-- dump date 20140619_061500 -- class Genbank::CDS -- table cds_note -- id note YP_002601288.1 DNA polymerase III, beta subunit; GO:3677;3887;6260;8408 YP_002601289.1 DNA gyrase subunit B; GO:3677;3918;5524;6259;6265 YP_002601291.1 protein TonB; GO:8565;15031;16020;30288 YP_002601292.1 biopolymer transport protein ExbD; GO:5215;6810;16020 YP_002601293.1 biopolymer transport protein TolQ1; GO:6810;8565;16020 YP_002601294.1 biopolymer transport protein TolQ2; GO:3824 YP_002601296.1 GO:5554 YP_002601297.1 GO:9058;16769 YP_002601298.1 GO:3824 YP_002601299.1 GO:3677;5524 YP_002601300.1 site-specific tyrosine recombinase XerD1 (DNA breaking-rejoining enzyme) YP_002601301.1 HTH-type transcriptional regulator (heavy metal/copper efflux protein) YP_002601302.1 GO:3824 YP_002601303.1 GO:3824 YP_002601305.1 cobalamin (vitamin B12) biosynthesis protein CbiC (precorrin-8X methylmutase); GO:9236;16993 YP_002601306.1 cobyrinic acid a,c-diamide synthase CbiA1; GO:9236;42242 YP_002601307.1 cobalamin biosynthesis protein CbiD (cobalt-precorrin-6A synthase); GO:9236 YP_002601308.1 DNA-binding endonuclease III NthA (helix-hairpin-helix DNA-binding protein); GO:4519 YP_002601310.1 multidrug efflux transporter NorM (MATE efflux family protein, Na-driven pump); GO:6855;15238;15297;16020 YP_002601312.1 GO:7165;16301 YP_002601313.1 HTH-type transcriptional regulator MalT; GO:3824;30528 YP_002601315.1 GO:3824;7165;16301 YP_002601316.1 GO:3824;5279;6865;30288 YP_002601320.1 GO:5215;6810;16020 YP_002601321.1 GO:5215;6810;16020 YP_002601323.1 GO:3824;4009;5524;6810 YP_002601325.1 GO:5506 YP_002601326.1 similar to Kinesin light chain 1 (KLC 1) YP_002601327.1 site-specific DNA-invertase/resolvase RlgA1 (Site-specific recombinase RlgA); GO:150;6310 YP_002601330.1 predicted cation-transporting P-type ATPase SilP; GO:4008;5524;6812;6825;15662;16020 YP_002601332.1 cation efflux system family protein RndA (heavy metal, antibiotica resistance); GO:6812;16021;8324 YP_002601333.1 predicted cation efflux system, transmembrane protein RndB (heavy metal, antibiotica resistance); GO:3824;6810;16020 YP_002601334.1 GO:3824 YP_002601335.1 GO:3824 YP_002601336.1 trimethylamine methyltransferase MttB (TMA methyltransferase); GO:8168;15948 YP_002601337.1 GO:5215;6810;16020 YP_002601338.1 trimethylamine corrinoid protein (TCP); GO:9086;50897 YP_002601339.1 vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase); GO:4156;9396 YP_002601341.1 GO:3824 YP_002601344.1 GO:5554 YP_002601345.1 GO:5554 YP_002601346.1 GO:5524;16887 YP_002601347.1 GO:5215;6810;16020 YP_002601348.1 regulator of cell morphogenesis and NO signaling (RCMNS) YP_002601349.1 GO:16021 YP_002601350.1 nitrate reductase, gamma subunit; GO:9325;6118;8940 YP_002601351.1 nitrate reductase, delta subunit; GO:8940;9325;6118 YP_002601352.1 nitrate reductase, beta subunit; GO:5489;5506;6118;8940;9325;42126 YP_002601353.1 respiratory nitrate reductase, alpha subunit; GO:6118;8940;9325;42126 YP_002601355.1 secretion protein HlyD; GO:8565;9306;16020 YP_002601356.1 GO:16020 YP_002601357.1 GO:4009;5524;6810;16020;16887 YP_002601358.1 GO:5215;6810;8289;16020 YP_002601361.1 GO:4489;6555 YP_002601364.1 GO:3824 YP_002601365.1 GO:8982;9401;16021 YP_002601366.1 formate hydrogen-lyase transcriptional activator FhlA (Sigma-54 factor interaction region); GO:160;3677;3824 YP_002601368.1 predicted heterodisulfide reductase subunit HdrD1 (hdrCB homoloque protein) YP_002601369.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_002601370.1 GO:3824 YP_002601373.1 anaerobic transcriptional regulator, Crp/Fnr family (fumarate and nitrate reduction regulatory protein); GO:3700 YP_002601375.1 trimethylamine N-oxide reductase, membrane-bound cytochrome c-type subunit NapC YP_002601378.1 GO:8565;9306;16020 YP_002601379.1 GO:5215;6810;8289;16020 YP_002601380.1 GO:3824 YP_002601382.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx1; GO:5489;5506;6118 YP_002601383.1 SAM-dependent ubiquinone/menaquinone biosynthesis methyltransferase UbiE; GO:8168;8757 YP_002601384.1 ribose-phosphate pyrophosphokinase PrsA; GO:4749;9165;9116;9156 YP_002601386.1 GO:3824;16740 YP_002601387.1 GO:3824 YP_002601388.1 GO:5524;16887 YP_002601389.1 GO:5215;6810;16020 YP_002601390.1 similar to Fe3+-hydroxamate transport system; GO:3824 YP_002601391.1 similar to Fe3+/FecCD family protein; GO:5215;6810;16020 YP_002601392.1 GO:4009;5524;6810;16020;16887 YP_002601395.1 similar to YgdD YP_002601401.1 similar to transaldolase; GO:5509 YP_002601402.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx2; GO:5489;5506;6118 YP_002601404.1 GO:3824 YP_002601406.1 dihydroxy-acid dehydratase IlvD (DAD); catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002601407.1 GO:3824 YP_002601408.1 GO:5293;6865;16020 YP_002601409.1 high affinity BCCT-family transporter BetL (choline-glycine betaine transporter); GO:5215;6810;16020 YP_002601410.1 GO:4156;9396 YP_002601411.1 high affinity BCCT-family transporter BetT (choline-glycine betaine transporter); GO:5215;6810;16020 YP_002601412.1 trimethylamine methyltransferase MttB (TMA methyltransferase); GO:8168;15948 YP_002601413.1 GO:3677;3824;5524;9605;30528;45449 YP_002601414.1 GO:3824 YP_002601416.1 GO:156;160;3677;6355 YP_002601418.1 contains deoxyribonuclease domain YP_002601419.1 contains deoxyribonuclease domain YP_002601421.1 GO:3824 YP_002601422.1 ferric uptake regulation protein; GO:3700;6355 YP_002601423.1 bifunctional catalase / peroxidase enzyme CatA; GO:4096;4601;6118;6979 YP_002601424.1 ubiquinone/menaquinone biosynthesis methyltransferase UbiE; GO:8168;8757 YP_002601425.1 agmatinase SpeB (agmatine ureohydrolase) (AUH); GO:8783;6596 YP_002601426.1 Pyridoxal-dependent decarboxylase (carboxynorspermidine decarboxylase); GO:16830;45312 YP_002601427.1 saccharopine dehydrogenase/saccharopine reductase LysA YP_002601428.1 biosynthetic arginine decarboxylase SpeA (ADC); catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis YP_002601431.1 GO:4222;6508;16020;16021 YP_002601433.1 Peptide methionine sulfoxide reductase (Methionine-S-sulfoxide reductase); GO:6464;8113;19538 YP_002601434.1 GO:5215;6810;16021 YP_002601436.1 Glucose-1-phosphate adenylyltransferase 2 (ADP-glucose synthase) (ADP-glucose pyrophosphorylase 2) (ADPGlc PPase 2); catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_002601437.1 GO:3824;5525 YP_002601438.1 GO:6531;8797 YP_002601439.1 biothin synthethase BioB YP_002601440.1 GO:4009;5524;6810;16020;16887 YP_002601441.1 GO:6810;16020;5215 YP_002601442.1 GO:3824;6810 YP_002601443.1 GO:160;3677;3824 YP_002601444.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx3; GO:5489;5506;6118 YP_002601445.1 Fe-only fusion hydrogenase HydA1 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain); GO:3824;5489;6118 YP_002601446.1 cytoplasmic formate dehydrogenase, beta subunit FdhB1 (4Fe-4S family protein); GO:5489;5506;6118 YP_002601447.1 NADH-dependent, cytoplasmic formate dehydrogenase, alpha subunit FdhA1 (selenocysteine protein); GO:8863;9326;15942 YP_002601448.1 chorismate synthase AroC (5-enolpyruvylshikimate-3-phosphate phospholyase); GO:4107;9073 YP_002601449.1 related to capsule biosynthesis enzymes; GO:3824 YP_002601450.1 GO:3677 YP_002601454.1 GO:3824;4009;5524;6810;16020 YP_002601455.1 GO:5215;6810;16020 YP_002601456.1 putative ABC-type transporter, periplasmic component; GO:15412;15689;30288 YP_002601457.1 GO:3824 YP_002601458.1 arsenate reductase ArsC (arsenical pump modifier); GO:4725;6470 YP_002601459.1 GO:3824 YP_002601460.1 GO:3824;4871;6935;7165;16020 YP_002601461.1 phosphate ABC-type transporter, Binding-protein-dependent permease protein (inner membrane component); GO:5315;6817;16021 YP_002601462.1 phosphate ABC-type transporter, permease protein (inner membrane component); GO:5215;5315;6810;6817;15114;16020;19866 YP_002601463.1 phosphate ABC-type transporter, periplasmic phosphate binding protein, part 1; GO:3824;5215;6810;16020 YP_002601464.1 GO:3824;4803 YP_002601465.1 phosphate ABC-type transporter, periplasmic phosphate binding protein, part 2 YP_002601466.1 phosphate import ABC-type transporter, ATP-binding protein PstB (Phosphate-transporting ATPase); GO:4009;5315;5524;6810;6817;15114;16020;19866 YP_002601467.1 phosphate uptake regulator protein PhoU YP_002601468.1 GO:3824;16740 YP_002601469.1 phosphoenolpyruvate (PEP)-dependent phosphotransferase PstA1 (PTS system enzyme I); GO:5737;5351;8965;9401;16310;16772 YP_002601471.1 GO:3824 YP_002601473.1 GO:3824 YP_002601474.1 alkaline phosphatase PhoA; GO:8152;4035 YP_002601475.1 GO:3824 YP_002601476.1 phosphatidylserine decarboxylase proenzyme PsdD YP_002601479.1 DnaK suppressor protein DksA YP_002601480.1 GO:5554 YP_002601481.1 GO:6281 YP_002601483.1 GO:6118;16491 YP_002601484.1 GO:6118;16491 YP_002601485.1 Na+/H+ antiporter protein NhaD; GO:3824 YP_002601486.1 transcriptional activator protein NhaR (Na+/H+ antiporter regulatory protein); GO:3700;6355 YP_002601487.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx4; GO:5489;5506;6118 YP_002601488.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor1; GO:6118;16730 YP_002601489.1 iron containing alcohol dehydrogenase Adh1; GO:5506;8152;16491 YP_002601490.1 iron containing alcohol dehydrogenase Adh2; GO:3824;5506;8152;16491 YP_002601493.1 GO:3824 YP_002601495.1 GO:5215;6810;16021 YP_002601496.1 GO:3824;4871;7165 YP_002601497.1 GO:5524 YP_002601499.1 GO:5554 YP_002601500.1 hydroxylamine reductase Hcp1 (Hybrid-cluster protein) (Prismane protein) (HCP1); catalyzes the reduction of hydroxylamine to ammonia and water YP_002601501.1 related to 5' to 3' DNA helicase; GO:3824;4386 YP_002601502.1 GO:5554 YP_002601504.1 GO:4553;5975 YP_002601505.1 GO:3677;3700;6352;6355;16987 YP_002601506.1 GO:3824 YP_002601509.1 cobinamide kinase/cobinamide phosphate guanylyltransferase CobU; GO:16301;9236 YP_002601510.1 cobyric acid synthase CobQ; catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_002601511.1 cob(I)alamin adenosyltransferase (Corrinoid adenosyltransferase) CobO; GO:9236;8817;5524 YP_002601512.1 precorrin-3B C17-methyltransferase CobJ (Precorrin-3 methyltransferase) (Precorrin-3 methylase); GO:8152;8168;9236 YP_002601513.1 cobalamin biosynthesis protein CbiG; GO:9236 YP_002601514.1 precorrin-4 C11-methyltransferase CobM; GO:8152;8168 YP_002601515.1 decarboxylating precorrin-6Y C5,15-methyltransferase CobL (Precorrin-6 methyltransferase) (Precorrin-6Y methylase); GO:8152;8168;9236;46025 YP_002601516.1 GO:1882 YP_002601517.1 precorrin-2 C20-methyltransferase CbiL (S-adenosyl-L- methionine--precorrin-2 methyltransferase); GO:8152;8168;9236 YP_002601518.1 GO:3824 YP_002601519.1 GO:4009;5524;6810;16020;16887 YP_002601520.1 GO:6810;16020;5215 YP_002601521.1 GO:3824 YP_002601523.1 GO:16021;8324 YP_002601524.1 GO:8565;9306;16020 YP_002601525.1 similar to CusC precursor; GO:5215;6810;8289;16020 YP_002601527.1 GO:3824;7165;16301 YP_002601528.1 GO:160;156;3677 YP_002601529.1 GO:5554 YP_002601530.1 phosphate transport system regulatory protein PhoU; GO:6817 YP_002601531.1 phosphate ABC-type transporter, ATP-binding protein PstB (Phosphate- transporting ATPase) (ABC phosphate transporter); ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_002601532.1 phosphate ABC-type transporter, permease protein PstA; GO:5215;5315;6810;6817;15114;16020;19866 YP_002601533.1 phosphate ABC-type transporter, permease protein PstC; GO:5215;5315;6810;6817;16020;16021 YP_002601534.1 phosphate ABC-type transporter, substrate-binding protein PstS; GO:6810;5215 YP_002601535.1 GO:5524 YP_002601536.1 GO:155;160;3824;6355;7165 YP_002601537.1 GO:155;160 YP_002601538.1 GO:3824 YP_002601539.1 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (Ketopantoate hydroxymethyltransferase); catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002601540.1 histidyl-tRNA synthetase HisS (Histidine--tRNA ligase) (HisRS); GO:4812;4821;5524;5737;6418;6427 YP_002601541.1 aspartyl-tRNA synthetase AspS (Aspartate-tRNA ligase) (AspRS); GO:4812;4815;5524;5737;6418;6422 YP_002601542.1 xanthine phosphoribosyltransferase Xpt; GO:9116;16740;16763;43101;46110 YP_002601543.1 GO:5554 YP_002601544.1 septum site-determining protein MinE YP_002601545.1 septum site-determining protein MinD (ATPase); GO:918;5524;16887 YP_002601546.1 septum site-determining protein MinC; GO:74 YP_002601547.1 GO:6468;7165;16301 YP_002601548.1 GO:156;160;3824;5622 YP_002601549.1 GO:3824 YP_002601550.1 GO:5554 YP_002601552.1 dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N N-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase); GO:154;179;8649;8757 YP_002601553.1 GO:3824 YP_002601554.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis YP_002601555.1 molybdenum cofactor biosynthesis protein MoeA1 (shorter) YP_002601556.1 molybdenum cofactor biosynthesis protein MoeA2; GO:6777 YP_002601557.1 citrate (si)-synthase GltA1; GO:4108;6092;6099;46912 YP_002601559.1 DNA repair protein RecN (Recombination protein N); GO:4009;5524;6281;6310;6810;16020 YP_002601560.1 GO:3824 YP_002601561.1 branched-chain amino acid transporter, ATP-binding protein LivF; GO:4009;5524;6810;16020;16887 YP_002601562.1 branched-chain amino acid transporter, ATP-binding component LivG; GO:4009;5524;6810;16020;16887 YP_002601563.1 high-affinity branched-chain amino acid transporter, permease protein LivM; GO:5215;6810;16020 YP_002601564.1 high-affinity branched-chain amino acid transporter, permease protein LivH; GO:5215;6810;16020 YP_002601565.1 high-affinity branched chain amino acid transporter, leu/ile/val-binding protein precursor LivJ (LS-BP) (L-BP); GO:5279;6865;30288 YP_002601566.1 inorganic polyphosphate/ATP-NAD kinase PpnK (Poly(P)/ATP NAD kinase); GO:3951;8152;16301;16740 YP_002601567.1 GO:16020 YP_002601569.1 oxygen sensor protein FixL; GO:3824 YP_002601571.1 GO:160;3677;3824 YP_002601576.1 GO:3824 YP_002601578.1 GO:16491 YP_002601581.1 GO:3677;3700;6352;6355;16987 YP_002601582.1 universal stress protein UspA1; GO:3824;5489;6118 YP_002601583.1 electron transfer flavoprotein, alpha-subunit EtfA1 (Electron transfer flavoprotein large subunit) (ETFLS); GO:3824 YP_002601584.1 electron transfer flavoprotein, beta subunit EtfB1 (Electron transfer flavoprotein small subunit) (ETFSS); GO:5489;6118 YP_002601585.1 nicotinate phosphoribosyltransferase (NAPRTase); catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_002601586.1 GO:3824;8152 YP_002601587.1 GO:3824;3995;6118;16491 YP_002601588.1 GO:45449 YP_002601590.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_002601591.1 3-oxoacyl (acyl-carrier protein) reductase FabG1; GO:8152;16491 YP_002601592.1 GO:3824;3995;6118;16491 YP_002601593.1 GO:5489;5506;6118;16491 YP_002601594.1 GO:8152;16491 YP_002601595.1 3-oxoacyl (acyl-carrier protein) reductase FabG2; GO:8152;16491 YP_002601597.1 asparate racemace; GO:6520;8152;16855 YP_002601600.1 histidinol dehydrogenase HisD (HDH); catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_002601601.1 TRAP-type C4-dicarboxylate permease, large subunit DctM1; GO:16020;16021 YP_002601602.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ1 YP_002601603.1 TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP1; GO:6810;30288 YP_002601605.1 heterodisulfide reductase, subunit HdrF1' (HdrB homologue protein) YP_002601606.1 heterodisulfide reductase, subunit HdrF1 (HdrC homologue protein) YP_002601607.1 anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpB1; sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters YP_002601608.1 anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpA1; GO:3824 YP_002601610.1 NADP-dependent 2,4-dienoyl-CoA reductase (2,4-dienoyl coenzyme A reductase); GO:16491;6118;8670 YP_002601611.1 GO:3700;5622;6355 YP_002601612.1 NADP-specific glutamate dehydrogenase GdhA (NADP-GDH); converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_002601613.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA1 (PEP synthase); GO:3824;5524;6781;8986;16094;16310 YP_002601614.1 GO:3824 YP_002601616.1 1,4-alpha-glucan branching enzyme; GO:4553;5975 YP_002601618.1 amino acid transport system, periplasmic amino acid-binding protein ArgT (LAO-binding protein); GO:5215;6810;30288 YP_002601619.1 GO:5215;6810;16020 YP_002601620.1 glutamine transport system, ATP-binding protein GlnQ1; GO:4009;5524;6810;16020;16887 YP_002601621.1 glutamine transport system, permease protein GlnP1 (His/Glu/Gln/Arg-transporter family protein); GO:5215;6810;16020 YP_002601622.1 formate dehydrogenase associated protein FdhD; GO:6118;9326;8863 YP_002601623.1 long-chain-fatty-acid--CoA ligase FadD1 (Acetyl-CoA-synthetase) (Acyl-activating enzyme); GO:3824;8152 YP_002601624.1 DNA-binding response regulator ColR; GO:6355;156;3677 YP_002601625.1 sensor signal hisitidine kinase ColS (two-component system); GO:3824;7165;16301 YP_002601626.1 GO:8080 YP_002601627.1 periplasmic formate dehydrogenase, alpha subunit FdhA2 (selenocysteine protein); GO:45333;6118;5737;8863 YP_002601628.1 periplasmic formate dehydrogenase, beta subunit FdhB2 (4Fe-4S family protein); GO:5489;5506;6118 YP_002601629.1 formate dehydrogenase, formation protein FdhE1; GO:5489;5506;6118 YP_002601632.1 GO:3824;6777 YP_002601633.1 GO:3700;6355 YP_002601634.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA2 (PEP synthase); GO:3824;5524;6781;8986;16094;16310 YP_002601635.1 NAD-specific glutamate dehydrogenase GdhA (NAD-GDH); GO:3824;6520;16491 YP_002601636.1 GO:3824 YP_002601637.1 GO:5279;6865;30288 YP_002601639.1 ethanolamine ammonia-lyase, light chain EutC; GO:6520;8851;16829 YP_002601640.1 ethanolamine ammonia-lyase, heavy chain EutB; GO:6520;8851;16829 YP_002601642.1 GO:16491;6118 YP_002601644.1 GO:3824;7165;16301 YP_002601645.1 GO:3824 YP_002601646.1 Alginate biosynthesis protein AlgI; GO:42121;16740 YP_002601648.1 aldehyde dehydrogenase AldA; GO:16491;8152 YP_002601649.1 GO:160;3677;3824 YP_002601654.1 GO:3824 YP_002601657.1 GO:4009;5524;6810;16020;16887 YP_002601658.1 GO:3824 YP_002601662.1 GO:160;3677;3824 YP_002601663.1 lysine 2,3-aminomutase KamA; GO:16853 YP_002601664.1 GO:3824 YP_002601667.1 GO:3824 YP_002601670.1 SOS (error prone) mutagenis protein UmuD (DNA polymerase V ) YP_002601671.1 DNA-repair protein UmuC1 (Nucleotidyltransferase protein); GO:6281 YP_002601672.1 DNA-repair protein UmuC2 (Nucleotidyltransferase protein) YP_002601674.1 GO:16021 YP_002601675.1 GO:8080 YP_002601676.1 GO:5554 YP_002601679.1 membrane-bound lytic murein transglycosylase MltB [precursor] (Murein hydrolase B precursor) YP_002601680.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002601685.1 heat shock protein 70 chaperone DnaK YP_002601686.1 heat shock protein 70 cofactor GrpE (HSP-70 cofactor) YP_002601693.1 molybdenum-iron cofactor biosynthesis protein NifB (radical SAM superfamily) YP_002601707.1 formate C-acetyltransferase PflD1 (Pyruvate formate-lyase 1) YP_002601708.1 pyruvate formate-lyase, activating enzyme PflC1 YP_002601719.1 ATP-dependent protease proteolytic subunit ClpP (Endopeptidase Clp) YP_002601720.1 ATP-dependent Clp protease, ATP-binding subunit ClpX; binds and unfolds substrates as part of the ClpXP protease YP_002601721.1 ATP-dependent protease La YP_002601722.1 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase); catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_002601723.1 succinyl-CoA synthetase, beta subunit SucC1 YP_002601726.1 cold-shock protein CspL YP_002601727.1 quinone-interacting membrane-bound oxidoreductase complex, subunit QmoC YP_002601728.1 quinone-interacting membrane-bound oxidoreductase complex, subunit QmoB YP_002601729.1 quinone-interacting membrane-bound oxidoreductase complex, subunit QmoA YP_002601730.1 adenylylsulfate reductase, subunit AprA; catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite YP_002601731.1 adenylylsulfate reductase, subunit AprB YP_002601733.1 3-oxoacyl (acyl-carrier protein) reductase FabG3 YP_002601735.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_002601737.1 translation initiation factor IF-3 YP_002601738.1 50S ribosomal protein L35 YP_002601739.1 50S ribosomal protein L20 YP_002601740.1 phenylalanyl-tRNA synthetase, alpha subunit; catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002601741.1 phenylalanyl-tRNA synthetase, beta subunit YP_002601743.1 transcription elongation protein NusA; modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_002601744.1 translation initiation factor IF-2 (GTPase) YP_002601745.1 ribosome-binding factor RbfA YP_002601746.1 tRNA pseudouridine synthase B (Pseudouridylate synthase) (Uracil hydrolyase) YP_002601747.1 ribosomal 30S RNA binding protein S15 YP_002601748.1 polyribonucleotide nucleotidyltransferase PnpA YP_002601755.1 pantoate-beta-alanine ligase PanC (Pantothenate synthetase) (Pantoate activating enzyme); catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002601758.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_002601759.1 shikimate kinase AroK (SK) YP_002601760.1 molybdopterin biosynthesis protein MoeA YP_002601761.1 alanine racemase Alr YP_002601762.1 pyruvate-formate lyase-activating enzyme PflA YP_002601763.1 anaerobic ribonucleoside-triphosphate reductase NrdD; Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_002601766.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor2 YP_002601767.1 sarcosine oxidase, subunit beta YP_002601768.1 sarcosine oxidase, subunit alpha YP_002601769.1 branched-chain amino acid ABC-type transporter, ATP-binding protein LivF YP_002601770.1 branched-chain amino acid ABC-type transporter, ATP-binding protein LivG YP_002601771.1 high-affinity branched-chain amino acid ABC-type transporter, permease protein LivM YP_002601772.1 branched-chain amino acid ABC-type transporter, permease protein LivH YP_002601773.1 Leu/Ile/Val/Thr-binding protein LivJ [precursor] YP_002601776.1 cell-division initiation protein DivIVA YP_002601777.1 pili retraction protein PilT1 YP_002601778.1 pili retraction protein PilT2 YP_002601783.1 dihydropteroate synthase FolP (DHPS) (Dihydropteroate pyrophosphorylase) YP_002601784.1 cell division protein FtsH YP_002601787.1 sn-glycerol 3-phosphate ABC-type transporter, ATP binding protein UgpC YP_002601788.1 sn-glycerol 3-phosphate ABC-type transporter, periplasmic substrate binding protein UgpA YP_002601789.1 sn-glycerol-3-phosphate ABC-type transporter, permease protein UgpA YP_002601790.1 sn-glycerol-3-phosphate ABC-type transporter, permease protein UgpE YP_002601798.1 adenine phosphoribosyltransferase Apt (APRT) YP_002601800.1 glutamate racemase MurI YP_002601801.1 D-erythrose-4-phosphate dehydrogenase YP_002601804.1 mechanosensitive small-conductance channel MscC1 YP_002601805.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor3 YP_002601806.1 cytoplasmic protein RtcB YP_002601810.1 uracil permease UraA (uracil/xanthine permease family protein) YP_002601811.1 uracil phosphoribosyltransferase (UMP pyrophosphorylase) (UPRTase); Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_002601812.1 primosomal protein N (Replication factor Y) YP_002601814.1 sigma-54 dependent DNA-binding response regulator YP_002601815.1 conserved hypothetical protein YbaK YP_002601816.1 succinyl-CoA synthetase, beta subunit SucC2 YP_002601817.1 glutamate/glutamine/aspartate/asparagine transport system, ATP-binding component AapP YP_002601818.1 glutamate/glutamine/aspartate/asparagine transport system, permease protein AapM YP_002601819.1 glutamate/glutamine/aspartate/asparagine transport system, permease protein AapQ YP_002601853.1 sensory histidine kinase CusS YP_002601855.1 DNA-directed RNA polymerase, specialized sigma subunit RpoE (Sigma-24) YP_002601868.1 NAD(P) transhydrogenase, alpha subunit PntA , part 1 YP_002601869.1 NAD(P) transhydrogenase, alpha subunit PntA, part 2 YP_002601870.1 NAD(P) transhydrogenase, beta subunit PntB YP_002601885.1 phospho-2-dehydro-3-deoxyheptonate aldolase AroF (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase); catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_002601886.1 3-dehydroquinate synthase AroB YP_002601891.1 cardiolipin synthetase Cls (Cardiolipin synthase) (CL synthase) YP_002601892.1 methyl-accepting chemotaxis protein McpB YP_002601893.1 acyl-CoA thioesterase II (TEII) YP_002601894.1 methionine gamma-lyase MdeA (L-methionase) YP_002601897.1 rubrerythrin (RR) YP_002601903.1 spermidine synthase (Putrescine aminopropyltransferase 1) (SPDSY 1) YP_002601904.1 S-adenosylmethionine decarboxylase SpeD (AdoMetDC) (SamDC) YP_002601905.1 fatty acid oxidation complex FadJ, alpha subunit YP_002601906.1 oxaloacetate decarboxylase, beta chain OadB YP_002601910.1 ribose binding ABC-type transporter, ATP-binding protein RbsA YP_002601911.1 ribose binding ABC-type transporter, permease protein RbsC1 YP_002601912.1 ribose binding ABC-type transporter, inner-membrane translocator RbsC2 YP_002601913.1 universal stress protein UspA2 YP_002601919.1 lysophopholipase PldB (alpha/beta hydrolase family protein) YP_002601922.1 peroxidase / catalse KatG YP_002601923.1 F420-non-reducing hydrogenase, iron-sulfur subunit MvhD1 (selenocysteine protein; 4Fe-4S) YP_002601924.1 C-terminal similar to heterodisulfide reductases YP_002601929.1 DNA primase DnaG1 (Zinc finger, CHC2-type protein) YP_002601940.1 ribosomal protein L11 methyltransferase PrmA (L11 Mtase) YP_002601943.1 tRNA modification GTPase TrmE YP_002601945.1 60 kD inner-membrane protein OxaA YP_002601947.1 Ribonuclease P protein component (RNaseP protein) (Protein C5) YP_002601948.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_002601949.1 ribonuclease E and G (ribonuclease Rne/Rng family protein) YP_002601951.1 Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS); catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002601953.1 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase CobT (NaMN:DMB phosphoribosyltransferase) YP_002601954.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_002601956.1 succinyl-CoA synthetase, alpha subunit SucD1 (succinyl-CoA ligase) YP_002601960.1 type I glutamate-ammonia ligase GlnA1 (glutamine synthetase) YP_002601961.1 nitrogen regulatory protein GlnB1 (P-II; transcriptional regulator of glnA) YP_002601962.1 protein-P-II uridylyltransferase GlnD (Uridylyl removing enzyme) (UTase) YP_002601963.1 sec-independent protein translocase protein TatA (TatE homolog); TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002601966.1 Mg-dependent deoxyribonuclease TatD (DNase TatD) YP_002601968.1 serine O-acetyltransferase CysE1 (bacterial transferase hexapeptide repeat family) YP_002601969.1 cysteine synthase CysA1 (O-acetylserine sulfhydrylase A) YP_002601970.1 Na+-translocating NADH:ubiquinone oxidoreductase, subunit NrqA; uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_002601971.1 Na(+)-translocating NADH-quinone reductase, subunit NqrB; uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_002601972.1 Na+-translocating NADH-quinone reductase, subunit NqrC YP_002601973.1 Na(+)-translocating NADH-quinone reductase, subunit NqrD YP_002601974.1 Na(+)-translocating NADH-quinone reductase, subunit NqrE YP_002601975.1 Na(+)-translocating NADH-quinone reductase, subunit NqrF; uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_002601986.1 aldehyde oxidoreductase Mop YP_002601991.1 cytidine monophosphate kinase Cmk YP_002601992.1 cytidine monophosphate kinase Cmk YP_002601996.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA3 (PEP synthase) YP_002601997.1 sensor histidine kinase MtrB YP_002601998.1 small heat shock protein HspA (HSP20-like chaperone) YP_002602001.1 urocanate hydratase HutU1 (Urocanase) (Imidazolonepropionate hydrolase); catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_002602005.1 cold shock-like protein CspG (CPS-G) YP_002602013.1 Methionine synthase MtbC (5-methyltetrahydrofolate-- homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) YP_002602017.1 DNA primase DnaG2 (Zinc finger, CHC2-type protein) YP_002602021.1 DnaK suppressor protein DksA YP_002602023.1 4-hydroxybutyrate coenzyme A transferase YP_002602024.1 vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase) YP_002602025.1 dimethylamine corrinoid protein YP_002602026.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002602027.1 Choline/glycine/betaine transporter (BCCT transporter) YP_002602028.1 arginine utilization regulatory protein RocR YP_002602029.1 Choline/glycine/betaine transporter (BCCT transporter) YP_002602034.1 GTP-binding protein HflX (GTPase) YP_002602037.1 chorismate mutase/prephenate dehydrogenase; catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis YP_002602039.1 peptidase C56 family protein YP_002602040.1 fructose-bisphosphate aldolase Fba YP_002602041.1 long-chain-fatty-acid--CoA ligase FadD2 (Acetyl-CoA-synthetase) (Acyl-activating enzyme); activates fatty acids by binding to coenzyme A YP_002602045.1 cobalamin receptor protein ButB YP_002602046.1 anaerobic cobalamin biosynthesis Co2+ chelatase CbiK1 YP_002602048.1 anaerobic cobalamin biosynthesis Co2+ chelatase CbiK2 YP_002602049.1 aspartate racemase family protein RacD YP_002602050.1 acetyl-CoA acetyltransferase AtoB1 YP_002602051.1 acyl-CoA dehydrogenase Acd1 YP_002602054.1 anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpA2 YP_002602055.1 anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpB2; sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters YP_002602056.1 heterodisulfide reductase, subunit HdrF2 (selenocysteine containing protein, HdrCB homoloque) YP_002602059.1 universal stress protein UspA3 YP_002602063.1 methyl-accepting chemotaxis protein McpA YP_002602068.1 threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) YP_002602070.1 Choline/glycine/betaine transporter (BCCT transporter) YP_002602078.1 DNA primase DnaG3 (Zinc finger, CHC2-type protein) YP_002602086.1 para-aminobenzoate synthase, component I YP_002602087.1 para-aminobenzoate synthase, component II YP_002602090.1 aspartate aminotransferase AspC (Transaminase A) (ASPAT) YP_002602091.1 phosphoserine phosphatase RsbP (PAS/PAC domain protein) YP_002602093.1 multi-pass membrane protein RarD (eamA transporter family) YP_002602102.1 carboxy-terminal processing protease CtpA [precursor] YP_002602119.1 glutamate/aspartate transport system, ATP-binding protein GltL YP_002602120.1 glutamate/aspartate transport system, permease protein GltK YP_002602121.1 glutamate/aspartate transport system, permease protein GltJ YP_002602122.1 periplasmic solute-binding protein GltB [precursor] (periplasmic glutamate/aspartate binding protein GltB [precursor]) YP_002602125.1 glycolate oxidase, iron-sulfur subunit GlcF YP_002602126.1 FAD/FMN-containing glycolate oxidase, subunit GlcD YP_002602127.1 TRAP-type C4-dicarboxylate permease, large subunit DctM2 YP_002602128.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ2 YP_002602129.1 TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP2 YP_002602138.1 fructose-1,6-bisphosphatase Fbp YP_002602139.1 glucose-1-phosphate adenylyltransferase, large subunit GlgC YP_002602140.1 glyceraldehyde-3-phosphate dehydrogenase Gap (GAPDH) YP_002602141.1 fructose-bisphosphate aldolase Fba; catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_002602142.1 carbohydrate kinase family protein PfkB1 YP_002602144.1 multiphosphoryl transfer protein Mtp (PTS system, EIIA, EIIB, EIII-Fru transfer domains) YP_002602146.1 phosphoglucomutase (Glucose phosphomutase) (PGM); catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_002602147.1 anaerobic C4-dicarboxylate transporter DcuA YP_002602149.1 nitrogen fixation-related protein NifH (4Fe-4S cluster binding protein) YP_002602150.1 nitrogenase associated molybdenum-iron protein, alpha chain NifD YP_002602151.1 bifunctional methionine sulfoxide reductase MsrAB YP_002602152.1 long-chain-fatty-acid-CoA ligase AcsL1 (AMP-binding protein) YP_002602155.1 bifunctional deaminase-reductase/dihydrofolate reductase FolA (DHFR) YP_002602157.1 NADPH-dependent, homotetrameric glutamate synthase GltA YP_002602161.1 4-hydroxybutyrate coenzyme A transferase Cat YP_002602162.1 middle-chain-fatty-acid-acyl-CoA synthetase AcsM1 (AMP-binding protein) YP_002602163.1 acyl-CoA dehydrogenase Acd2 YP_002602165.1 tRNA-dihydrouridine synthase Dhs1 YP_002602174.1 UvrABC system protein A (UvrA protein) (Excinuclease ABC, subunit A) YP_002602177.1 phosphoglycolate phosphatase Gph YP_002602179.1 tRNA-dihydrouridine synthase Dhs2 YP_002602181.1 7-keto-8-aminopelargonate synthetase BioF YP_002602184.1 transcription termination factor Rho YP_002602189.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002602190.1 Choline/glycine/betaine transporter (BCCT transporter) YP_002602192.1 GTP-dependent nucleic acid-binding protein EngD YP_002602197.1 molybdenum cofactor biosynthesis protein B YP_002602198.1 bifunctional regulatory protein PyrR (Pyrimidine operon regulatory protein / Uracil phosphoribosyltransferase) YP_002602199.1 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002602200.1 molybdopterin converting factor, large subunit MoaE YP_002602201.1 molybdenum cofactor biosynthesis protein MoaC YP_002602206.1 D-alanine--D-alanine ligase A (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) YP_002602207.1 phosphoribosylamine--glycine ligase PurD (Glycinamide ribonucleotide synthetase) (GARS) YP_002602227.1 DNA primase DnaG4 (Zinc finger, CHC2-type protein) YP_002602231.1 iron-sulfur binding protein NapH (4Fe-4S ferredoxin) YP_002602233.1 sugar phosphatase NagD YP_002602234.1 phospho-2-dehydro-3-deoxyheptonate aldolase AroH YP_002602235.1 ATP-dependent protease La YP_002602238.1 chromate transport protein ChrA YP_002602239.1 chromate transport protein ChrA YP_002602241.1 UDP-sugar hydrolase / 5'-nucleotidase UshA [precursor] YP_002602243.1 nitrogen fixation-related protein NifH (4Fe-4S cluster binding protein) YP_002602244.1 nitrogen regulatory protein GlnB2 (P-II; transcriptional regulator of glnA) YP_002602245.1 nitrogen regulatory protein GlnB3 (P-II; transcriptional regulator of glnA) YP_002602246.1 nitrogenase associated molybdenum-iron protein, alpha chain NifD YP_002602247.1 nitrogenase associated molybdenum-iron protein, beta chain NifK YP_002602248.1 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE YP_002602249.1 nitrogenase associated molybdenum-iron protein, beta chain NifK YP_002602250.1 molybdenum-iron cofactor biosynthesis protein NifB (radical SAM superfamily) YP_002602251.1 thioredoxin-fold protein Thx (Thioredoxin family protein) YP_002602252.1 Homocitrate synthase NifV YP_002602255.1 chromosome initiation inhibitor IciA (OriC replication inhibitor); specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_002602256.1 L-lysine exporter protein LysE YP_002602257.1 Galactose-1-phosphate uridylyltransferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) YP_002602258.1 ADP-ribosyl-[dinitrogen reductase] glycohydrolase (ADP- ribosylglycohydrolase) (Dinitrogenase reductase activating glycohydrolase) YP_002602259.1 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (ADP-ribosyltransferase) YP_002602261.1 ABC-type molybdate transporter, substrate-binding protein YP_002602262.1 ABC-type molybdate transporter, permease component YP_002602263.1 ABC-type molybdate transporter, ATP binding protein YP_002602267.1 Na+/H+ antiporter NahD YP_002602271.1 acetoacetyl-CoA synthetase (AMP-binding protein) YP_002602273.1 hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) YP_002602274.1 Methylmalonyl-CoA carboxylase (12S subunit) YP_002602276.1 long-chain-fatty-acid-CoA ligase AcsL2 (AMP-binding protein) YP_002602277.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd3 (butyryl-CoA dehydrogenase) YP_002602279.1 methylmalonyl-CoA mutase McmL YP_002602280.1 acetyl-CoA acetyltransferase AtoB2 YP_002602282.1 xaa-pro dipeptidase PepP YP_002602285.1 flavoprotein NADH-dependent oxidoreductase NemA YP_002602292.1 serine/threonine-protein kinase YP_002602294.1 GTPase EngC YP_002602298.1 methyl-accepting chemotaxis protein McpA YP_002602302.1 magnesium and cobalt transport protein CorA YP_002602304.1 DnaJ-like protein YP_002602305.1 integral membrane protein TerC YP_002602306.1 thiol peroxidase Tpx YP_002602307.1 class II fumarate hydratase FumC; class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_002602308.1 nitroreductase NfnB YP_002602310.1 outer membrane phospholipase PldA YP_002602320.1 diacylglycerol kinase DgkA YP_002602327.1 argininosuccinate lyase ArgH YP_002602328.1 diaminopimelate decarboxylase LysA YP_002602337.1 aconitase AcnA (aconitate hydratase; citrate hydro-lyase) YP_002602339.1 diaminopimelate decarboxylase LysA YP_002602341.1 glycerol-3-phosphate dehydrogenase [NAD(P)+] YP_002602349.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd4 (butyryl-CoA dehydrogenase) YP_002602354.1 GTP-binding protein Era YP_002602355.1 GTP-binding protein EngB YP_002602356.1 aspartate aminotransferase AspC; catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_002602357.1 ATP phosphoribosyltransferase HisG; long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_002602358.1 phosphoribosyl-AMP cyclohydrolase HisI YP_002602359.1 penicillin-binding protein 1A [Includes: Penicillin-insensitive transglycosylase ; Penicillin-sensitive transpeptidase ] YP_002602362.1 DnaK suppressor protein DksA YP_002602363.1 glutamyl-tRNA reductase HemA YP_002602364.1 cytochrome c assembly protein CcmC YP_002602365.1 siroheme synthase (uroporphyrin-III C-methyltransferase; precorrin-2 dehydrogenase; sirohydrochlorin ferrochelatase) YP_002602368.1 ferric uptake regulation protein YP_002602369.1 Fe2+ transport system protein FeoB YP_002602375.1 fimbrial assembly membrane protein PilM YP_002602376.1 fimbrial assembly membrane protein PilN YP_002602377.1 fimbrial biogenesis protein PilO YP_002602378.1 fimbrial assembly protein PilP YP_002602379.1 fimbrial biogenesis protein PilQ [precursor] YP_002602382.1 threonine synthase ThrC YP_002602383.1 seryl-tRNA synthetase SerS (Serine--tRNA ligase) (SerRS) YP_002602385.1 potassium channel protein (potassium uptake protein) YP_002602386.1 protein-L-isoaspartate O-methyltransferase YP_002602389.1 substrate-binding transcriptional regulator LysR YP_002602390.1 pantetheine-phosphate adenylyltransferase CoaD (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoApyrophosphorylase); Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002602395.1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (UDP-3-O-acyl-GlcNAc deacetylase); zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_002602397.1 homolog of heat shock protein 33 (chaperonin family protein) YP_002602399.1 indolepyruvate:ferredoxin oxidoreductase, alpha subunit IorA1 YP_002602400.1 indolepyruvate:ferredoxin oxidoreductase, beta subunit IorB1 YP_002602401.1 general secretion pathway protein F YP_002602406.1 general secretion pathway protein E (type II secretion system protein E) YP_002602407.1 general secretion pathway protein D (type II secretion system protein D) YP_002602408.1 general secretion pathway protein C (type II secretion system protein C) YP_002602412.1 general secretion pathway protein K (type II secretion system protein K) YP_002602413.1 general secretion pathway protein GspJ [precursor] YP_002602416.1 general secretion pathway protein G [precursor] YP_002602418.1 menaquinone biosynthesis methyltransferase UbiE YP_002602419.1 heat shock protein DnaJ (chaperone Hsp40); chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_002602420.1 6-pyruvoyl tetrahydrobiopterin synthase PtpS YP_002602421.1 orotate phosphoribosyltransferase PyrE YP_002602422.1 cell-division ATP-binding protein FtsE (ATPase component) YP_002602423.1 cell division membrane protein FtsX (permease component) YP_002602425.1 carboxy-terminal processing protease S41 YP_002602427.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_002602428.1 ribosomal protein L11 methyltransferase PrmA2 YP_002602430.1 Na+ dependent nucleoside transporter NupC (nucleoside cotransporter) YP_002602435.1 hydrogenase expression/formation protein HypC YP_002602436.1 hydrogenase maturation protein HypF YP_002602437.1 hydrogenase expression/formation protein HypD YP_002602438.1 hydrogenase expression/formation protein HypE YP_002602441.1 thioredoxin TrxA YP_002602443.1 hydrogenase expression/formation protein HyaD1 YP_002602444.1 periplasmic [NiFeSe] hydrogenase, large subunit precursor HysA YP_002602445.1 periplasmic [NiFeSe] hydrogenase, small subunit precursor HysB YP_002602446.1 hydrogenase expression/formation protein HyaD2 YP_002602447.1 heterodisulfide reductase HdrA1 (selenocystein protein) YP_002602448.1 F420-non-reducing hydrogenase, iron-sulfur subunit MvhD2 (selenocysteine protein; 4Fe-4S) YP_002602449.1 F420-non-reducing hydrogenase, iron-sulfur subunit mvhG YP_002602450.1 F420-non-reducing hydrogenase, iron-sulfur subunit mvhA YP_002602461.1 heterodisulfide reductase HdrA2 (selenocysteine protein) YP_002602462.1 F420-non-reducing hydrogenase, iron-sulfur subunit MvhD3 (selenocysteine protein; 4Fe-4S) YP_002602463.1 NADH-dependent, cytoplasmic formate dehydrogenase, beta chain FdhB3 (4Fe-4S family protein) YP_002602464.1 NADH-dependent, cytoplasmic formate dehydrogenase, alpha chain FdhA3 (selenocysteine protein) YP_002602468.1 Zn-dependent hydroxyacylglutathione hydrolase GloB YP_002602471.1 middle-chain-fatty-acid-acyl-CoA synthetase AcsM2 (AMP-binding protein) YP_002602473.1 Mg-dependent DNase TatD YP_002602474.1 glycerol-3-phosphate dehydrogenase [NAD(P)+] YP_002602484.1 sensor protein AtoS1 YP_002602492.1 2-isopropylmalate synthase LeuA1 (alpha-IPM synthetase/homocitrate synthase family protein) YP_002602495.1 TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP3 YP_002602496.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ3 YP_002602497.1 TRAP-type C4-dicarboxylate permease, large subunit DctM3 YP_002602502.1 ABC-type histidine transport system, ATPase component HisP YP_002602503.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase); catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_002602504.1 prolyl-tRNA synthetase ProS (Proline--tRNA ligase) (ProRS); catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_002602505.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) (P)ppGpp synthetase) YP_002602506.1 required for 70S ribosome assembly YP_002602508.1 thioredoxin reductase (TRXR) YP_002602509.1 thioredoxin TrxA YP_002602510.1 phosphoribosylglycinamide formyltransferase PurN YP_002602511.1 pheromone shutdown protein TraB YP_002602513.1 DNA polymerase I (POL I) YP_002602515.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_002602516.1 glyceraldehyde-3-phosphate dehydrogenase Gap (GAPDH) YP_002602521.1 Low specificity L-threonine aldolase LtaE YP_002602522.1 bifunctional protein PutA [Includes: Proline dehydrogenase; P5C dehydrogenase] YP_002602523.1 cytochrome-type L-lactate dehydrogenase LldD YP_002602529.1 HTH-type transcriptional regulator (heavy metal / copper efflux protein) YP_002602530.1 site-specific tyrosine recombinase XerD2 (DNA breaking-rejoining enzyme) YP_002602533.1 branched-chain amino acid transport protein AzlC YP_002602541.1 peptidoglycan glycosyltransferase FtsI (Penicillin-binding protein) (PBP) YP_002602542.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase MurE YP_002602543.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase MurF YP_002602544.1 phospho-N-acetylmuramoyl-pentapeptide- transferase MraY; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002602545.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD YP_002602546.1 cell division protein FtsW YP_002602547.1 UDP-N-acetylglucosamine--N-acetylmuramyl- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG YP_002602548.1 UDP-N-acetylmuramate--alanine ligase MurC YP_002602549.1 UDP-N-acetylenolpyruvoylglucosamine reductase MurB YP_002602550.1 cell division protein FtsQ YP_002602551.1 cell division protein FtsA YP_002602552.1 cell division protein FtsZ YP_002602554.1 rRNA methylase TrmH YP_002602556.1 thiosulfate sulfur transferase SseA YP_002602565.1 ABC-type oligopeptide transport system, ATPase component AppF YP_002602566.1 ABC-type oligopeptide transport system, ATP-binding protein AppD YP_002602567.1 ABC-type oligopeptide transport system, permease protein AppC YP_002602568.1 ABC-type oligopeptide transporter, permease protein AppB YP_002602569.1 ABC-type oligopeptide transport system, substrate binding protein AppA YP_002602573.1 peptidoglycan-binding protein LysM YP_002602575.1 Mg/Co/Ni transporter MgtE (CBS domain protein) YP_002602598.1 D-alanine-D-alanine ligase B1 (D-alanylalanine synthetase) (D-Ala-D-Ala ligase) YP_002602599.1 D-alanine--D-alanine ligase B2 (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) YP_002602600.1 L-lysine 2,3-aminomutase KamA YP_002602603.1 high affinity H(+)/ sulfate cotransporter SulP1 (hydrogen/sulfate permease) YP_002602606.1 ATP synthase F1, gamma subunit AtpG1 YP_002602607.1 ATP synthase F1, alpha subunit; produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002602608.1 ATP synthase F1, B subunit YP_002602609.1 ATP synthase F0, C subunit YP_002602610.1 ATP synthase F0, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_002602612.1 ATP synthase F0F1 protein AtpI1 YP_002602613.1 ATP synthase F1, epsilon subunit YP_002602614.1 ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002602618.1 periplasmic ferrichrome-binding protein Fbp (Fe3+-hydroxamate transport system) YP_002602628.1 catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity YP_002602629.1 homoserine dehydrogenase Hom YP_002602630.1 phosphoribosylformylglycinamidine cyclo-ligase PurM (AIRS) YP_002602631.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002602632.1 beta-N-acetylhexosaminidase NagZ YP_002602636.1 L-fuculose phosphate aldolase YP_002602640.1 iron-containing alcohol dehydrogenase IV YP_002602641.1 long-chain-fatty-acid--CoA ligase FadD3 (Acetyl-CoA-synthetase) (Acyl-activating enzyme) YP_002602646.1 NAD/NADP-dependent malate dehydrogenase (malic enzyme) (NAD-ME); malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate YP_002602647.1 ABC-type spermidine/putrescine transporter, ATP-binding protein PotA1; functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase YP_002602648.1 ABC-type spermidine/putrescine transporter, permease protein PotB1 YP_002602649.1 ABC-type spermidine/putrescine transporter, permease protein PotC1; can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component YP_002602650.1 ABC-type spermidine/putrescine transporter, polyamine binding protein PotD1 YP_002602651.1 type II secretion system protein E YP_002602658.1 thiosulfate sulfurtransferase RhdA (Rhodanese-like protein) YP_002602677.1 glutamine transport system, permease protein GlnP2 (His/Glu/Gln/Arg-transporter family protein) YP_002602678.1 glutamine transport system, ATP-binding protein GlnQ2 YP_002602679.1 glutamine transport system, permease protein GlnP3 (His/Glu/Gln/Arg-transporter family protein) YP_002602680.1 glutamine transport system, glutamine-binding protein GlnH1 YP_002602682.1 anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpC YP_002602684.1 ABC-type spermidine/putrescine transporter, polyamine binding protein PotD2 YP_002602685.1 ABC-type spermidine/putrescine transporter, permease protein PotC2 YP_002602686.1 ABC-type spermidine/putrescine transporter, permease protein PotB2 YP_002602687.1 ABC-type spermidine/putrescine transporter, ATP-binding protein PotA2 YP_002602692.1 Uroporphyrinogen decarboxylase HemE (URO-D) YP_002602700.1 molybdenum cofactor biosynthesis protein MoaA YP_002602704.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor4 YP_002602705.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx5 YP_002602706.1 heterodisulfide reductase HdrA3 (first part of two subunit HdrA3) YP_002602707.1 heterodisulfide reductase HdrA3' (second part of two subunit HdrA3) YP_002602708.1 F420-non-reducing hydrogenase, iron-sulfur subunit MvhD4 (4Fe-4S) YP_002602709.1 formate dehydrogenase, beta chain FdhB4 (4Fe-4S family protein) YP_002602710.1 formate dehydrogenase, alpha chain FdhA4 YP_002602713.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor5 YP_002602715.1 DNA polymerase II PolB; Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C YP_002602720.1 lipoprotein-releasing system, ATP-binding protein LolD YP_002602726.1 cytochrome bd-type ubiquinol oxidase, subunit II (CydB) YP_002602727.1 cytochrome bd-type ubiquinol oxidase, subunit I (CydA) YP_002602729.1 3-dehydroquinate synthase AroB; catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_002602730.1 3-demethylubiquinone-9 3-methyltransferase UbiG (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHBmethyltransferase) YP_002602738.1 ATP dependent RNA helicase (DEAD/DEAH box helicase) YP_002602741.1 type I site-specific restriction-modification system, restriction subunit HsdR YP_002602742.1 type I site-specific restriction modification enzyme, methylase subunit HsdM YP_002602743.1 type I site-specific restriction-modification system, specificity subunit HsdS YP_002602760.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx6 YP_002602768.1 oxygen-independent coproporphyrinogen III oxidase (Fe-S oxidoreductase) YP_002602778.1 heavy metal translocating P-type ATPase ZntA YP_002602783.1 cytochrome C oxidase, mono-heme subunit FixO YP_002602784.1 cytochrome C oxidase, polypeptide subunit FixN (cytochrome cbb3, subunit 1) YP_002602786.1 molybdopterin oxidoreductase, membrane subunit MopC YP_002602788.1 molybdopterin oxidoreductase, membrane subunit MopB YP_002602789.1 molybdopterin oxidoreductase, iron-sulfur binding subunit MopA YP_002602790.1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE YP_002602791.1 ubiquinone biosynthesis protein UbiB YP_002602797.1 biotin synthetase (Biotin synthetase) YP_002602798.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd5 (butyryl-CoA dehydrogenase) YP_002602805.1 glutamine transport system, ATP-binding protein GlnQ3 YP_002602806.1 D-cysteine desulfhydrase DcyD; catalyzes the formation of pyruvate from D-cysteine YP_002602808.1 penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) YP_002602809.1 thiamin-phosphate pyrophosphorylase (TMP pyrophosphorylase) (TMP-PPase) YP_002602814.1 iron containing alcohol dehydrogenase Adh1 YP_002602817.1 iron-containing alcohol dehydrogenase Adh2 YP_002602819.1 H(+)/Cl(-) exchange transporter ClcA YP_002602820.1 NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase YP_002602821.1 phosphoglycerate mutase GpmA (Phosphoglyceromutase) (PGAM) YP_002602822.1 pyridoxal kinase PdxK; catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal YP_002602825.1 mechanosensitive small-conductance channel MscC2 YP_002602834.1 pyridoxal phosphate dependent D-cysteine desulfhydrase DcyD; catalyzes the formation of pyruvate from D-cysteine YP_002602844.1 ABC-type phosphate transport system, periplasmic component PstS YP_002602862.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002602864.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002602866.1 anaerobic nitric oxide reductase flavorubredoxin NorV YP_002602868.1 acetyl-CoA hydrolase (acetyl-CoA deacylase) YP_002602871.1 anthranilate phosphoribosyltransferase TrpD YP_002602873.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT YP_002602877.1 Coenzyme A transferase Cat1 YP_002602878.1 acyl-CoA dehydrogenase Acd6 YP_002602879.1 3-hydroxybutyryl-CoA dehydrogenase Hbd1; converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_002602893.1 ABC-type phosphate/phosphonate transport system, periplasmic binding protein PhnD YP_002602897.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA4 (PEP synthase) YP_002602904.1 potassium uptake system, NAD-binding component YP_002602905.1 potassium uptake system, membrane component TrkB (Trk family protein) YP_002602906.1 peptidoglycan-binding protein LysM YP_002602908.1 sodium-driven polar flagellar protein MotA (PomA homolog) YP_002602909.1 flagellar motor protein MotB (PomB homolog) YP_002602910.1 fructose-specific phosphotransferase system protein PtsN1 (PTS system EIIA) YP_002602911.1 voltage gated chloride channel protein EriC YP_002602912.1 universal stress protein UspA4 YP_002602914.1 L-lysine 2,3-aminomutase KamA YP_002602916.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002602918.1 DNA polymerase III, gamma/tau subunits YP_002602921.1 middle-chain-fatty-acid-acyl-CoA synthetase AcsM3 (AMP-binding protein) YP_002602926.1 anti-sigma regulatory factor RsbW2 (serine/threonine protein kinase) YP_002602929.1 NADH-ubiquinone oxidoreductase, 24 kD subunit YP_002602930.1 NADH-quinone oxidoreductase, NADH-binding subunit NuoF YP_002602932.1 carbon monoxide dehydrogenase nickel-insertion accessory protein CooC YP_002602934.1 vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase) YP_002602935.1 bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, gamma subunit CdhE; part of a complex that catalyzes the cleavage of acetyl-CoA YP_002602936.1 bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, beta subunit CdhC; in acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex YP_002602937.1 bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, alpha subunit CdhA (corrinoid/iron-sulfur protein) YP_002602939.1 bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, delta subunit CdhD; part of a complex that catalyzes the cleavage of acetyl-CoA YP_002602940.1 Formate--tetrahydrofolate ligase Fhs (Formyltetrahydrofolate synthetase) (FTHFS); catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate YP_002602941.1 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase / methenyl-tetrahydrofolate cyclohydrolase YP_002602942.1 methenyltetrahydrofolate cyclohydrolase FchA YP_002602943.1 5,10-methylene-tetrahydrofolate reductase MetF2 YP_002602946.1 carbon monoxide dehydrogenase nickel-insertion accessory protein AcsF YP_002602947.1 succinyl-CoA synthetase, alpha subunit SucD3 (SCS-alpha) YP_002602949.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE (CMK) YP_002602950.1 ribose-phosphate pyrophosphokinase PrsA (RPPK) (Phosphoribosylpyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) YP_002602951.1 50S ribosomal protein L25; the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002602952.1 peptidyl-tRNA hydrolase Pth YP_002602954.1 23S RNA-specific pseudouridylate synthase D YP_002602956.1 NADH-dependent, cytoplasmic formate dehydrogenase FdhA5 (selenocysteine protein) YP_002602957.1 NAD-dependent aldehyde dehydrogenase PutA YP_002602958.1 NADH-dependent, cytoplasmic formate dehydrogenase FdhA6 (selenocysteine protein) YP_002602961.1 manganese-dependent inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase); catalyzes the hydrolysis of pyrophosphate to phosphate YP_002602964.1 DNA movement protein/cell devision protein FtsK YP_002602968.1 methyl-accepting chemotaxis protein McpA YP_002602971.1 folylpolyglutamate synthase FolC YP_002602973.1 adenylate kinase (ATP-AMP transphosphorylase); essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002602974.1 transcription termination factor Rho YP_002602975.1 50S ribosomal protein L31 YP_002602976.1 peptide chain release factor 1 (Peptidyl-tRNA hydrolase) YP_002602977.1 protein modification methylase HemK YP_002602978.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002602979.1 translation elongation factor Ts YP_002602980.1 uridylate kinase PyrH (Uridine monophosphate kinase) (UMP kinase) YP_002602981.1 ribosome recycling factor Frr; Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002602982.1 undecaprenyl pyrophosphate synthetase UppS (UPP synthetase) YP_002602983.1 phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) YP_002602984.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) YP_002602986.1 phosphoribosylformylglycinamidine synthase II (FGAM synthase) (FGAMS) YP_002602987.1 phosphoribosylformylglycinamidine synthase I YP_002602999.1 endonuclease I [precursor] YP_002603010.1 adenylosuccinate synthetase PurA; catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_002603015.1 Phosphoenolpyruvate carboxylase (PEPCase) (PEPC) YP_002603016.1 mechanosensitive small-conductance channel MscC3 YP_002603019.1 acyl-CoA dehydrogenase Acd7 YP_002603021.1 phage shock protein PspA (IM30) YP_002603033.1 membrane-bound lytic murein transglycosylase D [precursor] YP_002603034.1 tryptophan biosynthesis protein TrpC (anthranilate synthase complex); monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate YP_002603035.1 anthranilate phosphoribosyltransferase TrpD; Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002603036.1 anthranilate/para-aminobenzoate synthases component II YP_002603037.1 anthranilate synthase component I YP_002603040.1 ATP-dependent protease proteolytic subunit ClpP (Endopeptidase Clp) YP_002603047.1 ATP synthase F0, C subunit YP_002603048.1 ATP synthase F0, A subunit YP_002603050.1 ATP synthase F0F1 protein AtpI2 YP_002603051.1 selenide water dikinase 1 SelD YP_002603056.1 DNA-invertase from transposon Tn552 (site-specific recombinase resolvase family protein) YP_002603060.1 ATP-dependent RNA helicase RhlE YP_002603064.1 nucleoside diphosphate kinase Ndk YP_002603067.1 3-isopropylmalate dehydratase, large subunit leuC1 (alpha-IPM isomerase/aconitase family protein); catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis YP_002603068.1 3-isopropylmalate dehydratase, small subunit leuD1 (alpha-IPM isomerase/aconitase family protein) YP_002603069.1 thymidylate synthase ThyX (TS) (TSase) YP_002603070.1 thiamine pyrophosphokinase ThiN YP_002603075.1 tetraacyldisaccharide 4'-kinase LpxK YP_002603076.1 lipid A biosynthesis lauroyl acyltransferase MsbA YP_002603077.1 lipopolysaccharide biosynthesis glycosyl transferase KdtX YP_002603078.1 CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1 YP_002603080.1 glycosyltransferase RfaG (cell wall biogenesis protein) YP_002603081.1 ADP-heptose synthase/bifunctional sugar kinase/adenylyltransferase HldE YP_002603082.1 CDP-glycerol:glycerophosphate glycerophosphotransferase TagB2 YP_002603088.1 3-deoxy-D-manno-octulosonic acid kinase KdkA (KDO kinase) YP_002603089.1 3-deoxy-manno-octulosonate cytidylyltransferase KdsB (CMP-KDO synthetase) YP_002603093.1 3-deoxy-D-manno-octulosonic-acid transferase KdtA YP_002603094.1 ABC-type lipid transporter, ATP-binding protein MsbA YP_002603096.1 ADP-heptose:LPS heptosyltransferase RfaF (glycosyltransferase family protein) YP_002603097.1 undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase ArnT (Glycosyl transferase, family 39) YP_002603099.1 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ArnC (Glycosyl transferase, group 2 family) YP_002603100.1 glycerol kinase (ATP:glycerol 3-phosphotransferase) (Glycerokinase) YP_002603103.1 ABC-type sugar transporter, permease protein MalK YP_002603104.1 ABC-type sugar transporter, permease protein MalG YP_002603106.1 ABC-type sugar transporter, periplasmic-binding protein MalE YP_002603112.1 guanylate kinase GmK YP_002603114.1 NADP-dependent isocitrate dehydrogenase CitC (Oxalosuccinate decarboxylase) (IDH) YP_002603115.1 competence protein F (Phosphoribosyltransferase family protein) YP_002603117.1 4-oxalocrotonate tautomerase NahJ YP_002603120.1 UvrABC system, excinuclease subunit A YP_002603121.1 pyridoxal phosphate biosynthetic protein PdxA (4-hydroxythreonine-4-phosphate dehydrogenase) YP_002603122.1 bacterial chromosomal replication initiator protein DnaA YP_002603123.1 FAD-linked glycolate oxidase subunit GlcD YP_002603126.1 replicative DNA helicase DnaB YP_002603127.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002603129.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002603130.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002603135.1 serine protease do-like peptidase DegP YP_002603136.1 peptidyl-prolyl cis-trans isomerase PpiD (PPIase D) (Rotamase D) YP_002603139.1 L-asparaginase AspG YP_002603140.1 regulatory protein RecX (RecA activity modulator) YP_002603141.1 similar to acyl-acyl carrier protein thioesterase chloroplast precursor YP_002603144.1 peptidyl-prolyl cis-trans isomerase PpiC YP_002603145.1 tail-specific protease Prc [precursor] (Protease Re) (PRC protein) (C-terminal-processing peptidase) YP_002603152.1 GMP synthase [glutamine-hydrolyzing] GuaA (Glutamine amidotransferase); contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002603153.1 translation elongation factor P (EF-P); Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002603156.1 transmembrane cytochrome c biogenesis protein ResB YP_002603157.1 cytochrome c assembly protein CcmC YP_002603165.1 glycerophosphoryl diester phosphodiesterase GlpQ YP_002603167.1 phosphocarrier protein PtsH (HPr; Histidine-containing protein) YP_002603168.1 phosphoenolpyruvate (PEP)-dependent phosphotransferase PtsA2 (PTS system enzyme I) YP_002603169.1 ssrA-binding protein SmpB (tmRNA binding protein) YP_002603186.1 chromosome partitioning protein parB YP_002603188.1 transposition helper protein IstB (ATP-binding protein) YP_002603193.1 type II secretory pathway, component ExeA (ATPase) YP_002603197.1 HTH-type transcriptional regulator CueR YP_002603200.1 adenylate cyclase CyaA (adenylate cyclase family 3 protein) YP_002603206.1 DNA repair protein RadC YP_002603214.1 type I site-specific restriction modification enzyme, methylase subunit HsdM YP_002603215.1 Type I restriction-modification system, specificity protein HsdS YP_002603216.1 Type I restriction-modification system, R subunit HsdR (helicase) YP_002603232.1 protein GumC involved in exopolysaccharide biosynthesis YP_002603234.1 galactosyl transferase CspE (type III capsular polysaccharide synthesis) YP_002603239.1 site-specific tyrosine recombinase XerD3 (DNA breaking-rejoining enzyme) YP_002603251.1 teichuronic acid biosynthesis glycosyl transferase TuaH YP_002603260.1 RfaL protein (O-antigen ligase family protein) YP_002603262.1 glycosyl-/hexosyl-transferase RfaG YP_002603266.1 carbamoyl-phosphate synthase, large subunit CarB1 YP_002603269.1 zinc-dependent and D-specific aminopeptidase DppA YP_002603273.1 capsular biosynthesis protein CapA (poly-gamma-glutamate biosynthesis) YP_002603274.1 dihydroorotate dehydrogenase, electron transfer subunit PyrK YP_002603275.1 cysteine synthase CysK (pyridoxal-phosphate dependent enzyme) YP_002603277.1 transposase/integrase IstA (IS 21 family protein) YP_002603278.1 bifunctional cysteinyl-tRNA synthetase CysS1 (Cysteine--tRNA ligase) (CysRS) YP_002603284.1 ABC-type lipoprotein transporter, ATP binding component LolD (ATPase) YP_002603285.1 ABC-type lipoprotein transporter, permease protein LolE YP_002603286.1 outer membrane lipoprotein-sorting protein LolF YP_002603296.1 glyoxylate reductase GyaR YP_002603299.1 histidinol-phosphate aminotransferase HisC YP_002603300.1 glutamine transport system, glutamine-binding protein GlnH2 YP_002603301.1 glutamine transport system, permease protein GlnP4 (His/Glu/Gln/Arg-transporter family protein) YP_002603302.1 glutamine transport system, ATP-binding protein GlnQ4 YP_002603303.1 glutamine transport system, permease protein GlnP5 (His/Glu/Gln/Arg-transporter family protein) YP_002603304.1 glycolate oxidase, FAD-linked subunit GlcD YP_002603305.1 glycolate oxidase, iron-sulfur subunit GlcF YP_002603307.1 long-chain-fatty-acid--CoA ligase FadD4 (Acetyl-CoA-synthetase) (Acyl-activating enzyme) YP_002603310.1 glutamate-1-semialdehyde 2,1-aminomutase HemL; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002603311.1 murein-peptide ligase (UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase) YP_002603331.1 DNA repair protein RadC YP_002603334.1 DNA primase DnaG10 (Zinc finger, CHC2-type protein) YP_002603352.1 Valyl-tRNA synthetase ValS YP_002603354.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002603357.1 universal stress protein UspA YP_002603358.1 2-isopropylmalate synthase LeuA2 (alpha-IPM synthetase/homocitrate synthase family protein) YP_002603359.1 2-isopropylmalate synthase LeuA3 (alpha-IPM synthetase/homocitrate synthase family protein) YP_002603360.1 acetolactate synthase, small regulatory small subunit IlvH YP_002603361.1 acetolactate synthase, large subunit IlvG YP_002603362.1 dihydroxy-acid dehydratase IlvD YP_002603363.1 N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) mutase PurE YP_002603368.1 ABC-type molybdenum transporter, ATP-binding protein ModF YP_002603369.1 ketol-acid reductoisomerase IlvC; catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002603370.1 HTH-type transcriptional activator protein IlvY; participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate YP_002603371.1 long-chain-fatty-acid--CoA ligase FadD5 (Acetyl-CoA-synthetase) (Acyl-activating enzyme) YP_002603390.1 ABC-type branched chain amino acid transporter, periplasmic amino acid-binding protein LivJ YP_002603391.1 ABC-type branched chain amino acid transporter, permease protein LivH YP_002603392.1 ABC-type branched chain amino acid transporter, permease protein LivM YP_002603393.1 ABC-type branched chain amino acid transporter, ATP-binding protein LivG YP_002603394.1 ABC-type branched chain amino acid transporter, ATP-binding protein LivF YP_002603395.1 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase Mip (rotamase) YP_002603396.1 hydroxymethylglutaryl-CoA lyase MvaB YP_002603402.1 long-chain-fatty-acid--CoA ligase FadD6 (Acetyl-CoA-synthetase) (Acyl-activating enzyme) YP_002603406.1 chaperone protein DnaJ YP_002603409.1 indolepyruvate:ferredoxin oxidoreductase, alpha subunit IorA2 YP_002603410.1 indolepyruvate:ferredoxin oxidoreductase, beta subunit IorB2 YP_002603411.1 phenylacetate-coenzyme A ligase PaaK1 (Phenylacetyl-CoA ligase) (PA-CoA ligase) YP_002603412.1 TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP4 YP_002603413.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ4 YP_002603414.1 TRAP-type C4-dicarboxylate permease, large subunit DctM4 YP_002603415.1 isoaspartyl dipeptidase IadA YP_002603416.1 ABC-type oliopeptide/dipeptide transporter, ATP-binding protein DppD YP_002603417.1 ABC-type oliopeptide/dipeptide transporter, periplasmic binding protein DppA YP_002603418.1 ABC-type oliopeptide/dipeptide transporter, permease protein DppB YP_002603419.1 ABC-type oliopeptide/dipeptide transporter, permease protein DppC YP_002603421.1 D-alanine aminotransferase Dat YP_002603426.1 dTDP-4-dehydrorhamnose reductase RfbD YP_002603427.1 glycogen phosphorylase GlgP YP_002603431.1 single-stranded-DNA-specific exonuclease RecJ YP_002603433.1 tRNA-i(6)A37 modification enzyme MiaB YP_002603434.1 methionine aminopeptidase MAP (Peptidase M) YP_002603435.1 carbon starvation protein CstA YP_002603438.1 anion transporting ATPase ArsA YP_002603440.1 fosmidomycin resistance protein Fsr YP_002603445.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis YP_002603447.1 translation elongation factor FusA (GTPase) YP_002603451.1 fructose-1,6-bisphosphatase GlpX (D-fructose-1,6-bisphosphate 1-phosphohydrolase class II) (FBPase II); type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_002603455.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA; adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002603456.1 DNA internalization-related competence protein ComE YP_002603464.1 VacJ lipoprotein [precursor] YP_002603466.1 heme d1 biosynthesis protein NirD [precursor] YP_002603467.1 dissimilatory sulfite reductase complex, gamma subunit DsrC (Hydrogensulfite reductase gamma subunit) YP_002603468.1 dissimilatory sulfite reductase complex, beta subunit DsrB1 (Hydrogensulfite reductase beta subunit) YP_002603469.1 dissimilatory sulfite reductase complex, alpha subunit DsrA1 (Hydrogensulfite reductase alpha subunit) YP_002603470.1 formate dehydrogenase, beta chain FdhB5 (4Fe-4S family protein) YP_002603471.1 F420-non-reducing hydrogenase, iron-sulfur subunit MvhD5 (selenocysteine protein; 4Fe-4S) YP_002603472.1 heterodisulfide reductase / glutamate synthase fusion protein HdrL1 (selenocysteine protein) YP_002603473.1 tRNA delta(2)-isopentenylpyrophosphate transferase MiaA (IPP transferase) YP_002603474.1 ATP-dependent phosphofructokinase PfkA1 YP_002603475.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate YP_002603476.1 arabinose 5-phosphate isomerase KdsD YP_002603478.1 aspartate aminotransferase (Transaminase A) (AspAT) YP_002603479.1 voltage-gated chloride channel protein EriC YP_002603480.1 tRNA pseudouridine synthase TruA YP_002603481.1 bifunctional arginine biosynthesis protein ArgJ YP_002603482.1 ribosomal pseudouridylate synthase, large subunit RluB (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (Uracil hydrolyase) YP_002603488.1 hyaluronan synthase HasA YP_002603492.1 tryptophanyl-tRNA synthetase TrpS (Tryptophan--tRNA ligase) (TrpRS) YP_002603495.1 type IV pilus assembly protein PilC YP_002603497.1 periplasmic [NiFe] hydrogenase, small subunit HynB YP_002603498.1 periplasmic [NiFe] hydrogenase, large subunit HynA YP_002603499.1 [NiFe] hydrogenase, maturation factor HynC YP_002603500.1 lysyl-tRNA synthetase LysS (Lysine--tRNA ligase) (LysRS) YP_002603501.1 lipoprotein ABC transporter, permease protein LolC YP_002603502.1 lipoprotein ABC transporter, ATP-binding protein LolD YP_002603505.1 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase LpxD YP_002603506.1 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase LpxA YP_002603508.1 lipid A disaccharide synthase LpxB YP_002603510.1 chorismate mutase/prephenate dehydratase PheA (Includes: chorismate mutase; prephenate dehydratase) YP_002603511.1 shikimate 5-dehydrogenase AroE YP_002603512.1 3-phosphoshikimate 1-carboxyvinyltransferase AroA(5- enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase); catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002603513.1 shikimate kinase AroL YP_002603514.1 chorismate synthase AroC (5-enolpyruvylshikimate-3-phosphate phospholyase); catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002603517.1 ATP-dependent protease La YP_002603519.1 ABC-type thiamine transporter, periplasmic substrate-binding protein TbpA YP_002603520.1 ABC-type thiamine transporter, permease protein ThiP YP_002603522.1 glycerol-3-phosphate dehydrogenase GlpA YP_002603526.1 acetoin dehydrogenase E1, beta subunit AcoB YP_002603527.1 acetoin dehydrogenase E1, alpha subunit AcoA YP_002603531.1 heterodisulfide reductase / glutamate synthase fusion protein HdrL2 YP_002603532.1 F420-non-reducing hydrogenase, iron-sulfur subunit MvhD6 (4Fe-4S) YP_002603533.1 formate dehydrogenase, beta chain FdhB6 (4Fe-4S family protein) YP_002603534.1 heterodisulfide reductase - response regulator receiver fusion protein HdrA4 YP_002603535.1 heterodisulfide reductase, subunit HdrD2 (HdrC homologue protein) YP_002603536.1 heterodisulfide reductase, subunit HdrD2' (HdrB homologue protein) YP_002603541.1 glutamine-hydrolyzing asparagine synthetase AsnB YP_002603542.1 mandelate racemase MdlA YP_002603545.1 mechanosensitive small-conductance channel MscC4 YP_002603549.1 Na+/H+ antiporter (TrkA-N:TrkA-C) YP_002603550.1 D-tyrosyl-tRNA(Tyr) deacylase Dtd YP_002603551.1 phosphate sodium symporter Pit (Pho4 transporter family) YP_002603554.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA5 (PEP synthase) YP_002603556.1 acyl-CoA dehydrogenase Acd8 YP_002603558.1 glutamine transport system, glutamine-binding protein GlnH3 YP_002603559.1 glutamine transport system, permease protein GlnP6 (His/Glu/Gln/Arg-transporter family protein) YP_002603560.1 glutamine transport system, ATP-binding protein GlnQ5 YP_002603562.1 type II secretory pathway, component ExeA (ATPase) YP_002603563.1 dTDP-glucose 4,6-dehydratase RfbB YP_002603564.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA6 (PEP synthase); catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002603567.1 type IV pilus biogenesis protein PilB YP_002603568.1 UDP-N-acetylglucosamine 2-epimerase WecB (UDP-GlcNAc-2- epimerase) YP_002603569.1 NAD-binding UDP-glucose 6-dehydrogenase WecC (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) YP_002603570.1 UDP-glucose 4-epimerase IspL (Galactowaldenase) (UDP-galactose 4-epimerase) YP_002603573.1 nucleotide-binding protein Maf (septum formation inhibitor MaF) YP_002603574.1 rubrerythrin Rbr YP_002603575.1 ATP-dependent RNA helicase RhlE YP_002603578.1 cobalamin (vitamin B12) biosynthesis protein, predicted accessory protein CbiP YP_002603579.1 cobalamin (vitamin B12) biosynthesis protein CbiM YP_002603580.1 ABC-type cobalt importer, accessory protein CbiN (transmembrane protein) YP_002603581.1 ABC-type cobalt importer, permease protein CbiQ1 YP_002603582.1 ABC-type cobalamin importer, ATP-binding protein CbiO1 YP_002603583.1 adenosylhomocysteinase AdcY (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase); catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_002603584.1 S-adenosylmethionine synthetase MetK (Methionine adenosyltransferase) (AdoMet synthetase) (MAT); catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002603587.1 glutamyl-tRNA(Gln) amidotransferase, subunit GatA (Glu-ADT, subunit A) YP_002603588.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF YP_002603589.1 cysteinyl-tRNA synthetase CysS2 (Cysteine--tRNA ligase) (CysRS) YP_002603590.1 glutaminyl-tRNA synthetase GlnS (Glutamine-tRNA ligase) (GlnRS); catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002603591.1 UvrABC system protein, excinuclease UvrB (excinuclease ABC, subunit B) YP_002603592.1 UvrABC system protein, excinuclease UvrC (excinuclease ABC, subunit C); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002603594.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function YP_002603595.1 DNA topoisomerase IV, subunit A; decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002603596.1 DNA topoisomerase IV, subunit B; decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002603598.1 adenylate cyclase CyaA (ATP pyrophosphate-lyase) (Adenylyl cyclase) YP_002603599.1 DNA modification methylase MthZ (N-4 cytosine-specific methyltransferase) YP_002603603.1 predicted ATP-dependent protease LonB (peptidase S16) YP_002603604.1 predicted ATP-dependent exodeoxyribonuclease/helicase fusion protein RecD-N:TraA-C YP_002603605.1 cold shock protein CspB YP_002603607.1 translation elongation factor EF-P YP_002603608.1 haloalkane dehalogenase DhaH YP_002603609.1 3-oxoacyl-acyl carrier synthase III FabH1; FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_002603614.1 molybdopterin converting factor, small subunit MoeD YP_002603615.1 molybdopterin biosynthesis protein MoeB YP_002603617.1 ornithine aminotransferase RocD YP_002603619.1 alpha-1,4 glucan phosphorylase GlgP YP_002603620.1 glycogen synthase GlgA (Starch [bacterial glycogen] synthase) YP_002603621.1 1,4-alpha-glucan branching enzyme GlgB (Starch branching enzyme IIB) YP_002603629.1 nitroreductase NfnB YP_002603632.1 lactoylglutathione lyase IguL YP_002603633.1 thiol peroxidase TpxA (Scavengase P20) YP_002603635.1 universal stress protein UspA5 YP_002603636.1 electron transport complex protein Rnf YP_002603637.1 electron transport complex protein Rnf YP_002603638.1 electron transport complex protein Rnf YP_002603639.1 electron transport complex protein Rnf YP_002603640.1 electron transport complex protein Rnf YP_002603641.1 electron transport complex protein Rnf (Na+-transporting NADH:ubiquinone oxidoreductase) YP_002603644.1 DNA primase DnaG7 (Zinc finger, CHC2-type protein) YP_002603648.1 4-hydroxybutyrate coenzyme A transferase Cat2 (acetyl-CoA hydrolase/transferase family protein) YP_002603650.1 phenylacetate-coenzyme A ligase PaaK2 (Phenylacetyl-CoA ligase) (PA-CoA ligase) YP_002603651.1 3-hydroxybutyryl-CoA dehydratase CrtA (Crotonase) YP_002603652.1 N-acetylmuramoyl-L-alanine amidase A YP_002603653.1 This protein performs the mismatch recognition step during the DNA repair process YP_002603655.1 related to metalloendopeptidases YP_002603659.1 dGTP-triphosphohydrolase Dgt (deoxyguanosinetriphosphate triphosphohydrolase protein, dGTPase) YP_002603660.1 similar to nucleotide-binding proteins, NBPs YP_002603663.1 alternative RNA polymerase sigma-32 factor RpoH YP_002603664.1 phage shock protein PspA1 YP_002603666.1 DNA-3-methyladenine glycosylase I (3-methyladenine-DNA glycosidase I) (TAG I) YP_002603668.1 transcriptional catabolite gene activator and regulator Crp (cNTP-binding protein) YP_002603669.1 iron-sulfur flavoprotein Isf YP_002603673.1 major cold-shock protein CspA YP_002603674.1 alpha-1,4 glucan phosphorylase GlgP YP_002603678.1 Na+/H+ -glutamate symporter GltT (Na+/H+-dicarboxylate symporter) YP_002603679.1 two-component DNA-binding response regulator LuxR YP_002603682.1 Na+/solute-dependent symporter PutP (Na(+)-dependent symporter) YP_002603685.1 carbohydrate kinase family protein PfkB2 YP_002603687.1 sucrose phosphate synthase (HAD-superfamily) YP_002603709.1 aminopeptidase PepN (Alpha-aminoacylpeptide hydrolase) YP_002603714.1 branched-chain amino acid aminotransferase IlvE YP_002603717.1 acetoin utilization protein AcuB YP_002603718.1 heavy-metal cation transporter ZupT YP_002603720.1 adenine deaminase AdeC YP_002603721.1 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase ManC YP_002603724.1 universal stress protein UspA YP_002603726.1 heat shock protein DnaJ (TPR repeat protein, chaperone) YP_002603727.1 dihydrodipicolinate reductase DapB (DHPR) YP_002603729.1 glycerol-3-phosphate acyltransferase PlsB (GPAT) YP_002603731.1 ribonuclease HI (RNase HI) YP_002603733.1 histidinol-phosphate aminotransferase HisC (Imidazole acetol- phosphate transaminase); catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002603734.1 cytidine monophosphate kinase Cmk YP_002603735.1 30S ribosomal protein S1 YP_002603736.1 signal peptide peptidase SppA YP_002603738.1 inosine-5'-monophosphate dehydrogenase GuaB (IMP dehydrogenase) (IMPDH) (IMPD) YP_002603739.1 DNA polymerase III, alpha subunit DnaE YP_002603740.1 osmotically inducible protein OsmY YP_002603742.1 DnaJ-like protein DjlA YP_002603743.1 carboxylesterase EstA [precursor] YP_002603745.1 translation elongation factor FusA (GTPase); EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002603746.1 S-adenosylmethionine-dependent methyltransferase GidB (glucose inhibited division protein B) YP_002603747.1 isoleucyl-tRNA synthetase IleS (Isoleucine--tRNA ligase) YP_002603748.1 lipoprotein signal peptidase LspA (SPase II) YP_002603749.1 prolipoprotein diacylglyceryl transferase Lgt YP_002603750.1 DNA polymerase III, delta subunit YP_002603751.1 pyruvate kinase (PK); catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002603753.1 lipoic acid synthetase LipA (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein LipA); catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002603754.1 lipoate-protein ligase LipB (lipoyltransferase) YP_002603755.1 glycine cleavage system, dehydrogenase subunit GcvP2; acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002603756.1 glycine cleveage system, dehydrogenase subunit GcvP1; acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_002603757.1 glycine cleavage system, lipoate-binding subunit GvcH YP_002603758.1 glycine cleavage system, aminomethyltransferase protein GvcT YP_002603759.1 lipoamide dehydrogenase LpdA (pyruvate dehydrogenase complex, E3 component) YP_002603761.1 ABC-type high affinity branched-chain amino acid transporter, ATP-binding protein LivF (ATPase) YP_002603762.1 ABC-type high affinity branched-chain amino acid transporter, ATP-binding component LivG YP_002603763.1 ABC-type high affinity branched-chain amino acid transporter, permease protein LivM YP_002603764.1 ABC-type high affinity branched-chain amino acid transporter, permease protein LivH YP_002603765.1 ABC-type high affinity branched-chain amino acid transporter, periplasmic substrate-binding protein LivK YP_002603766.1 ATP-dependent two-component protease ClpB (ATP-binding-N/ATPAse-C) YP_002603769.1 K+/Na+/Ca2+ antiporter KncA (cation antiporter, CaCA family-protein) YP_002603770.1 3-oxoacyl-acyl carrier synthase III FabH2 YP_002603771.1 N-acetylglucosamine-1-phosphate uridyltransferase GlmU YP_002603772.1 phosphoglucosamine mutase GlmM YP_002603774.1 bifunctional sulfate adenyltransferase Sat1 (ATP sulfurylase (SUL) / adenylylsulfate kinase (KIN) domain) YP_002603778.1 adenylylsulphate kinase CysC YP_002603781.1 glucose-1-phosphate thymidylyltransferase RfbA1, long form YP_002603782.1 dTDP-4-dehydrorhamnose 3,5-epimerase RfbC1 (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase) YP_002603784.1 glucose-1-phosphate thymidylyltransferase RfbA2, long form YP_002603785.1 dTDP-4-dehydrorhamnose 3,5-epimerase RfbC2 (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase) YP_002603792.1 serine O-acetyltransferase CysE2 (bacterial transferase hexapeptide repeat family) YP_002603804.1 undecaprenyl-phosphate (UDP)-galactose-phosphotransferase RfbP (Galactosyl-P-P-undecaprenol synthetase) YP_002603811.1 ABC-type transporter, ATP-binding protein MsbA YP_002603814.1 periplasmic exopolysaccharide export protein GumA YP_002603815.1 exopolysaccharide biosynthesis protein GumC (tyrosine-protein kinase) YP_002603823.1 exo-deoxyribonuclease VII, large subunit XseA YP_002603824.1 exo-deoxyribonuclease VII, small subunit XseB YP_002603826.1 deoxyxylulose-5-phosphate synthase Dxs YP_002603828.1 translation elongation factor FusA (GTPase) YP_002603829.1 3-oxoacyl (acyl-carrier protein) reductase FabG4 YP_002603835.1 phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (SAICAR synthetase) YP_002603837.1 membrane-bound heme containing protein TmcC1 YP_002603838.1 cytoplasmic Fe-S oxidoreductase (4Fe-4S ferredoxin) YP_002603839.1 acidic type II cytochrome TmcA1 (TpII-c3) YP_002603848.1 DNA topoisomerase III YP_002603852.1 3-oxoacyl (acyl-carrier protein) reductase FabG5 YP_002603853.1 monofunctional biosynthetic peptidoglycan transglycosylase MtgA YP_002603873.1 DNA primase DnaG8 (Zinc finger, CHC2-type protein) YP_002603882.1 DNA excision repair system, helicase subunit UvrB1 YP_002603883.1 DNA excision repair system, UvrB2 protein (Excinuclease ABC, subunit B2) YP_002603884.1 DNA excision repair system, UvrB3 protein (Excinuclease ABC, subunit B3) YP_002603885.1 DNA excision repair system, UvrB4 protein (UvrC binding protein) YP_002603892.1 phage-specific tyrosine recombinase/integrase XerC YP_002603896.1 group II intron-encoded protein LtrA (Includes: Reverse-transcriptase; RNA maturase ; DNA endonuclease) YP_002603906.1 exodeoxyribonuclease V, alpha subunit recD YP_002603907.1 exodeoxyribonuclease V, beta subunit RecB YP_002603908.1 exodeoxyribonuclease V, gamma subunit RecC YP_002603910.1 23S RNA-specific pseudouridylate synthase D YP_002603912.1 ATP-dependent helicase HrpB YP_002603913.1 sulfonate ABC-type transporter, ATP-binding protein SsuB YP_002603914.1 sulfonate ABC-type transporter Ssu, permease protein SsuC YP_002603915.1 sulfonate ABC-type transporter Ssu, periplasmic substrate-binding protein SsuA YP_002603916.1 Fe-only fusion hydrogenase HydA2 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain) YP_002603917.1 NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain YP_002603918.1 SAM-dependent methyltransferase, related to tRNA (uracil-5-)-methyltransferase TrmA YP_002603919.1 competence-damaged inducible protein CinA (molybdenum cofactor protein) YP_002603921.1 N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (N- acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) YP_002603923.1 preprotein translocase, subunit SecA YP_002603924.1 ATP-dependent Clp protease adaptor protein ClpS YP_002603925.1 ATP-dependent Clp protease, ATP-binding subunit ClpA YP_002603926.1 leucyl/phenylalanyl-tRNA--protein transferase L/F- transferase) (Leucyltransferase) (Phenyalanyltransferase) YP_002603927.1 universal stress protein UspA6 YP_002603932.1 cysteinyl-tRNA synthetase CysS3 (cysteine--tRNA ligase) (CysRS) YP_002603933.1 thymidylate kinase Tmk (dTMP kinase) YP_002603934.1 organic solvent tolerance protein OstA precursor YP_002603936.1 integration host factor, beta subunit IhfB YP_002603937.1 DNA polymerase III, delta prime subunit HolB YP_002603939.1 methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS); methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_002603940.1 penicillin-binding protein A [Includes: Penicillin-insensitive transglycosylase (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (DD-transpeptidase)] YP_002603941.1 glucosamine--fructose-6-phosphate aminotransferase (D-fructose-6- phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) YP_002603942.1 CTP synthase PyrG (CTP synthetase); CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002603943.1 enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydrolyase); enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002603945.1 UDP-glucose 4-epimerase GalE YP_002603947.1 ribosomal protein S6 modification protein RimK YP_002603950.1 Biotin--[acetyl-CoA-carboxylase] synthetase (Biotin--protein ligase)] YP_002603952.1 ABC-type cobalt importer, ATP-binding protein CbiO2 YP_002603953.1 ABC-type cobalt importer, permease protein CbiQ2 YP_002603954.1 riboflavin biosynthesis protein RibF [Includes: Riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)] YP_002603955.1 N-formylmethionyl-tRNA deformylase Def (Polypeptide deformylase) YP_002603956.1 methionyl-tRNA formyltransferase Fmt YP_002603957.1 ribosomal RNA small subunit methyltransferase RsmB (rRNA (cytosine-C(5)-)-methyltransferase) YP_002603958.1 ribulose-phosphate 3-epimerase Rpe (pentose-5-phosphate 3-epimerase) YP_002603959.1 3-dehydroquinate dehydratase AroQ (3-dehydroquinase) (Type II DHQase); catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_002603965.1 adenylosuccinate lyase PurB; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002603966.1 acyl-CoA dehydrogenase Acd9 YP_002603967.1 integration host factor, alpha subunit IhfA YP_002603968.1 methylamine utilization protein MauE YP_002603971.1 homolog of cell division protein FtsB YP_002603972.1 virulence factor-like membrane protein MviN YP_002603973.1 30S ribosomal protein S20 YP_002603975.1 leucyl-tRNA synthetase LeuS (Leucine--tRNA ligase) YP_002603976.1 ribonuclease E (RNase E) YP_002603979.1 preprotein translocase, subunit SecD YP_002603980.1 preprotein translocase, subunit SecF; forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_002603982.1 DNA processing protein DprA (Rossmann fold nucleotide-binding protein) YP_002603983.1 DNA topoisomerase I YP_002603984.1 outer membrane protein OmpA [precursor] YP_002603985.1 SAM-dependent methyltransferase PrmA (ribosomal protein L11 methyltransferase) YP_002603989.1 alanyl-tRNA synthetase AlaS; Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002603990.1 Recombinase A YP_002603991.1 phosphatidyl-glycerophosphatase PgpA YP_002603993.1 peptidase T, tripeptide aminopeptidase PepT (Aminotripeptidase) (Tripeptidase) YP_002603995.1 TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP5 YP_002603996.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ5 YP_002603997.1 TRAP-type C4-dicarboxylate permease, large subunit DctM5 YP_002603998.1 3-oxoacyl-(acyl-carrier protein) reductase FabG6 (selenocysteine protein) YP_002604004.1 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PgsA YP_002604005.1 transaldolase TalC YP_002604006.1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK YP_002604008.1 argininosuccinate lyase ArgH (Arginosuccinase) (ASAL) YP_002604009.1 argininosuccinate synthase ArgG (Citrulline--aspartate ligase); catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002604010.1 ornithine carbamoyltransferase ArgF (OTCase) YP_002604011.1 acetylornithine/succinyldiaminopimelate aminotransferase ArgD (ACOAT) YP_002604012.1 acetylglutamate kinase ArgB (AGK) (NAG kinase) (N-acetyl-L-glutamate 5-phosphotransferase) YP_002604013.1 ATP-dependent protease HslUV, ATP-binding subunit HslU; heat shock protein involved in degradation of misfolded proteins YP_002604014.1 ATP-dependent protease HslUV, protease subunit HslV; heat shock protein involved in degradation of misfolded proteins YP_002604017.1 bifunctional phosphopantothenoyl-cysteine decarboxylase (PPCDC)(CoaC) / phosphopantothenate-cysteine ligase (PPCS)(CoaB) YP_002604019.1 Tfp (Type IV pili) assembly protein PilY1 YP_002604020.1 Tfp (Type IV pili) assembly protein PilX YP_002604021.1 Tfp (Type IV pili) assembly protein PilV YP_002604022.1 Tfp (Type IV pili) assembly protein PilW YP_002604023.1 Tfp (Type IV pili) assembly / biogenesis protein FimT YP_002604031.1 multifunctional complex type dihydroorotase PyrC (DHOase) YP_002604032.1 aspartate carbamoyltransferase PyrB; catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_002604033.1 signal peptidase I (SPase I) YP_002604036.1 2-dehydro-3-deoxyphosphooctonate aldolase KdsA YP_002604037.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC YP_002604041.1 RNA polymerase sigma-54 factor RpoN YP_002604042.1 sigma-54 modulation protein SmpA (ribosomal protein S30AE family protein) YP_002604043.1 fructose-specific phosphotransferase system protein PtsN2 (PTS system EIIA) YP_002604045.1 phosphotransferase system (PTS), fructose-specific phosphotransferase component ManX (EIIAB) YP_002604046.1 glyceraldehyde-3-phosphate dehydrogenase Gap (GAPDH) YP_002604047.1 triose-phosphate isomerase Tpi (TIM) YP_002604048.1 preprotein translocase, subunit SecG YP_002604050.1 ATP-dependent Clp protease, ATP-binding subunit ClpX YP_002604051.1 coenzyme PQQ synthesis protein PpqE (Radical SAM superfamily) YP_002604052.1 delta-aminolevulinic acid dehydratase HemB (porphobilinogensynthase); catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002604053.1 coenzyme PQQ synthesis protein PpqE (Radical SAM superfamily) YP_002604054.1 pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfb YP_002604056.1 signal recognition particel protein Srp (srp54 domain protein) YP_002604063.1 NAD-dependent DNA ligase LigA YP_002604066.1 glycyl-tRNA synthetase, beta chain GlyS YP_002604067.1 glycyl-tRNA synthetase, alpha chain GlyQ; glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002604069.1 DNA repair protein RecO YP_002604070.1 magnesium transport protein MgtE YP_002604071.1 peptidyl-prolyl cis-trans isomerase protein PpiD YP_002604072.1 parvulin-like peptidyl-prolyl isomerase protein PpiC YP_002604074.1 ATP-dependent transcription-repair coupling factor Mfd (TRCF) YP_002604079.1 membrane-localized lactate dehydrogenase LdhB (GlcF homolog, iron-sulfur cluster-binding protein) YP_002604080.1 membrane-localized lactate dehydrogenase LdhA (GlcD homolog protein) YP_002604083.1 L-lactate permease LldP YP_002604085.1 heterodisulfide reductase, subunit HdrD3 (HdrCB homologue protein) YP_002604087.1 3,4-dihydroxy-2-butanone 4-phosphate riboflavin biosynthesis synthase RibB YP_002604097.1 sodium/alanine- (Na+/Ala- ) symporter AlsT YP_002604098.1 guanine/cytosine deaminase related protein GuaD YP_002604102.1 ABC-type phosphate transport system, substrate-binding protein PstS YP_002604103.1 ABC-type phosphate transport system, permease protein PstC YP_002604104.1 ABC-type phosphate transport system, permease protein PstA YP_002604105.1 ABC-type phosphate transport system, ATP-binding protein PstB (ATPAse) YP_002604107.1 peptidyl-prolyl cis-trans isomerase PpiB YP_002604111.1 ABC-type dipeptide/oligopeptide/nickel transport system, ATP binding component DppF YP_002604112.1 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component DppD YP_002604113.1 ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic binding protein DppE YP_002604115.1 chemotaxis protein MotA (motility protein A) YP_002604116.1 chemotaxis protein motB (Motility protein B) YP_002604118.1 DNA polymerase IV protein DinP YP_002604121.1 long-chain acyl-CoA synthetase (AMP-forming) Faa YP_002604124.1 acetyl-CoA synthetase/acetate-CoA ligase AcsA1 (AMP-binding protein) YP_002604125.1 acetyl-CoA synthetase/acetate-CoA ligase AcsA2 (AMP-binding protein) YP_002604126.1 oxalate/formate antiporter OxlT YP_002604129.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein VdcC YP_002604134.1 acetoin utilization protein AcuC YP_002604135.1 acetoin utilization protein AcuB YP_002604136.1 chaperone hsp70 family protein DnaK YP_002604141.1 arginase family protein ArgA YP_002604146.1 molybdopterin biosynthesis protein MoeB YP_002604151.1 potassium efflux system KefA YP_002604152.1 glycogen synthase GlgA YP_002604153.1 glucose-1-phosphate adenylyltransferase GlgC YP_002604155.1 acetolactate synthase, large subunit IlvB YP_002604158.1 sarcosine oxidase, subunit beta SoxB YP_002604159.1 sarcosine oxidase, subunit alpha SoxA YP_002604160.1 opine oxidase, subunit alpha OoxA YP_002604162.1 rubrerythrin (Rubredoxin-type Fe(Cys)4 protein) YP_002604164.1 PLP-dependent aminotransferase PatB YP_002604170.1 aspartate-semialdehyde dehydrogenase Asd; catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_002604171.1 serine protein kinase PrkA YP_002604175.1 serine protein kinase PrkA YP_002604180.1 3-oxoacyl (acyl-carrier protein) reductase FabG7 YP_002604182.1 L-lysine 2,3-aminomutase YodO YP_002604183.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD YP_002604186.1 FeS assembly ATPase SufC YP_002604189.1 RNA polymerase sigma factor RpoD YP_002604190.1 DNA primase DnaG9 (Zinc finger, CHC2-type protein) YP_002604191.1 imidazoleglycerol-phosphate dehydratase HisB (IGPD) YP_002604193.1 ribosomal protein S6 modification protein RimK YP_002604194.1 tetrahydromethanopterin:alpha-L-glutamate ligase MptN (H(4)MPT:alpha-L-glutamate ligase) YP_002604195.1 succinylglutamate desuccinylase/aspartoacylase family protein AspA YP_002604198.1 dihydroorotate dehydrogenase, catalytic subunit PyrD (DHODase) YP_002604214.1 zinc-containing alcohol dehydrogenase Adh YP_002604216.1 chaperone heat-shock protein DnaK YP_002604217.1 chaperone heat-shock protein DnaK YP_002604221.1 UDP-glucose 6-dehydrogenase Ugd YP_002604222.1 capsular polysaccharide biosynthesis protein CapD1 YP_002604223.1 capsular polysaccharide biosynthesis protein CapD2 YP_002604224.1 Undecaprenyl-phosphate- (UDP-) alpha-N-acetylglucosaminyl 1-phosphate transferase WecA YP_002604225.1 NAD-dependent epimerase/dehydratase GalE YP_002604227.1 biofilm biosynthesis N-glycosyltransferase PgaC YP_002604232.1 glycogen synthase GlgA YP_002604234.1 alginate O-acetyltransferase AlgJ [precursor] YP_002604235.1 alginate O-acetylation protein AlgI (O-acetylase) YP_002604254.1 outer membrane cobalamin (Vitamin B12) translocator/receptor protein BtuB YP_002604256.1 sensor protein AtoS2 YP_002604258.1 general secretion pathway protein GspD YP_002604261.1 general secretion pathway protein GspL YP_002604262.1 general secretion pathway protein GspK YP_002604263.1 general secretion pathway protein GspK YP_002604264.1 general secretion pathway protein GspI YP_002604270.1 general secretion pathway protein GspH (Type II secretory pathway membrane protein) YP_002604271.1 general secretion pathway protein GspG (Type II secretory pathway) YP_002604272.1 general secretion pathway protein GspF (Type II secretory pathway) YP_002604273.1 general secretion pathway protein GspE (ATPase family protein) YP_002604274.1 spermine/spermidine synthase SpeE; catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_002604279.1 catalyzes the removal of amino acids from the N termini of peptides YP_002604280.1 Includes: D-alanyl-D-alanine carboxypeptidase, D-alanyl-D-alanine-endopeptidase) YP_002604283.1 DNA-directed RNA polymerase, omega chain (RNAP omega subunit) YP_002604284.1 transcription elongation factor GreA (transcript cleavage factor GreA) YP_002604285.1 phosphatidylserine decarboxylase proenzyme Psd; catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine YP_002604287.1 ATP-dependent protease Lon ( Peptidase S16) YP_002604288.1 type IV prepilin-like leader peptidase (prepilin peptidase / N-methyltransferase) YP_002604289.1 chemotaxis protein CheX YP_002604292.1 exodeoxyribonuclease I (Exonuclease I) (DNA deoxyribophosphodiesterase) (dRPase) YP_002604294.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002604298.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002604299.1 Holliday junction DNA helicase RuvA YP_002604300.1 Crossover junction endodeoxyribonuclease RuvC YP_002604302.1 peptidoglycan-associated lipoprotein (precursor) YP_002604303.1 periplasmic component of the TolB complex YP_002604305.1 biopolymer transport protein TolR YP_002604306.1 biopolymer transport protein TolQ (proton channel family protein) YP_002604307.1 60 kDa chaperonin (HSP60 family protein); 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002604308.1 10 kDa chaperonin (HSP10 family protein) YP_002604312.1 Lambda CII stability-governing protein HflC (SPFH domain protein) YP_002604313.1 Lambda CII stability-governing protein HflK YP_002604316.1 predicted histidinol-phosphatase HisK (HolPase) YP_002604317.1 RNA methyltransferase TrmH YP_002604318.1 Ferritin heavy chain Ftn (Ferritin H subunit) YP_002604319.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx7 YP_002604320.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx8 YP_002604321.1 (S)-2-hydroxy-acid dehydrogenase YP_002604326.1 5,10-methylene-tetrahydrofolate reductase MetF2 YP_002604330.1 shikimate dehydrogenase AroE YP_002604331.1 alkaline phosphatase synthesis sensor protein PhoR YP_002604332.1 flagellar basal-body rod protein FlgG YP_002604333.1 5,10-methylene-tetrahydrofolate reductase MetF3 YP_002604335.1 F420-non-reducing hydrogenase, iron-sulfur subunit MvhD7 (4Fe-4S) YP_002604336.1 predicted heterodisulfide reductase / glutamate synthase fusion protein HdrL3 (selenocysteine protein) YP_002604337.1 5,10-methylene-tetrahydrofolate reductase MetF4 YP_002604339.1 ParA family protein YP_002604342.1 ribonuclease HII YP_002604343.1 50S ribosomal protein L19 YP_002604345.1 tRNA (guanine-N1)-methyltransferase TrmD; methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002604346.1 16S rRNA processing protein RimM YP_002604348.1 30S ribosomal protein S16 YP_002604349.1 54 kDa signal recognition particle Ffh (GTPase) YP_002604354.1 nitrate uptake ABC-transporter, permease protein NtrB YP_002604355.1 nitrate uptake ABC-transporter, periplasmic binding protein NtrA YP_002604356.1 nitrate uptake ABC-transporter, ATP-binding protein NtrC YP_002604358.1 ubiquinone biosynthesis protein UbiB YP_002604360.1 acyl-CoA dehydrogenase Acd10 YP_002604363.1 lysyl-tRNA synthetase LysS (lysine--tRNA ligase) (LysRS) YP_002604365.1 sulfate adenylyltransferase Sat2 (ATP-sulfurylase SUL) YP_002604370.1 N-utilization substance protein NusB homolog YP_002604371.1 6,7-dimethyl-8-ribityllumazine synthase RibH (DMRL synthase) (lumazine synthase) (riboflavin synthase beta chain); RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_002604372.1 riboflavin biosynthesis protein RibAB [Includes: GTP cyclohydrolase II ; 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] YP_002604373.1 riboflavin synthase, alpha chain RibE YP_002604374.1 riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_002604377.1 serine hydroxymethyltransferase GlyA (serine methylase) (SHMT) YP_002604378.1 ribose-5-phosphate isomerase RpiB (phosphoriboisomerase B) YP_002604379.1 acyl carrier protein AcpP YP_002604380.1 50S ribosomal protein L32 (ribosomal protein I) (BL37) YP_002604381.1 glutamyl-tRNA synthetase GltX (glutamate--tRNA ligase) (GluRS) YP_002604383.1 hydrogenase isoenzymes nickel incorporation protein HypB YP_002604384.1 hydrogenase nickel incorporation protein HypA YP_002604385.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_002604386.1 queuine tRNA-ribosyltransferase Tgt (tRNA-guanine transglycosylase) (guanine insertion enzyme) YP_002604387.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA (queuosine biosynthesis protein QueA) YP_002604389.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit GatB (Asp/Glu-ADT subunit B) YP_002604397.1 DNA mismatch repair protein MutL YP_002604399.1 glutamyl-tRNA(Gln) amidotransferase, subunit GatA (Glu-ADT subunit A) YP_002604400.1 glutamyl-tRNA(Gln) amidotransferase, subunit GatC (Glu-ADT subunit C) YP_002604402.1 arginyl-tRNA synthetase ArgS (arginine--tRNA ligase) (ArgRS); catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002604405.1 glucose-6-phosphate isomerase Pgi (GPI) (phosphoglucose isomerase) (PGI) (phosphohexose isomerase) (PHI) YP_002604407.1 catalyzes the removal of amino acids from the N termini of peptides YP_002604409.1 hdr-like menaquinol-oxidizing complex, subunit HmeC YP_002604410.1 hdr-like menaquinol-oxidizing complex, subunit HmeD YP_002604411.1 hdr-like menaquinol-oxidizing complex, subunit HmeE1 (cytochrome c family protein) YP_002604412.1 hdr-like menaquinol-oxidizing complex, subunit HmeE2 (4Fe-4S family protein) YP_002604413.1 hdr-like menaquinol-oxidizing complex, subunit HmeB YP_002604415.1 50S ribosomal protein L21 YP_002604416.1 involved in the peptidyltransferase reaction during translation YP_002604418.1 glutamate 5-kinase ProB (gamma-glutamyl kinase) (GK) YP_002604419.1 gamma-glutamyl phosphate reductase ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) YP_002604422.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmA; catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002604425.1 pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB) YP_002604427.1 propionyl-CoA carboxylase PccB (carboxyltransferase) YP_002604428.1 dephospho-CoA kinase CoaE (dephosphocoenzyme A kinase) YP_002604430.1 translation elongation factor FusA (GTPase) YP_002604434.1 fusion protein IspH [4-hydroxy-3-methylbut-2-enyl diphosphate reductase (N-terminal) / UbiA-related prenyltransferase (C-terminal)] YP_002604441.1 pyrazinamidase/nicotinamidase PncA (PZAase) (nicotine deamidase) (NAMase) YP_002604449.1 SigE homolog YP_002604451.1 electron transport complex protein RnfC2 YP_002604452.1 electron transport complex protein RnfD2 YP_002604453.1 electron transport complex protein RnfG2 YP_002604454.1 electron transport complex protein RnfE2; in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase YP_002604455.1 electron transport complex protein RnfA2 YP_002604458.1 thiamine biosynthesis lipoprotein ApbE precursor YP_002604460.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA / glucose inhibited division protein GidA; GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002604461.1 chaperone protein DnaJ YP_002604462.1 hypoxanthine-guanine phosphoribosyltransferase Hpt (HGPRT) (HGPRTase) YP_002604470.1 ribonuclease H (RNase H) YP_002604477.1 DNA ligase LigA (Polydeoxyribonucleotide synthase); catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_002604479.1 glutamate synthase [NADPH], large chain (NADPH-GOGAT) YP_002604480.1 glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT) YP_002604482.1 glucokinase (glucose kinase) YP_002604483.1 class I fumarate hydratase FumA (fumarase) YP_002604484.1 succinate dehydrogenase/fumarate reductase, iron-sulfur containing subunit SdhB; part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB YP_002604485.1 succinate dehydrogenase/fumarate reductase, flavoprotein containing subunit SdhA; part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB YP_002604486.1 succinate dehydrogenase/fumarate reductase, cytochrome b containing subunit SdhC YP_002604487.1 succinyl-CoA synthetase, alpha subunit SucD2 (SCS-alpha) YP_002604488.1 succinyl-CoA synthetase, beta chain (SCS-beta); catalyzes the interconversion of succinyl-CoA and succinate YP_002604489.1 LAO/AO transport system kinase YP_002604490.1 homodimeric methylmalonyl-CoA mutase Sbm (MCM-alpha); MDM; functions in conversion of succinate to propionate YP_002604497.1 sulfate/thiosulfate import ATP-binding protein CysA (sulfate-transporting ATPase) YP_002604498.1 sulfate transport system, permease protein CysT YP_002604500.1 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC (1-AGP acyltransferase) YP_002604515.1 NADH oxidase (NOXase) YP_002604516.1 suppressor protein FxsA (affecting phage T7 exclusion by the F plasmid) YP_002604521.1 long-chain-fatty-acid-CoA ligase AcsL3 (AMP-binding protein) YP_002604523.1 cold shock protein CspB YP_002604526.1 selenocysteine-containing peroxiredoxin PrxU (selenocysteine protein) YP_002604536.1 selenocysteine-specific translation elongation factor SelB YP_002604538.1 oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase) YP_002604542.1 predicted DNA translocase FtsK YP_002604544.1 bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase ] YP_002604545.1 bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase] YP_002604551.1 DnaK suppressor protein DksA YP_002604554.1 FO synthase FbiC (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase) YP_002604555.1 FO synthase FbiC (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase) YP_002604560.1 Xaa-Pro dipeptidase PepQ (X-Pro dipeptidase) YP_002604564.1 polyketide synthase Pks YP_002604566.1 amino-acid acetyltransferase ArgA (N-acetylglutamate synthase) (AGS) (NAGS) YP_002604582.1 tryptophan synthase, alpha chain TrpA; catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_002604583.1 tryptophan synthase, beta chain TrpB; catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002604585.1 universal stress protein Usp YP_002604587.1 thiol:disulfide interchange protein DsbC YP_002604588.1 high affinity H(+)/ sulfate cotransporter SulP2 (hydrogen/sulfate permease) YP_002604590.1 indolepyruvate:ferredoxin oxidoreductase, alpha subunit IorA3 YP_002604591.1 indolepyruvate:ferredoxin oxidoreductase, beta subunit IorB3 YP_002604600.1 type II secretory pathway, component ExeA (ATPase) YP_002604614.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor6 YP_002604626.1 transcription elongation factor GreA (transcript cleavage factor GreA) YP_002604641.1 NADPH dehydrogenase NamA (Xenobiotic reductase) YP_002604642.1 endonuclease IV (Endodeoxyribonuclease IV) YP_002604643.1 outer membrane multidrug resistance protein MdtQ [precursor] YP_002604644.1 multidrug resistance protein MdtC (cation/multidrug efflux pump MdtC) YP_002604645.1 multidrug resistance protein MdtA (multidrug transporter MdtA) [precursor] YP_002604663.1 methyl-accepting chemotaxis protein McpB YP_002604670.1 dimethylamine corrinoid protein MtbC YP_002604674.1 DNA primase DnaG5 (Zinc finger, CHC2-type protein) YP_002604677.1 chemotaxis protein CheW YP_002604678.1 methyl-accepting chemotaxis transducer protein CheT (Dipeptide chemoreceptor protein) YP_002604679.1 chemotaxis histidine kinase protein CheA YP_002604681.1 chemotaxis protein CheD YP_002604685.1 chemotaxis response regulator glutamate methylesterase CheB YP_002604686.1 chemotaxis protein methyltransferase CheR YP_002604687.1 chemotaxis protein CheD YP_002604692.1 site-specific DNA-invertase/resolvase RlgA2 (Site-specific recombinase RlgA) YP_002604696.1 nitrate/nitrite transport protein NarK YP_002604697.1 glutamine-hydrolyzing GMP synthase GuaA (glutamine amidotransferase) (GMP synthetase) YP_002604700.1 ABC-type ribose transport system, permease protein RbsC YP_002604701.1 ABC-type ribose transport system, periplasmic D-ribose-binding protein RsbB [precursor] YP_002604702.1 ABC-type ribose transport system, ATP-binding protein RbsA (ATPase) YP_002604715.1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE (Cobalamin-independent methionine synthase) YP_002604722.1 selenide, water dikinase SelD (selenium donor protein) (selenophosphate synthetase) (selenium donor protein) YP_002604724.1 cysteine desulfurase IscS (aminotransferase, class V; NifS homolog protein) YP_002604733.1 proline racemase PrdF YP_002604739.1 3-methyladenine DNA glycosylase AlkA (3-methyladenine-DNA glycosidase) YP_002604742.1 tyrosyl-tRNA synthetase TyrS (Tyrosine--tRNA ligase) (TyrRS) YP_002604746.1 ATP synthase F1, epsilon subunit AtpC2 YP_002604747.1 ATP synthase F1, beta subunit AtpD2; Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002604748.1 ATP synthase F1, gamma subunit AtpG2; produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit YP_002604749.1 ATP synthase F1, alpha subunit AtpA2; produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002604750.1 ATP synthase F1, delta subunit AtpH; produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_002604751.1 ATP synthase F0, B subunit YP_002604752.1 ATP synthase F0, B' subunit YP_002604754.1 penicillin-binding protein MrdA (PBP) (transpeptidase) YP_002604756.1 rod shape-determining protein MreC YP_002604757.1 functions in MreBCD complex in some organisms YP_002604760.1 Na(+)/H(+) antiporter, subunit MnhD1 (Mrp complex, subunit D1) YP_002604762.1 Na(+)/H(+) antiporter, subunit MnhA1 (Mrp complex, subunit A1); subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport YP_002604764.1 Na(+)/H(+) antiporter, subunit MnhA2 (Mrp complex, subunit A2) YP_002604765.1 Na(+)/H(+) antiporter, subunit MnhD (Mrp complex, subunit D) YP_002604766.1 Na(+)/H(+) antiporter, subunit MnhC (Mrp complex, subunit C) YP_002604767.1 Na(+)/H(+) antiporter, subunit MnhB (Mrp complex, subunit B) YP_002604768.1 Na(+)/H(+) antiporter, subunit MnhF (Mrp complex, subunit F) YP_002604769.1 Na(+)/H(+) antiporter, subunit MnhF (Mrp complex, subunit F) YP_002604770.1 Na(+)/H(+) antiporter, subunit MnhE (Mrp complex, subunit E) YP_002604773.1 cold-shock DEAD box protein DeaD (ATP-dependent RNA helicase DeaD homolog) YP_002604775.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_002604776.1 permease RhaT (drug/metabolite transporter (DMT) superfamily protein) YP_002604777.1 peptide chain release factor 3 PrfC (RF-3) YP_002604778.1 phosphoserine aminotransferase SerC (PSAT); catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_002604779.1 D-3-phosphoglycerate dehydrogenase SerA (PGDH); catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002604781.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_002604787.1 Ras related GTP-binding domain protein MglA (motility gliding protein A) YP_002604788.1 gliding motility regulatory protein MglB YP_002604793.1 universal stress protein Usp YP_002604794.1 electron transfer flavoprotein, alpha-subunit EtfA2 (alpha-ETF) (ETFLS) YP_002604795.1 electron transfer flavoprotein, beta-subunit EftB2 (beta-ETF) (ETFSS) YP_002604796.1 heterodisulfide reductase, subunit HdrF3 (HdrCB homologue protein) YP_002604800.1 negative regulator of flagellin synthesis FlgM (anti-sigma-28 factor) YP_002604802.1 imidazole glycerol phosphate synthase, subunit HisF (IGP synthase, subunit HisF) (IGPS, subunit HisF); catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002604803.1 imidazole glycerol phosphate synthase, subunit HisH (IGP synthase, subunit HisH) (IGPS, subunit HisH); with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002604806.1 phosphate starvation inducible PhoH-like protein (ATPase) YP_002604809.1 pyridoxal phosphate biosynthetic protein PdxJ (PNP synthase); involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_002604810.1 tRNA pseudouridine synthase truC (tRNA-uridine isomerase C) (tRNA pseudouridylate synthase C) YP_002604816.1 aspartokinase LysC (aspartate kinase) YP_002604817.1 orotidine 5'-phosphate decarboxylase PyrF (OMP decarboxylase) (OMPDCase) (OMPdecase) YP_002604818.1 chemotaxis protein CheD YP_002604819.1 L-seryl-tRNA(Sec) selenium transferase SelA (cysteinyl-tRNA(Sec) selenium transferase) (selenocysteine synthase) YP_002604821.1 phosphoheptose isomerase GmhA (sedoheptulose 7-phosphate isomerase) YP_002604824.1 porphobilinogen deaminase HemC (PBG) (hydroxymethylbilane synthase) (HMBS) YP_002604825.1 porphyrin biosynthesis protein HemD [includes: uroporphyrin-III C-methyltransferase; uroporphyrinogen-III synthase] YP_002604826.1 molybdenum cofactor biosynthesis protein MoaA YP_002604828.1 50S ribosomal protein L17 YP_002604829.1 DNA-directed RNA polymerase, alpha chain RpoA (RNAP, alpha subunit) (transcriptase, alpha chain) (RNA polymerase, alpha subunit); catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002604832.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002604833.1 50S ribosomal protein L36 YP_002604834.1 translation initiation factor IF-1 YP_002604835.1 preprotein translocase, subunit SecY; forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_002604837.1 50S ribosomal protein L30 YP_002604842.1 30S ribosomal protein S14 YP_002604844.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002604845.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002604847.1 50S ribosomal protein L29 YP_002604848.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002604851.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002604852.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002604853.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002604854.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002604855.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002604856.1 30S ribosomal protein S10 YP_002604857.1 elongation factor Tu (EF-Tu); EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002604860.1 DNA-directed RNA polymerase, beta' chain RpoC (RNAP, beta' subunit) (transcriptase, beta' chain) (RNA polymerase, beta' subunit) YP_002604861.1 DNA-directed RNA polymerase, beta chain RpoB (RNAP, beta subunit) (transcriptase, beta chain) (RNA polymerase, beta subunit) YP_002604862.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002604863.1 50S ribosomal protein L10 YP_002604864.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002604866.1 transcription antitermination protein NusG YP_002604867.1 preprotein translocase, subunit SecE YP_002604868.1 50S ribosomal protein L33 YP_002604869.1 elongation factor Tu (EF-Tu); EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002604871.1 membrane-bound lytic murein transglycosylase MltD [Precursor] YP_002604873.1 chemotaxis protein CheA YP_002604874.1 chemotaxis protein CheW YP_002604875.1 chemotaxis response regulator protein CheB (glutamate methylesterase) YP_002604876.1 chemotaxis protein methyltransferase CheR YP_002604879.1 phosphoglycerate kinase Pgk YP_002604881.1 DNA repair protein RadC-homolog YP_002604882.1 DNA gyrase, subunit GyrA YP_002604884.1 acetyl-CoA acetyltransferase AtoB3 (acetoacetyl-CoA thiolase) YP_002604886.1 related to the helicase subunit of the Holliday junction resolvase YP_002604887.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002604888.1 Trk system, potassium uptake protein TrkH YP_002604889.1 Trk system, potassium uptake protein TrkA; involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain YP_002604890.1 chemotaxis protein MotA (motility protein A) YP_002604891.1 chemotaxis protein MotB (motility protein B) YP_002604894.1 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB YP_002604895.1 UDP-N-acetylglucosamine--N-acetylmuramyl- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG YP_002604896.1 sialic acid synthase NeuB (N-acetylneuraminate synthase) (N-acetylneuraminic acid synthase) YP_002604901.1 imidazole glycerol phosphate synthase, subunit HisH (IGP synthase glutamine amidotransferase subunit) (IGP synthase, subunit HisH) (ImGP synthase, subunit HisH) (IGPS, subunit HisH) YP_002604902.1 type II secretory pathway, component ExeA (ATPase) YP_002604906.1 imidazole glycerol phosphate synthase, subunit HisF (IGP synthase cyclase subunit) (IGP synthase, subunit HisF) (ImGP synthase, subunit HisF) (IGPS, subunit HisF); catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002604907.1 N-acylneuraminate cytidylyltransferase (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc synthetase) (CMP-sialic acid synthetase) YP_002604911.1 flagellar hook-associated protein FliD (HAP2) YP_002604912.1 flagellar protein FliS YP_002604914.1 flagellar protein FlaG YP_002604916.1 carbon storage regulator protein homolog CsrA YP_002604920.1 peptidoglycan hydrolase FlgJ (muramidase FlgJ) YP_002604921.1 flagellar P-ring protein FlgI [precursor] (basal body P-ring protein) YP_002604922.1 flagellar L-ring proteinFlgH [precursor] (basal body L-ring protein) YP_002604923.1 flagella basal body P-ring formation protein FlgA [precursor] YP_002604924.1 flagellar basal-body rod protein FlgG (distal rod protein); makes up the distal portion of the flagellar basal body rod YP_002604925.1 flagellar basal-body rod protein FlgF YP_002604926.1 flagellar biosynthetic protein FlhB YP_002604927.1 flagellar hook-length control protein FliK YP_002604931.1 RNA polymerase sigma factor for flagellar operon FliA (sigma-F factor) (sigma-28) YP_002604932.1 flagellar biosynthesis protein FlhG YP_002604933.1 flagella associated GTP-binding protein FlhF YP_002604934.1 flagellar biosynthesis protein FlhA YP_002604935.1 flagellar biosynthetic protein FlhB YP_002604936.1 flagellar biosynthetic protein FliR YP_002604937.1 flagellar biosynthetic protein FliQ YP_002604938.1 flagellar biosynthetic protein FliP YP_002604939.1 flagellar biosynthesis protein FliO YP_002604940.1 flagellar motor switch protein FliN (type III secretion pathway protein) YP_002604941.1 flagellar motor switch protein FliM YP_002604942.1 flagellar basal body-associated protein FliL YP_002604943.1 flagellar hook protein FlgE YP_002604944.1 basal-body rod modification protein FlgD YP_002604945.1 flagellar hook-length control protein FliK YP_002604947.1 flagellar basal-body protein FliJ YP_002604948.1 flagellum-specific ATP synthase FliI YP_002604949.1 flagellar regrowth and assembly protein FliH YP_002604950.1 flagellar motor switch protein FliG YP_002604951.1 flagellar M-ring protein FliF YP_002604952.1 flagellar hook-basal body complex protein FliE YP_002604953.1 flagellar basal-body rod protein FlgC YP_002604954.1 flagellar basal-body rod protein FlgB YP_002604958.1 chemotaxis protein CheY YP_002604959.1 inhibitor CheX (inhibitor of MCP methylation protein CheC) YP_002604963.1 diaminopimelate decarboxylase LysA (DAP decarboxylase) YP_002604964.1 glutamine-dependent NAD(+) synthetase NadE (NAD(+) synthase [glutamine-hydrolyzing]) YP_002604968.1 permease of the major facilitator superfamily AmpG YP_002604971.1 HAM homolog protein; hydrolyzes non-standard nucleotides such as xanthine and inosine YP_002604974.1 outer membrane protein OmpF YP_002604977.1 pyruvate:ferredoxin oxidoreductase, subunit PorA1' YP_002604978.1 pyruvate:ferredoxin oxidoreductase, subunit PorB1 YP_002604979.1 pyruvate:ferredoxin oxidoreductase, subunit PorC1 YP_002604980.1 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx9 YP_002604984.1 ATP-dependent helicase HrpA YP_002604986.1 heterodisulfide reductase, subunit HdrD4 (selenocysteine-containing protein, HdrCB homologue) YP_002604988.1 threonyl-tRNA synthetase ThrS (Threonine--tRNA ligase) (ThrRS); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002604989.1 ribonuclease RnD (RNase D) YP_002604990.1 diaminopimelate epimerase DapF DAP epimerase) YP_002604992.1 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase HpcE YP_002604996.1 methyl-accepting chemotaxis transducer TlpB YP_002604997.1 rRNA methyltransferase protein SpoU YP_002605001.1 GTP-binding eleongation factor TypA (Tyrosine phosphorylated protein A) YP_002605004.1 nucleotide-binding universal stress protein Usp YP_002605005.1 succinyl-CoA synthetase, beta subunit SucC3 (GNAT domain family protein) YP_002605008.1 ADP-ribosylglycohydrolase DraG YP_002605013.1 histidinol-phosphate aminotransferase HisC (Imidazole acetol-phosphate transaminase) YP_002605014.1 MATE efflux family protein MatE YP_002605017.1 anti-sigma regulatory factor Srf (sigma-B negative effector/serine-protein kinase) YP_002605022.1 aerobic-type carbon monoxide dehydrogenase, small chain CoxS YP_002605023.1 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL YP_002605026.1 lysine/threonine exporter protein LysE YP_002605027.1 ATP-dependent phosphofructokinase PfkA2 YP_002605028.1 acyl-CoA transferases/carnitine dehydratase CaiB YP_002605030.1 ABC-type glycine betaine transporter, periplasmic substrate binding protein ProX YP_002605031.1 ABC-type glycine betaine transporter, permease protein ProW YP_002605032.1 ABC-type glycine betaine transporter, ATP-binding protein ProV YP_002605033.1 Mn2+ and Fe2+ transporter MntH of the NRAMP family YP_002605034.1 hydroxyethylthiazole kinase ThiM (4-methyl-5-beta- hydroxyethylthiazole kinase) YP_002605039.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA7 (PEP synthase) YP_002605045.1 high affinity sodium/sulphate-dependent symporter NadC1 YP_002605049.1 high affinity sodium/sulphate-dependent symporter NadC2 YP_002605052.1 high affinity sodium/sulphate-dependent symporter NadC3 YP_002605053.1 universal stress protein UspA YP_002605054.1 acetyl-CoA synthetase/acetate-CoA ligase AcsA3 (AMP-binding protein) YP_002605056.1 universal stress protein UspA YP_002605057.1 TRAP-type C4-dicarboxylate permease, large subunit DctM6 YP_002605058.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ6 YP_002605059.1 TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP6 YP_002605063.1 NAD-specific glutamate dehydrogenase GdhA YP_002605064.1 diadenosine tetraphosphate (Ap4A) hydrolase Hit YP_002605065.1 magnesium and cobalt transport protein CorA YP_002605067.1 electron transfer flavoprotein, beta-subunit EftB3 (beta-ETF) (ETFSS) YP_002605068.1 electron transfer flavoprotein, alpha-subunit EtfA3 (alpha-ETF) (ETFLS) YP_002605069.1 electron transfer flavoprotein-ubiquinone oxidoreductase EtfO (ETF-QO) YP_002605072.1 citrate (si)-synthase GltA2 YP_002605073.1 glutaconyl-CoA decarboxylase GcdA YP_002605075.1 oxaloacetate decarboxylase, beta subunit OadB YP_002605076.1 4-carboxymuconolactone decarboxylase PcaC YP_002605077.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd11 (butyryl-CoA dehydrogenase) YP_002605078.1 pyruvate:ferredoxin oxidoreductase, subunit PorB2 YP_002605079.1 pyruvate:ferredoxin oxidoreductase, subunit PorC2 YP_002605084.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor7 YP_002605086.1 glutaconyl-CoA decarboxylase GcdA YP_002605088.1 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit OadB YP_002605089.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd12 (butyryl-CoA dehydrogenase) YP_002605090.1 glutaconate CoA transferase, subunit GctB YP_002605091.1 glutaconate CoA-transferase, subunit GctA YP_002605092.1 tungsten-containing aldehyde ferredoxin:oxidoreductase Aor8 YP_002605093.1 NAD-specific glutamate dehydrogenase GdhA YP_002605094.1 TRAP-type C4-dicarboxylate permease, large subunit DctM7 YP_002605095.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ7 YP_002605096.1 TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP7 YP_002605098.1 4-aminobutyrate aminotransferase GabT YP_002605099.1 aldehyde oxidoreductase Mop YP_002605104.1 adenine phosphoribosyltransferase Apt YP_002605105.1 TRAP-type C4-dicarboxylate transporter, periplasmic component DctP8 YP_002605106.1 TRAP-type C4-dicarboxylate permease, large subunit DctM5 YP_002605107.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ8 YP_002605111.1 aminotransferase AspC (transaminase A) (ASPAT) YP_002605114.1 3-hydroxybutyryl-CoA dehydratase Crt YP_002605119.1 polytopic membrane protein HyfB (transmembrane subunit of Hyf-complex) YP_002605120.1 polytopic membrane protein HyfC (transmembrane subunit of hyf-complex) YP_002605121.1 polytopic membrane protein HyfE (transmembrane subunit of hyf-complex) YP_002605122.1 hydrogenase HyfF homolog (hydrogenase 4 family protein) YP_002605123.1 hydrogenase HyfG homolog, large subunit YP_002605124.1 hydrogenase HyfI homolog, small subunit YP_002605126.1 ATP-dependent RNA helicase DbpA YP_002605127.1 HTH-type transcriptional regulator RscR (LysR-family protein) YP_002605131.1 alkyl hydroperoxide reductase/peroxiredoxin AhcP YP_002605133.1 rhodanese homology domain (RHOD) protein ThiF YP_002605145.1 cytidine monophosphate kinase Cmk YP_002605147.1 rare lipoprotein RlpA YP_002605148.1 Ca2+/Na+ antiporter CcaA YP_002605153.1 tRNA pseudouridine synthase TruA (Uracil hydrolyase) YP_002605158.1 outer membrane protein transporter FadL (OMPP1/FadL/TodX family protein) YP_002605173.1 transposase IstA (IS21 family protein) YP_002605188.1 aromatic ring-opening dioxygenase, catalytic subunit LigB YP_002605189.1 ATP-dependent helicase RecQ YP_002605199.1 type I site-specific restriction-modification system, restriction subunit HsdR (helicase family protein) YP_002605207.1 methyl-accepting chemotaxis transducer Mcp YP_002605209.1 monofunctional, single-strand selective uracil-DNA glycosylase SmuG YP_002605212.1 3-oxoacyl (acyl-carrier protein) reductase FabG8 YP_002605213.1 acetyl-CoA acetyltransferase AtoB4 (Acetoacetyl-CoA thiolase) YP_002605214.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd13 (butyryl-CoA dehydrogenase) YP_002605215.1 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase CaiC YP_002605219.1 DNA primase DnaG11 (Zinc finger, CHC2-type protein) YP_002605221.1 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase CaiC YP_002605226.1 competence-damage protein CinA YP_002605227.1 sensor protein AtoS3 (PAS domain protein) YP_002605229.1 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase CaiC YP_002605231.1 cation/multidrug efflux pump, integral membrane protein AcrD (AcrB/AcrD/AcrF family protein) YP_002605232.1 cation/multidrug efflux pump, periplasmic resistance protein AcrE (Acriflavine resistance protein E precursor) YP_002605233.1 cation/multidrug efflux pump, outer membrane efflux protein MdtP YP_002605237.1 universal stress protein UspA YP_002605238.1 cation/multidrug efflux pump, outer membrane efflux protein MdtP YP_002605239.1 cation/multidrug efflux pump, integral membrane protein AcrB (Acriflavin resistance family protein) YP_002605240.1 cation/multidrug efflux pump, periplasmic resistance protein AcrA (Acriflavine resistance protein A precursor) YP_002605243.1 universal stress protein UspA YP_002605244.1 universal stress protein UspA YP_002605245.1 acetoin utilization protein AcuB YP_002605258.1 high affinity H(+)/ sulfate cotransporter SulP3 (hydrogen/sulfate permease) YP_002605262.1 ribosomal pseudouridine synthase, large subunit rulC (Pseudouridylate synthase) (Uracil hydrolyase) YP_002605267.1 cytosol aminopeptidase PepA (LAP) (Leucyl aminopeptidase) YP_002605272.1 RNA polymerase associated protein RapA (ATP-dependent helicase HepA) YP_002605274.1 alanyl-tRNA synthetase AlaS (Alanine--tRNA ligase) (AlaRS) YP_002605278.1 ATP-dependent DNA helicase PcrA YP_002605279.1 phosphomannomutase/phosphoglucomutase AlgC YP_002605280.1 undecaprenyl-diphosphatase UppP (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein) YP_002605281.1 hydroxylamine reductase Hcp (Hybrid-cluster protein) (6Fe-6S prismane cluster-containing protein HCP); catalyzes the reduction of hydroxylamine to ammonia and water YP_002605285.1 hydroxypyruvate reductase TtuD YP_002605286.1 sugar fermentation stimulation protein SfsA YP_002605288.1 F420-dependent pyrroline-5-carboxylate reductase ProC (NADP oxidoreductase coenzyme) YP_002605293.1 cytochrome bd-type ubiquinol oxidase, subunit I (CydA) YP_002605294.1 cytochrome bd-type ubiquinol oxidase, subunit II (CydB) YP_002605296.1 high molecular weight rubredoxin (Rubredoxin-type Fe(Cys)4 protein YP_002605299.1 indolepyruvate:ferredoxin oxidoreductase, beta subunit IorB4 YP_002605300.1 indolepyruvate:ferredoxin oxidoreductase, alpha subunit IorA4 YP_002605310.1 DNA polymerase V/DNA repair protein UmuD YP_002605311.1 DNA repair protein UmuC YP_002605315.1 menaquinone biosynthesis (SAM-dependent) methyltransferase UbiE YP_002605317.1 thiol-disulfide oxidoreductase ResA YP_002605318.1 periplasmic formate dehydrogenase, beta subunit FdhB7 (4Fe-4S family protein) YP_002605319.1 periplasmic formate dehydrogenase, alpha subunit FdhA7 (selenocysteine protein) YP_002605320.1 exodeoxyribonuclease III (ExoA) YP_002605322.1 carbon-monoxide dehydrogenase Cdh1 (CODH1) YP_002605324.1 NADP-dependent isocitrate dehydrogenase Icd YP_002605325.1 high molecular weight rubredoxin (Rubredoxin-type Fe(Cys)4 protein YP_002605326.1 citrate (si)-synthase GltA3 YP_002605327.1 ferredoxin-thioredoxin reductase, catalytic subunit FtrB (beta chain) YP_002605330.1 pyruvate:ferredoxin oxidoreductase, subunit PorA2 YP_002605331.1 pyruvate:ferredoxin oxidoreductase, subunit PorB3 YP_002605334.1 cysteine desulfurase IscS (aminotransferase, class V; NifS homolog protein) YP_002605337.1 phosphoenolpyruvate carboxykinase PckG (PEP carboxykinase); catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_002605339.1 phosphoserine phosphatase RsbU YP_002605342.1 anti-sigma regulatory factor RsbW (Ser/Thr protein kinase) YP_002605343.1 anti-anti-sigma regulatory factor RsbV (antagonist of anti-sigma factor) YP_002605347.1 high-affinity ABC-type branched-chain amino acid transport systems, ATPase component LivF YP_002605348.1 Coenzyme F390 synthetase/phenylacetate-coenzyme A ligase PaaK YP_002605357.1 HTH-type glycerol-3-phosphate regulon repressor GlpR (DeoR family protein) YP_002605359.1 phosphate starvation-inducible ATPase PhoH YP_002605379.1 transport/processing ATP-binding protein ComA YP_002605383.1 3-oxoacyl-acyl carrier synthase III FabH3 YP_002605384.1 enoyl-CoA hydratase/carnithine racemase CaiD YP_002605390.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmB (Phosphoglyceromutase) YP_002605393.1 cytochrome b deoxydase CydA (selenocysteine protein) YP_002605402.1 long-chain-fatty-acid-CoA ligase AcsL4 (AMP-binding protein) YP_002605414.1 arsenate reductase ArsC (arsenical pump modifier); GO:4725;6470 YP_002605417.1 NAD-specific glutamate dehydrogenase GdhA YP_002605418.1 high molecular weight rubredoxin (Rubredoxin-type Fe(Cys)4 protein YP_002605420.1 non-heme iron protein Dfx (desulfoferrodoxin) (Superoxide dismutase) YP_002605421.1 rubrerythrin family protein YP_002605429.1 poly(R)-hydroxyalkanoic acid synthase, subunit PhaE YP_002605430.1 poly(R)-hydroxyalkanoic acid synthase, subunit PhaC YP_002605432.1 monoamine oxidase-like dehydratase MaoC YP_002605435.1 enoyl-CoA hydratase / isomerase protein CaiD YP_002605437.1 phage shock protein PspC YP_002605439.1 phage shock protein PspA2 YP_002605440.1 psp operon transcriptional activator PspF YP_002605441.1 Thiol-disulfide interchange protein DsbD [precursor] YP_002605444.1 peptidyl-prolyl cis-trans isomerase PpiB YP_002605446.1 phosphoserine phosphatase SerB (PSP) YP_002605448.1 ornithine aminotransferase RocD YP_002605449.1 HTH-type glycerol-3-phosphate regulon repressor GlpR (DeoR family protein) YP_002605451.1 anaerobic sn-glycerol-3-phosphate dehydrogenase, large subunit GlpA3 YP_002605452.1 anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpB3; sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters YP_002605453.1 ATP-dependent RNA helicase RecQ YP_002605454.1 Sec-independent protein translocase protein TatB; TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002605455.1 Sec-independent protein translocase protein TatC YP_002605457.1 cobyrinic acid a,a-diamide synthase CbiA2 YP_002605458.1 dissimilatory sulfite reductase complex, associated protein DsrD YP_002605459.1 dissimilatory sulfite reductase complex, beta subunit DsrB2 (Hydrogensulfite reductase beta subunit) YP_002605460.1 dissimilatory sulfite reductase complex, alpha subunit DsrA2 (Hydrogensulfite reductase alpha subunit) YP_002605462.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase DapA YP_002605464.1 two domain fusion protein MinD (iron-sulfur binding 4Fe-4S ferredoxin; Cobyrinic acid a,c-diamide synthase) YP_002605472.1 FAD/NAD-dependent pyridine nucleotide-disulphide oxidoreductase Nox YP_002605474.1 UTP-glucose-1-phosphate uridylyltransferase GtaB YP_002605477.1 ATP-dependent DNA helicase PcrA YP_002605479.1 alkyl hydroperoxide reductase, subunit AhpF YP_002605483.1 camphor resistance family protein CrcB YP_002605484.1 cytidine monophosphate kinase Cmk YP_002605487.1 out membrane assemby protein AsmA YP_002605492.1 ferrous iron (Fe2+) transport protein FeoB YP_002605493.1 ferrous iron (Fe2+) transport protein FeoA YP_002605494.1 iron-dependent transcription repressor protein TroR YP_002605497.1 glutamate synthase, beta chain GltD YP_002605498.1 pyruvate:ferredoxin oxidoreductase, subunit PorA3 YP_002605499.1 pyruvate:ferredoxin oxidoreductase, subunit PorB4; catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_002605500.1 glycerophosphoryl diester phosphodiesterase, periplasmic component GlpQ [precursor] YP_002605502.1 carbonic anhydrase EcaB (Carbonate dehydratase) YP_002605504.1 TRAP-type C4-dicarboxylate transporter, periplasmic component DctP9 YP_002605505.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ9 YP_002605506.1 TRAP-type C4-dicarboxylate permease, large subunit DctM9 YP_002605507.1 Aspartate aminotransferase AspC YP_002605514.1 general secretion pathway protein GspA YP_002605519.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA8 (PEP synthase) YP_002605522.1 activator of 2-hydroxyglutaryl-CoA dehydratase HgdC YP_002605523.1 2-hydroxyglutaryl-CoA dehydratase, subunit alpha HgdA YP_002605524.1 2-hydroxyglutaryl-CoA dehydratase, beta subunit HbdB YP_002605528.1 short-chain fatty acid transporter AtoE YP_002605531.1 multiple antibiotic resistance regulator MarR YP_002605532.1 4-phosphopantetheinyl transferase family protein Ffp YP_002605534.1 flagellar motor protein MotB YP_002605536.1 formimidoyltransferase-cyclodeaminase FtcD YP_002605537.1 Imidazolonepropionase HutI; catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_002605540.1 copper-transporting P-type ATPase CopA YP_002605562.1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase Nox (NOXase) YP_002605564.1 carbon-monoxide dehydrogenase Cdh2 (CODH2) YP_002605566.1 Activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC YP_002605569.1 3-isopropylmalate dehydratase, small subunit leuD2 (alpha-IPM isomerase/aconitase family protein) YP_002605570.1 3-isopropylmalate dehydratase, large subunit leuC2 (alpha-IPM isomerase/aconitase family protein) YP_002605571.1 chorismate synthase AroC; catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002605572.1 Anti-sigma regulatory factor YP_002605574.1 Glycogen phosphorylase 1 GlpV YP_002605585.1 Glutamate/aspartate periplasmic-binding protein [Precursor] GltI YP_002605586.1 Glutamate/aspartate transport system permease protein GltJ YP_002605587.1 Glutamate/aspartate transport system permease protein GltK YP_002605588.1 Glutamate/aspartate transport ATP-binding protein GltL YP_002605595.1 cation-transporting ATPase PacL YP_002605597.1 cation-transporting ATPase Pma1 YP_002605621.1 transcriptional modulator of MazE/toxin MazF YP_002605626.1 formimidoyltransferase-cyclodeaminase FtcD YP_002605627.1 urocanate hydratase HutU2 (Urocanase) (Imidazolonepropionate hydrolase); catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_002605629.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002605630.1 histidine utilization repressor HutC YP_002605632.1 histidine ammonia-lyase HutH YP_002605633.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002605639.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002605641.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002605644.1 phosphoglycolate phosphatase Gph YP_002605655.1 transposase for insertion sequences IS1326/IS1353 (IS21/IS408/IS1162 family protein) YP_002605656.1 transpositon helper protein IstB YP_002605659.1 transposase for insertion sequences IS1326/IS1353 (IS21/IS408/IS1162 family protein) YP_002605665.1 site-specific tyrosine recombinase XerD4 (DNA breaking-rejoining enzyme) YP_002605666.1 HTH-type transcriptional regulator (heavy metal / copper efflux protein) YP_002605676.1 predicted menaquinone biosynthesis methyltransferase ubiE YP_002605687.1 type II secretory pathway, component ExeA (ATPase) YP_002605705.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge YP_002605713.1 3-hydroxyisobutyrate dehydrogenase YwkC YP_002605716.1 phosphoenolpyruvate (PEP)-dependent phosphotransferase Pdp (PTS system protein) YP_002605718.1 acidic type II cytochrome TmcA2 (TpII-c3) YP_002605719.1 cytoplasmic Fe-S oxidoreductase (4Fe-4S ferredoxin) YP_002605720.1 membrane-bound heme containing protein TmcC2 YP_002605740.1 Signal transduction histidine kinase BarA YP_002605746.1 3-oxoacyl (acyl-carrier protein) reductase FabG9 YP_002605747.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd14 (butyryl-CoA dehydrogenase) YP_002605749.1 acetyl-CoA acetyltransferase AtoB5 (Acetoacetyl-CoA thiolase) YP_002605750.1 Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK YP_002605751.1 Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK YP_002605762.1 ABC-type spermidine/putrescine transport system permease component PotC YP_002605763.1 ABC-type spermidine/putrescine transport system permease component PotB YP_002605764.1 ABC-type spermidine/putrescine transport system, ATPase component PotA YP_002605765.1 ABC-type spermidine/putrescine transport system subtrate binding protein PotD YP_002605766.1 Periplasmic dipeptide transport protein DppA YP_002605767.1 ABC-type dipeptide transport system permease component DppB YP_002605768.1 ABC-type dipeptide transport system permease component DppC YP_002605769.1 ABC-type dipeptide transport system, ATP-binding component DppD YP_002605770.1 ABC-type dipeptide transport system, ATPase component DppF YP_002605776.1 Histidinol dehydrogenase HisD YP_002605778.1 TRAP-type C4-dicarboxylate permease, large subunit DctM10 YP_002605779.1 TRAP-type C4-dicarboxylate permease, small subunit DctQ10 YP_002605780.1 TRAP-type C4-dicarboxylate transporter, periplasmic component DctP10 YP_002605781.1 high affinity ammonium transporter Amt (AtAMT1;1) YP_002605782.1 nitrogen regulatory protein GlnB4 (P-II; transcriptional regulator of glnA) YP_002605785.1 cobalamin biosynthesis protein CbiB YP_002605787.1 cobalamin-5-phosphate synthase CobS YP_002605794.1 type I glutamate-ammonia ligase GlnA2 (glutamine synthetase) YP_002605796.1 Outer membrane protein MIP precursor mip YP_002605799.1 anaerobic cobalamin biosynthesis Co2+ chelatase CbiK3 YP_002605815.1 predicted 4-hydroxybenzoate polyprenyltransferase UbiA YP_002605818.1 Glycine betaine transporter opuD YP_002605819.1 trimethylamine methyltransferase MttB (TMA methyltransferase) YP_002605821.1 nitrogen assimilation regulatory protein NtrC YP_002605824.1 vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase) YP_002605825.1 phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA9 (PEP synthase) YP_002605829.1 Alanine dehydrogenase 2 Ald2 YP_002605832.1 predicted phosphohistidine phosphatase SixA YP_002605844.1 Cytosine deaminase CodA; Catalyzes the deamination of cytosine to uracil and ammonia YP_002605852.1 bacterial regulatory protein LuxR YP_002605854.1 DNA primase DnaG6 (Zinc finger, CHC2-type protein) YP_002605861.1 General L-amino acid transport ATP-binding protein AapP YP_002605865.1 N-acetylglucosaminyltransferase (Nodulation protein C) NodC YP_002605867.1 transmembrane sensor domain YP_002605868.1 predicted outer membrane protein OmpA YP_002605872.1 homoserine O-acetyltransferase MetX; Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine YP_002605876.1 predicted regulator of sigma E activity RseC YP_002605879.1 putative universal stress protein UspA YP_002605887.1 A/G-specific adenine glycosylase MutY YP_002605888.1 Ribonucleoside-diphosphate reductase alpha chain NrdA; Catalyzes the rate-limiting step in dNTP synthesis YP_002605893.1 branched-chain amino acid transport ATP-binding protein BraF YP_002605915.1 heterodisulfide reductase, subunit HdrD5 (HdrCB homologue protein) YP_002605926.1 formate dehydrogenase, formation protein FdhE-2 YP_002605927.1 periplasmic formate dehydrogenase, alpha subunit FdhA8 (selenocysteine protein) YP_002605928.1 periplasmic formate dehydrogenase, beta subunit FdhB8 (4Fe-4S family protein) YP_002605933.1 succinyl-CoA synthetase, alpha subunit SucD4 (SCS-alpha) YP_002605934.1 middle-chain-fatty-acid-acyl-CoA synthetase AcsM4 (AMP-binding protein); Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_002605935.1 type IV pilus assembly protein TapB YP_002605939.1 ABC-type cobalt importer, permease protein CbiQ3 YP_002605940.1 ABC-type cobalt importer, ATP-binding protein CbiO3 YP_002605941.1 ABC-type cobalt importer, ATP-binding protein CbiO4 YP_002605951.1 Uroporphyrinogen decarboxylase UroD YP_002605952.1 predicted cobalamin synthesis protein CobW YP_002605953.1 NAD-dependent deacetylase (Sir2 family) NpdA YP_002605961.1 acyl-CoA dehydrogenase Acd15 YP_002605962.1 TRAP-type C4-dicarboxylate transporter, periplasmic component DctP11 YP_002605963.1 TRAP-type C4-dicarboxylate permease, small subunit Dct11 YP_002605964.1 TRAP-type C4-dicarboxylate permease, large subunit DctM11 YP_002605965.1 proline racemase PrdF YP_002605970.1 lipoate-protein ligase A LplA YP_002605974.1 pyruvate dehydrogenase complex, beta subunit PdhB (E1 component) YP_002605975.1 pyruvate dehydrogenase complex, alpha subunit PdhA (E1 component) YP_002605977.1 dihydrolipoamide acetyltransferase PdhC (pyruvate dehydrogenase complex, E2 component) YP_002605984.1 NADH pyrophosphatase NudC YP_002605985.1 D-3-phosphoglycerate dehydrogenase (PGDH) SerA YP_002605988.1 amidophosphoribosyltransferase precursor PurF YP_002605989.1 carbamoyl-phosphate synthase, large subunit CarB2 YP_002605990.1 Carbamoyl-phosphate synthase small chain CarA YP_002605994.1 glutamate-ammonia-ligase adenylyltransferase GlnE YP_002605995.1 long-chain-fatty-acid--CoA ligase FadD7 (Acetyl-CoA-synthetase) (Acyl-activating enzyme) YP_002605996.1 long-chain-fatty-acid--CoA ligase FadD8 (Acetyl-CoA-synthetase) (Acyl-activating enzyme) YP_002605999.1 peptide chain release factor 2 (RF-2) PrfB YP_002606000.1 Transfers the fatty acyl group on membrane lipoproteins YP_002606022.1 octaprenyl-diphosphate synthase IspB YP_002606024.1 chaperone protein HtpG (heat shock protein) HtpG; molecular chaperone YP_002606026.1 Transketolase family protein Tkt10 YP_002606029.1 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_002606034.1 Zinc transporter ZitB YP_002606039.1 thioredoxin YP_002606041.1 transposition helper protein IstB YP_002606042.1 transposase for insertion sequences IS1326/IS1353 (IS21/IS408/IS1162 family protein) YP_002606045.1 outer membrane lipoprotein blc YP_002606048.1 predicted outer membrane protein YP_002606049.1 nodulation protein precursor NolG YP_002606053.1 3-hydroxyacyl-CoA dehydrogenase FadB YP_002606054.1 3-ketoacyl-CoA thiolase FadA (Acetyl-CoA acyltransferase) YP_002606056.1 predicted formate transporter FdhC YP_002606060.1 benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit HgdB YP_002606073.1 dehydrogenase CdfA YP_002606080.1 electron transfer flavoprotein, alpha-subunit EtfA4 (alpha-ETF) (ETFLS) YP_002606081.1 electron transfer flavoprotein, beta-subunit EftB4 (beta-ETF) (ETFSS) YP_002606082.1 short-chain specific acyl-CoA dehydrogenase/oxidase Acd16 (butyryl-CoA dehydrogenase) YP_002606084.1 high-affinity branched-chain amino acid transport ATP-binding protein LivF YP_002606085.1 High-affinity branched-chain amino acid transport ATP-binding protein livG YP_002606086.1 High-affinity branched-chain amino acid transport system permease protein LivM YP_002606087.1 putative branched chain amino acid ABC transporter, permease protein LivH YP_002606088.1 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor LivK YP_002606089.1 predicted acetylornithine deacetylase ArgE YP_002606106.1 transcriptional regulator HipA YP_002606109.1 killer suppression protein HigA YP_002606113.1 serine/threonine protein kinase PrkC YP_002606121.1 restriction endonuclease S HsdS YP_002606122.1 type I site-specific restriction modification enzyme, methylase subunit HsdM YP_002606131.1 acyl-CoA dehydrogenase Acd17 YP_002606132.1 ABC-type peptide transporter, periplasmic peptide-binding protein DppA YP_002606133.1 ABC-type peptide transporter, permease protein DppB YP_002606134.1 peptide ABC transporter, permease protein DppC YP_002606135.1 peptide ABC transporter, ATP-binding protein oppD YP_002606136.1 oligopeptide ABC-transporter, ATP-binding protein AppF YP_002606145.1 formate C-acetyltransferase PflD2 (Pyruvate formate-lyase 2) PflD2 YP_002606146.1 pyruvate formate-lyase, activating enzyme PflC2 YP_002606147.1 methylated-DNA--protein-cysteine methyltransferase Ogt YP_002606149.1 exodeoxyribonuclease V, alpha chain RecD YP_002606150.1 D,D-heptose 1,7-bisphosphate phosphatase GmhB YP_002606152.1 ATP-dependent protease La YP_002606155.1 pyruvate:ferredoxin oxidoreductase, subunit PorA4 YP_002606191.1 similar to FixL YP_002606195.1 similar to ResR from transposon Tn552; in Bacteroides fragilis this site-specific serine recombinase globally regulates a number of loci involved in capsular polysaccharide production