-- dump date   	20140619_063930
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004543594.1	TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: drm:Dred_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase
YP_004543595.1	SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: drm:Dred_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain
YP_004543596.1	KEGG: drm:Dred_0003 RNA-binding S4 domain-containing protein
YP_004543597.1	KEGG: drm:Dred_0004 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein
YP_004543598.1	KEGG: drm:Dred_0005 hypothetical protein
YP_004543599.1	SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: drm:Dred_0006 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein
YP_004543600.1	PFAM: O-methyltransferase family 2; KEGG: pth:PTH_1424 hypothetical protein
YP_004543601.1	SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: drm:Dred_0007 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_004543603.1	KEGG: drm:Dred_0009 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004543604.1	PFAM: YheO-like domain-containing protein; KEGG: drm:Dred_0613 YheO domain-containing protein
YP_004543605.1	KEGG: drm:Dred_0614 putative endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP
YP_004543606.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: drm:Dred_0615 threonine synthase
YP_004543607.1	KEGG: ilo:IL1037 Na+/H+ - glutamate/aspartate symport protein
YP_004543608.1	PFAM: sodium:dicarboxylate symporter; KEGG: bmq:BMQ_3410 proton/glutamate symport protein
YP_004543609.1	KEGG: drm:Dred_0617 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein
YP_004543610.1	KEGG: pth:PTH_0010 glutamine amidotransferase subunit PdxT; TIGRFAM: SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase
YP_004543611.1	KEGG: rha:RHA1_ro04536 hypothetical protein
YP_004543612.1	KEGG: drm:Dred_0012 hypothetical protein
YP_004543613.1	PFAM: aminotransferase class V; KEGG: drm:Dred_0013 aminotransferase, class V
YP_004543614.1	TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: drm:Dred_0014 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein
YP_004543615.1	TIGRFAM: seryl-tRNA synthetase; KEGG: drm:Dred_0015 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like
YP_004543616.1	KEGG: art:Arth_2195 hypothetical protein
YP_004543617.1	PFAM: CBS domain containing protein; KEGG: drm:Dred_0016 hypothetical protein
YP_004543618.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: drm:Dred_0017 CMP/dCMP deaminase, zinc-binding
YP_004543619.1	KEGG: dae:Dtox_0488 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004543620.1	KEGG: ckr:CKR_0015 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004543621.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: ckr:CKR_0017 hypothetical protein
YP_004543622.1	PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: dae:Dtox_3161 hypothetical protein
YP_004543623.1	PFAM: regulatory protein TetR; KEGG: amt:Amet_1502 TetR family transcriptional regulator
YP_004543624.1	KEGG: gme:Gmet_2130 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
YP_004543625.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_1667 binding-protein-dependent transport systems inner membrane component
YP_004543626.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dae:Dtox_0493 binding-protein-dependent transport systems inner membrane component
YP_004543627.1	KEGG: dhd:Dhaf_1669 RND family efflux transporter MFP subunit
YP_004543628.1	KEGG: dae:Dtox_0495 hypothetical protein
YP_004543629.1	KEGG: dae:Dtox_0496 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase
YP_004543630.1	PFAM: extracellular solute-binding protein family 1; KEGG: dae:Dtox_0497 extracellular solute-binding protein family 1
YP_004543631.1	manually curated; KEGG: cbb:CLD_3763 hypothetical protein
YP_004543632.1	PFAM: acyl-ACP thioesterase; KEGG: gym:GYMC10_0920 acyl-ACP thioesterase
YP_004543633.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ddi:DDB_G0272424 GCN5-related N-acetyltransferase
YP_004543634.1	KEGG: bmd:BMD_1613 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004543635.1	PFAM: protein of unknown function DUF161; KEGG: cpy:Cphy_1610 hypothetical protein
YP_004543636.1	KEGG: cdl:CDR20291_1269 MerR-family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR
YP_004543638.1	PFAM: regulatory protein MarR; KEGG: clj:CLJU_c33110 putative MarR family transcriptional regulator
YP_004543639.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dae:Dtox_2038 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004543640.1	KEGG: cbe:Cbei_3209 hypothetical protein
YP_004543641.1	KEGG: erg:ERGA_CDS_02180 phosphatidylglycerophosphatase A
YP_004543642.1	PFAM: branched-chain amino acid transport; KEGG: bsu:BSU26700 branched-chain amino acid transporter
YP_004543643.1	KEGG: bsu:BSU26710 branched-chain amino acid transporter; TIGRFAM: branched-chain amino acid transporter, AzlC; PFAM: AzlC family protein
YP_004543644.1	KEGG: chy:CHY_0786 cotJC protein; PFAM: manganese containing catalase
YP_004543645.1	PFAM: major facilitator superfamily MFS_1; KEGG: cbb:CLD_0913 major facilitator family protein
YP_004543646.1	KEGG: bss:BSUW23_01130 putative AraC/XylS family, cupin family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004543647.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bld:BLi00251 YbfH
YP_004543648.1	KEGG: tjr:TherJR_0363 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein
YP_004543649.1	KEGG: swo:Swol_1363 YobV
YP_004543650.1	PFAM: transcription activator effector binding; KEGG: swo:Swol_1364 hypothetical protein
YP_004543651.1	KEGG: drm:Dred_1485 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004543652.1	PFAM: arsenate reductase and related; KEGG: lbf:LBF_2477 glutaredoxin family protein
YP_004543653.1	KEGG: dae:Dtox_2061 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component
YP_004543654.1	PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: dae:Dtox_2062 transketolase domain protein
YP_004543655.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: nth:Nther_0771 NADH:flavin oxidoreductase/NADH oxidase
YP_004543656.1	KEGG: pth:PTH_2639 response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004543657.1	KEGG: bbe:BBR47_52160 two-component sensor histidine kinase
YP_004543658.1	KEGG: dau:Daud_1560 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein
YP_004543659.1	KEGG: drm:Dred_1557 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004543660.1	KEGG: acl:ACL_0673 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004543661.1	TIGRFAM: signal peptidase I; KEGG: cyh:Cyan8802_0195 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_004543662.1	KEGG: drm:Dred_1541 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543663.1	KEGG: drm:Dred_1540 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_004543664.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: dae:Dtox_1936 electron transfer flavoprotein alpha/beta-subunit
YP_004543665.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: drm:Dred_1538 electron transfer flavoprotein beta-subunit
YP_004543666.1	KEGG: chy:CHY_0060 anion transporter family protein; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter
YP_004543667.1	KEGG: dhd:Dhaf_2268 ATP-dependent DNA helicase replicase
YP_004543668.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: dhd:Dhaf_0365 PAS modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein
YP_004543669.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: pca:Pcar_2847 alcohol dehydrogenase, class IV
YP_004543670.1	PFAM: Aldehyde Dehydrogenase; KEGG: bmq:BMQ_3643 aldehyde dehydrogenase (NAD) family protein
YP_004543671.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mrb:Mrub_2461 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
YP_004543672.1	KEGG: dhd:Dhaf_4412 malate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase
YP_004543673.1	PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein
YP_004543674.1	KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein
YP_004543675.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmq:BMQ_3321 transporter major facilitator superfamily
YP_004543676.1	KEGG: dba:Dbac_2146 6-phosphogluconate dehydrogenase NAD-binding; PFAM: 6-phosphogluconate dehydrogenase NAD-binding
YP_004543677.1	PFAM: alpha/beta hydrolase fold; KEGG: dal:Dalk_0030 alpha/beta hydrolase fold protein
YP_004543678.1	KEGG: pth:PTH_2806 transcriptional regulator; PFAM: cyclic nucleotide-binding; sigma-54 factor interaction domain-containing protein; SMART: cyclic nucleotide-binding
YP_004543679.1	SMART: AAA ATPase; KEGG: drm:Dred_0041 phosphoribulokinase/uridine kinase
YP_004543680.1	KEGG: dae:Dtox_0610 protein of unknown function DUF362
YP_004543681.1	TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: drm:Dred_0042 DNA polymerase III, subunits gamma and tau; SMART: AAA ATPase
YP_004543682.1	PFAM: Uncharacterised protein family UPF0133; KEGG: drm:Dred_0043 hypothetical protein
YP_004543683.1	TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: drm:Dred_0044 recombination protein RecR; SMART: Toprim sub domain-containing protein
YP_004543684.1	KEGG: drm:Dred_0045 hypothetical protein; TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA
YP_004543685.1	KEGG: drm:Dred_0046 hypothetical protein
YP_004543686.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: drm:Dred_0047 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
YP_004543687.1	PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: drm:Dred_0048 thiamine pyrophosphate binding domain-containing protein
YP_004543688.1	KEGG: drm:Dred_0049 pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain
YP_004543689.1	KEGG: drm:Dred_2822 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543690.1	KEGG: drm:Dred_0051 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein
YP_004543691.1	KEGG: drm:Dred_0052 hypothetical protein
YP_004543692.1	KEGG: drm:Dred_0053 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein
YP_004543693.1	PFAM: GerA spore germination protein; KEGG: drm:Dred_0054 GerA spore germination protein
YP_004543694.1	KEGG: drm:Dred_0055 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein
YP_004543695.1	PFAM: Sigma-G inhibitor, Gin; KEGG: drm:Dred_0056 hypothetical protein
YP_004543696.1	KEGG: drm:Dred_0057 hypothetical protein
YP_004543697.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: drm:Dred_0058 Orn/Lys/Arg decarboxylase, major region
YP_004543698.1	TIGRFAM: thymidylate kinase; KEGG: drm:Dred_0059 dTMP kinase; PFAM: thymidylate kinase
YP_004543699.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: drm:Dred_0060 DNA polymerase III, delta prime subunit
YP_004543700.1	PFAM: PSP1 domain protein; KEGG: drm:Dred_0061 PSP1 domain-containing protein
YP_004543701.1	PFAM: protein of unknown function DUF972; KEGG: drm:Dred_0062 hypothetical protein
YP_004543702.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: drm:Dred_0063 uroporphyrin-III C/tetrapyrrole methyltransferase
YP_004543703.1	KEGG: drm:Dred_0064 AbrB family transcriptional regulator; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein
YP_004543704.1	PFAM: transposase IS3/IS911 family protein; KEGG: bmj:BMULJ_05181 ISBmu5a transposase
YP_004543705.1	PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB
YP_004543706.1	KEGG: drm:Dred_0065 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M)
YP_004543707.1	KEGG: drm:Dred_0066 TatD family hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease
YP_004543708.1	TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: drm:Dred_0067 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_004543709.1	PFAM: cyclase family protein; KEGG: cbe:Cbei_3925 cyclase family protein
YP_004543710.1	KEGG: drm:Dred_0068 hypothetical protein
YP_004543711.1	PFAM: 3D domain-containing protein; G5 domain protein; KEGG: drm:Dred_0069 3D domain-containing protein
YP_004543712.1	PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348; KEGG: drm:Dred_0070 3D domain-containing protein
YP_004543713.1	KEGG: dae:Dtox_1795 thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein
YP_004543714.1	PFAM: protein of unknown function DUF77; KEGG: tjr:TherJR_0062 protein of unknown function DUF77
YP_004543715.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tjr:TherJR_0063 binding-protein-dependent transport systems inner membrane component
YP_004543716.1	KEGG: drm:Dred_3204 membrane lipoprotein lipid attachment site
YP_004543717.1	KEGG: rop:ROP_13040 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004543718.1	KEGG: drm:Dred_0071 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004543719.1	KEGG: drm:Dred_2890 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC
YP_004543720.1	KEGG: pth:PTH_0926 hypothetical protein; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004543721.1	KEGG: drm:Dred_0072 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein
YP_004543722.1	PFAM: thiazole biosynthesis family protein; KEGG: drm:Dred_0073 thiazole biosynthesis family protein
YP_004543723.1	KEGG: drm:Dred_0074 thiazole biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein
YP_004543724.1	KEGG: pth:PTH_0642 thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein
YP_004543725.1	KEGG: dae:Dtox_1683 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_004543726.1	SMART: Ribosomal RNA adenine methylase transferase-like; TIGRFAM: dimethyladenosine transferase; KEGG: drm:Dred_0077 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase
YP_004543727.1	PFAM: protein of unknown function DUF458; KEGG: drm:Dred_0078 hypothetical protein
YP_004543728.1	KEGG: dhd:Dhaf_0029 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor
YP_004543729.1	PFAM: periplasmic solute binding protein; KEGG: dhd:Dhaf_0030 periplasmic solute binding protein
YP_004543730.1	KEGG: dhd:Dhaf_0031 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004543731.1	PFAM: ABC-3 protein; KEGG: dsy:DSY0094 hypothetical protein
YP_004543732.1	KEGG: dhd:Dhaf_0033 ABC-3 protein; manually curated; PFAM: ABC-3 protein
YP_004543734.1	KEGG: drm:Dred_0079 peptidase U57, YabG; TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG
YP_004543735.1	KEGG: drm:Dred_0080 hypothetical protein
YP_004543736.1	PFAM: SCP-like extracellular; KEGG: drm:Dred_0081 allergen V5/TPX-1 family protein
YP_004543737.1	KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004543738.1	KEGG: drm:Dred_0083 hypothetical protein
YP_004543739.1	KEGG: drm:Dred_0084 hypothetical protein
YP_004543740.1	PFAM: Uncharacterised protein family UPF0133; KEGG: drm:Dred_0085 hypothetical protein
YP_004543741.1	PFAM: Uncharacterised protein family UPF0133; KEGG: drm:Dred_0086 hypothetical protein
YP_004543742.1	KEGG: mpd:MCP_0336 hypothetical protein
YP_004543743.1	KEGG: drm:Dred_0088 hypothetical protein
YP_004543744.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: drm:Dred_0089 peptidase S8/S53 subtilisin kexin sedolisin
YP_004543745.1	KEGG: drm:Dred_0090 hypothetical protein
YP_004543746.1	PFAM: protein of unknown function DUF606; KEGG: drm:Dred_0091 hypothetical protein
YP_004543747.1	KEGG: drm:Dred_0093 ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004543748.1	KEGG: drm:Dred_0094 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_004543749.1	KEGG: drm:Dred_0095 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004543750.1	KEGG: drm:Dred_0096 hypothetical protein
YP_004543751.1	KEGG: drm:Dred_0097 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein
YP_004543752.1	PFAM: SpoVG family protein; KEGG: drm:Dred_0098 SpoVG family protein
YP_004543753.1	KEGG: drm:Dred_0099 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein
YP_004543754.1	TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: drm:Dred_0100 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_004543755.1	KEGG: rno:690311 similar to Alpha-1-antitrypsin-related protein precursor
YP_004543756.1	PFAM: protein of unknown function DUF39; KEGG: drm:Dred_0101 hypothetical protein
YP_004543757.1	PFAM: NIL domain; KEGG: drm:Dred_0102 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543758.1	PFAM: ApbE family lipoprotein; KEGG: drm:Dred_0103 hypothetical protein
YP_004543759.1	KEGG: bpt:Bpet0960 hypothetical protein
YP_004543760.1	PFAM: Rubrerythrin; KEGG: drm:Dred_0104 rubrerythrin
YP_004543761.1	KEGG: drm:Dred_0106 hypothetical protein
YP_004543762.1	PFAM: PRC-barrel domain protein; KEGG: drm:Dred_0107 PRC-barrel domain-containing protein
YP_004543763.1	KEGG: drm:Dred_0108 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like
YP_004543764.1	TIGRFAM: peptidyl-tRNA hydrolase; KEGG: drm:Dred_0109 aminoacyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase
YP_004543765.1	KEGG: drm:Dred_0110 hypothetical protein
YP_004543766.1	TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: drm:Dred_0111 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein
YP_004543767.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: drm:Dred_0112 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004543768.1	KEGG: drm:Dred_0113 AbrB family transcriptional regulator; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein
YP_004543769.1	KEGG: drm:Dred_0114 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004543770.1	KEGG: drm:Dred_0115 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_004543771.1	KEGG: drm:Dred_0116 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_004543772.1	KEGG: drm:Dred_0117 SpoIID/LytB domain-containing protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D
YP_004543773.1	SMART: metal-dependent phosphohydrolase HD region; KEGG: bts:Btus_2993 metal dependent phosphohydrolase
YP_004543774.1	KEGG: bts:Btus_2994 hypothetical protein
YP_004543775.1	KEGG: drm:Dred_0118 YabP family protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein
YP_004543776.1	KEGG: drm:Dred_0119 hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like
YP_004543777.1	PFAM: Sigma-70 region 4 type 2; KEGG: drm:Dred_0120 ECF subfamily RNA polymerase sigma-24 factor
YP_004543778.1	PFAM: Septum formation initiator; KEGG: drm:Dred_0121 septum formation initiator
YP_004543779.1	PFAM: RNA binding S1 domain protein; KEGG: drm:Dred_0122 RNA-binding S1 domain-containing protein
YP_004543780.1	PFAM: Ppx/GppA phosphatase; KEGG: drm:Dred_0123 Ppx/GppA phosphatase
YP_004543781.1	SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: drm:Dred_0124 phosphoprotein phosphatase; PFAM: Stage II sporulation protein E
YP_004543782.1	KEGG: drm:Dred_0125 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase
YP_004543783.1	SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: drm:Dred_0126 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein
YP_004543784.1	PFAM: nucleoside diphosphate kinase; KEGG: drm:Dred_0127 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase
YP_004543785.1	KEGG: drm:Dred_0128 hypothetical protein
YP_004543786.1	KEGG: drm:Dred_0129 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS
YP_004543787.1	PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_1837 major facilitator superfamily MFS_1
YP_004543788.1	KEGG: dae:Dtox_1190 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein
YP_004543789.1	KEGG: abn:AB57_2723 hypothetical protein
YP_004543790.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_0143 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543791.1	KEGG: dpe:Dper_GL21957 GL21957 gene product from transcript GL21957-RA
YP_004543792.1	KEGG: dae:Dtox_1278 methyl-viologen-reducing hydrogenase delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit
YP_004543793.1	PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: drm:Dred_0146 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543794.1	KEGG: drm:Dred_0147 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543795.1	PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: drm:Dred_0148 oxidoreductase FAD/NAD(P)-binding subunit
YP_004543796.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_0142 hypothetical protein
YP_004543797.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_0143 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543798.1	KEGG: dpe:Dper_GL21957 GL21957 gene product from transcript GL21957-RA
YP_004543799.1	KEGG: dae:Dtox_1278 methyl-viologen-reducing hydrogenase delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit
YP_004543800.1	PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: drm:Dred_0146 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543801.1	KEGG: drm:Dred_0147 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004543802.1	PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: drm:Dred_0148 oxidoreductase FAD/NAD(P)-binding subunit
YP_004543803.1	KEGG: drm:Dred_0727 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; copper amine oxidase-like domain-containing protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor
YP_004543804.1	PFAM: membrane-flanked domain; KEGG: rci:RRC269 hypothetical protein
YP_004543805.1	PFAM: membrane-flanked domain; KEGG: bsu:BSU04590 hypothetical protein
YP_004543806.1	KEGG: cbi:CLJ_B1057 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004543807.1	PFAM: cyclase family protein; KEGG: cby:CLM_1170 putative cyclase
YP_004543808.1	PFAM: asparagine synthase; KEGG: drm:Dred_0151 PP-loop domain-containing protein
YP_004543809.1	PFAM: thioesterase superfamily protein; KEGG: drm:Dred_0152 thioesterase superfamily protein
YP_004543810.1	PFAM: nitroreductase; KEGG: drm:Dred_0153 nitroreductase
YP_004543811.1	KEGG: dae:Dtox_2182 hypothetical protein
YP_004543812.1	KEGG: gct:GC56T3_1404 hypothetical protein
YP_004543813.1	KEGG: dae:Dtox_1632 hypothetical protein
YP_004543814.1	KEGG: hmo:HM1_0417 hypothetical protein
YP_004543815.1	PFAM: E1-E2 ATPase-associated domain protein; KEGG: kra:Krad_0290 heavy metal translocating P-type ATPase
YP_004543816.1	TIGRFAM: dihydropteroate synthase; KEGG: drm:Dred_0154 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_004543817.1	TIGRFAM: dihydroneopterin aldolase; KEGG: drm:Dred_0155 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase
YP_004543818.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: drm:Dred_0156 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_004543819.1	KEGG: drm:Dred_0158 metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004543820.1	PFAM: protein of unknown function DUF1648; KEGG: msv:Mesil_1612 protein of unknown function DUF1648
YP_004543821.1	PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: drm:Dred_0159 6-phosphogluconate dehydrogenase, NAD-binding
YP_004543822.1	PFAM: Ketopantoate hydroxymethyltransferase; manually curated; KEGG: drm:Dred_0160 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_004543823.1	KEGG: drm:Dred_0161 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase
YP_004543824.1	TIGRFAM: aspartate 1-decarboxylase; KEGG: drm:Dred_0162 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase
YP_004543825.1	TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: drm:Dred_0163 quinolinate synthetase; PFAM: Quinolinate synthetase A
YP_004543826.1	TIGRFAM: L-aspartate oxidase; KEGG: drm:Dred_0164 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004543827.1	TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: drm:Dred_0165 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_004543828.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: drm:Dred_0430 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein
YP_004543829.1	KEGG: drm:Dred_2972 hypothetical protein
YP_004543830.1	TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; KEGG: drm:Dred_0168 biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein
YP_004543831.1	PFAM: BioY protein; KEGG: drm:Dred_0169 BioY protein
YP_004543832.1	PFAM: GCN5-related N-acetyltransferase; KEGG: drm:Dred_0739 GCN5-related N-acetyltransferase
YP_004543833.1	PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: drm:Dred_0170 nitrite and sulphite reductase 4Fe-4S region
YP_004543834.1	TIGRFAM: transcriptional activator, Baf family; KEGG: drm:Dred_0171 Baf family transcriptional activator; PFAM: Bvg accessory factor
YP_004543835.1	KEGG: drm:Dred_0172 nifR3 family TIM-barrel protein; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS
YP_004543836.1	PFAM: polysaccharide biosynthesis protein CapD; KEGG: drm:Dred_0173 shikimate/quinate 5-dehydrogenase
YP_004543837.1	KEGG: drm:Dred_0174 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein
YP_004543838.1	KEGG: drm:Dred_0175 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type
YP_004543839.1	KEGG: dae:Dtox_2003 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70
YP_004543840.1	KEGG: dae:Dtox_2005 chaperone DnaJ domain protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein
YP_004543841.1	KEGG: tjr:TherJR_0927 hypothetical protein
YP_004543842.1	TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: tjr:TherJR_0928 ATP-dependent chaperone ClpB; SMART: AAA ATPase
YP_004543843.1	PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: drm:Dred_0177 Firmicute transcriptional repressor of class III stress genes
YP_004543844.1	PFAM: UvrB/UvrC protein; KEGG: drm:Dred_0178 UvrB/UvrC protein
YP_004543845.1	PFAM: ATP:guanido phosphotransferase; KEGG: drm:Dred_0179 ATP:guanido phosphotransferase
YP_004543846.1	KEGG: drm:Dred_0180 ATPase; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase
YP_004543847.1	TIGRFAM: DNA repair protein RadA; PFAM: DnaB domain protein helicase domain protein; KEGG: drm:Dred_0182 DNA repair protein RadA; SMART: AAA ATPase
YP_004543848.1	PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; helix-hairpin-helix motif; KEGG: drm:Dred_0183 DNA integrity scanning protein DisA
YP_004543849.1	KEGG: drm:Dred_0184 hypothetical protein
YP_004543850.1	PFAM: transcription factor CarD; KEGG: drm:Dred_0185 CarD family transcriptional regulator
YP_004543851.1	KEGG: drm:Dred_0186 PilT domain-containing protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc
YP_004543852.1	KEGG: drm:Dred_0187 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_004543853.1	KEGG: drm:Dred_0188 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_004543854.1	KEGG: pth:PTH_2867 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain
YP_004543855.1	KEGG: drm:Dred_0190 hypothetical protein
YP_004543856.1	KEGG: drm:Dred_0191 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004543857.1	TIGRFAM: serine O-acetyltransferase; KEGG: drm:Dred_0192 serine O-acetyltransferase
YP_004543858.1	TIGRFAM: cysteinyl-tRNA synthetase; KEGG: drm:Dred_0193 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR
YP_004543859.1	KEGG: drm:Dred_0194 ribonuclease III; PFAM: ribonuclease III; SMART: ribonuclease III
YP_004543860.1	KEGG: drm:Dred_0195 FAD-dependent thymidylate synthase; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX
YP_004543861.1	KEGG: mgi:Mflv_4477 hypothetical protein
YP_004543862.1	KEGG: drm:Dred_0196 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding
YP_004543863.1	PFAM: protein of unknown function DUF901; KEGG: drm:Dred_0197 hypothetical protein
YP_004543864.1	manually curated; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; KEGG: drm:Dred_0198 RNA polymerase factor sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004543865.1	KEGG: drm:Dred_0213 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein
YP_004543866.1	manually curated; TIGRFAM: ribosomal protein L33; KEGG: drm:Dred_0200 50S ribosomal protein L33; PFAM: ribosomal protein L33
YP_004543867.1	KEGG: drm:Dred_0201 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein
YP_004543868.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: drm:Dred_0202 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein
YP_004543869.1	TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: drm:Dred_0203 50S ribosomal protein L11; SMART: ribosomal protein L11
YP_004543870.1	KEGG: drm:Dred_0204 ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1
YP_004543871.1	PFAM: ribosomal protein L10; KEGG: drm:Dred_0205 50S ribosomal protein L10
YP_004543872.1	KEGG: drm:Dred_0206 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12
YP_004543873.1	KEGG: drm:Dred_0207 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7
YP_004543874.1	TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: drm:Dred_0208 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein
YP_004543875.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: drm:Dred_0209 ribosomal protein L7ae family protein
YP_004543876.1	KEGG: drm:Dred_0210 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23
YP_004543877.1	KEGG: drm:Dred_0211 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7
YP_004543878.1	KEGG: drm:Dred_0212 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein
YP_004543879.1	KEGG: drm:Dred_0213 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein
YP_004543880.1	KEGG: drm:Dred_0214 ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10
YP_004543881.1	KEGG: drm:Dred_0215 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3
YP_004543882.1	PFAM: ribosomal protein L4/L1e; KEGG: drm:Dred_0216 50S ribosomal protein L4
YP_004543883.1	PFAM: Ribosomal protein L25/L23; KEGG: drm:Dred_0217 50S ribosomal protein L23
YP_004543884.1	KEGG: drm:Dred_0218 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2
YP_004543885.1	KEGG: drm:Dred_0219 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15
YP_004543886.1	KEGG: drm:Dred_0220 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17
YP_004543887.1	TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: drm:Dred_0221 30S ribosomal protein S3; SMART: KH domain protein
YP_004543888.1	KEGG: drm:Dred_0222 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_004543889.1	KEGG: drm:Dred_0223 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29
YP_004543890.1	KEGG: drm:Dred_0224 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17
YP_004543891.1	KEGG: drm:Dred_0225 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e
YP_004543892.1	TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: drm:Dred_0226 50S ribosomal protein L24; SMART: KOW domain protein
YP_004543893.1	KEGG: drm:Dred_0227 50S ribosomal protein L5
YP_004543894.1	PFAM: ribosomal protein S14; KEGG: drm:Dred_0228 ribosomal protein S14
YP_004543895.1	PFAM: ribosomal protein S8; KEGG: drm:Dred_0229 30S ribosomal protein S8
YP_004543896.1	KEGG: drm:Dred_0230 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain
YP_004543897.1	KEGG: drm:Dred_0231 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E
YP_004543898.1	KEGG: drm:Dred_0232 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein
YP_004543899.1	KEGG: drm:Dred_0233 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30
YP_004543900.1	TIGRFAM: ribosomal protein L15; KEGG: drm:Dred_0234 50S ribosomal protein L15
YP_004543901.1	KEGG: drm:Dred_0235 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein
YP_004543902.1	TIGRFAM: methionine aminopeptidase, type I; KEGG: drm:Dred_0236 methionine aminopeptidase, type I; PFAM: peptidase M24
YP_004543903.1	KEGG: drm:Dred_0237 ribosomal protein L14E
YP_004543904.1	KEGG: drm:Dred_0238 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein
YP_004543905.1	KEGG: drm:Dred_0239 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36
YP_004543906.1	KEGG: drm:Dred_0240 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13
YP_004543907.1	KEGG: drm:Dred_0241 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11
YP_004543908.1	TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: drm:Dred_0242 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein
YP_004543909.1	TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: drm:Dred_0243 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type
YP_004543910.1	KEGG: drm:Dred_0244 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17
YP_004543911.1	KEGG: drm:Dred_0245 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004543912.1	KEGG: drm:Dred_0246 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004543913.1	PFAM: cobalt transport protein; KEGG: drm:Dred_0247 cobalt transport protein
YP_004543914.1	TIGRFAM: tRNA pseudouridine synthase A; KEGG: drm:Dred_0255 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_004543915.1	KEGG: amt:Amet_4170 hypothetical protein
YP_004543916.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: dae:Dtox_0770 xanthine/uracil/vitamin C permease
YP_004543917.1	KEGG: bba:Bd3333 hypothetical protein
YP_004543918.1	PFAM: S-layer domain-containing protein; KEGG: dae:Dtox_3478 S-layer domain protein
YP_004543919.1	KEGG: gct:GC56T3_0630 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis
YP_004543920.1	KEGG: cdl:CDR20291_0581 putative transcriptional regulator; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2
YP_004543921.1	KEGG: drm:Dred_0256 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13
YP_004543922.1	PFAM: ribosomal protein S9; KEGG: drm:Dred_0257 30S ribosomal protein S9
YP_004543923.1	TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: drm:Dred_1261 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein
YP_004543924.1	KEGG: drm:Dred_0265 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_004543925.1	KEGG: drm:Dred_0266 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V
YP_004543926.1	KEGG: drm:Dred_0267 flagellar biosynthesis
YP_004543927.1	KEGG: drm:Dred_0268 hypothetical protein
YP_004543928.1	PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: drm:Dred_0269 hypothetical protein
YP_004543929.1	PFAM: Radical SAM domain protein; KEGG: drm:Dred_0270 radical SAM domain-containing protein
YP_004543930.1	TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: drm:Dred_0271 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_004543931.1	TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: drm:Dred_0272 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ
YP_004543932.1	TIGRFAM: acetylglutamate kinase; KEGG: drm:Dred_0273 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_004543933.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: drm:Dred_0274 acetylornithine aminotransferase; PFAM: aminotransferase class-III
YP_004543934.1	KEGG: drm:Dred_0275 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein
YP_004543935.1	TIGRFAM: ornithine carbamoyltransferase; KEGG: drm:Dred_0276 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain
YP_004543936.1	TIGRFAM: argininosuccinate synthase; KEGG: drm:Dred_0277 argininosuccinate synthase; PFAM: argininosuccinate synthase
YP_004543937.1	KEGG: drm:Dred_0278 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase
YP_004543938.1	KEGG: drm:Dred_0279 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein
YP_004543939.1	TIGRFAM: dihydroxy-acid dehydratase; KEGG: drm:Dred_0280 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_004543940.1	KEGG: drm:Dred_0281 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein
YP_004543941.1	TIGRFAM: acetolactate synthase, small subunit; KEGG: drm:Dred_0282 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein
YP_004543942.1	TIGRFAM: ketol-acid reductoisomerase; KEGG: drm:Dred_0283 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase
YP_004543943.1	KEGG: drm:Dred_0284 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein
YP_004543944.1	KEGG: drm:Dred_0285 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein
YP_004543945.1	KEGG: drm:Dred_0286 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein
YP_004543946.1	KEGG: drm:Dred_0287 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein
YP_004543947.1	TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: drm:Dred_0288 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_004543948.1	KEGG: drm:Dred_0289 putative alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain-containing protein; pyruvate carboxyltransferase
YP_004543949.1	KEGG: pth:PTH_1557 hypothetical protein
YP_004543950.1	PFAM: protein of unknown function DUF147; KEGG: drm:Dred_0292 hypothetical protein
YP_004543951.1	PFAM: YbbR family protein; KEGG: drm:Dred_0293 YbbR family protein
YP_004543952.1	KEGG: drm:Dred_0294 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase
YP_004543953.1	KEGG: drm:Dred_0295 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II
YP_004543954.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_1810 DNA methylase N-4/N-6 domain-containing protein
YP_004543955.1	PFAM: Restriction endonuclease BglII; KEGG: pde:Pden_3839 hypothetical protein
YP_004543956.1	KEGG: pde:Pden_3840 hypothetical protein
YP_004543957.1	KEGG: pde:Pden_3841 helicase domain-containing protein; PFAM: helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004543958.1	KEGG: pde:Pden_3842 hypothetical protein
YP_004543959.1	KEGG: nvi:100118076 hypothetical protein LOC100118076
YP_004543960.1	PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cno:NT01CX_1083 rubrerythrin
YP_004543961.1	PFAM: ferric-uptake regulator; KEGG: lba:Lebu_2013 ferric uptake regulator, Fur family
YP_004543962.1	KEGG: drm:Dred_1557 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004543963.1	KEGG: dhd:Dhaf_0271 beta-lactamase domain protein
YP_004543964.1	PFAM: 2-phosphosulfolactate phosphatase; KEGG: cno:NT01CX_0616 2-phosphosulfolactate phosphatase
YP_004543965.1	KEGG: drm:Dred_3185 putative dissimilatory sulfite reductase subunit D
YP_004543966.1	TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein
YP_004543967.1	TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: drm:Dred_3187 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region
YP_004543968.1	KEGG: clj:CLJU_c08850 putative transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH
YP_004543969.1	KEGG: dae:Dtox_1612 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004543970.1	PFAM: nitroreductase; KEGG: hmo:HM1_1491 NADH dehydrogenase/nad(p)h nitroreductase, putative
YP_004543971.1	KEGG: ckr:CKR_2566 hypothetical protein
YP_004543972.1	PFAM: metallophosphoesterase; KEGG: tjr:TherJR_2869 metallophosphoesterase
YP_004543973.1	KEGG: clj:CLJU_c26490 putative RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_004543974.1	KEGG: cbe:Cbei_0314 hypothetical protein
YP_004543975.1	KEGG: bss:BSUW23_10025 putative transcriptional regualtor; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004543976.1	KEGG: cbe:Cbei_3032 uncharacterized membrane protein
YP_004543977.1	KEGG: bcl:ABC3304 transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein
YP_004543978.1	PFAM: AzlC family protein; KEGG: afl:Aflv_0263 branched-chain amino acid permease (azaleucine resistance)
YP_004543979.1	PFAM: branched-chain amino acid transport; KEGG: afl:Aflv_0264 predicted membrane protein
YP_004543980.1	KEGG: cce:Ccel_1064 hypothetical protein
YP_004543981.1	PFAM: protein of unknown function DUF990; KEGG: cce:Ccel_2521 protein of unknown function DUF990
YP_004543982.1	PFAM: protein of unknown function DUF990; KEGG: sth:STH3203 hypothetical protein
YP_004543983.1	KEGG: sth:STH2664 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004543984.1	KEGG: drm:Dred_2781 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase
YP_004543985.1	KEGG: sth:STH2007 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004543986.1	KEGG: gct:GC56T3_1122 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004543987.1	PFAM: WD40-like beta Propeller containing protein; KEGG: pth:PTH_0765 signaling protein
YP_004543988.1	KEGG: smm:Smp_076500 dystrophin-like protein
YP_004543989.1	PFAM: Thioredoxin domain-containing protein; KEGG: dsy:DSY0659 hypothetical protein
YP_004543990.1	KEGG: aar:Acear_0225 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004543991.1	PFAM: major facilitator superfamily MFS_1; KEGG: dds:Ddes_1414 major facilitator superfamily MFS_1
YP_004543992.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dsy:DSY0730 hypothetical protein
YP_004543993.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dhd:Dhaf_4911 transcriptional regulator, LysR family
YP_004543994.1	KEGG: mpe:MYPE5360 hypothetical protein
YP_004543995.1	KEGG: dae:Dtox_4206 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004543996.1	KEGG: dae:Dtox_3501 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV
YP_004543997.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: dae:Dtox_3499 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_004543998.1	PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: drm:Dred_1113 formate dehydrogenase
YP_004543999.1	KEGG: drm:Dred_1114 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_004544000.1	KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004544001.1	PFAM: Polysulphide reductase NrfD; KEGG: drm:Dred_1116 polysulphide reductase, NrfD
YP_004544002.1	PFAM: formate dehydrogenase accessory protein; KEGG: drm:Dred_1117 hypothetical protein
YP_004544003.1	PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_0707 major facilitator transporter
YP_004544004.1	KEGG: aco:Amico_0321 protein of unknown function DUF2196; TIGRFAM: Protein of unknown function DUF2196; PFAM: Protein of unknown function DUF2196
YP_004544005.1	PFAM: regulatory protein TetR; KEGG: clj:CLJU_c10510 putative transcriptional regulator
YP_004544006.1	KEGG: tjr:TherJR_0153 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type
YP_004544007.1	KEGG: dsy:DSY4404 hypothetical protein; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase
YP_004544008.1	PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_0977 major facilitator transporter
YP_004544009.1	KEGG: drm:Dred_3224 membrane protein
YP_004544010.1	PFAM: SirA-like domain-containing protein; KEGG: pth:PTH_0551 redox protein
YP_004544011.1	KEGG: dae:Dtox_1621 hypothetical protein
YP_004544012.1	KEGG: ctc:CTC00846 metallo cofactor biosynthesis protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004544013.1	KEGG: ctc:CTC00845 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004544014.1	KEGG: bwe:BcerKBAB4_5634 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004544015.1	PFAM: peptidase M20; KEGG: toc:Toce_1998 peptidase M20
YP_004544016.1	KEGG: drm:Dred_0743 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor
YP_004544017.1	KEGG: drm:Dred_0742 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004544018.1	KEGG: bcy:Bcer98_0345 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544019.1	KEGG: drm:Dred_2811 response regulator receiver/ANTAR domain-containing protein; PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver
YP_004544020.1	PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: drm:Dred_2810 glutamate--ammonia ligase
YP_004544021.1	KEGG: drm:Dred_2809 glutamate synthase-like protein
YP_004544022.1	KEGG: sat:SYN_00075 cysteinyl-tRNA synthetase; TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004544023.1	KEGG: ani:AN3325.2 hypothetical protein
YP_004544024.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: amt:Amet_1540 YbaK/prolyl-tRNA synthetase associated region
YP_004544025.1	PFAM: VRR-NUC domain-containing protein; KEGG: cnb:CNBM2120 hypothetical protein
YP_004544026.1	KEGG: dae:Dtox_3545 small membrane protein
YP_004544027.1	KEGG: cbf:CLI_1141 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004544028.1	KEGG: tit:Thit_1060 peptidase A24A domain protein; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV
YP_004544029.1	KEGG: dau:Daud_0720 hypothetical protein
YP_004544031.1	KEGG: pca:Pcar_0865 hypothetical protein
YP_004544032.1	KEGG: dae:Dtox_3371 O-antigen polymerase
YP_004544033.1	KEGG: dae:Dtox_2669 hypothetical protein
YP_004544034.1	KEGG: dae:Dtox_2668 fimbrial assembly family protein
YP_004544035.1	KEGG: dae:Dtox_2667 hypothetical protein
YP_004544036.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: dae:Dtox_2666 twitching motility protein; SMART: AAA ATPase
YP_004544037.1	KEGG: dae:Dtox_2665 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_004544038.1	KEGG: mpi:Mpet_0661 hypothetical protein
YP_004544039.1	PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2664 type II secretion system protein
YP_004544040.1	KEGG: csc:Csac_1494 hypothetical protein
YP_004544041.1	KEGG: dhd:Dhaf_2879 hypothetical protein
YP_004544042.1	SMART: AAA ATPase; KEGG: bbe:BBR47_42920 hypothetical protein
YP_004544043.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: mta:Moth_1911 iron-containing alcohol dehydrogenase
YP_004544044.1	PFAM: amidohydrolase 2; KEGG: drm:Dred_2759 amidohydrolase 2
YP_004544045.1	KEGG: drm:Dred_2758 UbiC transcription regulator-associated domain-containing protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004544046.1	PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_5948 major facilitator transporter
YP_004544047.1	KEGG: drm:Dred_2750 formate C-acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical
YP_004544048.1	TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: drm:Dred_2752 glycyl-radical activating family protein; PFAM: Radical SAM domain protein
YP_004544049.1	KEGG: drm:Dred_1233 hypothetical protein
YP_004544050.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_2748 hypothetical protein
YP_004544051.1	PFAM: Bile acid:sodium symporter; KEGG: bmq:BMQ_3984 sodium bile acid symporter family
YP_004544052.1	KEGG: amt:Amet_1507 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004544053.1	KEGG: tjr:TherJR_2684 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544054.1	PFAM: ubiquitin-associated- domain-containing protein; KEGG: drm:Dred_1536 ubiquitin-associated domain-containing protein
YP_004544055.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: drm:Dred_1269 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein
YP_004544056.1	KEGG: amt:Amet_4666 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase
YP_004544057.1	KEGG: cdl:CDR20291_3092 hypothetical protein
YP_004544058.1	KEGG: csc:Csac_0632 hypothetical protein
YP_004544059.1	PFAM: Extracellular ligand-binding receptor; KEGG: pth:PTH_0458 ABC-type branched-chain amino acid transport systems, periplasmic component
YP_004544060.1	PFAM: inner-membrane translocator; KEGG: pth:PTH_0459 branched-chain amino acid ABC-type transport system, permease components
YP_004544061.1	PFAM: inner-membrane translocator; KEGG: pth:PTH_0460 ABC-type branched-chain amino acid transport system, permeasecomponent
YP_004544062.1	KEGG: pth:PTH_0461 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544063.1	KEGG: pth:PTH_0462 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544064.1	KEGG: ttm:Tthe_0084 hypothetical protein
YP_004544065.1	KEGG: hmo:HM1_3016 L-lactate permease family protein, putative
YP_004544066.1	PFAM: SNARE associated Golgi protein; KEGG: lmh:LMHCC_1069 DedA family protein
YP_004544067.1	KEGG: drm:Dred_0621 transporter DMT superfamily protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane
YP_004544068.1	KEGG: drm:Dred_2981 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544069.1	KEGG: drm:Dred_2980 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004544070.1	KEGG: chy:CHY_2463 hypothetical protein
YP_004544071.1	KEGG: dhd:Dhaf_2488 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004544072.1	KEGG: drm:Dred_0561 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004544073.1	PFAM: protein of unknown function DUF214; KEGG: cdl:CDR20291_0863 hypothetical protein
YP_004544074.1	KEGG: cdl:CDR20291_0862 predicted abc transporter, atpase component; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544075.1	KEGG: cdl:CDR20291_0861 sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004544076.1	KEGG: cdl:CDR20291_0860 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544077.1	KEGG: drm:Dred_3305 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004544078.1	PFAM: HI0933 family protein; KEGG: drm:Dred_0425 hypothetical protein
YP_004544079.1	KEGG: bmq:BMQ_1939 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein
YP_004544080.1	TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: cdf:CD3283 putative pyruvate formate-lyase 3 activating enzyme; PFAM: Radical SAM domain protein
YP_004544081.1	KEGG: cdl:CDR20291_3143 putative formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical
YP_004544082.1	PFAM: TfoX domain-containing protein; KEGG: mru:mru_1848 TfoX C-terminal domain-containing protein
YP_004544083.1	KEGG: ctc:CTC01889 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004544084.1	KEGG: pth:PTH_0886 hypothetical protein
YP_004544085.1	PFAM: protein of unknown function DUF1540; KEGG: dae:Dtox_0890 protein of unknown function DUF1540
YP_004544086.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dae:Dtox_3831 NADH dehydrogenase (ubiquinone) 24 kDa subunit
YP_004544087.1	KEGG: pth:PTH_1378 NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004544088.1	KEGG: pth:PTH_1377 hydrogenase subunit; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit
YP_004544089.1	KEGG: hau:Haur_0091 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004544090.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dae:Dtox_4297 GCN5-related N-acetyltransferase
YP_004544091.1	KEGG: drm:Dred_2301 extracellular solute-binding protein
YP_004544092.1	KEGG: pth:PTH_0603 ABC-type tungstate transport system, permease component
YP_004544093.1	PFAM: molybdopterin binding domain; KEGG: pth:PTH_0688 hypothetical protein
YP_004544094.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; [2Fe-2S]-binding domain-containing protein; ferredoxin; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dae:Dtox_3440 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_004544096.1	PFAM: amine oxidase; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pth:PTH_0680 hypothetical protein
YP_004544097.1	KEGG: dae:Dtox_3438 hypothetical protein
YP_004544098.1	PFAM: Methyltransferase type 11; KEGG: pth:PTH_0682 hypothetical protein
YP_004544099.1	KEGG: pth:PTH_0683 hypothetical protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein
YP_004544100.1	PFAM: Radical SAM domain protein; KEGG: pth:PTH_0684 Fe-S oxidoreductases
YP_004544101.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pth:PTH_0685 coenzyme F390 synthetase
YP_004544102.1	PFAM: protein of unknown function DUF182; KEGG: pth:PTH_0686 xanthine and CO dehydrogenases maturation factor
YP_004544103.1	KEGG: gur:Gura_1006 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004544104.1	KEGG: pth:PTH_0689 fructose-2,6-bisphosphatase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase
YP_004544105.1	PFAM: Phosphoglycerate mutase; KEGG: pth:PTH_0689 fructose-2,6-bisphosphatase
YP_004544106.1	KEGG: dae:Dtox_3452 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1
YP_004544107.1	PFAM: TOBE domain-containing protein; KEGG: dae:Dtox_3442 TOBE domain protein
YP_004544108.1	KEGG: pth:PTH_0675 ABC-type molybdate transport system, periplasmic component; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1
YP_004544109.1	KEGG: dae:Dtox_3445 molybdate ABC transporter, inner membrane subunit; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004544110.1	KEGG: pth:PTH_0677 ABC-type molybdate transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544111.1	KEGG: bfo:BRAFLDRAFT_287284 hypothetical protein
YP_004544112.1	KEGG: drm:Dred_1731 putative delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase
YP_004544113.1	KEGG: lbl:LBL_4092 hypothetical protein
YP_004544114.1	KEGG: npu:Npun_ER005 relaxase/mobilization nuclease family protein
YP_004544115.1	PFAM: Rubrerythrin; KEGG: amt:Amet_4259 rubrerythrin
YP_004544116.1	PFAM: Bacitracin resistance protein BacA; KEGG: drm:Dred_0427 undecaprenyl pyrophosphate phosphatase
YP_004544117.1	PFAM: protein of unknown function DUF1624; KEGG: drm:Dred_0429 hypothetical protein
YP_004544118.1	manually curated; KEGG: cth:Cthe_0359 hypothetical protein
YP_004544119.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bbe:BBR47_46110 putative dehydrogenase
YP_004544120.1	KEGG: spu:753956 hypothetical protein LOC753956
YP_004544121.1	KEGG: sth:STH1375 hypothetical protein
YP_004544122.1	KEGG: swo:Swol_0058 glycosyltransferase-like protein
YP_004544123.1	KEGG: drm:Dred_3217 STE24 endopeptidase; PFAM: peptidase M48 Ste24p
YP_004544124.1	PFAM: aminotransferase class I and II; KEGG: drm:Dred_2905 GntR family transcriptional regulator
YP_004544125.1	KEGG: dal:Dalk_4103 protein of unknown function DUF1291
YP_004544126.1	KEGG: gbm:Gbem_1226 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004544127.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: drm:Dred_1532 cytochrome c biogenesis protein, transmembrane region
YP_004544128.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ttr:Tter_0805 Glu/Leu/Phe/Val dehydrogenase
YP_004544129.1	PFAM: TrkA-C domain protein; KEGG: dae:Dtox_3238 TrkA-C domain protein
YP_004544130.1	PFAM: sodium/hydrogen exchanger; KEGG: drm:Dred_1518 sodium/hydrogen exchanger
YP_004544131.1	KEGG: drm:Dred_2970 histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein
YP_004544132.1	PFAM: AMP-dependent synthetase and ligase; KEGG: drm:Dred_2963 AMP-dependent synthetase and ligase
YP_004544133.1	KEGG: drm:Dred_2960 hypothetical protein
YP_004544134.1	KEGG: drm:Dred_2959 hypothetical protein
YP_004544135.1	KEGG: pth:PTH_2207 amino acid transporters
YP_004544136.1	KEGG: drm:Dred_2201 hypothetical protein
YP_004544137.1	PFAM: NIPSNAP family containing protein; KEGG: rhi:NGR_c36880 NIPSNAP family containing protein
YP_004544138.1	KEGG: toc:Toce_1956 transposase IS3/IS911 family protein
YP_004544139.1	PFAM: Beta propeller domain; KEGG: dae:Dtox_3362 C-terminal beta-propeller domain-contain secreted protein-like protein
YP_004544140.1	KEGG: drm:Dred_2906 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH
YP_004544141.1	PFAM: Ankyrin; KEGG: spu:585023 similar to NACHT domain protein, putative
YP_004544142.1	PFAM: Bile acid:sodium symporter; KEGG: tjr:TherJR_1578 bile acid:sodium symporter
YP_004544143.1	KEGG: drm:Dred_1693 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004544144.1	KEGG: dau:Daud_1998 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004544145.1	KEGG: dau:Daud_1553 hypothetical protein
YP_004544146.1	PFAM: VanZ family protein; KEGG: drm:Dred_2961 hypothetical protein
YP_004544147.1	PFAM: protein of unknown function DUF218; KEGG: tjr:TherJR_1014 protein of unknown function DUF218
YP_004544148.1	KEGG: dae:Dtox_2271 hypothetical protein
YP_004544149.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: sth:STH940 G/U mismatch-specific DNA glycosylase
YP_004544150.1	PFAM: transcriptional regulator PadR family protein; KEGG: dau:Daud_0311 PadR-like family transcriptional regulator
YP_004544151.1	KEGG: dau:Daud_0310 ABC-transporter-like protein, periplasmic substrate-binding protein
YP_004544152.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2674 iron-containing alcohol dehydrogenase
YP_004544153.1	KEGG: drm:Dred_2751 UbiC transcription regulator-associated domain-containing protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004544154.1	KEGG: dvm:DvMF_0518 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544155.1	SMART: extracellular solute-binding protein family 3; KEGG: dvm:DvMF_0519 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
YP_004544156.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_0520 binding-protein-dependent transport systems inner membrane component
YP_004544157.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_0521 binding-protein-dependent transport systems inner membrane component
YP_004544158.1	KEGG: dvm:DvMF_0522 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544159.1	TIGRFAM: alanine dehydrogenase; KEGG: drm:Dred_2866 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein
YP_004544160.1	PFAM: aminotransferase class-III; KEGG: dvm:DvMF_0516 aminotransferase class-III
YP_004544161.1	KEGG: dhd:Dhaf_4634 sulfoacetaldehyde acetyltransferase; TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein
YP_004544162.1	PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH0472 hypothetical protein
YP_004544163.1	KEGG: ptm:GSPATT00013381001 hypothetical protein
YP_004544164.1	KEGG: dae:Dtox_1608 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004544165.1	KEGG: dae:Dtox_1609 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane
YP_004544166.1	PFAM: malic protein NAD-binding; malic protein domain protein; amino acid-binding ACT domain protein; KEGG: drm:Dred_2955 malate dehydrogenase
YP_004544167.1	PFAM: regulatory protein TetR; KEGG: dsy:DSY2070 hypothetical protein
YP_004544168.1	KEGG: drm:Dred_2954 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004544169.1	PFAM: acriflavin resistance protein; KEGG: drm:Dred_2953 acriflavin resistance protein
YP_004544170.1	PFAM: sodium:dicarboxylate symporter; KEGG: aav:Aave_3501 C4-dicarboxylate transporter DctA
YP_004544171.1	KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein
YP_004544172.1	PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein
YP_004544173.1	KEGG: drm:Dred_2952 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein
YP_004544174.1	KEGG: drm:Dred_2951 hypothetical protein
YP_004544175.1	PFAM: acriflavin resistance protein; KEGG: drm:Dred_2950 acriflavin resistance protein
YP_004544176.1	KEGG: drm:Dred_2949 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004544177.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator QacR-related domain-containing protein; KEGG: dae:Dtox_1941 transcriptional regulator, TetR family
YP_004544178.1	KEGG: cbi:CLJ_B0745 hypothetical protein
YP_004544179.1	PFAM: protein of unknown function DUF81; KEGG: bca:BCE_1737 hypothetical protein
YP_004544180.1	KEGG: drm:Dred_1810 hexokinase; PFAM: hexokinase
YP_004544181.1	PFAM: HPP family protein; KEGG: drm:Dred_2943 HPP family protein+B94
YP_004544182.1	KEGG: slp:Slip_0935 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_004544183.1	KEGG: dae:Dtox_2140 rubrerythrin
YP_004544184.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: drm:Dred_2941 rubredoxin-type Fe(Cys)4 protein
YP_004544185.1	PFAM: alpha/beta hydrolase fold; KEGG: jde:Jden_2389 alpha/beta hydrolase fold protein
YP_004544186.1	KEGG: drm:Dred_2939 putative RNA methylase; PFAM: RNA methylase; THUMP domain-containing protein
YP_004544187.1	KEGG: drm:Dred_2937 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004544188.1	PFAM: protein of unknown function DUF1540; KEGG: nth:Nther_0851 protein of unknown function DUF1540
YP_004544189.1	KEGG: drm:Dred_2936 hypothetical protein
YP_004544190.1	PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: drm:Dred_1495 bifunctional acetaldehyde-CoA/alcohol dehydrogenase
YP_004544191.1	PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: drm:Dred_2929 heat domain-containing protein
YP_004544192.1	KEGG: drm:Dred_2928 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004544193.1	KEGG: dae:Dtox_1572 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544194.1	PFAM: protein of unknown function DUF214; KEGG: swo:Swol_2458 hypothetical protein
YP_004544195.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_2925 hypothetical protein
YP_004544196.1	KEGG: drm:Dred_2924 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_004544197.1	KEGG: drm:Dred_2923 hypothetical protein
YP_004544200.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bth:BT_1384 hypothetical protein
YP_004544201.1	KEGG: cbf:CLI_1777 leucine-rich repeat-containing protein
YP_004544202.1	KEGG: gga:420294 similar to cylindromatosis (turban tumor syndrome); cylindromatosis 1, turban tumor syndrome
YP_004544203.1	KEGG: drm:Dred_1378 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein
YP_004544204.1	PFAM: Methyltransferase type 11; KEGG: dhd:Dhaf_1942 methyltransferase type 11
YP_004544205.1	KEGG: drm:Dred_0386 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase
YP_004544206.1	KEGG: drm:Dred_0398 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_004544207.1	KEGG: bfo:BRAFLDRAFT_217793 hypothetical protein
YP_004544208.1	KEGG: ptr:745338 hypothetical protein LOC745338
YP_004544209.1	KEGG: drm:Dred_2918 hypothetical protein
YP_004544210.1	PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2917 S-layer domain-containing protein
YP_004544211.1	KEGG: drm:Dred_2916 hypothetical protein
YP_004544212.1	SMART: helix-turn-helix domain protein; KEGG: drm:Dred_2915 XRE family transcriptional regulator
YP_004544213.1	manually curated; KEGG: drm:Dred_2914 hypothetical protein
YP_004544214.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: drm:Dred_2913 2-nitropropane dioxygenase, NPD
YP_004544215.1	PFAM: manganese containing catalase; KEGG: drm:Dred_2909 manganese containing catalase
YP_004544216.1	KEGG: cme:CMR168C hypothetical protein
YP_004544217.1	KEGG: cci:CC1G_00839 atypical/PIKK/ATM protein kinase
YP_004544218.1	KEGG: bfo:BRAFLDRAFT_80349 hypothetical protein
YP_004544219.1	KEGG: mmu:268379 ATP-binding cassette, sub-family A (ABC1), member 13
YP_004544220.1	KEGG: dae:Dtox_2514 hypothetical protein
YP_004544221.1	KEGG: mta:Moth_0304 hypothetical protein
YP_004544222.1	KEGG: dae:Dtox_1401 hypothetical protein
YP_004544223.1	KEGG: dae:Dtox_2510 hypothetical protein
YP_004544224.1	KEGG: dae:Dtox_2509 hypothetical protein
YP_004544225.1	KEGG: dae:Dtox_2508 hypothetical protein
YP_004544226.1	KEGG: dae:Dtox_2507 hypothetical protein
YP_004544227.1	PFAM: Peptidase M23; Lytic transglycosylase catalytic; KEGG: dae:Dtox_2504 peptidase M23
YP_004544228.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: drm:Dred_0799 diguanylate cyclase; SMART: GGDEF domain containing protein
YP_004544229.1	KEGG: drm:Dred_0800 chromosome partitioning ATPase protein-like protein
YP_004544230.1	KEGG: drm:Dred_0801 hypothetical protein
YP_004544231.1	PFAM: SAF domain protein; KEGG: drm:Dred_0804 hypothetical protein
YP_004544232.1	KEGG: adg:Adeg_0779 chromosome partitioning ATPase
YP_004544233.1	PFAM: type II secretion system protein E; KEGG: bbe:BBR47_05700 hypothetical protein
YP_004544234.1	PFAM: Type II secretion system F domain; KEGG: aco:Amico_1198 type II secretion system F domain protein
YP_004544235.1	PFAM: Type II secretion system F domain; KEGG: nth:Nther_2314 type II secretion system protein
YP_004544236.1	KEGG: adg:Adeg_0789 hypothetical protein
YP_004544237.1	PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: mta:Moth_1550 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A
YP_004544238.1	KEGG: ere:EUBREC_1143 methyl-accepting chemotaxis protein
YP_004544239.1	PFAM: TadE family protein; KEGG: dae:Dtox_2479 TadE family protein
YP_004544240.1	KEGG: drm:Dred_0810 hypothetical protein
YP_004544241.1	KEGG: oaa:100092213 hypothetical protein LOC100092213
YP_004544242.1	KEGG: drm:Dred_0812 hypothetical protein
YP_004544243.1	KEGG: tet:TTHERM_00697530 TBC domain containing protein
YP_004544244.1	KEGG: drm:Dred_0820 Ig domain-containing protein
YP_004544245.1	KEGG: drm:Dred_0821 hypothetical protein
YP_004544246.1	KEGG: drm:Dred_0812 hypothetical protein
YP_004544247.1	TIGRFAM: prevent-host-death family protein; KEGG: dau:Daud_2131 prevent-host-death family protein
YP_004544248.1	KEGG: dau:Daud_2130 PilT domain-containing protein
YP_004544249.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_0939 copper amine oxidase domain-containing protein
YP_004544250.1	KEGG: drm:Dred_0820 Ig domain-containing protein
YP_004544251.1	KEGG: drm:Dred_0821 hypothetical protein
YP_004544252.1	KEGG: drm:Dred_0821 hypothetical protein
YP_004544253.1	KEGG: drm:Dred_0836 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein
YP_004544254.1	KEGG: drm:Dred_0837 hypothetical protein
YP_004544255.1	KEGG: adg:Adeg_0813 hypothetical protein
YP_004544256.1	KEGG: mta:Moth_1573 hypothetical protein
YP_004544257.1	KEGG: drm:Dred_0973 hypothetical protein
YP_004544258.1	KEGG: nvi:100120404 similar to pom1
YP_004544259.1	manually curated; KEGG: drm:Dred_0839 hypothetical protein
YP_004544260.1	KEGG: drm:Dred_0840 hypothetical protein
YP_004544261.1	KEGG: drm:Dred_0841 hypothetical protein
YP_004544262.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0842 membrane-bound metal-dependent hydrolase
YP_004544263.1	PFAM: TRAG family protein; KEGG: drm:Dred_0843 TraG family protein
YP_004544264.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0844 membrane-bound metal-dependent hydrolase
YP_004544265.1	KEGG: drm:Dred_0845 RNA-binding S1 domain-containing protein
YP_004544266.1	KEGG: drm:Dred_0846 hypothetical protein
YP_004544267.1	KEGG: drm:Dred_0848 hypothetical protein
YP_004544268.1	KEGG: drm:Dred_0849 hypothetical protein
YP_004544269.1	manually curated; KEGG: drm:Dred_0988 hypothetical protein
YP_004544270.1	KEGG: nve:NEMVE_v1g91406 hypothetical protein
YP_004544271.1	KEGG: cyp:PCC8801_4537 GCN5-related N-acetyltransferase
YP_004544272.1	KEGG: drm:Dred_0854 hypothetical protein
YP_004544273.1	KEGG: drm:Dred_0855 glutamine amidotransferase, class-II
YP_004544274.1	KEGG: drm:Dred_0856 hypothetical protein
YP_004544275.1	KEGG: tel:tlr0420 hypothetical protein
YP_004544276.1	PFAM: integrase family protein; KEGG: dae:Dtox_1846 integrase family protein
YP_004544278.1	KEGG: dae:Dtox_3723 transcriptional regulator, XRE family
YP_004544279.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: dae:Dtox_3724 cell divisionFtsK/SpoIIIE
YP_004544280.1	manually curated; KEGG: dae:Dtox_3725 hypothetical protein
YP_004544281.1	KEGG: dae:Dtox_3726 hypothetical protein
YP_004544283.1	KEGG: drm:Dred_0889 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004544284.1	KEGG: drm:Dred_0891 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004544285.1	KEGG: mcc:715535 similar to Synaptic vesicle membrane protein VAT-1 homolog
YP_004544286.1	KEGG: drm:Dred_0889 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004544287.1	KEGG: clj:CLJU_c00220 putative phage protein with HTH motif; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004544288.1	KEGG: drm:Dred_0892 cobyrinic acid a,c-diamide synthase
YP_004544289.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: drm:Dred_0893 ParB-like partition protein; SMART: ParB domain protein nuclease
YP_004544290.1	KEGG: drm:Dred_0895 hypothetical protein
YP_004544291.1	KEGG: pdi:BDI_0889 hypothetical protein
YP_004544292.1	KEGG: mmy:MSC_0061 prolipoprotein
YP_004544293.1	PFAM: Resolvase domain; Recombinase; KEGG: dae:Dtox_2966 resolvase domain protein
YP_004544294.1	PFAM: manganese containing catalase; KEGG: drm:Dred_2909 manganese containing catalase
YP_004544295.1	KEGG: drm:Dred_2908 spore coat peptide assembly protein cotJB
YP_004544296.1	KEGG: drm:Dred_2907 hypothetical protein
YP_004544297.1	PFAM: phosphoglucose isomerase (PGI); KEGG: drm:Dred_2902 glucose-6-phosphate isomerase
YP_004544298.1	KEGG: drm:Dred_2901 hypothetical protein
YP_004544299.1	PFAM: Rhomboid family protein; KEGG: drm:Dred_2900 rhomboid family protein
YP_004544300.1	KEGG: drm:Dred_2899 hypothetical protein
YP_004544301.1	PFAM: GCN5-related N-acetyltransferase; KEGG: drm:Dred_2898 acetyltransferase
YP_004544302.1	KEGG: drm:Dred_2897 hypothetical protein
YP_004544303.1	KEGG: drm:Dred_2896 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein
YP_004544304.1	KEGG: drm:Dred_2895 CopG family transcriptional regulator
YP_004544305.1	PFAM: PemK family protein; KEGG: drm:Dred_2894 transcriptional modulator of MazE/toxin, MazF
YP_004544306.1	PFAM: peptidase C26; KEGG: drm:Dred_2893 peptidase C26
YP_004544307.1	PFAM: amidohydrolase; KEGG: drm:Dred_2892 amidohydrolase
YP_004544308.1	KEGG: drm:Dred_2891 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004544309.1	PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: drm:Dred_2888 hypothetical protein
YP_004544310.1	PFAM: peptidase M22 glycoprotease; KEGG: drm:Dred_2887 peptidase M22, glycoprotease
YP_004544311.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: drm:Dred_2886 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004544312.1	TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: drm:Dred_2885 metalloendopeptidase glycoprotease family; PFAM: peptidase M22 glycoprotease
YP_004544313.1	KEGG: drm:Dred_2884 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_004544314.1	PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_2883 amino acid-binding ACT domain-containing protein
YP_004544315.1	KEGG: drm:Dred_2882 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004544316.1	PFAM: protein of unknown function DUF583; KEGG: hmu:Hmuk_1143 protein of unknown function DUF583
YP_004544317.1	KEGG: nth:Nther_1893 putative transmembrane anti-sigma factor
YP_004544318.1	KEGG: sth:STH845 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004544319.1	PFAM: Radical SAM domain protein; KEGG: drm:Dred_2881 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004544320.1	KEGG: drm:Dred_2880 hypothetical protein
YP_004544321.1	KEGG: drm:Dred_2879 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV
YP_004544322.1	KEGG: drm:Dred_2878 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV
YP_004544323.1	PFAM: regulatory protein LysR; KEGG: drm:Dred_2877 ModE family transcriptional regulator
YP_004544324.1	KEGG: drm:Dred_2876 formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD
YP_004544325.1	KEGG: drm:Dred_2875 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain
YP_004544326.1	PFAM: Chaperonin Cpn10; KEGG: drm:Dred_2874 chaperonin Cpn10
YP_004544327.1	KEGG: drm:Dred_2873 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1
YP_004544328.1	KEGG: drm:Dred_2871 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004544329.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; KEGG: dae:Dtox_1949 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_004544330.1	KEGG: chy:CHY_0659 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_004544331.1	KEGG: dau:Daud_0468 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004544332.1	KEGG: tjr:TherJR_0652 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver
YP_004544333.1	KEGG: drm:Dred_2868 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase
YP_004544334.1	KEGG: drm:Dred_2867 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031
YP_004544335.1	SMART: TIR protein; KEGG: tcx:Tcr_0366 hypothetical protein
YP_004544336.1	KEGG: bmq:BMQ_3622 endoribonuclease L-PSP, putative; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP
YP_004544337.1	TIGRFAM: methylglyoxal synthase; KEGG: cno:NT01CX_1696 methylglyoxal synthase; PFAM: MGS domain protein
YP_004544338.1	KEGG: gym:GYMC10_3132 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544339.1	KEGG: gym:GYMC10_3131 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004544340.1	KEGG: sli:Slin_2704 peptidase S9 prolyl oligopeptidase active site domain protein
YP_004544341.1	KEGG: dae:Dtox_1722 hypothetical protein
YP_004544342.1	KEGG: dhd:Dhaf_2143 hypothetical protein
YP_004544343.1	KEGG: tjr:TherJR_0277 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004544344.1	KEGG: drm:Dred_1591 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_004544345.1	KEGG: drm:Dred_0359 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; AAA ATPase
YP_004544346.1	KEGG: str:Sterm_2301 hypothetical protein
YP_004544347.1	PFAM: transposase IS4 family protein; KEGG: toc:Toce_1418 transposase IS4 family protein
YP_004544348.1	KEGG: bld:BLi02545 hypothetical protein
YP_004544349.1	TIGRFAM: alanine racemase; KEGG: drm:Dred_2865 alanine racemase; PFAM: alanine racemase domain protein
YP_004544350.1	KEGG: drm:Dred_2864 Fis family transcriptional regulator; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver
YP_004544351.1	PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2863 nitrogen regulatory protein P-II
YP_004544352.1	KEGG: drm:Dred_2862 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter
YP_004544353.1	PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2861 nitrogen regulatory protein P-II
YP_004544354.1	PFAM: S-layer domain-containing protein; Propeptide PepSY amd peptidase M4; KEGG: drm:Dred_2860 S-layer domain-containing protein
YP_004544355.1	PFAM: glycosyl transferase family 2; KEGG: drm:Dred_2859 glycosyl transferase family protein
YP_004544356.1	PFAM: metallophosphoesterase; KEGG: drm:Dred_2858 metallophosphoesterase
YP_004544357.1	KEGG: drm:Dred_2857 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004544358.1	TIGRFAM: metal dependent phophohydrolase; PAS sensor protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold domain protein; KEGG: drm:Dred_2856 putative PAS/PAC sensor protein; SMART: metal-dependent phosphohydrolase HD region
YP_004544359.1	PFAM: polysaccharide deacetylase; KEGG: gtn:GTNG_3405 polysaccharide deacetylase, putative
YP_004544360.1	KEGG: drm:Dred_2855 hypothetical protein
YP_004544361.1	KEGG: drm:Dred_2854 hypothetical protein; PFAM: protein of unknown function DUF815; AAA ATPase central domain protein; SMART: AAA ATPase
YP_004544362.1	PFAM: FMN-binding domain protein; S-layer domain-containing protein; KEGG: cce:Ccel_2338 hypothetical protein
YP_004544363.1	PFAM: ApbE family lipoprotein; KEGG: swo:Swol_1956 thiamine biosynthesis lipoprotein
YP_004544364.1	PFAM: protein of unknown function DUF1312; KEGG: clj:CLJU_c11430 hypothetical protein
YP_004544365.1	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: ctc:CTC01025 heptaprenyl diphosphate synthase component I
YP_004544366.1	PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region
YP_004544367.1	KEGG: toc:Toce_1956 transposase IS3/IS911 family protein
YP_004544368.1	PFAM: helix-turn-helix HxlR type; KEGG: dhd:Dhaf_0518 transcriptional regulator, HxlR family
YP_004544369.1	KEGG: dhd:Dhaf_0517 hypothetical protein
YP_004544370.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mgm:Mmc1_3048 C4-dicarboxylate transporter/malic acid transport protein
YP_004544371.1	PFAM: transcriptional regulator PadR family protein; KEGG: amt:Amet_1565 PadR-like family transcriptional regulator
YP_004544372.1	PFAM: helix-turn-helix HxlR type; KEGG: toc:Toce_1961 transcriptional regulator
YP_004544373.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ttm:Tthe_0878 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_004544374.1	PFAM: flagellin domain protein; KEGG: cbk:CLL_A3427 flagellin
YP_004544375.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: pth:PTH_1778 membrane signaling protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_004544377.1	KEGG: drm:Dred_2848 hypothetical protein
YP_004544378.1	KEGG: dae:Dtox_0049 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004544379.1	KEGG: drm:Dred_1262 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004544380.1	PFAM: sodium/sulphate symporter; KEGG: dau:Daud_0787 sodium/sulphate symporter
YP_004544381.1	PFAM: HI0933 family protein; KEGG: dau:Daud_0788 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
YP_004544382.1	KEGG: dau:Daud_0789 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004544383.1	PFAM: S-layer domain-containing protein; KEGG: swo:Swol_1184 hypothetical protein
YP_004544384.1	KEGG: drm:Dred_2826 hypothetical protein
YP_004544385.1	KEGG: dau:Daud_1560 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein
YP_004544386.1	KEGG: drm:Dred_2263 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004544387.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: pin:Ping_0949 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_004544388.1	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: drm:Dred_2812 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II
YP_004544389.1	KEGG: drm:Dred_2808 response regulator receiver/ANTAR domain-containing protein; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver
YP_004544390.1	TIGRFAM: glutamine synthetase, type I; KEGG: drm:Dred_2807 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_004544391.1	KEGG: drm:Dred_2806 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_004544392.1	KEGG: drm:Dred_2805 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein
YP_004544393.1	KEGG: drm:Dred_2804 glutamate synthases, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004544394.1	PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region
YP_004544395.1	KEGG: toc:Toce_1956 transposase IS3/IS911 family protein
YP_004544396.1	KEGG: drm:Dred_2803 hypothetical protein
YP_004544398.1	KEGG: drm:Dred_2802 hypothetical protein
YP_004544399.1	KEGG: drm:Dred_2801 hypothetical protein
YP_004544400.1	KEGG: drm:Dred_2800 hypothetical protein
YP_004544401.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: drm:Dred_2799 endonuclease/exonuclease/phosphatase
YP_004544402.1	KEGG: drm:Dred_2798 cell wall hydrolase, SleB; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004544403.1	PFAM: Lactate/malate dehydrogenase; KEGG: drm:Dred_2797 L-lactate dehydrogenase
YP_004544404.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pjd:Pjdr2_0549 MscS mechanosensitive ion channel
YP_004544405.1	KEGG: dsy:DSY2713 hypothetical protein
YP_004544406.1	KEGG: dhd:Dhaf_3871 hypothetical protein
YP_004544407.1	KEGG: dsy:DSY2711 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544408.1	KEGG: dhd:Dhaf_3869 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544409.1	KEGG: dhd:Dhaf_3868 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004544410.1	PFAM: protein of unknown function DUF1113; KEGG: cpf:CPF_1398 hypothetical protein
YP_004544411.1	PFAM: regulatory protein TetR; KEGG: tte:TTE1839 transcriptional regulator
YP_004544412.1	PFAM: heat shock protein Hsp20; KEGG: apv:Apar_0104 heat shock protein HSP20
YP_004544413.1	KEGG: rci:RRC2 redox-active protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein
YP_004544414.1	KEGG: cac:CA_C0449 hypothetical protein
YP_004544415.1	KEGG: drm:Dred_0385 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004544416.1	PFAM: Protein of unknown function DUF2164; KEGG: drm:Dred_2026 hypothetical protein
YP_004544417.1	KEGG: drt:Dret_1645 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544418.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drt:Dret_1646 binding-protein-dependent transport systems inner membrane component
YP_004544419.1	SMART: extracellular solute-binding protein family 3; KEGG: slp:Slip_1328 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein
YP_004544420.1	KEGG: drm:Dred_2745 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein
YP_004544421.1	KEGG: tjr:TherJR_2968 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp
YP_004544422.1	TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: tjr:TherJR_1937 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane
YP_004544423.1	KEGG: chy:CHY_1834 CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC
YP_004544424.1	PFAM: nitroreductase; KEGG: ckr:CKR_1145 hypothetical protein
YP_004544425.1	PFAM: protein of unknown function DUF45; KEGG: drm:Dred_2744 hypothetical protein
YP_004544426.1	KEGG: drm:Dred_2743 hypothetical protein
YP_004544427.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ckr:CKR_3387 hypothetical protein
YP_004544428.1	PFAM: sodium:neurotransmitter symporter; KEGG: drm:Dred_2742 sodium:neurotransmitter symporter
YP_004544429.1	KEGG: drm:Dred_2741 phospholipase C zinc-binding protein; PFAM: phospholipase C zinc-binding protein; SMART: phospholipase C zinc-binding protein
YP_004544430.1	KEGG: drm:Dred_2739 NLP/P60 protein; PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004544431.1	PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2738 S-layer domain-containing protein
YP_004544432.1	KEGG: drm:Dred_2737 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004544433.1	PFAM: Lipoprotein LpqB, GerMN domain; KEGG: drm:Dred_2736 hypothetical protein
YP_004544434.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; KEGG: dae:Dtox_1659 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein
YP_004544435.1	KEGG: drm:Dred_2726 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004544436.1	PFAM: FeoA family protein; KEGG: drm:Dred_2725 FeoA family protein
YP_004544437.1	PFAM: FeoA family protein; KEGG: dae:Dtox_1656 FeoA family protein
YP_004544438.1	KEGG: drm:Dred_2723 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein
YP_004544439.1	KEGG: dae:Dtox_1658 hypothetical protein
YP_004544440.1	KEGG: bha:BH2016 hypothetical protein
YP_004544441.1	KEGG: ckr:CKR_1037 hypothetical protein
YP_004544442.1	KEGG: lba:Lebu_2038 hypothetical protein
YP_004544443.1	KEGG: fnu:FN1190 cadmium-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004544444.1	KEGG: bmd:BMD_1818 hypothetical protein
YP_004544445.1	KEGG: bmq:BMQ_pBM40025 hypothetical protein
YP_004544446.1	KEGG: drm:Dred_2722 hypothetical protein
YP_004544447.1	TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: ckr:CKR_1636 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein
YP_004544448.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aoe:Clos_2696 short-chain dehydrogenase/reductase SDR
YP_004544449.1	KEGG: gsu:GSU1030 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004544450.1	KEGG: drm:Dred_2735 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004544451.1	KEGG: drm:Dred_2730 anaerobic cobalt chelatase; PFAM: anaerobic cobalt chelatase
YP_004544452.1	TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: drm:Dred_2728 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_004544453.1	KEGG: drm:Dred_2721 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor
YP_004544454.1	PFAM: Ferrous iron transport B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport protein B domain-containing protein; KEGG: drm:Dred_2720 ferrous iron transport B domain-containing protein
YP_004544455.1	KEGG: drm:Dred_2719 GTP-binding protein, HSR1-related; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein
YP_004544456.1	PFAM: FeoA family protein; KEGG: drm:Dred_2718 FeoA family protein
YP_004544457.1	PFAM: YibE/F family protein; KEGG: drm:Dred_2717 YibE/F family protein
YP_004544458.1	KEGG: drm:Dred_2722 hypothetical protein
YP_004544459.1	KEGG: drm:Dred_2716 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase
YP_004544460.1	KEGG: drm:Dred_2715 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_004544461.1	KEGG: drm:Dred_2714 cobalt-precorrin-6A synthase; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein
YP_004544462.1	KEGG: drm:Dred_2713 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004544463.1	KEGG: drm:Dred_2712 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Methyltransferase type 12
YP_004544464.1	TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: drm:Dred_2711 precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004544465.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: drm:Dred_2710 cobalamin (vitamin B12) biosynthesis CbiG protein
YP_004544466.1	KEGG: drm:Dred_2709 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004544467.1	KEGG: drm:Dred_2708 precorrin-6X reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK
YP_004544468.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: drm:Dred_2707 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_004544469.1	KEGG: drm:Dred_2706 precorrin-8X methylmutase CbiC/CobH; PFAM: Precorrin-8X methylmutase CbiC/CobH
YP_004544470.1	KEGG: drm:Dred_2705 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_004544471.1	KEGG: drm:Dred_2704 cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB
YP_004544472.1	KEGG: drm:Dred_2703 cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS
YP_004544473.1	PFAM: GHMP kinase; KEGG: drm:Dred_2702 GHMP kinase
YP_004544474.1	KEGG: drm:Dred_2701 putative L-threonine-O-3-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II
YP_004544475.1	SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: drm:Dred_2700 diguanylate cyclase; PFAM: GGDEF domain containing protein
YP_004544476.1	KEGG: pth:PTH_2016 hypothetical protein; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase
YP_004544477.1	KEGG: dae:Dtox_2083 DSH domain protein; PFAM: DSH domain protein; helicase domain protein; SMART: helicase domain protein
YP_004544478.1	PFAM: protein of unknown function DUF541; KEGG: drm:Dred_1567 hypothetical protein
YP_004544479.1	PFAM: SCP-like extracellular; KEGG: drm:Dred_1374 allergen V5/TPX-1 family protein
YP_004544480.1	KEGG: drm:Dred_2697 hypothetical protein
YP_004544481.1	PFAM: S-layer domain-containing protein; KEGG: mta:Moth_2088 hypothetical protein
YP_004544482.1	KEGG: drm:Dred_2696 hypothetical protein
YP_004544483.1	KEGG: drm:Dred_2695 hypothetical protein
YP_004544484.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: drm:Dred_2694 ErfK/YbiS/YcfS/YnhG family protein
YP_004544485.1	PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; KEGG: drm:Dred_2693 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SH3 domain protein
YP_004544486.1	TIGRFAM: methylaspartate mutase, S subunit; KEGG: drm:Dred_2692 methylaspartate mutase subunit S; PFAM: cobalamin B12-binding domain protein
YP_004544487.1	KEGG: drm:Dred_2691 glutamate mutase, MutL
YP_004544488.1	TIGRFAM: methylaspartate mutase, E subunit; KEGG: drm:Dred_2690 methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit
YP_004544489.1	TIGRFAM: methylaspartate ammonia-lyase; KEGG: drm:Dred_2689 methylaspartate ammonia-lyase; PFAM: methylaspartate ammonia-lyase
YP_004544490.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_2688 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_004544491.1	KEGG: drm:Dred_2687 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type
YP_004544492.1	KEGG: drm:Dred_2686 beta-lactamase domain-containing protein
YP_004544493.1	KEGG: drm:Dred_2685 hypothetical protein
YP_004544494.1	TIGRFAM: ribonuclease PH; KEGG: drm:Dred_2684 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
YP_004544495.1	KEGG: drm:Dred_2683 nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein
YP_004544496.1	KEGG: drm:Dred_2682 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase
YP_004544497.1	KEGG: ppp:PHYPADRAFT_190424 hypothetical protein
YP_004544498.1	KEGG: cce:Ccel_2418 hypothetical protein
YP_004544499.1	KEGG: mtb:TBMG_02531 hypothetical protein
YP_004544500.1	manually curated; PFAM: ABC transporter related; KEGG: drm:Dred_0318 ABC transporter related; SMART: AAA ATPase
YP_004544501.1	KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004544502.1	PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein
YP_004544503.1	KEGG: drm:Dred_0321 outer membrane protein-like protein
YP_004544504.1	KEGG: bmq:BMQ_3911 two-component sensor histidine kinase CssS; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein
YP_004544505.1	KEGG: bmd:BMD_3900 two-component response regulator CssR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544506.1	PFAM: Protein of unknown function DUF2089; Intron-encoded nuclease 2; KEGG: bwe:BcerKBAB4_4847 hypothetical protein
YP_004544507.1	KEGG: adg:Adeg_1228 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer
YP_004544508.1	KEGG: dae:Dtox_1727 hypothetical protein
YP_004544509.1	KEGG: drm:Dred_2660 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; PAS fold-4 domain protein
YP_004544510.1	KEGG: drm:Dred_2659 hypothetical protein
YP_004544511.1	PFAM: Like-Sm ribonucleoprotein core; KEGG: pth:PTH_0886 hypothetical protein
YP_004544512.1	PFAM: Radical SAM domain protein; KEGG: pth:PTH_0885 arylsulfatase regulator
YP_004544513.1	PFAM: phosphate transporter; KEGG: drm:Dred_2658 phosphate transporter
YP_004544514.1	PFAM: Putitive phosphate transport regulator; KEGG: drm:Dred_2657 hypothetical protein
YP_004544515.1	KEGG: drm:Dred_2655 sporulation sigma factor SigK; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein
YP_004544516.1	PFAM: protein of unknown function DUF502; KEGG: drm:Dred_2747 hypothetical protein
YP_004544517.1	PFAM: Bile acid:sodium symporter; KEGG: drm:Dred_0457 bile acid:sodium symporter
YP_004544518.1	PFAM: transposase IS4 family protein; KEGG: toc:Toce_1418 transposase IS4 family protein
YP_004544519.1	KEGG: mta:Moth_1229 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein
YP_004544520.1	KEGG: pth:PTH_1497 hypothetical protein
YP_004544521.1	KEGG: ttm:Tthe_2548 hypothetical protein
YP_004544522.1	KEGG: lxx:Lxx12220 integral membrane protein
YP_004544523.1	KEGG: sso:SSO2973 quinol oxidase-2, subunit I/III, cytochrome aa3 (SoxM)
YP_004544524.1	KEGG: eel:EUBELI_00684 hypothetical protein
YP_004544525.1	PFAM: acyltransferase 3; KEGG: npu:Npun_F3800 acyltransferase 3
YP_004544526.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aoe:Clos_0849 short-chain dehydrogenase/reductase SDR
YP_004544527.1	KEGG: drm:Dred_2579 hypothetical protein
YP_004544528.1	KEGG: tet:TTHERM_00332110 hypothetical protein
YP_004544529.1	KEGG: drm:Dred_2578 hypothetical protein
YP_004544530.1	KEGG: drm:Dred_2577 HisJ family histidinol phosphate phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein
YP_004544531.1	KEGG: drm:Dred_1438 membrane protein-like protein
YP_004544532.1	KEGG: drm:Dred_2576 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_004544533.1	KEGG: drm:Dred_2574 beta-lactamase domain-containing protein
YP_004544534.1	KEGG: mta:Moth_1255 hypothetical protein
YP_004544535.1	PFAM: protein of unknown function DUF378; KEGG: drm:Dred_2573 hypothetical protein
YP_004544536.1	KEGG: tjr:TherJR_0419 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor
YP_004544537.1	KEGG: mst:Msp_0959 polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004544538.1	KEGG: tjr:TherJR_0417 ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544539.1	KEGG: pth:PTH_1736 hypothetical protein
YP_004544540.1	PFAM: SirA-like domain-containing protein; KEGG: csc:Csac_2304 SirA family protein
YP_004544541.1	KEGG: pth:PTH_1734 NAD(FAD)-dependent dehydrogenases; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein
YP_004544542.1	KEGG: pth:PTH_1733 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004544543.1	KEGG: drm:Dred_2572 hypothetical protein
YP_004544544.1	PFAM: metallophosphoesterase; KEGG: drm:Dred_2571 metallophosphoesterase
YP_004544545.1	PFAM: SMC domain protein; KEGG: drm:Dred_2570 SMC domain-containing protein
YP_004544546.1	KEGG: cpi:Cpin_4422 signal transduction histidine kinase with CheB and CheR activity
YP_004544547.1	KEGG: dau:Daud_1571 hypothetical protein
YP_004544548.1	PFAM: Na+/solute symporter; KEGG: dau:Daud_1570 Na+/solute symporter
YP_004544549.1	KEGG: dau:Daud_1569 hypothetical protein
YP_004544550.1	SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dau:Daud_1567 DNA-directed DNA polymerase; PFAM: Exonuclease RNase T and DNA polymerase III
YP_004544551.1	KEGG: dau:Daud_2002 cyclic nucleotide-binding protein; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein
YP_004544552.1	PFAM: branched-chain amino acid transport; KEGG: drm:Dred_2569 branched-chain amino acid transport
YP_004544553.1	PFAM: AzlC family protein; KEGG: drm:Dred_2568 AzlC family protein
YP_004544554.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sfu:Sfum_2001 hypothetical protein
YP_004544555.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: drm:Dred_2567 cobalamin (vitamin B12) biosynthesis CbiM protein
YP_004544556.1	KEGG: drm:Dred_2566 hypothetical protein
YP_004544557.1	KEGG: drm:Dred_2565 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein
YP_004544558.1	TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: drm:Dred_2564 cobalt transporter ATP-binding subunit; SMART: AAA ATPase
YP_004544559.1	KEGG: tjr:TherJR_0533 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system
YP_004544560.1	TIGRFAM: prevent-host-death family protein; KEGG: pth:PTH_0540 hypothetical protein
YP_004544561.1	PFAM: UvrD/REP helicase; KEGG: mta:Moth_0254 UvrD/REP helicase
YP_004544562.1	PFAM: protein of unknown function DUF344; KEGG: tai:Taci_0333 protein of unknown function DUF344
YP_004544563.1	KEGG: drm:Dred_2920 hypothetical protein
YP_004544564.1	KEGG: bfo:BRAFLDRAFT_120486 hypothetical protein
YP_004544565.1	KEGG: drm:Dred_2563 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type
YP_004544566.1	TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: drm:Dred_2562 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP
YP_004544567.1	TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: drm:Dred_2561 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase
YP_004544568.1	SMART: AAA ATPase; TIGRFAM: ATP-dependent protease LonB; KEGG: drm:Dred_2560 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein
YP_004544569.1	SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: drm:Dred_2559 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein
YP_004544570.1	KEGG: drm:Dred_2558 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related
YP_004544571.1	PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_2557 dehydrogenase (flavoproteins)
YP_004544572.1	KEGG: drm:Dred_2556 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component
YP_004544573.1	KEGG: drm:Dred_2555 hypothetical protein
YP_004544574.1	KEGG: drm:Dred_2554 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase
YP_004544575.1	PFAM: Uncharacterised protein family UPF0150; KEGG: drm:Dred_2553 hypothetical protein
YP_004544576.1	KEGG: drm:Dred_2552 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein
YP_004544577.1	PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: drm:Dred_2551 redox-sensing transcriptional repressor REX
YP_004544578.1	KEGG: drm:Dred_2550 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein
YP_004544579.1	KEGG: drm:Dred_2549 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC
YP_004544580.1	KEGG: drm:Dred_2548 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl
YP_004544581.1	manually curated; TIGRFAM: rod shape-determining protein MreC; KEGG: drm:Dred_2547 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC
YP_004544582.1	TIGRFAM: rod shape-determining protein MreD; KEGG: drm:Dred_2546 hypothetical protein
YP_004544583.1	TIGRFAM: penicillin-binding protein 2; KEGG: drm:Dred_2545 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_004544584.1	PFAM: Septum formation inhibitor MinC; KEGG: drm:Dred_2544 septum formation inhibitor MinC
YP_004544585.1	TIGRFAM: septum site-determining protein MinD; KEGG: drm:Dred_2543 septum site-determining protein MinD
YP_004544586.1	KEGG: drm:Dred_2542 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE
YP_004544587.1	KEGG: drm:Dred_2541 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein
YP_004544588.1	PFAM: Peptidase M23; KEGG: drm:Dred_2540 peptidase M23B
YP_004544589.1	PFAM: peptidase M50; KEGG: drm:Dred_2539 peptidase M50
YP_004544590.1	KEGG: drm:Dred_2538 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004544591.1	PFAM: Protein of unknown function DUF2344; KEGG: drm:Dred_2537 hypothetical protein
YP_004544592.1	KEGG: drm:Dred_2536 ribonuclease; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; deoxyribonuclease/rho motif-related TRAM
YP_004544593.1	KEGG: drm:Dred_2535 ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21
YP_004544594.1	KEGG: drm:Dred_2534 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27
YP_004544595.1	KEGG: drm:Dred_2533 signal transduction histidine kinase regulating citrate/malate metabolism
YP_004544596.1	KEGG: drm:Dred_2532 GTP1/OBG domain-containing protein; TIGRFAM: GTP-binding protein Obg/CgtA; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein
YP_004544597.1	KEGG: drm:Dred_2531 sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein
YP_004544598.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: drm:Dred_2530 hypothetical protein
YP_004544599.1	PFAM: Sporulation protein YtfJ; KEGG: bts:Btus_2229 sporulation protein YtfJ
YP_004544600.1	KEGG: mcc:702937 apolipoprotein B (including Ag(x) antigen)
YP_004544601.1	KEGG: msm:MSMEG_6058 cadmium transporting P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004544602.1	KEGG: dae:Dtox_1725 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004544603.1	KEGG: dae:Dtox_1726 hypothetical protein
YP_004544604.1	KEGG: dae:Dtox_1727 hypothetical protein
YP_004544605.1	KEGG: dae:Dtox_1728 hypothetical protein
YP_004544606.1	KEGG: drm:Dred_2529 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004544607.1	KEGG: drm:Dred_1859 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; protein of unknown function DUF342; SMART: metal-dependent phosphohydrolase HD region
YP_004544608.1	KEGG: ccb:Clocel_3238 hypothetical protein
YP_004544609.1	KEGG: drm:Dred_1262 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004544610.1	KEGG: drm:Dred_1263 hypothetical protein
YP_004544611.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein
YP_004544612.1	PFAM: protein of unknown function DUF1847; KEGG: dau:Daud_1395 hypothetical protein
YP_004544613.1	PFAM: histidine triad (HIT) protein; KEGG: drm:Dred_2520 histidine triad (HIT) protein
YP_004544614.1	TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: drm:Dred_2519 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_004544615.1	KEGG: drm:Dred_2518 RNP-1-like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein
YP_004544616.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_2517 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_004544617.1	KEGG: drm:Dred_2516 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein
YP_004544618.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pth:PTH_0838 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
YP_004544619.1	KEGG: drm:Dred_2515 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase
YP_004544620.1	PFAM: Protein of unknown function DUF2179; KEGG: drm:Dred_2514 hypothetical protein
YP_004544621.1	PFAM: protein of unknown function DUF421; KEGG: drm:Dred_2513 hypothetical protein
YP_004544622.1	KEGG: drm:Dred_2512 helix-hairpin-helix repeat-containing competence protein ComEA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif
YP_004544623.1	PFAM: Lytic transglycosylase catalytic; KEGG: drm:Dred_2511 lytic transglycosylase, catalytic
YP_004544624.1	KEGG: drm:Dred_2510 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein
YP_004544625.1	KEGG: pjd:Pjdr2_0933 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Methyltransferase type 12; SMART: helix-turn-helix domain protein
YP_004544626.1	PFAM: integrase family protein; KEGG: tit:Thit_1365 integrase family protein
YP_004544627.1	PFAM: protein of unknown function DUF955; KEGG: cbi:CLJ_B1360 phage protein
YP_004544628.1	SMART: helix-turn-helix domain protein; KEGG: bai:BAA_3851 hypothetical protein
YP_004544629.1	SMART: helix-turn-helix domain protein; KEGG: bai:BAA_3850 hypothetical protein
YP_004544630.1	KEGG: hmo:HM1_2938 hypothetical protein; TIGRFAM: phage regulatory protein, Rha family; PFAM: Phage regulatory protein, Rha-like
YP_004544631.1	KEGG: tit:Thit_1409 DNA binding domain protein, excisionase family
YP_004544632.1	KEGG: cju:C8J_0029 hypothetical protein
YP_004544633.1	PFAM: Sporulation initiation factor Spo0A; KEGG: hmo:HM1_0304 stage 0 sporulation protein A
YP_004544634.1	KEGG: apa:APP7_0464 hypothetical protein
YP_004544635.1	KEGG: drm:Dred_1187 hypothetical protein
YP_004544636.1	KEGG: drm:Dred_1188 hypothetical protein
YP_004544637.1	KEGG: drm:Dred_1189 hypothetical protein
YP_004544638.1	KEGG: drm:Dred_1191 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase
YP_004544639.1	KEGG: cbk:CLL_A2772 hypothetical protein
YP_004544640.1	KEGG: bce:BC1875 phage protein
YP_004544641.1	KEGG: pkn:PKH_126950 hypothetical protein
YP_004544642.1	KEGG: drm:Dred_1195 hypothetical protein
YP_004544643.1	PFAM: virulence-associated E family protein; KEGG: drm:Dred_1196 virulence-associated E family protein
YP_004544644.1	PFAM: VRR-NUC domain-containing protein; KEGG: drm:Dred_1197 hypothetical protein
YP_004544645.1	SMART: DEAD-like helicase; KEGG: ccb:Clocel_0764 SNF2-related protein
YP_004544646.1	KEGG: drm:Dred_2611 hypothetical protein
YP_004544647.1	KEGG: pop:POPTR_782800 hypothetical protein
YP_004544648.1	KEGG: enc:ECL_03566 phage terminase small subunit
YP_004544649.1	KEGG: str:Sterm_1259 phage terminase, large subunit, PBSX family; TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit
YP_004544650.1	KEGG: acd:AOLE_10715 putative TonB protein
YP_004544651.1	KEGG: azc:AZC_0840 hypothetical protein
YP_004544652.1	KEGG: pyo:PY04960 hypothetical protein
YP_004544653.1	KEGG: dal:Dalk_3972 hypothetical protein
YP_004544654.1	KEGG: xca:xccb100_0765 pteridine reductase
YP_004544655.1	KEGG: tps:THAPSDRAFT_24562 hypothetical protein
YP_004544656.1	KEGG: der:Dere_GG24267 GG24267 gene product from transcript GG24267-RA
YP_004544657.1	KEGG: cph:Cpha266_1609 hypothetical protein
YP_004544658.1	KEGG: cfl:Cfla_0521 PA14 domain protein
YP_004544659.1	KEGG: ckr:CKR_2872 hypothetical protein
YP_004544660.1	KEGG: amt:Amet_2434 hypothetical protein
YP_004544661.1	KEGG: adg:Adeg_0754 copper amine oxidase domain protein
YP_004544662.1	KEGG: mdo:100015927 similar to NUMA1 variant protein
YP_004544663.1	KEGG: ctp:CTRG_04225 hypothetical protein
YP_004544664.1	KEGG: gca:Galf_2026 hypothetical protein
YP_004544665.1	KEGG: gyc:GYMC61_0644 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis
YP_004544666.1	KEGG: bld:BLi01542 hypothetical protein
YP_004544667.1	PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2806 N-acetylmuramoyl-L-alanine amidase, putative; SMART: cell wall hydrolase/autolysin
YP_004544668.1	KEGG: kpu:KP1_2317 phosphatidylglycerophosphatase B
YP_004544669.1	KEGG: llm:llmg_2265 hypothetical protein
YP_004544670.1	KEGG: hse:Hsero_4503 autotransporter adhesin protein
YP_004544671.1	PFAM: protein of unknown function UPF0060; KEGG: dae:Dtox_3546 protein of unknown function UPF0060
YP_004544672.1	PFAM: protein of unknown function UPF0060; KEGG: dae:Dtox_2546 protein of unknown function UPF0060
YP_004544673.1	KEGG: ccb:Clocel_0464 transcriptional activator ligand binding domain-containing protein; PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR
YP_004544674.1	KEGG: bbe:BBR47_55960 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase
YP_004544675.1	KEGG: drm:Dred_2143 hypothetical protein
YP_004544676.1	PFAM: Methyltransferase type 11; KEGG: mpd:MCP_0237 hypothetical protein
YP_004544677.1	KEGG: reu:Reut_A0738 hypothetical protein
YP_004544678.1	PFAM: glycosyl transferase family 2; Methyltransferase type 11; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein
YP_004544679.1	TIGRFAM: adenylylsulfate kinase; KEGG: sus:Acid_7933 adenylylsulfate kinase / phosphoadenylylsulfate reductase (thioredoxin); PFAM: adenylylsulfate kinase
YP_004544680.1	KEGG: cyp:PCC8801_2037 hypothetical protein
YP_004544681.1	PFAM: Methyltransferase type 12; KEGG: nde:NIDE3427 hypothetical protein
YP_004544682.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dau:Daud_1686 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_004544683.1	KEGG: adg:Adeg_0259 dTDP-4-dehydrorhamnose 3,5-epimerase
YP_004544684.1	KEGG: pth:PTH_1078 dTDP-glucose pyrophosphorylase; TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase
YP_004544685.1	KEGG: pjd:Pjdr2_4988 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004544686.1	KEGG: drm:Dred_2508 hypothetical protein
YP_004544687.1	PFAM: protein of unknown function DUF77; KEGG: drm:Dred_2507 hypothetical protein
YP_004544688.1	KEGG: drm:Dred_2506 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta
YP_004544689.1	KEGG: drm:Dred_2505 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20
YP_004544690.1	PFAM: membrane protein of unknown function; KEGG: drm:Dred_2504 hypothetical protein
YP_004544691.1	KEGG: drm:Dred_2503 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein
YP_004544692.1	KEGG: drm:Dred_2502 hypothetical protein
YP_004544693.1	KEGG: drm:Dred_2501 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein
YP_004544694.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: drm:Dred_2500 putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein
YP_004544695.1	KEGG: drm:Dred_2499 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like
YP_004544696.1	PFAM: chaperonin Cpn60/TCP-1; KEGG: drm:Dred_2498 chaperonin Cpn60/TCP-1
YP_004544697.1	PFAM: GrpE protein; KEGG: drm:Dred_2497 GrpE protein
YP_004544698.1	KEGG: drm:Dred_2496 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70
YP_004544699.1	TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: drm:Dred_2495 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein
YP_004544700.1	KEGG: drm:Dred_2494 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase
YP_004544701.1	PFAM: protein of unknown function DUF558; KEGG: drm:Dred_2493 16S ribosomal RNA methyltransferase RsmE
YP_004544702.1	TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: drm:Dred_2492 RNA modification protein; SMART: Elongator protein 3/MiaB/NifB
YP_004544703.1	PFAM: histidine triad (HIT) protein; KEGG: drm:Dred_2491 histidine triad (HIT) protein
YP_004544704.1	KEGG: drm:Dred_2490 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21
YP_004544705.1	PFAM: protein of unknown function DUF107; KEGG: drm:Dred_2489 hypothetical protein
YP_004544706.1	KEGG: drm:Dred_2488 hypothetical protein
YP_004544707.1	KEGG: drm:Dred_2487 hypothetical protein
YP_004544708.1	KEGG: drm:Dred_2486 hypothetical protein
YP_004544709.1	KEGG: drm:Dred_2485 putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD
YP_004544710.1	PFAM: PhoH family protein; K Homology, type 1, subgroup; KEGG: drm:Dred_2484 PhoH family protein
YP_004544711.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_2483 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_004544712.1	PFAM: protein of unknown function UPF0054; KEGG: drm:Dred_2482 putative metalloprotease
YP_004544713.1	PFAM: diacylglycerol kinase; KEGG: drm:Dred_2481 diacylglycerol kinase
YP_004544714.1	KEGG: drm:Dred_2480 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding
YP_004544715.1	KEGG: drm:Dred_2479 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein
YP_004544716.1	KEGG: dau:Daud_0481 magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region
YP_004544717.1	manually curated; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: drm:Dred_2477 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein
YP_004544718.1	KEGG: drm:Dred_2475 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO
YP_004544719.1	KEGG: drm:Dred_2474 hypothetical protein
YP_004544720.1	TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: drm:Dred_2473 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit
YP_004544721.1	TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: drm:Dred_2472 glycine--tRNA ligase
YP_004544722.1	PFAM: CBS domain containing protein; KEGG: drm:Dred_2471 signal-transduction protein
YP_004544723.1	PFAM: protein of unknown function DUF299; KEGG: drm:Dred_2470 hypothetical protein
YP_004544724.1	TIGRFAM: pyruvate, phosphate dikinase; KEGG: drm:Dred_2469 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein
YP_004544725.1	TIGRFAM: prevent-host-death family protein; KEGG: drm:Dred_2468 prevent-host-death family protein
YP_004544726.1	PFAM: plasmid stabilization system; KEGG: drm:Dred_2467 plasmid stabilization system protein
YP_004544727.1	KEGG: spo:SPAC869.02c nitric oxide dioxygenase (predicted)
YP_004544728.1	KEGG: det:DET1456 2'-5' RNA ligase family protein; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX
YP_004544729.1	PFAM: NADPH-dependent FMN reductase; KEGG: drm:Dred_2465 NADPH-dependent FMN reductase
YP_004544730.1	TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_2464 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region
YP_004544731.1	TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; KEGG: drm:Dred_2463 Fis family transcriptional regulator; SMART: Toprim sub domain-containing protein
YP_004544732.1	KEGG: drm:Dred_2462 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein
YP_004544733.1	KEGG: pth:PTH_0707 hypothetical protein; manually curated; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family
YP_004544734.1	PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_4242 hypothetical protein
YP_004544735.1	TIGRFAM: CRISPR-associated protein, Csx11 family; KEGG: cag:Cagg_3827 CRISPR-associated protein, Csx11 family
YP_004544736.1	KEGG: rca:Rcas_4240 CRISPR-associated RAMP Cmr4 family protein family protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324
YP_004544737.1	KEGG: rca:Rcas_4239 hypothetical protein
YP_004544738.1	PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_4238 hypothetical protein
YP_004544739.1	KEGG: pth:PTH_0396 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein
YP_004544740.1	KEGG: pth:PTH_0397 cytotoxic translational repressor
YP_004544741.1	KEGG: drm:Dred_2461 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004544742.1	PFAM: protein of unknown function DUF633; KEGG: drm:Dred_2460 hypothetical protein
YP_004544743.1	PFAM: protein of unknown function DUF34; KEGG: drm:Dred_2459 hypothetical protein
YP_004544744.1	PFAM: protein of unknown function DUF164; KEGG: drm:Dred_2458 hypothetical protein
YP_004544745.1	KEGG: drm:Dred_2457 oligoendopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F
YP_004544746.1	KEGG: tro:trd_1612 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004544747.1	KEGG: drm:Dred_2456 ribonuclease H; PFAM: ribonuclease H
YP_004544748.1	KEGG: bte:BTH_I0976 cell division protein FtsK
YP_004544749.1	PFAM: flavodoxin/nitric oxide synthase; KEGG: mta:Moth_1287 beta-lactamase-like
YP_004544750.1	PFAM: flavin reductase domain protein FMN-binding; Rubredoxin-type Fe(Cys)4 protein; KEGG: dhd:Dhaf_2394 flavin reductase domain protein FMN-binding
YP_004544751.1	KEGG: drm:Dred_1431 hypothetical protein
YP_004544752.1	KEGG: drm:Dred_2455 hypothetical protein
YP_004544753.1	PFAM: extracellular solute-binding protein family 5; KEGG: drm:Dred_2454 extracellular solute-binding protein
YP_004544754.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2453 binding-protein-dependent transport systems inner membrane component
YP_004544755.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2452 binding-protein-dependent transport systems inner membrane component
YP_004544756.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_2451 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004544757.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_2450 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004544758.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gbm:Gbem_1202 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein
YP_004544759.1	KEGG: drm:Dred_2449 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004544760.1	KEGG: drm:Dred_2448 hypothetical protein
YP_004544761.1	PFAM: NUDIX hydrolase; KEGG: drm:Dred_2447 NUDIX hydrolase
YP_004544762.1	KEGG: drm:Dred_2446 hypothetical protein
YP_004544763.1	KEGG: drm:Dred_2445 hypothetical protein
YP_004544764.1	PFAM: 2-phosphosulfolactate phosphatase; KEGG: drm:Dred_2444 2-phosphosulfolactate phosphatase
YP_004544765.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: drm:Dred_2443 MotA/TolQ/ExbB proton channel
YP_004544766.1	PFAM: OmpA/MotB domain protein; KEGG: drm:Dred_2442 OmpA/MotB domain-containing protein
YP_004544767.1	KEGG: drm:Dred_2441 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein
YP_004544768.1	KEGG: drm:Dred_2440 CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; P2 response regulator binding domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein
YP_004544769.1	KEGG: drm:Dred_2439 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver
YP_004544770.1	KEGG: drm:Dred_2438 putative anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein
YP_004544771.1	PFAM: FlgN family protein; KEGG: drm:Dred_2437 hypothetical protein
YP_004544772.1	KEGG: mta:Moth_0746 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004544773.1	KEGG: mta:Moth_0747 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein
YP_004544774.1	KEGG: drm:Dred_2434 hypothetical protein
YP_004544775.1	PFAM: flagellin domain protein; KEGG: cbf:CLI_2781 flagellin
YP_004544776.1	PFAM: protein of unknown function DUF115; KEGG: tit:Thit_0477 protein of unknown function DUF115
YP_004544777.1	KEGG: cth:Cthe_2234 hypothetical protein
YP_004544778.1	KEGG: rpf:Rpic12D_0580 polysaccharide biosynthesis protein CapD; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: polysaccharide biosynthesis protein CapD
YP_004544779.1	KEGG: npu:Npun_R0689 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_004544780.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: npu:Npun_R0688 acylneuraminate cytidylyltransferase
YP_004544781.1	KEGG: bcg:BCG9842_B1722 pseudaminic acid biosynthesis-associated protein PseG; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; PFAM: Glycosyltransferase 28 domain
YP_004544782.1	TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; KEGG: rpf:Rpic12D_0586 GCN5-related N-acetyltransferase
YP_004544783.1	PFAM: LmbE family protein; KEGG: swo:Swol_0211 putative LmbE-like protein
YP_004544784.1	TIGRFAM: pseudaminic acid synthase; KEGG: npu:Npun_R0684 N-acetylneuraminic acid synthase domain-containing protein; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein
YP_004544785.1	KEGG: dae:Dtox_0663 hypothetical protein
YP_004544786.1	PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: cth:Cthe_2218 flagellar hook-associated 2-like protein
YP_004544787.1	KEGG: drm:Dred_2417 carbon storage regulator, CsrA; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator
YP_004544788.1	PFAM: protein of unknown function DUF180; KEGG: drm:Dred_2416 hypothetical protein
YP_004544789.1	KEGG: drm:Dred_2415 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS
YP_004544790.1	KEGG: drm:Dred_2414 hypothetical protein
YP_004544791.1	PFAM: flagellar protein FlaG protein; KEGG: drm:Dred_2413 flagellar protein FlaG protein
YP_004544792.1	PFAM: protein of unknown function DUF86; KEGG: drm:Dred_2423 hypothetical protein
YP_004544793.1	PFAM: DNA polymerase beta domain protein region; KEGG: drm:Dred_2422 DNA polymerase beta subunit
YP_004544794.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: drm:Dred_2412 DegT/DnrJ/EryC1/StrS aminotransferase
YP_004544795.1	KEGG: drm:Dred_2411 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein
YP_004544796.1	KEGG: drm:Dred_2410 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004544797.1	KEGG: drm:Dred_2409 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE
YP_004544798.1	KEGG: drm:Dred_2408 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein
YP_004544799.1	KEGG: drm:Dred_2407 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG
YP_004544800.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: drm:Dred_2406 flagellar biosynthesis/type III secretory pathway protein-like protein
YP_004544801.1	TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: drm:Dred_2405 flagellar protein export ATPase FliI; SMART: AAA ATPase
YP_004544802.1	TIGRFAM: flagellar export protein FliJ; KEGG: drm:Dred_2404 flagellar export protein FliJ
YP_004544803.1	PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: drm:Dred_2403 flagellar hook-length control protein
YP_004544804.1	PFAM: flagellar hook capping protein; KEGG: drm:Dred_2402 flagellar hook capping protein
YP_004544805.1	KEGG: dae:Dtox_0695 flagellar operon protein; manually curated; TIGRFAM: flagellar operon protein
YP_004544806.1	KEGG: bha:BH2449 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004544807.1	PFAM: flagellar basal body-associated protein FliL; KEGG: drm:Dred_2399 flagellar basal body-associated protein FliL
YP_004544808.1	PFAM: surface presentation of antigens (SPOA) protein; KEGG: drm:Dred_2398 surface presentation of antigens (SpoA) protein
YP_004544809.1	KEGG: drm:Dred_2397 hypothetical protein
YP_004544810.1	KEGG: drm:Dred_2396 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein
YP_004544811.1	KEGG: drm:Dred_2395 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; type III secretion protein, HrpO family; PFAM: export protein FliQ family 3
YP_004544812.1	KEGG: drm:Dred_2394 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein
YP_004544813.1	KEGG: drm:Dred_2393 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter
YP_004544814.1	KEGG: drm:Dred_2392 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein
YP_004544815.1	TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: drm:Dred_2391 flagellar biosynthesis regulator FlhF; SMART: AAA ATPase
YP_004544816.1	KEGG: drm:Dred_2390 cobyrinic acid a,c-diamide synthase
YP_004544817.1	PFAM: type IV pilus assembly PilZ; KEGG: drm:Dred_2389 type IV pilus assembly PilZ
YP_004544818.1	KEGG: drm:Dred_2388 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein
YP_004544819.1	KEGG: drm:Dred_2387 hypothetical protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein
YP_004544820.1	KEGG: drm:Dred_2386 hypothetical protein; TIGRFAM: fagellar hook-basal body protein; flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004544821.1	PFAM: CheD family protein; KEGG: drm:Dred_2385 CheD, stimulates methylation of MCP proteins
YP_004544822.1	PFAM: MCP methyltransferase CheR-type; KEGG: drm:Dred_2384 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type
YP_004544823.1	PFAM: CheC domain protein; KEGG: drm:Dred_2383 CheC, inhibitor of MCP methylation
YP_004544824.1	KEGG: drm:Dred_2382 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004544825.1	KEGG: drm:Dred_2381 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein
YP_004544826.1	KEGG: drm:Dred_2380 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein
YP_004544827.1	KEGG: drm:Dred_2379 hypothetical protein
YP_004544828.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: drm:Dred_2378 MazG nucleotide pyrophosphohydrolase
YP_004544829.1	KEGG: drm:Dred_2377 hypothetical protein
YP_004544830.1	TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: drm:Dred_2376 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004544831.1	KEGG: drm:Dred_2375 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I
YP_004544833.1	KEGG: drm:Dred_0460 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004544834.1	KEGG: nca:Noca_4014 hypothetical protein
YP_004544835.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: drm:Dred_2372 xanthine/uracil/vitamin C permease
YP_004544836.1	TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: drm:Dred_2371 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_004544837.1	KEGG: drm:Dred_2370 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like
YP_004544838.1	TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: drm:Dred_2369 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_004544839.1	KEGG: drm:Dred_2368 phosphoribosylformylglycinamidine synthase, PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS
YP_004544840.1	KEGG: drm:Dred_2367 phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I
YP_004544841.1	TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: drm:Dred_2366 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_004544842.1	KEGG: drm:Dred_2365 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase
YP_004544843.1	TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: drm:Dred_2364 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_004544844.1	KEGG: drm:Dred_2363 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein
YP_004544845.1	SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: drm:Dred_2362 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein
YP_004544846.1	TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: drm:Dred_2361 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain
YP_004544847.1	KEGG: drm:Dred_2360 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor
YP_004544848.1	TIGRFAM: histidyl-tRNA synthetase 2; KEGG: drm:Dred_2359 histidine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S)
YP_004544849.1	TIGRFAM: ATP phosphoribosyltransferase; KEGG: drm:Dred_2356 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region
YP_004544850.1	TIGRFAM: histidinol dehydrogenase; KEGG: drm:Dred_2355 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase
YP_004544851.1	KEGG: drm:Dred_2354 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II
YP_004544852.1	KEGG: drm:Dred_2353 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase
YP_004544853.1	KEGG: drm:Dred_2352 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I
YP_004544854.1	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: drm:Dred_2351 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein
YP_004544855.1	KEGG: drm:Dred_2350 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein
YP_004544856.1	KEGG: drm:Dred_2349 phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like
YP_004544857.1	KEGG: ttm:Tthe_0277 hypothetical protein
YP_004544858.1	KEGG: drm:Dred_2348 ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase
YP_004544859.1	KEGG: drm:Dred_2347 hypothetical protein
YP_004544860.1	TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein; KEGG: drm:Dred_2346 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein
YP_004544861.1	KEGG: drm:Dred_2345 pyrrolo-quinoline quinone
YP_004544862.1	PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2344 S-layer domain-containing protein
YP_004544863.1	KEGG: drm:Dred_2343 putative endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP
YP_004544864.1	KEGG: drm:Dred_2342 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit
YP_004544865.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: drm:Dred_2341 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase
YP_004544866.1	KEGG: drm:Dred_2340 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase
YP_004544867.1	KEGG: drm:Dred_2339 trans-homoaconitate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase
YP_004544868.1	manually curated; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; KEGG: drm:Dred_2338 homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein
YP_004544869.1	KEGG: drm:Dred_2337 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein
YP_004544870.1	TIGRFAM: isocitrate dehydrogenase, NAD-dependent; KEGG: pth:PTH_2517 isocitrate/isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_004544871.1	PFAM: Methyltransferase type 11; KEGG: mbu:Mbur_2332 UbiE/COQ5 methyltransferase
YP_004544872.1	KEGG: dau:Daud_0574 hypothetical protein
YP_004544873.1	KEGG: cdf:CD2911 phage protein
YP_004544874.1	KEGG: cpy:Cphy_2959 hypothetical protein
YP_004544875.1	KEGG: cdl:CDR20291_1441 phage protein
YP_004544876.1	PFAM: XkdM protein, phage-like element PBSX; KEGG: cdf:CD2909 phage protein
YP_004544877.1	PFAM: XkdN-like protein; KEGG: cdl:CDR20291_1444 phage protein
YP_004544878.1	KEGG: lsp:Bsph_1782 putative phage tail tape measure protein
YP_004544879.1	KEGG: cpy:Cphy_2954 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004544880.1	KEGG: cdl:CDR20291_1451 putative phage cell wall hydrolase
YP_004544881.1	KEGG: str:Sterm_1444 hypothetical protein
YP_004544882.1	KEGG: cpy:Cphy_2951 phage protein
YP_004544883.1	PFAM: Baseplate J family protein; KEGG: cdf:CD2900 putative phage tail protein
YP_004544884.1	KEGG: cpy:Cphy_2949 hypothetical protein
YP_004544885.1	KEGG: cbe:Cbei_0926 hypothetical protein
YP_004544887.1	KEGG: act:ACLA_030660 translation regulator (Cya5), putative
YP_004544888.1	KEGG: pjd:Pjdr2_1561 phage uncharacterized protein, XkdX family; TIGRFAM: phage uncharacterized protein, XkdX family; PFAM: uncharacterised protein XkdX
YP_004544889.1	KEGG: drm:Dred_2336 carbohydrate-binding family 25 protein
YP_004544891.1	PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2335 glycosyl transferase, group 1
YP_004544892.1	PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: drm:Dred_2334 nucleotidyl transferase
YP_004544893.1	PFAM: Threonyl/alanyl tRNA synthetase SAD; Alanyl-tRNA synthetase, class IIc-like; KEGG: drm:Dred_2333 phage tail protein I
YP_004544894.1	KEGG: drm:Dred_2332 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU)
YP_004544895.1	SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: drm:Dred_2331 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop
YP_004544896.1	PFAM: CoA-binding domain protein; KEGG: drm:Dred_2330 CoA-binding domain-containing protein
YP_004544897.1	PFAM: protein of unknown function DUF340 membrane; KEGG: drm:Dred_2329 hypothetical protein
YP_004544898.1	PFAM: protein of unknown function DUF340 membrane; KEGG: drm:Dred_2328 protein of unknown function DUF340, membrane
YP_004544899.1	PFAM: Abortive infection protein; KEGG: drm:Dred_2327 abortive infection protein
YP_004544900.1	KEGG: drm:Dred_2326 hypothetical protein
YP_004544901.1	KEGG: drm:Dred_2325 glycoside hydrolase family protein; manually curated; PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57
YP_004544902.1	PFAM: LmbE family protein; KEGG: drm:Dred_2324 LmbE family protein
YP_004544903.1	PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2323 glycosyl transferase, group 1
YP_004544904.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: drm:Dred_2322 antibiotic biosynthesis monooxygenase
YP_004544905.1	PFAM: NLP/P60 protein; KEGG: drm:Dred_2321 NLP/P60 protein
YP_004544906.1	PFAM: Protein of unknown function DUF2225; KEGG: drm:Dred_2320 tetratricopeptide domain-containing protein
YP_004544907.1	SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: drm:Dred_2319 DNA polymerase III DnaE; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type
YP_004544908.1	PFAM: TrkA-C domain protein; KEGG: drm:Dred_2318 TrkA domain-containing protein
YP_004544909.1	PFAM: tryptophan RNA-binding attenuator protein; KEGG: pth:PTH_2219 transcription attenuation protein MtrB
YP_004544910.1	KEGG: drm:Dred_2316 hypothetical protein
YP_004544911.1	KEGG: drm:Dred_2315 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase
YP_004544912.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: drm:Dred_2314 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region
YP_004544913.1	KEGG: drm:Dred_2313 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase
YP_004544914.1	KEGG: drm:Dred_2312 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region
YP_004544915.1	PFAM: SNARE associated Golgi protein; KEGG: drm:Dred_2311 hypothetical protein
YP_004544916.1	PFAM: lipolytic protein G-D-S-L family; KEGG: drm:Dred_2310 GDSL family lipase
YP_004544917.1	KEGG: dae:Dtox_3323 hypothetical protein
YP_004544918.1	TIGRFAM: anthranilate synthase component I; KEGG: drm:Dred_0248 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein
YP_004544919.1	KEGG: drm:Dred_0249 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I
YP_004544920.1	KEGG: drm:Dred_0250 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like
YP_004544921.1	KEGG: drm:Dred_0251 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_004544922.1	KEGG: drm:Dred_0252 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_004544923.1	KEGG: drm:Dred_0253 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004544924.1	TIGRFAM: tryptophan synthase, alpha subunit; KEGG: drm:Dred_0254 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain
YP_004544925.1	KEGG: drm:Dred_2309 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; PFAM: sigma-70 region 2 domain protein
YP_004544926.1	KEGG: drm:Dred_2308 hypothetical protein
YP_004544927.1	KEGG: drm:Dred_2307 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein
YP_004544928.1	KEGG: drm:Dred_2306 hypothetical protein
YP_004544929.1	PFAM: Fe-S cluster domain protein; KEGG: drm:Dred_2305 ferredoxin 2
YP_004544930.1	manually curated; PFAM: regulatory protein ArsR; KEGG: gwc:GWCH70_3194 transcriptional regulator, ArsR family; SMART: regulatory protein ArsR
YP_004544931.1	KEGG: sti:Sthe_2171 hypothetical protein
YP_004544932.1	KEGG: cyc:PCC7424_1483 hypothetical protein
YP_004544933.1	manually curated; KEGG: dae:Dtox_2782 plasmid stabilization system
YP_004544934.1	KEGG: drm:Dred_2286 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004544935.1	PFAM: Protein of unknown function DUF2275, transmembrane; KEGG: drm:Dred_0040 putative transmembrane anti-sigma factor
YP_004544936.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: drm:Dred_2284 NifU domain-containing protein
YP_004544937.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: pth:PTH_2132 hypothetical protein
YP_004544938.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: drm:Dred_2282 LysR family transcriptional regulator
YP_004544939.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: drm:Dred_2280 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004544940.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2277 iron-containing alcohol dehydrogenase
YP_004544941.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2276 iron-containing alcohol dehydrogenase
YP_004544942.1	KEGG: drm:Dred_2275 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein
YP_004544943.1	KEGG: drm:Dred_2274 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004544944.1	PFAM: thiamineS protein; KEGG: drm:Dred_2272 hypothetical protein
YP_004544945.1	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: adg:Adeg_1006 aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase
YP_004544946.1	PFAM: thiamineS protein; KEGG: drm:Dred_2271 thiamineS protein
YP_004544947.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2270 binding-protein-dependent transport systems inner membrane component
YP_004544948.1	KEGG: drm:Dred_2269 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004544949.1	TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: drm:Dred_2268 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_004544950.1	KEGG: drm:Dred_2267 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC
YP_004544951.1	PFAM: MOSC domain containing protein; KEGG: drm:Dred_2266 MOSC domain-containing protein
YP_004544952.1	KEGG: drm:Dred_2264 UBA/ThiF-type NAD/FAD binding protein; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein
YP_004544953.1	PFAM: major facilitator superfamily MFS_1; KEGG: mpd:MCP_2343 MFS transporter
YP_004544954.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mta:Moth_1107 hypothetical protein
YP_004544955.1	KEGG: drm:Dred_2262 hypothetical protein
YP_004544956.1	KEGG: mbu:Mbur_0523 catalase; PFAM: Catalase related subgroup; Catalase domain protein
YP_004544957.1	KEGG: drm:Dred_2261 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase
YP_004544958.1	PFAM: alpha/beta hydrolase fold; KEGG: sat:SYN_02434 hydrolase or acyltransferase
YP_004544959.1	KEGG: dhd:Dhaf_2182 hypothetical protein
YP_004544960.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004544961.1	TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; PFAM: helicase domain protein; KEGG: amt:Amet_1662 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase
YP_004544962.1	KEGG: mla:Mlab_0849 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5
YP_004544963.1	KEGG: dae:Dtox_3649 CRISPR-associated protein, Csd1 family; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133
YP_004544964.1	KEGG: bha:BH0339 hypothetical protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801
YP_004544965.1	TIGRFAM: CRISPR-associated protein Cas4; KEGG: dhd:Dhaf_2187 CRISPR-associated protein Cas4
YP_004544966.1	KEGG: dhd:Dhaf_2188 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48
YP_004544967.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: dhd:Dhaf_2189 CRISPR-associated protein Cas2
YP_004544968.1	KEGG: ure:UREG_04343 similar to acyl-CoA dehydrogenase
YP_004544969.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004544970.1	KEGG: dsy:DSY3700 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein
YP_004544971.1	KEGG: dhd:Dhaf_1656 hypothetical protein
YP_004544972.1	PFAM: UspA domain-containing protein; KEGG: dsy:DSY4453 hypothetical protein
YP_004544973.1	KEGG: pth:PTH_0284 transposase and inactivated derivatives
YP_004544974.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lbf:LBF_0126 short chain dehydrogenase
YP_004544975.1	KEGG: lbf:LBF_0127 transcription regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004544976.1	KEGG: pth:PTH_0284 transposase and inactivated derivatives
YP_004544977.1	TIGRFAM: tyrosyl-tRNA synthetase; KEGG: ere:EUBREC_0190 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein
YP_004544978.1	KEGG: pak:HMPREF0675_4878 hypothetical protein
YP_004544979.1	PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: cbl:CLK_1713 choloylglycine hydrolase family protein
YP_004544980.1	PFAM: Methyltransferase type 12; KEGG: dae:Dtox_1469 methyltransferase type 12
YP_004544981.1	PFAM: Methyltransferase type 11; KEGG: syp:SYNPCC7002_A0523 SAM-dependent methyltransferase
YP_004544982.1	KEGG: amt:Amet_1915 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544983.1	KEGG: amt:Amet_1916 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004544984.1	PFAM: lipolytic protein G-D-S-L family; KEGG: amt:Amet_1979 GDSL family lipase
YP_004544985.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: amt:Amet_1980 membrane bound O-acyl transferase, MBOAT family protein
YP_004544986.1	KEGG: cbe:Cbei_2782 hypothetical protein
YP_004544987.1	KEGG: cpy:Cphy_1008 MerR family transcriptional regulator; PFAM: TipAS antibiotic-recognition domain-containing protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR
YP_004544988.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004544989.1	PFAM: protein of unknown function UPF0157; KEGG: gtn:GTNG_0311 hypothetical protein
YP_004544990.1	KEGG: lpc:LPC_2744 hypothetical protein
YP_004544991.1	PFAM: protein of unknown function UPF0047; KEGG: dae:Dtox_0608 polynucleotide adenylyltransferase/metal dependent phosphohydrolase
YP_004544992.1	manually curated; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; KEGG: tjr:TherJR_1682 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein
YP_004544993.1	PFAM: AMP-dependent synthetase and ligase; KEGG: tjr:TherJR_1681 AMP-dependent synthetase and ligase
YP_004544994.1	PFAM: acyltransferase 3; KEGG: dhd:Dhaf_2192 acyltransferase 3
YP_004544995.1	KEGG: dhd:Dhaf_2193 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004544996.1	KEGG: dhd:Dhaf_2194 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004544997.1	KEGG: dhd:Dhaf_2195 hypothetical protein
YP_004544998.1	PFAM: transcriptional regulator PadR family protein; KEGG: afl:Aflv_0293 predicted transcriptional regulator, PadR family
YP_004544999.1	KEGG: dhd:Dhaf_2173 hypothetical protein
YP_004545000.1	KEGG: cpy:Cphy_1796 beta-lactamase domain-containing protein
YP_004545001.1	KEGG: amt:Amet_1438 hypothetical protein
YP_004545002.1	PFAM: Methyltransferase type 11; KEGG: hau:Haur_0170 methyltransferase type 11
YP_004545003.1	KEGG: ana:alr3490 hypothetical protein
YP_004545004.1	PFAM: regulatory protein TetR; KEGG: slp:Slip_2342 transcriptional regulator, TetR family
YP_004545005.1	PFAM: secretion protein HlyD family protein; KEGG: slp:Slip_2341 secretion protein HlyD family protein
YP_004545006.1	KEGG: slp:Slip_2340 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1
YP_004545007.1	PFAM: UspA domain-containing protein; KEGG: bay:RBAM_036340 YxiE
YP_004545008.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein
YP_004545009.1	KEGG: aoe:Clos_2735 hypothetical protein
YP_004545010.1	KEGG: bja:bll5958 hypothetical protein
YP_004545011.1	KEGG: gym:GYMC10_2680 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase
YP_004545012.1	KEGG: dtu:Dtur_1708 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI
YP_004545013.1	PFAM: RbsD or FucU transport; KEGG: gka:GK3229 D-ribose pyranase
YP_004545014.1	KEGG: dtu:Dtur_1644 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545015.1	PFAM: inner-membrane translocator; KEGG: pin:Ping_0342 ribose ABC transporter permease protein
YP_004545016.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tpd:Teth39_2038 monosaccharide-transporting ATPase
YP_004545017.1	KEGG: pdi:BDI_1657 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein
YP_004545018.1	TIGRFAM: deoxyribose-phosphate aldolase; KEGG: tjr:TherJR_2670 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
YP_004545019.1	KEGG: hmo:HM1_1647 hypothetical protein
YP_004545020.1	KEGG: hmo:HM1_1646 bacitracin abc transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545021.1	KEGG: cbt:CLH_2461 regulatory protein VanR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004545022.1	KEGG: bwe:BcerKBAB4_2314 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004545023.1	KEGG: mpi:Mpet_1171 hypothetical protein
YP_004545024.1	PFAM: Spore coat protein CotH; KEGG: cce:Ccel_0251 spore coat protein CotH
YP_004545025.1	KEGG: dhd:Dhaf_2306 hypothetical protein
YP_004545026.1	PFAM: VTC domain; KEGG: dhd:Dhaf_2305 hypothetical protein
YP_004545027.1	KEGG: shi:Shel_13160 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004545028.1	KEGG: ele:Elen_0372 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004545029.1	PFAM: integrase family protein; KEGG: dhd:Dhaf_0174 integrase family protein
YP_004545030.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dhd:Dhaf_0175 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_004545031.1	KEGG: esi:Exig_2989 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004545032.1	KEGG: esi:Exig_2988 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004545033.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_6008 major facilitator superfamily MFS_1
YP_004545034.1	PFAM: aldo/keto reductase; KEGG: cbe:Cbei_0558 aldo/keto reductase
YP_004545035.1	PFAM: protein of unknown function DUF111; KEGG: ccb:Clocel_4273 hypothetical protein
YP_004545036.1	KEGG: amt:Amet_4636 glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2
YP_004545037.1	KEGG: amt:Amet_4635 hypothetical protein
YP_004545038.1	PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cbe:Cbei_0561 NCAIR mutase (PurE)-related protein
YP_004545039.1	KEGG: cno:NT01CX_1623 hypothetical protein
YP_004545040.1	KEGG: fjo:Fjoh_2015 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR
YP_004545041.1	TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: cpy:Cphy_3480 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_004545042.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: aco:Amico_0912 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
YP_004545043.1	TIGRFAM: small, acid-soluble spore protein tlp; KEGG: cbi:CLJ_B1081 small acid-soluble spore protein Tlp
YP_004545044.1	KEGG: bbe:BBR47_15170 hypothetical protein
YP_004545045.1	PFAM: Pirin domain protein; KEGG: emi:Emin_0339 pirin domain-containing protein
YP_004545046.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nth:Nther_0968 NADH:flavin oxidoreductase/NADH oxidase
YP_004545047.1	PFAM: NADPH-dependent FMN reductase; KEGG: mta:Moth_1770 NADPH-dependent FMN reductase
YP_004545048.1	PFAM: helix-turn-helix HxlR type; KEGG: cbe:Cbei_0347 HxlR family transcriptional regulator
YP_004545049.1	PFAM: peptidase M24; creatinase; KEGG: drm:Dred_2216 peptidase M24
YP_004545050.1	PFAM: regulatory protein MerR; KEGG: afl:Aflv_0173 transcriptional regulator (MerR family)
YP_004545051.1	KEGG: cbf:CLI_0804 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004545052.1	KEGG: drm:Dred_0747 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004545053.1	SMART: TRASH domain-containing protein; KEGG: drm:Dred_0746 hypothetical protein
YP_004545054.1	PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: drm:Dred_1508 sec-independent translocation protein MttA/Hcf106
YP_004545055.1	KEGG: dae:Dtox_0955 hypothetical protein
YP_004545056.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004545057.1	KEGG: cth:Cthe_1408 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004545058.1	KEGG: cth:Cthe_1409 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004545059.1	KEGG: drm:Dred_0322 Fis family transcriptional regulator
YP_004545060.1	KEGG: drm:Dred_0323 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004545061.1	KEGG: drm:Dred_0324 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004545062.1	KEGG: cpy:Cphy_3870 hypothetical protein
YP_004545063.1	KEGG: drm:Dred_0318 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545064.1	KEGG: drm:Dred_0319 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004545065.1	PFAM: protein of unknown function DUF214; KEGG: drm:Dred_0320 hypothetical protein
YP_004545066.1	PFAM: ferredoxin; KEGG: mta:Moth_2112 ferredoxin
YP_004545067.1	KEGG: mta:Moth_2111 uroporphyrinogen-III decarboxylase-like
YP_004545068.1	PFAM: cobalamin B12-binding domain protein; KEGG: dhd:Dhaf_0195 cobalamin B12-binding domain protein
YP_004545069.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: dhd:Dhaf_0196 uroporphyrinogen decarboxylase (URO-D)
YP_004545070.1	KEGG: dhd:Dhaf_0197 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein
YP_004545071.1	KEGG: dhd:Dhaf_0198 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004545072.1	manually curated; KEGG: dhd:Dhaf_0199 hypothetical protein
YP_004545073.1	KEGG: dhd:Dhaf_0203 hypothetical protein
YP_004545074.1	KEGG: dhd:Dhaf_0204 hypothetical protein
YP_004545075.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dhd:Dhaf_0205 Rieske (2Fe-2S) domain protein
YP_004545076.1	PFAM: Cytochrome b/b6 domain; KEGG: dhd:Dhaf_0206 cytochrome b/b6 domain protein
YP_004545077.1	PFAM: Cytochrome b/b6 domain; KEGG: dhd:Dhaf_0207 subunit IV of cytochrome bc complex petd
YP_004545078.1	KEGG: dhd:Dhaf_0208 hypothetical protein
YP_004545079.1	KEGG: dhd:Dhaf_0209 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II
YP_004545080.1	KEGG: dhd:Dhaf_0210 hypothetical protein
YP_004545081.1	KEGG: dhd:Dhaf_0211 periplasmic copper-binding; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat
YP_004545082.1	KEGG: dhd:Dhaf_0212 hypothetical protein
YP_004545083.1	KEGG: dhd:Dhaf_0213 membrane protein NosY
YP_004545084.1	KEGG: dhd:Dhaf_0214 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545085.1	KEGG: swo:Swol_1520 ResB protein required for cytochrome c biosynthesis-like protein
YP_004545086.1	KEGG: mta:Moth_2200 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein
YP_004545087.1	KEGG: adg:Adeg_1254 putative transcriptional regulator, AsnC family
YP_004545088.1	KEGG: dae:Dtox_2732 hypothetical protein
YP_004545089.1	KEGG: dae:Dtox_2731 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004545090.1	PFAM: ferric-uptake regulator; KEGG: dae:Dtox_1006 ferric uptake regulator, Fur family
YP_004545091.1	KEGG: cbh:CLC_1080 hypothetical protein
YP_004545092.1	KEGG: gtn:GTNG_2957 arsenate reductase-like protein; manually curated; PFAM: arsenate reductase and related
YP_004545093.1	KEGG: dae:Dtox_3521 hypothetical protein
YP_004545094.1	PFAM: Rubrerythrin; KEGG: drm:Dred_2212 rubrerythrin
YP_004545095.1	KEGG: drm:Dred_2210 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related
YP_004545096.1	PFAM: HI0933 family protein; KEGG: drm:Dred_2209 hypothetical protein
YP_004545097.1	PFAM: Vitamin B12 dependent methionine synthase activation region; KEGG: drm:Dred_2208 vitamin B12 dependent methionine synthase, activation region
YP_004545098.1	PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: drm:Dred_2207 homocysteine S-methyltransferase
YP_004545099.1	PFAM: ferredoxin; KEGG: drm:Dred_2206 ferredoxin
YP_004545100.1	KEGG: ehi:EHI_077750 hypothetical protein
YP_004545101.1	KEGG: tbr:Tb927.5.2110 hypothetical protein
YP_004545103.1	KEGG: drm:Dred_2204 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004545104.1	KEGG: drm:Dred_2203 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004545105.1	PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2202 glycosyl transferase, group 1
YP_004545106.1	KEGG: drm:Dred_2201 hypothetical protein
YP_004545107.1	KEGG: drm:Dred_2200 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related
YP_004545108.1	KEGG: drm:Dred_2199 hypothetical protein
YP_004545109.1	KEGG: drm:Dred_2198 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_004545110.1	KEGG: drm:Dred_2197 UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein
YP_004545111.1	KEGG: drm:Dred_2196 4-hydroxybenzoate polyprenyltransferase, putative; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase
YP_004545112.1	KEGG: drm:Dred_2195 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004545113.1	PFAM: protein of unknown function DUF178; KEGG: drm:Dred_2194 hypothetical protein
YP_004545114.1	manually curated; PFAM: Radical SAM domain protein; KEGG: drm:Dred_2193 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB
YP_004545115.1	PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: tjr:TherJR_1577 rubrerythrin
YP_004545116.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: drm:Dred_2192 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_004545117.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: drm:Dred_2191 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004545118.1	KEGG: drm:Dred_2190 L-lactate transport; TIGRFAM: L-lactate transport; PFAM: L-lactate permease
YP_004545119.1	KEGG: hmo:HM1_0368 glycolate permease glca; TIGRFAM: L-lactate transport; PFAM: L-lactate permease
YP_004545120.1	KEGG: drm:Dred_2188 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004545121.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004545122.1	KEGG: drm:Dred_2188 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004545123.1	TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: drm:Dred_2186 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase
YP_004545124.1	KEGG: drm:Dred_2185 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3
YP_004545125.1	KEGG: drm:Dred_2181 hypothetical protein
YP_004545126.1	KEGG: drm:Dred_2180 hypothetical protein
YP_004545127.1	KEGG: gvi:gll0736 hypothetical protein
YP_004545128.1	KEGG: drm:Dred_2179 metallophosphoesterase; PFAM: metallophosphoesterase
YP_004545129.1	KEGG: dba:Dbac_0645 hypothetical protein
YP_004545130.1	KEGG: drm:Dred_2178 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004545131.1	PFAM: basic membrane lipoprotein; KEGG: drm:Dred_2177 basic membrane lipoprotein
YP_004545132.1	KEGG: drm:Dred_2176 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545133.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2175 inner-membrane translocator
YP_004545134.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2174 inner-membrane translocator
YP_004545135.1	KEGG: drm:Dred_2173 xanthine phosphoribosyltransferase; TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004545136.1	PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2172 hypothetical protein
YP_004545137.1	TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: dhd:Dhaf_2104 PTS system, lactose/cellobiose family IIC subunit; SMART: EAL domain protein
YP_004545138.1	PFAM: Late competence development protein ComFB; KEGG: toc:Toce_1330 late competence development protein ComFB
YP_004545139.1	KEGG: tde:TDE0553 hypothetical protein
YP_004545140.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cpy:Cphy_1602 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein
YP_004545141.1	PFAM: 4-vinyl reductase 4VR; KEGG: cpy:Cphy_1603 4-vinyl reductase 4VR
YP_004545142.1	KEGG: dae:Dtox_0613 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer
YP_004545143.1	KEGG: aoe:Clos_1960 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver
YP_004545144.1	KEGG: ppd:Ppro_0042 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer
YP_004545145.1	PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_2190 glycosyl transferase family 2
YP_004545146.1	PFAM: GCN5-related N-acetyltransferase; KEGG: clj:CLJU_c30550 putative acetyltransferase
YP_004545147.1	PFAM: ATP-binding region ATPase domain protein; KEGG: cpy:Cphy_1601 signal transduction histidine kinase regulating citrate/malate metabolism
YP_004545148.1	KEGG: cpy:Cphy_1600 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver
YP_004545149.1	PFAM: UspA domain-containing protein; KEGG: drm:Dred_2171 UspA domain-containing protein
YP_004545150.1	PFAM: nitroreductase; KEGG: clj:CLJU_c35240 putative nitroreductase
YP_004545151.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: cby:CLM_1318 UAA transporter family
YP_004545152.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_0517 LysR family transcriptional regulator
YP_004545153.1	KEGG: drm:Dred_2170 hypothetical protein
YP_004545154.1	KEGG: cel:T09A5.10 abnormal cell LINeage family member (lin-5)
YP_004545155.1	KEGG: tva:TVAG_120770 hypothetical protein
YP_004545156.1	KEGG: adg:Adeg_1516 ribosomal protein L29
YP_004545157.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dal:Dalk_4393 GCN5-related N-acetyltransferase
YP_004545158.1	PFAM: Uncharacterised protein family UPF0126; KEGG: drm:Dred_0622 hypothetical protein
YP_004545159.1	KEGG: spl:Spea_2481 hypothetical protein
YP_004545160.1	KEGG: rle:pRL80010 hypothetical protein
YP_004545161.1	PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2806 N-acetylmuramoyl-L-alanine amidase, putative; SMART: cell wall hydrolase/autolysin
YP_004545162.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein
YP_004545163.1	KEGG: gym:GYMC10_5374 hypothetical protein
YP_004545164.1	KEGG: ckr:CKR_2681 hypothetical protein
YP_004545165.1	KEGG: dae:Dtox_1892 hypothetical protein
YP_004545166.1	KEGG: drm:Dred_0422 hemolysin III family channel protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein
YP_004545167.1	KEGG: bpu:BPUM_1297 hypothetical protein
YP_004545168.1	KEGG: drm:Dred_2167 hypothetical protein
YP_004545169.1	PFAM: Polyprenyl synthetase; KEGG: drm:Dred_2166 trans-hexaprenyltranstransferase
YP_004545170.1	TIGRFAM: siroheme synthase; KEGG: drm:Dred_2165 siroheme synthase
YP_004545171.1	KEGG: drm:Dred_2164 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase
YP_004545172.1	TIGRFAM: porphobilinogen deaminase; KEGG: drm:Dred_2163 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_004545173.1	KEGG: drm:Dred_2162 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4
YP_004545174.1	KEGG: drm:Dred_2161 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004545175.1	KEGG: drm:Dred_2160 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase
YP_004545176.1	KEGG: drm:Dred_2159 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004545177.1	SMART: Transcription regulator AsnC-type; KEGG: drm:Dred_2158 AsnC family transcriptional regulator
YP_004545178.1	KEGG: drm:Dred_2157 AsnC family transcriptional regulator
YP_004545179.1	KEGG: drm:Dred_2156 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III
YP_004545180.1	PFAM: protein of unknown function DUF74; KEGG: drm:Dred_2155 hypothetical protein
YP_004545181.1	KEGG: drm:Dred_2154 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein
YP_004545182.1	KEGG: drm:Dred_2153 hypothetical protein
YP_004545183.1	PFAM: fumarate lyase; Fumarase C-like; KEGG: pth:PTH_0981 aspartate ammonia-lyase
YP_004545184.1	KEGG: drm:Dred_2152 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related
YP_004545185.1	KEGG: drm:Dred_2151 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004545186.1	PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: drm:Dred_2150 thiamine biosynthesis protein ThiH
YP_004545187.1	KEGG: drm:Dred_2149 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; TrkA-C domain protein; SMART: regulatory protein GntR HTH
YP_004545188.1	TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: drm:Dred_2148 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein
YP_004545189.1	KEGG: dae:Dtox_4312 hypothetical protein
YP_004545190.1	KEGG: drm:Dred_2147 hypothetical protein
YP_004545191.1	KEGG: ddi:DDB_G0288695 hypothetical protein
YP_004545192.1	KEGG: drm:Dred_2146 hypothetical protein
YP_004545193.1	KEGG: cbe:Cbei_3346 putative DNA alkylation repair enzyme
YP_004545194.1	PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: cbe:Cbei_3528 stress responsive alpha-beta barrel domain-containing protein
YP_004545195.1	PFAM: regulatory protein TetR; KEGG: ele:Elen_2311 transcriptional regulator, TetR family
YP_004545196.1	KEGG: cby:CLM_0802 transcriptional regulator, AraC family
YP_004545197.1	PFAM: oxidoreductase/nitrogenase component 1; KEGG: cbl:CLK_0093 hypothetical protein
YP_004545198.1	KEGG: bmq:BMQ_1300 hypothetical protein
YP_004545199.1	PFAM: GCN5-related N-acetyltransferase; KEGG: msm:MSMEG_0187 acetyltransferase
YP_004545200.1	KEGG: cdl:CDR20291_3183 hypothetical protein
YP_004545201.1	KEGG: cfl:Cfla_0433 aminoglycoside-2''-adenylyltransferase
YP_004545202.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver
YP_004545203.1	TIGRFAM: branched-chain amino acid aminotransferase; KEGG: drm:Dred_2144 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV
YP_004545205.1	KEGG: ptm:GSPATT00012299001 hypothetical protein
YP_004545206.1	KEGG: slp:Slip_1454 hypothetical protein
YP_004545207.1	KEGG: ckr:CKR_2728 hypothetical protein
YP_004545208.1	manually curated; KEGG: pjd:Pjdr2_2955 dienelactone hydrolase
YP_004545209.1	PFAM: major facilitator superfamily MFS_1; KEGG: dds:Ddes_1414 major facilitator superfamily MFS_1
YP_004545210.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dhd:Dhaf_0858 transcriptional regulator, LysR family
YP_004545211.1	KEGG: drm:Dred_0605 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein
YP_004545212.1	KEGG: drm:Dred_0606 hypothetical protein
YP_004545213.1	KEGG: drm:Dred_0607 hypothetical protein
YP_004545214.1	KEGG: drm:Dred_0608 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_004545215.1	KEGG: drm:Dred_3227 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp
YP_004545216.1	KEGG: drm:Dred_1481 camphor resistance CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein
YP_004545217.1	KEGG: drm:Dred_1480 CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein
YP_004545218.1	KEGG: drm:Dred_2123 type I phosphodiesterase/nucleotide pyrophosphatase
YP_004545219.1	KEGG: drm:Dred_2122 hypothetical protein
YP_004545220.1	PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: drm:Dred_2121 nitrite and sulphite reductase 4Fe-4S region
YP_004545221.1	KEGG: drm:Dred_2108 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_004545222.1	KEGG: drm:Dred_2107 histidine kinase; PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004545223.1	KEGG: dae:Dtox_1954 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004545224.1	TIGRFAM: phosphate binding protein; KEGG: drm:Dred_2106 phosphate binding protein
YP_004545225.1	KEGG: drm:Dred_2105 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004545226.1	KEGG: drm:Dred_2104 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004545227.1	TIGRFAM: primosome, DnaD subunit; KEGG: drm:Dred_2103 primosome, DnaD subunit
YP_004545228.1	KEGG: drm:Dred_2102 cell wall hydrolase, SleB; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004545229.1	KEGG: drm:Dred_2101 manganese and iron superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004545230.1	KEGG: drm:Dred_2100 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_004545231.1	KEGG: vvi:100244483 hypothetical protein LOC100244483
YP_004545232.1	KEGG: fjo:Fjoh_1001 methyltransferase type 11
YP_004545233.1	KEGG: drm:Dred_2099 hypothetical protein
YP_004545234.1	KEGG: ftw:FTW_0360 hypothetical protein
YP_004545236.1	PFAM: major facilitator superfamily MFS_1; KEGG: btb:BMB171_C4685 macrolide-efflux protein
YP_004545237.1	PFAM: NUDIX hydrolase; KEGG: cbh:CLC_2706 MutT/NUDIX family protein
YP_004545238.1	KEGG: etr:ETAE_2867 amino acid transporter
YP_004545239.1	PFAM: regulatory protein TetR; KEGG: bcl:ABC3460 TetR/AcrR family transcriptional regulator
YP_004545240.1	KEGG: pth:PTH_1937 hypothetical protein
YP_004545241.1	KEGG: rxy:Rxyl_2589 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004545242.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: chy:CHY_2698 D-3-phosphoglycerate dehydrogenase
YP_004545243.1	KEGG: dhd:Dhaf_4412 malate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase
YP_004545244.1	PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein
YP_004545245.1	KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein
YP_004545246.1	KEGG: met:M446_4285 hypothetical protein
YP_004545247.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: dsy:DSY0654 hypothetical protein
YP_004545248.1	KEGG: dhd:Dhaf_4416 hypothetical protein
YP_004545249.1	PFAM: Integral membrane protein TerC; KEGG: bbe:BBR47_11800 hypothetical protein
YP_004545250.1	PFAM: SAF domain protein; KEGG: dba:Dbac_2155 SAF domain protein
YP_004545251.1	KEGG: dvm:DvMF_2005 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein
YP_004545252.1	KEGG: dhd:Dhaf_4416 hypothetical protein
YP_004545254.1	PFAM: Propanediol utilization protein; KEGG: drm:Dred_2095 propanediol utilization protein
YP_004545255.1	KEGG: drm:Dred_2094 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase
YP_004545256.1	TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: drm:Dred_2093 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding
YP_004545257.1	TIGRFAM: riboflavin synthase, alpha subunit; KEGG: drm:Dred_2092 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_004545258.1	KEGG: drm:Dred_2091 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_004545259.1	KEGG: drm:Dred_2090 riboflavin synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase
YP_004545260.1	KEGG: drm:Dred_2089 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28
YP_004545261.1	TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: drm:Dred_2088 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein
YP_004545262.1	PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: det:DET1173 FwdE family protein
YP_004545263.1	PFAM: periplasmic binding protein; KEGG: dsy:DSY0390 hypothetical protein
YP_004545264.1	PFAM: transport system permease protein; KEGG: dae:Dtox_0485 transport system permease protein
YP_004545265.1	KEGG: dae:Dtox_0486 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545266.1	KEGG: dhd:Dhaf_0589 hypothetical protein
YP_004545267.1	KEGG: drm:Dred_2087 hypothetical protein
YP_004545268.1	TIGRFAM: spore protease; KEGG: drm:Dred_2086 germination protease; PFAM: peptidase M63 germination protease
YP_004545269.1	KEGG: drm:Dred_2085 putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein CHP00095
YP_004545270.1	TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: drm:Dred_2084 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase
YP_004545271.1	KEGG: drm:Dred_2083 vacuolar-type H+-ATPase subunit H
YP_004545272.1	KEGG: mth:MTH483 hypothetical protein
YP_004545273.1	PFAM: DRTGG domain protein; KEGG: drm:Dred_2082 DRTGG domain-containing protein
YP_004545274.1	KEGG: drm:Dred_2081 CoA-binding domain-containing protein; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain protein; PFAM: CoA-binding domain protein
YP_004545275.1	KEGG: drm:Dred_2080 nucleoside recognition domain-containing protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein
YP_004545276.1	KEGG: drm:Dred_2079 hypothetical protein; manually curated; PFAM: protein of unknown function DUF177
YP_004545277.1	KEGG: drm:Dred_2078 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein
YP_004545278.1	PFAM: regulatory protein DeoR; KEGG: drm:Dred_2077 fatty acid biosynthesis transcriptional regulator
YP_004545279.1	KEGG: drm:Dred_2076 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein
YP_004545280.1	KEGG: drm:Dred_2075 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_004545281.1	KEGG: drm:Dred_2074 2-nitropropane dioxygenase, NPD; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase NPD
YP_004545282.1	KEGG: drm:Dred_2073 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase
YP_004545283.1	KEGG: drm:Dred_2072 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR
YP_004545284.1	KEGG: drm:Dred_2071 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding
YP_004545285.1	KEGG: drm:Dred_2070 beta-ketoacyl synthase; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase
YP_004545286.1	SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: drm:Dred_2069 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein
YP_004545287.1	KEGG: drm:Dred_2068 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein
YP_004545288.1	TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: drm:Dred_2067 signal recognition particle-docking protein FtsY; SMART: AAA ATPase
YP_004545289.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: dae:Dtox_3544 protein of unknown function DUF21
YP_004545290.1	KEGG: taf:THA_837 transcriptional regulator, TetR family, putative
YP_004545291.1	PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2806 N-acetylmuramoyl-L-alanine amidase, putative; SMART: cell wall hydrolase/autolysin
YP_004545293.1	KEGG: ckr:CKR_2872 hypothetical protein
YP_004545294.1	KEGG: gym:GYMC10_5391 hypothetical protein
YP_004545295.1	PFAM: Baseplate J family protein; KEGG: ckr:CKR_2875 hypothetical protein
YP_004545296.1	PFAM: GPW/gp25 family protein; KEGG: gvi:gll1413 hypothetical protein
YP_004545297.1	KEGG: swi:Swit_2568 ribokinase-like domain-containing protein
YP_004545298.1	KEGG: bgl:bglu_1g20340 hypothetical protein
YP_004545299.1	KEGG: dhd:Dhaf_1417 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004545300.1	KEGG: afl:Aflv_0673 phage-related tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region
YP_004545301.1	KEGG: vha:VIBHAR_05109 hypothetical protein
YP_004545302.1	KEGG: lga:LGAS_1829 ABC-type multidrug transport system, ATPase and permease component
YP_004545303.1	KEGG: hau:Haur_1774 hypothetical protein
YP_004545304.1	KEGG: dae:Dtox_0532 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004545305.1	KEGG: cfl:Cfla_2260 tail sheath protein
YP_004545306.1	KEGG: fpl:Ferp_1025 hypothetical protein
YP_004545307.1	KEGG: btr:Btr_2621 hypothetical protein
YP_004545308.1	KEGG: ppp:PHYPADRAFT_166969 hypothetical protein
YP_004545309.1	KEGG: clj:CLJU_c31310 phage-like protein
YP_004545310.1	KEGG: abu:Abu_1669 Mu-like prophage I protein, putative
YP_004545311.1	KEGG: npu:Npun_R2610 SPP1 family phage head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7
YP_004545312.1	KEGG: dap:Dacet_2219 hypothetical protein
YP_004545313.1	KEGG: dal:Dalk_4561 bacteriophage tail assembly protein-like protein
YP_004545314.1	KEGG: amt:Amet_1950 hypothetical protein
YP_004545315.1	KEGG: hth:HTH_0884 hypothetical protein
YP_004545316.1	KEGG: amt:Amet_4371 hypothetical protein
YP_004545317.1	KEGG: dae:Dtox_4222 hypothetical protein
YP_004545318.1	PFAM: Mor transcription activator domain protein; KEGG: dae:Dtox_4221 Mor transcription activator domain protein
YP_004545319.1	KEGG: amt:Amet_4387 hypothetical protein
YP_004545320.1	KEGG: mca:MCA2948 prophage MuMc02, host-nuclease inhibitor protein
YP_004545321.1	KEGG: dae:Dtox_4218 hypothetical protein
YP_004545322.1	KEGG: dsy:DSY2192 hypothetical protein
YP_004545323.1	KEGG: cpi:Cpin_0093 group II decarboxylase family protein
YP_004545324.1	manually curated; PFAM: IstB domain protein ATP-binding protein; KEGG: dae:Dtox_4220 IstB domain protein ATP-binding protein; SMART: AAA ATPase
YP_004545325.1	KEGG: nhl:Nhal_3406 Appr-1-p processing domain protein
YP_004545326.1	KEGG: dvi:Dvir_GJ10692 GJ10692 gene product from transcript GJ10692-RA
YP_004545327.1	KEGG: tva:TVAG_174520 SNF7 family protein
YP_004545328.1	KEGG: amt:Amet_4393 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: AAA ATPase
YP_004545329.1	PFAM: Transposase-like Mu ; Integrase catalytic region; KEGG: amt:Amet_0388 transposase
YP_004545330.1	KEGG: dhd:Dhaf_4545 putative phage regulatory protein
YP_004545331.1	TIGRFAM: LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; KEGG: drm:Dred_1183 putative prophage repressor; SMART: helix-turn-helix domain protein
YP_004545332.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: drm:Dred_1580 hypothetical protein
YP_004545333.1	KEGG: drm:Dred_0419 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR
YP_004545334.1	PFAM: SpoOM family protein; KEGG: drm:Dred_0420 SpoOM family protein
YP_004545335.1	PFAM: peptidase M48 Ste24p; KEGG: drm:Dred_0421 peptidase M48, Ste24p
YP_004545336.1	KEGG: drm:Dred_2065 5'-methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1
YP_004545337.1	TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: drm:Dred_2064 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related
YP_004545338.1	TIGRFAM: adenosylhomocysteinase; KEGG: drm:Dred_2063 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding
YP_004545339.1	PFAM: class II aldolase/adducin family protein; KEGG: drm:Dred_2062 class II aldolase/adducin family protein
YP_004545340.1	PFAM: amidohydrolase; KEGG: drm:Dred_2061 amidohydrolase
YP_004545341.1	KEGG: drm:Dred_2060 PUA domain-containing protein; PFAM: ribosomal L11 methyltransferase; SMART: PUA domain containing protein
YP_004545342.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_1655 hypothetical protein
YP_004545343.1	KEGG: amt:Amet_0496 S-layer domain-containing protein
YP_004545344.1	PFAM: AAA-4 family protein; KEGG: drm:Dred_2059 putative transcriptional regulator
YP_004545345.1	KEGG: drm:Dred_2058 aminotransferase class-III; PFAM: aminotransferase class-III
YP_004545346.1	KEGG: drm:Dred_2057 putative DNA-binding protein; manually curated; PFAM: helix-turn-helix protein YlxM/p13 family protein
YP_004545347.1	TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: drm:Dred_2056 signal recognition particle protein; SMART: AAA ATPase
YP_004545348.1	KEGG: drm:Dred_2055 ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16
YP_004545349.1	KEGG: drm:Dred_2054 hypothetical protein
YP_004545350.1	KEGG: drm:Dred_2053 hypothetical protein
YP_004545351.1	KEGG: drm:Dred_2052 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein
YP_004545352.1	TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: drm:Dred_2051 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_004545353.1	KEGG: drm:Dred_2050 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19
YP_004545354.1	TIGRFAM: signal peptidase I; KEGG: drm:Dred_2049 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_004545355.1	KEGG: drm:Dred_2048 GTP-binding protein, HSR1-related; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related
YP_004545356.1	KEGG: amt:Amet_2740 ribonuclease H; PFAM: ribonuclease HII/HIII
YP_004545357.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: drm:Dred_2046 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004545358.1	TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: drm:Dred_2045 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_004545359.1	KEGG: drm:Dred_2044 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_004545360.1	TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: drm:Dred_2043 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa
YP_004545361.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: drm:Dred_2042 respiratory-chain NADH dehydrogenase, subunit 1
YP_004545362.1	KEGG: drm:Dred_2041 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004545363.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: drm:Dred_2040 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_004545364.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: drm:Dred_2039 NADH-ubiquinone oxidoreductase, chain 4L
YP_004545365.1	KEGG: drm:Dred_2038 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein
YP_004545366.1	KEGG: drm:Dred_2037 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_004545367.1	KEGG: drm:Dred_2036 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_004545368.1	PFAM: Uncharacterised protein family UPF0102; KEGG: drm:Dred_2035 hypothetical protein
YP_004545369.1	KEGG: drm:Dred_2034 hypothetical protein
YP_004545371.1	KEGG: tna:CTN_0053 beta-lactamase domain protein
YP_004545372.1	KEGG: drm:Dred_2286 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004545373.1	KEGG: drm:Dred_2263 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004545374.1	KEGG: mta:Moth_1001 hypothetical protein
YP_004545375.1	PFAM: aminotransferase class I and II; KEGG: drt:Dret_1447 aminotransferase class I and II
YP_004545376.1	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: drm:Dred_2023 Mg chelatase, subunit ChlI; SMART: AAA ATPase
YP_004545378.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: hmo:HM1_0096 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_004545379.1	TIGRFAM: homoserine O-succinyltransferase; KEGG: cce:Ccel_3331 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase
YP_004545380.1	KEGG: dsy:DSY4291 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004545381.1	KEGG: dpe:Dper_GL24408 GL24408 gene product from transcript GL24408-RA
YP_004545382.1	KEGG: tde:TDE2409 hypothetical protein
YP_004545383.1	PFAM: protein of unknown function DUF89; KEGG: pth:PTH_0661 hypothetical protein
YP_004545385.1	PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: pth:PTH_1685 hypothetical protein
YP_004545386.1	PFAM: Citrate transporter; KEGG: drm:Dred_1990 citrate transporter
YP_004545387.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: hmo:HM1_2720 N-acetylmuramoyl-L-alanine amidase, putative
YP_004545388.1	KEGG: pti:PHATRDRAFT_54326 suppressor of stem-loop protein 1
YP_004545389.1	KEGG: ath:AT3G02050 KUP3 (K+ UPTAKE TRANSPORTER 3); potassium ion transmembrane transporter
YP_004545390.1	SMART: AAA ATPase; KEGG: drm:Dred_2013 AAA ATPase
YP_004545391.1	PFAM: protein of unknown function DUF456; KEGG: drm:Dred_2010 hypothetical protein
YP_004545392.1	PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: drm:Dred_2009 hypothetical protein
YP_004545393.1	PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: drm:Dred_2008 glutamine amidotransferase
YP_004545394.1	KEGG: pth:PTH_1647 hypothetical protein
YP_004545395.1	KEGG: drm:Dred_2006 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein
YP_004545396.1	KEGG: drm:Dred_2005 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444
YP_004545397.1	PFAM: SpoVR family protein; KEGG: drm:Dred_2004 SpoVR family protein
YP_004545398.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: drm:Dred_2003 Ku domain-containing protein; SMART: Ku domain protein
YP_004545399.1	KEGG: drm:Dred_2002 ATP dependent DNA ligase; TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein
YP_004545400.1	KEGG: drm:Dred_2001 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004545401.1	KEGG: drm:Dred_2000 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004545402.1	PFAM: CBS domain containing protein; KEGG: drm:Dred_1999 CBS domain-containing protein
YP_004545403.1	KEGG: drm:Dred_1998 hypothetical protein
YP_004545404.1	KEGG: drm:Dred_1997 helix-turn-helix, type 11 domain-containing protein
YP_004545405.1	PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: drm:Dred_1995 sulphate transporter
YP_004545406.1	KEGG: drm:Dred_1993 hypothetical protein
YP_004545407.1	PFAM: Protein of unknown function DUF2294; KEGG: drm:Dred_1992 hypothetical protein
YP_004545408.1	KEGG: drm:Dred_1986 DNA primase, small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit
YP_004545409.1	KEGG: drm:Dred_1985 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein
YP_004545410.1	SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: drm:Dred_1984 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein
YP_004545411.1	TIGRFAM: gid protein; KEGG: drm:Dred_1983 gid protein; PFAM: glucose-inhibited division protein A
YP_004545412.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_1982 tyrosine recombinase XerC
YP_004545413.1	PFAM: 20S proteasome A and B subunits; KEGG: drm:Dred_1981 ATP-dependent protease peptidase subunit
YP_004545414.1	TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: drm:Dred_1980 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase
YP_004545415.1	KEGG: drm:Dred_1979 transcriptional repressor CodY; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein
YP_004545416.1	KEGG: drm:Dred_1978 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2
YP_004545417.1	KEGG: drm:Dred_1977 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein
YP_004545418.1	KEGG: drm:Dred_1976 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_004545419.1	KEGG: drm:Dred_1975 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor
YP_004545420.1	KEGG: nda:Ndas_5307 glycosyl transferase family 51
YP_004545421.1	KEGG: drm:Dred_1974 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004545422.1	TIGRFAM: undecaprenyl diphosphate synthase; KEGG: drm:Dred_1973 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_004545423.1	PFAM: phosphatidate cytidylyltransferase; KEGG: drm:Dred_1972 phosphatidate cytidylyltransferase
YP_004545424.1	KEGG: drm:Dred_1971 hypothetical protein; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118
YP_004545425.1	TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: drm:Dred_1970 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein
YP_004545426.1	TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_1969 putative membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein
YP_004545427.1	KEGG: drm:Dred_1968 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein
YP_004545428.1	KEGG: drm:Dred_1967 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein
YP_004545429.1	PFAM: Monogalactosyldiacylglycerol synthase; glycosyl transferase group 1; KEGG: drm:Dred_1966 monogalactosyldiacylglycerol synthase
YP_004545430.1	TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: drm:Dred_1965 DNA polymerase III, alpha subunit; SMART: Exonuclease; phosphoesterase PHP domain protein
YP_004545431.1	KEGG: drm:Dred_1964 hypothetical protein
YP_004545432.1	PFAM: polysaccharide deacetylase; KEGG: drm:Dred_1963 polysaccharide deacetylase
YP_004545433.1	KEGG: dae:Dtox_0377 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004545434.1	KEGG: dae:Dtox_0378 hypothetical protein
YP_004545435.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004545436.1	KEGG: cce:Ccel_1489 hypothetical protein
YP_004545437.1	KEGG: ere:EUBREC_1946 transcription elongation factor NusA
YP_004545438.1	KEGG: drm:Dred_1962 hypothetical protein
YP_004545439.1	KEGG: adg:Adeg_1917 hypothetical protein
YP_004545440.1	PFAM: protein of unknown function DUF150; KEGG: drm:Dred_1961 hypothetical protein
YP_004545441.1	KEGG: drm:Dred_1960 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein
YP_004545442.1	PFAM: protein of unknown function DUF448; KEGG: drm:Dred_1959 hypothetical protein
YP_004545443.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: drm:Dred_1958 ribosomal protein L7Ae/L30e/S12e/Gadd45
YP_004545444.1	KEGG: drm:Dred_1957 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein
YP_004545445.1	KEGG: drm:Dred_1956 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A
YP_004545446.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: drm:Dred_1955 phosphoesterase domain-containing protein
YP_004545447.1	KEGG: drm:Dred_1954 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; PUA domain containing protein
YP_004545448.1	KEGG: drm:Dred_1953 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase
YP_004545449.1	KEGG: dae:Dtox_3183 hypothetical protein
YP_004545450.1	manually curated; KEGG: tjr:TherJR_1383 hypothetical protein
YP_004545451.1	KEGG: drm:Dred_1951 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15
YP_004545452.1	SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: drm:Dred_1950 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein
YP_004545453.1	KEGG: drm:Dred_1949 cell wall hydrolase, SleB; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein
YP_004545454.1	KEGG: ckr:CKR_1271 hypothetical protein; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein
YP_004545455.1	PFAM: polysaccharide deacetylase; KEGG: drm:Dred_1948 polysaccharide deacetylase
YP_004545456.1	PFAM: peptidase M16 domain protein; KEGG: drm:Dred_1947 peptidase M16 domain-containing protein
YP_004545457.1	KEGG: drm:Dred_1946 hypothetical protein
YP_004545458.1	KEGG: drm:Dred_1945 hypothetical protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein
YP_004545459.1	PFAM: dihydrodipicolinate reductase; manually curated; KEGG: drm:Dred_1944 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase
YP_004545460.1	KEGG: drm:Dred_1943 dipicolinate synthase subunit A; TIGRFAM: dipicolinic acid synthetase, A subunit; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
YP_004545461.1	KEGG: drm:Dred_1942 dipicolinate synthase subunit B; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: flavoprotein
YP_004545462.1	TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: drm:Dred_1941 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding
YP_004545463.1	KEGG: drm:Dred_1940 aspartate kinase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_004545464.1	KEGG: drm:Dred_1939 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase
YP_004545465.1	PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: drm:Dred_1938 beta-lactamase domain-containing protein
YP_004545466.1	manually curated; KEGG: amt:Amet_2249 hypothetical protein
YP_004545467.1	PFAM: peptidase S14 ClpP; KEGG: drm:Dred_1937 peptidase S14, ClpP
YP_004545468.1	KEGG: pth:PTH_1291 hypothetical protein
YP_004545469.1	PFAM: Coat F domain protein; KEGG: drm:Dred_1935 coat F domain-containing protein
YP_004545470.1	KEGG: tpd:Teth39_0443 hypothetical protein
YP_004545471.1	PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: drm:Dred_1934 cell divisionFtsK/SpoIIIE
YP_004545472.1	TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese domain protein; KEGG: drm:Dred_1933 tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein
YP_004545473.1	KEGG: drm:Dred_1932 hypothetical protein
YP_004545474.1	PFAM: General secretory system II protein E domain protein; KEGG: ele:Elen_1600 bacteriophage N4 adsorption protein B
YP_004545475.1	KEGG: aca:ACP_2165 hypothetical protein
YP_004545476.1	KEGG: dba:Dbac_0853 hydrogenase, putative
YP_004545477.1	manually curated; KEGG: drm:Dred_1929 hypothetical protein
YP_004545478.1	PFAM: SMF family protein; KEGG: drm:Dred_1928 DNA uptake Rossmann fold nucleotide-binding protein
YP_004545479.1	PFAM: protein of unknown function DUF520; KEGG: drm:Dred_1927 putative nucleotide-binding protein
YP_004545480.1	TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: drm:Dred_1926 MiaB-like tRNA modifying enzyme YliG; SMART: Elongator protein 3/MiaB/NifB
YP_004545481.1	TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: drm:Dred_1925 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004545482.1	KEGG: drm:Dred_1924 hypothetical protein
YP_004545483.1	PFAM: AAA ATPase central domain protein; peptidase M41; KEGG: drm:Dred_1923 vesicle-fusing ATPase; SMART: AAA ATPase
YP_004545484.1	KEGG: drm:Dred_1922 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain
YP_004545485.1	KEGG: drm:Dred_1921 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004545486.1	TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: drm:Dred_1920 RecA protein; SMART: AAA ATPase
YP_004545487.1	TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: drm:Dred_1919 phosphodiesterase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein
YP_004545488.1	KEGG: drm:Dred_1918 hypothetical protein
YP_004545489.1	PFAM: metallophosphoesterase; KEGG: drm:Dred_1917 metallophosphoesterase
YP_004545490.1	PFAM: Stage V sporulation protein S; KEGG: drm:Dred_1916 stage V sporulation protein S
YP_004545491.1	KEGG: drm:Dred_1915 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase
YP_004545492.1	KEGG: drm:Dred_1914 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein
YP_004545493.1	PFAM: aminotransferase class I and II; KEGG: drm:Dred_1913 aminotransferase, class I and II
YP_004545494.1	KEGG: drm:Dred_1912 hypothetical protein
YP_004545495.1	KEGG: pth:PTH_1310 hypothetical protein
YP_004545496.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_1911 metal dependent phosphohydrolase
YP_004545497.1	PFAM: cobalbumin biosynthesis protein; KEGG: dae:Dtox_3094 adenosylcobinamide-phosphateguanylyltransferase; SMART: AAA ATPase
YP_004545498.1	KEGG: drm:Dred_1908 phosphoglycerate mutase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase
YP_004545499.1	KEGG: drm:Dred_1907 hypothetical protein
YP_004545500.1	PFAM: transcriptional regulator PadR family protein; KEGG: clj:CLJU_c22780 putative transcriptional regulator
YP_004545501.1	SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: drm:Dred_1906 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein
YP_004545502.1	KEGG: pth:PTH_1319 hypothetical protein
YP_004545503.1	KEGG: drm:Dred_1905 hypothetical protein
YP_004545504.1	KEGG: drm:Dred_1904 hypothetical protein
YP_004545505.1	PFAM: NUDIX hydrolase; KEGG: drm:Dred_1901 NUDIX hydrolase
YP_004545506.1	KEGG: drm:Dred_1900 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC
YP_004545507.1	KEGG: drm:Dred_1899 hypothetical protein
YP_004545508.1	PFAM: glycosyl transferase family 2; KEGG: drm:Dred_1898 glycosyl transferase family protein
YP_004545509.1	KEGG: drm:Dred_1897 glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase
YP_004545510.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: drm:Dred_1896 NAD-dependent epimerase/dehydratase
YP_004545511.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: drm:Dred_1895 NAD-dependent epimerase/dehydratase
YP_004545512.1	PFAM: AMP-dependent synthetase and ligase; KEGG: chy:CHY_0572 acetyl-coenzyme A synthetase family protein
YP_004545513.1	KEGG: ang:An03g00230 hypothetical protein
YP_004545514.1	PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bbe:BBR47_22570 putative pyruvate dehydrogenase
YP_004545516.1	PFAM: glutaredoxin; KEGG: fpl:Ferp_1272 glutaredoxin
YP_004545517.1	KEGG: fpl:Ferp_1273 ferredoxin thioredoxin reductase beta chain
YP_004545519.1	TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: drm:Dred_1889 (dimethylallyl)adenosine tRNA methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB
YP_004545520.1	KEGG: drm:Dred_1888 hypothetical protein
YP_004545521.1	TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: drm:Dred_1887 DNA mismatch repair protein MutS; SMART: MutS III domain protein; DNA mismatch repair protein MutS domain protein
YP_004545522.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: drm:Dred_1886 hydantoinase/oxoprolinase
YP_004545523.1	PFAM: histone deacetylase superfamily; KEGG: drm:Dred_1885 histone deacetylase superfamily protein
YP_004545524.1	KEGG: drm:Dred_1884 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein
YP_004545525.1	PFAM: protein of unknown function DUF548; KEGG: drm:Dred_1883 hypothetical protein
YP_004545526.1	TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: drm:Dred_1882 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_004545527.1	KEGG: drm:Dred_1881 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core
YP_004545528.1	KEGG: drm:Dred_1880 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_004545529.1	PFAM: Aluminium resistance family protein; KEGG: drm:Dred_1879 aluminium resistance family protein
YP_004545530.1	KEGG: dae:Dtox_2410 sporulation lipoprotein, YhcN/YlaJ family; TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: Sporulation lipoprotein YhcN/YlaJ-like
YP_004545531.1	KEGG: drm:Dred_0594 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase
YP_004545532.1	KEGG: drm:Dred_1876 hypothetical protein
YP_004545533.1	KEGG: drm:Dred_1875 hypothetical protein
YP_004545534.1	KEGG: drm:Dred_1874 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR
YP_004545535.1	KEGG: sat:SYN_01170 putative cytoplasmic protein
YP_004545536.1	PFAM: protein of unknown function DUF134; KEGG: dhd:Dhaf_1981 protein of unknown function DUF134
YP_004545537.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: ckr:CKR_3218 hypothetical protein
YP_004545538.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: amt:Amet_1464 dinitrogenase iron-molybdenum cofactor biosynthesis protein
YP_004545539.1	KEGG: dsy:DSY3440 hypothetical protein
YP_004545540.1	KEGG: dhd:Dhaf_1984 cobyrinic acid ac-diamide synthase
YP_004545541.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dhd:Dhaf_1986 dinitrogenase iron-molybdenum cofactor biosynthesis protein
YP_004545542.1	KEGG: drm:Dred_1873 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region
YP_004545543.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: pth:PTH_1355 transcriptional regulator; SMART: AAA ATPase; PAS domain containing protein
YP_004545544.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: drm:Dred_1872 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region
YP_004545545.1	KEGG: drm:Dred_1871 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region
YP_004545546.1	PFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: hmo:HM1_2773 phosphoenolpyruvate carboxykinase
YP_004545547.1	TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: drm:Dred_1870 succinate dehydrogenase/fumarate reductase cytochrome b subunit
YP_004545548.1	TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: drm:Dred_1869 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004545549.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: drm:Dred_1868 succinate dehydrogenase iron-sulfur subunit
YP_004545550.1	KEGG: drm:Dred_1867 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase
YP_004545551.1	KEGG: hmo:HM1_2078 transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004545552.1	PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1866 hypothetical protein
YP_004545554.1	KEGG: dae:Dtox_2758 hypothetical protein
YP_004545555.1	PFAM: cell cycle protein; KEGG: lmo:lmo0421 hypothetical protein
YP_004545556.1	PFAM: transcriptional regulator PadR family protein; KEGG: bcz:BCZK0943 lineage-specific thermal regulator protein
YP_004545557.1	KEGG: bcr:BCAH187_A1202 RNA polymerase factor sigma C; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_004545558.1	KEGG: drm:Dred_1865 hypothetical protein
YP_004545559.1	KEGG: drm:Dred_1864 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_004545560.1	KEGG: drm:Dred_1863 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein
YP_004545561.1	KEGG: drm:Dred_1862 hypothetical protein
YP_004545562.1	PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1861 hypothetical protein
YP_004545564.1	PFAM: UspA domain-containing protein; KEGG: drm:Dred_1860 UspA domain-containing protein
YP_004545566.1	KEGG: pjd:Pjdr2_1959 membrane protein AbrB duplication; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase
YP_004545567.1	KEGG: drm:Dred_1484 hypothetical protein
YP_004545568.1	KEGG: drm:Dred_1513 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004545569.1	KEGG: drm:Dred_1993 hypothetical protein
YP_004545570.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1512 hypothetical protein
YP_004545571.1	KEGG: tfu:Tfu_1354 transmembrane transport protein
YP_004545572.1	KEGG: drm:Dred_1511 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004545573.1	KEGG: drm:Dred_1510 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004545574.1	PFAM: protein of unknown function DUF342; KEGG: drm:Dred_1859 hypothetical protein
YP_004545575.1	KEGG: pth:PTH_0674 molybdate-binding domain-containing protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory
YP_004545576.1	PFAM: extracellular solute-binding protein family 1; KEGG: dae:Dtox_3447 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_004545577.1	KEGG: dae:Dtox_3448 NifC-like ABC-type porter; TIGRFAM: NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004545578.1	KEGG: dae:Dtox_3449 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase
YP_004545579.1	KEGG: dae:Dtox_3450 hypothetical protein
YP_004545580.1	PFAM: small multidrug resistance protein; KEGG: bcb:BCB4264_A4914 SugE protein
YP_004545581.1	PFAM: small multidrug resistance protein; KEGG: bcg:BCG9842_B0325 SugE protein
YP_004545582.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: dae:Dtox_4113 glycosyl transferase family 4
YP_004545583.1	KEGG: dhd:Dhaf_0941 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004545584.1	KEGG: dhd:Dhaf_0940 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004545585.1	KEGG: dhd:Dhaf_0935 Mur ligase middle domain protein
YP_004545586.1	PFAM: protein of unknown function DUF867; KEGG: dsy:DSY4392 hypothetical protein
YP_004545587.1	PFAM: NLP/P60 protein; KEGG: bpf:BpOF4_12040 C40 family peptidase
YP_004545588.1	KEGG: cce:Ccel_1657 hypothetical protein
YP_004545590.1	KEGG: aar:Acear_0658 hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein
YP_004545591.1	KEGG: bmr:BMI_I78 putative amino acid efflux protein, LysE family
YP_004545592.1	PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_1904 major facilitator transporter
YP_004545593.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: ckr:CKR_3312 phosphoenolpyruvate synthase
YP_004545594.1	PFAM: regulatory protein TetR; KEGG: cbe:Cbei_2064 TetR family transcriptional regulator
YP_004545595.1	KEGG: dsy:DSY1379 hypothetical protein
YP_004545596.1	KEGG: bwe:BcerKBAB4_1770 hypothetical protein
YP_004545597.1	KEGG: bss:BSUW23_10025 putative transcriptional regualtor; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004545598.1	KEGG: cbe:Cbei_3032 uncharacterized membrane protein
YP_004545599.1	KEGG: dae:Dtox_1334 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004545600.1	KEGG: pcu:pc1189 cytochrome o ubiquinol oxidase chain II CyoA
YP_004545601.1	KEGG: dae:Dtox_2812 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase
YP_004545602.1	PFAM: Methyltransferase type 11; KEGG: dae:Dtox_2159 methyltransferase type 12
YP_004545603.1	PFAM: SNARE associated Golgi protein; KEGG: ele:Elen_2985 SNARE associated Golgi protein
YP_004545604.1	KEGG: lsp:Bsph_4021 hypothetical protein
YP_004545605.1	KEGG: drm:Dred_3262 response regulator receiver protein; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver
YP_004545606.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: drm:Dred_3263 histidine kinase internal region
YP_004545608.1	manually curated; KEGG: cdl:CDR20291_1756 rna polymerase, sigma-24 subunit, ecf subfamily
YP_004545609.1	PFAM: ABC-2 type transporter; KEGG: dhd:Dhaf_3151 ABC-2 type transporter
YP_004545610.1	KEGG: dhd:Dhaf_3150 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545611.1	KEGG: dhd:Dhaf_3149 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR
YP_004545612.1	PFAM: microcompartments protein; KEGG: dhd:Dhaf_4890 microcompartments protein
YP_004545613.1	PFAM: Propanediol utilization protein; KEGG: drm:Dred_3265 propanediol utilization protein
YP_004545614.1	KEGG: drm:Dred_3266 acetaldehyde dehydrogenase (acetylating); TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase
YP_004545615.1	PFAM: microcompartments protein; KEGG: drm:Dred_3267 microcompartments protein
YP_004545616.1	PFAM: Ethanolamine utilisation EutQ family protein; KEGG: drm:Dred_3268 ethanolamine utilisation EutQ family protein
YP_004545617.1	PFAM: microcompartments protein; KEGG: drm:Dred_3269 microcompartments protein
YP_004545618.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; KEGG: drm:Dred_3270 respiratory-chain NADH dehydrogenase domain-containing protein
YP_004545619.1	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: drm:Dred_3271 ethanolamine utilization protein EutN/carboxysome structural protein CcmL
YP_004545620.1	PFAM: microcompartments protein; KEGG: drm:Dred_3272 microcompartments protein
YP_004545621.1	TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: drm:Dred_3273 ethanolamine utilization protein EutJ family protein
YP_004545622.1	KEGG: drm:Dred_3274 hypothetical protein
YP_004545623.1	KEGG: drm:Dred_3275 hypothetical protein
YP_004545624.1	PFAM: microcompartments protein; KEGG: drm:Dred_3276 microcompartments protein
YP_004545625.1	TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: drm:Dred_3277 glycyl-radical activating family protein; PFAM: Radical SAM domain protein
YP_004545626.1	KEGG: pca:Pcar_0942 hypothetical protein
YP_004545627.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pca:Pcar_0941 hypothetical protein
YP_004545628.1	PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; KEGG: drm:Dred_3278 formate C-acetyltransferase
YP_004545629.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_3279 iron-containing alcohol dehydrogenase
YP_004545630.1	KEGG: drm:Dred_3280 acetaldehyde dehydrogenase (acetylating); TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase
YP_004545631.1	PFAM: microcompartments protein; KEGG: dhd:Dhaf_4907 microcompartments protein
YP_004545632.1	PFAM: microcompartments protein; KEGG: dhd:Dhaf_4908 microcompartments protein
YP_004545633.1	PFAM: Choline/ethanolamine kinase; KEGG: drm:Dred_3288 choline/ethanolamine kinase
YP_004545634.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dhd:Dhaf_0851 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004545635.1	PFAM: glutaredoxin 2; KEGG: dhd:Dhaf_0626 thioredoxin domain protein
YP_004545636.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dhd:Dhaf_4910 type I phosphodiesterase/nucleotide pyrophosphatase
YP_004545637.1	KEGG: cci:CC1G_09323 2-methylcitrate dehydratase
YP_004545638.1	KEGG: cth:Cthe_0056 Ig-like, group 2
YP_004545639.1	KEGG: swo:Swol_0509 hypothetical protein
YP_004545640.1	KEGG: swo:Swol_0508 hypothetical protein
YP_004545641.1	KEGG: abu:Abu_0346 cytochrome c biogenesis protein
YP_004545642.1	KEGG: dmo:Dmoj_GI12949 GI12949 gene product from transcript GI12949-RA
YP_004545643.1	KEGG: dsy:DSY0824 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein
YP_004545644.1	KEGG: dae:Dtox_1585 hypothetical protein
YP_004545645.1	KEGG: dsy:DSY3578 hypothetical protein
YP_004545646.1	PFAM: metallophosphoesterase; KEGG: drm:Dred_0560 phosphodiesterase
YP_004545647.1	KEGG: swo:Swol_0936 regulator of arsenical resistance; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004545648.1	PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: swo:Swol_0937 arsenical resistance operon trans-acting repressor
YP_004545649.1	KEGG: swo:Swol_0938 arsenite-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA
YP_004545650.1	KEGG: drm:Dred_0558 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter
YP_004545651.1	PFAM: amino acid permease-associated region; KEGG: dae:Dtox_2802 amino acid permease-associated region
YP_004545652.1	KEGG: swo:Swol_0313 hypothetical protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE
YP_004545653.1	KEGG: dhd:Dhaf_2650 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004545654.1	KEGG: drm:Dred_1181 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004545655.1	KEGG: hvo:HVO_A0377 hydantoin racemase, putative; PFAM: Asp/Glu/hydantoin racemase
YP_004545656.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1566 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004545657.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: drm:Dred_1565 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004545658.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_1564 binding-protein-dependent transport systems inner membrane component
YP_004545659.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_1563 binding-protein-dependent transport systems inner membrane component
YP_004545660.1	PFAM: extracellular solute-binding protein family 5; KEGG: drm:Dred_1562 extracellular solute-binding protein
YP_004545661.1	PFAM: peptidase M24; creatinase; KEGG: aac:Aaci_1001 peptidase M24
YP_004545662.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: drm:Dred_1561 cupin 2 domain-containing protein
YP_004545663.1	KEGG: drm:Dred_1560 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase
YP_004545664.1	KEGG: drm:Dred_1559 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein
YP_004545665.1	KEGG: gka:GK2895 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004545666.1	PFAM: Uncharacterised conserved protein UCP020606; KEGG: mmb:Mmol_1707 hypothetical protein
YP_004545667.1	KEGG: drm:Dred_1829 hypothetical protein
YP_004545668.1	PFAM: Protein of unknown function DUF2157, membrane; KEGG: drm:Dred_1829 hypothetical protein
YP_004545669.1	KEGG: efa:EF1938 cation transporter E1-E2 family ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004545670.1	KEGG: dae:Dtox_3366 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; CHASE3 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004545671.1	KEGG: cac:CA_C3639 CRO repressor-like DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004545672.1	KEGG: cdf:CD1379 putative phage regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004545673.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gwc:GWCH70_1374 protein of unknown function DUF6 transmembrane
YP_004545674.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mta:Moth_2307 hypothetical protein
YP_004545675.1	PFAM: FAD linked oxidase domain protein; KEGG: gtn:GTNG_0371 glycolate oxidase subunit
YP_004545676.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pjd:Pjdr2_1915 short-chain dehydrogenase/reductase SDR
YP_004545677.1	KEGG: slp:Slip_1884 P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein
YP_004545678.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: dhd:Dhaf_3999 3-hydroxyacyl-CoA dehydrogenase NAD-binding
YP_004545679.1	TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: drm:Dred_2966 glycyl-radical activating family protein; PFAM: Radical SAM domain protein
YP_004545680.1	TIGRFAM: pyruvate formate-lyase; KEGG: aoe:Clos_2688 pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical
YP_004545681.1	KEGG: rxy:Rxyl_2260 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004545682.1	KEGG: dae:Dtox_3828 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC
YP_004545683.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: adg:Adeg_1644 copper amine oxidase domain protein
YP_004545684.1	PFAM: DSBA oxidoreductase; KEGG: drm:Dred_2656 polyketide biosynthesis dithiol-disulfide isomerase-like protein
YP_004545685.1	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: drm:Dred_0132 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004545686.1	PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: drm:Dred_0130 glycerol-3-phosphate responsive antiterminator
YP_004545687.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cac:CA_C3602 HD superfamily hydrolase
YP_004545688.1	PFAM: permease; KEGG: dae:Dtox_0336 permease
YP_004545689.1	PFAM: protein of unknown function DUF1980; KEGG: dae:Dtox_0337 protein of unknown function DUF1980
YP_004545690.1	KEGG: dae:Dtox_0339 hypothetical protein
YP_004545691.1	TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: drm:Dred_0038 pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein
YP_004545692.1	PFAM: small multidrug resistance protein; KEGG: drm:Dred_3289 small multidrug resistance protein
YP_004545693.1	PFAM: regulatory protein TetR; KEGG: oih:OB0995 transcriptional regulator
YP_004545694.1	TIGRFAM: formate acetyltransferase; KEGG: drm:Dred_0039 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical
YP_004545695.1	KEGG: drm:Dred_1528 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004545696.1	KEGG: drm:Dred_2292 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004545697.1	PFAM: amidohydrolase 2; KEGG: tjr:TherJR_1661 amidohydrolase 2
YP_004545698.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_0424 hypothetical protein
YP_004545699.1	KEGG: pth:PTH_1837 hypothetical protein
YP_004545700.1	KEGG: pth:PTH_1838 hypothetical protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein
YP_004545701.1	KEGG: pth:PTH_1839 hypothetical protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein
YP_004545702.1	PFAM: GerA spore germination protein; KEGG: pth:PTH_1840 hypothetical protein
YP_004545703.1	KEGG: afn:Acfer_0135 lysine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_004545704.1	KEGG: drm:Dred_1804 GatB/YqeY domain-containing protein
YP_004545705.1	PFAM: major facilitator superfamily MFS_1; KEGG: bwe:BcerKBAB4_2580 major facilitator transporter
YP_004545706.1	KEGG: drm:Dred_1803 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_004545707.1	KEGG: drm:Dred_1802 hypothetical protein
YP_004545708.1	KEGG: drm:Dred_1801 hypothetical protein
YP_004545709.1	PFAM: glycosyl transferase group 1; KEGG: drm:Dred_1800 glycosyl transferase, group 1
YP_004545710.1	PFAM: Late competence development protein ComFB; KEGG: drm:Dred_1799 hypothetical protein
YP_004545711.1	KEGG: drm:Dred_1798 6-phosphofructokinase; TIGRFAM: phosphofructokinase; PFAM: phosphofructokinase
YP_004545712.1	PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2240 extracellular ligand-binding receptor
YP_004545713.1	PFAM: protein of unknown function UPF0182; KEGG: drm:Dred_1797 hypothetical protein
YP_004545714.1	KEGG: dau:Daud_1114 hypothetical protein
YP_004545715.1	TIGRFAM: D-alanine/D-alanine ligase; KEGG: drm:Dred_1796 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein
YP_004545716.1	KEGG: drm:Dred_1794 hydrogenase large subunit; PFAM: hydrogenase large subunit domain protein
YP_004545717.1	KEGG: eel:EUBELI_01840 hypothetical protein
YP_004545718.1	PFAM: protein of unknown function DUF1538; KEGG: str:Sterm_0908 protein of unknown function DUF1538
YP_004545719.1	PFAM: CBS domain containing protein; KEGG: bpf:BpOF4_21624 CBS domain containing membrane protein
YP_004545720.1	KEGG: drm:Dred_1527 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase
YP_004545721.1	KEGG: aoe:Clos_1087 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase
YP_004545722.1	PFAM: zinc/iron permease; KEGG: lsp:Bsph_4352 zinc transporter ZupT
YP_004545723.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ckr:CKR_3387 hypothetical protein
YP_004545724.1	KEGG: tmt:Tmath_1409 copper amine oxidase domain protein; PFAM: copper amine oxidase-like domain-containing protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein
YP_004545725.1	PFAM: Protein of unknown function DUF2512; KEGG: nth:Nther_1861 hypothetical protein
YP_004545727.1	SMART: Elongator protein 3/MiaB/NifB; KEGG: clj:CLJU_c22770 radical SAM domain-containing protein
YP_004545728.1	KEGG: gtn:GTNG_1424 hypothetical protein
YP_004545729.1	KEGG: dau:Daud_0832 hypothetical protein
YP_004545730.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: gym:GYMC10_3473 phosphoenolpyruvate synthase
YP_004545731.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dhd:Dhaf_0729 protein of unknown function DUF6 transmembrane
YP_004545732.1	PFAM: cyclase family protein; KEGG: tle:Tlet_0260 cyclase family protein
YP_004545733.1	PFAM: Radical SAM domain protein; KEGG: dal:Dalk_4338 radical SAM domain protein
YP_004545734.1	PFAM: cyclase/dehydrase; KEGG: cpo:COPRO5265_0653 polyketide cyclase/dehydrase superfamily
YP_004545735.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: nde:NIDE0700 putative dihydroflavanol 4-reductase
YP_004545736.1	KEGG: rci:LRC395 hypothetical protein
YP_004545737.1	PFAM: Methyltransferase type 11; KEGG: bpf:BpOF4_20064 SAM-dependent methyltransferase
YP_004545738.1	KEGG: cbt:CLH_0633 putative arylesterase
YP_004545739.1	KEGG: afl:Aflv_2139 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase
YP_004545740.1	PFAM: Beta-ketoacyl synthase; KEGG: tjr:TherJR_2071 3-oxoacyl-(acyl-carrier-protein) synthase 2
YP_004545741.1	KEGG: stp:Strop_3246 hypothetical protein
YP_004545742.1	PFAM: ABC-2 type transporter; KEGG: cac:CA_C3268 hypothetical protein
YP_004545743.1	KEGG: ckr:CKR_3098 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545744.1	PFAM: secretion protein HlyD family protein; KEGG: tjr:TherJR_1943 secretion protein HlyD family protein
YP_004545745.1	KEGG: rno:81653 drebrin 1
YP_004545746.1	KEGG: drm:Dred_1762 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein
YP_004545747.1	KEGG: drm:Dred_1761 polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein
YP_004545748.1	KEGG: drm:Dred_1322 small, acid-soluble spore proteins, alpha/be
YP_004545749.1	KEGG: drm:Dred_1760 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE
YP_004545750.1	KEGG: pth:PTH_1398 hypothetical protein
YP_004545751.1	TIGRFAM: GTP cyclohydrolase I; KEGG: drm:Dred_1758 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_004545752.1	PFAM: Radical SAM domain protein; KEGG: drm:Dred_1757 radical SAM domain-containing protein
YP_004545753.1	PFAM: protein of unknown function DUF366; KEGG: drm:Dred_1756 hypothetical protein
YP_004545754.1	KEGG: drm:Dred_1755 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like
YP_004545755.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: drm:Dred_1754 putative 6-pyruvoyl tetrahydropterin synthase
YP_004545756.1	PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1753 TPR repeat-containing protein
YP_004545757.1	KEGG: drm:Dred_1752 hypothetical protein
YP_004545758.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: drm:Dred_1749 thioredoxin-disulfide reductase
YP_004545759.1	PFAM: Heavy metal transport/detoxification protein; KEGG: hmo:HM1_1698 copper ion binding protein, putative
YP_004545760.1	KEGG: dae:Dtox_2078 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase
YP_004545762.1	KEGG: cdu:CD36_19410 LAS seventeen-binding protein 3, putative
YP_004545763.1	PFAM: Radical SAM domain protein; KEGG: drm:Dred_1747 radical SAM domain-containing protein
YP_004545764.1	KEGG: drm:Dred_1746 hypothetical protein
YP_004545765.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: drm:Dred_1745 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004545766.1	KEGG: drm:Dred_1744 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004545767.1	SMART: Exonuclease; helicase c2; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: drm:Dred_1743 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; type III restriction protein res subunit
YP_004545768.1	KEGG: drm:Dred_1742 hypothetical protein
YP_004545769.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: drm:Dred_1741 peptidylprolyl isomerase
YP_004545770.1	PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: drm:Dred_2150 thiamine biosynthesis protein ThiH
YP_004545771.1	KEGG: aar:Acear_0651 radical SAM domain protein
YP_004545772.1	PFAM: protein of unknown function DUF156; KEGG: cbe:Cbei_3063 hypothetical protein
YP_004545773.1	KEGG: cbe:Cbei_3064 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004545774.1	KEGG: ckl:CKL_2718 hypothetical protein
YP_004545775.1	KEGG: drm:Dred_2640 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004545776.1	KEGG: drm:Dred_2641 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004545777.1	KEGG: drm:Dred_2642 hypothetical protein
YP_004545778.1	PFAM: small multidrug resistance protein; KEGG: dhd:Dhaf_1073 small multidrug resistance protein
YP_004545779.1	PFAM: small multidrug resistance protein; KEGG: esi:Exig_0411 small multidrug resistance protein
YP_004545780.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dae:Dtox_1282 protein of unknown function DUF224 cysteine-rich region domain protein
YP_004545781.1	PFAM: ATPase-like, ParA/MinD; KEGG: drm:Dred_0660 nucleotide-binding protein
YP_004545782.1	KEGG: cbe:Cbei_2221 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_004545783.1	KEGG: cbe:Cbei_2222 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE
YP_004545784.1	PFAM: pentapeptide repeat protein; KEGG: cbh:CLC_0905 pentapeptide repeat-containing protein
YP_004545785.1	SMART: regulatory protein MerR; KEGG: dsy:DSY1408 hypothetical protein
YP_004545786.1	KEGG: drm:Dred_1740 metal-dependent hydrolase
YP_004545787.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; KEGG: chy:CHY_0913 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein
YP_004545788.1	TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: hmo:HM1_0374 succinyl-coa synthase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase
YP_004545789.1	KEGG: drm:Dred_1739 hypothetical protein
YP_004545790.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; amino acid-binding ACT domain protein; KEGG: dhd:Dhaf_1326 putative sigma54 specific transcriptional regulator; SMART: PAS domain containing protein; AAA ATPase
YP_004545791.1	KEGG: toc:Toce_1565 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase
YP_004545792.1	KEGG: amt:Amet_4431 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase
YP_004545793.1	KEGG: nth:Nther_2702 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR
YP_004545794.1	PFAM: transcriptional regulator domain-containing protein; KEGG: drm:Dred_1738 response regulator receiver protein
YP_004545795.1	KEGG: pth:PTH_1558 DNA-directed RNA polymerase specialized sigma subunit; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_004545796.1	KEGG: dae:Dtox_2766 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver
YP_004545797.1	KEGG: mac:MA1195 hypothetical protein
YP_004545798.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004545799.1	KEGG: ttm:Tthe_2271 hypothetical protein
YP_004545800.1	KEGG: drm:Dred_1736 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004545801.1	PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: drm:Dred_1735 heat repeat-containing PBS lyase
YP_004545802.1	KEGG: sth:STH2455 hypothetical protein
YP_004545803.1	KEGG: drm:Dred_1734 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein
YP_004545804.1	KEGG: drm:Dred_1733 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein
YP_004545805.1	PFAM: GerA spore germination protein; KEGG: drm:Dred_1732 GerA spore germination protein
YP_004545806.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: hmo:HM1_2762 2-oxoglutarate oxidoreductase, gamma subunit, putative
YP_004545807.1	KEGG: hmo:HM1_2763 2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein
YP_004545808.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
YP_004545809.1	KEGG: aco:Amico_0794 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004545810.1	PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1730 FAD dependent oxidoreductase
YP_004545811.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: drm:Dred_1729 BFD/(2Fe-2S)-binding domain-containing protein
YP_004545812.1	KEGG: drm:Dred_1728 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004545813.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fpl:Ferp_2556 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004545814.1	KEGG: tko:TK0119 proline dehydrogenase, alpha subunit
YP_004545815.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; CBS domain containing protein; helix-turn-helix Fis-type; KEGG: drm:Dred_1725 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase; PAS domain containing protein
YP_004545816.1	KEGG: drm:Dred_1724 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545817.1	KEGG: drm:Dred_1723 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545818.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_1722 inner-membrane translocator
YP_004545819.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_1721 inner-membrane translocator
YP_004545820.1	PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_1720 extracellular ligand-binding receptor
YP_004545821.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: drm:Dred_1719 sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase
YP_004545822.1	KEGG: drm:Dred_2236 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545823.1	KEGG: drm:Dred_2237 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545824.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2238 inner-membrane translocator
YP_004545825.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2239 inner-membrane translocator
YP_004545826.1	PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2240 extracellular ligand-binding receptor
YP_004545827.1	PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB
YP_004545828.1	PFAM: transposase IS3/IS911 family protein; KEGG: bmj:BMULJ_05181 ISBmu5a transposase
YP_004545829.1	PFAM: purine or other phosphorylase family 1; KEGG: aar:Acear_1899 purine or other phosphorylase family 1
YP_004545830.1	KEGG: drm:Dred_1718 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein
YP_004545831.1	KEGG: drm:Dred_1717 hypothetical protein
YP_004545832.1	KEGG: tjr:TherJR_1331 hypothetical protein
YP_004545833.1	TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: drm:Dred_1716 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase
YP_004545834.1	KEGG: drm:Dred_1715 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC
YP_004545835.1	KEGG: drm:Dred_1714 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein
YP_004545836.1	KEGG: drm:Dred_1713 penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase
YP_004545837.1	PFAM: cell cycle protein; KEGG: drm:Dred_1712 cell cycle protein
YP_004545838.1	KEGG: drm:Dred_1711 protein phosphatase 2C domain-containing protein; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein
YP_004545839.1	KEGG: drm:Dred_1710 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein
YP_004545840.1	KEGG: drm:Dred_1709 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein
YP_004545841.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: drm:Dred_1708 radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_004545842.1	KEGG: drm:Dred_1707 sun protein; TIGRFAM: sun protein; transcription antitermination factor NusB; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44
YP_004545843.1	PFAM: protein of unknown function DUF116; KEGG: drm:Dred_1706 hypothetical protein
YP_004545844.1	KEGG: drm:Dred_1705 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein
YP_004545845.1	KEGG: drm:Dred_1704 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_004545846.1	TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: drm:Dred_1703 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein
YP_004545847.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: drm:Dred_1702 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein
YP_004545848.1	KEGG: drm:Dred_1701 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6
YP_004545849.1	KEGG: drm:Dred_1700 guanylate kinase; PFAM: guanylate kinase; manually curated; TIGRFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region
YP_004545850.1	PFAM: protein of unknown function DUF370; KEGG: drm:Dred_1699 hypothetical protein
YP_004545851.1	PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: drm:Dred_1698 hypothetical protein
YP_004545852.1	TIGRFAM: sporulation protein, yteA family; KEGG: drm:Dred_1697 TraR/DksA family transcriptional regulator
YP_004545853.1	PFAM: aminotransferase class I and II; KEGG: drm:Dred_1696 aminotransferase, class I and II
YP_004545854.1	KEGG: drm:Dred_1695 LL-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II
YP_004545855.1	TIGRFAM: diaminopimelate epimerase; KEGG: drm:Dred_1694 diaminopimelate epimerase; PFAM: diaminopimelate epimerase
YP_004545856.1	PFAM: Collagen triple helix repeat-containing protein; KEGG: bcq:BCQ_4541 collagen triple helix repeat domain protein
YP_004545857.1	manually curated; KEGG: pjd:Pjdr2_1632 hypothetical protein
YP_004545858.1	KEGG: mhu:Mhun_2078 TPR repeat-containing protein
YP_004545859.1	KEGG: drm:Dred_1692 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004545860.1	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: drm:Dred_1691 fibronectin-binding A domain-containing protein
YP_004545861.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: drm:Dred_1690 type I phosphodiesterase/nucleotide pyrophosphatase
YP_004545862.1	KEGG: drm:Dred_1689 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004545863.1	KEGG: drm:Dred_1688 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II
YP_004545864.1	TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: drm:Dred_1687 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_004545865.1	KEGG: dae:Dtox_2350 dihydroorotate dehydrogenase 1B; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase
YP_004545866.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: drm:Dred_1685 oxidoreductase FAD/NAD(P)-binding subunit
YP_004545867.1	KEGG: drm:Dred_1684 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein
YP_004545868.1	KEGG: drm:Dred_1683 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I
YP_004545869.1	TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: drm:Dred_1682 dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_004545870.1	TIGRFAM: aspartate carbamoyltransferase; KEGG: drm:Dred_1681 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region
YP_004545871.1	KEGG: drm:Dred_1680 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004545872.1	KEGG: drm:Dred_1679 hypothetical protein
YP_004545873.1	PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1678 major facilitator transporter
YP_004545874.1	KEGG: drm:Dred_1677 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase ComA
YP_004545875.1	PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_4628 transcriptional regulator, TetR family
YP_004545876.1	KEGG: dsy:DSY4741 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004545877.1	KEGG: dsy:DSY4742 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004545878.1	KEGG: gdj:Gdia_2793 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004545879.1	KEGG: ddi:DDB_G0295483 RUN domain-containing protein
YP_004545880.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: ckr:CKR_0486 hypothetical protein
YP_004545881.1	PFAM: Domain of unknown function DUF1801; KEGG: rci:RCIX1712 hypothetical protein
YP_004545882.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: clj:CLJU_c30680 putative response regulator; SMART: GGDEF domain containing protein
YP_004545883.1	KEGG: ttm:Tthe_0372 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein
YP_004545884.1	KEGG: adg:Adeg_0296 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein
YP_004545885.1	PFAM: GerA spore germination protein; KEGG: dae:Dtox_0585 GerA spore germination protein
YP_004545886.1	KEGG: dae:Dtox_0584 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein
YP_004545887.1	KEGG: dae:Dtox_0583 hypothetical protein
YP_004545888.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: mta:Moth_2018 ferredoxin-dependent glutamate synthase
YP_004545889.1	PFAM: protein of unknown function DUF441; KEGG: drm:Dred_1676 hypothetical protein
YP_004545890.1	KEGG: drm:Dred_1675 hypothetical protein
YP_004545891.1	KEGG: dol:Dole_0298 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K
YP_004545892.1	PFAM: hydrogenase expression/synthesis HypA; KEGG: dol:Dole_1517 hydrogenase nickel insertion protein HypA
YP_004545893.1	manually curated; TIGRFAM: hydrogenase expression/formation protein HypE; KEGG: tjr:TherJR_1303 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_004545894.1	KEGG: tye:THEYE_A1019 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein
YP_004545895.1	KEGG: dal:Dalk_2013 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC)
YP_004545896.1	KEGG: tjr:TherJR_1300 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase
YP_004545897.1	manually curated; TIGRFAM: hydrogenase maturation protease; KEGG: slp:Slip_0388 hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein
YP_004545898.1	KEGG: dau:Daud_1941 (Ni/Fe) hydrogenase, b-type cytochrome subunit
YP_004545899.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: dau:Daud_1940 hydrogen:quinone oxidoreductase
YP_004545900.1	TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: dau:Daud_1939 hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_004545901.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: drm:Dred_1673 RluA family pseudouridine synthase; SMART: RNA-binding S4 domain protein
YP_004545902.1	PFAM: protein of unknown function DUF711; KEGG: drm:Dred_1672 hypothetical protein
YP_004545903.1	PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_1671 hypothetical protein
YP_004545904.1	KEGG: drm:Dred_1670 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein
YP_004545905.1	KEGG: drm:Dred_1669 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein
YP_004545906.1	KEGG: drm:Dred_1668 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004545907.1	KEGG: drm:Dred_1667 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein
YP_004545908.1	TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: drm:Dred_1666 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_004545909.1	KEGG: drm:Dred_1665 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_004545910.1	KEGG: drm:Dred_1664 hypothetical protein
YP_004545911.1	PFAM: protein of unknown function DUF208; KEGG: drm:Dred_1663 hypothetical protein
YP_004545912.1	KEGG: chy:CHY_0834 hypothetical protein
YP_004545913.1	TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: drm:Dred_1662 Holliday junction DNA helicase RuvB; SMART: AAA ATPase
YP_004545914.1	KEGG: drm:Dred_1661 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein
YP_004545915.1	TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: drm:Dred_1660 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC
YP_004545916.1	KEGG: drm:Dred_1659 hypothetical protein
YP_004545917.1	PFAM: protein of unknown function DUF28; KEGG: drm:Dred_1658 hypothetical protein
YP_004545918.1	TIGRFAM: NAD+ synthetase; KEGG: drm:Dred_1657 NAD+ synthetase
YP_004545919.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: drm:Dred_1656 NADH dehydrogenase (ubiquinone), 24 kDa subunit
YP_004545920.1	KEGG: drm:Dred_1655 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004545921.1	KEGG: drm:Dred_1654 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit
YP_004545923.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: drm:Dred_1653 NADH dehydrogenase (ubiquinone), 24 kDa subunit
YP_004545924.1	KEGG: drm:Dred_1652 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004545925.1	KEGG: drm:Dred_1651 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit
YP_004545926.1	KEGG: drm:Dred_1411 hypothetical protein
YP_004545927.1	KEGG: pth:PTH_1120 hypothetical protein
YP_004545928.1	PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1410 glycosyl transferase family protein
YP_004545929.1	PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1409 glycosyl transferase family protein
YP_004545930.1	PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_1408 glycosyl transferase family protein
YP_004545931.1	KEGG: pth:PTH_1117 hypothetical protein
YP_004545932.1	PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_1650 hypothetical protein
YP_004545933.1	KEGG: drm:Dred_1297 reactivating factor for ethanolamine ammonia lyase; manually curated; PFAM: Ethanolamine utilisation EutA
YP_004545934.1	KEGG: drm:Dred_1296 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain
YP_004545935.1	KEGG: drm:Dred_1295 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit
YP_004545936.1	KEGG: drm:Dred_1294 ethanolamine transproter; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region
YP_004545937.1	KEGG: drm:Dred_1293 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004545938.1	KEGG: drm:Dred_1292 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004545939.1	manually curated; PFAM: response regulator receiver; ANTAR domain protein; KEGG: drm:Dred_1289 response regulator receiver/ANTAR domain-containing protein; SMART: response regulator receiver
YP_004545940.1	TIGRFAM: dihydroxy-acid dehydratase; KEGG: aar:Acear_1923 dihydroxyacid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_004545941.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: tpd:Teth39_1970 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004545942.1	KEGG: tpd:Teth39_1971 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase
YP_004545943.1	PFAM: PfkB domain protein; KEGG: tpd:Teth39_1972 ribokinase-like domain-containing protein
YP_004545944.1	KEGG: tpd:Teth39_1974 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase
YP_004545945.1	KEGG: tpd:Teth39_1975 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR
YP_004545946.1	KEGG: tpd:Teth39_1977 hypothetical protein
YP_004545947.1	KEGG: gka:GK1972 transporter; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004545948.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vap:Vapar_3328 tripartite ATP-independent periplasmic transporter DctQ component
YP_004545949.1	KEGG: gka:GK1974 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein); TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7
YP_004545950.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: oih:OB2815 dehydrogenase
YP_004545951.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pth:PTH_2894 dehydrogenases with different specificities
YP_004545952.1	PFAM: protein of unknown function DUF161; KEGG: aar:Acear_0727 protein of unknown function DUF161
YP_004545953.1	KEGG: drm:Dred_1648 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like
YP_004545954.1	TIGRFAM: penicillin-binding protein, 1A family; KEGG: drm:Dred_1646 1A family penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_004545955.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dau:Daud_0439 hypothetical protein
YP_004545956.1	KEGG: hmo:HM1_1691 abc transporter, permease protein, putative
YP_004545957.1	KEGG: hmo:HM1_1690 abc transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004545958.1	KEGG: hmo:HM1_1689 hypothetical protein
YP_004545959.1	manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: dae:Dtox_1805 RNA polymerase sigma factor SigX; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_004545960.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dhd:Dhaf_1751 diguanylate cyclase; SMART: GGDEF domain containing protein
YP_004545961.1	PFAM: metallophosphoesterase; KEGG: drm:Dred_0745 metallophosphoesterase
YP_004545962.1	PFAM: type III secretion exporter; KEGG: hmo:HM1_2194 FlhB domain protein, putative
YP_004545963.1	KEGG: hmo:HM1_2193 hypothetical protein
YP_004545964.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: aar:Acear_1889 superoxide dismutase copper/zinc binding protein
YP_004545965.1	PFAM: protein of unknown function DUF55; KEGG: rrs:RoseRS_2489 hypothetical protein
YP_004545966.1	TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: drm:Dred_1642 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase
YP_004545967.1	TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: drm:Dred_1641 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase
YP_004545968.1	KEGG: drm:Dred_1640 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_004545969.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: drm:Dred_1639 cytochrome bd ubiquinol oxidase, subunit I
YP_004545970.1	KEGG: mta:Moth_2094 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_004545972.1	KEGG: ani:AN8977.2 hypothetical protein
YP_004545973.1	KEGG: tjr:TherJR_2742 hypothetical protein
YP_004545974.1	KEGG: cbi:CLJ_B1962 putative surface protein
YP_004545975.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3937 GCN5-related N-acetyltransferase
YP_004545976.1	KEGG: smf:Smon_0577 RNA polymerase, sigma 32 subunit, RpoH
YP_004545977.1	KEGG: lba:Lebu_2280 oxaloacetate decarboxylase
YP_004545978.1	KEGG: cdl:CDR20291_1075 hypothetical protein
YP_004545979.1	TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; KEGG: drm:Dred_1638 MutS2 family protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2
YP_004545980.1	PFAM: peptidase U32; KEGG: drm:Dred_1637 peptidase U32
YP_004545981.1	KEGG: drm:Dred_1636 hypothetical protein
YP_004545982.1	TIGRFAM: DNA-3-methyladenine glycosylase; KEGG: drm:Dred_1635 DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG)
YP_004545983.1	KEGG: drm:Dred_1634 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein
YP_004545984.1	PFAM: protein of unknown function DUF710; KEGG: drm:Dred_1633 hypothetical protein
YP_004545985.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mta:Moth_2476 transporter
YP_004545986.1	KEGG: drm:Dred_1620 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit
YP_004545987.1	KEGG: drm:Dred_1619 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein
YP_004545988.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: drm:Dred_1618 tRNA/rRNA methyltransferase (SpoU)
YP_004545989.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: drm:Dred_1617 TrkA domain-containing protein
YP_004545990.1	TIGRFAM: potassium uptake protein, TrkH family; KEGG: drm:Dred_1616 TrkH family potassium uptake protein; PFAM: cation transporter
YP_004545991.1	KEGG: drm:Dred_1615 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20
YP_004545992.1	KEGG: drm:Dred_1614 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35
YP_004545993.1	KEGG: drm:Dred_1613 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like
YP_004545994.1	KEGG: drm:Dred_1612 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein
YP_004545995.1	PFAM: protein of unknown function DUF445; KEGG: drm:Dred_1611 hypothetical protein
YP_004545996.1	KEGG: drm:Dred_1610 hypothetical protein; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC
YP_004545997.1	KEGG: drm:Dred_1609 hypothetical protein
YP_004545998.1	KEGG: pth:PTH_2035 periplasmic serine proteases
YP_004545999.1	KEGG: nth:Nther_2058 hypothetical protein
YP_004546000.1	KEGG: drm:Dred_2836 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein
YP_004546001.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; CBS domain containing protein; PAS fold domain protein; KEGG: drm:Dred_2835 putative PAS/PAC sensor protein; SMART: AAA ATPase; CBS domain containing protein
YP_004546002.1	PFAM: Na+/solute symporter; KEGG: drm:Dred_2834 Na+/solute symporter
YP_004546003.1	PFAM: OsmC family protein; KEGG: drm:Dred_2833 OsmC family protein
YP_004546004.1	KEGG: drm:Dred_2832 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_004546005.1	KEGG: cbe:Cbei_1888 ground-like protein
YP_004546006.1	KEGG: tet:TTHERM_00316330 Protein phosphatase 2C containing protein
YP_004546007.1	KEGG: mbu:Mbur_1752 hypothetical protein
YP_004546008.1	KEGG: fno:Fnod_0753 nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein)
YP_004546009.1	KEGG: ton:TON_0715 hypothetical protein
YP_004546010.1	KEGG: drm:Dred_1606 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein
YP_004546011.1	KEGG: drm:Dred_1605 polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase
YP_004546012.1	KEGG: pth:PTH_0666 signaling protein; PFAM: EAL domain protein; SMART: EAL domain protein
YP_004546013.1	PFAM: SNARE associated Golgi protein; KEGG: drm:Dred_1602 hypothetical protein
YP_004546014.1	PFAM: SNARE associated Golgi protein; KEGG: drm:Dred_1601 hypothetical protein
YP_004546015.1	TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1600 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_004546016.1	TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: drm:Dred_1599 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase
YP_004546017.1	TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: drm:Dred_1598 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding
YP_004546018.1	KEGG: drm:Dred_1597 hypothetical protein; TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204
YP_004546019.1	TIGRFAM: dephospho-CoA kinase; KEGG: drm:Dred_1596 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_004546020.1	PFAM: Lytic transglycosylase catalytic; KEGG: drm:Dred_1595 lytic transglycosylase, catalytic
YP_004546021.1	PFAM: regulatory protein TetR; KEGG: drm:Dred_1590 TetR family transcriptional regulator
YP_004546022.1	KEGG: drm:Dred_1589 ABC-2 type transporter; manually curated; PFAM: ABC-2 type transporter
YP_004546023.1	KEGG: drm:Dred_1588 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546024.1	KEGG: drm:Dred_1587 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546025.1	PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_1586 secretion protein HlyD family protein
YP_004546026.1	KEGG: drm:Dred_1585 putative PAS/PAC sensor protein; PFAM: PAS fold domain protein; Fe-S cluster domain protein; SMART: PAS domain containing protein
YP_004546027.1	KEGG: drm:Dred_1584 stage II sporulation E family protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein
YP_004546028.1	KEGG: mev:Metev_2155 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
YP_004546029.1	KEGG: dae:Dtox_2420 integrase family protein
YP_004546030.1	KEGG: dhd:Dhaf_2561 beta-lactamase domain protein
YP_004546031.1	KEGG: amt:Amet_4273 hypothetical protein
YP_004546032.1	PFAM: Coat F domain protein; KEGG: ccb:Clocel_0868 coat F domain-containing protein
YP_004546033.1	KEGG: amt:Amet_4659 hypothetical protein
YP_004546034.1	KEGG: drm:Dred_0115 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_004546035.1	KEGG: dae:Dtox_3726 hypothetical protein
YP_004546036.1	KEGG: dae:Dtox_3723 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004546037.1	KEGG: gka:GK3304 mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_004546038.1	PFAM: glycosyl transferase family 2; KEGG: nca:Noca_0721 general secretion pathway protein E
YP_004546039.1	PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_3097 glycosyl transferase family protein
YP_004546040.1	KEGG: mgi:Mflv_0209 hypothetical protein
YP_004546041.1	TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: drm:Dred_0974 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein
YP_004546042.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ccb:Clocel_3267 alcohol dehydrogenase GroES domain-containing protein
YP_004546043.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcu:BCAH820_1901 acetyltransferase, GNAT family
YP_004546044.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pth:PTH_0095 hypothetical protein
YP_004546045.1	PFAM: heat shock protein Hsp20; KEGG: gwc:GWCH70_2078 heat shock protein HSP20
YP_004546046.1	PFAM: regulatory protein LysR; KEGG: gym:GYMC10_4684 transcriptional regulator, LysR family
YP_004546047.1	PFAM: Methionine synthase vitamin-B12 independent; KEGG: cbe:Cbei_2330 methionine synthase, vitamin-B12 independent
YP_004546048.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: vap:Vapar_5519 mandelate racemase/muconate lactonizing protein
YP_004546049.1	PFAM: Collagen triple helix repeat-containing protein; KEGG: dhd:Dhaf_1008 collagen triple helix repeat protein
YP_004546050.1	KEGG: cce:Ccel_3349 hypothetical protein
YP_004546051.1	PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: dhd:Dhaf_4883 GreA/GreB family elongation factor
YP_004546052.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein
YP_004546053.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; chemotaxis sensory transducer; KEGG: bpu:BPUM_3598 sensor histidine kinase; SMART: chemotaxis sensory transducer; PAC repeat-containing protein
YP_004546054.1	PFAM: alpha/beta hydrolase fold; KEGG: dsy:DSY3823 hypothetical protein
YP_004546055.1	KEGG: tit:Thit_0239 dehydrogenase (flavoprotein)-like protein
YP_004546056.1	KEGG: gyc:GYMC61_2560 hypothetical protein
YP_004546057.1	TIGRFAM: Exosporium BclB-like; KEGG: aac:Aaci_2505 collagen triple helix repeat protein
YP_004546058.1	PFAM: glycosyl transferase family 2; KEGG: amt:Amet_3406 glycosyl transferase family protein
YP_004546059.1	KEGG: pth:PTH_2524 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004546060.1	KEGG: pth:PTH_2525 hypothetical protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1
YP_004546061.1	PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_0454 secretion protein HlyD
YP_004546062.1	KEGG: hmo:HM1_3095 secretion protein HlyD, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004546063.1	KEGG: bbe:BBR47_15070 probable ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546064.1	PFAM: protein of unknown function DUF214; KEGG: hmo:HM1_3093 hypothetical protein
YP_004546065.1	KEGG: pjd:Pjdr2_2128 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004546066.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dhd:Dhaf_3778 CDP-alcohol phosphatidyltransferase
YP_004546067.1	PFAM: Nitrogenase iron-iron accessory protein AnfO; KEGG: drm:Dred_2813 hypothetical protein
YP_004546068.1	KEGG: rsh:Rsph17029_3733 integrase catalytic subunit
YP_004546070.1	PFAM: Silent information regulator protein Sir2; KEGG: drm:Dred_2032 silent information regulator protein Sir2
YP_004546072.1	KEGG: drm:Dred_1474 type IV pilus assembly PilZ
YP_004546073.1	KEGG: drm:Dred_1473 ABC-type sugar transport system periplasmic component-like protein
YP_004546074.1	KEGG: dau:Daud_0314 appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein
YP_004546075.1	PFAM: protein of unknown function UPF0047; KEGG: rci:RCIX1907 hypothetical protein
YP_004546076.1	PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; KEGG: drm:Dred_1472 heat shock protein 90
YP_004546077.1	KEGG: chy:CHY_2436 putative lipoprotein protein
YP_004546078.1	KEGG: drm:Dred_2666 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein
YP_004546079.1	KEGG: drm:Dred_2664 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein
YP_004546080.1	PFAM: GerA spore germination protein; KEGG: drm:Dred_2663 GerA spore germination protein
YP_004546081.1	PFAM: Citrate transporter; KEGG: drm:Dred_1471 citrate transporter
YP_004546082.1	KEGG: deg:DehalGT_1378 hypothetical protein
YP_004546083.1	KEGG: det:DET1581 anti-oxidant AhpCTSA family protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like
YP_004546084.1	PFAM: NUDIX hydrolase; KEGG: spe:Spro_3231 NUDIX hydrolase
YP_004546085.1	KEGG: drm:Dred_1470 hypothetical protein
YP_004546086.1	PFAM: protein of unknown function DUF421; KEGG: drm:Dred_1469 hypothetical protein
YP_004546087.1	PFAM: protein of unknown function DUF1657; KEGG: aac:Aaci_0718 protein of unknown function DUF1657
YP_004546088.1	PFAM: protein of unknown function DUF1657; KEGG: drm:Dred_1467 hypothetical protein
YP_004546089.1	PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: drm:Dred_1466 hypothetical protein
YP_004546090.1	KEGG: drm:Dred_1465 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein
YP_004546091.1	KEGG: drm:Dred_1464 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein
YP_004546092.1	KEGG: drm:Dred_1463 SpoVA protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein
YP_004546093.1	PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: drm:Dred_1462 hypothetical protein
YP_004546094.1	PFAM: Restriction endonuclease BglII; KEGG: drm:Dred_1461 hypothetical protein
YP_004546095.1	KEGG: drm:Dred_1460 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004546096.1	TIGRFAM: 4-alpha-glucanotransferase; KEGG: drm:Dred_1459 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77
YP_004546097.1	KEGG: drm:Dred_1458 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_004546098.1	TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: drm:Dred_1457 glycogen/starch synthases, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1
YP_004546099.1	TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: drm:Dred_1456 glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase
YP_004546100.1	KEGG: drm:Dred_1455 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase
YP_004546101.1	TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: drm:Dred_1453 1,4-alpha-glucan branching enzyme; SMART: alpha amylase catalytic sub domain
YP_004546102.1	KEGG: dau:Daud_1904 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein
YP_004546103.1	KEGG: dhd:Dhaf_0246 hypothetical protein
YP_004546104.1	PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1452 hypothetical protein
YP_004546105.1	KEGG: pth:PTH_0667 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; SMART: chemotaxis sensory transducer
YP_004546106.1	KEGG: drm:Dred_1451 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004546107.1	PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: drm:Dred_1450 di-trans,poly-cis-decaprenylcistransferase
YP_004546108.1	KEGG: drm:Dred_1447 hypothetical protein
YP_004546109.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1446 hypothetical protein
YP_004546110.1	PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_1445 nitrate reductase, gamma subunit
YP_004546111.1	PFAM: O-methyltransferase family 3; KEGG: drm:Dred_1444 O-methyltransferase family protein
YP_004546112.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: drm:Dred_1443 LysR family transcriptional regulator
YP_004546113.1	TIGRFAM: hydrogenase, Fe-only; KEGG: drm:Dred_0463 hydrogenases, Fe-only; PFAM: hydrogenase large subunit domain protein; Twin-arginine translocation pathway, signal sequence, subgroup; iron hydrogenase small subunit
YP_004546114.1	KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004546115.1	PFAM: Polysulphide reductase NrfD; KEGG: drm:Dred_1116 polysulphide reductase, NrfD
YP_004546116.1	PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_1442 hypothetical protein
YP_004546117.1	KEGG: tbr:Tb927.8.6700 hypothetical protein
YP_004546118.1	KEGG: drm:Dred_1441 hypothetical protein
YP_004546119.1	KEGG: drm:Dred_1440 hydrogenase large subunit; PFAM: hydrogenase large subunit domain protein
YP_004546120.1	KEGG: drm:Dred_1439 hypothetical protein
YP_004546121.1	PFAM: HI0933 family protein; KEGG: drm:Dred_1437 hypothetical protein
YP_004546122.1	PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1436 FAD dependent oxidoreductase
YP_004546123.1	KEGG: acn:ACIS_00404 carbamoyl phosphate synthase large subunit
YP_004546124.1	KEGG: mac:MA0513 maltose O-acetyltransferase
YP_004546125.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: drm:Dred_1435 excinuclease ABC subunit C
YP_004546126.1	KEGG: drm:Dred_1434 beta-lactamase domain-containing protein
YP_004546128.1	PFAM: nitroreductase; KEGG: aar:Acear_1505 nitroreductase
YP_004546129.1	KEGG: dhd:Dhaf_3314 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein
YP_004546130.1	PFAM: protein of unknown function DUF107; KEGG: dhd:Dhaf_3316 protein of unknown function DUF107
YP_004546131.1	PFAM: PspA/IM30 family protein; KEGG: dhd:Dhaf_3317 phage shock protein A, PspA
YP_004546132.1	PFAM: major facilitator superfamily MFS_1; KEGG: dae:Dtox_3789 major facilitator superfamily MFS_1
YP_004546133.1	PFAM: major facilitator superfamily MFS_1; KEGG: lsp:Bsph_1900 putative transport protein
YP_004546134.1	KEGG: drm:Dred_1432 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546135.1	KEGG: drm:Dred_1607 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004546136.1	PFAM: NERD domain protein; KEGG: chy:CHY_1343 putative serine/threonine protein kinase
YP_004546137.1	KEGG: drm:Dred_1430 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004546138.1	KEGG: drm:Dred_1429 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_004546139.1	KEGG: drm:Dred_1428 hypothetical protein
YP_004546140.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1427 hypothetical protein
YP_004546141.1	KEGG: drm:Dred_1424 hypothetical protein
YP_004546142.1	KEGG: drm:Dred_1426 hypothetical protein
YP_004546143.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1425 hypothetical protein
YP_004546144.1	KEGG: drm:Dred_1424 hypothetical protein
YP_004546145.1	KEGG: drm:Dred_1423 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A
YP_004546146.1	KEGG: drm:Dred_1422 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_004546147.1	KEGG: drm:Dred_1421 hypothetical protein
YP_004546148.1	KEGG: drm:Dred_1420 hypothetical protein
YP_004546149.1	KEGG: drm:Dred_1416 UvrD-like DNA helicase, C terminal; TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase
YP_004546150.1	TIGRFAM: ATP-dependent nuclease subunit B; KEGG: drm:Dred_1415 UvrD-like DNA helicase, C terminal
YP_004546151.1	PFAM: Penicillinase repressor; KEGG: cbe:Cbei_3104 CopY family transcriptional regulator
YP_004546152.1	KEGG: cth:Cthe_1810 peptidase M56, BlaR1; PFAM: peptidase M56 BlaR1; cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_004546153.1	TIGRFAM: threonine synthase; KEGG: drm:Dred_1379 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004546154.1	PFAM: amino acid permease-associated region; KEGG: drm:Dred_1373 amino acid permease-associated region
YP_004546155.1	KEGG: hmo:HM1_2343 hydrolase, carbon-nitrogen family, putative; TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004546156.1	TIGRFAM: agmatine deiminase; KEGG: hmo:HM1_2344 Agmatine deiminase. putative; PFAM: Porphyromonas-type peptidyl-arginine deiminase
YP_004546157.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1372 hypothetical protein
YP_004546158.1	PFAM: FAD linked oxidase domain protein; KEGG: adg:Adeg_0562 FAD linked oxidase domain protein
YP_004546159.1	PFAM: Rubrerythrin; KEGG: dae:Dtox_1560 rubrerythrin
YP_004546160.1	KEGG: bfu:BC1G_07662 hypothetical protein
YP_004546161.1	PFAM: protein of unknown function DUF188; KEGG: drm:Dred_1370 hypothetical protein
YP_004546162.1	KEGG: drm:Dred_1368 HSP70 family ATPase
YP_004546163.1	TIGRFAM: alpha-glucan phosphorylase; KEGG: drm:Dred_1364 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_004546164.1	KEGG: dae:Dtox_3232 hypothetical protein
YP_004546165.1	PFAM: PRC-barrel domain protein; KEGG: dae:Dtox_3233 hypothetical protein
YP_004546166.1	PFAM: VanW family protein; G5 domain protein; KEGG: dae:Dtox_3234 VanW family protein
YP_004546167.1	manually curated; TIGRFAM: conserved hypothetical protein; KEGG: amt:Amet_3680 putative selenoprotein; PFAM: SelT/selW/selH selenoprotein
YP_004546168.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: drm:Dred_1362 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_004546169.1	KEGG: drm:Dred_1359 peptidase S16, lon domain-containing protein
YP_004546170.1	TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: drm:Dred_1358 putative radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_004546171.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: nth:Nther_0751 pyruvate phosphate dikinase PEP/pyruvate-binding
YP_004546172.1	PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2917 S-layer domain-containing protein
YP_004546173.1	KEGG: drm:Dred_1357 hypothetical protein
YP_004546174.1	KEGG: drm:Dred_1356 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546175.1	KEGG: drm:Dred_1355 hypothetical protein
YP_004546176.1	PFAM: WD40-like beta Propeller containing protein; KEGG: drm:Dred_1354 WD40 domain-containing protein
YP_004546177.1	KEGG: drm:Dred_1353 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_004546178.1	TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: drm:Dred_1352 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein
YP_004546179.1	KEGG: ptm:GSPATT00024236001 hypothetical protein
YP_004546180.1	PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1349 hypothetical protein
YP_004546181.1	KEGG: drm:Dred_1348 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase
YP_004546182.1	PFAM: Uncharacterised protein family UPF0302, N-terminal; Uncharacterised protein family UPF0302, C-terminal; KEGG: drm:Dred_1347 hypothetical protein
YP_004546183.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: drm:Dred_1346 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein
YP_004546184.1	PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: drm:Dred_1344 stress responsive alpha-beta barrel domain-containing protein
YP_004546185.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein
YP_004546186.1	KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: polysaccharide deacetylase; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat
YP_004546187.1	KEGG: cpy:Cphy_1600 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver
YP_004546188.1	PFAM: thioesterase superfamily protein; KEGG: cdl:CDR20291_0846 putative thioesterase
YP_004546189.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_0901 copper amine oxidase domain protein
YP_004546191.1	PFAM: Hsp33 protein; KEGG: drm:Dred_1343 HSP33 protein
YP_004546192.1	PFAM: AIG2 family protein; KEGG: dre:100149204 si:ch211-149a19.5
YP_004546193.1	KEGG: drm:Dred_1342 hypothetical protein
YP_004546194.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: drm:Dred_1315 acetyl-CoA hydrolase/transferase
YP_004546195.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: drm:Dred_1341 dinitrogenase iron-molybdenum cofactor biosynthesis
YP_004546196.1	PFAM: protein of unknown function DUF134; KEGG: drm:Dred_1340 hypothetical protein
YP_004546197.1	KEGG: dhd:Dhaf_2146 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004546198.1	KEGG: dsy:DSY1065 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004546199.1	KEGG: dhd:Dhaf_2148 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546200.1	PFAM: protein of unknown function DUF214; KEGG: dhd:Dhaf_2149 protein of unknown function DUF214
YP_004546201.1	PFAM: PspC domain protein; KEGG: drm:Dred_1339 phage shock protein C, PspC
YP_004546202.1	PFAM: protein of unknown function DUF1294; KEGG: drm:Dred_1338 hypothetical protein
YP_004546203.1	PFAM: Chromate transporter; KEGG: drm:Dred_1337 chromate transporter
YP_004546204.1	PFAM: L-asparaginase II; KEGG: drm:Dred_1336 L-asparaginase II
YP_004546205.1	PFAM: cell wall hydrolase SleB; KEGG: drm:Dred_1335 cell wall hydrolase, SleB
YP_004546206.1	KEGG: drm:Dred_1332 hypothetical protein
YP_004546207.1	KEGG: drm:Dred_1330 formate dehydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
YP_004546208.1	KEGG: drm:Dred_1329 methyl-viologen-reducing hydrogenase, delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit
YP_004546209.1	PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_1328 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004546210.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: drm:Dred_1327 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004546211.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1326 hypothetical protein
YP_004546212.1	KEGG: drm:Dred_1325 heterodisulfide reductase, C subunit
YP_004546214.1	KEGG: drm:Dred_1322 small, acid-soluble spore proteins, alpha/be
YP_004546215.1	PFAM: PP-loop domain protein; KEGG: drm:Dred_1321 PP-loop domain-containing protein
YP_004546216.1	KEGG: lil:LA_1813 hypothetical protein
YP_004546217.1	PFAM: protein of unknown function DUF552; KEGG: drm:Dred_1320 hypothetical protein
YP_004546218.1	PFAM: glutaredoxin; KEGG: drm:Dred_1319 hypothetical protein
YP_004546219.1	KEGG: drm:Dred_1318 phosphoribosyltransferase
YP_004546220.1	KEGG: drm:Dred_1317 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004546221.1	PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB
YP_004546222.1	PFAM: transposase IS3/IS911 family protein; KEGG: bmj:BMULJ_05181 ISBmu5a transposase
YP_004546223.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1316 hypothetical protein
YP_004546224.1	KEGG: bmq:BMQ_3615 major facilitator superfamily transporter
YP_004546225.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: drm:Dred_1315 acetyl-CoA hydrolase/transferase
YP_004546226.1	PFAM: hypothetical protein; KEGG: drm:Dred_1314 hypothetical protein
YP_004546227.1	PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1313 hypothetical protein
YP_004546228.1	KEGG: drm:Dred_1312 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004546229.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: drm:Dred_1311 sensory histidine kinase AtoS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_004546230.1	KEGG: dae:Dtox_2368 hypothetical protein
YP_004546231.1	PFAM: ABC-3 protein; KEGG: drm:Dred_2647 ABC-3 protein
YP_004546232.1	KEGG: drm:Dred_2646 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546233.1	PFAM: ferric-uptake regulator; KEGG: drm:Dred_2644 ferric uptake regulator family protein
YP_004546234.1	KEGG: drm:Dred_1310 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region
YP_004546235.1	PFAM: protein of unknown function DUF523; KEGG: drm:Dred_1309 hypothetical protein
YP_004546236.1	KEGG: drm:Dred_1307 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein
YP_004546237.1	KEGG: tva:TVAG_071430 hypothetical protein
YP_004546238.1	KEGG: drm:Dred_2777 hypothetical protein
YP_004546239.1	PFAM: Rubrerythrin; KEGG: mmx:MmarC6_1061 hypothetical protein
YP_004546240.1	KEGG: cob:COB47_1940 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004546241.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mmp:MMP0849 L-lysine/homoserine-homoserine lactone exporter family protein
YP_004546242.1	KEGG: pth:PTH_1965 hypothetical protein
YP_004546243.1	PFAM: nitroreductase; KEGG: mru:mru_0692 nitroreductase family protein
YP_004546244.1	KEGG: drm:Dred_0778 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase
YP_004546245.1	KEGG: drm:Dred_1572 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004546246.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: dau:Daud_2121 copper amine oxidase domain-containing protein
YP_004546247.1	KEGG: rbi:RB2501_06115 hypothetical protein
YP_004546248.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ckr:CKR_3002 hypothetical protein
YP_004546249.1	KEGG: drm:Dred_2930 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase
YP_004546250.1	KEGG: drm:Dred_2931 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546251.1	KEGG: drm:Dred_2932 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546252.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2933 inner-membrane translocator
YP_004546253.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2934 inner-membrane translocator
YP_004546254.1	PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2935 extracellular ligand-binding receptor
YP_004546255.1	PFAM: Protein of unknown function DUF2087; KEGG: gym:GYMC10_3986 protein of unknown function DUF2087
YP_004546256.1	PFAM: Protein of unknown function DUF2087; KEGG: cbe:Cbei_4073 regulatory protein, LuxR
YP_004546257.1	KEGG: bbe:BBR47_51340 hypothetical protein
YP_004546258.1	PFAM: NADPH-dependent FMN reductase; KEGG: ckr:CKR_2164 hypothetical protein
YP_004546259.1	PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: pjd:Pjdr2_1258 protein of unknown function UPF0029
YP_004546260.1	PFAM: ABC-1 domain-containing protein; aminoglycoside phosphotransferase; KEGG: gwc:GWCH70_1612 ABC-1 domain protein
YP_004546261.1	KEGG: cbe:Cbei_3310 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR
YP_004546262.1	KEGG: dhd:Dhaf_0018 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546263.1	KEGG: toc:Toce_0279 hypothetical protein
YP_004546264.1	PFAM: Uncharacterised protein family UPF0066; KEGG: ckr:CKR_0280 hypothetical protein
YP_004546265.1	KEGG: dhd:Dhaf_0495 response regulator receiver and SARP domain protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; transcriptional activator domain; SMART: response regulator receiver
YP_004546266.1	KEGG: bss:BSUW23_17900 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor transmembrane region; glycoside hydrolase family 2 sugar binding; response regulator receiver; histidine kinase internal region; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004546267.1	KEGG: pjd:Pjdr2_0886 cell wall/surface repeat protein; PFAM: S-layer domain-containing protein; Fibronectin type III domain protein; SMART: Immunoglobulin subtype; Immunoglobulin C2 type; Fibronectin type III domain protein
YP_004546268.1	KEGG: dhd:Dhaf_0543 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004546269.1	manually curated; KEGG: ckl:CKL_1929 hypothetical protein
YP_004546270.1	KEGG: aoe:Clos_2846 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004546271.1	KEGG: dhd:Dhaf_3957 hypothetical protein
YP_004546272.1	PFAM: regulatory protein TetR; KEGG: dsy:DSY2813 hypothetical protein
YP_004546273.1	PFAM: protein of unknown function DUF156; KEGG: ckr:CKR_0067 hypothetical protein
YP_004546274.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dhd:Dhaf_2294 protein of unknown function DUF6 transmembrane
YP_004546275.1	KEGG: ccb:Clocel_0494 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004546276.1	TIGRFAM: dihydroxy-acid dehydratase; KEGG: ccb:Clocel_0493 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_004546277.1	KEGG: drm:Dred_2028 hypothetical protein
YP_004546278.1	KEGG: bsu:BSU36990 hypothetical protein
YP_004546279.1	KEGG: dhd:Dhaf_2642 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004546280.1	KEGG: cat:CA2559_01880 hypothetical protein
YP_004546281.1	KEGG: clj:CLJU_c25490 SpoIID-like domain-containing protein
YP_004546282.1	PFAM: Holin toxin secretion/phage lysis; KEGG: gtn:GTNG_2759 prophage LambdaBa01, holin, putative
YP_004546283.1	KEGG: drm:Dred_3142 copper amine oxidase domain-containing protein
YP_004546284.1	KEGG: bai:BAA_3851 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004546285.1	KEGG: mca:MCA1163 nodulation protein nolNO, putative
YP_004546286.1	KEGG: dre:799520 hypothetical protein LOC799520
YP_004546287.1	KEGG: gwc:GWCH70_2840 holin-like protein
YP_004546288.1	KEGG: drm:Dred_0380 hypothetical protein
YP_004546289.1	KEGG: drm:Dred_2135 hypothetical protein
YP_004546290.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004546291.1	KEGG: tva:TVAG_475000 hypothetical protein
YP_004546292.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein
YP_004546293.1	KEGG: pth:PTH_1470 hypothetical protein
YP_004546294.1	KEGG: drm:Dred_1283 hypothetical protein
YP_004546295.1	KEGG: drm:Dred_1282 radical SAM domain-containing protein
YP_004546296.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase
YP_004546297.1	PFAM: helix-turn-helix HxlR type; KEGG: cbi:CLJ_B1630 putative transcriptional regulator
YP_004546298.1	KEGG: drm:Dred_1281 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type
YP_004546299.1	TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: drm:Dred_1279 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type
YP_004546300.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_1278 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_004546302.1	KEGG: pth:PTH_2121 hypothetical protein
YP_004546303.1	KEGG: drm:Dred_1276 hypothetical protein
YP_004546304.1	PFAM: protein of unknown function DUF503; KEGG: drm:Dred_1275 hypothetical protein
YP_004546305.1	PFAM: peptidase M48 Ste24p; KEGG: drm:Dred_1274 peptidase M48, Ste24p
YP_004546306.1	PFAM: thioesterase superfamily protein; KEGG: pth:PTH_1022 hypothetical protein
YP_004546307.1	PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1272 major facilitator transporter
YP_004546308.1	KEGG: tjr:TherJR_2100 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein
YP_004546309.1	KEGG: drm:Dred_1271 Dak phosphatase; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase
YP_004546310.1	PFAM: Redoxin domain protein; KEGG: apv:Apar_0089 redoxin domain protein
YP_004546311.1	PFAM: Protein of unknown function DUF2089; KEGG: dae:Dtox_2520 hypothetical protein
YP_004546312.1	KEGG: dae:Dtox_2519 hypothetical protein
YP_004546313.1	KEGG: dae:Dtox_2518 hypothetical protein
YP_004546314.1	PFAM: membrane protein of unknown function; KEGG: dae:Dtox_2517 membrane protein of unknown function
YP_004546315.1	KEGG: ssa:SSA_0405 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004546316.1	KEGG: dae:Dtox_2917 hypothetical protein
YP_004546317.1	KEGG: dae:Dtox_2916 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein
YP_004546319.1	PFAM: S-layer domain-containing protein; KEGG: pth:PTH_0765 signaling protein
YP_004546320.1	KEGG: pth:PTH_0040 hypothetical protein
YP_004546321.1	KEGG: dae:Dtox_3414 dehydrogenase (flavoprotein)-like protein
YP_004546322.1	KEGG: dau:Daud_0456 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase
YP_004546323.1	KEGG: drm:Dred_1259 GTP-binding protein, HSR1-related; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related
YP_004546324.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1258 ErfK/YbiS/YcfS/YnhG family protein
YP_004546325.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: drm:Dred_1257 FMN-dependent alpha-hydroxy acid dehydrogenase
YP_004546326.1	KEGG: drm:Dred_1256 signal-transduction protein; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein
YP_004546327.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: drm:Dred_1255 flavin reductase domain-containing protein
YP_004546328.1	PFAM: Methyltransferase type 11; KEGG: drm:Dred_1254 methyltransferase type 11
YP_004546329.1	KEGG: dae:Dtox_0008 hypothetical protein
YP_004546330.1	TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: drm:Dred_1253 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain
YP_004546331.1	TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: drm:Dred_1252 L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein
YP_004546332.1	KEGG: drm:Dred_1251 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004546333.1	KEGG: drm:Dred_1249 hypothetical protein
YP_004546334.1	KEGG: drm:Dred_1248 hypothetical protein
YP_004546335.1	KEGG: drm:Dred_1247 hypothetical protein
YP_004546336.1	KEGG: drm:Dred_1246 hypothetical protein
YP_004546337.1	PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1245 FAD dependent oxidoreductase
YP_004546338.1	KEGG: drm:Dred_1243 hypothetical protein
YP_004546339.1	KEGG: tjr:TherJR_2408 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_004546340.1	KEGG: pth:PTH_1661 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain
YP_004546341.1	KEGG: tjr:TherJR_2410 indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_004546342.1	PFAM: cobalt transport protein; KEGG: pth:PTH_1659 ABC-type cobalt transport system, permease component CbiQ and related transporters
YP_004546343.1	KEGG: pth:PTH_1658 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546344.1	KEGG: pth:PTH_1657 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546345.1	KEGG: pth:PTH_1656 hypothetical protein
YP_004546346.1	KEGG: drm:Dred_1242 SirA family protein; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA-like domain-containing protein
YP_004546347.1	manually curated; TIGRFAM: selenide, water dikinase; KEGG: drm:Dred_1241 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_004546348.1	TIGRFAM: glutamate racemase; KEGG: drm:Dred_1240 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004546349.1	KEGG: ckr:CKR_2656 hypothetical protein
YP_004546350.1	KEGG: ckr:CKR_2655 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004546351.1	KEGG: ckr:CKR_2654 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004546353.1	KEGG: drm:Dred_1551 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0150
YP_004546354.1	PFAM: Manganese/iron superoxide dismutase-like; KEGG: drm:Dred_1239 superoxide dismutase
YP_004546356.1	KEGG: drm:Dred_1238 hypothetical protein
YP_004546357.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY4398 hypothetical protein
YP_004546358.1	PFAM: PilT protein domain protein; KEGG: dau:Daud_2130 PilT domain-containing protein
YP_004546359.1	TIGRFAM: prevent-host-death family protein; KEGG: dau:Daud_2131 prevent-host-death family protein
YP_004546360.1	KEGG: drm:Dred_1237 hypothetical protein
YP_004546361.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: cbi:CLJ_0087 filamentation induced by cAMP protein Fic
YP_004546362.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_0863 phage integrase domain/SAM domain-containing protein
YP_004546363.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_2788 hypothetical protein
YP_004546364.1	KEGG: dae:Dtox_2795 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004546365.1	KEGG: drm:Dred_1497 hypothetical protein
YP_004546366.1	KEGG: cak:Caul_1611 hypothetical protein
YP_004546367.1	KEGG: dae:Dtox_0384 hypothetical protein
YP_004546368.1	KEGG: dae:Dtox_0385 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004546369.1	KEGG: dae:Dtox_0386 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B
YP_004546370.1	KEGG: dae:Dtox_0387 hypothetical protein
YP_004546371.1	KEGG: dae:Dtox_0388 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver
YP_004546372.1	KEGG: pmc:P9515_06421 type II alternative sigma-70 family RNA polymerase sigma factor
YP_004546373.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: dae:Dtox_3977 protein of unknown function DUF6 transmembrane
YP_004546374.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: drm:Dred_1815 Orn/Lys/Arg decarboxylase, major region
YP_004546375.1	PFAM: VanW family protein; KEGG: dae:Dtox_3975 VanW family protein
YP_004546376.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_2744 hypothetical protein
YP_004546377.1	KEGG: dae:Dtox_2733 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004546378.1	KEGG: pjd:Pjdr2_2052 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004546379.1	KEGG: drm:Dred_1516 hypothetical protein
YP_004546380.1	KEGG: drm:Dred_1515 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004546381.1	KEGG: drm:Dred_1514 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546382.1	KEGG: hmo:HM1_1252 hypothetical protein
YP_004546383.1	PFAM: amino acid permease-associated region; KEGG: clj:CLJU_c16020 putative aminoacid permease
YP_004546384.1	KEGG: drm:Dred_2866 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein
YP_004546385.1	KEGG: cce:Ccel_2534 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_004546386.1	KEGG: drm:Dred_3250 transcriptional regulator, TrmB
YP_004546387.1	KEGG: dhd:Dhaf_0985 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004546388.1	KEGG: bpf:BpOF4_03320 hypothetical protein; TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204
YP_004546389.1	KEGG: cnb:CNBM1940 hypothetical protein
YP_004546390.1	KEGG: drm:Dred_2587 hypothetical protein
YP_004546391.1	KEGG: swd:Swoo_4297 hypothetical protein
YP_004546392.1	manually curated; KEGG: nhl:Nhal_1453 hypothetical protein
YP_004546393.1	KEGG: bmd:BMD_3390 hypothetical protein
YP_004546394.1	KEGG: cbe:Cbei_3861 TetR family transcriptional regulator; manually curated; PFAM: regulatory protein TetR
YP_004546395.1	KEGG: drm:Dred_1180 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_004546396.1	KEGG: cts:Ctha_1162 Ppx/GppA phosphatase
YP_004546397.1	PFAM: thymidylate kinase; KEGG: gur:Gura_2642 thymidylate kinase
YP_004546398.1	KEGG: gur:Gura_2566 dTMP kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase
YP_004546399.1	PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_1179 Ppx/GppA phosphatase
YP_004546400.1	PFAM: VanW family protein; G5 domain protein; KEGG: drm:Dred_1178 VanW family protein
YP_004546401.1	KEGG: drm:Dred_1557 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004546402.1	KEGG: drm:Dred_1176 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004546403.1	KEGG: drm:Dred_1175 hypothetical protein
YP_004546404.1	KEGG: oaa:100086485 hypothetical protein LOC100086485
YP_004546405.1	KEGG: cdu:CD36_50770 NEDD8-activating enzyme E1 regulatory subunit, putative
YP_004546406.1	PFAM: protein of unknown function UCP012535; KEGG: drm:Dred_1174 hypothetical protein
YP_004546407.1	PFAM: Ion transport 2 domain protein; KEGG: drm:Dred_1173 ion transport 2 domain-containing protein
YP_004546408.1	KEGG: drm:Dred_1172 FmdB family regulatory protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB
YP_004546409.1	KEGG: swo:Swol_1697 copper ion-binding
YP_004546410.1	KEGG: drm:Dred_1171 hypothetical protein
YP_004546411.1	KEGG: drm:Dred_1850 hypothetical protein
YP_004546412.1	TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: drm:Dred_1170 glutamate 5-kinase; SMART: PUA domain containing protein
YP_004546413.1	KEGG: drm:Dred_1169 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase
YP_004546414.1	TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: drm:Dred_1168 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_004546415.1	PFAM: UspA domain-containing protein; KEGG: vdi:Vdis_2198 UspA domain-containing protein
YP_004546416.1	PFAM: UspA domain-containing protein; KEGG: amt:Amet_1447 UspA domain-containing protein
YP_004546417.1	PFAM: Penicillinase repressor; KEGG: dsy:DSY1014 hypothetical protein
YP_004546418.1	PFAM: peptidase M56 BlaR1; KEGG: cth:Cthe_3127 peptidase M56, BlaR1
YP_004546419.1	KEGG: dhd:Dhaf_2461 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004546420.1	PFAM: major facilitator superfamily MFS_1; KEGG: clj:CLJU_c14140 putative permease
YP_004546421.1	KEGG: dhd:Dhaf_3297 putative ABC transporter
YP_004546422.1	KEGG: dhd:Dhaf_3296 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546423.1	PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_3295 transcriptional regulator, TetR family
YP_004546424.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dsy:DSY2123 phosphoenolpyruvate synthase
YP_004546425.1	PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_3293 transcriptional regulator, TetR family
YP_004546426.1	KEGG: drm:Dred_1167 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_004546427.1	KEGG: drm:Dred_1166 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_004546428.1	KEGG: drm:Dred_1165 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein
YP_004546429.1	PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_1164 hypothetical protein
YP_004546430.1	KEGG: drm:Dred_1163 stage IV sporulation protein A; TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A
YP_004546431.1	KEGG: fgr:FG07651.1 hypothetical protein
YP_004546432.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: drm:Dred_1162 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
YP_004546433.1	PFAM: protein of unknown function DUF205; KEGG: drm:Dred_1161 hypothetical protein
YP_004546434.1	KEGG: drm:Dred_1160 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related
YP_004546435.1	PFAM: protein of unknown function DUF512; KEGG: drm:Dred_1159 hypothetical protein
YP_004546436.1	KEGG: drm:Dred_1158 hypothetical protein
YP_004546437.1	KEGG: drm:Dred_1157 hypothetical protein
YP_004546438.1	KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein
YP_004546439.1	PFAM: protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator
YP_004546440.1	PFAM: Uncharacterised protein family UPF0324; KEGG: dhd:Dhaf_4671 hypothetical protein
YP_004546441.1	KEGG: dhd:Dhaf_4669 hypothetical protein
YP_004546442.1	PFAM: RNA binding S1 domain protein; KEGG: drm:Dred_1154 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein
YP_004546443.1	KEGG: cbt:CLH_1650 sensory transduction histidine kinase
YP_004546444.1	KEGG: zpr:ZPR_2280 two-component system sensor histidine kinase/methyl-esterase/transferase hybrid
YP_004546445.1	KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein
YP_004546446.1	KEGG: ptm:GSPATT00021540001 hypothetical protein
YP_004546447.1	KEGG: chl:Chy400_3530 bacillolysin
YP_004546448.1	KEGG: brm:Bmur_1934 hypothetical protein
YP_004546449.1	KEGG: drm:Dred_1154 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein
YP_004546450.1	TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: drm:Dred_1153 1-acyl-sn-glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase
YP_004546451.1	KEGG: drm:Dred_1152 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase
YP_004546452.1	KEGG: drm:Dred_1151 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_004546453.1	PFAM: Prephenate dehydrogenase; KEGG: drm:Dred_1150 prephenate dehydrogenase
YP_004546454.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: pth:PTH_1622 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA
YP_004546455.1	PFAM: aminotransferase class I and II; KEGG: drm:Dred_1148 aspartate aminotransferase
YP_004546456.1	KEGG: bay:RBAM_011820 hypothetical protein
YP_004546457.1	KEGG: bmd:BMD_1324 hypothetical protein
YP_004546458.1	KEGG: drm:Dred_1146 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class
YP_004546459.1	PFAM: HutP family protein; KEGG: drm:Dred_1145 hypothetical protein
YP_004546460.1	KEGG: swo:Swol_1397 hypothetical protein
YP_004546461.1	KEGG: drm:Dred_1144 hypothetical protein
YP_004546462.1	KEGG: drm:Dred_1143 hypothetical protein
YP_004546463.1	KEGG: drm:Dred_1142 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_004546464.1	PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_1141 nucleoside recognition domain-containing protein
YP_004546465.1	PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_1140 nucleoside recognition domain-containing protein
YP_004546466.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: drm:Dred_1139 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_004546467.1	manually curated; TIGRFAM: sporulation protein YtfJ; KEGG: drm:Dred_1138 hypothetical protein; PFAM: Sporulation protein YtfJ
YP_004546468.1	KEGG: drm:Dred_1137 hypothetical protein
YP_004546469.1	PFAM: Spore germination protein-like Gmad2, bacteria; KEGG: drm:Dred_1136 hypothetical protein
YP_004546470.1	KEGG: drm:Dred_1135 putative transcriptional regulator; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB
YP_004546471.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: drm:Dred_1134 chromosome segregation and condensation protein ScpA
YP_004546472.1	TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: drm:Dred_1133 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_004546473.1	PFAM: peptidase M50; KEGG: drm:Dred_1132 peptidase M50
YP_004546474.1	KEGG: drm:Dred_1131 polynucleotide adenylyltransferase region; PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; Polynucleotide adenylyltransferase region; SMART: CBS domain containing protein
YP_004546475.1	KEGG: drm:Dred_1130 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_004546476.1	PFAM: small acid-soluble spore P family protein; KEGG: hmo:HM1_0390 hypothetical protein
YP_004546477.1	KEGG: drm:Dred_1125 hypothetical protein
YP_004546478.1	KEGG: drm:Dred_1124 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold
YP_004546479.1	KEGG: clj:CLJU_c19190 hypothetical protein
YP_004546480.1	PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region
YP_004546481.1	KEGG: drm:Dred_1123 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type
YP_004546482.1	KEGG: drm:Dred_1122 hypothetical protein
YP_004546483.1	PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: drm:Dred_1121 hypothetical protein
YP_004546484.1	KEGG: drm:Dred_1120 hypothetical protein
YP_004546486.1	PFAM: protein of unknown function DUF1657; KEGG: mta:Moth_1787 hypothetical protein
YP_004546487.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tpd:Teth39_0218 alcohol dehydrogenase
YP_004546488.1	KEGG: sth:STH3096 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver
YP_004546489.1	KEGG: tro:trd_A0570 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein
YP_004546490.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2276 iron-containing alcohol dehydrogenase
YP_004546491.1	KEGG: drm:Dred_0322 Fis family transcriptional regulator
YP_004546492.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: bbe:BBR47_12660 hypothetical protein
YP_004546493.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: pth:PTH_1913 hypothetical protein
YP_004546494.1	KEGG: pth:PTH_1914 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48
YP_004546495.1	TIGRFAM: CRISPR-associated protein Cas4; KEGG: pth:PTH_1915 endonuclease
YP_004546496.1	TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: drm:Dred_0539 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase ; helicase domain protein
YP_004546497.1	TIGRFAM: CRISPR-associated protein Cas5; KEGG: drm:Dred_0538 CRISPR-associated Cas5 family Hmari subtype protein
YP_004546498.1	KEGG: drm:Dred_0537 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801
YP_004546499.1	PFAM: CRISPR-associated protein TM1802; KEGG: drm:Dred_0536 hypothetical protein
YP_004546500.1	KEGG: tjr:TherJR_2497 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57
YP_004546501.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: drm:Dred_1855 molybdopterin oxidoreductase
YP_004546502.1	PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: pth:PTH_2646 formate dehydrogenase
YP_004546503.1	KEGG: hmo:HM1_1744 proton-translocating NADH-ubiquinone oxidoreductase, chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004546504.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tjr:TherJR_0740 NADH-quinone oxidoreductase, E subunit
YP_004546505.1	KEGG: drm:Dred_1118 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase
YP_004546506.1	PFAM: formate dehydrogenase accessory protein; KEGG: drm:Dred_1117 hypothetical protein
YP_004546507.1	PFAM: Polysulphide reductase NrfD; KEGG: drm:Dred_1116 polysulphide reductase, NrfD
YP_004546508.1	KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004546509.1	KEGG: drm:Dred_1114 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_004546510.1	PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: drm:Dred_1113 formate dehydrogenase
YP_004546511.1	KEGG: drm:Dred_1111 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_004546512.1	PFAM: GerA spore germination protein; KEGG: drm:Dred_1110 GerA spore germination protein
YP_004546513.1	KEGG: drm:Dred_1109 stage V sporulation protein AE, C-terminal region
YP_004546514.1	KEGG: drm:Dred_1108 SpoVA protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein
YP_004546515.1	manually curated; TIGRFAM: stage V sporulation protein AD; KEGG: drm:Dred_1107 stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein
YP_004546516.1	KEGG: drm:Dred_1106 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein
YP_004546517.1	KEGG: drm:Dred_1105 FliA/WhiG family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein
YP_004546518.1	SMART: ATP-binding region ATPase domain protein; TIGRFAM: anti-sigma F factor; KEGG: drm:Dred_1104 anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein
YP_004546519.1	KEGG: drm:Dred_1103 anti-sigma-factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS
YP_004546520.1	KEGG: drm:Dred_1102 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein
YP_004546521.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein
YP_004546522.1	KEGG: dae:Dtox_2795 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004546523.1	KEGG: lbf:LBF_2798 TPR repeat-containing lipoprotein
YP_004546524.1	PFAM: major facilitator superfamily MFS_1; KEGG: dae:Dtox_3789 major facilitator superfamily MFS_1
YP_004546525.1	KEGG: fma:FMG_0380 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004546526.1	KEGG: eel:EUBELI_01889 hypothetical protein
YP_004546527.1	TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: drm:Dred_1101 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain
YP_004546528.1	TIGRFAM: phosphopentomutase; KEGG: drm:Dred_1100 phosphopentomutase; PFAM: metalloenzyme domain protein
YP_004546529.1	KEGG: drm:Dred_1099 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein
YP_004546530.1	KEGG: drm:Dred_1098 hypothetical protein
YP_004546532.1	PFAM: protein of unknown function DUF441; KEGG: drm:Dred_1097 hypothetical protein
YP_004546533.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_1096 small acid-soluble spore protein, alpha/beta type
YP_004546534.1	KEGG: drm:Dred_1095 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane
YP_004546535.1	KEGG: cbf:CLI_1113 hypothetical protein
YP_004546536.1	KEGG: drm:Dred_1094 hypothetical protein
YP_004546537.1	KEGG: dae:Dtox_2048 hypothetical protein
YP_004546538.1	KEGG: drm:Dred_1093 hypothetical protein
YP_004546539.1	KEGG: mfa:Mfla_2316 cyclic nucleotide-binding domain-containing protein
YP_004546540.1	KEGG: bpf:BpOF4_16635 hypothetical protein
YP_004546541.1	KEGG: drm:Dred_1092 peptidase T-like protein; TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004546542.1	KEGG: tjr:TherJR_1676 pyruvate/ketoisovalerate oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain
YP_004546543.1	PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: hor:Hore_06790 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit
YP_004546544.1	KEGG: adg:Adeg_1385 2-ketoisovalerate ferredoxin reductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_004546545.1	KEGG: pth:PTH_1204 ferredoxin
YP_004546546.1	KEGG: dau:Daud_1610 hypothetical protein
YP_004546547.1	KEGG: drm:Dred_1091 hypothetical protein
YP_004546548.1	PFAM: glycosyl transferase family 2; KEGG: drm:Dred_1090 glycosyl transferase family protein
YP_004546549.1	KEGG: drm:Dred_1089 hypothetical protein
YP_004546550.1	PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; KEGG: drm:Dred_1088 thiamin pyrophosphokinase, catalytic region
YP_004546551.1	KEGG: rno:450224 oligodendrocyte-myelin glycoprotein
YP_004546552.1	KEGG: tye:THEYE_A1155 NrfD
YP_004546553.1	KEGG: ant:Arnit_0953 TRAP dicarboxylate transporter subunit DctM
YP_004546554.1	KEGG: fbc:FB2170_04760 hypothetical protein
YP_004546555.1	KEGG: dae:Dtox_2743 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004546556.1	PFAM: protein of unknown function DUF1003; KEGG: aac:Aaci_2194 protein of unknown function DUF1003
YP_004546557.1	TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; KEGG: drm:Dred_1086 response regulator receiver protein; SMART: response regulator receiver
YP_004546558.1	TIGRFAM: stage IV sporulation protein B; KEGG: drm:Dred_1085 peptidase S55, SpoIVB; PFAM: peptidase S55 SpoIVB
YP_004546559.1	KEGG: drm:Dred_1084 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein
YP_004546560.1	KEGG: drm:Dred_1083 arginine repressor, ArgR; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like
YP_004546561.1	PFAM: rRNA methylase; KEGG: drm:Dred_1082 putative rRNA methylase
YP_004546562.1	PFAM: ATP-NAD/AcoX kinase; KEGG: drm:Dred_1081 NAD(+) kinase
YP_004546563.1	KEGG: drm:Dred_1080 hypothetical protein
YP_004546564.1	TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: drm:Dred_1079 hemolysin A; SMART: RNA-binding S4 domain protein
YP_004546565.1	KEGG: drm:Dred_1078 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein
YP_004546566.1	KEGG: drm:Dred_1077 hypothetical protein
YP_004546567.1	PFAM: Polyprenyl synthetase; KEGG: drm:Dred_1076 polyprenyl synthetase
YP_004546568.1	KEGG: drm:Dred_1075 exodeoxyribonuclease VII, small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit
YP_004546569.1	PFAM: Formiminotransferase-cyclodeaminase; KEGG: drm:Dred_1074 formiminotransferase-cyclodeaminase
YP_004546570.1	KEGG: drm:Dred_1073 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004546571.1	KEGG: drm:Dred_1072 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type
YP_004546572.1	manually curated; TIGRFAM: glutamate synthase (NADPH), homotetrameric; KEGG: drm:Dred_1071 putative oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004546573.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: drm:Dred_1070 ferredoxin-NADP(+) reductase subunit alpha
YP_004546574.1	KEGG: drm:Dred_1069 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44
YP_004546575.1	PFAM: Protein of unknown function DUF2273; KEGG: drm:Dred_1068 hypothetical protein
YP_004546576.1	PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1067 hypothetical protein
YP_004546577.1	PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1066 hypothetical protein
YP_004546578.1	KEGG: drm:Dred_1065 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein
YP_004546579.1	KEGG: drm:Dred_1064 pyruvate carboxylase subunit B; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein
YP_004546580.1	KEGG: drm:Dred_1063 hypothetical protein
YP_004546581.1	KEGG: drm:Dred_1062 hypothetical protein
YP_004546582.1	PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein
YP_004546583.1	KEGG: drm:Dred_1060 hypothetical protein; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE
YP_004546584.1	TIGRFAM: stage III sporulation protein AD; KEGG: drm:Dred_1059 putative sporulation protein
YP_004546585.1	TIGRFAM: stage III sporulation protein AC; KEGG: drm:Dred_1058 stage III sporulation AC family protein
YP_004546586.1	KEGG: drm:Dred_1057 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB
YP_004546587.1	KEGG: drm:Dred_1056 hypothetical protein; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase
YP_004546588.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1055 copper amine oxidase domain-containing protein
YP_004546589.1	KEGG: drm:Dred_1054 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein
YP_004546590.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: dae:Dtox_0904 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004546591.1	KEGG: drm:Dred_1053 hypothetical protein
YP_004546592.1	KEGG: drm:Dred_1052 translation elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein
YP_004546593.1	PFAM: peptidase M24; creatinase; KEGG: drm:Dred_1051 peptidase M24
YP_004546594.1	TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: drm:Dred_1050 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II
YP_004546595.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: drm:Dred_1049 peptidase U62, modulator of DNA gyrase
YP_004546596.1	KEGG: drm:Dred_1048 hypothetical protein
YP_004546597.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: drm:Dred_1032 peptidase U62, modulator of DNA gyrase
YP_004546598.1	KEGG: cdl:CDR20291_3346 putative type IV pilus assembly protein
YP_004546599.1	PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein
YP_004546600.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: dau:Daud_0998 type IV pilus assembly protein PilM
YP_004546601.1	KEGG: dau:Daud_0994 N-terminal methylation protein
YP_004546602.1	KEGG: mta:Moth_1546 hypothetical protein
YP_004546603.1	KEGG: toc:Toce_1924 hypothetical protein
YP_004546604.1	KEGG: toc:Toce_1925 hypothetical protein
YP_004546605.1	KEGG: toc:Toce_1927 N-terminal methylation
YP_004546606.1	KEGG: toc:Toce_1927 N-terminal methylation
YP_004546607.1	PFAM: Type II secretion system F domain; KEGG: dau:Daud_0970 type II secretion system protein
YP_004546608.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: adg:Adeg_1724 twitching motility protein; SMART: AAA ATPase
YP_004546609.1	KEGG: dau:Daud_0991 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase
YP_004546610.1	KEGG: ttm:Tthe_1281 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV
YP_004546611.1	TIGRFAM: 3-dehydroquinate synthase; KEGG: drm:Dred_1021 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase
YP_004546612.1	KEGG: drm:Dred_1020 shikimate kinase; PFAM: shikimate kinase
YP_004546613.1	TIGRFAM: chorismate synthase; KEGG: drm:Dred_1019 chorismate synthase; PFAM: chorismate synthase
YP_004546614.1	KEGG: drm:Dred_1018 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase
YP_004546615.1	TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: drm:Dred_1017 HAD family phosphatase
YP_004546616.1	KEGG: dae:Dtox_2798 RNA polymerase, sigma 28 subunit, SigK; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein
YP_004546617.1	KEGG: pth:PTH_0798 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004546618.1	KEGG: cpf:CPF_1811 GGDEF/HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004546619.1	TIGRFAM: diguanylate cyclase; PFAM: CBS domain containing protein; GGDEF domain containing protein; KEGG: drm:Dred_1016 diguanylate cyclase; SMART: GGDEF domain containing protein; CBS domain containing protein
YP_004546620.1	KEGG: drm:Dred_1015 hypothetical protein
YP_004546621.1	KEGG: dak:DaAHT2_0654 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004546622.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; KEGG: dae:Dtox_0050 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; GAF domain protein; histidine kinase A domain protein
YP_004546623.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_35310 GGDEF domain protein; SMART: GGDEF domain containing protein
YP_004546624.1	KEGG: toc:Toce_1956 transposase IS3/IS911 family protein
YP_004546625.1	PFAM: Integrase catalytic region; KEGG: toc:Toce_2036 integrase catalytic region
YP_004546626.1	KEGG: rru:Rru_A1367 hexulose-6-phosphate isomerase; PFAM: sugar isomerase (SIS)
YP_004546627.1	PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: msv:Mesil_3059 xylose isomerase domain protein TIM barrel
YP_004546628.1	PFAM: PfkB domain protein; KEGG: ppp:PHYPADRAFT_121587 hypothetical protein
YP_004546629.1	KEGG: dtu:Dtur_0920 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like
YP_004546630.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bts:Btus_0337 alcohol dehydrogenase GroES domain protein
YP_004546631.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bss:BSUW23_03100 glucitol (sorbitol) dehydrogenase
YP_004546632.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2612 binding-protein-dependent transport systems inner membrane component
YP_004546633.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2611 binding-protein-dependent transport systems inner membrane component
YP_004546634.1	PFAM: extracellular solute-binding protein family 1; KEGG: csa:Csal_2610 extracellular solute-binding protein
YP_004546636.1	KEGG: ate:Athe_1803 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase
YP_004546637.1	PFAM: PfkB domain protein; KEGG: toc:Toce_1876 PfkB domain protein
YP_004546638.1	KEGG: mta:Moth_0011 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR
YP_004546639.1	TIGRFAM: ketose-bisphosphate aldolase; KEGG: pam:PANA_2380 FbaA; PFAM: ketose-bisphosphate aldolase class-II
YP_004546640.1	KEGG: app:CAP2UW1_1735 beta-lactamase domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_004546641.1	KEGG: drm:Dred_0906 hypothetical protein
YP_004546642.1	KEGG: drm:Dred_0905 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase
YP_004546643.1	KEGG: drm:Dred_0904 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein
YP_004546644.1	KEGG: drm:Dred_0903 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004546645.1	KEGG: drm:Dred_0902 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_004546646.1	PFAM: peptidase U32; KEGG: drm:Dred_0901 peptidase U32
YP_004546647.1	PFAM: aminodeoxychorismate lyase; KEGG: drm:Dred_0900 aminodeoxychorismate lyase
YP_004546648.1	KEGG: drm:Dred_0899 hypothetical protein
YP_004546649.1	KEGG: dhd:Dhaf_2806 hypothetical protein
YP_004546650.1	KEGG: bbe:BBR47_46000 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004546651.1	PFAM: VanW family protein; KEGG: drm:Dred_0777 VanW family protein
YP_004546652.1	PFAM: protein of unknown function DUF1292; KEGG: drm:Dred_0776 hypothetical protein
YP_004546653.1	KEGG: drm:Dred_0775 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold
YP_004546654.1	PFAM: protein of unknown function DUF965; KEGG: drm:Dred_0773 hypothetical protein
YP_004546655.1	PFAM: protein of unknown function DUF421; KEGG: cce:Ccel_1122 protein of unknown function DUF421
YP_004546656.1	KEGG: ctc:CTC00416 hypothetical protein
YP_004546657.1	KEGG: drm:Dred_0772 hypothetical protein
YP_004546658.1	KEGG: drm:Dred_0769 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1
YP_004546659.1	PFAM: protein of unknown function UPF0118; KEGG: drm:Dred_0768 hypothetical protein
YP_004546660.1	KEGG: dae:Dtox_2269 hypothetical protein
YP_004546661.1	KEGG: drm:Dred_0767 hypothetical protein
YP_004546662.1	KEGG: drm:Dred_2741 phospholipase C zinc-binding protein; PFAM: phospholipase C zinc-binding protein; SMART: phospholipase C zinc-binding protein
YP_004546663.1	PFAM: glycosyl transferase group 1; KEGG: hor:Hore_11160 glycosyl transferase group 1
YP_004546664.1	KEGG: tet:TTHERM_01035720 hypothetical protein
YP_004546665.1	KEGG: dae:Dtox_1950 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein
YP_004546666.1	TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: drm:Dred_0766 tRNA-specific 2-thiouridylase MnmA
YP_004546667.1	KEGG: drm:Dred_0765 NifU domain-containing protein; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein
YP_004546668.1	KEGG: drm:Dred_0764 aminotransferase, class V; TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V
YP_004546669.1	KEGG: drm:Dred_0763 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_004546670.1	KEGG: drm:Dred_0762 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein
YP_004546671.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: drm:Dred_0761 UBA/ThiF-type NAD/FAD binding protein
YP_004546672.1	KEGG: drm:Dred_0760 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004546673.1	KEGG: drm:Dred_0759 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004546674.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_0758 peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein
YP_004546675.1	KEGG: drm:Dred_0757 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein
YP_004546676.1	TIGRFAM: histidyl-tRNA synthetase; KEGG: drm:Dred_0756 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_004546677.1	PFAM: protein of unknown function DUF896; KEGG: drm:Dred_0755 hypothetical protein
YP_004546678.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: drm:Dred_0754 hydrolase
YP_004546679.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: slp:Slip_0633 substrate-binding region of ABC-type glycine betaine transport system
YP_004546680.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1686 binding-protein dependent transport system inner membrane protein
YP_004546681.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1687 binding-protein dependent transport system inner membrane protein
YP_004546682.1	TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: mta:Moth_1688 glycine betaine/L-proline transport ATP binding subunit; SMART: AAA ATPase; CBS domain containing protein
YP_004546683.1	PFAM: Methyltransferase type 11; KEGG: cbe:Cbei_3246 methyltransferase type 11
YP_004546684.1	KEGG: bbe:BBR47_46000 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004546685.1	KEGG: clj:CLJU_c15710 hypothetical protein
YP_004546686.1	KEGG: chy:CHY_2130 hypothetical protein
YP_004546687.1	KEGG: cel:B0212.5 OSMotic avoidance abnormal family member (osm-9)
YP_004546688.1	KEGG: tte:TTE2362 hypothetical protein
YP_004546689.1	KEGG: cbe:Cbei_5022 hypothetical protein
YP_004546690.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: amt:Amet_2132 transposase IS116/IS110/IS902 family protein
YP_004546691.1	KEGG: dra:DR_0987 DNA-binding response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_004546692.1	KEGG: deg:DehalGT_0593 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein
YP_004546693.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: toc:Toce_0243 FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_004546694.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: nth:Nther_1247 NADH dehydrogenase (ubiquinone) 24 kDa subunit
YP_004546695.1	KEGG: tsi:TSIB_1860 transcription regulator, Lrp/AsnC family
YP_004546696.1	KEGG: drm:Dred_1356 ABC transporter related
YP_004546697.1	KEGG: zro:ZYRO0C00220g hypothetical protein
YP_004546698.1	KEGG: dhd:Dhaf_1254 hypothetical protein
YP_004546699.1	KEGG: pyo:PY05559 hypothetical protein
YP_004546700.1	KEGG: clj:CLJU_c26280 putative ABC transporter permease
YP_004546701.1	PFAM: Protein of unknown function DUF2599; KEGG: bcq:BCQ_1310 hypothetical protein
YP_004546702.1	KEGG: bwe:BcerKBAB4_5533 thioredoxin domain-containing protein
YP_004546703.1	PFAM: LytTr DNA-binding region; KEGG: dsy:DSY2527 hypothetical protein
YP_004546704.1	KEGG: dsy:DSY4187 hypothetical protein
YP_004546705.1	SMART: Rhodanese domain protein; KEGG: aco:Amico_0283 rhodanese domain protein
YP_004546706.1	KEGG: cdl:CDR20291_1075 hypothetical protein
YP_004546707.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004546708.1	KEGG: ttm:Tthe_0100 hypothetical protein
YP_004546709.1	KEGG: aca:ACP_1571 ISAca4, transposase orfA; manually curated; PFAM: transposase IS3/IS911 family protein
YP_004546710.1	KEGG: lch:Lcho_1754 large exoprotein involved in heme utilization or adhesion
YP_004546711.1	KEGG: rno:308971 trinucleotide repeat containing 6a
YP_004546712.1	KEGG: dae:Dtox_3200 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver
YP_004546713.1	KEGG: mta:Moth_1614 hypothetical protein
YP_004546714.1	KEGG: dae:Dtox_3199 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B
YP_004546715.1	KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004546716.1	PFAM: protein of unknown function DUF161; KEGG: ddr:Deide_05570 hypothetical protein
YP_004546717.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dsy:DSY3773 hypothetical protein
YP_004546718.1	PFAM: protein of unknown function DUF401; KEGG: glo:Glov_0511 protein of unknown function DUF401
YP_004546719.1	PFAM: protein of unknown function UPF0016; KEGG: sat:SYN_01349 hypothetical protein
YP_004546720.1	KEGG: afw:Anae109_3495 hypothetical protein
YP_004546721.1	PFAM: amino acid permease-associated region; KEGG: cbe:Cbei_4028 amino acid permease-associated region
YP_004546722.1	PFAM: copper amine oxidase-like domain-containing protein; glycoside hydrolase family 18; KEGG: slp:Slip_1146 copper amine oxidase domain protein
YP_004546723.1	KEGG: pti:PHATRDRAFT_47702 hypothetical protein
YP_004546724.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dae:Dtox_2281 binding-protein-dependent transport systems inner membrane component
YP_004546725.1	KEGG: mta:Moth_0098 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546726.1	SMART: extracellular solute-binding protein family 3; KEGG: adg:Adeg_0354 NMT1/THI5 like domain protein
YP_004546727.1	KEGG: chy:CHY_0102 ferritin; PFAM: Ferritin Dps family protein
YP_004546728.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dae:Dtox_1563 rubredoxin-type Fe(Cys)4 protein
YP_004546729.1	manually curated; PFAM: ABC transporter related; KEGG: bay:RBAM_031050 opuBA; SMART: AAA ATPase
YP_004546730.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: str:Sterm_3032 substrate-binding region of ABC-type glycine betaine transport system
YP_004546731.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0275 glycine betaine/L-proline ABC transporter (permease), putative
YP_004546732.1	PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: hmo:HM1_0674 nad dependent epimerase/dehydratase family protein
YP_004546733.1	PFAM: protein of unknown function DUF86; KEGG: pmo:Pmob_1311 hypothetical protein
YP_004546734.1	PFAM: DNA polymerase beta domain protein region; KEGG: pth:PTH_0358 nucleotidyltransferase
YP_004546735.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: drm:Dred_1577 protein of unknown function DUF610, YibQ
YP_004546736.1	KEGG: drm:Dred_1578 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_004546737.1	PFAM: ABC transporter related; KEGG: dae:Dtox_2874 ABC transporter related
YP_004546738.1	KEGG: ckr:CKR_2503 hypothetical protein
YP_004546739.1	KEGG: drm:Dred_1506 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004546740.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_1505 hypothetical protein
YP_004546741.1	KEGG: tmt:Tmath_0438 cobalamin biosynthesis protein CbiM; TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein
YP_004546742.1	KEGG: lsp:Bsph_3450 cobalt ABC transporter permease; TIGRFAM: cobalt transport protein; PFAM: Cobalt transport protein CbiN
YP_004546743.1	KEGG: tmt:Tmath_0440 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein
YP_004546744.1	TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: cno:NT01CX_1332 cobalt ABC transporter, ATP-binding protein; SMART: AAA ATPase
YP_004546745.1	PFAM: protein of unknown function DUF34; KEGG: cdf:CD0672 hypothetical protein
YP_004546746.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1644 copper amine oxidase domain-containing protein
YP_004546747.1	KEGG: toc:Toce_0259 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein
YP_004546748.1	KEGG: hmo:HM1_1035 6-O-methylguanine DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_004546749.1	KEGG: bcu:BCAH820_3221 transcriptional regulator, AraC family; PFAM: Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004546750.1	KEGG: pap:PSPA7_4174 hypothetical protein; PFAM: NADPH-dependent FMN reductase
YP_004546751.1	TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: hmo:HM1_1062 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related
YP_004546752.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dae:Dtox_0791 NADH/ubiquinone/plastoquinone (complex I)
YP_004546753.1	KEGG: dae:Dtox_0792 respiratory-chain NADH dehydrogenase, subunit 1
YP_004546754.1	KEGG: dae:Dtox_0793 hypothetical protein
YP_004546755.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dae:Dtox_0794 NADH/ubiquinone/plastoquinone (complex I)
YP_004546756.1	PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dae:Dtox_0795 NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_004546757.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dae:Dtox_0796 NADH ubiquinone oxidoreductase 20 kDa subunit
YP_004546758.1	KEGG: amt:Amet_3205 lipoyltransferase and lipoate-protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: Lipoate protein ligase-like; biotin/lipoate A/B protein ligase
YP_004546759.1	KEGG: mcd:MCRO_0555 probable 5'-3' exodeoxyribonuclease
YP_004546760.1	KEGG: drm:Dred_0735 beta-lactamase domain-containing protein
YP_004546761.1	KEGG: drm:Dred_0734 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004546762.1	SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: drm:Dred_0733 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein
YP_004546763.1	KEGG: drm:Dred_0732 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004546764.1	KEGG: drm:Dred_0731 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1
YP_004546765.1	KEGG: drm:Dred_0730 hypothetical protein
YP_004546766.1	KEGG: drm:Dred_0729 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004546767.1	KEGG: drm:Dred_0728 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004546768.1	KEGG: drm:Dred_0727 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor
YP_004546769.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_0726 hypothetical protein
YP_004546770.1	KEGG: drm:Dred_0725 hypothetical protein
YP_004546771.1	KEGG: drm:Dred_0724 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein
YP_004546772.1	PFAM: Glycine cleavage system P-protein-like; KEGG: drm:Dred_0723 glycine dehydrogenase subunit 2
YP_004546773.1	KEGG: drm:Dred_0722 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein-like
YP_004546774.1	KEGG: drm:Dred_0721 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein
YP_004546775.1	KEGG: drm:Dred_0720 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel
YP_004546776.1	KEGG: drm:Dred_0719 hypothetical protein
YP_004546777.1	KEGG: drm:Dred_0718 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase
YP_004546778.1	KEGG: dae:Dtox_2167 beta-lactamase domain protein
YP_004546779.1	SMART: Rhodanese domain protein; KEGG: lrl:LC705_02121 rhodanese-related sulfurtransferases
YP_004546780.1	KEGG: smc:SmuNN2025_0188 putative transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004546781.1	KEGG: mba:Mbar_A1826 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein
YP_004546782.1	KEGG: dae:Dtox_1824 hypothetical protein
YP_004546783.1	KEGG: mac:MA3472 hypothetical protein
YP_004546784.1	KEGG: dae:Dtox_2730 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004546785.1	KEGG: dae:Dtox_2729 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004546786.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi02771 hypothetical protein
YP_004546787.1	PFAM: VanW family protein; KEGG: dhd:Dhaf_1773 VanW family protein
YP_004546788.1	manually curated; KEGG: cpc:Cpar_1201 hypothetical protein
YP_004546789.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dae:Dtox_2649 pyruvate phosphate dikinase PEP/pyruvate-binding
YP_004546790.1	PFAM: regulatory protein TetR; KEGG: dae:Dtox_2650 transcriptional regulator, TetR family
YP_004546791.1	KEGG: gym:GYMC10_4413 alpha/beta hydrolase fold protein
YP_004546792.1	PFAM: Tetracycline transcriptional regulator QacR-related domain-containing protein; regulatory protein TetR; KEGG: bbe:BBR47_21860 probable transcriptional regulator
YP_004546793.1	PFAM: Methyltransferase type 11; KEGG: nmg:Nmag_3332 methyltransferase type 11
YP_004546794.1	PFAM: protein of unknown function DUF167; KEGG: drm:Dred_0717 hypothetical protein
YP_004546795.1	KEGG: drm:Dred_0716 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein
YP_004546796.1	KEGG: drm:Dred_0715 RNA-binding S4 domain-containing protein
YP_004546797.1	PFAM: protein of unknown function YGGT; KEGG: drm:Dred_0714 protein of unknown function YGGT
YP_004546798.1	PFAM: protein of unknown function DUF552; KEGG: drm:Dred_0713 hypothetical protein
YP_004546799.1	PFAM: alanine racemase domain protein; KEGG: drm:Dred_0712 alanine racemase domain-containing protein
YP_004546800.1	KEGG: drm:Dred_0711 hypothetical protein
YP_004546801.1	KEGG: drm:Dred_0710 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein
YP_004546802.1	TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: drm:Dred_0709 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004546803.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; KEGG: drm:Dred_0708 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_004546804.1	KEGG: drm:Dred_0707 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004546805.1	PFAM: protein of unknown function DUF152; KEGG: drm:Dred_0706 hypothetical protein
YP_004546806.1	PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: drm:Dred_0705 beta-lactamase domain-containing protein
YP_004546807.1	KEGG: adg:Adeg_1544 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB
YP_004546808.1	KEGG: drm:Dred_0704 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004546809.1	PFAM: Methyltransferase type 11; KEGG: drm:Dred_0699 methyltransferase type 11
YP_004546810.1	KEGG: drm:Dred_0698 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004546811.1	TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: drm:Dred_0652 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane
YP_004546812.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: cbf:CLI_0920 putative flavoredoxin
YP_004546813.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: mpl:Mpal_0999 carboxymuconolactone decarboxylase
YP_004546814.1	KEGG: dau:Daud_0161 hypothetical protein
YP_004546815.1	PFAM: nitrite and sulphite reductase 4Fe-4S region; KEGG: drm:Dred_0697 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004546816.1	PFAM: Domain of unknown function DUF1858; KEGG: drm:Dred_0695 hypothetical protein
YP_004546817.1	KEGG: drm:Dred_0694 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein
YP_004546818.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: drm:Dred_0693 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein
YP_004546819.1	PFAM: ATP-cone domain protein; KEGG: drm:Dred_0692 transcriptional regulator NrdR
YP_004546820.1	KEGG: drm:Dred_0691 spore photoproduct lyase
YP_004546821.1	PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_0690 hypothetical protein
YP_004546822.1	PFAM: protein of unknown function DUF162; KEGG: drm:Dred_0689 hypothetical protein
YP_004546823.1	KEGG: drm:Dred_0688 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein
YP_004546824.1	KEGG: drm:Dred_0687 sporulation sigma factor SigG; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein
YP_004546825.1	KEGG: drm:Dred_0686 sporulation sigma factor SigE; TIGRFAM: RNA polymerase sigma-E factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein
YP_004546826.1	PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: drm:Dred_0685 peptidase U4, sporulation factor SpoIIGA
YP_004546827.1	KEGG: rca:Rcas_3311 hypothetical protein
YP_004546829.1	KEGG: drm:Dred_0684 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain
YP_004546830.1	PFAM: cell division protein FtsA; KEGG: drm:Dred_0683 cell division protein FtsA
YP_004546831.1	PFAM: protein of unknown function DUF1290; KEGG: drm:Dred_0682 hypothetical protein
YP_004546832.1	PFAM: protein of unknown function DUF881; KEGG: drm:Dred_0681 hypothetical protein
YP_004546833.1	PFAM: protein of unknown function DUF881; KEGG: drm:Dred_0680 hypothetical protein
YP_004546834.1	PFAM: Polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: drm:Dred_0679 cell division protein FtsQ
YP_004546835.1	KEGG: drm:Dred_0678 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_004546836.1	TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: drm:Dred_0677 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein
YP_004546837.1	KEGG: drm:Dred_0676 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004546838.1	KEGG: drm:Dred_0675 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain
YP_004546839.1	KEGG: drm:Dred_0674 stage V sporulation protein E; TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein
YP_004546840.1	KEGG: drm:Dred_0673 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004546841.1	KEGG: drm:Dred_0672 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
YP_004546842.1	KEGG: drm:Dred_0671 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004546843.1	KEGG: drm:Dred_0670 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004546844.1	SMART: PASTA domain containing protein; TIGRFAM: stage V sporulation protein D; KEGG: drm:Dred_0669 stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein
YP_004546845.1	KEGG: drm:Dred_0668 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator
YP_004546846.1	KEGG: drm:Dred_0667 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase
YP_004546847.1	KEGG: drm:Dred_0666 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain
YP_004546848.1	KEGG: drm:Dred_0665 histidinol-phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein
YP_004546849.1	PFAM: Patatin; KEGG: drm:Dred_0664 patatin
YP_004546850.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; KEGG: drm:Dred_0663 putative PAS/PAC sensor protein; SMART: AAA ATPase; PAS domain containing protein
YP_004546851.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: drm:Dred_0651 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein
YP_004546852.1	PFAM: ferric-uptake regulator; KEGG: drm:Dred_0650 ferric uptake regulator family protein
YP_004546853.1	KEGG: drm:Dred_0649 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein
YP_004546854.1	KEGG: drm:Dred_0648 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein
YP_004546855.1	PFAM: FeoA family protein; KEGG: drm:Dred_0647 FeoA family protein
YP_004546856.1	KEGG: dae:Dtox_1004 hypothetical protein
YP_004546857.1	KEGG: drm:Dred_0646 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II
YP_004546858.1	PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: drm:Dred_0645 acid phosphatase/vanadium-dependent haloperoxidase related
YP_004546859.1	PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_0644 major facilitator transporter
YP_004546860.1	PFAM: polysaccharide deacetylase; KEGG: drm:Dred_0643 polysaccharide deacetylase
YP_004546861.1	PFAM: Protein of unknown function DUF2088; KEGG: dae:Dtox_0989 hypothetical protein
YP_004546862.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_0641 peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein
YP_004546863.1	KEGG: drm:Dred_0640 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004546864.1	PFAM: methyl-viologen-reducing hydrogenase delta subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_0639 methyl-viologen-reducing hydrogenase, delta subunit
YP_004546865.1	PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_0638 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004546866.1	KEGG: drm:Dred_0637 adenylylsulfate reductase subunit alpha; TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: FAD dependent oxidoreductase
YP_004546867.1	TIGRFAM: adenylylsulfate reductase, beta subunit; KEGG: drm:Dred_0636 adenylylsulfate reductase, beta subunit
YP_004546868.1	TIGRFAM: sulfate adenylyltransferase; KEGG: drm:Dred_0635 sulfate adenylyltransferase; PFAM: ATP-sulfurylase
YP_004546869.1	KEGG: drm:Dred_0634 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein
YP_004546870.1	KEGG: drm:Dred_0633 putative heterodisulfide reductase, C subunit
YP_004546871.1	PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_0632 hypothetical protein
YP_004546872.1	KEGG: drm:Dred_0631 hypothetical protein
YP_004546873.1	KEGG: drm:Dred_0630 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004546874.1	KEGG: cma:Cmaq_0326 paREP15, putative coiled-coil protein
YP_004546875.1	PFAM: type IV pilus assembly PilZ; KEGG: drm:Dred_0629 type IV pilus assembly PilZ
YP_004546876.1	PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_0599 major facilitator transporter
YP_004546877.1	KEGG: drm:Dred_1805 hypothetical protein
YP_004546878.1	PFAM: peptidase U32; KEGG: dhd:Dhaf_0684 peptidase U32
YP_004546879.1	KEGG: dsy:DSY0724 hypothetical protein
YP_004546880.1	KEGG: hya:HY04AAS1_0081 protein of unknown function DUF558
YP_004546881.1	KEGG: mta:Moth_2293 hypothetical protein
YP_004546882.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bba:Bd2190 oligopeptide ABC transporter, ATP-binding protein; SMART: AAA ATPase
YP_004546883.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: rci:LRC380 putative ABC-type peptide transport system, ATPase component 1; SMART: AAA ATPase
YP_004546884.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6673 ATP-dependent peptide transporter membrane subunit
YP_004546885.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dba:Dbac_2921 binding-protein-dependent transport systems inner membrane component
YP_004546886.1	PFAM: extracellular solute-binding protein family 5; KEGG: bts:Btus_2779 extracellular solute-binding protein family 5
YP_004546887.1	KEGG: nth:Nther_2571 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004546888.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dae:Dtox_0338 cobalamin synthesis protein P47K
YP_004546889.1	PFAM: periplasmic solute binding protein; KEGG: drm:Dred_2645 periplasmic solute binding protein
YP_004546890.1	KEGG: lsa:LSA1851 extracellular small protein precursor
YP_004546891.1	KEGG: mta:Moth_1763 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_004546892.1	KEGG: dsy:DSY4927 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase
YP_004546893.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; Cache domain protein; histidine kinase A domain protein; KEGG: drm:Dred_1269 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein
YP_004546894.1	KEGG: dae:Dtox_4335 hypothetical protein
YP_004546896.1	KEGG: drm:Dred_0492 hypothetical protein
YP_004546897.1	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: drm:Dred_0491 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase
YP_004546898.1	KEGG: drm:Dred_0488 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase
YP_004546899.1	KEGG: drm:Dred_0486 hypothetical protein
YP_004546900.1	KEGG: drm:Dred_0485 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2
YP_004546901.1	PFAM: extracellular solute-binding protein family 5; KEGG: drm:Dred_0484 extracellular solute-binding protein
YP_004546902.1	KEGG: drm:Dred_0482 hypothetical protein
YP_004546903.1	KEGG: drm:Dred_0481 hypothetical protein
YP_004546904.1	KEGG: drm:Dred_0480 hypothetical protein
YP_004546905.1	KEGG: drm:Dred_0479 hypothetical protein
YP_004546906.1	KEGG: drm:Dred_0478 anhydrase family 3 protein
YP_004546907.1	KEGG: drm:Dred_0477 hypothetical protein
YP_004546908.1	KEGG: drm:Dred_0475 hypothetical protein
YP_004546909.1	TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2; KEGG: drm:Dred_0474 isopentenyl pyrophosphate isomerase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase
YP_004546910.1	KEGG: drm:Dred_0472 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein
YP_004546912.1	KEGG: drm:Dred_0470 hypothetical protein
YP_004546913.1	KEGG: hya:HY04AAS1_1261 hypothetical protein
YP_004546914.1	KEGG: ptm:GSPATT00013167001 hypothetical protein
YP_004546915.1	PFAM: membrane protein of unknown function; KEGG: drm:Dred_0469 membrane protein of unknown function
YP_004546916.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_0468 small acid-soluble spore protein, alpha/beta type
YP_004546917.1	PFAM: protein of unknown function DUF1232; KEGG: drm:Dred_0465 hypothetical protein
YP_004546918.1	KEGG: dae:Dtox_2079 hypothetical protein
YP_004546919.1	KEGG: drm:Dred_0464 hypothetical protein
YP_004546920.1	TIGRFAM: hydrogenase, Fe-only; KEGG: drm:Dred_0463 hydrogenases, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit
YP_004546921.1	KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004546922.1	KEGG: drm:Dred_0461 putative hydrogenase cytochrome b subunit
YP_004546923.1	PFAM: histidine kinase HAMP region domain protein; KEGG: tjr:TherJR_1822 putative sensor with HAMP domain protein
YP_004546924.1	KEGG: drm:Dred_0459 hypothetical protein
YP_004546925.1	KEGG: gct:GC56T3_0187 sulfatase
YP_004546926.1	KEGG: drm:Dred_0458 pro-sigma-E processing factor spoIIR; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R
YP_004546927.1	KEGG: drm:Dred_0456 hypothetical protein
YP_004546929.1	KEGG: dae:Dtox_3524 hypothetical protein
YP_004546930.1	KEGG: dae:Dtox_1812 hypothetical protein
YP_004546931.1	KEGG: cby:CLM_2428 CobQ/CobB/MinD/ParA family protein
YP_004546932.1	KEGG: dae:Dtox_3595 hypothetical protein
YP_004546933.1	PFAM: pyruvate carboxyltransferase; KEGG: dae:Dtox_1022 pyruvate carboxyltransferase
YP_004546934.1	PFAM: Nitrogenase iron-iron accessory protein AnfO; KEGG: drm:Dred_2813 hypothetical protein
YP_004546935.1	PFAM: Sucraseferredoxin family protein; KEGG: dae:Dtox_1031 ferredoxin, 2Fe-2S
YP_004546936.1	PFAM: Radical SAM domain protein; KEGG: drm:Dred_2814 radical SAM domain-containing protein
YP_004546937.1	PFAM: oxidoreductase/nitrogenase component 1; KEGG: drm:Dred_2815 nitrogenase
YP_004546938.1	KEGG: drm:Dred_2816 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1
YP_004546939.1	TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: drm:Dred_2817 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1
YP_004546940.1	KEGG: drm:Dred_2818 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1
YP_004546941.1	PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2819 nitrogen regulatory protein P-II
YP_004546942.1	PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2820 nitrogen regulatory protein P-II
YP_004546943.1	TIGRFAM: nitrogenase iron protein; KEGG: drm:Dred_2821 nitrogenase iron protein; PFAM: NifH/frxC-family protein
YP_004546944.1	KEGG: drm:Dred_0455 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1
YP_004546945.1	PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_0454 secretion protein HlyD
YP_004546946.1	PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_0453 secretion protein HlyD family protein
YP_004546947.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-3 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: drm:Dred_1552 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region
YP_004546948.1	PFAM: RDD domain containing protein; KEGG: drm:Dred_0451 RDD domain-containing protein
YP_004546949.1	PFAM: protein of unknown function DUF327; KEGG: drm:Dred_0450 hypothetical protein
YP_004546950.1	PFAM: carbonic anhydrase; KEGG: drm:Dred_0448 hypothetical protein
YP_004546951.1	PFAM: Integral membrane protein TerC; KEGG: hmo:HM1_0419 hypothetical protein
YP_004546952.1	KEGG: drm:Dred_0447 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004546953.1	KEGG: dae:Dtox_3064 hypothetical protein
YP_004546954.1	PFAM: MgtC/SapB transporter; KEGG: drm:Dred_0446 MgtC/SapB transporter
YP_004546955.1	TIGRFAM: phosphatidylserine decarboxylase; KEGG: drm:Dred_0445 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related
YP_004546956.1	KEGG: drm:Dred_0444 hypothetical protein
YP_004546957.1	PFAM: amino acid permease-associated region; KEGG: gwc:GWCH70_0831 amino acid permease-associated region
YP_004546958.1	TIGRFAM: alpha-glucan phosphorylase; KEGG: drm:Dred_0443 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_004546959.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_0442 hypothetical protein
YP_004546960.1	SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: dvm:DvMF_1477 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein
YP_004546961.1	KEGG: dae:Dtox_3366 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004546962.1	KEGG: mfs:MFS40622_0132 hypothetical protein
YP_004546963.1	KEGG: tpd:Teth39_1182 ATPase central domain-containing protein
YP_004546964.1	KEGG: hor:Hore_11230 hypothetical protein
YP_004546965.1	KEGG: dae:Dtox_2737 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004546966.1	KEGG: drm:Dred_1592 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24
YP_004546967.1	KEGG: pca:Pcar_2485 hypothetical protein
YP_004546968.1	KEGG: amt:Amet_3208 integral membrane sensor signal transduction histidine kinase
YP_004546970.1	KEGG: cag:Cagg_1995 protein of unknown function UPF0052 and CofD
YP_004546971.1	KEGG: drm:Dred_2589 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_004546972.1	KEGG: ath:AT2G38250 DNA-binding protein-related
YP_004546973.1	KEGG: dmo:Dmoj_GI19701 GI19701 gene product from transcript GI19701-RA
YP_004546974.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: cja:CJA_1396 putative hemolysin
YP_004546975.1	KEGG: drm:Dred_1223 hypothetical protein
YP_004546976.1	KEGG: amt:Amet_2433 hypothetical protein
YP_004546977.1	KEGG: bbe:BBR47_06310 hypothetical protein
YP_004546978.1	KEGG: gka:GK0543 hypothetical protein
YP_004546979.1	KEGG: dhd:Dhaf_4814 hypothetical protein
YP_004546980.1	KEGG: gym:GYMC10_5372 phage uncharacterized protein, XkdX family; TIGRFAM: phage uncharacterized protein, XkdX family; PFAM: uncharacterised protein XkdX
YP_004546981.1	KEGG: gym:GYMC10_5391 hypothetical protein
YP_004546982.1	PFAM: Baseplate J family protein; KEGG: gym:GYMC10_5392 baseplate J family protein
YP_004546983.1	KEGG: dae:Dtox_4249 hypothetical protein
YP_004546984.1	KEGG: dae:Dtox_4248 hypothetical protein
YP_004546985.1	KEGG: dae:Dtox_4247 hypothetical protein
YP_004546986.1	KEGG: dae:Dtox_4246 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004546987.1	KEGG: dae:Dtox_4245 phage tail tape measure protein, TP901 family
YP_004546988.1	KEGG: gym:GYMC10_5398 hypothetical protein
YP_004546989.1	PFAM: XkdN-like protein; KEGG: dae:Dtox_4243 XkdN-like protein
YP_004546990.1	PFAM: XkdM protein, phage-like element PBSX; KEGG: gym:GYMC10_5400 XkdM protein, phage-like element PBSX
YP_004546991.1	KEGG: dae:Dtox_4241 hypothetical protein
YP_004546992.1	KEGG: dae:Dtox_4240 hypothetical protein
YP_004546993.1	KEGG: dae:Dtox_4239 hypothetical protein
YP_004546994.1	KEGG: ani:AN0247.2 hypothetical protein
YP_004546995.1	KEGG: amt:Amet_2405 putative sigma factor
YP_004546996.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: dau:Daud_1912 putative prophage repressor
YP_004546997.1	PFAM: transposase IS4 family protein; KEGG: toc:Toce_1418 transposase IS4 family protein
YP_004546998.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: ssm:Spirs_2639 GAF modulated sigma54 specific transcriptional regulator, fis family; SMART: AAA ATPase; PAS domain containing protein
YP_004546999.1	PFAM: Aldehyde Dehydrogenase; KEGG: ssm:Spirs_2638 aldehyde dehydrogenase
YP_004547000.1	KEGG: sak:SAK_1440 surface protein Spb1
YP_004547001.1	PFAM: Methyltransferase type 11; KEGG: bai:BAA_1355 hypothetical protein
YP_004547002.1	PFAM: alpha/beta hydrolase fold; KEGG: cbi:CLJ_B2157 alpha/beta superfamily hydrolase
YP_004547003.1	PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_3199 nitrate reductase, gamma subunit
YP_004547004.1	PFAM: regulatory protein TetR; KEGG: tjr:TherJR_0157 transcriptional regulator, TetR family
YP_004547005.1	KEGG: dat:HRM2_36750 hypothetical protein
YP_004547006.1	KEGG: cth:Cthe_3214 hypothetical protein
YP_004547007.1	KEGG: cth:Cthe_3213 hypothetical protein
YP_004547008.1	PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3212 hypothetical protein
YP_004547009.1	PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3211 hypothetical protein
YP_004547010.1	PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3210 hypothetical protein
YP_004547011.1	KEGG: cbb:CLD_2403 hypothetical protein
YP_004547012.1	KEGG: pct:PC1_3262 hypothetical protein
YP_004547013.1	KEGG: dhd:Dhaf_2005 zinc finger SWIM domain protein
YP_004547014.1	KEGG: dhd:Dhaf_0677 hypothetical protein
YP_004547015.1	KEGG: btb:BMB171_P0033 hypothetical protein
YP_004547016.1	KEGG: ccb:Clocel_0824 hypothetical protein
YP_004547017.1	KEGG: bca:BCE_0422 hypothetical protein
YP_004547018.1	PFAM: Resolvase domain; Recombinase; KEGG: ccb:Clocel_0847 resolvase domain
YP_004547019.1	PFAM: Resolvase domain; Recombinase; KEGG: ccb:Clocel_0846 resolvase domain
YP_004547020.1	KEGG: ccb:Clocel_0844 hypothetical protein
YP_004547021.1	KEGG: cby:CLM_2289 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_004547022.1	KEGG: cce:Ccel_2819 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis
YP_004547023.1	KEGG: dfe:Dfer_3080 type III restriction protein res subunit
YP_004547024.1	KEGG: cai:Caci_4910 glycoside hydrolase family 59
YP_004547025.1	KEGG: pfs:PFLU3992 putative gluconokinase
YP_004547026.1	KEGG: bfu:BC1G_00232 hypothetical protein
YP_004547027.1	KEGG: scl:sce6752 hypothetical protein
YP_004547028.1	KEGG: mmw:Mmwyl1_3120 ribulose-bisphosphate carboxylase
YP_004547029.1	KEGG: mhu:Mhun_3126 PKD
YP_004547030.1	PFAM: G-protein, gamma-like subunit; KEGG: cth:Cthe_1709 phage-related protein-like protein
YP_004547031.1	KEGG: cpe:CPE1128 hypothetical protein
YP_004547032.1	TIGRFAM: phage major tail protein, phi13 family; KEGG: clj:CLJU_c03640 phage protein
YP_004547033.1	KEGG: bcb:BCB4264_A2628 conserved structural protein
YP_004547034.1	TIGRFAM: phage protein, HK97 gp10 family; KEGG: gyc:GYMC61_0631 phage protein, HK97 GP10 family
YP_004547035.1	TIGRFAM: phage head-tail adaptor; KEGG: bcu:BCAH820_4380 phage head-tail adaptor, putative
YP_004547036.1	TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ccb:Clocel_0785 bacteriophage QLRG family, putative DNA packaging
YP_004547037.1	KEGG: ckr:CKR_2339 hypothetical protein
YP_004547038.1	TIGRFAM: phage major capsid protein, HK97 family; KEGG: hmo:HM1_2880 phage major capsid protein, hk97 family
YP_004547039.1	PFAM: peptidase S14 ClpP; KEGG: cce:Ccel_2835 peptidase S14 ClpP
YP_004547040.1	KEGG: bse:Bsel_3007 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein
YP_004547041.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: cth:Cthe_0824 copper amine oxidase-like protein
YP_004547042.1	KEGG: ckr:CKR_2343 hypothetical protein; manually curated; PFAM: Terminase
YP_004547043.1	KEGG: hmo:HM1_2957 hypothetical protein
YP_004547044.1	PFAM: AIG2 family protein; KEGG: thx:Thet_1660 AIG2 family protein
YP_004547045.1	KEGG: ttm:Tthe_0787 hypothetical protein
YP_004547046.1	KEGG: thx:Thet_1662 hypothetical protein
YP_004547047.1	KEGG: hmo:HM1_2948 hypothetical protein
YP_004547048.1	KEGG: hmo:HM1_2946 DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_004547049.1	KEGG: hmo:HM1_2945 hypothetical protein
YP_004547050.1	KEGG: swo:Swol_0287 hypothetical protein
YP_004547051.1	TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: swo:Swol_0286 hypothetical protein
YP_004547052.1	KEGG: cce:Ccel_2845 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_004547053.1	KEGG: hmo:HM1_2944 hypothetical protein
YP_004547054.1	KEGG: hmo:HM1_2943 phage-associated helicase, SNF2 family; PFAM: SNF2-related protein; SMART: DEAD-like helicase
YP_004547055.1	PFAM: VRR-NUC domain-containing protein; KEGG: amt:Amet_4048 VRR_NUC domain-containing protein
YP_004547056.1	PFAM: virulence-associated E family protein; KEGG: thx:Thet_1672 virulence-associated E family protein
YP_004547057.1	KEGG: hmo:HM1_2897 hypothetical protein
YP_004547058.1	PFAM: phage antirepressor protein; BRO domain protein; KEGG: clj:CLJU_c03400 putative prophage antirepressor
YP_004547059.1	KEGG: thx:Thet_1675 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase
YP_004547060.1	PFAM: NUMOD4 domain protein; HNH endonuclease; KEGG: cce:Ccel_2857 HNH endonuclease
YP_004547061.1	KEGG: thx:Thet_1676 hypothetical protein
YP_004547062.1	KEGG: thx:Thet_1677 hypothetical protein
YP_004547063.1	KEGG: thx:Thet_1678 rRNA biogenesis protein rrp5
YP_004547064.1	KEGG: bca:BCE_0373 hypothetical protein
YP_004547065.1	PFAM: Sigma-70 region 4 type 2; KEGG: mcu:HMPREF0573_11266 hypothetical protein
YP_004547066.1	KEGG: thx:Thet_1681 hypothetical protein
YP_004547067.1	KEGG: thx:Thet_1682 hypothetical protein
YP_004547068.1	KEGG: thx:Thet_1683 hypothetical protein
YP_004547069.1	KEGG: thx:Thet_1684 hypothetical protein
YP_004547070.1	TIGRFAM: DNA binding domain protein, excisionase family; KEGG: thx:Thet_1685 DNA-binding domain-containing protein, excisionase family
YP_004547071.1	KEGG: pmz:HMPREF0659_A6123 putative type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase
YP_004547072.1	PFAM: restriction modification system DNA specificity domain; KEGG: nmn:NMCC_1141 hypothetical protein
YP_004547073.1	PFAM: integrase family protein; KEGG: clo:HMPREF0868_0492 phage integrase, N-terminal SAM domain protein
YP_004547074.1	PFAM: restriction modification system DNA specificity domain; KEGG: hpa:HPAG1_0437 type I restriction enzyme S protein
YP_004547075.1	KEGG: aca:ACP_3246 hypothetical protein
YP_004547076.1	TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: mpi:Mpet_1680 type I site-specific deoxyribonuclease; SMART: DEAD-like helicase
YP_004547077.1	PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: fma:FMG_1371 hypothetical protein
YP_004547078.1	KEGG: drm:Dred_2984 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein
YP_004547079.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: tjr:TherJR_2694 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_004547080.1	PFAM: thioesterase superfamily protein; KEGG: dae:Dtox_3930 thioesterase superfamily protein
YP_004547081.1	TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: drm:Dred_2985 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase
YP_004547082.1	KEGG: drm:Dred_2986 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_004547083.1	TIGRFAM: enolase; KEGG: drm:Dred_2987 phosphopyruvate hydratase; PFAM: Enolase-like
YP_004547084.1	TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: drm:Dred_2988 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein
YP_004547085.1	TIGRFAM: triosephosphate isomerase; KEGG: drm:Dred_2989 triose-phosphate isomerase; PFAM: triosephosphate isomerase
YP_004547086.1	KEGG: drm:Dred_2990 phosphoglycerate kinase; PFAM: phosphoglycerate kinase
YP_004547087.1	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: drm:Dred_2991 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004547088.1	KEGG: drm:Dred_2992 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor
YP_004547089.1	KEGG: drm:Dred_2993 beta-lactamase domain-containing protein
YP_004547090.1	PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: drm:Dred_2994 hypothetical protein
YP_004547091.1	PFAM: polysaccharide deacetylase; KEGG: drm:Dred_3052 polysaccharide deacetylase
YP_004547092.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: drm:Dred_3053 protein of unknown function UPF0052 and CofD
YP_004547093.1	KEGG: drm:Dred_3054 hypothetical protein
YP_004547094.1	KEGG: drm:Dred_3055 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr
YP_004547095.1	KEGG: drm:Dred_3056 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3
YP_004547096.1	TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: drm:Dred_3057 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein
YP_004547097.1	PFAM: regulatory protein TetR; KEGG: drm:Dred_3059 TetR family transcriptional regulator
YP_004547098.1	PFAM: secretion protein HlyD family protein; KEGG: drm:Dred_3060 secretion protein HlyD family protein
YP_004547099.1	KEGG: drm:Dred_3061 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004547100.1	PFAM: ABC-2 type transporter; KEGG: drm:Dred_3062 ABC-2 type transporter
YP_004547101.1	PFAM: ABC-2 type transporter; KEGG: drm:Dred_3063 ABC-2 type transporter
YP_004547102.1	KEGG: drm:Dred_3065 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related
YP_004547103.1	TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: drm:Dred_3066 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein
YP_004547104.1	KEGG: drm:Dred_3067 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily
YP_004547105.1	KEGG: drm:Dred_3068 hypothetical protein
YP_004547106.1	PFAM: RNA-binding protein, predicted; KEGG: toc:Toce_0582 RNA-binding protein, predicted
YP_004547107.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_3069 PDZ/DHR/GLGF domain-containing protein
YP_004547108.1	TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: drm:Dred_3070 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_004547109.1	PFAM: Peptidase M23; KEGG: drm:Dred_3071 peptidase M23B
YP_004547110.1	PFAM: protein of unknown function DUF214; KEGG: drm:Dred_3072 hypothetical protein
YP_004547111.1	TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: drm:Dred_3073 cell division ATP-binding protein FtsE; SMART: AAA ATPase
YP_004547112.1	PFAM: acyltransferase 3; KEGG: bbe:BBR47_30820 hypothetical protein
YP_004547113.1	PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: drm:Dred_3074 transketolase, central region
YP_004547114.1	PFAM: Transketolase domain-containing protein; KEGG: drm:Dred_3075 transketolase domain-containing protein
YP_004547115.1	PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: drm:Dred_3076 hypothetical protein
YP_004547116.1	manually curated; KEGG: mcc:698629 G protein-coupled receptor 124
YP_004547117.1	KEGG: drm:Dred_3078 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein
YP_004547118.1	KEGG: drm:Dred_3079 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA
YP_004547119.1	KEGG: drm:Dred_3080 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004547120.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: rrs:RoseRS_0589 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein
YP_004547121.1	KEGG: drm:Dred_3081 phosphoribosyltransferase
YP_004547122.1	KEGG: drm:Dred_3084 hypothetical protein
YP_004547123.1	PFAM: protein of unknown function DUF1659; KEGG: drm:Dred_3085 hypothetical protein
YP_004547124.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: drm:Dred_3086 diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein
YP_004547125.1	KEGG: drm:Dred_3087 hypothetical protein
YP_004547126.1	KEGG: drm:Dred_3094 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004547127.1	KEGG: drm:Dred_3095 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004547128.1	TIGRFAM: S-adenosylmethionine synthetase; KEGG: drm:Dred_3096 methionine adenosyltransferase; PFAM: S-adenosylmethionine synthetase
YP_004547129.1	KEGG: drm:Dred_3097 PRC-barrel domain-containing protein; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein
YP_004547130.1	KEGG: drm:Dred_3098 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein
YP_004547131.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain-containing protein; KEGG: drm:Dred_3099 peptidase S8/S53 subtilisin kexin sedolisin
YP_004547132.1	KEGG: drm:Dred_3100 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase
YP_004547134.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: ttm:Tthe_0924 NAD-dependent epimerase/dehydratase
YP_004547135.1	KEGG: drm:Dred_3101 UTP-glucose-1-phosphate uridylyltransferase GalU; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_004547136.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: drm:Dred_3102 glycosyl transferase family protein
YP_004547137.1	KEGG: drm:Dred_3103 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_004547138.1	KEGG: drm:Dred_3104 hypothetical protein
YP_004547139.1	KEGG: drm:Dred_3106 hypothetical protein
YP_004547140.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_3107 copper amine oxidase domain-containing protein
YP_004547141.1	TIGRFAM: polysaccharide pyruvyl transferase CsaB; KEGG: drm:Dred_3108 polysaccharide pyruvyl transferase
YP_004547142.1	KEGG: drm:Dred_3109 hypothetical protein
YP_004547143.1	PFAM: glucose-inhibited division protein A; KEGG: drm:Dred_3110 hypothetical protein
YP_004547144.1	KEGG: drm:Dred_3112 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator
YP_004547145.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: drm:Dred_3113 WecB/TagA/CpsF family glycosyl transferase; PFAM: glycosyl transferase WecB/TagA/CpsF
YP_004547146.1	KEGG: dae:Dtox_0866 hypothetical protein
YP_004547147.1	TIGRFAM: prevent-host-death family protein; KEGG: dae:Dtox_0867 prevent-host-death family protein
YP_004547148.1	PFAM: lipolytic protein G-D-S-L family; copper amine oxidase-like domain-containing protein; KEGG: clj:CLJU_c08400 putative SGNH hydrolase
YP_004547149.1	KEGG: mta:Moth_2139 beta-mannanase-like
YP_004547150.1	KEGG: dbr:Deba_2074 hypothetical protein
YP_004547151.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: dbr:Deba_2073 membrane bound O-acyl transferase MBOAT family protein
YP_004547152.1	PFAM: Methyltransferase type 11; KEGG: dae:Dtox_0855 methyltransferase type 11
YP_004547153.1	PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3802 glycosyl transferase, group 1
YP_004547154.1	PFAM: Methyltransferase type 11; KEGG: mar:MAE_13200 putative methyltransferase
YP_004547155.1	KEGG: ecr:ECIAI1_2101 ATP binding component of ABC-transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004547156.1	KEGG: pap:PSPA7_6241 membrane subunit of A-band LPS efflux transporter; manually curated; PFAM: ABC-2 type transporter
YP_004547157.1	PFAM: glycosyl transferase group 1; KEGG: rpi:Rpic_1156 glycosyl transferase group 1
YP_004547158.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: drm:Dred_3126 phosphomannomutase
YP_004547159.1	PFAM: glycosyl transferase group 1; KEGG: thx:Thet_0654 glycosyl transferase group 1
YP_004547160.1	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: hmo:HM1_1237 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase
YP_004547161.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: ttr:Tter_1710 NAD-dependent epimerase/dehydratase
YP_004547162.1	KEGG: bbe:BBR47_17580 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004547163.1	TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase
YP_004547164.1	PFAM: O-antigen polymerase; KEGG: drm:Dred_3138 O-antigen polymerase
YP_004547165.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_2029 hypothetical protein
YP_004547166.1	KEGG: dae:Dtox_4152 outer membrane protein-like protein
YP_004547167.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_4154 copper amine oxidase domain protein
YP_004547168.1	KEGG: drm:Dred_3144 rod shape-determining protein Mbl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl
YP_004547169.1	TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: drm:Dred_3145 regulatory protein, DeoR
YP_004547170.1	PFAM: Peptidase M23; KEGG: drm:Dred_3146 peptidase M23B
YP_004547171.1	KEGG: drm:Dred_3147 SpoIID/LytB domain-containing protein; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D
YP_004547172.1	KEGG: drm:Dred_3148 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_004547173.1	KEGG: drm:Dred_3149 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like
YP_004547174.1	TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: drm:Dred_3150 F0F1 ATP synthase subunit beta; SMART: AAA ATPase
YP_004547175.1	KEGG: drm:Dred_3151 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit
YP_004547176.1	KEGG: drm:Dred_3152 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein
YP_004547177.1	KEGG: drm:Dred_3153 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit
YP_004547178.1	KEGG: drm:Dred_3154 ATP synthase F0, B subunit; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit
YP_004547179.1	KEGG: drm:Dred_3155 ATP synthase F0, C subunit; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit
YP_004547180.1	KEGG: drm:Dred_3156 ATP synthase F0, A subunit; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit
YP_004547181.1	KEGG: drm:Dred_3157 hypothetical protein
YP_004547182.1	KEGG: drm:Dred_3158 hypothetical protein
YP_004547183.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: drm:Dred_3159 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004547184.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: drm:Dred_3160 MazG nucleotide pyrophosphohydrolase
YP_004547185.1	KEGG: drm:Dred_3161 CMP/dCMP deaminase, zinc-binding; PFAM: CMP/dCMP deaminase zinc-binding
YP_004547186.1	KEGG: drm:Dred_3162 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase
YP_004547187.1	TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: drm:Dred_3163 RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase
YP_004547188.1	KEGG: drm:Dred_3164 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004547189.1	PFAM: protein of unknown function DUF204; KEGG: drm:Dred_3165 hypothetical protein
YP_004547190.1	KEGG: drm:Dred_3166 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein
YP_004547191.1	KEGG: drm:Dred_3169 HemK family modification methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small
YP_004547192.1	KEGG: drm:Dred_3170 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein
YP_004547193.1	PFAM: protein of unknown function DUF1385; KEGG: drm:Dred_3171 hypothetical protein
YP_004547194.1	KEGG: drm:Dred_3172 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31
YP_004547195.1	KEGG: drm:Dred_3173 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004547196.1	TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: drm:Dred_3174 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase
YP_004547197.1	PFAM: Protein of unknown function DUF2062; KEGG: pth:PTH_2836 hypothetical protein
YP_004547198.1	KEGG: drm:Dred_3175 putative transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_004547199.1	TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: drm:Dred_3176 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II
YP_004547200.1	KEGG: drm:Dred_3177 hypothetical protein
YP_004547201.1	KEGG: drm:Dred_3178 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004547202.1	KEGG: drm:Dred_3179 hypothetical protein
YP_004547203.1	KEGG: drm:Dred_3180 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49
YP_004547204.1	TIGRFAM: CTP synthase; KEGG: drm:Dred_3181 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I
YP_004547205.1	TIGRFAM: XapX domain protein; KEGG: drm:Dred_3182 hypothetical protein
YP_004547206.1	TIGRFAM: arginyl-tRNA synthetase; KEGG: drm:Dred_3183 arginyl-tRNA synthetase
YP_004547207.1	PFAM: Domain of unknown function DUF1934; KEGG: drm:Dred_3184 hypothetical protein
YP_004547208.1	KEGG: drm:Dred_3185 putative dissimilatory sulfite reductase subunit D
YP_004547209.1	TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein
YP_004547210.1	TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: drm:Dred_3187 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region
YP_004547211.1	KEGG: drm:Dred_3188 indolepyruvate ferredoxin oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain
YP_004547212.1	KEGG: drm:Dred_3189 indolepyruvate ferredoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_004547213.1	KEGG: drm:Dred_3190 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_004547215.1	PFAM: aminotransferase class I and II; KEGG: drm:Dred_3192 aminotransferase, class I and II
YP_004547216.1	KEGG: drm:Dred_3193 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type
YP_004547217.1	TIGRFAM: germination protein YpeB; KEGG: drm:Dred_3194 peptidase
YP_004547218.1	KEGG: drm:Dred_3195 cell wall hydrolase, SleB; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein
YP_004547219.1	KEGG: drm:Dred_3196 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_004547220.1	TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; KEGG: drm:Dred_3197 DsrC family protein; PFAM: DsrC family protein
YP_004547221.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_3198 hypothetical protein
YP_004547222.1	PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_3199 nitrate reductase, gamma subunit
YP_004547223.1	KEGG: drm:Dred_3200 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004547224.1	KEGG: drm:Dred_3201 hypothetical protein
YP_004547225.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: sth:STH1727 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop
YP_004547226.1	KEGG: cno:NT01CX_0942 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain
YP_004547227.1	PFAM: peptidase M29 aminopeptidase II; KEGG: drm:Dred_3214 putative aminopeptidase
YP_004547228.1	KEGG: bbe:BBR47_22460 ornithine aminotransferase; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III
YP_004547229.1	KEGG: tpe:Tpen_1757 hypothetical protein
YP_004547231.1	KEGG: cyb:CYB_0114 segregation and condensation protein B
YP_004547232.1	PFAM: RNA binding S1 domain protein; KEGG: xal:XALc_1602 30S ribosomal protein S1
YP_004547233.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: tte:TTE2081 transcriptional regulator; SMART: ParB domain protein nuclease
YP_004547234.1	KEGG: dau:Daud_0815 TraG family protein
YP_004547235.1	PFAM: TRAG family protein; KEGG: adg:Adeg_0821 TraG family protein
YP_004547236.1	KEGG: dae:Dtox_2470 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004547237.1	KEGG: tmt:Tmath_0071 StbA family protein
YP_004547238.1	PFAM: VanW family protein; KEGG: mta:Moth_0694 copper amine oxidase-like
YP_004547239.1	KEGG: drm:Dred_0966 hypothetical protein
YP_004547240.1	KEGG: drm:Dred_0965 hypothetical protein
YP_004547241.1	KEGG: drm:Dred_0969 hypothetical protein
YP_004547242.1	KEGG: saq:Sare_3343 hypothetical protein
YP_004547243.1	KEGG: gme:Gmet_2469 fibronectin, type III
YP_004547244.1	KEGG: drm:Dred_0968 hypothetical protein
YP_004547245.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_0967 phage integrase family protein
YP_004547247.1	PFAM: glycosyl transferase family 2; KEGG: mbn:Mboo_1769 glycosyl transferase family protein
YP_004547248.1	KEGG: dae:Dtox_2477 hypothetical protein
YP_004547249.1	KEGG: dae:Dtox_2478 hypothetical protein
YP_004547250.1	PFAM: TadE family protein; KEGG: dae:Dtox_2479 TadE family protein
YP_004547251.1	PFAM: peptidase A24A prepilin type IV; KEGG: dae:Dtox_2480 peptidase A24A prepilin type IV
YP_004547252.1	KEGG: dae:Dtox_2482 hypothetical protein
YP_004547253.1	KEGG: dae:Dtox_2485 hypothetical protein
YP_004547254.1	PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2486 type II secretion system protein
YP_004547255.1	PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2487 type II secretion system protein
YP_004547256.1	PFAM: type II secretion system protein E; KEGG: dae:Dtox_2488 type II secretion system protein E
YP_004547257.1	KEGG: dae:Dtox_2490 septum formation inhibitor-activating ATPase-like protein
YP_004547258.1	KEGG: dae:Dtox_2491 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein
YP_004547259.1	KEGG: dae:Dtox_2492 hypothetical protein
YP_004547260.1	KEGG: dae:Dtox_2493 hypothetical protein
YP_004547261.1	KEGG: drm:Dred_2787 hypothetical protein
YP_004547262.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_0168 hypothetical protein
YP_004547263.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: drm:Dred_0937 filamentation induced by cAMP protein Fic
YP_004547264.1	KEGG: drm:Dred_2787 hypothetical protein
YP_004547265.1	PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_0939 copper amine oxidase domain-containing protein
YP_004547266.1	PFAM: SpoVT/AbrB domain-containing protein; KEGG: sru:SRU_0234 transcriptional regulator, AbrB family protein
YP_004547267.1	KEGG: mta:Moth_1940 hypothetical protein
YP_004547268.1	KEGG: mta:Moth_1941 hypothetical protein
YP_004547269.1	KEGG: dae:Dtox_2498 PilT protein domain protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc
YP_004547270.1	KEGG: dae:Dtox_2499 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein
YP_004547271.1	KEGG: nca:Noca_3116 type II secretion system protein E
YP_004547272.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_035 hypothetical protein; SMART: GGDEF domain containing protein
YP_004547273.1	KEGG: dae:Dtox_2503 chromosome partitioning ATPase-like protein
YP_004547274.1	PFAM: Peptidase M23; Lytic transglycosylase catalytic; KEGG: drm:Dred_0935 peptidase M23B
YP_004547275.1	KEGG: drm:Dred_0934 hypothetical protein
YP_004547276.1	KEGG: drm:Dred_0933 hypothetical protein
YP_004547277.1	KEGG: drm:Dred_0931 hypothetical protein
YP_004547278.1	KEGG: drm:Dred_0930 hypothetical protein
YP_004547279.1	KEGG: drm:Dred_0928 hypothetical protein
YP_004547280.1	KEGG: drm:Dred_0927 hypothetical protein
YP_004547281.1	KEGG: drm:Dred_0926 hypothetical protein
YP_004547282.1	KEGG: mse:Msed_1376 binding-protein-dependent transport systems inner membrane component
YP_004547283.1	KEGG: bcy:Bcer98_1772 hypothetical protein
YP_004547284.1	KEGG: hmg:100211454 similar to predicted protein
YP_004547285.1	KEGG: mta:Moth_0301 hypothetical protein
YP_004547286.1	KEGG: mta:Moth_0300 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004547287.1	PFAM: protein of unknown function DUF955; KEGG: dtu:Dtur_1293 protein of unknown function DUF955
YP_004547288.1	KEGG: nth:Nther_1924 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver
YP_004547289.1	KEGG: hmo:HM1_0387 hypothetical protein
YP_004547290.1	PFAM: regulatory protein TetR; KEGG: dae:Dtox_3827 transcriptional regulator, TetR family
YP_004547291.1	PFAM: alpha/beta hydrolase fold; KEGG: dae:Dtox_3824 esterase/lipase-like protein
YP_004547292.1	PFAM: HI0933 family protein; KEGG: drm:Dred_1583 glucose-inhibited division protein A
YP_004547293.1	KEGG: drm:Dred_3215 hypothetical protein
YP_004547294.1	PFAM: Coat F domain protein; KEGG: hmo:HM1_1940 conserved hypothetical protein, possible spore coat protein, cotf
YP_004547295.1	PFAM: protein of unknown function UPF0153; KEGG: dev:DhcVS_1385 reductive dehalogenase associated protein
YP_004547296.1	KEGG: dhd:Dhaf_0755 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase
YP_004547297.1	KEGG: drm:Dred_0629 type IV pilus assembly PilZ
YP_004547298.1	TIGRFAM: methionine-R-sulfoxide reductase; KEGG: rci:LRC347 peptide methionine sulfoxide reductase subunit B; PFAM: Methionine sulfoxide reductase B
YP_004547299.1	TIGRFAM: peptide methionine sulfoxide reductase; KEGG: dae:Dtox_0373 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A
YP_004547300.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: dae:Dtox_0767 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein
YP_004547301.1	PFAM: protein of unknown function DUF401; KEGG: gsu:GSU1012 hypothetical protein
YP_004547302.1	KEGG: drm:Dred_2745 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein
YP_004547303.1	TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; KEGG: drm:Dred_3223 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein
YP_004547304.1	PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: cbe:Cbei_3496 FAD linked oxidase domain-containing protein
YP_004547305.1	KEGG: bcz:BCZK1642 tagatose-6-phosphate kinase, phosphofructokinase I; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein
YP_004547306.1	TIGRFAM: ketose-bisphosphate aldolase; KEGG: str:Sterm_1967 ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II
YP_004547307.1	PFAM: PfkB domain protein; KEGG: hor:Hore_22680 PfkB domain protein
YP_004547308.1	PFAM: inner-membrane translocator; KEGG: hor:Hore_22690 monosaccharide-transporting ATPase
YP_004547309.1	KEGG: str:Sterm_3540 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004547310.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: str:Sterm_3541 periplasmic binding protein/LacI transcriptional regulator
YP_004547311.1	KEGG: str:Sterm_3542 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI
YP_004547312.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aoe:Clos_2355 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004547313.1	KEGG: dsy:DSY4988 hypothetical protein
YP_004547314.1	TIGRFAM: diguanylate cyclase; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; GGDEF domain containing protein; KEGG: vvy:VV0692 putative regulator of cell autolysis; SMART: GGDEF domain containing protein
YP_004547315.1	KEGG: bbe:BBR47_29850 probable transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR
YP_004547316.1	PFAM: Integral membrane protein TerC; KEGG: bbe:BBR47_11800 hypothetical protein
YP_004547317.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: oca:OCAR_6740 integral membrane protein
YP_004547318.1	KEGG: oca:OCAR_6742 hypothetical protein
YP_004547319.1	KEGG: mch:Mchl_4220 hypothetical protein
YP_004547320.1	KEGG: dhd:Dhaf_4634 sulfoacetaldehyde acetyltransferase; TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein
YP_004547321.1	KEGG: dhd:Dhaf_0190 hypothetical protein
YP_004547322.1	KEGG: dhd:Dhaf_0191 succinate--CoA ligase (ADP-forming); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase
YP_004547323.1	KEGG: dhd:Dhaf_0192 CoA-binding domain protein; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase
YP_004547324.1	PFAM: transcription factor CarD; KEGG: drm:Dred_3244 CarD family transcriptional regulator
YP_004547325.1	KEGG: drm:Dred_3245 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004547326.1	KEGG: bha:BH1154 hypothetical protein; PFAM: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein
YP_004547327.1	KEGG: bmd:BMD_5228 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver
YP_004547328.1	PFAM: chemotaxis sensory transducer; Cache domain protein; KEGG: dhd:Dhaf_1064 methyl-accepting chemotaxis sensory transducer with cache sensor
YP_004547329.1	KEGG: bbe:BBR47_48290 hypothetical protein
YP_004547330.1	KEGG: drm:Dred_3241 hypothetical protein
YP_004547331.1	KEGG: drm:Dred_3242 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004547332.1	KEGG: drm:Dred_3243 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004547333.1	KEGG: dhd:Dhaf_3597 hypothetical protein
YP_004547334.1	KEGG: amt:Amet_4250 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein
YP_004547335.1	PFAM: nitroreductase; KEGG: mpl:Mpal_1484 nitroreductase
YP_004547336.1	PFAM: NADPH-dependent FMN reductase; KEGG: mac:MA1860 iron-sulfur flavoprotein
YP_004547337.1	KEGG: cwo:Cwoe_4680 transcriptional regulator, HxlR family; manually curated; PFAM: helix-turn-helix HxlR type
YP_004547338.1	KEGG: dhd:Dhaf_2626 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004547339.1	PFAM: L-fucose isomerase-like-like; KEGG: bmq:BMQ_3645 hypothetical protein
YP_004547340.1	TIGRFAM: ketose-bisphosphate aldolase; KEGG: dsy:DSY1493 hypothetical protein; PFAM: ketose-bisphosphate aldolase class-II; thiamine monophosphate synthase
YP_004547341.1	PFAM: oxidoreductase domain protein; KEGG: cma:Cmaq_1495 oxidoreductase domain-containing protein
YP_004547342.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_2632 binding-protein-dependent transport systems inner membrane component
YP_004547343.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_2631 binding-protein-dependent transport systems inner membrane component
YP_004547344.1	PFAM: extracellular solute-binding protein family 1; KEGG: dhd:Dhaf_2627 extracellular solute-binding protein family 1
YP_004547345.1	KEGG: dsy:DSY1498 hypothetical protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase
YP_004547346.1	KEGG: ecq:ECED1_3908 hypothetical protein
YP_004547347.1	PFAM: phosphofructokinase; KEGG: caa:Caka_2312 phosphofructokinase
YP_004547348.1	PFAM: Na+/H+ antiporter NhaC-like; KEGG: nth:Nther_2723 Na+/H+ antiporter NhaC
YP_004547349.1	KEGG: bld:BLi02184 CsaA; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain-containing protein
YP_004547350.1	KEGG: gym:GYMC10_3314 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain
YP_004547351.1	TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: tte:TTE0625 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP
YP_004547352.1	KEGG: cbe:Cbei_4001 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004547353.1	PFAM: protein of unknown function DUF163; KEGG: drm:Dred_3293 hypothetical protein
YP_004547354.1	KEGG: drm:Dred_3294 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_004547355.1	KEGG: drm:Dred_3295 hypothetical protein
YP_004547356.1	PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: drm:Dred_3296 TPR repeat-containing protein
YP_004547357.1	KEGG: drm:Dred_3297 peptidase M23B; PFAM: Peptidase M23; G5 domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004547358.1	PFAM: Radical SAM domain protein; KEGG: drm:Dred_3298 radical SAM domain-containing protein
YP_004547359.1	manually curated; KEGG: drm:Dred_3299 hypothetical protein
YP_004547360.1	KEGG: pmx:PERMA_0406 oligopeptidase A
YP_004547361.1	SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: drm:Dred_3300 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase
YP_004547362.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: drm:Dred_3301 replicative DNA helicase; SMART: AAA ATPase
YP_004547363.1	SMART: AAA ATPase; TIGRFAM: ATP-dependent protease, Lon family; KEGG: drm:Dred_3302 endopeptidase La; PFAM: AAA ATPase central domain protein
YP_004547364.1	KEGG: drm:Dred_3303 ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like
YP_004547365.1	PFAM: Protein of unknown function DUF2232, membrane; KEGG: drm:Dred_3304 membrane protein-like protein
YP_004547366.1	KEGG: dae:Dtox_4353 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18
YP_004547367.1	KEGG: drm:Dred_3307 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n
YP_004547368.1	KEGG: drm:Dred_3308 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like
YP_004547369.1	PFAM: protein of unknown function DUF951; KEGG: drm:Dred_3309 hypothetical protein
YP_004547370.1	PFAM: MscS Mechanosensitive ion channel; KEGG: drm:Dred_3310 MscS mechanosensitive ion channel
YP_004547371.1	PFAM: peptidase M18 aminopeptidase I; KEGG: drm:Dred_3311 putative aminopeptidase 1
YP_004547372.1	PFAM: Colicin V production protein; KEGG: drm:Dred_3312 hypothetical protein
YP_004547373.1	KEGG: drm:Dred_3313 hypothetical protein
YP_004547374.1	KEGG: drm:Dred_3314 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256
YP_004547375.1	manually curated; KEGG: drm:Dred_3316 hypothetical protein
YP_004547376.1	KEGG: drm:Dred_3318 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein
YP_004547377.1	PFAM: protein of unknown function DUF554; KEGG: drm:Dred_3319 hypothetical protein
YP_004547378.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: drm:Dred_3320 ParB-like partition protein; SMART: ParB domain protein nuclease
YP_004547379.1	KEGG: drm:Dred_3321 cobyrinic acid a,c-diamide synthase
YP_004547380.1	KEGG: scl:sce5626 leucine responsive regulatory protein; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type
YP_004547381.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bmd:BMD_1530 LysE family translocator protein
YP_004547382.1	KEGG: drm:Dred_3322 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein
YP_004547383.1	KEGG: drm:Dred_3323 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A
YP_004547384.1	KEGG: drm:Dred_3324 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related
YP_004547385.1	KEGG: drm:Dred_3325 single-stranded nucleic acid binding R3H domain-containing protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein
YP_004547386.1	KEGG: drm:Dred_3326 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein
YP_004547387.1	KEGG: cdl:CDR20291_3539 hypothetical protein; manually curated; PFAM: protein of unknown function DUF37
YP_004547388.1	KEGG: drm:Dred_3328 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein
YP_004547389.1	manually curated; TIGRFAM: ribosomal protein L34; KEGG: tjr:TherJR_3017 ribosomal protein L34; PFAM: ribosomal protein L34