC family protein complement(3768869..3769936) Desulfotomaculum ruminis DSM 2154 10740127 YP_004547191.1 CDS Desru_3705 NC_015589.1 3770019 3770876 R KEGG: drm:Dred_3169 HemK family modification methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase release factor-specific complement(3770019..3770876) Desulfotomaculum ruminis DSM 2154 10740128 YP_004547192.1 CDS Desru_3706 NC_015589.1 3771058 3772128 R KEGG: drm:Dred_3170 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 complement(3771058..3772128) Desulfotomaculum ruminis DSM 2154 10740129 YP_004547193.1 CDS Desru_3707 NC_015589.1 3772118 3772999 R PFAM: protein of unknown function DUF1385; KEGG: drm:Dred_3171 hypothetical protein; hypothetical protein complement(3772118..3772999) Desulfotomaculum ruminis DSM 2154 10740130 YP_004547194.1 CDS Desru_3708 NC_015589.1 3773072 3773272 R KEGG: drm:Dred_3172 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(3773072..3773272) Desulfotomaculum ruminis DSM 2154 10740131 YP_004547195.1 CDS Desru_3709 NC_015589.1 3774458 3775384 R KEGG: drm:Dred_3173 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 complement(3774458..3775384) Desulfotomaculum ruminis DSM 2154 10740132 YP_004547196.1 CDS Desru_3710 NC_015589.1 3775468 3776811 R TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: drm:Dred_3174 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho complement(3775468..3776811) Desulfotomaculum ruminis DSM 2154 10740133 YP_004547197.1 CDS Desru_3711 NC_015589.1 3776857 3777375 R PFAM: Protein of unknown function DUF2062; KEGG: pth:PTH_2836 hypothetical protein; hypothetical protein complement(3776857..3777375) Desulfotomaculum ruminis DSM 2154 10740134 YP_004547198.1 CDS Desru_3712 NC_015589.1 3777710 3778363 R KEGG: drm:Dred_3175 putative transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase complement(3777710..3778363) Desulfotomaculum ruminis DSM 2154 10740135 YP_004547199.1 CDS Desru_3713 NC_015589.1 3778506 3779360 R TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: drm:Dred_3176 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-1,6-bisphosphate aldolase class II complement(3778506..3779360) Desulfotomaculum ruminis DSM 2154 10740136 YP_004547200.1 CDS Desru_3714 NC_015589.1 3779581 3780279 R KEGG: drm:Dred_3177 hypothetical protein; hypothetical protein complement(3779581..3780279) Desulfotomaculum ruminis DSM 2154 10740137 YP_004547201.1 CDS Desru_3715 NC_015589.1 3780365 3780775 R KEGG: drm:Dred_3178 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver complement(3780365..3780775) Desulfotomaculum ruminis DSM 2154 10740138 YP_004547202.1 CDS Desru_3716 NC_015589.1 3780899 3781714 R KEGG: drm:Dred_3179 hypothetical protein; hypothetical protein complement(3780899..3781714) Desulfotomaculum ruminis DSM 2154 10740139 YP_004547203.1 CDS Desru_3717 NC_015589.1 3781732 3782670 R KEGG: drm:Dred_3180 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA complement(3781732..3782670) Desulfotomaculum ruminis DSM 2154 10740140 YP_004547204.1 CDS Desru_3718 NC_015589.1 3783033 3784640 R TIGRFAM: CTP synthase; KEGG: drm:Dred_3181 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase complement(3783033..3784640) Desulfotomaculum ruminis DSM 2154 10740141 YP_004547205.1 CDS Desru_3719 NC_015589.1 3784719 3784883 R TIGRFAM: XapX domain protein; KEGG: drm:Dred_3182 hypothetical protein; XapX domain-containing protein complement(3784719..3784883) Desulfotomaculum ruminis DSM 2154 10740142 YP_004547206.1 CDS Desru_3720 NC_015589.1 3784895 3786580 R TIGRFAM: arginyl-tRNA synthetase; KEGG: drm:Dred_3183 arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(3784895..3786580) Desulfotomaculum ruminis DSM 2154 10740143 YP_004547207.1 CDS Desru_3721 NC_015589.1 3786616 3787059 R PFAM: Domain of unknown function DUF1934; KEGG: drm:Dred_3184 hypothetical protein; hypothetical protein complement(3786616..3787059) Desulfotomaculum ruminis DSM 2154 10740144 YP_004547208.1 CDS Desru_3722 NC_015589.1 3787137 3787352 R KEGG: drm:Dred_3185 putative dissimilatory sulfite reductase subunit D; putative dissimilatory sulfite reductase subunit D complement(3787137..3787352) Desulfotomaculum ruminis DSM 2154 10740145 YP_004547209.1 CDS Desru_3723 NC_015589.1 3787465 3788523 R TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; sulfite reductase dissimilatory-type subunit beta complement(3787465..3788523) Desulfotomaculum ruminis DSM 2154 10740146 YP_004547210.1 CDS Desru_3724 NC_015589.1 3788582 3789778 R TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: drm:Dred_3187 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; sulfite reductase dissimilatory-type subunit alpha complement(3788582..3789778) Desulfotomaculum ruminis DSM 2154 10740147 YP_004547211.1 CDS Desru_3725 NC_015589.1 3790418 3790993 R KEGG: drm:Dred_3188 indolepyruvate ferredoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Indolepyruvate ferredoxin oxidoreductase complement(3790418..3790993) Desulfotomaculum ruminis DSM 2154 10740148 YP_004547212.1 CDS Desru_3726 NC_015589.1 3790986 3792767 R KEGG: drm:Dred_3189 indolepyruvate ferredoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; indolepyruvate ferredoxin oxidoreductase subunit alpha complement(3790986..3792767) Desulfotomaculum ruminis DSM 2154 10740149 YP_004547213.1 CDS Desru_3727 NC_015589.1 3793057 3794352 R KEGG: drm:Dred_3190 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase complement(3793057..3794352) Desulfotomaculum ruminis DSM 2154 10740150 YP_004547214.1 CDS Desru_3728 NC_015589.1 3794349 3794450 R hypothetical protein complement(3794349..3794450) Desulfotomaculum ruminis DSM 2154 10740151 YP_004547215.1 CDS Desru_3729 NC_015589.1 3794658 3795830 R PFAM: aminotransferase class I and II; KEGG: drm:Dred_3192 aminotransferase, class I and II; class I and II aminotransferase complement(3794658..3795830) Desulfotomaculum ruminis DSM 2154 10740152 YP_004547216.1 CDS Desru_3730 NC_015589.1 3795827 3796306 R KEGG: drm:Dred_3193 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; transcriptional regulator AsnC-type-like protein complement(3795827..3796306) Desulfotomaculum ruminis DSM 2154 10740153 YP_004547217.1 CDS Desru_3731 NC_015589.1 3796661 3798019 R TIGRFAM: germination protein YpeB; KEGG: drm:Dred_3194 peptidase; germination protein YpeB complement(3796661..3798019) Desulfotomaculum ruminis DSM 2154 10740154 YP_004547218.1 CDS Desru_3732 NC_015589.1 3798039 3798734 R KEGG: drm:Dred_3195 cell wall hydrolase, SleB; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; spore cortex-lytic protein complement(3798039..3798734) Desulfotomaculum ruminis DSM 2154 10740155 YP_004547219.1 CDS Desru_3733 NC_015589.1 3798965 3800392 R KEGG: drm:Dred_3196 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid a,c-diamide synthase complement(3798965..3800392) Desulfotomaculum ruminis DSM 2154 10740156 YP_004547220.1 CDS Desru_3734 NC_015589.1 3800623 3800940 R TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; KEGG: drm:Dred_3197 DsrC family protein; PFAM: DsrC family protein; sulfur relay protein TusE/DsrC/DsvC family complement(3800623..3800940) Desulfotomaculum ruminis DSM 2154 10740157 YP_004547221.1 CDS Desru_3735 NC_015589.1 3801094 3802488 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_3198 hypothetical protein; hypothetical protein complement(3801094..3802488) Desulfotomaculum ruminis DSM 2154 10740158 YP_004547222.1 CDS Desru_3736 NC_015589.1 3802489 3803304 R PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_3199 nitrate reductase, gamma subunit; nitrate reductase subunit gamma complement(3802489..3803304) Desulfotomaculum ruminis DSM 2154 10740159 YP_004547223.1 CDS Desru_3737 NC_015589.1 3803442 3803630 R KEGG: drm:Dred_3200 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(3803442..3803630) Desulfotomaculum ruminis DSM 2154 10740160 YP_004547224.1 CDS Desru_3738 NC_015589.1 3804112 3804531 D KEGG: drm:Dred_3201 hypothetical protein; hypothetical protein 3804112..3804531 Desulfotomaculum ruminis DSM 2154 10740161 YP_004547225.1 CDS Desru_3739 NC_015589.1 3804552 3805619 R TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: sth:STH1727 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase complement(3804552..3805619) Desulfotomaculum ruminis DSM 2154 10740162 YP_004547226.1 CDS Desru_3740 NC_015589.1 3805622 3806857 R KEGG: cno:NT01CX_0942 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; competence/damage-inducible protein CinA complement(3805622..3806857) Desulfotomaculum ruminis DSM 2154 10740163 YP_004547227.1 CDS Desru_3741 NC_015589.1 3807223 3808338 R PFAM: peptidase M29 aminopeptidase II; KEGG: drm:Dred_3214 putative aminopeptidase; peptidase M29 aminopeptidase II complement(3807223..3808338) Desulfotomaculum ruminis DSM 2154 10740164 YP_004547228.1 CDS Desru_3742 NC_015589.1 3808435 3809625 R KEGG: bbe:BBR47_22460 ornithine aminotransferase; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; ornithine aminotransferase complement(3808435..3809625) Desulfotomaculum ruminis DSM 2154 10740165 YP_004547229.1 CDS Desru_3743 NC_015589.1 3809922 3810476 R KEGG: tpe:Tpen_1757 hypothetical protein; hypothetical protein complement(3809922..3810476) Desulfotomaculum ruminis DSM 2154 10740166 YP_004547230.1 CDS Desru_3744 NC_015589.1 3810893 3811030 R hypothetical protein complement(3810893..3811030) Desulfotomaculum ruminis DSM 2154 10740167 YP_004547231.1 CDS Desru_3745 NC_015589.1 3811682 3812359 R KEGG: cyb:CYB_0114 segregation and condensation protein B; hypothetical protein complement(3811682..3812359) Desulfotomaculum ruminis DSM 2154 10740168 YP_004547232.1 CDS Desru_3746 NC_015589.1 3812411 3813394 R PFAM: RNA binding S1 domain protein; KEGG: xal:XALc_1602 30S ribosomal protein S1; RNA binding S1 domain-containing protein complement(3812411..3813394) Desulfotomaculum ruminis DSM 2154 10740169 YP_004547233.1 CDS Desru_3747 NC_015589.1 3813415 3814470 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: tte:TTE2081 transcriptional regulator; SMART: ParB domain protein nuclease; parB-like partition protein complement(3813415..3814470) Desulfotomaculum ruminis DSM 2154 10740170 YP_004547234.1 CDS Desru_3748 NC_015589.1 3814467 3815363 R KEGG: dau:Daud_0815 TraG family protein; hypothetical protein complement(3814467..3815363) Desulfotomaculum ruminis DSM 2154 10740171 YP_004547235.1 CDS Desru_3749 NC_015589.1 3815476 3817449 R PFAM: TRAG family protein; KEGG: adg:Adeg_0821 TraG family protein; TRAG family protein complement(3815476..3817449) Desulfotomaculum ruminis DSM 2154 10740172 YP_004547236.1 CDS Desru_3750 NC_015589.1 3817772 3818368 R KEGG: dae:Dtox_2470 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain-containing protein complement(3817772..3818368) Desulfotomaculum ruminis DSM 2154 10740173 YP_004547237.1 CDS Desru_3751 NC_015589.1 3818446 3819516 R KEGG: tmt:Tmath_0071 StbA family protein; StbA family protein complement(3818446..3819516) Desulfotomaculum ruminis DSM 2154 10740174 YP_004547238.1 CDS Desru_3752 NC_015589.1 3819840 3820727 R PFAM: VanW family protein; KEGG: mta:Moth_0694 copper amine oxidase-like; VanW family protein complement(3819840..3820727) Desulfotomaculum ruminis DSM 2154 10740175 YP_004547239.1 CDS Desru_3753 NC_015589.1 3820800 3822455 R KEGG: drm:Dred_0966 hypothetical protein; hypothetical protein complement(3820800..3822455) Desulfotomaculum ruminis DSM 2154 10740176 YP_004547240.1 CDS Desru_3754 NC_015589.1 3822466 3823221 R KEGG: drm:Dred_0965 hypothetical protein; hypothetical protein complement(3822466..3823221) Desulfotomaculum ruminis DSM 2154 10740177 YP_004547241.1 CDS Desru_3755 NC_015589.1 3823276 3824877 R KEGG: drm:Dred_0969 hypothetical protein; hypothetical protein complement(3823276..3824877) Desulfotomaculum ruminis DSM 2154 10740178 YP_004547242.1 CDS Desru_3756 NC_015589.1 3825092 3826123 D KEGG: saq:Sare_3343 hypothetical protein; hypothetical protein 3825092..3826123 Desulfotomaculum ruminis DSM 2154 10740179 YP_004547243.1 CDS Desru_3757 NC_015589.1 3826355 3827194 R KEGG: gme:Gmet_2469 fibronectin, type III; hypothetical protein complement(3826355..3827194) Desulfotomaculum ruminis DSM 2154 10740180 YP_004547244.1 CDS Desru_3758 NC_015589.1 3827428 3828687 D KEGG: drm:Dred_0968 hypothetical protein; hypothetical protein 3827428..3828687 Desulfotomaculum ruminis DSM 2154 10740181 YP_004547245.1 CDS Desru_3759 NC_015589.1 3828720 3829688 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_0967 phage integrase family protein; integrase family protein complement(3828720..3829688) Desulfotomaculum ruminis DSM 2154 10740182 YP_004547246.1 CDS Desru_3760 NC_015589.1 3829761 3829871 R hypothetical protein complement(3829761..3829871) Desulfotomaculum ruminis DSM 2154 10740183 YP_004547247.1 CDS Desru_3761 NC_015589.1 3829875 3830597 R PFAM: glycosyl transferase family 2; KEGG: mbn:Mboo_1769 glycosyl transferase family protein; family 2 glycosyl transferase complement(3829875..3830597) Desulfotomaculum ruminis DSM 2154 10740184 YP_004547248.1 CDS Desru_3762 NC_015589.1 3830674 3831003 R KEGG: dae:Dtox_2477 hypothetical protein; hypothetical protein complement(3830674..3831003) Desulfotomaculum ruminis DSM 2154 10740185 YP_004547249.1 CDS Desru_3763 NC_015589.1 3831048 3832544 R KEGG: dae:Dtox_2478 hypothetical protein; hypothetical protein complement(3831048..3832544) Desulfotomaculum ruminis DSM 2154 10740186 YP_004547250.1 CDS Desru_3764 NC_015589.1 3832638 3833042 R PFAM: TadE family protein; KEGG: dae:Dtox_2479 TadE family protein; TadE family protein complement(3832638..3833042) Desulfotomaculum ruminis DSM 2154 10740187 YP_004547251.1 CDS Desru_3765 NC_015589.1 3833039 3833539 R PFAM: peptidase A24A prepilin type IV; KEGG: dae:Dtox_2480 peptidase A24A prepilin type IV; peptidase A24A prepilin type IV complement(3833039..3833539) Desulfotomaculum ruminis DSM 2154 10740188 YP_004547252.1 CDS Desru_3766 NC_015589.1 3833554 3833745 R KEGG: dae:Dtox_2482 hypothetical protein; hypothetical protein complement(3833554..3833745) Desulfotomaculum ruminis DSM 2154 10740189 YP_004547253.1 CDS Desru_3767 NC_015589.1 3833785 3833931 R KEGG: dae:Dtox_2485 hypothetical protein; hypothetical protein complement(3833785..3833931) Desulfotomaculum ruminis DSM 2154 10740190 YP_004547254.1 CDS Desru_3768 NC_015589.1 3833953 3834825 R PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2486 type II secretion system protein; type II secretion system F domain-containing protein complement(3833953..3834825) Desulfotomaculum ruminis DSM 2154 10740191 YP_004547255.1 CDS Desru_3769 NC_015589.1 3834841 3835764 R PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2487 type II secretion system protein; type II secretion system F domain-containing protein complement(3834841..3835764) Desulfotomaculum ruminis DSM 2154 10740192 YP_004547256.1 CDS Desru_3770 NC_015589.1 3835764 3837134 R PFAM: type II secretion system protein E; KEGG: dae:Dtox_2488 type II secretion system protein E; type II secretion system protein E complement(3835764..3837134) Desulfotomaculum ruminis DSM 2154 10740193 YP_004547257.1 CDS Desru_3771 NC_015589.1 3837135 3838403 R KEGG: dae:Dtox_2490 septum formation inhibitor-activating ATPase-like protein; septum formation inhibitor-activating ATPase-like protein complement(3837135..3838403) Desulfotomaculum ruminis DSM 2154 10740194 YP_004547258.1 CDS Desru_3772 NC_015589.1 3838405 3839166 R KEGG: dae:Dtox_2491 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; Flp pilus assembly protein CpaB complement(3838405..3839166) Desulfotomaculum ruminis DSM 2154 10740195 YP_004547259.1 CDS Desru_3773 NC_015589.1 3839171 3839620 R KEGG: dae:Dtox_2492 hypothetical protein; hypothetical protein complement(3839171..3839620) Desulfotomaculum ruminis DSM 2154 10740196 YP_004547260.1 CDS Desru_3774 NC_015589.1 3839826 3840314 R KEGG: dae:Dtox_2493 hypothetical protein; hypothetical protein complement(3839826..3840314) Desulfotomaculum ruminis DSM 2154 10740197 YP_004547261.1 CDS Desru_3775 NC_015589.1 3840398 3842239 R KEGG: drm:Dred_2787 hypothetical protein; hypothetical protein complement(3840398..3842239) Desulfotomaculum ruminis DSM 2154 10740198 YP_004547262.1 CDS Desru_3776 NC_015589.1 3842243 3843133 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_0168 hypothetical protein; copper amine oxidase-like domain-containing protein complement(3842243..3843133) Desulfotomaculum ruminis DSM 2154 10740199 YP_004547263.1 CDS Desru_3777 NC_015589.1 3843184 3844290 R PFAM: filamentation induced by cAMP protein Fic; KEGG: drm:Dred_0937 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic complement(3843184..3844290) Desulfotomaculum ruminis DSM 2154 10740200 YP_004547264.1 CDS Desru_3778 NC_015589.1 3844563 3846401 R KEGG: drm:Dred_2787 hypothetical protein; hypothetical protein complement(3844563..3846401) Desulfotomaculum ruminis DSM 2154 10740201 YP_004547265.1 CDS Desru_3779 NC_015589.1 3846401 3847294 R PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_0939 copper amine oxidase domain-containing protein; copper amine oxidase-like domain-containing protein complement(3846401..3847294) Desulfotomaculum ruminis DSM 2154 10740202 YP_004547266.1 CDS Desru_3780 NC_015589.1 3847291 3847512 R PFAM: SpoVT/AbrB domain-containing protein; KEGG: sru:SRU_0234 transcriptional regulator, AbrB family protein; SpoVT/AbrB domain-containing protein complement(3847291..3847512) Desulfotomaculum ruminis DSM 2154 10740203 YP_004547267.1 CDS Desru_3781 NC_015589.1 3847627 3847884 R KEGG: mta:Moth_1940 hypothetical protein; hypothetical protein complement(3847627..3847884) Desulfotomaculum ruminis DSM 2154 10740204 YP_004547268.1 CDS Desru_3782 NC_015589.1 3847859 3848167 R KEGG: mta:Moth_1941 hypothetical protein; hypothetical protein complement(3847859..3848167) Desulfotomaculum ruminis DSM 2154 10740205 YP_004547269.1 CDS Desru_3783 NC_015589.1 3848355 3848762 R KEGG: dae:Dtox_2498 PilT protein domain protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; PilT protein domain-containing protein complement(3848355..3848762) Desulfotomaculum ruminis DSM 2154 10740206 YP_004547270.1 CDS Desru_3784 NC_015589.1 3848762 3849016 R KEGG: dae:Dtox_2499 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; AbrB family transcriptional regulator complement(3848762..3849016) Desulfotomaculum ruminis DSM 2154 10740207 YP_004547271.1 CDS Desru_3785 NC_015589.1 3849092 3849202 R KEGG: nca:Noca_3116 type II secretion system protein E; type II secretion system protein E complement(3849092..3849202) Desulfotomaculum ruminis DSM 2154 10740208 YP_004547272.1 CDS Desru_3786 NC_015589.1 3849536 3850369 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_035 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3849536..3850369) Desulfotomaculum ruminis DSM 2154 10740209 YP_004547273.1 CDS Desru_3787 NC_015589.1 3850381 3852162 R KEGG: dae:Dtox_2503 chromosome partitioning ATPase-like protein; chromosome partitioning ATPase-like protein complement(3850381..3852162) Desulfotomaculum ruminis DSM 2154 10740210 YP_004547274.1 CDS Desru_3788 NC_015589.1 3852217 3853980 R PFAM: Peptidase M23; Lytic transglycosylase catalytic; KEGG: drm:Dred_0935 peptidase M23B; peptidase M23 complement(3852217..3853980) Desulfotomaculum ruminis DSM 2154 10740211 YP_004547275.1 CDS Desru_3789 NC_015589.1 3854110 3855105 R KEGG: drm:Dred_0934 hypothetical protein; hypothetical protein complement(3854110..3855105) Desulfotomaculum ruminis DSM 2154 10740212 YP_004547276.1 CDS Desru_3790 NC_015589.1 3855118 3856590 R KEGG: drm:Dred_0933 hypothetical protein; hypothetical protein complement(3855118..3856590) Desulfotomaculum ruminis DSM 2154 10740213 YP_004547277.1 CDS Desru_3791 NC_015589.1 3856599 3858443 R KEGG: drm:Dred_0931 hypothetical protein; hypothetical protein complement(3856599..3858443) Desulfotomaculum ruminis DSM 2154 10740214 YP_004547278.1 CDS Desru_3792 NC_015589.1 3858445 3859209 R KEGG: drm:Dred_0930 hypothetical protein; hypothetical protein complement(3858445..3859209) Desulfotomaculum ruminis DSM 2154 10740215 YP_004547279.1 CDS Desru_3793 NC_015589.1 3859209 3859559 R KEGG: drm:Dred_0928 hypothetical protein; hypothetical protein complement(3859209..3859559) Desulfotomaculum ruminis DSM 2154 10740216 YP_004547280.1 CDS Desru_3794 NC_015589.1 3859619 3859978 R KEGG: drm:Dred_0927 hypothetical protein; hypothetical protein complement(3859619..3859978) Desulfotomaculum ruminis DSM 2154 10740217 YP_004547281.1 CDS Desru_3795 NC_015589.1 3859994 3860365 R KEGG: drm:Dred_0926 hypothetical protein; hypothetical protein complement(3859994..3860365) Desulfotomaculum ruminis DSM 2154 10740218 YP_004547282.1 CDS Desru_3796 NC_015589.1 3860378 3860602 R KEGG: mse:Msed_1376 binding-protein-dependent transport systems inner membrane component; hypothetical protein complement(3860378..3860602) Desulfotomaculum ruminis DSM 2154 10740219 YP_004547283.1 CDS Desru_3797 NC_015589.1 3860843 3861001 R KEGG: bcy:Bcer98_1772 hypothetical protein; hypothetical protein complement(3860843..3861001) Desulfotomaculum ruminis DSM 2154 10740220 YP_004547284.1 CDS Desru_3798 NC_015589.1 3861017 3861619 R KEGG: hmg:100211454 similar to predicted protein; hypothetical protein complement(3861017..3861619) Desulfotomaculum ruminis DSM 2154 10740221 YP_004547285.1 CDS Desru_3799 NC_015589.1 3861844 3862086 R KEGG: mta:Moth_0301 hypothetical protein; hypothetical protein complement(3861844..3862086) Desulfotomaculum ruminis DSM 2154 10740222 YP_004547286.1 CDS Desru_3800 NC_015589.1 3862343 3862723 D KEGG: mta:Moth_0300 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3862343..3862723 Desulfotomaculum ruminis DSM 2154 10740223 YP_004547287.1 CDS Desru_3801 NC_015589.1 3862818 3863255 R PFAM: protein of unknown function DUF955; KEGG: dtu:Dtur_1293 protein of unknown function DUF955; hypothetical protein complement(3862818..3863255) Desulfotomaculum ruminis DSM 2154 10740224 YP_004547288.1 CDS Desru_3802 NC_015589.1 3863417 3864118 D KEGG: nth:Nther_1924 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; response regulator receiver 3863417..3864118 Desulfotomaculum ruminis DSM 2154 10740225 YP_004547289.1 CDS Desru_3803 NC_015589.1 3864472 3865221 D KEGG: hmo:HM1_0387 hypothetical protein; hypothetical protein 3864472..3865221 Desulfotomaculum ruminis DSM 2154 10740226 YP_004547290.1 CDS Desru_3804 NC_015589.1 3865425 3865997 D PFAM: regulatory protein TetR; KEGG: dae:Dtox_3827 transcriptional regulator, TetR family; regulatory protein TetR 3865425..3865997 Desulfotomaculum ruminis DSM 2154 10740227 YP_004547291.1 CDS Desru_3805 NC_015589.1 3866060 3866746 D PFAM: alpha/beta hydrolase fold; KEGG: dae:Dtox_3824 esterase/lipase-like protein; alpha/beta hydrolase fold protein 3866060..3866746 Desulfotomaculum ruminis DSM 2154 10740228 YP_004547292.1 CDS Desru_3806 NC_015589.1 3866804 3868240 R PFAM: HI0933 family protein; KEGG: drm:Dred_1583 glucose-inhibited division protein A; hypothetical protein complement(3866804..3868240) Desulfotomaculum ruminis DSM 2154 10740229 YP_004547293.1 CDS Desru_3807 NC_015589.1 3868471 3869124 R KEGG: drm:Dred_3215 hypothetical protein; hypothetical protein complement(3868471..3869124) Desulfotomaculum ruminis DSM 2154 10740230 YP_004547294.1 CDS Desru_3808 NC_015589.1 3869253 3869897 D PFAM: Coat F domain protein; KEGG: hmo:HM1_1940 conserved hypothetical protein, possible spore coat protein, cotf; Coat F domain-containing protein 3869253..3869897 Desulfotomaculum ruminis DSM 2154 10740231 YP_004547295.1 CDS Desru_3809 NC_015589.1 3870174 3870902 R PFAM: protein of unknown function UPF0153; KEGG: dev:DhcVS_1385 reductive dehalogenase associated protein; hypothetical protein complement(3870174..3870902) Desulfotomaculum ruminis DSM 2154 10740232 YP_004547296.1 CDS Desru_3810 NC_015589.1 3871093 3871992 D KEGG: dhd:Dhaf_0755 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; arginase 3871093..3871992 Desulfotomaculum ruminis DSM 2154 10740233 YP_004547297.1 CDS Desru_3811 NC_015589.1 3871997 3872710 R KEGG: drm:Dred_0629 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(3871997..3872710) Desulfotomaculum ruminis DSM 2154 10740234 YP_004547298.1 CDS Desru_3812 NC_015589.1 3872940 3873377 R TIGRFAM: methionine-R-sulfoxide reductase; KEGG: rci:LRC347 peptide methionine sulfoxide reductase subunit B; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(3872940..3873377) Desulfotomaculum ruminis DSM 2154 10740235 YP_004547299.1 CDS Desru_3813 NC_015589.1 3873356 3873913 R TIGRFAM: peptide methionine sulfoxide reductase; KEGG: dae:Dtox_0373 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(3873356..3873913) Desulfotomaculum ruminis DSM 2154 10740236 YP_004547300.1 CDS Desru_3814 NC_015589.1 3874004 3876526 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: dae:Dtox_0767 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein; diguanylate cyclase complement(3874004..3876526) Desulfotomaculum ruminis DSM 2154 10740237 YP_004547301.1 CDS Desru_3815 NC_015589.1 3876725 3877954 D PFAM: protein of unknown function DUF401; KEGG: gsu:GSU1012 hypothetical protein; hypothetical protein 3876725..3877954 Desulfotomaculum ruminis DSM 2154 10740238 YP_004547302.1 CDS Desru_3816 NC_015589.1 3878127 3879842 R KEGG: drm:Dred_2745 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; Na/Pi-cotransporter II-like protein complement(3878127..3879842) Desulfotomaculum ruminis DSM 2154 10740239 YP_004547303.1 CDS Desru_3817 NC_015589.1 3880070 3882265 R TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; KEGG: drm:Dred_3223 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase III complement(3880070..3882265) Desulfotomaculum ruminis DSM 2154 10740240 YP_004547304.1 CDS Desru_3818 NC_015589.1 3882469 3883830 D PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: cbe:Cbei_3496 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 3882469..3883830 Desulfotomaculum ruminis DSM 2154 10740241 YP_004547305.1 CDS Desru_3819 NC_015589.1 3883843 3884772 R KEGG: bcz:BCZK1642 tagatose-6-phosphate kinase, phosphofructokinase I; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase complement(3883843..3884772) Desulfotomaculum ruminis DSM 2154 10740242 YP_004547306.1 CDS Desru_3820 NC_015589.1 3884812 3885666 R TIGRFAM: ketose-bisphosphate aldolase; KEGG: str:Sterm_1967 ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; ketose-bisphosphate aldolase complement(3884812..3885666) Desulfotomaculum ruminis DSM 2154 10740243 YP_004547307.1 CDS Desru_3821 NC_015589.1 3885657 3886613 R PFAM: PfkB domain protein; KEGG: hor:Hore_22680 PfkB domain protein; PfkB domain-containing protein complement(3885657..3886613) Desulfotomaculum ruminis DSM 2154 10740244 YP_004547308.1 CDS Desru_3822 NC_015589.1 3886624 3887610 R PFAM: inner-membrane translocator; KEGG: hor:Hore_22690 monosaccharide-transporting ATPase; inner-membrane translocator complement(3886624..3887610) Desulfotomaculum ruminis DSM 2154 10740245 YP_004547309.1 CDS Desru_3823 NC_015589.1 3887613 3889106 R KEGG: str:Sterm_3540 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3887613..3889106) Desulfotomaculum ruminis DSM 2154 10740246 YP_004547310.1 CDS Desru_3824 NC_015589.1 3889196 3890146 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: str:Sterm_3541 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(3889196..3890146) Desulfotomaculum ruminis DSM 2154 10740247 YP_004547311.1 CDS Desru_3825 NC_015589.1 3890295 3891296 R KEGG: str:Sterm_3542 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; regulatory protein LacI complement(3890295..3891296) Desulfotomaculum ruminis DSM 2154 10740248 YP_004547312.1 CDS Desru_3826 NC_015589.1 3891489 3891860 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aoe:Clos_2355 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(3891489..3891860) Desulfotomaculum ruminis DSM 2154 10740249 YP_004547313.1 CDS Desru_3827 NC_015589.1 3891916 3892452 R KEGG: dsy:DSY4988 hypothetical protein; hypothetical protein complement(3891916..3892452) Desulfotomaculum ruminis DSM 2154 10740250 YP_004547314.1 CDS Desru_3828 NC_015589.1 3892565 3893659 R TIGRFAM: diguanylate cyclase; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; GGDEF domain containing protein; KEGG: vvy:VV0692 putative regulator of cell autolysis; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3892565..3893659) Desulfotomaculum ruminis DSM 2154 10740251 YP_004547315.1 CDS Desru_3829 NC_015589.1 3893646 3894704 R KEGG: bbe:BBR47_29850 probable transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; regulatory protein LuxR complement(3893646..3894704) Desulfotomaculum ruminis DSM 2154 10740252 YP_004547316.1 CDS Desru_3830 NC_015589.1 3894717 3895400 R PFAM: Integral membrane protein TerC; KEGG: bbe:BBR47_11800 hypothetical protein; integral membrane protein TerC complement(3894717..3895400) Desulfotomaculum ruminis DSM 2154 10740253 YP_004547317.1 CDS Desru_3831 NC_015589.1 3895489 3897000 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: oca:OCAR_6740 integral membrane protein; hypothetical protein complement(3895489..3897000) Desulfotomaculum ruminis DSM 2154 10740254 YP_004547318.1 CDS Desru_3832 NC_015589.1 3897712 3898686 D KEGG: oca:OCAR_6742 hypothetical protein; hypothetical protein 3897712..3898686 Desulfotomaculum ruminis DSM 2154 10740255 YP_004547319.1 CDS Desru_3833 NC_015589.1 3898710 3899261 D KEGG: mch:Mchl_4220 hypothetical protein; hypothetical protein 3898710..3899261 Desulfotomaculum ruminis DSM 2154 10740256 YP_004547320.1 CDS Desru_3834 NC_015589.1 3899310 3901049 D KEGG: dhd:Dhaf_4634 sulfoacetaldehyde acetyltransferase; TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; sulfoacetaldehyde acetyltransferase 3899310..3901049 Desulfotomaculum ruminis DSM 2154 10740257 YP_004547321.1 CDS Desru_3835 NC_015589.1 3901078 3902496 D KEGG: dhd:Dhaf_0190 hypothetical protein; hypothetical protein 3901078..3902496 Desulfotomaculum ruminis DSM 2154 10740258 YP_004547322.1 CDS Desru_3836 NC_015589.1 3902513 3903631 D KEGG: dhd:Dhaf_0191 succinate--CoA ligase (ADP-forming); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinate--CoA ligase 3902513..3903631 Desulfotomaculum ruminis DSM 2154 10740259 YP_004547323.1 CDS Desru_3837 NC_015589.1 3903628 3904527 D KEGG: dhd:Dhaf_0192 CoA-binding domain protein; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinate--CoA ligase 3903628..3904527 Desulfotomaculum ruminis DSM 2154 10740260 YP_004547324.1 CDS Desru_3838 NC_015589.1 3904811 3905278 D PFAM: transcription factor CarD; KEGG: drm:Dred_3244 CarD family transcriptional regulator; transcription factor CarD 3904811..3905278 Desulfotomaculum ruminis DSM 2154 10740261 YP_004547325.1 CDS Desru_3839 NC_015589.1 3905368 3905568 R KEGG: drm:Dred_3245 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(3905368..3905568) Desulfotomaculum ruminis DSM 2154 10740262 YP_004547326.1 CDS Desru_3840 NC_015589.1 3906030 3908237 R KEGG: bha:BH1154 hypothetical protein; PFAM: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain-containing protein complement(3906030..3908237) Desulfotomaculum ruminis DSM 2154 10740263 YP_004547327.1 CDS Desru_3841 NC_015589.1 3908215 3908907 R KEGG: bmd:BMD_5228 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; response regulator receiver complement(3908215..3908907) Desulfotomaculum ruminis DSM 2154 10740264 YP_004547328.1 CDS Desru_3842 NC_015589.1 3909193 3910197 R PFAM: chemotaxis sensory transducer; Cache domain protein; KEGG: dhd:Dhaf_1064 methyl-accepting chemotaxis sensory transducer with cache sensor; chemotaxis sensory transducer protein complement(3909193..3910197) Desulfotomaculum ruminis DSM 2154 10740265 YP_004547329.1 CDS Desru_3843 NC_015589.1 3910337 3911647 R KEGG: bbe:BBR47_48290 hypothetical protein; hypothetical protein complement(3910337..3911647) Desulfotomaculum ruminis DSM 2154 10740266 YP_004547330.1 CDS Desru_3844 NC_015589.1 3911922 3913925 R KEGG: drm:Dred_3241 hypothetical protein; hypothetical protein complement(3911922..3913925) Desulfotomaculum ruminis DSM 2154 10740267 YP_004547331.1 CDS Desru_3845 NC_015589.1 3913900 3914799 R KEGG: drm:Dred_3242 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3913900..3914799) Desulfotomaculum ruminis DSM 2154 10740268 YP_004547332.1 CDS Desru_3846 NC_015589.1 3914792 3915181 R KEGG: drm:Dred_3243 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; regulatory protein GntR complement(3914792..3915181) Desulfotomaculum ruminis DSM 2154 10740269 YP_004547333.1 CDS Desru_3847 NC_015589.1 3915391 3916695 R KEGG: dhd:Dhaf_3597 hypothetical protein; hypothetical protein complement(3915391..3916695) Desulfotomaculum ruminis DSM 2154 10740270 YP_004547334.1 CDS Desru_3848 NC_015589.1 3916682 3917206 R KEGG: amt:Amet_4250 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 family RNA polymerase sigma factor complement(3916682..3917206) Desulfotomaculum ruminis DSM 2154 10740271 YP_004547335.1 CDS Desru_3849 NC_015589.1 3917405 3918208 R PFAM: nitroreductase; KEGG: mpl:Mpal_1484 nitroreductase; nitroreductase complement(3917405..3918208) Desulfotomaculum ruminis DSM 2154 10740272 YP_004547336.1 CDS Desru_3850 NC_015589.1 3918230 3918883 R PFAM: NADPH-dependent FMN reductase; KEGG: mac:MA1860 iron-sulfur flavoprotein; NADPH-dependent FMN reductase complement(3918230..3918883) Desulfotomaculum ruminis DSM 2154 10740273 YP_004547337.1 CDS Desru_3851 NC_015589.1 3919002 3919340 D KEGG: cwo:Cwoe_4680 transcriptional regulator, HxlR family; manually curated; PFAM: helix-turn-helix HxlR type; helix-turn-helix HxlR type 3919002..3919340 Desulfotomaculum ruminis DSM 2154 10740274 YP_004547338.1 CDS Desru_3852 NC_015589.1 3919394 3920170 R KEGG: dhd:Dhaf_2626 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein complement(3919394..3920170) Desulfotomaculum ruminis DSM 2154 10740275 YP_004547339.1 CDS Desru_3853 NC_015589.1 3920273 3921604 R PFAM: L-fucose isomerase-like-like; KEGG: bmq:BMQ_3645 hypothetical protein; L-fucose isomerase-like protein complement(3920273..3921604) Desulfotomaculum ruminis DSM 2154 10740276 YP_004547340.1 CDS Desru_3854 NC_015589.1 3921834 3922682 D TIGRFAM: ketose-bisphosphate aldolase; KEGG: dsy:DSY1493 hypothetical protein; PFAM: ketose-bisphosphate aldolase class-II; thiamine monophosphate synthase; ketose-bisphosphate aldolase 3921834..3922682 Desulfotomaculum ruminis DSM 2154 10740277 YP_004547341.1 CDS Desru_3855 NC_015589.1 3922679 3923704 R PFAM: oxidoreductase domain protein; KEGG: cma:Cmaq_1495 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein complement(3922679..3923704) Desulfotomaculum ruminis DSM 2154 10740278 YP_004547342.1 CDS Desru_3856 NC_015589.1 3923774 3924622 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_2632 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3923774..3924622) Desulfotomaculum ruminis DSM 2154 10740279 YP_004547343.1 CDS Desru_3857 NC_015589.1 3924635 3925561 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_2631 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3924635..3925561) Desulfotomaculum ruminis DSM 2154 10740280 YP_004547344.1 CDS Desru_3858 NC_015589.1 3925551 3926867 R PFAM: extracellular solute-binding protein family 1; KEGG: dhd:Dhaf_2627 extracellular solute-binding protein family 1; family 1 extracellular solute-binding protein complement(3925551..3926867) Desulfotomaculum ruminis DSM 2154 10740281 YP_004547345.1 CDS Desru_3859 NC_015589.1 3926959 3928062 R KEGG: dsy:DSY1498 hypothetical protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter-like protein complement(3926959..3928062) Desulfotomaculum ruminis DSM 2154 10740282 YP_004547346.1 CDS Desru_3860 NC_015589.1 3928229 3929323 R KEGG: ecq:ECED1_3908 hypothetical protein; hypothetical protein complement(3928229..3929323) Desulfotomaculum ruminis DSM 2154 10740283 YP_004547347.1 CDS Desru_3861 NC_015589.1 3929686 3930840 D PFAM: phosphofructokinase; KEGG: caa:Caka_2312 phosphofructokinase; phosphofructokinase 3929686..3930840 Desulfotomaculum ruminis DSM 2154 10740284 YP_004547348.1 CDS Desru_3862 NC_015589.1 3931213 3932616 D PFAM: Na+/H+ antiporter NhaC-like; KEGG: nth:Nther_2723 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC-like protein 3931213..3932616 Desulfotomaculum ruminis DSM 2154 10740285 YP_004547349.1 CDS Desru_3863 NC_015589.1 3932679 3933011 R KEGG: bld:BLi02184 CsaA; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain-containing protein; export-related chaperone CsaA complement(3932679..3933011) Desulfotomaculum ruminis DSM 2154 10740286 YP_004547350.1 CDS Desru_3864 NC_015589.1 3933187 3934080 D KEGG: gym:GYMC10_3314 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3933187..3934080 Desulfotomaculum ruminis DSM 2154 10740287 YP_004547351.1 CDS Desru_3865 NC_015589.1 3934249 3934836 R TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: tte:TTE0625 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease proteolytic subunit ClpP complement(3934249..3934836) Desulfotomaculum ruminis DSM 2154 10740288 YP_004547352.1 CDS Desru_3866 NC_015589.1 3934885 3935298 R KEGG: cbe:Cbei_4001 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(3934885..3935298) Desulfotomaculum ruminis DSM 2154 10740289 YP_004547353.1 CDS Desru_3867 NC_015589.1 3935464 3935943 R PFAM: protein of unknown function DUF163; KEGG: drm:Dred_3293 hypothetical protein; hypothetical protein complement(3935464..3935943) Desulfotomaculum ruminis DSM 2154 10740290 YP_004547354.1 CDS Desru_3868 NC_015589.1 3936031 3937290 R KEGG: drm:Dred_3294 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3936031..3937290) Desulfotomaculum ruminis DSM 2154 10740291 YP_004547355.1 CDS Desru_3869 NC_015589.1 3937397 3938305 R KEGG: drm:Dred_3295 hypothetical protein; hypothetical protein complement(3937397..3938305) Desulfotomaculum ruminis DSM 2154 10740292 YP_004547356.1 CDS Desru_3870 NC_015589.1 3938402 3938977 R PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_3296 TPR repeat-containing protein; hypothetical protein complement(3938402..3938977) Desulfotomaculum ruminis DSM 2154 10740293 YP_004547357.1 CDS Desru_3871 NC_015589.1 3939121 3940473 R KEGG: drm:Dred_3297 peptidase M23B; PFAM: Peptidase M23; G5 domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 complement(3939121..3940473) Desulfotomaculum ruminis DSM 2154 10740294 YP_004547358.1 CDS Desru_3872 NC_015589.1 3940635 3941987 R PFAM: Radical SAM domain protein; KEGG: drm:Dred_3298 radical SAM domain-containing protein; radical SAM protein complement(3940635..3941987) Desulfotomaculum ruminis DSM 2154 10740295 YP_004547359.1 CDS Desru_3873 NC_015589.1 3942067 3942213 R manually curated; KEGG: drm:Dred_3299 hypothetical protein; hypothetical protein complement(3942067..3942213) Desulfotomaculum ruminis DSM 2154 10740296 YP_004547360.1 CDS Desru_3874 NC_015589.1 3942368 3942595 D KEGG: pmx:PERMA_0406 oligopeptidase A; hypothetical protein 3942368..3942595 Desulfotomaculum ruminis DSM 2154 10740297 YP_004547361.1 CDS Desru_3875 NC_015589.1 3943260 3944546 R SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: drm:Dred_3300 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase complement(3943260..3944546) Desulfotomaculum ruminis DSM 2154 10740301 YP_004547362.1 CDS Desru_3876 NC_015589.1 3944793 3946115 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: drm:Dred_3301 replicative DNA helicase; SMART: AAA ATPase; replicative DNA helicase complement(3944793..3946115) Desulfotomaculum ruminis DSM 2154 10740303 YP_004547363.1 CDS Desru_3877 NC_015589.1 3946245 3948188 R SMART: AAA ATPase; TIGRFAM: ATP-dependent protease, Lon family; KEGG: drm:Dred_3302 endopeptidase La; PFAM: AAA ATPase central domain protein; ATP-dependent protease Lon family complement(3946245..3948188) Desulfotomaculum ruminis DSM 2154 10740304 YP_004547364.1 CDS Desru_3878 NC_015589.1 3948235 3948684 R KEGG: drm:Dred_3303 ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; 50S ribosomal protein L9 complement(3948235..3948684) Desulfotomaculum ruminis DSM 2154 10740305 YP_004547365.1 CDS Desru_3879 NC_015589.1 3948712 3949674 R PFAM: Protein of unknown function DUF2232, membrane; KEGG: drm:Dred_3304 membrane protein-like protein; hypothetical protein complement(3948712..3949674) Desulfotomaculum ruminis DSM 2154 10740306 YP_004547366.1 CDS Desru_3880 NC_015589.1 3949852 3950082 R KEGG: dae:Dtox_4353 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(3949852..3950082) Desulfotomaculum ruminis DSM 2154 10740307 YP_004547367.1 CDS Desru_3881 NC_015589.1 3950132 3950551 R KEGG: drm:Dred_3307 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(3950132..3950551) Desulfotomaculum ruminis DSM 2154 10740308 YP_004547368.1 CDS Desru_3882 NC_015589.1 3950588 3950875 R KEGG: drm:Dred_3308 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 complement(3950588..3950875) Desulfotomaculum ruminis DSM 2154 10740309 YP_004547369.1 CDS Desru_3883 NC_015589.1 3951112 3951306 R PFAM: protein of unknown function DUF951; KEGG: drm:Dred_3309 hypothetical protein; hypothetical protein complement(3951112..3951306) Desulfotomaculum ruminis DSM 2154 10740310 YP_004547370.1 CDS Desru_3884 NC_015589.1 3951299 3952165 R PFAM: MscS Mechanosensitive ion channel; KEGG: drm:Dred_3310 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(3951299..3952165) Desulfotomaculum ruminis DSM 2154 10740311 YP_004547371.1 CDS Desru_3885 NC_015589.1 3952311 3953708 R PFAM: peptidase M18 aminopeptidase I; KEGG: drm:Dred_3311 putative aminopeptidase 1; peptidase M18 aminopeptidase I complement(3952311..3953708) Desulfotomaculum ruminis DSM 2154 10740312 YP_004547372.1 CDS Desru_3886 NC_015589.1 3953772 3954539 R PFAM: Colicin V production protein; KEGG: drm:Dred_3312 hypothetical protein; colicin V production protein complement(3953772..3954539) Desulfotomaculum ruminis DSM 2154 10740313 YP_004547373.1 CDS Desru_3887 NC_015589.1 3954600 3955655 R KEGG: drm:Dred_3313 hypothetical protein; hypothetical protein complement(3954600..3955655) Desulfotomaculum ruminis DSM 2154 10740314 YP_004547374.1 CDS Desru_3888 NC_015589.1 3955787 3956371 D KEGG: drm:Dred_3314 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; sporulation protein YyaC 3955787..3956371 Desulfotomaculum ruminis DSM 2154 10740315 YP_004547375.1 CDS Desru_3889 NC_015589.1 3956464 3956910 R manually curated; KEGG: drm:Dred_3316 hypothetical protein; hypothetical protein complement(3956464..3956910) Desulfotomaculum ruminis DSM 2154 10740316 YP_004547376.1 CDS Desru_3890 NC_015589.1 3957429 3958271 R KEGG: drm:Dred_3318 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein complement(3957429..3958271) Desulfotomaculum ruminis DSM 2154 10740317 YP_004547377.1 CDS Desru_3891 NC_015589.1 3958613 3959308 R PFAM: protein of unknown function DUF554; KEGG: drm:Dred_3319 hypothetical protein; hypothetical protein complement(3958613..3959308) Desulfotomaculum ruminis DSM 2154 10740318 YP_004547378.1 CDS Desru_3892 NC_015589.1 3959345 3960226 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: drm:Dred_3320 ParB-like partition protein; SMART: ParB domain protein nuclease; parB-like partition protein complement(3959345..3960226) Desulfotomaculum ruminis DSM 2154 10740319 YP_004547379.1 CDS Desru_3893 NC_015589.1 3960219 3960980 R KEGG: drm:Dred_3321 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(3960219..3960980) Desulfotomaculum ruminis DSM 2154 10740320 YP_004547380.1 CDS Desru_3894 NC_015589.1 3961166 3961657 D KEGG: scl:sce5626 leucine responsive regulatory protein; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type; transcriptional regulator AsnC-type-like protein 3961166..3961657 Desulfotomaculum ruminis DSM 2154 10740321 YP_004547381.1 CDS Desru_3895 NC_015589.1 3961689 3962303 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bmd:BMD_1530 LysE family translocator protein; lysine exporter protein LysE/YggA 3961689..3962303 Desulfotomaculum ruminis DSM 2154 10740322 YP_004547382.1 CDS Desru_3896 NC_015589.1 3962513 3963250 R KEGG: drm:Dred_3322 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB complement(3962513..3963250) Desulfotomaculum ruminis DSM 2154 10740323 YP_004547383.1 CDS Desru_3897 NC_015589.1 3963228 3965126 R KEGG: drm:Dred_3323 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A complement(3963228..3965126) Desulfotomaculum ruminis DSM 2154 10740324 YP_004547384.1 CDS Desru_3898 NC_015589.1 3965137 3966522 R KEGG: drm:Dred_3324 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE complement(3965137..3966522) Desulfotomaculum ruminis DSM 2154 10740325 YP_004547385.1 CDS Desru_3899 NC_015589.1 3966634 3967254 R KEGG: drm:Dred_3325 single-stranded nucleic acid binding R3H domain-containing protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein; single-stranded nucleic acid binding R3H domain-containing protein complement(3966634..3967254) Desulfotomaculum ruminis DSM 2154 10740326 YP_004547386.1 CDS Desru_3900 NC_015589.1 3967229 3967912 R KEGG: drm:Dred_3326 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; membrane protein insertase YidC/Oxa1 family complement(3967229..3967912) Desulfotomaculum ruminis DSM 2154 10740327 YP_004547387.1 CDS Desru_3901 NC_015589.1 3967946 3968137 R KEGG: cdl:CDR20291_3539 hypothetical protein; manually curated; PFAM: protein of unknown function DUF37; hypothetical protein complement(3967946..3968137) Desulfotomaculum ruminis DSM 2154 10740328 YP_004547388.1 CDS Desru_3902 NC_015589.1 3968152 3968493 R KEGG: drm:Dred_3328 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P protein component complement(3968152..3968493) Desulfotomaculum ruminis DSM 2154 10740329 YP_004547389.1 CDS Desru_3903 NC_015589.1 3968581 3968715 R manually curated; TIGRFAM: ribosomal protein L34; KEGG: tjr:TherJR_3017 ribosomal protein L34; PFAM: ribosomal protein L34; 50S ribosomal protein L34 complement(3968581..3968715) Desulfotomaculum ruminis DSM 2154 10740330 Desru_R0004 tRNA Desru_R0004 NC_015589.1 28441 28530 D tRNA-Ser 28441..28530 Desulfotomaculum ruminis DSM 2154 10736369 Desru_R0005 tRNA Desru_R0005 NC_015589.1 28550 28644 D tRNA-Ser 28550..28644 Desulfotomaculum ruminis DSM 2154 10736370 Desru_R0006 tRNA Desru_R0006 NC_015589.1 30118 30194 D tRNA-Arg 30118..30194 Desulfotomaculum ruminis DSM 2154 10736373 Desru_R0007 tRNA Desru_R0007 NC_015589.1 30250 30326 D tRNA-Arg 30250..30326 Desulfotomaculum ruminis DSM 2154 10736374 Desru_R0008 tRNA Desru_R0008 NC_015589.1 30384 30460 D tRNA-Arg 30384..30460 Desulfotomaculum ruminis DSM 2154 10736375 Desru_R0009 tRNA Desru_R0009 NC_015589.1 30968 31061 D tRNA-Ser 30968..31061 Desulfotomaculum ruminis DSM 2154 10736377 Desru_R0010 tRNA Desru_R0010 NC_015589.1 97927 98018 D tRNA-Ser 97927..98018 Desulfotomaculum ruminis DSM 2154 10736443 Desru_R0012 tRNA Desru_R0012 NC_015589.1 253740 253816 D tRNA-Ile 253740..253816 Desulfotomaculum ruminis DSM 2154 10736609 Desru_R0013 tRNA Desru_R0013 NC_015589.1 253939 254014 D tRNA-Ala 253939..254014 Desulfotomaculum ruminis DSM 2154 10736610 Desru_R0016 tRNA Desru_R0016 NC_015589.1 257256 257330 D tRNA-Asn 257256..257330 Desulfotomaculum ruminis DSM 2154 10736613 Desru_R0017 tRNA Desru_R0017 NC_015589.1 285363 285438 D tRNA-Thr 285363..285438 Desulfotomaculum ruminis DSM 2154 10736640 Desru_R0018 tRNA Desru_R0018 NC_015589.1 285448 285533 D tRNA-Tyr 285448..285533 Desulfotomaculum ruminis DSM 2154 10736641 Desru_R0019 tRNA Desru_R0019 NC_015589.1 285609 285684 D tRNA-Met 285609..285684 Desulfotomaculum ruminis DSM 2154 10736642 Desru_R0020 tRNA Desru_R0020 NC_015589.1 285688 285763 D tRNA-Thr 285688..285763 Desulfotomaculum ruminis DSM 2154 10736643 Desru_R0021 tRNA Desru_R0021 NC_015589.1 285771 285847 D tRNA-Met 285771..285847 Desulfotomaculum ruminis DSM 2154 10736644 Desru_R0025 tRNA Desru_R0025 NC_015589.1 660484 660560 R tRNA-Asp complement(660484..660560) Desulfotomaculum ruminis DSM 2154 10736997 Desru_R0026 tRNA Desru_R0026 NC_015589.1 660567 660642 R tRNA-Val complement(660567..660642) Desulfotomaculum ruminis DSM 2154 10736998 Desru_R0027 tRNA Desru_R0027 NC_015589.1 661218 661293 D tRNA-Val 661218..661293 Desulfotomaculum ruminis DSM 2154 10737000 Desru_R0028 tRNA Desru_R0028 NC_015589.1 661299 661374 D tRNA-Thr 661299..661374 Desulfotomaculum ruminis DSM 2154 10737001 Desru_R0029 tRNA Desru_R0029 NC_015589.1 663393 663468 D tRNA-Thr 663393..663468 Desulfotomaculum ruminis DSM 2154 10737003 Desru_R0030 tRNA Desru_R0030 NC_015589.1 790044 790119 R tRNA-Lys complement(790044..790119) Desulfotomaculum ruminis DSM 2154 10737147 Desru_R0031 tRNA Desru_R0031 NC_015589.1 878565 878639 R tRNA-Arg complement(878565..878639) Desulfotomaculum ruminis DSM 2154 10737222 Desru_R0032 tRNA Desru_R0032 NC_015589.1 965489 965562 D tRNA-Gly 965489..965562 Desulfotomaculum ruminis DSM 2154 10737308 Desru_R0033 tRNA Desru_R0033 NC_015589.1 995591 995667 R tRNA-Arg complement(995591..995667) Desulfotomaculum ruminis DSM 2154 10737339 Desru_R0034 tRNA Desru_R0034 NC_015589.1 1023465 1023541 D tRNA-His 1023465..1023541 Desulfotomaculum ruminis DSM 2154 10737373 Desru_R0035 tRNA Desru_R0035 NC_015589.1 1023563 1023637 D tRNA-Gln 1023563..1023637 Desulfotomaculum ruminis DSM 2154 10737374 Desru_R0036 tRNA Desru_R0036 NC_015589.1 1023649 1023724 D tRNA-Lys 1023649..1023724 Desulfotomaculum ruminis DSM 2154 10737375 Desru_R0037 tRNA Desru_R0037 NC_015589.1 1023735 1023819 D tRNA-Leu 1023735..1023819 Desulfotomaculum ruminis DSM 2154 10737376 Desru_R0038 tRNA Desru_R0038 NC_015589.1 1204711 1204785 D tRNA-Asn 1204711..1204785 Desulfotomaculum ruminis DSM 2154 10737551 Desru_R0039 tRNA Desru_R0039 NC_015589.1 1204796 1204870 D tRNA-Met 1204796..1204870 Desulfotomaculum ruminis DSM 2154 10737552 Desru_R0040 tRNA Desru_R0040 NC_015589.1 1204920 1204995 D tRNA-Glu 1204920..1204995 Desulfotomaculum ruminis DSM 2154 10737553 Desru_R0041 tRNA Desru_R0041 NC_015589.1 1205000 1205075 D tRNA-Val 1205000..1205075 Desulfotomaculum ruminis DSM 2154 10737554 Desru_R0042 tRNA Desru_R0042 NC_015589.1 1213677 1213752 D tRNA-Val 1213677..1213752 Desulfotomaculum ruminis DSM 2154 10737563 Desru_R0043 tRNA Desru_R0043 NC_015589.1 1393581 1393668 R tRNA-Leu complement(1393581..1393668) Desulfotomaculum ruminis DSM 2154 10737759 Desru_R0044 tRNA Desru_R0044 NC_015589.1 1627410 1627484 D tRNA-Gly 1627410..1627484 Desulfotomaculum ruminis DSM 2154 10737983 Desru_R0045 tRNA Desru_R0045 NC_015589.1 1633494 1633568 D tRNA-Gln 1633494..1633568 Desulfotomaculum ruminis DSM 2154 10737993 Desru_R0046 tRNA Desru_R0046 NC_015589.1 1644025 1644118 R tRNA-Sec complement(1644025..1644118) Desulfotomaculum ruminis DSM 2154 10738001 Desru_R0047 tRNA Desru_R0047 NC_015589.1 1669351 1669437 R tRNA-Leu complement(1669351..1669437) Desulfotomaculum ruminis DSM 2154 10738029 Desru_R0048 tRNA Desru_R0048 NC_015589.1 1677704 1677790 R tRNA-Leu complement(1677704..1677790) Desulfotomaculum ruminis DSM 2154 10738039 Desru_R0049 tRNA Desru_R0049 NC_015589.1 1678261 1678335 R tRNA-Gln complement(1678261..1678335) Desulfotomaculum ruminis DSM 2154 10738040 Desru_R0050 tRNA Desru_R0050 NC_015589.1 1678339 1678424 R tRNA-Tyr complement(1678339..1678424) Desulfotomaculum ruminis DSM 2154 10738041 Desru_R0051 tRNA Desru_R0051 NC_015589.1 1678437 1678512 R tRNA-Glu complement(1678437..1678512) Desulfotomaculum ruminis DSM 2154 10738042 Desru_R0052 tRNA Desru_R0052 NC_015589.1 1697285 1697361 R tRNA-Pro complement(1697285..1697361) Desulfotomaculum ruminis DSM 2154 10738060 Desru_R0053 tRNA Desru_R0053 NC_015589.1 1712870 1712946 D tRNA-Pro 1712870..1712946 Desulfotomaculum ruminis DSM 2154 10738077 Desru_R0054 tRNA Desru_R0054 NC_015589.1 2236000 2236075 R tRNA-Trp complement(2236000..2236075) Desulfotomaculum ruminis DSM 2154 10738604 Desru_R0057 tRNA Desru_R0057 NC_015589.1 2460853 2460928 R tRNA-Ala complement(2460853..2460928) Desulfotomaculum ruminis DSM 2154 10738824 Desru_R0058 tRNA Desru_R0058 NC_015589.1 2460970 2461046 R tRNA-Ile complement(2460970..2461046) Desulfotomaculum ruminis DSM 2154 10738825 Desru_R0060 tRNA Desru_R0060 NC_015589.1 2537139 2537213 R tRNA-Val complement(2537139..2537213) Desulfotomaculum ruminis DSM 2154 10738892 Desru_R0061 tRNA Desru_R0061 NC_015589.1 2558621 2558705 D tRNA-Leu 2558621..2558705 Desulfotomaculum ruminis DSM 2154 10738913 Desru_R0064 tRNA Desru_R0064 NC_015589.1 2816013 2816088 D tRNA-Met 2816013..2816088 Desulfotomaculum ruminis DSM 2154 10739150 Desru_R0065 tRNA Desru_R0065 NC_015589.1 2854058 2854131 R tRNA-Ala complement(2854058..2854131) Desulfotomaculum ruminis DSM 2154 10739190 Desru_R0066 tRNA Desru_R0066 NC_015589.1 2858454 2858529 R tRNA-Ala complement(2858454..2858529) Desulfotomaculum ruminis DSM 2154 10739197 Desru_R0071 tRNA Desru_R0071 NC_015589.1 2955495 2955571 D tRNA-Pro 2955495..2955571 Desulfotomaculum ruminis DSM 2154 10739306 Desru_R0073 tRNA Desru_R0073 NC_015589.1 3470058 3470144 R tRNA-Leu complement(3470058..3470144) Desulfotomaculum ruminis DSM 2154 10739817 Desru_R0074 tRNA Desru_R0074 NC_015589.1 3470218 3470294 R tRNA-Asp complement(3470218..3470294) Desulfotomaculum ruminis DSM 2154 10739818 Desru_R0075 tRNA Desru_R0075 NC_015589.1 3470302 3470376 R tRNA-Gly complement(3470302..3470376) Desulfotomaculum ruminis DSM 2154 10739819 Desru_R0076 tRNA Desru_R0076 NC_015589.1 3471411 3471485 R tRNA-Cys complement(3471411..3471485) Desulfotomaculum ruminis DSM 2154 10739822 Desru_R0077 tRNA Desru_R0077 NC_015589.1 3471494 3471568 R tRNA-Gly complement(3471494..3471568) Desulfotomaculum ruminis DSM 2154 10739823 Desru_R0078 tRNA Desru_R0078 NC_015589.1 3471579 3471654 R tRNA-Phe complement(3471579..3471654) Desulfotomaculum ruminis DSM 2154 10739824 Desru_R0079 tRNA Desru_R0079 NC_015589.1 3472663 3472737 R tRNA-Cys complement(3472663..3472737) Desulfotomaculum ruminis DSM 2154 10739826 Desru_R0080 tRNA Desru_R0080 NC_015589.1 3472747 3472821 R tRNA-Gly complement(3472747..3472821) Desulfotomaculum ruminis DSM 2154 10739827 Desru_R0081 tRNA Desru_R0081 NC_015589.1 3472832 3472907 R tRNA-Phe complement(3472832..3472907) Desulfotomaculum ruminis DSM 2154 10739828 Desru_R0082 tRNA Desru_R0082 NC_015589.1 3472920 3472996 R tRNA-Asp complement(3472920..3472996) Desulfotomaculum ruminis DSM 2154 10739829 Desru_R0084 tRNA Desru_R0084 NC_015589.1 3942715 3942789 R tRNA-Gly complement(3942715..3942789) Desulfotomaculum ruminis DSM 2154 10740298 Desru_R0085 tRNA Desru_R0085 NC_015589.1 3942847 3942922 R tRNA-Glu complement(3942847..3942922) Desulfotomaculum ruminis DSM 2154 10740299 Desru_R0086 tRNA Desru_R0086 NC_015589.1 3942939 3943014 R tRNA-Lys complement(3942939..3943014) Desulfotomaculum ruminis DSM 2154 10740300 Desru_R0001 rRNA Desru_R0001 NC_015589.1 10645 12163 D 16S ribosomal RNA 10645..12163 Desulfotomaculum ruminis DSM 2154 10736351 Desru_R0002 rRNA Desru_R0002 NC_015589.1 12539 15474 D 23S ribosomal RNA 12539..15474 Desulfotomaculum ruminis DSM 2154 10736352 Desru_R0003 rRNA Desru_R0003 NC_015589.1 15534 15650 D 5S ribosomal RNA 15534..15650 Desulfotomaculum ruminis DSM 2154 10736353 Desru_R0011 rRNA Desru_R0011 NC_015589.1 251971 253488 D 16S ribosomal RNA 251971..253488 Desulfotomaculum ruminis DSM 2154 10736608 Desru_R0014 rRNA Desru_R0014 NC_015589.1 254125 257061 D 23S ribosomal RNA 254125..257061 Desulfotomaculum ruminis DSM 2154 10736611 Desru_R0015 rRNA Desru_R0015 NC_015589.1 257121 257237 D 5S ribosomal RNA 257121..257237 Desulfotomaculum ruminis DSM 2154 10736612 Desru_R0022 rRNA Desru_R0022 NC_015589.1 632034 633551 D 16S ribosomal RNA 632034..633551 Desulfotomaculum ruminis DSM 2154 10736970 Desru_R0023 rRNA Desru_R0023 NC_015589.1 633816 636752 D 23S ribosomal RNA 633816..636752 Desulfotomaculum ruminis DSM 2154 10736971 Desru_R0024 rRNA Desru_R0024 NC_015589.1 636812 636928 D 5S ribosomal RNA 636812..636928 Desulfotomaculum ruminis DSM 2154 10736972 Desru_R0055 rRNA Desru_R0055 NC_015589.1 2457503 2457619 R 5S ribosomal RNA complement(2457503..2457619) Desulfotomaculum ruminis DSM 2154 10738822 Desru_R0056 rRNA Desru_R0056 NC_015589.1 2457680 2460616 R 23S ribosomal RNA complement(2457680..2460616) Desulfotomaculum ruminis DSM 2154 10738823 Desru_R0059 rRNA Desru_R0059 NC_015589.1 2461297 2462814 R 16S ribosomal RNA complement(2461297..2462814) Desulfotomaculum ruminis DSM 2154 10738826 Desru_R0068 rRNA Desru_R0068 NC_015589.1 2886157 2886273 R 5S ribosomal RNA complement(2886157..2886273) Desulfotomaculum ruminis DSM 2154 10739231 Desru_R0069 rRNA Desru_R0069 NC_015589.1 2886333 2889269 R 23S ribosomal RNA complement(2886333..2889269) Desulfotomaculum ruminis DSM 2154 10739232 Desru_R0070 rRNA Desru_R0070 NC_015589.1 2889645 2891162 R 16S ribosomal RNA complement(2889645..2891162) Desulfotomaculum ruminis DSM 2154 10739233