-- dump date 20140619_063723 -- class Genbank::CDS -- table cds_note -- id note YP_007943306.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; manually curated YP_007943307.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_007943308.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_007943310.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_007943311.1 PFAM: Domain of unknown function (DUF370) YP_007943312.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, Gram-positive; DNA gyrase, B subunit YP_007943313.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit YP_007943314.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_007943315.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_007943316.1 PFAM: Aminotransferase class-V YP_007943317.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase YP_007943318.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase YP_007943319.1 PFAM: Phage integrase family YP_007943320.1 PFAM: Helix-turn-helix YP_007943321.1 TIGRFAM: DNA binding domain, excisionase family YP_007943322.1 PFAM: CHC2 zinc finger YP_007943323.1 PFAM: Virulence-associated protein E YP_007943329.1 PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family YP_007943330.1 PFAM: Phage capsid family YP_007943332.1 PFAM: Phage-related minor tail protein YP_007943344.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007943345.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007943346.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_007943348.1 PFAM: Phosphorylase superfamily; TIGRFAM: futalosine nucleosidase YP_007943349.1 PFAM: Putative periplasminc binding protein (DUF178) YP_007943350.1 PFAM: 'Cold-shock' DNA-binding domain YP_007943351.1 PFAM: LysM domain YP_007943352.1 PFAM: Bacterial extracellular solute-binding protein, family 7 YP_007943353.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_007943354.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_007943355.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_007943356.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_007943357.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau YP_007943358.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_007943359.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_007943360.1 PFAM: Sulfite exporter TauE/SafE YP_007943361.1 PFAM: Malate/L-lactate dehydrogenase YP_007943362.1 PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus YP_007943363.1 PFAM: SAF domain YP_007943364.1 PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_007943365.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein YP_007943366.1 PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_007943367.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region YP_007943368.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_007943369.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit YP_007943370.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_007943371.1 PFAM: domain; FAD binding domain YP_007943372.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_007943373.1 PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus YP_007943374.1 PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA YP_007943376.1 PFAM: domain; Transketolase, C-terminal domain YP_007943377.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007943378.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family YP_007943381.1 PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain YP_007943382.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_007943383.1 TIGRFAM: DNA polymerase III, delta' subunit YP_007943384.1 PFAM: PSP1 C-terminal conserved region YP_007943385.1 PFAM: Protein of unknown function (DUF972); manually curated YP_007943386.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_007943387.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007943388.1 PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase YP_007943389.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_007943390.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_007943391.1 PFAM: 3D domain; Domain of unknown function (DUF348); G5 domain YP_007943392.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_007943393.1 PFAM: Protein of unknown function (DUF458) YP_007943394.1 manually curated YP_007943395.1 PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG YP_007943398.1 PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family YP_007943399.1 PFAM: LysM domain YP_007943401.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_007943405.1 PFAM: Heavy-metal-associated domain YP_007943406.1 PFAM: Protein of unknown function, DUF606 YP_007943407.1 PFAM: ZIP Zinc transporter YP_007943408.1 PFAM: LysM domain; L,D-transpeptidase catalytic domain YP_007943409.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_007943410.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_007943411.1 PFAM: Uncharacterized protein family UPF0007 YP_007943412.1 PFAM: SpoVG YP_007943413.1 PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_007943414.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_007943415.1 PFAM: PRC-barrel domain YP_007943416.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_007943418.1 PFAM: Fic/DOC family YP_007943419.1 PFAM: PHP domain YP_007943420.1 PFAM: Calcineurin-like phosphoesterase YP_007943421.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C) YP_007943426.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2191) YP_007943427.1 PFAM: PIN domain YP_007943428.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_007943429.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_007943432.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_007943433.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain YP_007943434.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T YP_007943435.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_007943436.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit YP_007943437.1 PFAM: S4 domain YP_007943439.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain YP_007943440.1 PFAM: YabP family; TIGRFAM: sporulation protein YabP YP_007943441.1 PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ YP_007943442.1 PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R YP_007943443.1 PFAM: TFIIE alpha subunit YP_007943444.1 PFAM: Septum formation initiator YP_007943445.1 PFAM: S1 RNA binding domain YP_007943446.1 PFAM: Ppx/GppA phosphatase family YP_007943447.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E YP_007943448.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_007943449.1 PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_007943450.1 PFAM: Nucleoside diphosphate kinase YP_007943452.1 PFAM: Formate--tetrahydrofolate ligase YP_007943453.1 PFAM: Protein of unknown function DUF134 YP_007943454.1 PFAM: HD domain YP_007943455.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_007943456.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_007943457.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_007943458.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_007943459.1 PFAM: Putative Phosphatase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_007943463.1 PFAM: HIT domain YP_007943464.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_007943466.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug) YP_007943467.1 PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC YP_007943468.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007943469.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007943470.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007943471.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007943472.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_007943474.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007943475.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007943476.1 PFAM: PIN domain YP_007943477.1 PFAM: Flavin reductase like domain; manually curated YP_007943478.1 TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007943480.1 PFAM: Acetyltransferase (GNAT) family YP_007943481.1 TIGRFAM: spore photoproduct lyase YP_007943482.1 PFAM: O-methyltransferase YP_007943483.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007943485.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007943486.1 PFAM: PIN domain YP_007943487.1 PFAM: ABC transporter YP_007943488.1 PFAM: Predicted permease YP_007943489.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007943491.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007943492.1 PFAM: Bacterial regulatory proteins, tetR family YP_007943493.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007943494.1 PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_007943495.1 PFAM: Leucine carboxyl methyltransferase; TIGRFAM: methyltransferase, putative, TIGR00027 family YP_007943496.1 PFAM: O-methyltransferase YP_007943498.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family YP_007943500.1 PFAM: PIN domain YP_007943501.1 PFAM: Bacterial regulatory proteins, luxR family YP_007943504.1 PFAM: ABC transporter YP_007943505.1 PFAM: Bacterial regulatory proteins, gntR family YP_007943506.1 manually curated YP_007943507.1 PFAM: Transposase domain (DUF772) YP_007943510.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM) YP_007943511.1 PFAM: Type I restriction modification DNA specificity domain; manually curated YP_007943512.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_007943513.1 PFAM: Protein of unknown function DUF45 YP_007943518.1 PFAM: BlaR1 peptidase M56 YP_007943520.1 PFAM: Fic/DOC family YP_007943523.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3559) YP_007943524.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain YP_007943525.1 PFAM: Type I restriction modification DNA specificity domain YP_007943527.1 PFAM: Radical SAM superfamily; TIGRFAM: spore photoproduct lyase YP_007943528.1 PFAM: O-methyltransferase YP_007943529.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_007943530.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain YP_007943531.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; manually curated YP_007943532.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain YP_007943533.1 PFAM: Cysteine-rich domain; Flavin containing amine oxidoreductase YP_007943535.1 PFAM: Methyltransferase domain YP_007943536.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein YP_007943537.1 PFAM: Radical SAM superfamily YP_007943538.1 PFAM: AMP-binding enzyme YP_007943539.1 PFAM: TrkA-N domain; XdhC and CoxI family YP_007943540.1 PFAM: HD domain; Uncharacterized protein family UPF0007 YP_007943541.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase YP_007943542.1 PFAM: Domain of unknown function (DUF364) YP_007943543.1 PFAM: ABC transporter YP_007943544.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: NifC-like ABC-type porter YP_007943545.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_007943547.1 PFAM: Domain of Unknown Function (DUF1540) YP_007943548.1 PFAM: Amidohydrolase family YP_007943549.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_007943550.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_007943551.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_007943552.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase YP_007943553.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_007943554.1 PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain YP_007943555.1 PFAM: BioY family YP_007943556.1 PFAM: Calcineurin-like phosphoesterase YP_007943557.1 PFAM: Bacterial Ig-like domain (group 2); S-layer homology domain; Oxidoreductase molybdopterin binding domain YP_007943558.1 PFAM: Bacterial Ig-like domain (group 2); Oxidoreductase molybdopterin binding domain YP_007943559.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007943560.1 PFAM: Uncharacterized conserved protein (DUF2149) YP_007943561.1 PFAM: Copper amine oxidase N-terminal domain; Oxidoreductase molybdopterin binding domain YP_007943562.1 PFAM: Bacterial Ig-like domain (group 2); Oxidoreductase molybdopterin binding domain; Protein of unknown function (DUF1533) YP_007943563.1 PFAM: Copper amine oxidase N-terminal domain; Fibronectin type III domain YP_007943564.1 PFAM: Oxidoreductase molybdopterin binding domain YP_007943565.1 PFAM: Oxidoreductase molybdopterin binding domain; FMN-binding domain YP_007943566.1 PFAM: FMN-binding domain YP_007943567.1 PFAM: ABC-type cobalt transport system, permease component YP_007943568.1 PFAM: Oxidoreductase molybdopterin binding domain YP_007943569.1 PFAM: ABC transporter YP_007943570.1 PFAM: ABC transporter YP_007943571.1 PFAM: Cobalt transport protein YP_007943572.1 PFAM: Protein of unknown function (DUF1312) YP_007943573.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_007943574.1 PFAM: Phosphotransferase enzyme family YP_007943575.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_007943576.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_007943577.1 PFAM: Helix-turn-helix YP_007943578.1 PFAM: Shikimate / quinate 5-dehydrogenase YP_007943579.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_007943580.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_007943581.1 PFAM: Heptaprenyl diphosphate synthase component I YP_007943582.1 PFAM: ApbE family YP_007943583.1 PFAM: Copper amine oxidase N-terminal domain; FMN-binding domain YP_007943584.1 PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR) YP_007943585.1 PFAM: UvrB/uvrC motif YP_007943586.1 PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain YP_007943587.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif YP_007943588.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_007943589.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region YP_007943591.1 PFAM: CarD-like/TRCF domain YP_007943592.1 PFAM: TRAM domain; PIN domain YP_007943593.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_007943594.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_007943595.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_007943596.1 PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_007943597.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_007943598.1 PFAM: RNase3 domain YP_007943599.1 PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent YP_007943600.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_007943601.1 PFAM: Protein of unknown function (DUF901) YP_007943602.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor YP_007943603.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_007943604.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; manually curated YP_007943605.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_007943606.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_007943607.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_007943608.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_007943609.1 PFAM: Ribosomal protein L10 YP_007943610.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_007943611.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_007943612.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta'' subunit; DNA-directed RNA polymerase, beta' subunit, predominant form YP_007943613.1 PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family YP_007943614.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_007943615.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_007943616.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007943617.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_007943618.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_007943619.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_007943620.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_007943621.1 PFAM: Ribosomal protein L23 YP_007943622.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_007943623.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_007943624.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_007943625.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_007943626.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_007943627.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_007943628.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_007943629.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_007943630.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_007943631.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_007943632.1 PFAM: Ribosomal protein S14p/S29e YP_007943633.1 PFAM: Ribosomal protein S8 YP_007943634.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_007943635.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_007943636.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_007943637.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_007943638.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_007943639.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_007943640.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; manually curated YP_007943642.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_007943643.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; manually curated YP_007943644.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_007943645.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_007943646.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_007943647.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_007943648.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_007943649.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit YP_007943650.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal YP_007943651.1 PFAM: Cobalt transport protein YP_007943652.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_007943653.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_007943654.1 PFAM: Ribosomal protein S9/S16 YP_007943655.1 PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_007943656.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007943657.1 PFAM: SNARE associated Golgi protein YP_007943658.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_007943659.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; manually curated YP_007943660.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007943661.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007943662.1 PFAM: LysE type translocator YP_007943663.1 PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family YP_007943664.1 PFAM: Radical SAM superfamily YP_007943665.1 PFAM: Sir2 family YP_007943666.1 PFAM: DEAD/DEAH box helicase YP_007943667.1 PFAM: Helicase conserved C-terminal domain; DSHCT (NUC185) domain YP_007943668.1 PFAM: Protein of unknown function (DUF441) YP_007943669.1 PFAM: Nucleotidyltransferase domain YP_007943670.1 PFAM: Protein of unknown function DUF86 YP_007943672.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, beta subunit YP_007943673.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit YP_007943674.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007943675.1 PFAM: Periplasmic binding protein YP_007943676.1 PFAM: Domain of unknown function (DUF364); MoeA C-terminal region (domain IV) YP_007943677.1 PFAM: PemK-like protein YP_007943678.1 PFAM: SpoVT / AbrB like domain YP_007943679.1 PFAM: Transcriptional regulator PadR-like family; TIGRFAM: transcriptional regulator, Acidobacterial, PadR-family YP_007943680.1 PFAM: Cell cycle protein YP_007943682.1 PFAM: Copper amine oxidase N-terminal domain YP_007943683.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007943687.1 PFAM: Transposase, Mutator family; manually curated YP_007943689.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007943695.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007943696.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein YP_007943697.1 PFAM: MarR family YP_007943698.1 PFAM: 4Fe-4S binding domain YP_007943699.1 PFAM: Inositol monophosphatase family YP_007943700.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_007943702.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_007943703.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_007943704.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_007943705.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_007943706.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_007943707.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_007943708.1 PFAM: Bacterial regulatory proteins, tetR family YP_007943709.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_007943710.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007943711.1 PFAM: short chain dehydrogenase YP_007943712.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007943713.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_007943714.1 PFAM: AMP-binding enzyme YP_007943716.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; DUF35 OB-fold domain YP_007943717.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_007943718.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007943719.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007943720.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007943721.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007943722.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007943723.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007943724.1 PFAM: Amidohydrolase YP_007943725.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007943727.1 PFAM: Cysteine-rich domain YP_007943728.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_007943729.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Contains selenocysteine; manually curated YP_007943730.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain; Contains selenocysteine; manually curated YP_007943732.1 PFAM: Nitroreductase family YP_007943733.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; manually curated YP_007943735.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007943736.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007943737.1 PFAM: 4Fe-4S binding domain; Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family YP_007943738.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007943739.1 PFAM: AMP-binding enzyme YP_007943740.1 PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase YP_007943742.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_007943744.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007943745.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007943746.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_007943747.1 PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N) YP_007943748.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase YP_007943749.1 PFAM: AMP-binding enzyme YP_007943750.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007943751.1 PFAM: Metallo-beta-lactamase superfamily YP_007943753.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007943754.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, bzd-type, N subunit YP_007943755.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, bzd-type, O subunit YP_007943756.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007943757.1 PFAM: Copper amine oxidase N-terminal domain; Collagen binding domain YP_007943758.1 PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB YP_007943759.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007943760.1 PFAM: Permease family YP_007943761.1 PFAM: Iron-containing alcohol dehydrogenase YP_007943762.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007943763.1 PFAM: Cupin domain; Helix-turn-helix YP_007943764.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; manually curated YP_007943765.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_007943766.1 PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit YP_007943768.1 PFAM: Aminotransferase class I and II YP_007943769.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_007943771.1 PFAM: Protein of unknown function (DUF3680) YP_007943772.1 PFAM: Protein of unknown function (DUF497) YP_007943774.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_007943776.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_007943777.1 PFAM: MerR family regulatory protein YP_007943779.1 PFAM: YcfA-like protein YP_007943780.1 PFAM: HicB family; Uncharacterised protein family (UPF0150) YP_007943782.1 PFAM: Phd_YefM YP_007943783.1 PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6 YP_007943785.1 PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family YP_007943786.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/HMARI; CRISPR-associated protein Cas5, N-terminal domain YP_007943787.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD YP_007943788.1 PFAM: Domain of unknown function DUF83 YP_007943789.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP; CRISPR-associated endonuclease Cas1; manually curated; non-canonical start codon YP_007943790.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2 YP_007943792.1 PFAM: Mu transposase, C-terminal; Integrase core domain YP_007943795.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007943796.1 PFAM: Putative transposase YP_007943797.1 PFAM: Transposase, Mutator family YP_007943798.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007943799.1 PFAM: Phage integrase family YP_007943800.1 PFAM: Phage integrase family YP_007943801.1 PFAM: Integrase core domain YP_007943802.1 PFAM: Transposase YP_007943803.1 PFAM: MarR family YP_007943804.1 PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA YP_007943807.1 PFAM: Nucleotidyltransferase domain YP_007943809.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007943810.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007943811.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007943812.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007943814.1 PFAM: Major Facilitator Superfamily YP_007943815.1 PFAM: Peptidase propeptide and YPEB domain YP_007943818.1 PFAM: Helix-turn-helix YP_007943820.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_007943822.1 PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II YP_007943823.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_007943824.1 PFAM: Protein of unknown function (DUF445) YP_007943825.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; branched-chain amino acid aminotransferase, group I YP_007943826.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_007943827.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_007943828.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_007943829.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_007943830.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_007943831.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_007943832.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein YP_007943833.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_007943834.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_007943836.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein YP_007943837.1 TIGRFAM: TIGR00268 family protein YP_007943838.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein YP_007943839.1 PFAM: YbbR-like protein YP_007943840.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007943841.1 PFAM: Calcineurin-like phosphoesterase YP_007943843.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_007943845.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_007943847.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007943848.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007943849.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold YP_007943850.1 PFAM: Transposase, Mutator family YP_007943851.1 PFAM: Bacterial regulatory proteins, tetR family YP_007943853.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase YP_007943856.1 PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: probable dihydroxyacetone kinase regulator YP_007943858.1 PFAM: Radical SAM superfamily YP_007943859.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_007943860.1 PFAM: Protein of unknown function (DUF1113) YP_007943861.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_007943862.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007943863.1 PFAM: GGDEF domain; Phosphoserine phosphatase RsbU, N-terminal domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007943864.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_007943865.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007943866.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_007943867.1 PFAM: STAS domain YP_007943868.1 PFAM: Transposase DDE domain YP_007943869.1 PFAM: Copper amine oxidase N-terminal domain; Rhodanese-like domain YP_007943870.1 PFAM: Phospholipase D Active site motif YP_007943871.1 PFAM: GAF domain; Activator of aromatic catabolism; V4R domain YP_007943872.1 PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain YP_007943873.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_007943874.1 PFAM: short chain dehydrogenase YP_007943875.1 PFAM: short chain dehydrogenase YP_007943876.1 PFAM: CoA-transferase family III YP_007943877.1 PFAM: CoA-transferase family III YP_007943878.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007943879.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007943880.1 PFAM: BssC/TutF protein YP_007943881.1 PFAM: Glycine radical; Pyruvate formate lyase YP_007943884.1 PFAM: 4Fe-4S binding domain; Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family YP_007943885.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_007943886.1 PFAM: von Willebrand factor type A domain YP_007943888.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Propionate catabolism activator; PAS fold YP_007943889.1 PFAM: BssC/TutF protein YP_007943890.1 PFAM: Glycine radical; Pyruvate formate lyase YP_007943892.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_007943893.1 PFAM: von Willebrand factor type A domain YP_007943894.1 PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family YP_007943895.1 PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain YP_007943896.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_007943897.1 PFAM: short chain dehydrogenase YP_007943898.1 PFAM: short chain dehydrogenase YP_007943899.1 PFAM: CoA-transferase family III YP_007943900.1 PFAM: CoA-transferase family III YP_007943901.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007943902.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007943903.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007943904.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain YP_007943905.1 PFAM: Pterin binding enzyme YP_007943906.1 PFAM: B12 binding domain YP_007943907.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_007943909.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_007943911.1 PFAM: Major Facilitator Superfamily YP_007943912.1 PFAM: Protein of unknown function (DUF1638) YP_007943913.1 PFAM: B12 binding domain YP_007943914.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_007943915.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_007943916.1 PFAM: Vitamin B12 dependent methionine synthase, activation domain YP_007943918.1 PFAM: Transposase DDE domain YP_007943919.1 PFAM: Periplasmic binding protein; S-layer homology domain YP_007943920.1 PFAM: Cobalt chelatase (CbiK) YP_007943921.1 PFAM: ABC transporter YP_007943922.1 PFAM: FecCD transport family YP_007943924.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_007943925.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_007943926.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_007943927.1 PFAM: Sulfite exporter TauE/SafE YP_007943928.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_007943929.1 PFAM: Iron-containing alcohol dehydrogenase YP_007943931.1 PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE) YP_007943932.1 PFAM: Domain of unknown function (DUF955) YP_007943933.1 PFAM: Helix-turn-helix YP_007943935.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007943937.1 PFAM: Protein of unknown function (DUF1659) YP_007943938.1 PFAM: Protein of unknown function (DUF2922) YP_007943940.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Sporulation related domain YP_007943941.1 PFAM: Subtilase family YP_007943942.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_007943943.1 PFAM: Metallo-beta-lactamase superfamily YP_007943944.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_007943945.1 PFAM: Carboxymuconolactone decarboxylase family YP_007943946.1 PFAM: Copper amine oxidase N-terminal domain YP_007943947.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007943949.1 PFAM: V4R domain YP_007943950.1 PFAM: KaiC YP_007943951.1 PFAM: KaiC YP_007943955.1 PFAM: Multicopper oxidase YP_007943956.1 PFAM: Multicopper oxidase YP_007943957.1 PFAM: Multicopper oxidase YP_007943958.1 PFAM: Protein of unknown function DUF89 YP_007943960.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007943961.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007943962.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_007943965.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM YP_007943966.1 PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ YP_007943967.1 PFAM: ABC transporter YP_007943969.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_007943971.1 PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase YP_007943973.1 PFAM: Dehydrogenase E1 component YP_007943974.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_007943975.1 PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; molybdenum cofactor synthesis domain YP_007943976.1 PFAM: Transposase IS200 like YP_007943977.1 PFAM: Putative transposase DNA-binding domain; Probable transposase YP_007943978.1 PFAM: Permease family YP_007943980.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase YP_007943981.1 PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus YP_007943982.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_007943983.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit YP_007943984.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007943985.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_007943986.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007943987.1 PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain; TIGRFAM: cobaltochelatase subunit YP_007943988.1 PFAM: Magnesium chelatase, subunit ChlI YP_007943989.1 PFAM: MarR family YP_007943996.1 PFAM: Domain of unknown function (DUF1987) YP_007943997.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_007943998.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_007944000.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain YP_007944003.1 PFAM: CAAX amino terminal protease family YP_007944004.1 PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18 YP_007944006.1 PFAM: Copper amine oxidase N-terminal domain; Protein of unknown function (DUF1343) YP_007944008.1 PFAM: 'Cold-shock' DNA-binding domain YP_007944009.1 PFAM: AIG2-like family YP_007944010.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_007944011.1 PFAM: Permease family YP_007944015.1 PFAM: HPP family YP_007944016.1 PFAM: Cupin domain YP_007944017.1 PFAM: Uncharacterised BCR, COG1937 YP_007944018.1 PFAM: SirA-like protein YP_007944019.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit YP_007944020.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain YP_007944021.1 PFAM: FAD binding domain YP_007944024.1 PFAM: Cysteine-rich domain YP_007944025.1 PFAM: DsrE/DsrF-like family YP_007944026.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_007944027.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: ybaK/ebsC protein YP_007944028.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007944029.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_007944030.1 PFAM: Phd_YefM YP_007944031.1 PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6 YP_007944034.1 PFAM: CRISPR-associated protein TM1802 (cas_TM1802); TIGRFAM: CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI; CRISPR-associated protein, TM1802 family YP_007944035.1 PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI YP_007944036.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/HMARI; CRISPR-associated protein Cas5, N-terminal domain YP_007944037.1 PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD YP_007944038.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4 YP_007944039.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP; CRISPR-associated endonuclease Cas1 YP_007944040.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; manually curated; non-canonical start codon YP_007944042.1 PFAM: Predicted transporter (DUF2162) YP_007944043.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007944044.1 PFAM: Uncharacterized conserved protein (DUF2149) YP_007944045.1 PFAM: CobN/Magnesium Chelatase YP_007944046.1 PFAM: Transposase, Mutator family YP_007944047.1 PFAM: Transposase DDE domain YP_007944049.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007944050.1 PFAM: Methyltransferase domain YP_007944051.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nickel ABC transporter, permease subunit NikB YP_007944052.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nickel ABC transporter, permease subunit NikC YP_007944053.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007944054.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; manually curated YP_007944055.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: methyltransferase, FkbM family YP_007944056.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007944057.1 PFAM: Methyltransferase domain YP_007944058.1 PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family YP_007944059.1 PFAM: Plasmid encoded toxin Txe YP_007944060.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007944061.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007944063.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325) YP_007944064.1 TIGRFAM: putative toxin-antitoxin system toxin component, PIN family YP_007944065.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007944069.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007944072.1 PFAM: MarR family YP_007944073.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_007944074.1 PFAM: ABC transporter; TOBE domain YP_007944075.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944076.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: tungstate ABC transporter binding protein WtpA YP_007944077.1 PFAM: ABC transporter YP_007944078.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944079.1 PFAM: NMT1/THI5 like YP_007944080.1 PFAM: Domain of unknown function (DUF364) YP_007944081.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_007944082.1 PFAM: Nitrogen regulatory protein P-II YP_007944083.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_007944084.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; manually curated; non-canonical start codon YP_007944085.1 PFAM: Small Multidrug Resistance protein YP_007944086.1 PFAM: Transposase IS200 like; manually curated YP_007944087.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase YP_007944088.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_007944089.1 PFAM: Thiazole biosynthesis protein ThiG YP_007944090.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH YP_007944091.1 PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2 YP_007944092.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_007944093.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_007944096.1 PFAM: HicB family; Uncharacterised protein family (UPF0150) YP_007944097.1 PFAM: YcfA-like protein YP_007944098.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_007944099.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_007944100.1 PFAM: Peptidase family M48 YP_007944101.1 PFAM: Transcription elongation factor, GreA/GreB, C-term YP_007944102.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_007944103.1 PFAM: short chain dehydrogenase YP_007944104.1 PFAM: Cupin domain YP_007944106.1 PFAM: HlyD family secretion protein YP_007944107.1 PFAM: ABC transporter YP_007944108.1 PFAM: ABC transporter YP_007944109.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_007944110.1 PFAM: Bacterial regulatory proteins, tetR family YP_007944111.1 PFAM: Coat F domain YP_007944113.1 PFAM: alpha/beta hydrolase fold YP_007944114.1 PFAM: Putative peptidoglycan binding domain; Glycosyl hydrolases family 18 YP_007944117.1 PFAM: AIR carboxylase YP_007944118.1 PFAM: XcyI restriction endonuclease YP_007944119.1 PFAM: DNA methylase YP_007944120.1 PFAM: Mechanosensitive ion channel YP_007944121.1 PFAM: Putative phospholipid-binding domain YP_007944122.1 PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase YP_007944124.1 PFAM: Cysteine-rich domain YP_007944125.1 PFAM: Rubrerythrin YP_007944127.1 PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein YP_007944128.1 PFAM: CBS domain; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944130.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit YP_007944131.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944132.1 PFAM: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family YP_007944134.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon YP_007944135.1 PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family YP_007944137.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007944138.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944139.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944140.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007944142.1 PFAM: Biotin and Thiamin Synthesis associated domain; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydG; thiazole biosynthesis protein ThiH YP_007944143.1 PFAM: Radical SAM superfamily; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydE YP_007944144.1 PFAM: GTPase of unknown function; TIGRFAM: hydrogenase maturation GTPase HydF; small GTP-binding protein domain YP_007944145.1 TIGRFAM: putative iron-only hydrogenase system regulator YP_007944146.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_007944147.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_007944148.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only YP_007944150.1 PFAM: Polysulphide reductase, NrfD YP_007944151.1 PFAM: NPCBM/NEW2 domain YP_007944153.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007944154.1 PFAM: Biotin-requiring enzyme YP_007944155.1 PFAM: Carboxyl transferase domain YP_007944156.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007944157.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster YP_007944158.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007944159.1 PFAM: DRTGG domain; manually curated; non-canonical start codon YP_007944160.1 PFAM: Nitrous oxide-stimulated promoter YP_007944161.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944163.1 PFAM: Accessory gene regulator B YP_007944165.1 PFAM: Bacterial stress protein YP_007944166.1 PFAM: Tellurium resistance protein; Bacterial stress protein YP_007944167.1 PFAM: Bacterial stress protein YP_007944168.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YkoY family YP_007944170.1 PFAM: Protein of unknown function (DUF3706) YP_007944171.1 PFAM: Protein of unknown function (DUF2983) YP_007944173.1 PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein YP_007944174.1 PFAM: Tellurium resistance protein; Bacterial stress protein YP_007944176.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_007944177.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_007944179.1 PFAM: Citrate transporter YP_007944180.1 PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes YP_007944182.1 PFAM: Toxic anion resistance protein (TelA) YP_007944183.1 PFAM: Protein of unknown function C-terminus (DUF2399); Protein of unknown function N-terminus (DUF3323); TIGRFAM: TIGR02679 family protein YP_007944184.1 TIGRFAM: TIGR02680 family protein YP_007944185.1 PFAM: Protein of unknown function (DUF2398); TIGRFAM: TIGR02678 family protein YP_007944186.1 PFAM: Protein of unknown function (DUF2397); TIGRFAM: TIGR02677 family protein YP_007944187.1 PFAM: Nucleotidyltransferase domain YP_007944190.1 PFAM: Fic/DOC family YP_007944191.1 PFAM: HEPN domain YP_007944192.1 PFAM: Nucleotidyltransferase domain YP_007944194.1 PFAM: VTC domain YP_007944196.1 PFAM: CotH protein YP_007944197.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007944198.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007944199.1 PFAM: Peptidase family S58 YP_007944200.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_007944201.1 PFAM: Nitrogen regulatory protein P-II YP_007944206.1 PFAM: Protein of unknown function (DUF541) YP_007944208.1 PFAM: Protein of unknown function (DUF867) YP_007944209.1 PFAM: D-ala-D-ala dipeptidase YP_007944210.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007944211.1 PFAM: Putative transposase DNA-binding domain YP_007944213.1 PFAM: Copper amine oxidase N-terminal domain YP_007944215.1 PFAM: Iron-containing alcohol dehydrogenase YP_007944216.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944217.1 PFAM: Uncharacterised protein family (UPF0158) YP_007944218.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3387); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_007944220.1 PFAM: Type I restriction modification DNA specificity domain YP_007944221.1 PFAM: KilA-N domain YP_007944222.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM) YP_007944225.1 PFAM: DNA alkylation repair enzyme YP_007944227.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007944228.1 PFAM: alpha/beta hydrolase fold YP_007944229.1 PFAM: Bacterial regulatory proteins, tetR family YP_007944230.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_007944231.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007944232.1 PFAM: Transposase IS200 like YP_007944233.1 PFAM: Putative transposase DNA-binding domain; Probable transposase YP_007944235.1 PFAM: Retroviral aspartyl protease YP_007944236.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007944237.1 PFAM: Methyltransferase domain YP_007944240.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_007944241.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007944242.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_007944243.1 PFAM: Protein of unknown function DUF72 YP_007944244.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_007944246.1 PFAM: WD40-like Beta Propeller Repeat YP_007944249.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007944250.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007944251.1 PFAM: ABC transporter YP_007944258.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007944259.1 PFAM: PIN domain YP_007944260.1 PFAM: Plasmid stabilisation system protein YP_007944262.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase YP_007944263.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase YP_007944264.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; manually curated YP_007944266.1 PFAM: CAAX amino terminal protease family YP_007944270.1 PFAM: Calcium/calmodulin dependent protein kinase II Association YP_007944271.1 PFAM: Transposase domain (DUF772) YP_007944272.1 PFAM: Protein of unknown function (DUF2837); manually curated YP_007944274.1 PFAM: NADPH-dependent FMN reductase YP_007944275.1 PFAM: Protein of unknown function (DUF3231) YP_007944276.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007944277.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007944282.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007944283.1 PFAM: Plasmid stabilisation system protein YP_007944285.1 PFAM: Protein kinase domain YP_007944286.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007944287.1 PFAM: AcrB/AcrD/AcrF family YP_007944288.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_007944289.1 PFAM: Radical SAM superfamily; B12 binding domain YP_007944290.1 PFAM: Radical SAM superfamily YP_007944291.1 PFAM: Acetyltransferase (GNAT) family YP_007944292.1 PFAM: PIN domain YP_007944293.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007944294.1 PFAM: Major Facilitator Superfamily; Bacterial protein of unknown function (DUF894) YP_007944295.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_007944296.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_007944297.1 PFAM: alpha/beta hydrolase fold YP_007944298.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007944299.1 PFAM: PIN domain YP_007944302.1 PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats YP_007944304.1 PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain YP_007944305.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_007944309.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase YP_007944310.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007944312.1 PFAM: Cysteine-rich domain YP_007944313.1 PFAM: FAD binding domain; FAD dependent oxidoreductase YP_007944314.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Bacterial regulatory protein, arsR family; Contains selenocysteine; manually curated YP_007944315.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007944316.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_007944317.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_007944318.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944319.1 PFAM: PAS fold YP_007944320.1 PFAM: Polysulphide reductase, NrfD YP_007944321.1 PFAM: 4Fe-4S binding domain YP_007944322.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007944323.1 PFAM: Amidohydrolase family YP_007944324.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944326.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family YP_007944327.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007944328.1 PFAM: domain; Transketolase, C-terminal domain YP_007944329.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007944331.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007944332.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007944333.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_007944334.1 PFAM: Hydantoinase B/oxoprolinase YP_007944335.1 PFAM: AMP-binding enzyme YP_007944336.1 PFAM: MaoC like domain YP_007944337.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_007944338.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944339.1 PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain YP_007944340.1 PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_007944341.1 PFAM: AMP-binding enzyme YP_007944343.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_007944344.1 PFAM: Hydantoinase B/oxoprolinase YP_007944345.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007944346.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007944347.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_007944348.1 PFAM: MaoC like domain YP_007944349.1 PFAM: short chain dehydrogenase YP_007944350.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_007944351.1 PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain YP_007944352.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007944353.1 PFAM: Ferrous iron transport protein B C terminus; Nucleoside recognition YP_007944354.1 PFAM: Ferrous iron transport protein B YP_007944355.1 PFAM: FeoA domain YP_007944356.1 PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_007944357.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007944358.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007944359.1 PFAM: CBS domain YP_007944360.1 PFAM: Sporulation and spore germination YP_007944361.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007944362.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007944363.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit YP_007944364.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit YP_007944365.1 PFAM: Nickel-dependent hydrogenase; Contains selenocysteine; manually curated YP_007944366.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease YP_007944367.1 PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA YP_007944368.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB YP_007944370.1 PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF YP_007944371.1 PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD YP_007944372.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE YP_007944373.1 PFAM: Copper amine oxidase N-terminal domain; D-alanyl-D-alanine carboxypeptidase YP_007944374.1 PFAM: CBS domain YP_007944375.1 PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF YP_007944376.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_007944377.1 PFAM: AhpC/TSA family YP_007944380.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_007944382.1 PFAM: CGGC domain YP_007944383.1 PFAM: CGGC domain YP_007944384.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_007944385.1 PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit YP_007944387.1 PFAM: Protein of unknown function (DUF503) YP_007944392.1 PFAM: Major Facilitator Superfamily YP_007944393.1 PFAM: Uncharacterised protein family (UPF0153) YP_007944396.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_007944397.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_007944398.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_007944399.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_007944400.1 PFAM: Chaperonin 10 Kd subunit YP_007944401.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_007944403.1 PFAM: Helix-turn-helix YP_007944404.1 PFAM: Putative inner membrane protein (DUF1819) YP_007944405.1 PFAM: Domain of unknown function (DUF1788) YP_007944407.1 PFAM: N-6 DNA Methylase; Eco57I restriction endonuclease YP_007944408.1 PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family YP_007944409.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family YP_007944410.1 PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein YP_007944411.1 TIGRFAM: YgiT-type zinc finger domain YP_007944412.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; manually curated YP_007944413.1 PFAM: EamA-like transporter family; manually curated YP_007944414.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_007944415.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B YP_007944416.1 PFAM: ABC transporter YP_007944418.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_007944420.1 PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase YP_007944421.1 PFAM: Transposase domain (DUF772) YP_007944422.1 PFAM: Helix-turn-helix YP_007944424.1 PFAM: Putative small multi-drug export protein YP_007944426.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA) YP_007944427.1 PFAM: Nickel-dependent hydrogenase YP_007944429.1 PFAM: Trypsin YP_007944430.1 PFAM: Sodium/calcium exchanger protein YP_007944431.1 PFAM: MerR, DNA binding; MerR family regulatory protein YP_007944432.1 PFAM: Peptidase family M48 YP_007944433.1 PFAM: SNARE associated Golgi protein YP_007944434.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_007944435.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007944436.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_007944437.1 PFAM: Penicillinase repressor YP_007944438.1 PFAM: BlaR1 peptidase M56 YP_007944439.1 PFAM: Bacterial mobilisation protein (MobC) YP_007944441.1 PFAM: Acetyltransferase (GNAT) family YP_007944442.1 PFAM: Acetyltransferase (GNAT) family YP_007944443.1 PFAM: Acetyltransferase (GNAT) family YP_007944444.1 PFAM: Nucleotidyltransferase domain YP_007944446.1 PFAM: Domain of unknown function (DUF1814) YP_007944450.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007944452.1 PFAM: NifU-like domain; Contains selenocysteine; manually curated YP_007944453.1 PFAM: Carbon-nitrogen hydrolase YP_007944454.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_007944455.1 PFAM: Copper amine oxidase N-terminal domain; L,D-transpeptidase catalytic domain YP_007944457.1 PFAM: Coat F domain YP_007944458.1 PFAM: FAD dependent oxidoreductase YP_007944459.1 PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV YP_007944460.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_007944461.1 PFAM: ABC transporter YP_007944462.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_007944463.1 PFAM: Calcineurin-like phosphoesterase YP_007944464.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_007944465.1 PFAM: 2-nitropropane dioxygenase YP_007944467.1 PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_007944468.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007944469.1 PFAM: Cyclic nucleotide-binding domain YP_007944471.1 PFAM: Sulfite exporter TauE/SafE YP_007944472.1 PFAM: Universal stress protein family YP_007944473.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_007944474.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_007944475.1 PFAM: Protein of unknown function (DUF1694) YP_007944476.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_007944477.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_007944478.1 PFAM: YeeE/YedE family (DUF395) YP_007944479.1 PFAM: SirA-like protein YP_007944480.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_007944481.1 PFAM: SLBB domain; Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_007944482.1 PFAM: Uncharacterised ArCR, COG2043 YP_007944483.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_007944484.1 PFAM: Uncharacterized ACR (DUF711) YP_007944485.1 PFAM: ACT domain YP_007944486.1 PFAM: Putative cyclase YP_007944488.1 PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein YP_007944489.1 PFAM: Citrate transporter YP_007944490.1 PFAM: Transposase DDE domain; manually curated YP_007944491.1 PFAM: ThiS family YP_007944492.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_007944493.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944494.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_007944495.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_007944496.1 PFAM: MOSC domain YP_007944497.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_007944498.1 PFAM: MoeZ/MoeB domain; ThiF family YP_007944499.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_007944500.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_007944501.1 PFAM: Membrane protein of unknown function YP_007944502.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P YP_007944504.1 PFAM: Putative Fe-S cluster YP_007944505.1 PFAM: Protein of unknown function (DUF3006) YP_007944506.1 PFAM: Metallo-beta-lactamase superfamily YP_007944507.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_007944508.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_007944509.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_007944510.1 PFAM: GrpE YP_007944511.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_007944512.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_007944513.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_007944514.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_007944515.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family YP_007944516.1 PFAM: HIT domain YP_007944517.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_007944519.1 PFAM: NfeD-like YP_007944520.1 PFAM: SigmaW regulon antibacterial YP_007944522.1 PFAM: Citrate transporter YP_007944523.1 PFAM: Coenzyme A transferase YP_007944524.1 PFAM: Coenzyme A transferase YP_007944525.1 PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF YP_007944526.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; Contains selenocysteine; manually curated YP_007944528.1 PFAM: YabP family; TIGRFAM: sporulation protein YqfC YP_007944529.1 PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD YP_007944530.1 PFAM: PhoH-like protein YP_007944531.1 PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG YP_007944532.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_007944533.1 PFAM: Prokaryotic diacylglycerol kinase; manually curated YP_007944534.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_007944535.1 PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_007944536.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_007944537.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007944538.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007944540.1 PFAM: HlyD family secretion protein YP_007944541.1 PFAM: ABC transporter; manually curated YP_007944542.1 PFAM: Predicted permease YP_007944543.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_007944545.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_007944546.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_007944547.1 PFAM: HTH domain; CBS domain YP_007944548.1 PFAM: Domain of unknown function (DUF299) YP_007944549.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase YP_007944550.1 PFAM: Pyridoxamine 5'-phosphate oxidase; manually curated YP_007944551.1 PFAM: Small Multidrug Resistance protein; manually curated YP_007944552.1 PFAM: Helix-turn-helix YP_007944553.1 PFAM: C4-dicarboxylate anaerobic carrier YP_007944554.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_007944555.1 PFAM: NADPH-dependent FMN reductase YP_007944556.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_007944557.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core YP_007944558.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_007944559.1 PFAM: Protein of unknown function (DUF421) YP_007944560.1 PFAM: Protein of unknown function (DUF1657) YP_007944561.1 PFAM: Protein of unknown function (DUF1657) YP_007944562.1 PFAM: Protein of unknown function (DUF421); Protein of unknown function (DUF1657) YP_007944563.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC YP_007944564.1 PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD YP_007944565.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE YP_007944566.1 PFAM: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) YP_007944567.1 PFAM: NADPH-dependent FMN reductase YP_007944569.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_007944570.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007944571.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007944572.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA) YP_007944573.1 PFAM: Nickel-dependent hydrogenase YP_007944574.1 PFAM: YKOF-related Family YP_007944575.1 PFAM: L,D-transpeptidase catalytic domain YP_007944576.1 PFAM: Ferritin-like domain YP_007944577.1 PFAM: Prokaryotic cytochrome b561; TIGRFAM: formate dehydrogenase, gamma subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit YP_007944578.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease YP_007944579.1 PFAM: Universal stress protein family YP_007944580.1 PFAM: Family of unknown function (DUF633) YP_007944581.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_007944582.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007944583.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain YP_007944584.1 PFAM: Activator of aromatic catabolism; V4R domain YP_007944585.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007944586.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, subunit C YP_007944587.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_007944588.1 PFAM: domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_007944589.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit YP_007944590.1 PFAM: AMP-binding enzyme YP_007944592.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_007944593.1 PFAM: AMP-binding enzyme YP_007944594.1 PFAM: Acetyltransferase (GNAT) family YP_007944596.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007944597.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007944598.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_007944599.1 PFAM: Major Facilitator Superfamily YP_007944600.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007944601.1 PFAM: AMP-binding enzyme YP_007944602.1 TIGRFAM: MoaD family protein, archaeal YP_007944603.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_007944604.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; benzoyl-CoA reductase, bzd-type, Q subunit YP_007944606.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_007944607.1 PFAM: AMP-binding enzyme; TIGRFAM: benzoate-CoA ligase family YP_007944608.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944609.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_007944610.1 PFAM: Metallo-beta-lactamase superfamily YP_007944612.1 PFAM: NUDIX domain YP_007944613.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007944614.1 PFAM: TFIIE alpha subunit YP_007944615.1 PFAM: Cysteine-rich domain YP_007944617.1 PFAM: Acetyltransferase (GNAT) family YP_007944618.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007944619.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007944621.1 PFAM: Sulfite exporter TauE/SafE YP_007944624.1 PFAM: CBS domain YP_007944626.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_007944627.1 PFAM: Uncharacterized protein containing a ferredoxin domain (DUF2148) YP_007944628.1 PFAM: FMN-dependent dehydrogenase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2 YP_007944629.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_007944630.1 PFAM: Pyruvate kinase, alpha/beta domain YP_007944631.1 PFAM: Beta-lactamase YP_007944633.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_007944635.1 PFAM: DNA topoisomerase YP_007944636.1 PFAM: Fic/DOC family; manually curated YP_007944638.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_007944641.1 manually curated YP_007944642.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_007944645.1 PFAM: Transposase domain (DUF772) YP_007944646.1 PFAM: DNA methylase YP_007944647.1 PFAM: Type III restriction enzyme, res subunit YP_007944648.1 PFAM: HD domain YP_007944649.1 manually curated; non-canonical start codon YP_007944650.1 PFAM: UvrD/REP helicase YP_007944651.1 PFAM: Domain of unknown function DUF87 YP_007944653.1 PFAM: IstB-like ATP binding protein YP_007944654.1 PFAM: Integrase core domain YP_007944656.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007944658.1 PFAM: Iron-containing alcohol dehydrogenase YP_007944659.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_007944660.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007944661.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007944662.1 PFAM: Protein of unknown function (DUF3231) YP_007944663.1 PFAM: GMC oxidoreductase YP_007944665.1 PFAM: Protein of unknown function (DUF820) YP_007944666.1 PFAM: Aminotransferase class I and II YP_007944667.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_007944668.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_007944669.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain YP_007944670.1 PFAM: Cyclic nucleotide-binding domain YP_007944671.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007944672.1 PFAM: domain; FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit YP_007944673.1 PFAM: 4Fe-4S binding domain; TIGRFAM: adenosine phosphosulphate reductase, beta subunit YP_007944674.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_007944675.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007944677.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007944678.1 PFAM: Accessory gene regulator B YP_007944680.1 PFAM: HAMP domain YP_007944681.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_007944682.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; Contains selenocysteine; manually curated YP_007944684.1 PFAM: Polysulphide reductase, NrfD YP_007944685.1 PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE YP_007944686.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_007944687.1 PFAM: His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box YP_007944691.1 PFAM: Sodium:neurotransmitter symporter family; manually curated YP_007944693.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_007944694.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_007944695.1 PFAM: Protein of unknown function (DUF1616); Predicted membrane protein (DUF2206) YP_007944696.1 PFAM: CAAX amino terminal protease family YP_007944697.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007944698.1 PFAM: Accessory gene regulator B YP_007944700.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007944703.1 PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family YP_007944704.1 PFAM: Glycosyl transferase family 2 YP_007944705.1 PFAM: Glycosyl transferases group 1 YP_007944706.1 PFAM: Glycosyl transferases group 1 YP_007944707.1 PFAM: Sulfotransferase domain YP_007944708.1 PFAM: Glycosyl transferases group 1 YP_007944710.1 PFAM: Sulfotransferase domain YP_007944711.1 PFAM: Polysaccharide biosynthesis protein YP_007944712.1 PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK) YP_007944713.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007944714.1 PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457) YP_007944715.1 PFAM: PHP domain YP_007944716.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_007944717.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_007944718.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_007944719.1 PFAM: Predicted permease YP_007944720.1 PFAM: ABC transporter YP_007944721.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_007944723.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007944724.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold YP_007944725.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_007944726.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_007944727.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_007944728.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA YP_007944729.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein YP_007944730.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T YP_007944731.1 PFAM: Putative cyclase YP_007944732.1 PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_007944733.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating); 6-phosphogluconate dehydrogenase, decarboxylating YP_007944734.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type YP_007944735.1 PFAM: Manganese containing catalase YP_007944737.1 PFAM: Sodium:solute symporter family YP_007944738.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; Bacterial SNF2 helicase associated; SWIM zinc finger YP_007944740.1 PFAM: Domain of unknown function (DUF2520); Rossmann-like domain YP_007944741.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain YP_007944742.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944743.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_007944744.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_007944745.1 PFAM: Conserved region in glutamate synthase YP_007944746.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit YP_007944747.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007944748.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007944749.1 PFAM: Family of unknown function (DUF438); Hemerythrin HHE cation binding domain; PAS fold YP_007944751.1 PFAM: Phosphoribosyl transferase domain YP_007944752.1 PFAM: Uncharacterised protein family (UPF0180) YP_007944753.1 PFAM: MarR family YP_007944754.1 PFAM: MYM-type Zinc finger with FCS sequence motif YP_007944755.1 PFAM: Beta propeller domain YP_007944756.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944759.1 PFAM: Cysteine-rich domain YP_007944760.1 PFAM: FAD dependent oxidoreductase YP_007944761.1 PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain YP_007944762.1 PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain YP_007944763.1 PFAM: Protein of unknown function (DUF3231) YP_007944764.1 PFAM: Protein of unknown function (DUF3231) YP_007944766.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_007944767.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944768.1 PFAM: ABC transporter YP_007944769.1 PFAM: Domain of unknown function (DUF364) YP_007944770.1 PFAM: Sulfite exporter TauE/SafE YP_007944771.1 PFAM: Uncharacterised protein family (UPF0175) YP_007944773.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_007944774.1 PFAM: Exonuclease YP_007944776.1 PFAM: Nuclease-related domain YP_007944777.1 PFAM: Protein of unknown function (DUF1696) YP_007944780.1 PFAM: IstB-like ATP binding protein YP_007944783.1 PFAM: Transglycosylase SLT domain YP_007944784.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_007944785.1 PFAM: Domain of unknown function DUF; TIGRFAM: putative sporulation protein YtaF YP_007944786.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_007944787.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I YP_007944788.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007944790.1 PFAM: SNARE associated Golgi protein YP_007944791.1 PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB YP_007944792.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007944793.1 PFAM: Aldo/keto reductase family YP_007944803.1 PFAM: Helix-turn-helix YP_007944804.1 PFAM: Helix-turn-helix YP_007944805.1 PFAM: AT hook motif YP_007944807.1 PFAM: Domain of unknown function (DUF955) YP_007944810.1 PFAM: Copper amine oxidase N-terminal domain YP_007944813.1 PFAM: Helix-turn-helix YP_007944814.1 PFAM: HTH domain; Phage DNA packaging protein Nu1 YP_007944818.1 PFAM: Uncharacterised protein family (UPF0150) YP_007944819.1 TIGRFAM: DNA binding domain, excisionase family YP_007944820.1 PFAM: Phage integrase family YP_007944821.1 PFAM: Archaeal ATPase YP_007944822.1 PFAM: Mu transposase, C-terminal; Integrase core domain YP_007944826.1 PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region YP_007944827.1 PFAM: Transposase IS200 like YP_007944828.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_007944832.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; manually curated YP_007944833.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007944835.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007944836.1 PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC YP_007944837.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_007944838.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_007944839.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_007944840.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_007944841.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding YP_007944842.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_007944843.1 PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_007944844.1 PFAM: Cell division protein ZapA YP_007944845.1 PFAM: PHP domain YP_007944846.1 PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_007944847.1 PFAM: NIF3 (NGG1p interacting factor 3) YP_007944848.1 PFAM: Collagenase; Peptidase family U32 YP_007944849.1 PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein YP_007944850.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_007944852.1 PFAM: Sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB YP_007944854.1 PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase YP_007944855.1 TIGRFAM: putative beta-lysine N-acetyltransferase YP_007944856.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain YP_007944858.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose trehalohydrolase YP_007944859.1 PFAM: Glycosyl transferases group 1 YP_007944861.1 PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein YP_007944866.1 PFAM: Plasmid pRiA4b ORF-3-like protein YP_007944867.1 PFAM: MoaE protein; manually curated; non-canonical start codon YP_007944868.1 PFAM: HNH endonuclease YP_007944871.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007944872.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007944873.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_007944874.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944875.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007944876.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007944878.1 PFAM: ABC transporter; TOBE domain YP_007944879.1 PFAM: Bacterial extracellular solute-binding protein YP_007944880.1 PFAM: Copper amine oxidase N-terminal domain YP_007944882.1 PFAM: Putative transposase; manually curated YP_007944883.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_007944884.1 PFAM: Acyltransferase family; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_007944885.1 PFAM: Transposase, Mutator family YP_007944886.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain YP_007944887.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain YP_007944889.1 PFAM: Protein of unknown function (DUF820) YP_007944890.1 PFAM: Bacterial regulatory proteins, tetR family; QacR-like protein, C-terminal region YP_007944891.1 PFAM: alpha/beta hydrolase fold YP_007944892.1 PFAM: Protein of unknown function (DUF418) YP_007944894.1 PFAM: FxsA cytoplasmic membrane protein YP_007944895.1 PFAM: Exopolysaccharide synthesis, ExoD YP_007944897.1 PFAM: MerR family regulatory protein YP_007944898.1 PFAM: Methyltransferase domain YP_007944900.1 PFAM: Transposase IS200 like YP_007944901.1 PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region YP_007944902.1 PFAM: Sodium:neurotransmitter symporter family YP_007944903.1 PFAM: CBS domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007944904.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007944905.1 PFAM: AMP-binding enzyme YP_007944906.1 PFAM: Carboxyl transferase domain YP_007944907.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007944908.1 PFAM: HMGL-like YP_007944909.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase YP_007944910.1 PFAM: NAD synthase; TIGRFAM: NAD+ synthetase YP_007944911.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_007944913.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_007944914.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_007944915.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_007944916.1 PFAM: Uncharacterized BCR, COG1636 YP_007944917.1 PFAM: Protein of unknown function (DUF2905) YP_007944918.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain YP_007944919.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_007944920.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_007944921.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_007944922.1 PFAM: HD domain YP_007944923.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_007944924.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_007944926.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: sporulation protein, yteA family; RNA polymerase-binding protein DksA YP_007944927.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_007944928.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family YP_007944930.1 PFAM: Nickel uptake substrate-specific transmembrane region YP_007944931.1 PFAM: Glutaredoxin YP_007944932.1 PFAM: Metallo-beta-lactamase superfamily YP_007944933.1 PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain YP_007944934.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain YP_007944935.1 PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain YP_007944936.1 PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH YP_007944937.1 PFAM: SpoVR like protein YP_007944938.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_007944939.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; manually curated YP_007944940.1 PFAM: ABC transporter YP_007944941.1 PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_007944942.1 PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain YP_007944943.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain YP_007944944.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_007944945.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_007944946.1 PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase YP_007944947.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC YP_007944948.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_007944949.1 PFAM: AAA domain (Cdc48 subfamily); ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_007944950.1 PFAM: CodY helix-turn-helix domain; CodY GAF-like domain; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY YP_007944951.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_007944952.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_007944953.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_007944954.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_007944955.1 PFAM: 4Fe-4S binding domain YP_007944956.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_007944957.1 PFAM: Cytidylyltransferase family YP_007944958.1 PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI YP_007944959.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_007944961.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_007944962.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_007944963.1 PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_007944964.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_007944965.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA YP_007944966.1 PFAM: Protein of unknown function (DUF448) YP_007944967.1 PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family YP_007944968.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_007944969.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_007944970.1 PFAM: DHH family; DHHA1 domain YP_007944971.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_007944972.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_007944975.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_007944977.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; manually curated YP_007944979.1 PFAM: Polysaccharide deacetylase; TIGRFAM: probable sporulation protein, polysaccharide deacetylase family YP_007944980.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007944981.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007944982.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_007944984.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_007944985.1 PFAM: Serine dehydrogenase proteinase YP_007944987.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_007944988.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit YP_007944989.1 PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit YP_007944990.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_007944991.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_007944992.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_007944993.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_007944994.1 PFAM: Clp protease YP_007944996.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_007944997.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_007944998.1 PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase YP_007945000.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_007945001.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; manually curated YP_007945003.1 PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_007945004.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_007945005.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_007945006.1 PFAM: RecX family YP_007945007.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG YP_007945009.1 TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family YP_007945010.1 PFAM: Stage V sporulation protein S (SpoVS) YP_007945011.1 PFAM: Membrane dipeptidase (Peptidase family M19) YP_007945012.1 PFAM: PHP domain YP_007945013.1 PFAM: Aminotransferase class I and II YP_007945015.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_007945016.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ YP_007945017.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD YP_007945018.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase YP_007945019.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_007945020.1 PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase YP_007945021.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase YP_007945025.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; manually curated; non-canonical start codon YP_007945029.1 PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_007945030.1 PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain YP_007945031.1 PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase YP_007945032.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_007945034.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_007945035.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_007945036.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_007945038.1 PFAM: NUDIX domain YP_007945039.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC YP_007945040.1 PFAM: AMP-binding enzyme YP_007945041.1 PFAM: AMP-binding enzyme YP_007945042.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007945044.1 PFAM: Electron transfer flavoprotein domain YP_007945045.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_007945046.1 PFAM: Cysteine-rich domain YP_007945047.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007945048.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007945049.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007945050.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; manually curated YP_007945051.1 PFAM: Protein of unknown function (DUF964) YP_007945052.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_007945053.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_007945054.1 PFAM: Histone deacetylase domain YP_007945055.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_007945056.1 PFAM: Protein of unknown function (DUF548) YP_007945057.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_007945058.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_007945059.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007945060.1 PFAM: AMP-binding enzyme YP_007945061.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; TIGRFAM: benzoyl-CoA reductase, subunit C YP_007945062.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_007945063.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; Contains selenocysteine; manually curated YP_007945064.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit YP_007945065.1 PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007945067.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_007945068.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K YP_007945069.1 PFAM: Aluminium resistance protein YP_007945070.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007945071.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_007945072.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007945073.1 PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; manually curated YP_007945074.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region YP_007945075.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_007945076.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_007945077.1 PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain YP_007945078.1 PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_007945079.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase YP_007945080.1 PFAM: Carboxyl transferase domain YP_007945081.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent YP_007945082.1 PFAM: HMGL-like; Conserved carboxylase domain YP_007945083.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007945084.1 PFAM: Methyltransferase domain YP_007945085.1 PFAM: short chain dehydrogenase YP_007945086.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_007945087.1 PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N); DUF35 OB-fold domain YP_007945088.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase YP_007945089.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: cyclohexa-1,5-dienecarbonyl-CoA hydratase YP_007945090.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase YP_007945091.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007945093.1 PFAM: Cysteine-rich domain YP_007945094.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_007945095.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain; Contains selenocysteine; manually curated; non-canonical start codon YP_007945096.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain; Contains selenocysteine; manually curated YP_007945097.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007945099.1 PFAM: Cysteine-rich domain YP_007945100.1 PFAM: FAD binding domain; FAD dependent oxidoreductase YP_007945101.1 PFAM: Bacterial regulatory protein, arsR family; Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated YP_007945102.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007945103.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_007945104.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_007945105.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2179) YP_007945106.1 PFAM: Glycosyl transferases group 1 YP_007945108.1 PFAM: Radical SAM superfamily YP_007945109.1 PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase YP_007945110.1 PFAM: alpha/beta hydrolase fold YP_007945112.1 PFAM: Uncharacterised protein family (UPF0182) YP_007945115.1 PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_007945117.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_007945118.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007945119.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B YP_007945120.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_007945122.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_007945123.1 PFAM: Tetratricopeptide repeat YP_007945125.1 TIGRFAM: putative membrane protein, TIGR04086 family; integral membrane protein, TIGR04097 family YP_007945126.1 PFAM: Exonuclease; DEAD_2; DEAD/DEAH box helicase; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DnaQ family exonuclease/DinG family helicase, putative YP_007945128.1 PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase YP_007945129.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_007945130.1 PFAM: Methyltransferase domain YP_007945131.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_007945132.1 PFAM: Carbohydrate binding domain (family 25) YP_007945135.1 PFAM: Protein of unknown function (DUF322) YP_007945136.1 PFAM: Cell Wall Hydrolase; LysM domain YP_007945137.1 PFAM: Precorrin-8X methylmutase YP_007945138.1 PFAM: CbiX YP_007945139.1 PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase YP_007945140.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase YP_007945141.1 PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal YP_007945142.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase YP_007945143.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase YP_007945144.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit YP_007945145.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit YP_007945146.1 PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD YP_007945147.1 PFAM: IstB-like ATP binding protein YP_007945148.1 PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain YP_007945149.1 PFAM: Domain of unknown function (DUF74) YP_007945150.1 PFAM: Methylenetetrahydrofolate reductase YP_007945151.1 PFAM: Methylene-tetrahydrofolate reductase C terminal YP_007945152.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated YP_007945153.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007945154.1 PFAM: Methylenetetrahydrofolate reductase YP_007945155.1 PFAM: Methylene-tetrahydrofolate reductase C terminal YP_007945156.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated YP_007945157.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain; TIGRFAM: putative selenate reductase, YgfK subunit YP_007945158.1 PFAM: Cysteine-rich domain YP_007945159.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_007945161.1 PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus YP_007945162.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated YP_007945163.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain; 4Fe-4S binding domain YP_007945164.1 PFAM: Pterin binding enzyme YP_007945165.1 PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit YP_007945166.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007945167.1 PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit YP_007945168.1 PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit YP_007945169.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_007945170.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007945172.1 PFAM: 4Fe-4S binding domain YP_007945174.1 PFAM: VWA domain containing CoxE-like protein YP_007945176.1 PFAM: AAA domain (dynein-related subfamily) YP_007945177.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme YP_007945178.1 PFAM: CoA binding domain; Putative DNA-binding protein N-terminus YP_007945179.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_007945182.1 PFAM: Radical SAM superfamily; TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ2; radical SAM additional 4Fe4S-binding domain YP_007945183.1 PFAM: Delta-aminolevulinic acid dehydratase YP_007945184.1 PFAM: Radical SAM superfamily; TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ1; radical SAM additional 4Fe4S-binding domain YP_007945185.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase YP_007945186.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_007945187.1 PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_007945188.1 TIGRFAM: siroheme synthase, N-terminal domain YP_007945189.1 PFAM: Polyprenyl synthetase; TIGRFAM: heptaprenyl diphosphate synthase component II YP_007945195.1 PFAM: Predicted permease YP_007945196.1 PFAM: ABC transporter YP_007945197.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007945198.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007945200.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family YP_007945201.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif YP_007945202.1 PFAM: Universal stress protein family YP_007945204.1 PFAM: Restriction endonuclease YP_007945205.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007945206.1 PFAM: Acetyltransferase (GNAT) family YP_007945207.1 PFAM: DJ-1/PfpI family; TIGRFAM: phosphoribosylformylglycinamidine synthase I YP_007945208.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II YP_007945209.1 PFAM: Universal stress protein family YP_007945210.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: xanthine phosphoribosyltransferase YP_007945211.1 PFAM: Branched-chain amino acid transport system / permease component YP_007945212.1 PFAM: Branched-chain amino acid transport system / permease component YP_007945213.1 PFAM: ABC transporter YP_007945214.1 PFAM: Basic membrane protein YP_007945215.1 PFAM: RNase H YP_007945216.1 PFAM: Protein of unknown function (DUF456) YP_007945217.1 PFAM: Uncharacterized ACR, COG1565 YP_007945218.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU YP_007945219.1 PFAM: Selenocysteine synthase N terminal; L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase YP_007945220.1 PFAM: Amidohydrolase family YP_007945221.1 PFAM: TrkA-N domain; TrkA-C domain YP_007945222.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_007945223.1 PFAM: CoA binding domain; ATP-grasp domain YP_007945224.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; menaquinone biosynthesis protein, SCO4550 family YP_007945225.1 PFAM: Putative periplasminc binding protein (DUF178) YP_007945226.1 PFAM: Radical SAM superfamily; TIGRFAM: putative menaquinone biosynthesis protein, SCO4494 family; radical SAM domain protein, CofH subfamily YP_007945227.1 PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase YP_007945228.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; UbiD family decarboxylases YP_007945229.1 PFAM: Polyprenyl synthetase YP_007945230.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Bacillus form YP_007945236.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_007945237.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region YP_007945239.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007945240.1 PFAM: Histidine kinase; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007945241.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_007945242.1 PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_007945245.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; Contains selenocysteine; manually curated YP_007945246.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007945247.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_007945248.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_007945249.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_007945250.1 PFAM: ACT domain YP_007945251.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_007945252.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_007945253.1 PFAM: Sir2 family YP_007945259.1 PFAM: Protein of unknown function (DUF2889) YP_007945261.1 PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) YP_007945262.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ) YP_007945265.1 PFAM: Protein of unknown function (DUF2892) YP_007945266.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_007945269.1 PFAM: Macro domain YP_007945270.1 PFAM: Coat F domain YP_007945271.1 PFAM: FAD binding domain; 4Fe-4S binding domain YP_007945272.1 PFAM: Cysteine-rich domain YP_007945274.1 PFAM: YcfA-like protein YP_007945275.1 PFAM: Uncharacterised protein family (UPF0150) YP_007945276.1 PFAM: Helix-turn-helix YP_007945278.1 PFAM: Domain of Unknown Function (DUF1540) YP_007945279.1 PFAM: HPP family YP_007945284.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_007945285.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family YP_007945286.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_007945287.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_007945288.1 PFAM: Metallo-beta-lactamase superfamily YP_007945289.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; Bacterial SH3 domain YP_007945290.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_007945291.1 PFAM: Sporulation and spore germination YP_007945292.1 PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain YP_007945293.1 PFAM: Amino acid permease YP_007945294.1 PFAM: SCP-2 sterol transfer family YP_007945298.1 PFAM: Acetyltransferase (GNAT) family YP_007945299.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007945300.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase YP_007945303.1 PFAM: Manganese containing catalase YP_007945304.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007945305.1 PFAM: Transposase domain (DUF772) YP_007945306.1 PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN YP_007945307.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM YP_007945308.1 PFAM: Response regulator receiver domain YP_007945309.1 PFAM: CheC-like family YP_007945310.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_007945311.1 PFAM: CheD YP_007945312.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; fagellar hook-basal body proteins YP_007945313.1 PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins YP_007945314.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family YP_007945315.1 PFAM: PilZ domain YP_007945316.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007945317.1 PFAM: SRP54-type protein, GTPase domain YP_007945318.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_007945319.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: type III secretion protein, YscU/HrpY family; flagellar biosynthetic protein FlhB YP_007945320.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_007945321.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: type III secretion protein, HrpO family; flagellar biosynthetic protein FliQ YP_007945322.1 PFAM: FliP family; TIGRFAM: type III secretion apparatus protein, YscR/HrcR family; flagellar biosynthetic protein FliP YP_007945323.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO YP_007945324.1 PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN YP_007945325.1 PFAM: Flagellar basal body-associated protein FliL YP_007945326.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgB YP_007945327.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins YP_007945328.1 PFAM: Protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein YP_007945329.1 PFAM: Flagellar hook capping protein YP_007945330.1 PFAM: Flagellar hook-length control protein FliK YP_007945331.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ YP_007945332.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI YP_007945333.1 PFAM: Flagellar assembly protein FliH YP_007945334.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG YP_007945335.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_007945336.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE YP_007945337.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC YP_007945338.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_007945339.1 PFAM: FlaG protein YP_007945340.1 PFAM: FlgN protein YP_007945341.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS YP_007945342.1 PFAM: FlhB HrpN YscU SpaS Family YP_007945344.1 PFAM: Transglycosylase SLT domain YP_007945345.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007945347.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007945348.1 PFAM: Flagellar hook-associated protein 2 C-terminus YP_007945352.1 PFAM: Protein of unknown function DUF86 YP_007945355.1 PFAM: Transposase IS200 like YP_007945357.1 PFAM: PIN domain YP_007945360.1 PFAM: Nucleotidyltransferase domain YP_007945361.1 PFAM: Protein of unknown function DUF86 YP_007945363.1 TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007945364.1 PFAM: Protein of unknown function (DUF342) YP_007945365.1 PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family YP_007945366.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family YP_007945369.1 TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007945373.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_007945374.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_007945375.1 PFAM: FliW protein YP_007945376.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3 YP_007945377.1 PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK YP_007945378.1 PFAM: FlgN protein YP_007945379.1 PFAM: FlaG protein YP_007945380.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM YP_007945381.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_007945382.1 PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_007945383.1 PFAM: CheW-like domain YP_007945384.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007945385.1 PFAM: OmpA family YP_007945386.1 PFAM: CheW-like domain YP_007945387.1 PFAM: S-layer homology domain YP_007945388.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_007945390.1 PFAM: CBS domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007945391.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_007945392.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007945393.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007945394.1 PFAM: Aminotransferase class IV YP_007945395.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, clade 2; aminodeoxychorismate synthase, component I, bacterial clade YP_007945396.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_007945399.1 PFAM: ABC transporter YP_007945400.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007945401.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007945403.1 PFAM: PIN domain YP_007945404.1 PFAM: Transposase DDE domain YP_007945406.1 PFAM: PIN domain YP_007945409.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_007945410.1 PFAM: Bacterial regulatory protein, arsR family YP_007945411.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007945412.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_007945413.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007945414.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007945415.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_007945416.1 PFAM: Nitroreductase family YP_007945417.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_007945418.1 PFAM: Rubrerythrin YP_007945419.1 PFAM: Ferric uptake regulator family YP_007945422.1 PFAM: AMP-binding enzyme YP_007945423.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007945424.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007945426.1 PFAM: Phosphoenolpyruvate carboxykinase YP_007945427.1 PFAM: Transposase, Mutator family YP_007945428.1 PFAM: NlpC/P60 family YP_007945429.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007945430.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007945431.1 PFAM: Copper amine oxidase N-terminal domain; SCP-2 sterol transfer family YP_007945432.1 PFAM: Calcineurin-like phosphoesterase YP_007945433.1 PFAM: Uncharacterised BCR, COG1937; DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein YP_007945434.1 PFAM: Mur ligase middle domain; TIGRFAM: poly-gamma-glutamate synthase PgsB/CapB YP_007945435.1 TIGRFAM: poly-gamma-glutamate biosynthesis protein PgsC/CapC YP_007945437.1 PFAM: Protein of unknown function (DUF867) YP_007945438.1 PFAM: Protein of unknown function (DUF867) YP_007945440.1 PFAM: ABC transporter YP_007945442.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007945444.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_007945445.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_007945446.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_007945447.1 PFAM: Response regulator receiver domain YP_007945448.1 PFAM: Amidohydrolase family YP_007945449.1 PFAM: Peptidase C26 YP_007945450.1 PFAM: PemK-like protein YP_007945451.1 PFAM: Ribbon-helix-helix protein, copG family YP_007945452.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_007945453.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_007945454.1 PFAM: Response regulator receiver domain; ANTAR domain YP_007945455.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_007945456.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_007945457.1 PFAM: Conserved region in glutamate synthase YP_007945458.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_007945459.1 PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007945460.1 PFAM: Protein of unknown function, DUF255 YP_007945461.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007945462.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_007945464.1 PFAM: GXGXG motif YP_007945465.1 PFAM: Conserved region in glutamate synthase YP_007945466.1 PFAM: Glutamine amidotransferases class-II YP_007945467.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007945469.1 PFAM: HD domain YP_007945470.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_007945471.1 PFAM: Periplasmic binding protein YP_007945472.1 PFAM: ABC transporter YP_007945473.1 PFAM: FecCD transport family YP_007945476.1 PFAM: Carbon-nitrogen hydrolase YP_007945477.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit YP_007945478.1 PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ YP_007945479.1 PFAM: Cobalt transport protein component CbiN; TIGRFAM: cobalt transport protein YP_007945480.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM YP_007945481.1 PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase YP_007945483.1 PFAM: TatD related DNase YP_007945484.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_007945486.1 PFAM: NlpC/P60 family; LysM domain YP_007945490.1 PFAM: HD domain YP_007945492.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases YP_007945493.1 PFAM: AMP-binding enzyme YP_007945494.1 PFAM: Uncharacterised protein family (UPF0261) YP_007945495.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; phenylphosphate carboxylase, beta subunit YP_007945496.1 PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007945497.1 PFAM: PEP-utilising enzyme, mobile domain YP_007945498.1 PFAM: Activator of aromatic catabolism; V4R domain YP_007945499.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_007945500.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD YP_007945501.1 PFAM: Metallo-beta-lactamase superfamily YP_007945502.1 PFAM: Citrate synthase YP_007945503.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-K factor YP_007945504.1 PFAM: Fic/DOC family; DeoR-like helix-turn-helix domain YP_007945505.1 PFAM: Domain of unknown function (DUF1848) YP_007945506.1 PFAM: Bacterial protein of unknown function (DUF939) YP_007945507.1 PFAM: Iron only nitrogenase protein AnfO (AnfO_nitrog); TIGRFAM: Fe-only nitrogenase accessory protein AnfO YP_007945508.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007945509.1 PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB YP_007945510.1 PFAM: Nitrogenase component 1 type Oxidoreductase YP_007945511.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE YP_007945512.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain YP_007945513.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain YP_007945514.1 PFAM: Nitrogen regulatory protein P-II YP_007945515.1 PFAM: Nitrogen regulatory protein P-II YP_007945516.1 PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein YP_007945517.1 PFAM: HMGL-like YP_007945518.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_007945519.1 PFAM: Aminotransferase class-V YP_007945520.1 PFAM: S-layer homology domain YP_007945521.1 PFAM: Domain of unknown function DUF39 YP_007945522.1 PFAM: 4Fe-4S binding domain; NIL domain YP_007945523.1 PFAM: ApbE family YP_007945524.1 PFAM: AMP-binding enzyme YP_007945525.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_007945526.1 PFAM: SNARE associated Golgi protein YP_007945527.1 PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_007945528.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase YP_007945529.1 PFAM: Tryptophan RNA-binding attenuator protein YP_007945530.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_007945531.1 PFAM: Putative methyltransferase YP_007945532.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007945533.1 PFAM: AAA domain (dynein-related subfamily) YP_007945534.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_007945535.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_007945536.1 PFAM: CoA binding domain YP_007945538.1 PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57 YP_007945539.1 PFAM: GPR1/FUN34/yaaH family YP_007945540.1 PFAM: Nucleotidyl transferase; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_007945541.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1 YP_007945542.1 PFAM: Carbohydrate binding domain (family 25) YP_007945543.1 PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV YP_007945544.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_007945545.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_007945546.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_007945547.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase C4 zinc finger domain; TIGRFAM: DNA ligase, NAD-dependent YP_007945548.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA YP_007945549.1 PFAM: Phosphoribosyl-AMP cyclohydrolase YP_007945550.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_007945551.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_007945552.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_007945553.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_007945554.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_007945555.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_007945556.1 PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD YP_007945557.1 PFAM: PIN domain; TIGRFAM: putative toxin-antitoxin system toxin component, PIN family YP_007945558.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007945562.1 PFAM: Transposase, Mutator family YP_007945563.1 PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region YP_007945564.1 PFAM: Transposase IS200 like YP_007945565.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007945566.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007945568.1 PFAM: Accessory gene regulator B YP_007945569.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007945572.1 PFAM: IstB-like ATP binding protein YP_007945577.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_007945578.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_007945579.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_007945580.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_007945581.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_007945582.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_007945583.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase YP_007945584.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_007945587.1 PFAM: Fic/DOC family YP_007945588.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; tRNA methyl transferase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_007945589.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_007945591.1 PFAM: Protein of unknown function (DUF1015); MazG nucleotide pyrophosphohydrolase domain; manually curated YP_007945592.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase YP_007945593.1 PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294 YP_007945594.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_007945595.1 PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase YP_007945597.1 PFAM: ABC transporter YP_007945598.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; NifC-like ABC-type porter YP_007945599.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_007945601.1 TIGRFAM: DNA binding domain, excisionase family YP_007945602.1 PFAM: Domain of unknown function (DUF362) YP_007945603.1 PFAM: LysM domain; Cell Wall Hydrolase YP_007945605.1 PFAM: Protein of unknown function (DUF1648) YP_007945606.1 PFAM: Bacterial regulatory protein, arsR family YP_007945607.1 PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase YP_007945608.1 PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_007945609.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_007945610.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain YP_007945611.1 PFAM: ACT domain YP_007945612.1 PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A YP_007945613.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_007945614.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_007945615.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase YP_007945616.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_007945617.1 PFAM: Protein of unknown function (DUF512); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase YP_007945618.1 PFAM: Protein of unknown function (DUF3189) YP_007945619.1 PFAM: Protein of unknown function (DUF3189) YP_007945622.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P YP_007945623.1 PFAM: Protein of unknown function (DUF1614) YP_007945624.1 PFAM: LytB protein; S1 RNA binding domain; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); ribosomal protein S1 YP_007945625.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_007945626.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_007945627.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_007945628.1 PFAM: Prephenate dehydrogenase; ACT domain YP_007945629.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007945630.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007945631.1 PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1 YP_007945632.1 PFAM: HutP YP_007945635.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_007945636.1 PFAM: Nucleoside recognition YP_007945637.1 PFAM: Nucleoside recognition YP_007945638.1 PFAM: Glucose inhibited division protein A YP_007945639.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ YP_007945640.1 PFAM: Protein of unknown function (DUF2953) YP_007945641.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_007945642.1 PFAM: Peptidase family M50 YP_007945643.1 PFAM: DHH family; DHHA1 domain; CBS domain; Poly A polymerase head domain YP_007945644.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_007945646.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme YP_007945647.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_007945648.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_007945649.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_007945650.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007945652.1 PFAM: Protein of unknown function (DUF1458) YP_007945653.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma-F factor YP_007945654.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor YP_007945655.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist YP_007945656.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007945657.1 PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase YP_007945659.1 PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase YP_007945660.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; tyrosine recombinase XerD YP_007945662.1 PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M YP_007945666.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein YP_007945667.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family YP_007945668.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007945669.1 PFAM: domain YP_007945672.1 PFAM: Glycosyl transferase family 4 YP_007945673.1 PFAM: Glycosyl transferase family 2 YP_007945674.1 PFAM: Protein of unknown function (DUF3186) YP_007945675.1 PFAM: Thiamine pyrophosphokinase C terminal; Thiamin pyrophosphokinase, catalytic domain YP_007945676.1 PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A YP_007945677.1 PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B YP_007945678.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_007945679.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_007945680.1 PFAM: Putative rRNA methylase YP_007945681.1 PFAM: ATP-NAD kinase YP_007945682.1 PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein YP_007945683.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_007945685.1 PFAM: Polyprenyl synthetase YP_007945686.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_007945687.1 PFAM: Formiminotransferase-cyclodeaminase YP_007945688.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_007945689.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_007945690.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthase (NADPH), homotetrameric YP_007945691.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_007945692.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_007945693.1 PFAM: Small integral membrane protein (DUF2273) YP_007945694.1 PFAM: Protein of unknown function (DUF322) YP_007945695.1 PFAM: Protein of unknown function (DUF322) YP_007945696.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_007945697.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_007945699.1 TIGRFAM: stage III sporulation protein AG YP_007945700.1 PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF YP_007945701.1 PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE YP_007945702.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD YP_007945703.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC YP_007945704.1 PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB YP_007945705.1 PFAM: Protein of unknown function, DUF265; TIGRFAM: stage III sporulation protein AA YP_007945706.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain YP_007945708.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_007945709.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_007945710.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_007945711.1 PFAM: Putative modulator of DNA gyrase YP_007945713.1 PFAM: Protein of unknown function (DUF3243) YP_007945714.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_007945715.1 PFAM: Putative modulator of DNA gyrase YP_007945717.1 PFAM: Sodium:solute symporter family YP_007945718.1 PFAM: AMP-binding enzyme YP_007945719.1 PFAM: AMP-binding enzyme YP_007945723.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007945724.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme YP_007945725.1 PFAM: Flavodoxin-like fold YP_007945726.1 PFAM: Hexokinase YP_007945727.1 PFAM: Isocitrate lyase family; TIGRFAM: carboxyvinyl-carboxyphosphonate phosphorylmutase YP_007945728.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_007945729.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein YP_007945730.1 PFAM: PrpF protein YP_007945731.1 PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007945734.1 PFAM: Pilus assembly protein, PilO YP_007945735.1 PFAM: Fimbrial assembly protein (PilN) YP_007945736.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM YP_007945738.1 PFAM: Bacterial type II secretion system protein F domain YP_007945739.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_007945740.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain YP_007945741.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_007945742.1 PFAM: Shikimate kinase YP_007945743.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_007945744.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_007945745.1 PFAM: Protein of unknown function; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 YP_007945747.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_007945748.1 PFAM: 4Fe-4S binding domain YP_007945749.1 PFAM: Helix-turn-helix YP_007945750.1 TIGRFAM: putative beta-lysine N-acetyltransferase YP_007945751.1 PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase YP_007945752.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_007945753.1 PFAM: Peptidase family U32 YP_007945754.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_007945755.1 PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain YP_007945756.1 PFAM: Protein of unknown function (DUF1292) YP_007945757.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_007945758.1 PFAM: Aldo/keto reductase family YP_007945759.1 PFAM: Bacterial protein of unknown function (DUF965) YP_007945760.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_007945761.1 PFAM: Domain of unknown function DUF20 YP_007945764.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_007945765.1 PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type YP_007945766.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS YP_007945767.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_007945768.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_007945769.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_007945770.1 PFAM: Transposase DDE domain YP_007945771.1 PFAM: ThiF family YP_007945772.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_007945773.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_007945774.1 PFAM: Bacterial protein of unknown function (DUF896) YP_007945775.1 PFAM: AMP-binding enzyme YP_007945776.1 PFAM: Metallo-beta-lactamase superfamily YP_007945777.1 PFAM: Metallo-beta-lactamase superfamily YP_007945778.1 PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_007945779.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_007945780.1 PFAM: Cysteine-rich domain YP_007945781.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_007945782.1 TIGRFAM: exonuclease SbcC YP_007945783.1 PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD YP_007945785.1 PFAM: Major Facilitator Superfamily YP_007945786.1 PFAM: Sodium/hydrogen exchanger family; TrkA-C domain YP_007945787.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_007945790.1 PFAM: AMP-binding enzyme YP_007945791.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007945793.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007945794.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007945795.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007945796.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007945797.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; peptide chain release factor 3 YP_007945798.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_007945799.1 PFAM: Acylphosphatase YP_007945802.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein YP_007945803.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein YP_007945804.1 PFAM: VWA domain containing CoxE-like protein YP_007945805.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007945806.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_007945807.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_007945808.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_007945809.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_007945810.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_007945811.1 PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_007945812.1 PFAM: NADH dehydrogenase YP_007945813.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit YP_007945814.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C YP_007945815.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_007945816.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_007945817.1 PFAM: Ribonuclease HII YP_007945818.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF YP_007945819.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_007945820.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_007945821.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P YP_007945822.1 PFAM: LysM domain YP_007945823.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_007945824.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_007945825.1 PFAM: KH domain YP_007945826.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_007945827.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_007945828.1 PFAM: Putative helix-turn-helix protein, YlxM / p13 like; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007945829.1 PFAM: Aminotransferase class-III YP_007945830.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_007945831.1 PFAM: Protein of unknown function DUF86 YP_007945832.1 PFAM: Nucleotidyltransferase domain YP_007945833.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_007945834.1 PFAM: Amidohydrolase family YP_007945835.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_007945836.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_007945837.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_007945838.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_007945839.1 PFAM: ABC-2 type transporter YP_007945840.1 PFAM: ABC-2 type transporter YP_007945841.1 PFAM: ABC transporter YP_007945842.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007945843.1 PFAM: Bacterial regulatory proteins, tetR family YP_007945844.1 PFAM: Transposase domain (DUF772) YP_007945845.1 PFAM: PAP2 superfamily YP_007945846.1 PFAM: PIN domain YP_007945847.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007945848.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007945850.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007945851.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007945852.1 PFAM: Transcriptional regulator PadR-like family; TIGRFAM: poly-beta-hydroxybutyrate-responsive repressor YP_007945855.1 PFAM: Predicted permease YP_007945856.1 PFAM: Predicted permease YP_007945857.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007945858.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, subunit C YP_007945859.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase, subunit B YP_007945860.1 TIGRFAM: sulfite reductase, subunit A YP_007945864.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007945865.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007945866.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_007945868.1 PFAM: Transcriptional regulator PadR-like family YP_007945869.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: tungstate ABC transporter binding protein WtpA YP_007945870.1 PFAM: Sulfite exporter TauE/SafE YP_007945871.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_007945872.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_007945873.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_007945874.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_007945875.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_007945876.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_007945877.1 PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II YP_007945878.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_007945879.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX YP_007945880.1 PFAM: MaoC like domain; DeoR-like helix-turn-helix domain YP_007945881.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_007945882.1 PFAM: Uncharacterized ACR, COG1399 YP_007945883.1 PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ YP_007945884.1 PFAM: Protein of unknown function (DUF1097) YP_007945885.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_007945886.1 PFAM: Hydantoinase B/oxoprolinase YP_007945887.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_007945888.1 PFAM: Sigma-54 interaction domain YP_007945890.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_007945891.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_007945892.1 PFAM: Germination protease; TIGRFAM: GPR endopeptidase YP_007945893.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007945894.1 PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_007945895.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_007945896.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain YP_007945897.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_007945898.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007945899.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_007945900.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_007945901.1 PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_007945902.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007945903.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_007945905.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_007945907.1 PFAM: Bacterial regulatory proteins, gntR family; TrkA-C domain YP_007945908.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_007945909.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_007945910.1 PFAM: Protein kinase domain; PASTA domain YP_007945911.1 PFAM: Penicillin binding protein transpeptidase domain YP_007945912.1 PFAM: Cell cycle protein YP_007945913.1 PFAM: Protein phosphatase 2C YP_007945914.1 PFAM: FHA domain YP_007945915.1 PFAM: Protein of unknown function (DUF2662); FHA domain YP_007945916.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_007945917.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; NOL1/NOP2/sun family putative RNA methylase YP_007945918.1 PFAM: Protein of unknown function DUF116 YP_007945919.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_007945920.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_007945921.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N' YP_007945923.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: NHLM bacteriocin system ABC transporter, ATP-binding protein YP_007945924.1 PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein YP_007945925.1 TIGRFAM: NHLM bacteriocin system secretion protein YP_007945926.1 PFAM: Sodium:sulfate symporter transmembrane region; Receptor family ligand binding region; Cyclic nucleotide-binding domain YP_007945927.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007945928.1 PFAM: Nitrile hydratase, alpha chain; TIGRFAM: TOMM propeptide domain YP_007945929.1 PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain YP_007945930.1 PFAM: Protein of unknown function (DUF3307) YP_007945931.1 PFAM: Nitrile hydratase, alpha chain; TIGRFAM: TOMM propeptide domain YP_007945932.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain YP_007945933.1 PFAM: Acetyltransferase (GNAT) family YP_007945934.1 PFAM: Peptidase family S41 YP_007945935.1 PFAM: Bacterial Ig-like domain (group 2); Domain of unknown function; S-layer homology domain YP_007945936.1 PFAM: Protein kinase domain; Archaeal ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain YP_007945937.1 PFAM: Domain of unknown function (DUF1836) YP_007945938.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007945939.1 PFAM: PspA/IM30 family YP_007945940.1 PFAM: NfeD-like YP_007945941.1 PFAM: SPFH domain / Band 7 family YP_007945942.1 PFAM: Predicted permease YP_007945943.1 PFAM: ABC transporter YP_007945944.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007945945.1 PFAM: Protein of unknown function (DUF3298); Copper amine oxidase N-terminal domain YP_007945947.1 PFAM: Protein of unknown function (DUF820) YP_007945949.1 PFAM: NADPH-dependent FMN reductase YP_007945951.1 PFAM: Fic/DOC family YP_007945953.1 PFAM: HNH endonuclease YP_007945955.1 PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase YP_007945957.1 PFAM: Transposase DDE domain YP_007945959.1 PFAM: Endoribonuclease L-PSP YP_007945960.1 PFAM: FAD dependent oxidoreductase YP_007945961.1 PFAM: BFD-like [2Fe-2S] binding domain YP_007945962.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007945964.1 PFAM: Conserved region in glutamate synthase YP_007945965.1 PFAM: GXGXG motif YP_007945966.1 PFAM: Glutamine amidotransferases class-II YP_007945967.1 PFAM: Glutamine synthetase, catalytic domain YP_007945968.1 PFAM: WD domain, G-beta repeat YP_007945969.1 PFAM: Protein of unknown function (DUF3156) YP_007945970.1 PFAM: Amino acid permease YP_007945971.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007945972.1 PFAM: Aminotransferase class-III YP_007945973.1 PFAM: Bacterial regulatory proteins, tetR family YP_007945974.1 PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007945976.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007945978.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_007945980.1 TIGRFAM: YgiT-type zinc finger domain YP_007945983.1 PFAM: Amidohydrolase family YP_007945984.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_007945985.1 PFAM: Amidohydrolase family YP_007945986.1 PFAM: Aminotransferase class-III YP_007945987.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_007945988.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_007945989.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein YP_007945991.1 PFAM: Cysteine-rich domain YP_007945992.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain YP_007945993.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain YP_007945994.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_007945996.1 PFAM: Metallo-beta-lactamase superfamily YP_007945997.1 PFAM: MarR family; AsnC family YP_007945998.1 PFAM: Bacterial regulatory proteins, tetR family YP_007945999.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007946000.1 PFAM: Protein of unknown function (DUF3231) YP_007946002.1 PFAM: SirA-like protein YP_007946003.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007946004.1 PFAM: Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007946005.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_007946006.1 PFAM: NapC/NirT cytochrome c family, N-terminal region YP_007946007.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_007946008.1 PFAM: ResB-like family YP_007946019.1 PFAM: Hydroxyneurosporene synthase (CrtC) YP_007946020.1 PFAM: AMP-binding enzyme YP_007946021.1 PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase YP_007946024.1 PFAM: GMC oxidoreductase YP_007946027.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_007946028.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007946029.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_007946030.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_007946032.1 manually curated YP_007946034.1 PFAM: Spore germination protein gerPA/gerPF YP_007946035.1 PFAM: Hsp20/alpha crystallin family YP_007946039.1 PFAM: Radical SAM superfamily; TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ1; radical SAM additional 4Fe4S-binding domain YP_007946040.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_007946041.1 PFAM: ResB-like family YP_007946042.1 PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit YP_007946043.1 PFAM: Cytochrome c552 YP_007946044.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365) YP_007946045.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007946049.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007946050.1 PFAM: Condensation domain YP_007946051.1 PFAM: Amidohydrolase YP_007946054.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_007946055.1 PFAM: MarR family YP_007946056.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_007946057.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_007946058.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; manually curated YP_007946059.1 PFAM: Domain of unknown function (DUF370) YP_007946060.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_007946061.1 PFAM: Aminotransferase class I and II YP_007946062.1 PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase YP_007946063.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_007946064.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; golgi membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase YP_007946065.1 PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA) YP_007946066.1 PFAM: Protein of unknown function (DUF2680) YP_007946068.1 PFAM: Accessory gene regulator B YP_007946071.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007946072.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007946074.1 PFAM: Accessory gene regulator B YP_007946075.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated YP_007946076.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007946077.1 PFAM: Phage integrase family YP_007946078.1 PFAM: Phage integrase family YP_007946079.1 PFAM: IstB-like ATP binding protein YP_007946081.1 PFAM: MutS domain V YP_007946082.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007946083.1 PFAM: Predicted permease YP_007946084.1 PFAM: ABC transporter YP_007946085.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_007946086.1 PFAM: M42 glutamyl aminopeptidase YP_007946087.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007946088.1 PFAM: Iron-containing alcohol dehydrogenase YP_007946089.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007946090.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007946091.1 PFAM: Iron-containing alcohol dehydrogenase YP_007946092.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007946093.1 PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein YP_007946094.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007946095.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family YP_007946096.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007946097.1 PFAM: domain; Transketolase, C-terminal domain YP_007946098.1 PFAM: 4Fe-4S binding domain YP_007946099.1 PFAM: Cupin domain YP_007946100.1 PFAM: Domain of unknown function (DUF1287) YP_007946101.1 PFAM: Sigma-70, region 4 YP_007946102.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1 YP_007946103.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_007946104.1 PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_007946106.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_007946107.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_007946108.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_007946109.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; manually curated YP_007946110.1 PFAM: Phosphoribosyl transferase domain YP_007946111.1 PFAM: Protein of unknown function (DUF2619) YP_007946112.1 PFAM: Major Facilitator Superfamily YP_007946113.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_007946114.1 PFAM: Phd_YefM YP_007946115.1 PFAM: Tellurite resistance protein TehB YP_007946116.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_007946118.1 PFAM: Cysteine-rich domain YP_007946120.1 PFAM: Putative Fe-S cluster YP_007946122.1 PFAM: Bacterial regulatory proteins, tetR family YP_007946123.1 manually curated YP_007946124.1 PFAM: PIN domain YP_007946127.1 PFAM: Protein of unknown function (DUF820) YP_007946128.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007946130.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_007946131.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_007946136.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946137.1 PFAM: Nucleotidyltransferase domain YP_007946138.1 PFAM: Phage protein Gp37/Gp68 YP_007946139.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ) YP_007946142.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946144.1 PFAM: Protein of unknown function (DUF2837) YP_007946145.1 PFAM: DEAD/DEAH box helicase YP_007946146.1 PFAM: Domain of unknown function (DUF1837) YP_007946147.1 PFAM: DNA alkylation repair enzyme YP_007946148.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase YP_007946150.1 PFAM: Plasmid stabilisation system protein YP_007946151.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007946152.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007946153.1 PFAM: Tetratricopeptide repeat YP_007946157.1 PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_007946158.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein YP_007946160.1 PFAM: VanW like protein YP_007946162.1 PFAM: Prolyl oligopeptidase family YP_007946166.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946168.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_007946170.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946171.1 manually curated YP_007946173.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946176.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946180.1 PFAM: Copper amine oxidase N-terminal domain YP_007946184.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946192.1 PFAM: PIN domain YP_007946195.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946196.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007946197.1 PFAM: Phage integrase family YP_007946198.1 PFAM: Phage integrase family YP_007946199.1 PFAM: Copper amine oxidase N-terminal domain YP_007946201.1 PFAM: IS66 Orf2 like protein YP_007946202.1 PFAM: Transposase IS66 family YP_007946203.1 PFAM: Copper amine oxidase N-terminal domain; manually curated YP_007946208.1 PFAM: Sigma-70, region 4 YP_007946209.1 PFAM: BlaR1 peptidase M56; N-acetylmuramoyl-L-alanine amidase YP_007946210.1 PFAM: Penicillinase repressor; TIGRFAM: copper transport repressor, CopY/TcrY family YP_007946211.1 PFAM: Copper amine oxidase N-terminal domain YP_007946212.1 PFAM: Copper amine oxidase N-terminal domain YP_007946216.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946217.1 PFAM: Copper amine oxidase N-terminal domain YP_007946219.1 PFAM: Copper amine oxidase N-terminal domain YP_007946220.1 PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein YP_007946221.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: putative addiction module antidote YP_007946223.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007946224.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_007946225.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster YP_007946226.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: hydrogenase, Fe-only YP_007946227.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_007946228.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007946229.1 PFAM: Cupin domain; Helix-turn-helix YP_007946230.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_007946231.1 PFAM: CoA binding domain; manually curated YP_007946232.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_007946233.1 PFAM: Serpin (serine protease inhibitor) YP_007946235.1 PFAM: ABC transporter YP_007946236.1 PFAM: Bacterial regulatory proteins, gntR family YP_007946238.1 PFAM: Bacterial ABC transporter protein EcsB YP_007946239.1 PFAM: ABC transporter YP_007946240.1 PFAM: Copper amine oxidase N-terminal domain YP_007946242.1 PFAM: Serpin (serine protease inhibitor) YP_007946243.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_007946244.1 PFAM: Protein of unknown function (DUF1657) YP_007946245.1 PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_007946246.1 PFAM: short chain dehydrogenase YP_007946247.1 PFAM: Bacterial regulatory proteins, tetR family YP_007946248.1 PFAM: alpha/beta hydrolase fold YP_007946249.1 PFAM: Acetyltransferase (GNAT) family YP_007946250.1 PFAM: Acetyltransferase (GNAT) family YP_007946251.1 PFAM: Acetyltransferase (GNAT) family YP_007946253.1 PFAM: HxlR-like helix-turn-helix YP_007946254.1 PFAM: CGGC domain YP_007946255.1 PFAM: Protein of unknown function (DUF2397); TIGRFAM: TIGR02677 family protein YP_007946257.1 PFAM: NADPH-dependent FMN reductase YP_007946258.1 PFAM: Metallo-beta-lactamase superfamily YP_007946259.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_007946260.1 PFAM: Bacterial regulatory proteins, tetR family YP_007946261.1 PFAM: Nitroreductase family YP_007946262.1 PFAM: Transposase DDE domain YP_007946263.1 PFAM: Nitroreductase family YP_007946264.1 PFAM: HxlR-like helix-turn-helix YP_007946267.1 PFAM: Protein of unknown function DUF86 YP_007946269.1 PFAM: Protein of unknown function DUF45 YP_007946270.1 PFAM: Protein of unknown function (DUF559) YP_007946271.1 PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase YP_007946272.1 PFAM: CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007946274.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007946275.1 PFAM: Helix-turn-helix YP_007946277.1 PFAM: Protein of unknown function (DUF1624) YP_007946278.1 PFAM: DSBA-like thioredoxin domain; Contains selenocysteine; manually curated YP_007946279.1 PFAM: Carbonic anhydrase YP_007946280.1 PFAM: Chloroplast import component protein (Tic20) YP_007946281.1 PFAM: Protein of unknown function DUF45 YP_007946282.1 PFAM: (2R)-phospho-3-sulfolactate synthase (ComA) YP_007946283.1 PFAM: Protein of unknown function (DUF441) YP_007946284.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_007946285.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_007946286.1 PFAM: VanZ like family YP_007946290.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007946291.1 PFAM: Calcineurin-like phosphoesterase YP_007946292.1 PFAM: Aminotransferase class I and II YP_007946296.1 PFAM: Calcineurin-like phosphoesterase YP_007946298.1 PFAM: NUDIX domain YP_007946299.1 PFAM: ABC 3 transport family YP_007946300.1 PFAM: ABC transporter YP_007946301.1 PFAM: Periplasmic solute binding protein family YP_007946302.1 PFAM: Ferric uptake regulator family YP_007946303.1 PFAM: Transposase DDE domain YP_007946306.1 PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YP_007946307.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_007946308.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_007946309.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_007946310.1 PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension YP_007946312.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_007946313.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_007946314.1 PFAM: Ribonuclease E/G family; TRAM domain; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_007946315.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein YP_007946316.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein YP_007946317.1 PFAM: Peptidase family M50 YP_007946318.1 PFAM: Peptidase family M23 YP_007946319.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_007946320.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE YP_007946321.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD YP_007946322.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC YP_007946323.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_007946324.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_007946325.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_007946326.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_007946327.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_007946328.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_007946331.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_007946332.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007946333.1 PFAM: FeoA domain YP_007946334.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_007946335.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_007946336.1 TIGRFAM: putative membrane protein, TIGR04086 family; integral membrane protein, TIGR04097 family YP_007946337.1 PFAM: NMT1/THI5 like YP_007946338.1 PFAM: Small acid-soluble spore protein H family; TIGRFAM: small acid-soluble spore protein, H-type YP_007946342.1 PFAM: Putative transposase DNA-binding domain; Probable transposase; manually curated YP_007946343.1 PFAM: Transposase IS200 like YP_007946344.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain YP_007946345.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_007946346.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease YP_007946349.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_007946350.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_007946351.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_007946352.1 PFAM: Biotin-requiring enzyme YP_007946353.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007946354.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007946355.1 PFAM: EamA-like transporter family YP_007946357.1 PFAM: Protein of unknown function (DUF2512) YP_007946358.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD YP_007946359.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_007946360.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family YP_007946361.1 PFAM: Bacterial regulatory protein, arsR family YP_007946362.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_007946364.1 PFAM: PEP-utilising enzyme, TIM barrel domain YP_007946365.1 PFAM: Dynamin family YP_007946370.1 PFAM: Protein of unknown function (DUF815) YP_007946371.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007946373.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; DRTGG domain YP_007946374.1 PFAM: CoA binding domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain YP_007946377.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_007946378.1 PFAM: Protein of unknown function DUF134 YP_007946379.1 PFAM: PspC domain YP_007946380.1 PFAM: Rhomboid family YP_007946381.1 PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase YP_007946384.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_007946385.1 PFAM: AMP-binding enzyme YP_007946386.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_007946387.1 PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism; uncharacterized domain HDIG YP_007946389.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_007946390.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007946391.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007946392.1 PFAM: Coat F domain YP_007946394.1 PFAM: Metallopeptidase family M24; SEC-C motif; TIGRFAM: methionine aminopeptidase, type I YP_007946395.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_007946396.1 PFAM: Methyltransferase domain YP_007946397.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007946398.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007946401.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_007946402.1 PFAM: VWA domain containing CoxE-like protein YP_007946403.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_007946404.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_007946405.1 PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF3536) YP_007946406.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_007946411.1 PFAM: Protein of unknown function (DUF322) YP_007946413.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_007946415.1 PFAM: DnaJ domain; DnaJ C terminal region YP_007946416.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_007946417.1 PFAM: Universal stress protein family YP_007946418.1 PFAM: HTH domain YP_007946419.1 PFAM: NADPH-dependent FMN reductase YP_007946420.1 PFAM: Rubredoxin; Flavin reductase like domain YP_007946421.1 PFAM: Rubrerythrin YP_007946422.1 PFAM: Rubredoxin YP_007946423.1 PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain YP_007946424.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily YP_007946425.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007946426.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007946427.1 PFAM: Protein of unknown function (DUF1624) YP_007946431.1 PFAM: Outer spore coat protein E (CotE) YP_007946441.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_007946442.1 PFAM: NAD dependent epimerase/dehydratase family YP_007946446.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_007946447.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_007946448.1 PFAM: Glycosyl transferases group 1 YP_007946455.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007946456.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase YP_007946457.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase YP_007946460.1 PFAM: Uncharacterised protein family (UPF0150) YP_007946461.1 PFAM: YcfA-like protein YP_007946462.1 PFAM: Bacterial regulatory proteins, tetR family YP_007946463.1 PFAM: MarR family YP_007946464.1 PFAM: Uncharacterised ArCR, COG2043 YP_007946466.1 PFAM: Transposase DDE domain YP_007946467.1 PFAM: Transcriptional regulator PadR-like family YP_007946469.1 PFAM: Bacterial regulatory proteins, tetR family YP_007946470.1 PFAM: ABC transporter YP_007946471.1 manually curated YP_007946472.1 PFAM: Plasmid stabilisation system protein YP_007946473.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007946474.1 PFAM: Methyltransferase domain YP_007946475.1 PFAM: Transposase IS200 like YP_007946477.1 PFAM: IstB-like ATP binding protein; manually curated YP_007946479.1 PFAM: Transcriptional regulator PadR-like family YP_007946480.1 PFAM: Protein of unknown function (DUF2812) YP_007946481.1 PFAM: Erythromycin esterase YP_007946482.1 PFAM: Transposase, Mutator family YP_007946483.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_007946484.1 PFAM: SNARE associated Golgi protein YP_007946485.1 PFAM: Domain of unknown function (DUF362) YP_007946487.1 PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein YP_007946488.1 PFAM: Putative transposase YP_007946489.1 PFAM: Phage integrase family YP_007946491.1 PFAM: Transposase IS200 like YP_007946492.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_007946496.1 PFAM: Aminoglycoside-2''-adenylyltransferase YP_007946497.1 PFAM: CDP-alcohol phosphatidyltransferase YP_007946498.1 PFAM: Helix-turn-helix YP_007946499.1 PFAM: alpha/beta hydrolase fold YP_007946500.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007946504.1 PFAM: Plasmid pRiA4b ORF-3-like protein YP_007946509.1 PFAM: ADP-ribosylglycohydrolase YP_007946511.1 PFAM: Protein of unknown function (DUF429) YP_007946512.1 PFAM: Macro domain YP_007946514.1 PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr YP_007946515.1 PFAM: AlwI restriction endonuclease YP_007946516.1 PFAM: NgoFVII restriction endonuclease YP_007946517.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_007946518.1 PFAM: Helix-turn-helix YP_007946519.1 PFAM: Recombinase; Resolvase, N terminal domain YP_007946520.1 PFAM: Recombinase YP_007946521.1 PFAM: Recombinase; Resolvase, N terminal domain YP_007946523.1 PFAM: Resolvase, N terminal domain YP_007946526.1 PFAM: Helix-turn-helix YP_007946527.1 PFAM: Domain of unknown function (DUF955) YP_007946530.1 PFAM: Cache domain; HAMP domain; HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007946531.1 PFAM: Transposase DDE domain YP_007946532.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box YP_007946533.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007946534.1 PFAM: Spo0E like sporulation regulatory protein YP_007946535.1 PFAM: Helix-turn-helix YP_007946536.1 PFAM: Phage integrase family YP_007946537.1 PFAM: HTH domain YP_007946538.1 PFAM: TraG/TraD family YP_007946541.1 PFAM: Sel1 repeat YP_007946550.1 PFAM: AIG2-like family YP_007946551.1 PFAM: Putative amidoligase enzyme YP_007946552.1 PFAM: Domain of unknown function DUF87 YP_007946555.1 PFAM: C-5 cytosine-specific DNA methylase YP_007946567.1 PFAM: Type II/IV secretion system protein YP_007946568.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007946569.1 PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB YP_007946570.1 PFAM: Type IV leader peptidase family YP_007946572.1 PFAM: SpoVG YP_007946574.1 PFAM: S-layer homology domain YP_007946578.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam) YP_007946582.1 PFAM: Transposase DDE domain YP_007946583.1 PFAM: Acetyltransferase (GNAT) family YP_007946584.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_007946586.1 PFAM: Thermophilic metalloprotease (M29) YP_007946587.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold YP_007946588.1 PFAM: Response regulator receiver domain; Sigma-54 interaction domain YP_007946589.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007946590.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007946591.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_007946592.1 PFAM: Transposase, Mutator family YP_007946593.1 TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain YP_007946594.1 PFAM: MerR family regulatory protein; Resolvase, N terminal domain; TIGRFAM: DNA binding domain, excisionase family YP_007946595.1 PFAM: Domain of unknown function (DUF1848) YP_007946596.1 PFAM: Metal binding domain of Ada YP_007946597.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_007946598.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_007946600.1 PFAM: AMP-binding enzyme YP_007946601.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit YP_007946602.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_007946603.1 PFAM: Cobalt transport protein YP_007946604.1 PFAM: ABC transporter YP_007946605.1 PFAM: ABC transporter YP_007946606.1 manually curated YP_007946608.1 TIGRFAM: polyhydroxyalkanoic acid synthase, PhaR subunit YP_007946609.1 PFAM: MaoC like domain YP_007946610.1 PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit YP_007946612.1 PFAM: Polysaccharide deacetylase YP_007946613.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_007946614.1 PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: TIGR00251 family protein YP_007946615.1 PFAM: DivIVA protein; TIGRFAM: DivIVA domain YP_007946616.1 PFAM: S4 domain YP_007946617.1 PFAM: YGGT family YP_007946618.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_007946619.1 PFAM: Protein of unknown function (DUF552) YP_007946620.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_007946621.1 TIGRFAM: putative membrane fusion protein YP_007946622.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_007946623.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_007946624.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; phosphate regulon sensor kinase PhoR YP_007946625.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_007946626.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_007946627.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_007946628.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_007946629.1 PFAM: LysM domain YP_007946630.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; manually curated YP_007946631.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; intein N-terminal splicing region YP_007946632.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_007946633.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_007946635.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_007946636.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-E factor YP_007946637.1 PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA YP_007946638.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_007946639.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_007946640.1 PFAM: Protein of unknown function (DUF1290) YP_007946641.1 PFAM: Bacterial protein of unknown function (DUF881) YP_007946642.1 PFAM: Bacterial protein of unknown function (DUF881) YP_007946643.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_007946644.1 manually curated YP_007946651.1 PFAM: Uncharacterised protein family (UPF0150) YP_007946652.1 PFAM: YcfA-like protein YP_007946653.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_007946654.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_007946655.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--alanine ligase YP_007946656.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_007946657.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; cell division protein FtsW YP_007946658.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_007946659.1 PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_007946660.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_007946662.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_007946663.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D YP_007946664.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL YP_007946665.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_007946666.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_007946667.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family YP_007946669.1 PFAM: Patatin-like phospholipase; manually curated YP_007946670.1 PFAM: Ferric uptake regulator family YP_007946671.1 PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_007946672.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007946673.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_007946674.1 PFAM: FeoA domain YP_007946676.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_007946678.1 PFAM: Radical SAM superfamily YP_007946679.1 PFAM: Sulfite exporter TauE/SafE YP_007946683.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007946684.1 PFAM: CBS domain YP_007946686.1 PFAM: Response regulator receiver domain YP_007946688.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007946689.1 PFAM: AMP-binding enzyme YP_007946690.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_007946692.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007946693.1 PFAM: CBS domain YP_007946694.1 PFAM: Citrate transporter YP_007946695.1 PFAM: Cysteine-rich domain YP_007946697.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Methyl-viologen-reducing hydrogenase, delta subunit YP_007946698.1 PFAM: FAD binding domain YP_007946699.1 PFAM: FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit YP_007946700.1 PFAM: Adenosine-5'-phosphosulfate reductase beta subunit; TIGRFAM: adenosine phosphosulphate reductase, beta subunit YP_007946701.1 PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase YP_007946702.1 PFAM: Uncharacterised protein family (UPF0153) YP_007946704.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_007946705.1 PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family YP_007946706.1 PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_007946707.1 PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme YP_007946708.1 PFAM: ABC transporter YP_007946709.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_007946710.1 PFAM: Protein of unknown function (DUF964) YP_007946711.1 PFAM: TrkA-C domain YP_007946712.1 PFAM: Sodium/hydrogen exchanger family YP_007946713.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007946714.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain YP_007946715.1 PFAM: Ferritin-like domain YP_007946716.1 PFAM: Major Facilitator Superfamily YP_007946718.1 PFAM: Glutaredoxin YP_007946719.1 PFAM: MarR family YP_007946720.1 PFAM: Domain of unknown function (DUF296) YP_007946721.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; 4Fe-4S binding domain YP_007946722.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: 2-heptaprenyl-1,4-naphthoquinone methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferases YP_007946723.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007946724.1 PFAM: ABC transporter YP_007946725.1 PFAM: NMT1/THI5 like YP_007946728.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007946729.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_007946730.1 PFAM: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain YP_007946734.1 PFAM: PP-loop family YP_007946735.1 PFAM: Carbohydrate binding domain (family 25) YP_007946736.1 PFAM: Membrane protein of unknown function YP_007946737.1 PFAM: Uncharacterised ACR, COG1259 YP_007946738.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007946739.1 PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II YP_007946740.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007946741.1 PFAM: CoA binding domain YP_007946742.1 PFAM: Protein of unknown function, DUF654 YP_007946744.1 PFAM: X-Pro dipeptidyl-peptidase (S15 family) YP_007946745.1 PFAM: NAD dependent epimerase/dehydratase family YP_007946746.1 PFAM: Integral membrane protein DUF95 YP_007946748.1 PFAM: TrkA-N domain; TrkA-C domain YP_007946749.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_007946750.1 PFAM: Major Facilitator Superfamily YP_007946752.1 PFAM: Protein of unknown function (DUF421) YP_007946753.1 PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases YP_007946756.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_007946757.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_007946758.1 PFAM: ABC transporter YP_007946759.1 PFAM: NMT1/THI5 like YP_007946760.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007946761.1 PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family YP_007946762.1 PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase YP_007946764.1 PFAM: ABC transporter YP_007946765.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_007946766.1 PFAM: ABC transporter YP_007946767.1 PFAM: Periplasmic binding protein; Radical SAM superfamily YP_007946768.1 PFAM: Methyltransferase domain YP_007946769.1 PFAM: Periplasmic binding protein YP_007946770.1 PFAM: FecCD transport family YP_007946771.1 PFAM: Domain of unknown function (DUF364) YP_007946772.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007946773.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_007946774.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_007946775.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_007946776.1 PFAM: Indole-3-glycerol phosphate synthase YP_007946777.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_007946778.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_007946779.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_007946780.1 PFAM: Protein of unknown function (DUF1294) YP_007946781.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_007946782.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_007946783.1 PFAM: HD domain YP_007946786.1 PFAM: Protein of unknown function (DUF3243) YP_007946787.1 PFAM: CoA-transferase family III YP_007946788.1 PFAM: Metallo-beta-lactamase superfamily YP_007946789.1 PFAM: SCP-2 sterol transfer family YP_007946790.1 PFAM: UvrD/REP helicase; TIGRFAM: helicase-exonuclease AddAB, AddA subunit, Firmicutes type YP_007946791.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: helicase-exonuclease AddAB, AddB subunit YP_007946793.1 PFAM: Sporulation and spore germination; Immunoglobulin-like domain of bacterial spore germination YP_007946796.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_007946797.1 PFAM: Putative RNA methylase family UPF0020 YP_007946798.1 PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II YP_007946799.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_007946801.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase YP_007946804.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007946812.1 PFAM: Nitroreductase family YP_007946813.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_007946815.1 PFAM: Methyltransferase domain YP_007946817.1 PFAM: Bacterial membrane flanked domain YP_007946818.1 PFAM: Bacterial membrane flanked domain YP_007946819.1 PFAM: Insecticide toxin TcdB middle/C-terminal region; Insecticide toxin TcdB middle/N-terminal region; Salmonella virulence plasmid 65kDa B protein; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_007946822.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007946823.1 PFAM: MarR family YP_007946824.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007946825.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007946826.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain YP_007946827.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_007946828.1 PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain; Contains selenocysteine; manually curated YP_007946829.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain; Contains selenocysteine; manually curated YP_007946830.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_007946831.1 PFAM: Cysteine-rich domain YP_007946833.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007946834.1 PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; Contains selenocysteine; manually curated YP_007946835.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_007946839.1 PFAM: O-Antigen ligase YP_007946840.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007946843.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region YP_007946845.1 TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_007946846.1 PFAM: Bacterial regulatory proteins, tetR family YP_007946847.1 PFAM: Beta-lactamase YP_007946850.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_007946852.1 PFAM: Domain of unknown function (DUF1814) YP_007946855.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_007946857.1 PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007946858.1 PFAM: AMP-binding enzyme YP_007946859.1 PFAM: Acetone carboxylase gamma subunit YP_007946860.1 PFAM: Hydantoinase B/oxoprolinase YP_007946861.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_007946863.1 PFAM: Radical SAM superfamily YP_007946864.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_007946865.1 manually curated YP_007946867.1 PFAM: Aminotransferase class-III YP_007946868.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_007946869.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_007946870.1 PFAM: Transposase IS66 family YP_007946871.1 PFAM: IS66 Orf2 like protein YP_007946873.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_007946874.1 PFAM: AmiS/UreI family transporter YP_007946875.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein YP_007946876.1 PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family YP_007946877.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain YP_007946878.1 PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type YP_007946879.1 PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family YP_007946880.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold YP_007946881.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; ACT domain; manually curated YP_007946882.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007946883.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007946884.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; TIGRFAM: pyrrolysine biosynthesis protein PylD YP_007946885.1 PFAM: tRNA synthetases class II core domain (F); TIGRFAM: pyrrolysyl-tRNA synthetase, C-terminal region YP_007946886.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007946887.1 PFAM: Pterin binding enzyme YP_007946888.1 TIGRFAM: pyrrolysyl-tRNA synthetase, N-terminal region YP_007946889.1 PFAM: ATP-grasp domain; TIGRFAM: pyrrolysine biosynthesis protein PylC YP_007946890.1 PFAM: Radical SAM superfamily; TIGRFAM: pyrrolysine biosynthesis radical SAM protein YP_007946891.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_007946893.1 PFAM: Transposase domain (DUF772) YP_007946894.1 PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220) YP_007946899.1 PFAM: Integrase core domain YP_007946900.1 PFAM: IstB-like ATP binding protein YP_007946904.1 PFAM: Transposase DDE domain YP_007946905.1 PFAM: Subtilase family YP_007946906.1 PFAM: Arginase family; TIGRFAM: agmatinase YP_007946907.1 PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase YP_007946908.1 PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent YP_007946909.1 PFAM: Protein of unknown function (DUF1269) YP_007946910.1 PFAM: Xylose isomerase-like TIM barrel YP_007946911.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007946916.1 PFAM: Protein of unknown function (DUF1113) YP_007946917.1 PFAM: 4Fe-4S binding domain YP_007946918.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007946919.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007946920.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit YP_007946921.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007946922.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007946923.1 PFAM: Transcriptional regulator PadR-like family YP_007946924.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_007946925.1 PFAM: XdhC and CoxI family YP_007946926.1 TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family YP_007946927.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: molybdenum hydroxylase accessory protein, YgfJ family YP_007946928.1 TIGRFAM: probable selenium-dependent hydroxylase accessory protein YqeC YP_007946929.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_007946930.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit YP_007946931.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007946932.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007946933.1 PFAM: AAA domain (dynein-related subfamily) YP_007946934.1 PFAM: von Willebrand factor type A domain YP_007946935.1 PFAM: Amidohydrolase YP_007946936.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases YP_007946937.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases YP_007946939.1 PFAM: AMP-binding enzyme YP_007946940.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_007946941.1 PFAM: Activator of aromatic catabolism; V4R domain YP_007946942.1 PFAM: AMP-binding enzyme YP_007946943.1 PFAM: CBS domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007946944.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007946945.1 PFAM: AMP-binding enzyme; TIGRFAM: benzoate-CoA ligase family YP_007946946.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_007946947.1 PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases YP_007946949.1 PFAM: Starch synthase catalytic domain; Domain of unknown function (DUF1957); Glycosyl transferases group 1; Glycosyl hydrolase family 57 YP_007946950.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T YP_007946951.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit YP_007946952.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_007946953.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_007946954.1 PFAM: Coat F domain YP_007946955.1 PFAM: Cyclic nucleotide-binding domain YP_007946956.1 PFAM: Bacterial regulatory protein, arsR family YP_007946957.1 PFAM: Predicted permease YP_007946958.1 TIGRFAM: small redox-active disulfide protein 2 YP_007946959.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007946960.1 PFAM: Copper amine oxidase N-terminal domain YP_007946963.1 PFAM: Nitroreductase family YP_007946964.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain YP_007946966.1 PFAM: Bacterial regulatory proteins, gntR family YP_007946967.1 PFAM: ABC transporter YP_007946969.1 PFAM: AMP-binding enzyme YP_007946970.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007946971.1 PFAM: Enoyl-CoA hydratase/isomerase family; manually curated; non-canonical start codon YP_007946972.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007946973.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007946974.1 PFAM: Activator of aromatic catabolism; V4R domain YP_007946975.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007946976.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_007946977.1 PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_007946978.1 PFAM: ABC transporter YP_007946979.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007946980.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_007946981.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_007946982.1 PFAM: Glycosyl transferases group 1 YP_007946986.1 PFAM: Copper amine oxidase N-terminal domain YP_007946987.1 PFAM: Copper amine oxidase N-terminal domain YP_007946989.1 PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin YP_007946990.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946992.1 PFAM: Copper amine oxidase N-terminal domain YP_007946994.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007946995.1 PFAM: Stage II sporulation protein YP_007946996.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007946997.1 PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain; SWIM zinc finger YP_007946998.1 PFAM: Nucleotidyltransferase domain YP_007946999.1 PFAM: HEPN domain YP_007947000.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug); manually curated YP_007947002.1 PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin YP_007947004.1 PFAM: CHAP domain YP_007947005.1 PFAM: BlaR1 peptidase M56 YP_007947006.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_007947007.1 PFAM: EamA-like transporter family YP_007947012.1 PFAM: Transposase domain (DUF772) YP_007947013.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007947014.1 PFAM: Pyruvate kinase, alpha/beta domain YP_007947016.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_007947019.1 PFAM: Major Facilitator Superfamily YP_007947020.1 PFAM: LysM domain YP_007947021.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_007947023.1 PFAM: Protein of unknown function (DUF2466) YP_007947026.1 PFAM: Protein of unknown function (DUF523) YP_007947027.1 PFAM: GIY-YIG catalytic domain YP_007947030.1 PFAM: Phosphoribulokinase / Uridine kinase family YP_007947031.1 PFAM: NlpC/P60 family; LysM domain YP_007947032.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_007947033.1 PFAM: Protein of unknown function (DUF763) YP_007947036.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007947037.1 PFAM: HIT domain YP_007947039.1 PFAM: 4Fe-4S binding domain YP_007947041.1 PFAM: Uncharacterised protein family (UPF0153) YP_007947043.1 PFAM: AMP-binding enzyme YP_007947044.1 PFAM: Transposase DDE domain YP_007947045.1 PFAM: CBS domain YP_007947046.1 PFAM: Calcineurin-like phosphoesterase YP_007947047.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_007947049.1 PFAM: 4Fe-4S binding domain YP_007947050.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007947051.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family YP_007947052.1 PFAM: AhpC/TSA family YP_007947054.1 PFAM: ABC transporter YP_007947055.1 PFAM: Bacterial regulatory proteins, gntR family YP_007947056.1 PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F YP_007947057.1 PFAM: Uncharacterised ACR, COG2135 YP_007947059.1 PFAM: Mechanosensitive ion channel YP_007947060.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_007947061.1 PFAM: GHMP kinases C terminal; TIGRFAM: beta-RFAP synthase YP_007947062.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_007947063.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_007947064.1 PFAM: DeoC/LacD family aldolase YP_007947066.1 PFAM: LysM domain YP_007947068.1 PFAM: Glycosyl transferase family 2 YP_007947069.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; pyridoxal phosphate-dependent acyltransferase, putative; 5-aminolevulinic acid synthase YP_007947070.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase YP_007947071.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase YP_007947072.1 PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein YP_007947073.1 TIGRFAM: TIGR04076 family protein YP_007947074.1 PFAM: TrkA-N domain; TrkA-C domain YP_007947075.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_007947078.1 PFAM: Methyltransferase domain YP_007947079.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family YP_007947080.1 PFAM: Bacterial regulatory protein, arsR family YP_007947081.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_007947083.1 PFAM: ATP synthase; TIGRFAM: alternate F1F0 ATPase, F1 subunit gamma; ATP synthase, F1 gamma subunit YP_007947084.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; alternate F1F0 ATPase, F1 subunit alpha YP_007947085.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: alternate F1F0 ATPase, F0 subunit B YP_007947086.1 PFAM: ATP synthase subunit C; TIGRFAM: alternate F1F0 ATPase, F0 subunit C YP_007947087.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); alternate F1F0 ATPase, F0 subunit A YP_007947088.1 TIGRFAM: F1/F0 ATPase, Methanosarcina type, subunit 2 YP_007947089.1 PFAM: Putative F0F1-ATPase subunit (ATPase_gene1); TIGRFAM: F0F1-ATPase subunit, putative YP_007947090.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: alternate F1F0 ATPase, F1 subunit epsilon YP_007947091.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit; alternate F1F0 ATPase, F1 subunit beta YP_007947093.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2 YP_007947094.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG; CRISPR-associated endonuclease Cas1 YP_007947095.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4 YP_007947096.1 PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG YP_007947097.1 PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG YP_007947098.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-C/DVULG; CRISPR-associated protein Cas5, N-terminal domain YP_007947099.1 PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD YP_007947100.1 PFAM: Spo0E like sporulation regulatory protein YP_007947101.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007947102.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007947103.1 PFAM: Sulfite exporter TauE/SafE YP_007947105.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PAS domain S-box YP_007947106.1 PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit YP_007947107.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_007947108.1 PFAM: ATP-NAD kinase YP_007947109.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Carboxymuconolactone decarboxylase family; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; alkylhydroperoxidase AhpD family core domain YP_007947110.1 PFAM: Radical SAM superfamily; Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; lipoate synthase YP_007947111.1 PFAM: Methyltransferase domain YP_007947112.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: amidophosphoribosyltransferase YP_007947115.1 PFAM: Thiopurine S-methyltransferase (TPMT) YP_007947116.1 PFAM: Amino acid permease YP_007947117.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_007947119.1 PFAM: Sigma-70, region 4 YP_007947121.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007947123.1 PFAM: Protein of unknown function (DUF3160) YP_007947124.1 PFAM: Bacterial capsule synthesis protein PGA_cap YP_007947125.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_007947126.1 PFAM: Protein of unknown function (DUF1232) YP_007947129.1 TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain YP_007947130.1 PFAM: MerR family regulatory protein; Resolvase, N terminal domain YP_007947133.1 PFAM: Acetyltransferase (GNAT) family YP_007947134.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease YP_007947135.1 PFAM: Citrate transporter YP_007947136.1 PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein YP_007947137.1 PFAM: ABC transporter YP_007947138.1 PFAM: Transcriptional regulator PadR-like family YP_007947140.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_007947141.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_007947142.1 PFAM: Sulfotransferase domain YP_007947143.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007947145.1 PFAM: Sulfite exporter TauE/SafE YP_007947147.1 PFAM: DoxX YP_007947148.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2087); Bacterial regulatory proteins, luxR family YP_007947149.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007947150.1 PFAM: DnaJ domain YP_007947152.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007947153.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; Contains selenocysteine; manually curated YP_007947156.1 PFAM: Type III restriction enzyme, res subunit; manually curated YP_007947157.1 PFAM: DNA methylase YP_007947158.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_007947160.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_007947162.1 PFAM: Copper resistance protein D YP_007947163.1 PFAM: SWIM zinc finger YP_007947164.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_007947165.1 PFAM: Bacterial regulatory proteins, tetR family YP_007947166.1 PFAM: Protein of unknown function (DUF3231) YP_007947168.1 PFAM: Plasmid stabilisation system protein YP_007947169.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_007947171.1 PFAM: L,D-transpeptidase catalytic domain YP_007947172.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007947173.1 PFAM: Putative Fe-S cluster YP_007947174.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_007947175.1 PFAM: Bacterial regulatory proteins, tetR family YP_007947176.1 PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase YP_007947177.1 PFAM: Predicted metal-binding protein (DUF2284); O-methyltransferase YP_007947178.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_007947179.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_007947182.1 PFAM: VTC domain YP_007947183.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007947184.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007947185.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase YP_007947186.1 PFAM: Activator of aromatic catabolism; V4R domain YP_007947187.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007947189.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_007947190.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_007947191.1 PFAM: AsnC family YP_007947192.1 PFAM: PHP domain YP_007947193.1 PFAM: PhoH-like protein YP_007947195.1 PFAM: Alkaline phosphatase YP_007947196.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007947197.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_007947198.1 PFAM: Helix-turn-helix YP_007947199.1 PFAM: Protein of unknown function (DUF1044); manually curated YP_007947200.1 PFAM: Putative transposase DNA-binding domain; Probable transposase YP_007947201.1 PFAM: Transposase IS200 like YP_007947203.1 PFAM: Acetyltransferase (GNAT) family YP_007947204.1 PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein; manually curated YP_007947205.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_007947206.1 PFAM: Phage integrase family YP_007947207.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_007947208.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007947209.1 PFAM: Thioesterase superfamily YP_007947213.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase YP_007947214.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_007947215.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_007947216.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_007947217.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_007947218.1 PFAM: Phosphoglycerate kinase YP_007947219.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_007947220.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_007947221.1 PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein YP_007947222.1 PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI YP_007947223.1 PFAM: Aminotransferase class-V YP_007947224.1 PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related YP_007947225.1 PFAM: P-loop ATPase protein family YP_007947226.1 PFAM: PHP domain YP_007947227.1 PFAM: Phosphoglucose isomerase YP_007947228.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_007947229.1 PFAM: Coenzyme A transferase YP_007947230.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_007947231.1 PFAM: Transposase IS200 like YP_007947232.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_007947233.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein YP_007947234.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_007947236.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007947237.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_007947238.1 PFAM: NifU-like N terminal domain YP_007947239.1 PFAM: Ankyrin repeat YP_007947242.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_007947244.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_007947245.1 PFAM: Predicted RNA-binding protein YP_007947246.1 PFAM: PDZ domain (Also known as DHR or GLGF) YP_007947247.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007947248.1 PFAM: Peptidase family M23 YP_007947249.1 PFAM: Predicted permease YP_007947250.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein YP_007947251.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_007947252.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_007947253.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_007947254.1 PFAM: Rubrerythrin YP_007947256.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated YP_007947257.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_007947258.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_007947259.1 PFAM: 'Cold-shock' DNA-binding domain YP_007947260.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_007947261.1 PFAM: GGDEF domain; GAF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007947263.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_007947264.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_007947265.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007947266.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific YP_007947268.1 PFAM: NAD dependent epimerase/dehydratase family YP_007947269.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_007947270.1 PFAM: Glycosyl transferase family 4 YP_007947271.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_007947272.1 PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB YP_007947273.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_007947274.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_007947278.1 PFAM: Copper amine oxidase N-terminal domain YP_007947282.1 PFAM: Copper amine oxidase N-terminal domain YP_007947283.1 PFAM: S-layer homology domain YP_007947284.1 PFAM: Copper amine oxidase N-terminal domain YP_007947286.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007947287.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007947289.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007947291.1 PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007947293.1 TIGRFAM: DNA binding domain, excisionase family YP_007947297.1 PFAM: Insertion element protein YP_007947298.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007947300.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_007947301.1 PFAM: VRR-NUC domain; manually curated YP_007947303.1 PFAM: Protein of unknown function (DUF669) YP_007947304.1 PFAM: DNA polymerase family B YP_007947305.1 PFAM: BRO family, N-terminal domain YP_007947306.1 PFAM: Poxvirus D5 protein-like; D5 N terminal like; Primase C terminal 1 (PriCT-1); TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain YP_007947309.1 PFAM: Protein of unknown function (DUF1492) YP_007947311.1 PFAM: HNH endonuclease; manually curated YP_007947312.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family YP_007947313.1 PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family YP_007947314.1 PFAM: DNA methylase; ParB-like nuclease domain YP_007947315.1 PFAM: DNA methylase; ParB-like nuclease domain YP_007947318.1 PFAM: Putative amidoligase enzyme YP_007947320.1 PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family YP_007947321.1 PFAM: Phage Terminase YP_007947322.1 PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family YP_007947323.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_007947324.1 PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_007947325.1 PFAM: Clp protease YP_007947326.1 PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_007947327.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) YP_007947328.1 PFAM: Uncharacterised Sugar-binding Domain YP_007947329.1 PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: uncharacterized phage protein (possible DNA packaging) YP_007947330.1 PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family YP_007947331.1 PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family YP_007947333.1 TIGRFAM: phage major tail protein, phi13 family YP_007947336.1 PFAM: Phd_YefM YP_007947337.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_007947338.1 PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region YP_007947339.1 PFAM: Phage tail protein YP_007947347.1 PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin YP_007947348.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Sporulation related domain YP_007947349.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007947352.1 PFAM: Protein of unknown function (DUF2442) YP_007947354.1 PFAM: Putative transposase, YhgA-like YP_007947355.1 PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007947358.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007947360.1 PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007947362.1 PFAM: Clostripain family YP_007947363.1 PFAM: Bacterial Ig-like domain (group 2); Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family YP_007947365.1 PFAM: Transposase domain (DUF772) YP_007947366.1 PFAM: Y_Y_Y domain; Subtilase family YP_007947367.1 PFAM: Copper amine oxidase N-terminal domain YP_007947369.1 PFAM: Transposase IS200 like YP_007947370.1 PFAM: CRISPR associated protein Cas2 YP_007947374.1 PFAM: IS66 Orf2 like protein YP_007947375.1 PFAM: Transposase IS66 family YP_007947378.1 PFAM: Archaeal ATPase; manually curated YP_007947379.1 PFAM: Transposase YP_007947380.1 manually curated YP_007947386.1 PFAM: Protein of unknown function (DUF2442) YP_007947389.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007947390.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_007947391.1 PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin YP_007947398.1 PFAM: Phage tail protein YP_007947399.1 PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region YP_007947402.1 PFAM: Uncharacterised Sugar-binding Domain; TIGRFAM: phage major tail protein, phi13 family YP_007947404.1 PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family YP_007947405.1 PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family YP_007947406.1 PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: uncharacterized phage protein (possible DNA packaging) YP_007947407.1 PFAM: Uncharacterised Sugar-binding Domain YP_007947408.1 PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_007947409.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_007947410.1 PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_007947411.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family YP_007947412.1 PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family YP_007947413.1 PFAM: Phage Terminase YP_007947414.1 PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family YP_007947416.1 PFAM: AIG2-like family YP_007947418.1 PFAM: Putative amidoligase enzyme YP_007947421.1 PFAM: DNA methylase; ParB-like nuclease domain YP_007947422.1 PFAM: DNA methylase; ParB-like nuclease domain YP_007947423.1 PFAM: HNH endonuclease; manually curated YP_007947424.1 PFAM: Domain of unknown function (DUF1814) YP_007947426.1 PFAM: Protein of unknown function (DUF1492) YP_007947428.1 PFAM: SNF2 family N-terminal domain YP_007947429.1 PFAM: VRR-NUC domain YP_007947430.1 PFAM: D5 N terminal like; Primase C terminal 1 (PriCT-1); TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain YP_007947431.1 PFAM: AntA/AntB antirepressor YP_007947434.1 PFAM: DNA polymerase family A YP_007947435.1 PFAM: Protein of unknown function (DUF2815) YP_007947436.1 PFAM: Protein of unknown function (DUF2800) YP_007947439.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007947442.1 manually curated YP_007947445.1 PFAM: Integrase core domain YP_007947446.1 TIGRFAM: YgiT-type zinc finger domain YP_007947448.1 PFAM: Transposase IS200 like YP_007947452.1 PFAM: Helix-turn-helix YP_007947453.1 PFAM: Domain of unknown function (DUF955) YP_007947456.1 PFAM: Replication regulatory protein RepB YP_007947458.1 PFAM: MBOAT family YP_007947460.1 PFAM: Glycosyl transferase family 2 YP_007947461.1 PFAM: ABC transporter YP_007947462.1 PFAM: ABC-2 type transporter YP_007947463.1 PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2 YP_007947464.1 PFAM: Glycosyl transferases group 1 YP_007947466.1 PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2 YP_007947467.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_007947468.1 PFAM: Glycosyl transferases group 1 YP_007947469.1 PFAM: O-Antigen ligase YP_007947470.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_007947471.1 PFAM: HlyD family secretion protein; manually curated YP_007947472.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007947473.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007947474.1 PFAM: MarR family YP_007947475.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family YP_007947476.1 PFAM: Phd_YefM YP_007947477.1 PFAM: Copper amine oxidase N-terminal domain YP_007947478.1 PFAM: Outer membrane efflux protein YP_007947479.1 PFAM: Copper amine oxidase N-terminal domain YP_007947481.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-W factor YP_007947483.1 PFAM: S-layer homology domain; Subtilase family YP_007947484.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_007947485.1 PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID YP_007947487.1 PFAM: Stage II sporulation protein; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain YP_007947488.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_007947489.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_007947490.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit YP_007947491.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_007947492.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_007947493.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_007947494.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_007947495.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_007947496.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_007947497.1 PFAM: ATP synthase I chain YP_007947498.1 PFAM: Putative F0F1-ATPase subunit (ATPase_gene1) YP_007947499.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box; intein N-terminal splicing region YP_007947500.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_007947501.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_007947502.1 PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type YP_007947503.1 PFAM: ThiS family YP_007947504.1 PFAM: Amino acid permease YP_007947505.1 PFAM: Coenzyme A transferase YP_007947506.1 PFAM: Coenzyme A transferase YP_007947507.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_007947508.1 PFAM: CBS domain; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007947509.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit YP_007947510.1 PFAM: Biotin-requiring enzyme YP_007947511.1 PFAM: Oxaloacetate decarboxylase, gamma chain YP_007947512.1 PFAM: Carboxyl transferase domain YP_007947513.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007947514.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_007947515.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_007947516.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007947517.1 PFAM: Serine hydroxymethyltransferase YP_007947518.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_007947519.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_007947520.1 PFAM: Domain of unknown function DUF YP_007947521.1 PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_007947522.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_007947523.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_007947524.1 PFAM: Protein of unknown function (DUF1385) YP_007947525.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_007947528.1 PFAM: Nucleotidyltransferase domain YP_007947529.1 PFAM: Protein of unknown function DUF86 YP_007947530.1 PFAM: Peptidase family M23; LysM domain YP_007947531.1 PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_007947532.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2062) YP_007947533.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; manually curated; non-canonical start codon YP_007947534.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist YP_007947536.1 PFAM: Response regulator receiver domain YP_007947537.1 PFAM: Yip1 domain YP_007947538.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_007947539.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_007947540.1 PFAM: Protein of unknown function (DUF1427); TIGRFAM: XapX domain; PEP-CTERM putative exosortase interaction domain YP_007947541.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_007947542.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit YP_007947543.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_007947544.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_007947545.1 PFAM: Aminotransferase class I and II YP_007947546.1 PFAM: AsnC family YP_007947547.1 TIGRFAM: germination protein YpeB YP_007947548.1 PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme YP_007947550.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase YP_007947551.1 PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family YP_007947553.1 PFAM: Nitrate reductase gamma subunit YP_007947554.1 PFAM: 4Fe-4S binding domain YP_007947555.1 PFAM: ParA/MinD ATPase like; Anion-transporting ATPase YP_007947556.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007947557.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007947558.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_007947559.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_007947561.1 PFAM: Uncharacterised protein family (UPF0153) YP_007947562.1 PFAM: Tetratricopeptide repeat YP_007947563.1 PFAM: Dissimilatory sulfite reductase D (DsrD) YP_007947564.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit YP_007947565.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit YP_007947566.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain YP_007947567.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_007947568.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type YP_007947570.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only YP_007947571.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007947572.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007947573.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007947574.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007947575.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007947576.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007947577.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: butyryl-CoA:acetate CoA-transferase YP_007947578.1 PFAM: Protein of unknown function (DUF1156) YP_007947582.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007947583.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_007947584.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_007947585.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_007947588.1 PFAM: Peptidase family M23; G5 domain; LysM domain YP_007947589.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; six-Cys-in-45 modification radical SAM protein YP_007947590.1 TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated YP_007947594.1 PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase YP_007947595.1 PFAM: Phage holin protein (Holin_LLH) YP_007947599.1 PFAM: NADPH-dependent FMN reductase YP_007947600.1 PFAM: Nucleotidyltransferase domain YP_007947601.1 PFAM: Metallo-beta-lactamase superfamily; Flavodoxin YP_007947602.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_007947603.1 PFAM: Glycosyl transferases group 1 YP_007947604.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_007947605.1 PFAM: NAD dependent epimerase/dehydratase family YP_007947606.1 PFAM: Glycosyl transferases group 1 YP_007947607.1 PFAM: Glycosyl transferases group 1 YP_007947608.1 PFAM: O-Antigen ligase; Predicted membrane protein (DUF2142) YP_007947609.1 PFAM: Polysaccharide biosynthesis protein YP_007947610.1 PFAM: O-Antigen ligase YP_007947611.1 PFAM: Glycosyl transferases group 1 YP_007947612.1 PFAM: Glycosyl transferase family 2 YP_007947614.1 PFAM: GtrA-like protein YP_007947615.1 PFAM: Polysaccharide biosynthesis protein YP_007947616.1 PFAM: NAD dependent epimerase/dehydratase family YP_007947617.1 PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP YP_007947618.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_007947619.1 PFAM: NAD dependent epimerase/dehydratase family YP_007947620.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; manually curated; non-canonical start codon YP_007947621.1 PFAM: FemAB family YP_007947622.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007947623.1 PFAM: Protein of unknown function (DUF3307) YP_007947624.1 PFAM: Glycosyl transferases group 1; O-Antigen ligase YP_007947625.1 PFAM: Glycosyl transferases group 1 YP_007947628.1 PFAM: Polysaccharide biosynthesis protein YP_007947629.1 PFAM: Glycosyl transferases group 1 YP_007947630.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007947631.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_007947632.1 PFAM: Formyl transferase YP_007947633.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007947634.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_007947635.1 PFAM: FAD dependent oxidoreductase YP_007947636.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_007947637.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease, Lon family YP_007947638.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_007947639.1 PFAM: Predicted membrane protein (DUF2232) YP_007947641.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_007947642.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_007947643.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_007947644.1 PFAM: Bacterial protein of unknown function (DUF951) YP_007947645.1 PFAM: Aminopeptidase I zinc metalloprotease (M18) YP_007947646.1 PFAM: Colicin V production protein YP_007947648.1 PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC YP_007947649.1 PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins YP_007947650.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007947651.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_007947652.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_007947653.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain YP_007947654.1 PFAM: R3H domain YP_007947655.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain YP_007947656.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_007947657.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; IMG reference gene:2508510980_SP