-- dump date 20140619_061110 -- class Genbank::CDS -- table cds_note -- id note YP_006428295.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; manually curated YP_006428296.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_006428297.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_006428298.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_006428300.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_006428301.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_006428302.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_006428303.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_006428304.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_006428305.1 PFAM: Transposase YP_006428306.1 PFAM: Integrase core domain YP_006428307.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain YP_006428308.1 PFAM: Methyltransferase domain YP_006428309.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006428311.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein YP_006428313.1 PFAM: Predicted permease YP_006428314.1 PFAM: ABC transporter YP_006428315.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat YP_006428316.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006428317.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006428318.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006428319.1 PFAM: FMN-binding domain YP_006428322.1 PFAM: Radical SAM superfamily; B12 binding domain YP_006428323.1 PFAM: Acetyltransferase (GNAT) family YP_006428324.1 PFAM: Spo0E like sporulation regulatory protein YP_006428325.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau YP_006428326.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_006428327.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_006428328.1 PFAM: SigmaK-factor processing regulatory protein BofA YP_006428329.1 PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_006428330.1 TIGRFAM: reductive dehalogenase; Tat (twin-arginine translocation) pathway signal sequence YP_006428332.1 PFAM: Cyclic nucleotide-binding domain YP_006428333.1 TIGRFAM: reductive dehalogenase YP_006428334.1 PFAM: FMN-binding domain YP_006428335.1 PFAM: Ferritin-like domain YP_006428336.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_006428337.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_006428338.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_006428339.1 PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain YP_006428340.1 TIGRFAM: DNA polymerase III, delta' subunit YP_006428341.1 PFAM: PSP1 C-terminal conserved region YP_006428342.1 PFAM: Protein of unknown function (DUF972) YP_006428343.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_006428344.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_006428345.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_006428346.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_006428347.1 PFAM: 3D domain; G5 domain YP_006428348.1 PFAM: 3D domain; Domain of unknown function (DUF348); G5 domain YP_006428349.1 PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_006428350.1 PFAM: Glycosyl hydrolases family 18 YP_006428351.1 PFAM: Toprim domain; TIGRFAM: ribonuclease M5 YP_006428352.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_006428353.1 PFAM: Methylenetetrahydrofolate reductase; Methylene-tetrahydrofolate reductase C terminal YP_006428354.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006428355.1 PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006428358.1 PFAM: Protein of unknown function (DUF1624) YP_006428359.1 PFAM: Glycosyl transferase family 2 YP_006428360.1 PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG YP_006428361.1 PFAM: L,D-transpeptidase catalytic domain YP_006428362.1 PFAM: Peptidase family S51; TIGRFAM: cyanophycinase YP_006428363.1 PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase YP_006428366.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_006428367.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006428368.1 PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type YP_006428369.1 PFAM: SpoVG YP_006428370.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_006428371.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_006428373.1 PFAM: Polyprenyl synthetase YP_006428374.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006428375.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006428376.1 PFAM: Response regulator receiver domain YP_006428377.1 PFAM: Helix-turn-helix YP_006428378.1 PFAM: Helix-turn-helix YP_006428379.1 PFAM: Protein of unknown function (DUF2922) YP_006428380.1 PFAM: Protein of unknown function (DUF1659) YP_006428381.1 PFAM: Protein of unknown function (DUF3102) YP_006428382.1 PFAM: PRC-barrel domain YP_006428383.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_006428384.1 PFAM: Protein of unknown function (DUF2872); TIGRFAM: YtoQ family protein YP_006428387.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_006428388.1 PFAM: PPIC-type PPIASE domain YP_006428389.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T YP_006428390.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_006428391.1 PFAM: Bacterial DNA-binding protein YP_006428392.1 PFAM: S4 domain YP_006428393.1 PFAM: YabP family; TIGRFAM: sporulation protein YabP YP_006428394.1 PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ; manually curated YP_006428395.1 PFAM: Sigma-70, region 4 YP_006428396.1 PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL YP_006428397.1 PFAM: S1 RNA binding domain YP_006428398.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E YP_006428399.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_006428400.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_006428401.1 PFAM: Nucleoside diphosphate kinase YP_006428402.1 PFAM: Bacterial protein of unknown function (DUF881) YP_006428403.1 PFAM: Bacterial protein of unknown function (DUF881) YP_006428404.1 PFAM: Formate--tetrahydrofolate ligase YP_006428405.1 PFAM: HD domain YP_006428406.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_006428407.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_006428408.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_006428409.1 PFAM: Domain of unknown function (DUF2520); Rossmann-like domain YP_006428410.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_006428411.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_006428412.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase YP_006428413.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_006428414.1 PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain YP_006428415.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_006428416.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_006428417.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_006428418.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_006428419.1 PFAM: Transposase domain (DUF772); manually curated YP_006428420.1 PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; D-alanine--poly(phosphoribitol) ligase, subunit 1 YP_006428421.1 PFAM: MBOAT family; TIGRFAM: D-alanyl-lipoteichoic acid biosynthesis protein DltB YP_006428422.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: D-alanine--poly(phosphoribitol) ligase, subunit 2 YP_006428423.1 PFAM: DltD central region; DltD C-terminal region; TIGRFAM: D-alanyl-lipoteichoic acid biosynthesis protein DltD YP_006428425.1 PFAM: Arylsulfotransferase (ASST) YP_006428426.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006428427.1 PFAM: Sugar (and other) transporter YP_006428429.1 PFAM: Bacterial transcription activator, effector binding domain YP_006428430.1 PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase YP_006428431.1 PFAM: Phage integrase family YP_006428432.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_006428436.1 PFAM: Glycosyl transferase family 2 YP_006428437.1 PFAM: Arginase family; TIGRFAM: agmatinase YP_006428438.1 PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain YP_006428439.1 PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase YP_006428440.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_006428441.1 PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC YP_006428442.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_006428443.1 PFAM: EamA-like transporter family YP_006428444.1 PFAM: Dihydrodipicolinate reductase, N-terminus; TIGRFAM: diaminopimelate dehydrogenase YP_006428445.1 PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_006428446.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family YP_006428447.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain YP_006428448.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006428450.1 PFAM: Predicted permease YP_006428451.1 PFAM: ABC transporter YP_006428457.1 PFAM: Rieske [2Fe-2S] domain YP_006428458.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_006428459.1 PFAM: Cytochrome b(C-terminal)/b6/petD YP_006428461.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain YP_006428463.1 PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies) YP_006428464.1 PFAM: NosL YP_006428466.1 PFAM: ABC transporter YP_006428467.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_006428468.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_006428469.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding YP_006428470.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_006428471.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_006428472.1 PFAM: Cell division protein ZapA YP_006428474.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006428475.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006428476.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006428477.1 PFAM: ABC transporter YP_006428478.1 PFAM: ABC transporter YP_006428479.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_006428480.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein YP_006428481.1 PFAM: Acetyltransferase (GNAT) family YP_006428482.1 PFAM: Metalloenzyme superfamily YP_006428483.1 PFAM: Collagenase; Peptidase family U32 YP_006428484.1 PFAM: MutS domain V; Smr domain; MutS domain III; TIGRFAM: MutS2 family protein YP_006428485.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_006428486.1 PFAM: FAD binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006428487.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006428489.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_006428490.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_006428492.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase YP_006428493.1 PFAM: Glycosyl transferase family 2 YP_006428494.1 PFAM: ATP-grasp domain YP_006428495.1 PFAM: NMT1/THI5 like YP_006428496.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006428497.1 PFAM: ABC transporter YP_006428498.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_006428499.1 PFAM: Rhodanese-like domain YP_006428500.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C) YP_006428501.1 PFAM: YeeE/YedE family (DUF395) YP_006428502.1 PFAM: SirA-like protein YP_006428503.1 PFAM: YeeE/YedE family (DUF395) YP_006428504.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: ModE molybdate transport repressor domain YP_006428505.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_006428506.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form YP_006428508.1 PFAM: Methyltransferase domain YP_006428511.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006428512.1 PFAM: OmpA family YP_006428513.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006428514.1 PFAM: Protein of unknown function (DUF328) YP_006428515.1 PFAM: Acetyltransferase (GNAT) family YP_006428516.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_006428517.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_006428519.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_006428520.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_006428521.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_006428522.1 non-canonical start codon YP_006428526.1 PFAM: Conserved hypothetical protein 698 YP_006428527.1 PFAM: Nitrate reductase gamma subunit YP_006428528.1 PFAM: Cysteine-rich domain YP_006428529.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain YP_006428531.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit YP_006428532.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit YP_006428535.1 PFAM: Nitrate reductase gamma subunit YP_006428538.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006428539.1 PFAM: Polysulphide reductase, NrfD YP_006428540.1 PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family YP_006428541.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) YP_006428542.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006428543.1 PFAM: Carbon-nitrogen hydrolase YP_006428545.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_006428546.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_006428547.1 PFAM: EamA-like transporter family YP_006428549.1 PFAM: YopX protein; TIGRFAM: phage uncharacterized protein TIGR01671 YP_006428550.1 PFAM: EamA-like transporter family YP_006428551.1 PFAM: Glycosyl transferase family 4 YP_006428553.1 PFAM: Bacterial regulatory proteins, gntR family YP_006428554.1 PFAM: ABC transporter YP_006428557.1 PFAM: Uncharacterized conserved protein (DUF2164) YP_006428558.1 PFAM: Methyltransferase domain YP_006428561.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006428562.1 PFAM: Acetyl xylan esterase (AXE1) YP_006428563.1 PFAM: Mor transcription activator family YP_006428564.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365) YP_006428565.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006428566.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006428567.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006428568.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; manually curated YP_006428569.1 PFAM: Nitrate reductase delta subunit YP_006428570.1 PFAM: FeoA domain; Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB YP_006428573.1 PFAM: FAD binding domain; FMN-binding domain; TIGRFAM: flavocytochrome c YP_006428575.1 PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase YP_006428576.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006428577.1 PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase; dihydroorotase, multifunctional complex type YP_006428578.1 PFAM: Major Facilitator Superfamily YP_006428579.1 PFAM: Asp/Glu/Hydantoin racemase YP_006428580.1 PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family YP_006428581.1 PFAM: Asp/Glu/Hydantoin racemase YP_006428583.1 PFAM: Cyclic nucleotide-binding domain YP_006428584.1 PFAM: Carbon-nitrogen hydrolase YP_006428585.1 PFAM: VTC domain YP_006428587.1 PFAM: CotH protein YP_006428588.1 PFAM: MBOAT family YP_006428590.1 PFAM: Metallo-beta-lactamase superfamily YP_006428591.1 PFAM: Glycosyl transferase family 2; PilZ domain YP_006428592.1 PFAM: Cellulase (glycosyl hydrolase family 5) YP_006428593.1 PFAM: Serpin (serine protease inhibitor) YP_006428594.1 PFAM: Acetyltransferase (GNAT) family YP_006428595.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; manually curated YP_006428596.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase YP_006428597.1 PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family YP_006428598.1 PFAM: Sugar (and other) transporter YP_006428599.1 PFAM: short chain dehydrogenase YP_006428600.1 PFAM: Carboxymuconolactone decarboxylase family YP_006428601.1 PFAM: Uncharacterised BCR, COG1937 YP_006428602.1 PFAM: Periplasmic binding protein YP_006428603.1 PFAM: FecCD transport family YP_006428604.1 PFAM: ABC transporter YP_006428605.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon YP_006428607.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein YP_006428608.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase YP_006428609.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006428610.1 PFAM: Response regulator receiver domain YP_006428612.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_006428613.1 PFAM: Sulfite exporter TauE/SafE YP_006428615.1 PFAM: Propanediol utilisation protein PduL YP_006428616.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: acetaldehyde dehydrogenase (acetylating) YP_006428617.1 PFAM: BMC domain YP_006428618.1 PFAM: BMC domain YP_006428619.1 PFAM: Ethanolamine utilisation protein EutQ YP_006428620.1 PFAM: BMC domain YP_006428621.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_006428622.1 PFAM: Ethanolamine utilisation protein EutN/carboxysome; manually curated YP_006428623.1 PFAM: Competence protein A; TIGRFAM: ethanolamine utilization protein EutJ family protein YP_006428624.1 PFAM: Amidohydrolase YP_006428625.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_006428626.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase YP_006428627.1 PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family YP_006428628.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_006428629.1 PFAM: DctM-like transporters; Tripartite ATP-independent periplasmic transporters, DctQ component; TIGRFAM: TRAP transporter, DctM subunit YP_006428630.1 PFAM: Citrate transporter YP_006428631.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_006428633.1 PFAM: Nitroreductase family YP_006428634.1 PFAM: Protein of unknown function DUF45 YP_006428636.1 PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL YP_006428637.1 PFAM: Predicted permease YP_006428638.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006428639.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006428640.1 PFAM: Putative lysophospholipase YP_006428641.1 PFAM: DUF218 domain YP_006428643.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_006428644.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_006428645.1 PFAM: NUDIX domain YP_006428646.1 PFAM: Major Facilitator Superfamily YP_006428647.1 PFAM: Rubrerythrin YP_006428648.1 PFAM: Major Facilitator Superfamily YP_006428649.1 PFAM: Universal stress protein family YP_006428651.1 PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR) YP_006428652.1 PFAM: UvrB/uvrC motif YP_006428653.1 PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain YP_006428654.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA) YP_006428655.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_006428657.1 PFAM: CarD-like/TRCF domain YP_006428658.1 PFAM: TRAM domain; PIN domain YP_006428659.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_006428660.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_006428661.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_006428662.1 PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_006428663.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_006428664.1 PFAM: RNase3 domain YP_006428665.1 PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent YP_006428666.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_006428667.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor YP_006428668.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_006428669.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_006428670.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_006428671.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_006428672.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_006428673.1 PFAM: Ribosomal protein L10 YP_006428674.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_006428675.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_006428676.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_006428677.1 PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family YP_006428678.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_006428679.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_006428680.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_006428681.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_006428682.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_006428683.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_006428684.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_006428685.1 PFAM: Ribosomal protein L23 YP_006428686.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_006428687.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_006428688.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_006428689.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_006428690.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_006428691.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_006428692.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_006428693.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_006428694.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_006428695.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_006428696.1 PFAM: Ribosomal protein S14p/S29e YP_006428697.1 PFAM: Ribosomal protein S8 YP_006428698.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_006428699.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_006428700.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_006428701.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_006428702.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_006428703.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_006428704.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_006428705.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_006428706.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_006428707.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_006428708.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_006428709.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_006428710.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_006428711.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_006428713.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006428714.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006428715.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006428716.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_006428717.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_006428718.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_006428719.1 PFAM: Major Facilitator Superfamily YP_006428720.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_006428722.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_006428723.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006428724.1 PFAM: Predicted permease YP_006428726.1 PFAM: ABC transporter YP_006428727.1 PFAM: ABC transporter substrate binding protein YP_006428728.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006428729.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006428730.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Contains selenocysteine; manually curated YP_006428731.1 PFAM: Nitrate reductase delta subunit YP_006428732.1 PFAM: 4Fe-4S binding domain YP_006428733.1 PFAM: Polysulphide reductase, NrfD YP_006428734.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_006428735.1 PFAM: Iron-containing alcohol dehydrogenase YP_006428736.1 PFAM: Protein of unknown function (DUF3102) YP_006428738.1 PFAM: HxlR-like helix-turn-helix YP_006428739.1 PFAM: Response regulator receiver domain YP_006428741.1 PFAM: Helix-turn-helix; manually curated YP_006428742.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006428743.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006428744.1 PFAM: Glycosyl hydrolases family 18; LysM domain YP_006428745.1 PFAM: Protein of unknown function (DUF1113) YP_006428747.1 PFAM: ABC transporter YP_006428748.1 PFAM: Predicted permease YP_006428749.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006428750.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006428751.1 PFAM: ABC transporter YP_006428752.1 PFAM: Predicted permease YP_006428754.1 PFAM: Nitrate reductase delta subunit YP_006428755.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006428756.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006428757.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006428759.1 PFAM: Predicted membrane protein (DUF2339) YP_006428760.1 PFAM: Major Facilitator Superfamily YP_006428761.1 PFAM: Transcriptional regulatory protein, C terminal YP_006428762.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006428763.1 PFAM: 4Fe-4S binding domain YP_006428765.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006428768.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain; ATP-dependent DNA ligase LigD polymerase module YP_006428771.1 PFAM: Helicase conserved C-terminal domain; HIRAN domain; DEAD/DEAH box helicase YP_006428772.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_006428774.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_006428775.1 PFAM: Iron-containing alcohol dehydrogenase YP_006428776.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006428777.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain YP_006428778.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_006428779.1 PFAM: short chain dehydrogenase YP_006428780.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006428781.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006428782.1 PFAM: Tripartite tricarboxylate transporter TctB family YP_006428783.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_006428784.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_006428785.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006428786.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_006428787.1 PFAM: Thioredoxin YP_006428789.1 PFAM: Helicase conserved C-terminal domain YP_006428790.1 PFAM: Domain of unknown function (DUF1998) YP_006428791.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_006428792.1 PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr YP_006428794.1 PFAM: Protein of unknown function (DUF2813) YP_006428795.1 PFAM: UvrD/REP helicase YP_006428797.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_006428798.1 PFAM: Domain of unknown function (DUF955) YP_006428802.1 PFAM: YheO-like PAS domain YP_006428803.1 PFAM: Group II intron, maturase-specific domain; manually curated YP_006428804.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_006428805.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family YP_006428806.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase YP_006428807.1 PFAM: Sodium:dicarboxylate symporter family YP_006428808.1 PFAM: Na+/H+ antiporter family YP_006428810.1 PFAM: Protein of unknown function (DUF2281) YP_006428811.1 PFAM: Protein of unknown function (DUF2922) YP_006428812.1 PFAM: Protein of unknown function (DUF1659) YP_006428813.1 PFAM: Protein of unknown function (DUF3102) YP_006428815.1 PFAM: Region found in RelA / SpoT proteins YP_006428817.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: pyrrolysyl-tRNA synthetase, C-terminal region YP_006428818.1 PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; methylmalonyl-CoA mutase C-terminal domain YP_006428819.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_006428820.1 PFAM: Pterin binding enzyme YP_006428821.1 PFAM: Radical SAM superfamily; TIGRFAM: pyrrolysine biosynthesis radical SAM protein YP_006428822.1 PFAM: ATP-grasp domain; TIGRFAM: pyrrolysine biosynthesis protein PylC YP_006428823.1 TIGRFAM: pyrrolysine biosynthesis protein PylD YP_006428824.1 TIGRFAM: pyrrolysyl-tRNA synthetase, N-terminal region YP_006428831.1 PFAM: DeoR-like helix-turn-helix domain YP_006428832.1 PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain YP_006428833.1 PFAM: Bacterial Ig-like domain (group 2) YP_006428835.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_006428836.1 PFAM: Ribosomal protein S9/S16 YP_006428837.1 PFAM: LysM domain YP_006428838.1 PFAM: Bacterial regulatory proteins, tetR family YP_006428839.1 PFAM: Bacterial regulatory proteins, tetR family YP_006428840.1 PFAM: FAD binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; flavocytochrome c YP_006428841.1 PFAM: FMN-binding domain YP_006428842.1 PFAM: Penicillinase repressor YP_006428843.1 PFAM: BlaR1 peptidase M56 YP_006428845.1 PFAM: MBOAT family YP_006428847.1 PFAM: Bacterial trigger factor protein (TF) C-terminus YP_006428848.1 PFAM: Cyclic nucleotide-binding domain YP_006428849.1 PFAM: Protein of unknown function (DUF2869) YP_006428850.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_006428852.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: reductive dehalogenase YP_006428853.1 PFAM: FMN-binding domain YP_006428855.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_006428856.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006428857.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_006428858.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_006428859.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: [FeFe] hydrogenase, group A YP_006428860.1 PFAM: YopX protein YP_006428861.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_006428862.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup YP_006428863.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_006428864.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein YP_006428865.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC YP_006428866.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuD YP_006428867.1 PFAM: ABC transporter; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein YP_006428868.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_006428869.1 PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_006428871.1 PFAM: Sigma-70, region 4 YP_006428872.1 PFAM: YceG-like family YP_006428873.1 PFAM: Arginase family; TIGRFAM: arginase YP_006428874.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006428876.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_006428877.1 PFAM: Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD YP_006428881.1 PFAM: Protein of unknown function (DUF1212) YP_006428882.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_006428883.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_006428884.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_006428885.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases YP_006428886.1 PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006428887.1 PFAM: FAD binding domain; FMN-binding domain; TIGRFAM: flavocytochrome c YP_006428888.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006428889.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006428890.1 PFAM: FAD binding domain YP_006428891.1 PFAM: Bacterial regulatory proteins, tetR family YP_006428892.1 PFAM: Helix-turn-helix YP_006428894.1 PFAM: FAD binding domain YP_006428896.1 PFAM: Golgi phosphoprotein 3 (GPP34) YP_006428898.1 PFAM: SPFH domain / Band 7 family YP_006428899.1 PFAM: Putative cell wall binding repeat 2; Bacterial Ig-like domain (group 4); VanW like protein YP_006428900.1 PFAM: Cupin domain YP_006428902.1 PFAM: Major Facilitator Superfamily YP_006428904.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_006428905.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_006428906.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_006428907.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase YP_006428908.1 PFAM: NAD synthase; TIGRFAM: NAD+ synthetase YP_006428909.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_006428910.1 PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) YP_006428911.1 PFAM: Nitrous oxide-stimulated promoter YP_006428912.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; manually curated YP_006428913.1 PFAM: Prokaryotic cytochrome b561 YP_006428914.1 PFAM: Nickel-dependent hydrogenase YP_006428915.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA) YP_006428917.1 PFAM: Aminotransferase class-V YP_006428920.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain YP_006428921.1 PFAM: SPFH domain / Band 7 family YP_006428923.1 PFAM: Major Facilitator Superfamily YP_006428924.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_006428925.1 PFAM: Bacterial capsule synthesis protein PGA_cap YP_006428927.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_006428928.1 PFAM: Glycosyl transferases group 1 YP_006428933.1 PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family YP_006428934.1 PFAM: Domain of unknown function (DUF362) YP_006428935.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_006428936.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein YP_006428937.1 PFAM: YbbR-like protein YP_006428938.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006428939.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_006428940.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_006428943.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006428944.1 PFAM: Protein of unknown function (DUF1446) YP_006428946.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_006428947.1 PFAM: Sodium:dicarboxylate symporter family; manually curated YP_006428948.1 PFAM: Homocysteine S-methyltransferase YP_006428949.1 PFAM: Metallo-beta-lactamase superfamily YP_006428950.1 PFAM: Cellulose binding domain YP_006428954.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_006428955.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_006428956.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_006428957.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type YP_006428959.1 PFAM: Peptidase S24-like YP_006428960.1 PFAM: Thioredoxin YP_006428961.1 PFAM: Thioredoxin; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_006428963.1 PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family YP_006428964.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006428965.1 PFAM: Uncharacterised BCR, COG1937 YP_006428968.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006428969.1 PFAM: Thioredoxin YP_006428970.1 PFAM: Thioredoxin; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_006428971.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme YP_006428976.1 PFAM: Protein of unknown function (DUF2974) YP_006428977.1 PFAM: Protein of unknown function (DUF1232) YP_006428978.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_006428980.1 PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family YP_006428981.1 PFAM: Universal stress protein family YP_006428982.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YP_006428983.1 PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain YP_006428984.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_006428985.1 PFAM: LemA family YP_006428986.1 PFAM: Domain of unknown function (DUF477) YP_006428987.1 PFAM: Domain of unknown function DUF77 YP_006428988.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006428989.1 PFAM: NMT1/THI5 like YP_006428990.1 PFAM: ABC transporter YP_006428991.1 PFAM: Sporulation and spore germination YP_006428992.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein YP_006428993.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006428994.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein YP_006428995.1 PFAM: Xylose isomerase-like TIM barrel YP_006428996.1 PFAM: Cupin domain YP_006428997.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_006428998.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_006428999.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_006429000.1 PFAM: Citrate synthase YP_006429002.1 PFAM: Radical SAM superfamily; B12 binding domain YP_006429003.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429004.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ) YP_006429005.1 PFAM: Protein of unknown function (DUF2953) YP_006429007.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006429008.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006429010.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase YP_006429011.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429012.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365) YP_006429013.1 PFAM: Amidohydrolase YP_006429014.1 TIGRFAM: MSMEG_0572 family protein YP_006429015.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, MSMEG_0568 family YP_006429016.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: putative N-acetyltransferase, MSMEG_0567 N-terminal domain family YP_006429017.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: AIR synthase-related protein, sll0787 family YP_006429018.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_006429019.1 PFAM: Cysteine-rich domain YP_006429020.1 PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase YP_006429021.1 PFAM: Protein of unknown function (DUF1116) YP_006429022.1 PFAM: CoA binding domain; CoA-ligase YP_006429023.1 PFAM: Glycosyl transferases group 1; TIGRFAM: glycosyltransferase, MSMEG_0565 family YP_006429024.1 PFAM: Protein of unknown function (DUF2877) YP_006429025.1 PFAM: Metallo-beta-lactamase superfamily YP_006429026.1 PFAM: NMT1/THI5 like YP_006429027.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006429028.1 PFAM: ABC transporter YP_006429029.1 PFAM: Carboxyl transferase domain; manually curated YP_006429030.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429031.1 PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter YP_006429033.1 PFAM: Accessory gene regulator B YP_006429034.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_006429035.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_006429036.1 PFAM: Nitroreductase family YP_006429037.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal YP_006429038.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_006429039.1 PFAM: Bacterial regulatory protein, arsR family YP_006429041.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_006429043.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: reductive dehalogenase; Tat (twin-arginine translocation) pathway signal sequence YP_006429044.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006429045.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006429046.1 PFAM: Major Facilitator Superfamily YP_006429047.1 PFAM: Aldehyde dehydrogenase family YP_006429048.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_006429049.1 PFAM: SCP-2 sterol transfer family YP_006429050.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: sulfoacetaldehyde acetyltransferase YP_006429051.1 PFAM: Mechanosensitive ion channel YP_006429052.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_006429053.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_006429054.1 PFAM: Cupin domain; Helix-turn-helix YP_006429055.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_006429056.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit YP_006429057.1 PFAM: PemK-like protein YP_006429059.1 PFAM: B3/4 domain YP_006429062.1 PFAM: RibD C-terminal domain YP_006429069.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_006429072.1 PFAM: HicB family; Uncharacterised protein family (UPF0150) YP_006429079.1 PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism; uncharacterized domain HDIG YP_006429081.1 PFAM: HNH endonuclease YP_006429087.1 PFAM: HNH endonuclease YP_006429090.1 PFAM: SpoU rRNA Methylase family YP_006429091.1 PFAM: Beta-lactamase YP_006429094.1 PFAM: B3/4 domain YP_006429095.1 PFAM: Methyltransferase domain YP_006429097.1 PFAM: Thioesterase superfamily YP_006429098.1 PFAM: SpoU rRNA Methylase family YP_006429102.1 PFAM: YcfA-like protein YP_006429103.1 PFAM: HicB family; Uncharacterised protein family (UPF0150) YP_006429104.1 PFAM: HDOD domain YP_006429105.1 PFAM: Methyltransferase domain YP_006429107.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase, HisJ family YP_006429109.1 PFAM: Acetyltransferase (GNAT) family YP_006429111.1 PFAM: Acetyltransferase (GNAT) family YP_006429116.1 PFAM: Acetyltransferase (GNAT) family YP_006429119.1 PFAM: Calcineurin-like phosphoesterase YP_006429120.1 PFAM: Transcriptional regulator PadR-like family YP_006429121.1 PFAM: Cell cycle protein YP_006429122.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_006429123.1 PFAM: Acetyltransferase (GNAT) family YP_006429125.1 PFAM: Acetyltransferase (GNAT) family YP_006429126.1 PFAM: Helix-turn-helix; Tellurite resistance protein TehB YP_006429129.1 PFAM: Acetyltransferase (GNAT) family YP_006429132.1 PFAM: Acetyltransferase (GNAT) family YP_006429136.1 PFAM: MoaE protein YP_006429142.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_006429143.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_006429144.1 PFAM: Response regulator receiver domain; ANTAR domain YP_006429145.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; TIGRFAM: [FeFe] hydrogenase, group B1/B3 YP_006429147.1 PFAM: BioY family YP_006429148.1 PFAM: ABC transporter YP_006429149.1 PFAM: Cobalt transport protein YP_006429151.1 PFAM: Protein of unknown function (DUF820) YP_006429152.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase YP_006429154.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429155.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429157.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006429158.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006429160.1 PFAM: DNA polymerase III polC-type N-terminus; Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha chain, Gram-positive type YP_006429161.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type YP_006429162.1 PFAM: Metallo-beta-lactamase superfamily YP_006429163.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006429164.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006429165.1 PFAM: Major Facilitator Superfamily YP_006429166.1 PFAM: CoA-transferase family III YP_006429167.1 PFAM: Electron transfer flavoprotein domain YP_006429168.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_006429169.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006429170.1 PFAM: Major Facilitator Superfamily YP_006429171.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_006429172.1 PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03084 family protein; uncharacterized Actinobacterial protein TIGR03083 YP_006429173.1 PFAM: AMP-binding enzyme YP_006429174.1 PFAM: CoA-transferase family III YP_006429177.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006429179.1 PFAM: Polysulphide reductase, NrfD YP_006429180.1 PFAM: HD domain YP_006429181.1 PFAM: Metallo-beta-lactamase superfamily YP_006429182.1 PFAM: CBS domain YP_006429183.1 PFAM: Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region YP_006429184.1 PFAM: Memo-like protein YP_006429185.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_006429186.1 PFAM: Cupin domain YP_006429187.1 PFAM: Cupin domain; Helix-turn-helix YP_006429188.1 PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein YP_006429189.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_006429190.1 PFAM: VTC domain YP_006429192.1 PFAM: CotH protein YP_006429193.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein YP_006429195.1 PFAM: Protein of unknown function (DUF1469) YP_006429197.1 PFAM: ABC transporter YP_006429198.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006429199.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006429200.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006429201.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11 YP_006429202.1 PFAM: Nitrogen regulatory protein P-II YP_006429203.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_006429204.1 PFAM: Domain of unknown function (DUF1858); TIGRFAM: hybrid cluster protein-associated redox disulfide domain YP_006429206.1 PFAM: Small Multidrug Resistance protein YP_006429207.1 PFAM: Small Multidrug Resistance protein YP_006429208.1 PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase YP_006429210.1 PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein YP_006429211.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_006429212.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_006429213.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_006429214.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase, medium form YP_006429215.1 PFAM: Uncharacterised ACR, COG2135 YP_006429216.1 PFAM: Beta-eliminating lyase YP_006429217.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_006429218.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain YP_006429220.1 PFAM: ABC transporter YP_006429221.1 PFAM: Protein of unknown function(DUF2089) YP_006429224.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_006429226.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006429227.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006429228.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006429229.1 PFAM: Protein of unknown function (DUF3298) YP_006429230.1 PFAM: ABC transporter YP_006429231.1 PFAM: CcmB protein YP_006429232.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006429233.1 PFAM: Predicted integral membrane protein (DUF2275) YP_006429234.1 PFAM: Major Facilitator Superfamily YP_006429235.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006429236.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein YP_006429239.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429241.1 PFAM: NADPH-dependent FMN reductase YP_006429242.1 PFAM: ACT domain YP_006429243.1 PFAM: Uncharacterized ACR (DUF711) YP_006429244.1 PFAM: Cupin domain YP_006429245.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_006429246.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase) YP_006429247.1 PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP) YP_006429248.1 PFAM: Metallo-beta-lactamase superfamily YP_006429249.1 PFAM: Protein of unknown function (DUF3006) YP_006429250.1 PFAM: Peptidase family M23; G5 domain; LysM domain YP_006429251.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_006429252.1 PFAM: MarR family YP_006429254.1 PFAM: Helix-turn-helix YP_006429255.1 PFAM: Protein of unknown function (DUF1538) YP_006429256.1 PFAM: Nitrogen regulatory protein P-II YP_006429257.1 PFAM: Protein of unknown function (DUF2500) YP_006429259.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_006429260.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_006429261.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_006429262.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006429264.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_006429265.1 PFAM: Phage integrase family YP_006429266.1 PFAM: Domain of unknown function (DUF955) YP_006429267.1 PFAM: Helix-turn-helix YP_006429268.1 PFAM: Helix-turn-helix YP_006429287.1 PFAM: 3D domain YP_006429288.1 PFAM: Viral (Superfamily 1) RNA helicase; TIGRFAM: helicase, putative, RecD/TraA family YP_006429289.1 PFAM: CHC2 zinc finger YP_006429296.1 TIGRFAM: phage transcriptional activator, RinA family YP_006429301.1 PFAM: Phage terminase small subunit; Terminase small subunit YP_006429302.1 PFAM: Terminase-like family; TIGRFAM: phage terminase, large subunit, PBSX family YP_006429303.1 PFAM: Phage portal protein, SPP1 Gp6-like; TIGRFAM: phage portal protein, SPP1 family YP_006429304.1 PFAM: AP2 domain YP_006429305.1 PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_006429307.1 PFAM: Phage minor structural protein GP20 YP_006429309.1 PFAM: Phage major capsid protein E YP_006429316.1 PFAM: Phage tail sheath protein YP_006429317.1 PFAM: Protein of unknown function (DUF2001) YP_006429318.1 PFAM: Phage regulatory protein Rha (Phage_pRha) YP_006429320.1 PFAM: Phage XkdN-like protein YP_006429324.1 PFAM: LysM domain YP_006429325.1 PFAM: Phage late control gene D protein (GPD) YP_006429326.1 PFAM: Protein of unknown function (DUF2577) YP_006429327.1 PFAM: Protein of unknown function (DUF2634) YP_006429328.1 PFAM: Baseplate J-like protein YP_006429329.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2313) YP_006429335.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_006429343.1 PFAM: Helix-turn-helix YP_006429344.1 PFAM: SNARE associated Golgi protein YP_006429347.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_006429348.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006429349.1 PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family YP_006429350.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1 YP_006429351.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_006429352.1 PFAM: Na+/H+ ion antiporter subunit YP_006429353.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006429354.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_006429355.1 PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: monovalent cation:proton antiporter YP_006429356.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: Tmonovalent cation:proton antiporter; TC 2.A.63.1 YP_006429357.1 PFAM: Universal stress protein family YP_006429358.1 PFAM: Phage integrase family YP_006429359.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_006429360.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_006429361.1 PFAM: Major Facilitator Superfamily YP_006429363.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase YP_006429364.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hydroxypyruvate isomerase YP_006429365.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_006429366.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family YP_006429367.1 PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase, multifunctional complex type YP_006429368.1 PFAM: Amidohydrolase family; TIGRFAM: allantoinase; dihydroorotase, multifunctional complex type YP_006429369.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family YP_006429370.1 PFAM: Endoribonuclease L-PSP YP_006429371.1 PFAM: Ureidoglycolate hydrolase YP_006429372.1 PFAM: Cupin domain; TIGRFAM: putative allantoin catabolism protein YP_006429373.1 PFAM: Purine catabolism regulatory protein-like family YP_006429374.1 PFAM: Nitroreductase family YP_006429375.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_006429376.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB YP_006429377.1 PFAM: Polysaccharide deacetylase YP_006429379.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily YP_006429380.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_006429381.1 PFAM: PspC domain YP_006429383.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form YP_006429384.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_006429385.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006429388.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429389.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_006429390.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429393.1 TIGRFAM: phosphate binding protein YP_006429394.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA YP_006429395.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_006429396.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_006429397.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_006429398.1 PFAM: Protein of unknown function (DUF2837) YP_006429400.1 PFAM: Calcineurin-like phosphoesterase YP_006429401.1 PFAM: short chain dehydrogenase YP_006429402.1 PFAM: AMP-binding enzyme YP_006429405.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein YP_006429408.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase YP_006429413.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_006429415.1 PFAM: Protein of unknown function (DUF1697) YP_006429416.1 PFAM: Metallo-beta-lactamase superfamily YP_006429419.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_006429421.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006429422.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006429423.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006429424.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_006429425.1 PFAM: ABC transporter YP_006429426.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429427.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365) YP_006429428.1 PFAM: Nitrate reductase delta subunit YP_006429429.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006429430.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006429431.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006429432.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence YP_006429433.1 PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006429434.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006429435.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006429436.1 PFAM: Ferric reductase like transmembrane component YP_006429437.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365) YP_006429438.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429439.1 PFAM: ResB-like family YP_006429440.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_006429442.1 PFAM: 4Fe-4S binding domain; TIGRFAM: ferredoxin-type protein NapF; MauM/NapG family ferredoxin-type protein YP_006429444.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006429445.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family; ferredoxin-type protein NapF; MauM/NapG family ferredoxin-type protein; manually curated YP_006429446.1 PFAM: Phospholipase D Active site motif YP_006429447.1 PFAM: MarR family YP_006429448.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_006429449.1 PFAM: Glycosyl transferase family 8 YP_006429450.1 PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD YP_006429451.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit YP_006429452.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase YP_006429453.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase YP_006429454.1 PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal YP_006429455.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase YP_006429456.1 PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase YP_006429457.1 PFAM: CbiX YP_006429458.1 PFAM: Precorrin-8X methylmutase YP_006429459.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ YP_006429460.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD YP_006429461.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) YP_006429462.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_006429463.1 PFAM: GHMP kinases N terminal domain YP_006429464.1 PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase YP_006429466.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_006429467.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_006429468.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydD subunit YP_006429469.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydC subunit YP_006429470.1 PFAM: Citrate transporter YP_006429473.1 PFAM: Protein of unknown function (DUF2935) YP_006429475.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_006429477.1 PFAM: PspC domain YP_006429479.1 PFAM: Putative cell wall binding repeat 2 YP_006429480.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_006429481.1 PFAM: Beta-eliminating lyase; TIGRFAM: tryptophanase, leader peptide-associated YP_006429482.1 PFAM: Amino acid permease YP_006429483.1 PFAM: Sigma-54 interaction domain; PAS fold YP_006429484.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal YP_006429485.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; Tar ligand binding domain homologue YP_006429486.1 PFAM: Manganese containing catalase YP_006429487.1 PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family YP_006429488.1 PFAM: Predicted RNA-binding protein YP_006429490.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme YP_006429491.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_006429492.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_006429493.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family YP_006429495.1 PFAM: Lysine-2,3-aminomutase; TIGRFAM: KamA family protein YP_006429496.1 PFAM: Bacterial regulatory proteins, gntR family; TrkA-C domain YP_006429497.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006429498.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase YP_006429499.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region YP_006429500.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_006429501.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006429502.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006429503.1 PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain YP_006429504.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain YP_006429505.1 PFAM: Ribbon-helix-helix protein, copG family YP_006429506.1 PFAM: PemK-like protein YP_006429507.1 PFAM: Peptidase C26 YP_006429508.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006429509.1 PFAM: DoxX YP_006429510.1 PFAM: Nitroreductase family YP_006429511.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429512.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429513.1 PFAM: ThiF family YP_006429514.1 PFAM: Predicted membrane protein (DUF2318) YP_006429515.1 PFAM: ABC transporter YP_006429516.1 PFAM: Predicted permease YP_006429517.1 PFAM: Predicted permease YP_006429519.1 PFAM: Acetyltransferase (GNAT) family YP_006429520.1 PFAM: Protein of unknown function (DUF2809) YP_006429521.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429522.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_006429523.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_006429525.1 PFAM: NAD synthase; TIGRFAM: TIGR00268 family protein YP_006429526.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain YP_006429528.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_006429529.1 PFAM: Amidohydrolase family YP_006429530.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_006429531.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_006429532.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_006429533.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_006429534.1 PFAM: Membrane protein of unknown function (DUF340) YP_006429535.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_006429536.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_006429537.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_006429538.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; Contains selenocysteine; manually curated YP_006429540.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_006429541.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_006429542.1 PFAM: MOSC domain YP_006429543.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_006429544.1 PFAM: Protein of unknown function DUF88 YP_006429545.1 PFAM: Chaperonin 10 Kd subunit YP_006429546.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_006429547.1 PFAM: Helix-turn-helix YP_006429548.1 PFAM: Helix-turn-helix YP_006429549.1 TIGRFAM: phage transcriptional activator, RinA family YP_006429553.1 PFAM: Phage tail sheath protein YP_006429554.1 PFAM: Protein of unknown function (DUF2001) YP_006429555.1 PFAM: Phage XkdN-like protein YP_006429557.1 PFAM: LysM domain YP_006429558.1 PFAM: Phage late control gene D protein (GPD) YP_006429559.1 PFAM: Protein of unknown function (DUF2577) YP_006429560.1 PFAM: Protein of unknown function (DUF2634) YP_006429561.1 PFAM: Baseplate J-like protein YP_006429562.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2313) YP_006429572.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_006429575.1 PFAM: Protein of unknown function (DUF3231) YP_006429579.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_006429580.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_006429582.1 PFAM: Putative cell wall binding repeat 2 YP_006429583.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II YP_006429584.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_006429585.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase YP_006429586.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_006429587.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_006429588.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_006429589.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_006429590.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_006429591.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_006429592.1 PFAM: Manganese containing catalase YP_006429593.1 PFAM: Sugar (and other) transporter; TIGRFAM: benzoate transport YP_006429595.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_006429596.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006429597.1 PFAM: ABC transporter; NIL domain YP_006429598.1 PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD YP_006429599.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit YP_006429606.1 PFAM: SEFIR domain YP_006429607.1 PFAM: Caspase domain YP_006429609.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase YP_006429610.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_006429611.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_006429612.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_006429613.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_006429614.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_006429615.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_006429616.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase YP_006429617.1 PFAM: ApbE family YP_006429618.1 PFAM: Protein of unknown function (DUF1312) YP_006429619.1 PFAM: Heptaprenyl diphosphate synthase component I YP_006429622.1 PFAM: ApbE family YP_006429623.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_006429625.1 PFAM: Cyclic nucleotide-binding domain YP_006429626.1 PFAM: Rhodanese-like domain YP_006429627.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006429628.1 PFAM: 4Fe-4S binding domain YP_006429629.1 PFAM: Polysulphide reductase, NrfD YP_006429630.1 PFAM: Nitrate reductase delta subunit YP_006429631.1 PFAM: Rhodanese-like domain YP_006429632.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA YP_006429633.1 PFAM: DHH family; DRTGG domain; DHHA2 domain; CBS domain YP_006429634.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_006429635.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_006429636.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_006429637.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_006429638.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429639.1 PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV YP_006429640.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type YP_006429641.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_006429642.1 PFAM: Sodium:solute symporter family YP_006429644.1 PFAM: Protein of unknown function (Gmx_para_CXXCG) YP_006429645.1 PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein YP_006429646.1 PFAM: ABC transporter YP_006429648.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_006429649.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_006429651.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_006429652.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006429653.1 PFAM: ABC transporter YP_006429654.1 PFAM: Predicted permease YP_006429656.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_006429657.1 PFAM: Saccharopine dehydrogenase YP_006429658.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: carboxynorspermidine decarboxylase YP_006429660.1 PFAM: Protein of unknown function (DUF1696) YP_006429662.1 PFAM: ABC transporter; manually curated YP_006429663.1 PFAM: Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006429665.1 PFAM: CAAX amino terminal protease family YP_006429666.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_006429667.1 PFAM: Recombinase; Resolvase, N terminal domain YP_006429668.1 TIGRFAM: DNA binding domain, excisionase family YP_006429671.1 PFAM: Transposase, Mutator family YP_006429673.1 PFAM: Protein of unknown function (DUF1413) YP_006429680.1 PFAM: Metallo-beta-lactamase superfamily YP_006429682.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429683.1 PFAM: CheW-like domain YP_006429684.1 PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG YP_006429685.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold YP_006429686.1 PFAM: Response regulator receiver domain; Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal YP_006429687.1 PFAM: Protein of unknown function (DUF3102) YP_006429689.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase YP_006429690.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429691.1 TIGRFAM: TIGR04076 family protein YP_006429693.1 PFAM: PAP2 superfamily YP_006429694.1 PFAM: Acetyltransferase (GNAT) family YP_006429695.1 PFAM: Uncharacterised protein family (UPF0157) YP_006429696.1 PFAM: Acetyltransferase (GNAT) family YP_006429697.1 PFAM: Transposase, Mutator family YP_006429698.1 PFAM: NADPH-dependent FMN reductase YP_006429699.1 PFAM: HxlR-like helix-turn-helix YP_006429700.1 PFAM: Sulfite exporter TauE/SafE YP_006429701.1 PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent YP_006429703.1 PFAM: Methyltransferase domain YP_006429704.1 PFAM: NADPH-dependent FMN reductase YP_006429706.1 PFAM: Protein of unknown function, DUF606 YP_006429707.1 PFAM: RibD C-terminal domain YP_006429709.1 PFAM: Protein of unknown function (DUF2935) YP_006429712.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_006429713.1 PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain YP_006429714.1 PFAM: EamA-like transporter family YP_006429715.1 PFAM: Bacterial regulatory proteins, gntR family YP_006429716.1 PFAM: Protein of unknown function (DUF1648) YP_006429720.1 PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain YP_006429721.1 PFAM: Protein of unknown function (DUF1659) YP_006429722.1 PFAM: Protein of unknown function (DUF3102); manually curated YP_006429723.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_006429724.1 PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: probable dihydroxyacetone kinase regulator YP_006429725.1 PFAM: Streptococcal 67 kDa myosin-cross-reactive antigen like family YP_006429726.1 PFAM: short chain dehydrogenase YP_006429728.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006429731.1 PFAM: Desulfoferrodoxin; Helix-turn-helix YP_006429732.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_006429733.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_006429735.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM YP_006429736.1 PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ YP_006429737.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit YP_006429738.1 PFAM: Metallo-beta-lactamase superfamily YP_006429739.1 PFAM: HxlR-like helix-turn-helix YP_006429740.1 PFAM: Nitroreductase family YP_006429741.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006429742.1 PFAM: HxlR-like helix-turn-helix YP_006429743.1 PFAM: Pirin YP_006429744.1 PFAM: Acetyltransferase (GNAT) family YP_006429745.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429747.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006429748.1 PFAM: 4Fe-4S binding domain YP_006429749.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006429750.1 PFAM: Amidohydrolase family YP_006429751.1 PFAM: ABC transporter YP_006429754.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429755.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429757.1 PFAM: EamA-like transporter family YP_006429758.1 PFAM: Uncharacterized conserved protein (DUF2304) YP_006429759.1 PFAM: Glycosyl transferase family 2 YP_006429760.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006429761.1 PFAM: LrgA family YP_006429762.1 PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein YP_006429763.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254 YP_006429765.1 PFAM: Protein of unknown function(DUF2089) YP_006429766.1 PFAM: Helix-turn-helix YP_006429769.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429770.1 PFAM: Metallo-beta-lactamase superfamily YP_006429771.1 PFAM: Acetyltransferase (GNAT) family YP_006429772.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_006429774.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006429775.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429776.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429778.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429782.1 PFAM: Sortase family; TIGRFAM: sortase, SrtB family YP_006429784.1 PFAM: Protein of unknown function (DUF421) YP_006429785.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006429786.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006429787.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases YP_006429788.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006429789.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006429790.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006429791.1 PFAM: DNA alkylation repair enzyme YP_006429792.1 PFAM: UvrD/REP helicase YP_006429793.1 PFAM: Protein of unknown function DUF134 YP_006429794.1 PFAM: ParA/MinD ATPase like YP_006429795.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_006429797.1 PFAM: Protein of unknown function (DUF1312) YP_006429798.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_006429799.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_006429800.1 PFAM: Protein of unknown function (DUF2680) YP_006429802.1 PFAM: Transglutaminase-like superfamily YP_006429803.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429804.1 PFAM: ABC transporter YP_006429808.1 PFAM: Protein of unknown function (DUF2680) YP_006429809.1 PFAM: Iron-containing alcohol dehydrogenase YP_006429810.1 PFAM: Aldehyde dehydrogenase family YP_006429811.1 PFAM: FaeA-like protein YP_006429812.1 PFAM: MarR family YP_006429813.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_006429814.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_006429815.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006429816.1 PFAM: MarR family YP_006429817.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429818.1 PFAM: Sodium/hydrogen exchanger family YP_006429819.1 PFAM: Transcriptional regulator PadR-like family YP_006429820.1 PFAM: Protein of unknown function (DUF1129) YP_006429821.1 PFAM: Isochorismatase family YP_006429822.1 PFAM: Predicted metallopeptidase (DUF2201) YP_006429823.1 PFAM: AAA domain (dynein-related subfamily) YP_006429825.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_006429827.1 PFAM: Small Multidrug Resistance protein YP_006429830.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_006429831.1 PFAM: Radical SAM superfamily YP_006429832.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_006429833.1 PFAM: Uncharacterized conserved protein (DUF2075) YP_006429835.1 PFAM: Sporulation initiation factor Spo0A C terminal YP_006429836.1 PFAM: Protein of unknown function (DUF2922) YP_006429837.1 PFAM: Protein of unknown function (DUF1659) YP_006429838.1 PFAM: Uncharacterised protein family (UPF0150) YP_006429839.1 PFAM: Protein of unknown function (DUF3102) YP_006429840.1 PFAM: Ribosomal RNA adenine dimethylase YP_006429841.1 PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI YP_006429842.1 PFAM: short chain dehydrogenase YP_006429843.1 PFAM: Ribosomal RNA adenine dimethylase YP_006429844.1 PFAM: Metal binding domain of Ada YP_006429845.1 PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_006429846.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429847.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429848.1 PFAM: ABC transporter YP_006429849.1 PFAM: Predicted permease YP_006429850.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase, HisJ family YP_006429852.1 PFAM: HD domain YP_006429853.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429854.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006429857.1 TIGRFAM: ABC transporter efflux protein, DrrB family YP_006429858.1 PFAM: ABC transporter YP_006429859.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429860.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_006429861.1 PFAM: HxlR-like helix-turn-helix YP_006429862.1 PFAM: PAP2 superfamily YP_006429863.1 PFAM: PAP2 superfamily YP_006429864.1 PFAM: Methyltransferase domain YP_006429865.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006429866.1 PFAM: Chloramphenicol phosphotransferase-like protein YP_006429868.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_006429873.1 PFAM: Bacterial type II secretion system protein F domain YP_006429874.1 PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein YP_006429875.1 PFAM: Bacterial transcriptional activator domain YP_006429878.1 PFAM: Transglutaminase-like superfamily YP_006429879.1 TIGRFAM: LPXTG-motif cell wall anchor domain YP_006429881.1 PFAM: Domain of unknown function (DUF303) YP_006429882.1 PFAM: Metallo-beta-lactamase superfamily YP_006429883.1 PFAM: D-aminopeptidase YP_006429884.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_006429885.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_006429886.1 PFAM: Ribosomal protein L7/L12 C-terminal domain YP_006429887.1 PFAM: Methyltransferase domain YP_006429888.1 PFAM: Nucleotidyltransferase domain YP_006429889.1 PFAM: Putative tRNA binding domain; TIGRFAM: export-related chaperone CsaA YP_006429891.1 PFAM: short chain dehydrogenase YP_006429892.1 PFAM: HxlR-like helix-turn-helix YP_006429893.1 PFAM: Cupin domain YP_006429896.1 PFAM: Response regulator receiver domain YP_006429897.1 PFAM: Protein of unknown function (DUF554) YP_006429902.1 PFAM: 4Fe-4S binding domain YP_006429903.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006429904.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain YP_006429906.1 PFAM: Polysulphide reductase, NrfD YP_006429907.1 PFAM: Nitrate reductase delta subunit YP_006429908.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006429910.1 PFAM: Nitrate reductase delta subunit YP_006429911.1 PFAM: Polysulphide reductase, NrfD YP_006429912.1 PFAM: Polysulphide reductase, NrfD YP_006429913.1 PFAM: FMN-binding domain YP_006429914.1 PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_006429915.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme YP_006429916.1 PFAM: Xylose isomerase-like TIM barrel; manually curated YP_006429917.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006429918.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_006429920.1 PFAM: Bacterial transcription activator, effector binding domain YP_006429921.1 PFAM: Bacterial regulatory proteins, tetR family YP_006429922.1 PFAM: NADPH-dependent FMN reductase YP_006429923.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_006429926.1 PFAM: NAD dependent epimerase/dehydratase family YP_006429927.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_006429928.1 PFAM: Glycosyl transferases group 1; TIGRFAM: spore coat protein, CotS family YP_006429929.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_006429930.1 PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_006429933.1 PFAM: LysM domain YP_006429936.1 PFAM: HSP20-like domain of unknown function (DUF1813) YP_006429937.1 PFAM: EamA-like transporter family YP_006429940.1 PFAM: ABC transporter YP_006429942.1 PFAM: Transcriptional regulator PadR-like family YP_006429944.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429946.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_006429947.1 PFAM: DNA alkylation repair enzyme YP_006429948.1 PFAM: Domain of unknown function (DUF1848) YP_006429949.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006429950.1 PFAM: Acyltransferase family YP_006429951.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429952.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429954.1 PFAM: Radical SAM superfamily; B12 binding domain YP_006429955.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold YP_006429956.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006429957.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase N terminal; 4-hydroxyphenylacetate 3-hydroxylase C terminal YP_006429958.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; manually curated; non-canonical start codon YP_006429959.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006429960.1 PFAM: AMP-binding enzyme YP_006429961.1 PFAM: Domain of unknown function (DUF362) YP_006429962.1 PFAM: Protein of unknown function (DUF901); Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain YP_006429963.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_006429964.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006429966.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006429967.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006429969.1 PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family YP_006429970.1 PFAM: LysM domain YP_006429971.1 PFAM: SCP-2 sterol transfer family YP_006429972.1 PFAM: MarR family YP_006429973.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006429974.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006429975.1 PFAM: Uncharacterised ArCR, COG2043 YP_006429976.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_006429977.1 PFAM: Cytochrome c YP_006429978.1 PFAM: Branched-chain amino acid transport system / permease component YP_006429979.1 PFAM: Branched-chain amino acid transport system / permease component YP_006429980.1 PFAM: ABC transporter YP_006429981.1 PFAM: Basic membrane protein YP_006429982.1 PFAM: Ferritin-like domain YP_006429983.1 PFAM: SNARE associated Golgi protein YP_006429984.1 TIGRFAM: hemerythrin-like metal-binding domain YP_006429985.1 PFAM: CheC-like family YP_006429986.1 PFAM: HD domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006429987.1 PFAM: ADP-ribosylglycohydrolase YP_006429988.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_006429989.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family YP_006429990.1 PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier YP_006429991.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006429993.1 PFAM: LysM domain YP_006429995.1 PFAM: Bacterial regulatory proteins, gntR family YP_006429996.1 PFAM: ABC transporter YP_006429998.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_006429999.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease); manually curated YP_006430000.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_006430001.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_006430002.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_006430003.1 PFAM: AhpC/TSA family YP_006430004.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_006430005.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006430006.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006430007.1 PFAM: Protein of unknown function (DUF2680) YP_006430008.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_006430009.1 PFAM: EAL domain; ABC transporter substrate binding protein; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006430011.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_006430012.1 PFAM: EamA-like transporter family YP_006430013.1 PFAM: Rubrerythrin YP_006430014.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006430015.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006430016.1 PFAM: ABC transporter YP_006430017.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006430018.1 PFAM: Domain of unknown function DUF YP_006430019.1 PFAM: Response regulator receiver domain YP_006430020.1 PFAM: Domain of Unknown function (DUF542); Hemerythrin HHE cation binding domain; TIGRFAM: iron-sulfur cluster repair di-iron protein YP_006430021.1 PFAM: Heavy-metal-associated domain YP_006430023.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_006430024.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_006430025.1 PFAM: NADPH-dependent FMN reductase YP_006430026.1 PFAM: Rubrerythrin YP_006430029.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_006430030.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006430031.1 PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_006430032.1 PFAM: Aminotransferase class I and II YP_006430033.1 PFAM: Putative cell wall binding repeat 2 YP_006430034.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006430035.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_006430037.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006430038.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006430040.1 PFAM: Polysulphide reductase, NrfD YP_006430041.1 PFAM: Nitrate reductase delta subunit YP_006430044.1 PFAM: Domain of unknown function (DUF1905) YP_006430045.1 PFAM: Bacterial transcription activator, effector binding domain YP_006430046.1 PFAM: Putative cell wall binding repeat 2; N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_006430048.1 PFAM: Penicillinase repressor YP_006430049.1 PFAM: BlaR1 peptidase M56 YP_006430051.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_006430052.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_006430054.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence YP_006430055.1 PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006430056.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006430057.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006430058.1 PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006430059.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence YP_006430061.1 PFAM: Nitrate reductase delta subunit YP_006430062.1 PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006430063.1 PFAM: FMN-binding domain YP_006430064.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006430065.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006430066.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006430067.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases YP_006430069.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006430070.1 PFAM: 4Fe-4S binding domain YP_006430071.1 PFAM: Protein of unknown function (DUF2922) YP_006430072.1 PFAM: Protein of unknown function (DUF1659) YP_006430073.1 PFAM: Protein of unknown function (DUF3102) YP_006430074.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: DMSO reductase family type II enzyme chaperone YP_006430075.1 PFAM: 4Fe-4S binding domain YP_006430076.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006430077.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006430078.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_006430079.1 PFAM: Hydantoinase B/oxoprolinase YP_006430080.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_006430081.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_006430082.1 PFAM: Uncharacterized conserved protein (DUF2156) YP_006430083.1 PFAM: Acetyltransferase (GNAT) family YP_006430084.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_006430085.1 PFAM: Methyltransferase domain YP_006430086.1 PFAM: Aminotransferase class-V YP_006430087.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_006430088.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_006430089.1 PFAM: Thermophilic metalloprotease (M29) YP_006430090.1 PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family YP_006430091.1 PFAM: Poly A polymerase head domain YP_006430092.1 PFAM: Flavin reductase like domain YP_006430093.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_006430094.1 PFAM: Protein of unknown function (DUF1232) YP_006430096.1 PFAM: Protein of unknown function (DUF421) YP_006430097.1 PFAM: Ribosomal RNA adenine dimethylase YP_006430098.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006430099.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006430100.1 PFAM: Aminotransferase class I and II YP_006430101.1 PFAM: AsnC family YP_006430102.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_006430103.1 PFAM: Glycosyl transferase family 4 YP_006430106.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_006430107.1 PFAM: DRTGG domain; CBS domain; Bacterial regulatory proteins, gntR family YP_006430108.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_006430109.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_006430111.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_006430112.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_006430117.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006430119.1 PFAM: BRCA1 C Terminus (BRCT) domain YP_006430120.1 PFAM: Sulfite exporter TauE/SafE YP_006430121.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006430122.1 PFAM: Acetyltransferase (GNAT) family YP_006430123.1 PFAM: Amino acid permease YP_006430124.1 PFAM: Beta-eliminating lyase; TIGRFAM: tyrosine phenol-lyase; tryptophanase, leader peptide-associated YP_006430125.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_006430126.1 PFAM: HD domain YP_006430127.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006430131.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006430132.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_006430133.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_006430134.1 PFAM: ABC transporter YP_006430135.1 PFAM: Domain of unknown function DUF; TIGRFAM: putative sporulation protein YtaF YP_006430136.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_006430137.1 PFAM: Transglycosylase SLT domain YP_006430138.1 PFAM: Transcriptional regulator PadR-like family YP_006430139.1 PFAM: Protein of unknown function (DUF2812) YP_006430140.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006430141.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases YP_006430142.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase YP_006430143.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase) YP_006430144.1 PFAM: AMP-binding enzyme; TIGRFAM: O-succinylbenzoate-CoA ligase YP_006430145.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: o-succinylbenzoate synthase YP_006430146.1 PFAM: Rhodanese-like domain YP_006430150.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_006430151.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain YP_006430152.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase YP_006430153.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_006430154.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_006430155.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_006430156.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_006430157.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein YP_006430158.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_006430159.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_006430164.1 PFAM: Helix-turn-helix YP_006430165.1 PFAM: Bacterial ABC transporter protein EcsB YP_006430166.1 PFAM: ABC transporter YP_006430167.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; Bacterial SNF2 helicase associated; SWIM zinc finger YP_006430168.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_006430169.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_006430170.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_006430172.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006430173.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006430174.1 PFAM: Molybdopterin oxidoreductase; Response regulator receiver domain; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006430175.1 PFAM: 4Fe-4S binding domain YP_006430176.1 PFAM: Polysulphide reductase, NrfD YP_006430177.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006430178.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006430179.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Response regulator receiver domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006430181.1 PFAM: Polysulphide reductase, NrfD YP_006430182.1 PFAM: Nitrate reductase delta subunit YP_006430186.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_006430187.1 PFAM: Ferritin-like domain; LysM domain; TIGRFAM: spore coat assembly protein SafA YP_006430188.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_006430189.1 PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase YP_006430190.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_006430191.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_006430193.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006430194.1 PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase YP_006430195.1 PFAM: Protein of unknown function (DUF456) YP_006430196.1 PFAM: DnaJ domain; DnaJ C terminal region YP_006430198.1 PFAM: Glycosyl transferase family 2 YP_006430199.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006430200.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006430201.1 PFAM: ABC transporter YP_006430204.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein YP_006430206.1 PFAM: CYTH domain YP_006430207.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_006430208.1 PFAM: Flavin reductase like domain YP_006430210.1 PFAM: Uncharacterized protein family UPF0027 YP_006430211.1 PFAM: Bacterial regulatory proteins, gntR family YP_006430212.1 PFAM: ABC transporter YP_006430215.1 PFAM: ABC transporter YP_006430217.1 PFAM: Thioredoxin YP_006430218.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_006430220.1 PFAM: Nitrate reductase delta subunit YP_006430221.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases YP_006430222.1 PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006430223.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006430224.1 PFAM: 4Fe-4S binding domain YP_006430225.1 PFAM: B12 binding domain YP_006430226.1 PFAM: Pterin binding enzyme YP_006430227.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_006430228.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006430229.1 PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_006430230.1 PFAM: Protein of unknown function (DUF1638) YP_006430231.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_006430232.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain YP_006430233.1 PFAM: Predicted metal-binding protein (DUF2284) YP_006430234.1 PFAM: short chain dehydrogenase YP_006430235.1 PFAM: Nitroreductase family YP_006430236.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit YP_006430237.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006430238.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006430239.1 PFAM: Bacterial extracellular solute-binding protein YP_006430241.1 PFAM: 5TMR of 5TMR-LYT; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006430242.1 PFAM: Domain of unknown function (DUF307) YP_006430244.1 PFAM: Aldo/keto reductase family YP_006430245.1 PFAM: Domain of unknown function (DUF1287) YP_006430246.1 PFAM: Nitroreductase family YP_006430248.1 PFAM: Amino acid permease YP_006430250.1 PFAM: NlpC/P60 family; G5 domain; LysM domain YP_006430251.1 PFAM: Nuclease-related domain YP_006430252.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme YP_006430253.1 PFAM: EamA-like transporter family YP_006430254.1 PFAM: CoA binding domain YP_006430255.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM YP_006430256.1 PFAM: Cobalt transport protein component CbiN; TIGRFAM: cobalt transport protein YP_006430257.1 PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ YP_006430258.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit YP_006430260.1 PFAM: N-6 DNA Methylase YP_006430264.1 PFAM: MgtC family YP_006430265.1 PFAM: Arylsulfotransferase (ASST) YP_006430266.1 PFAM: Protein of unknown function (DUF2695) YP_006430267.1 PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase YP_006430268.1 PFAM: short chain dehydrogenase YP_006430269.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006430270.1 PFAM: Transcriptional regulator YP_006430271.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006430272.1 PFAM: MarR family YP_006430273.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_006430274.1 PFAM: Protein of unknown function DUF88 YP_006430275.1 PFAM: Phosphomethylpyrimidine kinase YP_006430276.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Propionate catabolism activator; PAS fold; TIGRFAM: PAS domain S-box YP_006430278.1 PFAM: domain; Transketolase, C-terminal domain YP_006430279.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_006430280.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase YP_006430281.1 PFAM: Dicarboxylate carrier protein MatC N-terminus YP_006430282.1 PFAM: Aconitase family (aconitate hydratase) YP_006430283.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_006430284.1 PFAM: Cysteine-rich domain YP_006430287.1 PFAM: Radical SAM superfamily YP_006430288.1 PFAM: Bacterial regulatory proteins, tetR family YP_006430289.1 PFAM: ABC transporter YP_006430290.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006430291.1 PFAM: NMT1/THI5 like YP_006430292.1 PFAM: Carbonic anhydrase YP_006430294.1 PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB YP_006430296.1 PFAM: Domain of unknown function (DUF1858) YP_006430297.1 PFAM: Family of unknown function (DUF438); Hemerythrin HHE cation binding domain YP_006430298.1 PFAM: ZIP Zinc transporter YP_006430299.1 PFAM: Protein of unknown function (DUF421) YP_006430301.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_006430303.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; Bacterial SH3 domain; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_006430305.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_006430306.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_006430308.1 PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family YP_006430309.1 PFAM: Radical SAM superfamily YP_006430310.1 PFAM: NlpC/P60 family; Putative peptidoglycan binding domain YP_006430311.1 PFAM: Helix-turn-helix YP_006430312.1 PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain YP_006430313.1 PFAM: Major Facilitator Superfamily YP_006430314.1 PFAM: Acetyltransferase (GNAT) family YP_006430316.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_006430318.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_006430319.1 PFAM: Peptidase family M23 YP_006430320.1 PFAM: LysM domain YP_006430321.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_006430323.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_006430324.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_006430325.1 PFAM: Aluminium resistance protein YP_006430326.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX YP_006430327.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K YP_006430328.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_006430329.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_006430330.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_006430331.1 PFAM: Protein of unknown function (DUF548) YP_006430332.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_006430333.1 PFAM: Histone deacetylase domain YP_006430334.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_006430335.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_006430336.1 PFAM: Protein of unknown function (DUF964) YP_006430337.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_006430338.1 PFAM: Domain of Unknown Function (DUF1540) YP_006430339.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease YP_006430340.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit YP_006430341.1 PFAM: Nickel-dependent hydrogenase YP_006430342.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence YP_006430343.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_006430344.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_006430348.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase YP_006430349.1 PFAM: Peptidase family M23; G5 domain; LysM domain YP_006430350.1 PFAM: Bacterial protein of unknown function (DUF896) YP_006430352.1 PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_006430353.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_006430356.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_006430357.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006430358.1 PFAM: VWA domain containing CoxE-like protein YP_006430359.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_006430360.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_006430361.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain YP_006430362.1 PFAM: EamA-like transporter family YP_006430363.1 PFAM: AraC-like ligand binding domain YP_006430364.1 PFAM: M42 glutamyl aminopeptidase YP_006430365.1 PFAM: M42 glutamyl aminopeptidase YP_006430366.1 PFAM: M42 glutamyl aminopeptidase YP_006430367.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: dipeptidase, putative YP_006430368.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain YP_006430369.1 PFAM: Rhomboid family YP_006430372.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_006430373.1 PFAM: Electron transfer flavoprotein domain YP_006430374.1 PFAM: Uncharacterised protein family (UPF0182) YP_006430376.1 PFAM: Predicted periplasmic protein (DUF2233) YP_006430377.1 PFAM: OsmC-like protein YP_006430378.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_006430382.1 PFAM: IstB-like ATP binding protein YP_006430383.1 PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain YP_006430384.1 PFAM: HD domain YP_006430385.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_006430386.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006430387.1 PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006430389.1 PFAM: Pterin binding enzyme YP_006430390.1 PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit YP_006430391.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006430392.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_006430393.1 PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit YP_006430394.1 PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit YP_006430395.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_006430396.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006430398.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_006430399.1 PFAM: Acetyltransferase (GNAT) family YP_006430400.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_006430401.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_006430402.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006430403.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_006430404.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor YP_006430407.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_006430410.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_006430411.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_006430412.1 PFAM: NADPH-dependent FMN reductase YP_006430414.1 PFAM: Acetyltransferase (GNAT) family YP_006430415.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006430419.1 PFAM: LysM domain YP_006430420.1 PFAM: ABC transporter substrate binding protein YP_006430421.1 PFAM: Branched-chain amino acid transport system / permease component YP_006430422.1 PFAM: ABC transporter YP_006430423.1 PFAM: UvrD/REP helicase; TIGRFAM: helicase-exonuclease AddAB, AddA subunit, Firmicutes type YP_006430424.1 PFAM: UvrD/REP helicase; TIGRFAM: helicase-exonuclease AddAB, AddB subunit YP_006430427.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_006430429.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006430430.1 PFAM: Phospholipase D Active site motif YP_006430431.1 PFAM: Chromate transporter YP_006430432.1 PFAM: Chromate transporter YP_006430433.1 PFAM: Coat F domain YP_006430434.1 PFAM: PspC domain YP_006430438.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006430439.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006430441.1 PFAM: Carboxymuconolactone decarboxylase family YP_006430442.1 PFAM: Protein of unknown function (DUF1294) YP_006430443.1 PFAM: Bacterial protein of unknown function (DUF939); manually curated; non-canonical start codon YP_006430444.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_006430445.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006430446.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006430447.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: butyryl-CoA:acetate CoA-transferase YP_006430448.1 PFAM: GPR1/FUN34/yaaH family YP_006430449.1 PFAM: Cysteine-rich domain; Nitrate reductase gamma subunit YP_006430450.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_006430451.1 PFAM: Electron transfer flavoprotein domain YP_006430452.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006430453.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006430454.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006430455.1 PFAM: CBS domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_006430456.1 PFAM: Protein of unknown function (DUF2922) YP_006430460.1 PFAM: BlaR1 peptidase M56 YP_006430461.1 PFAM: Penicillinase repressor YP_006430463.1 PFAM: Protein of unknown function(DUF2089) YP_006430465.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006430468.1 PFAM: Cupin domain YP_006430469.1 PFAM: Transposase, Mutator family YP_006430471.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200) YP_006430472.1 PFAM: Aldo/keto reductase family YP_006430473.1 PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase YP_006430474.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: D-serine ammonia-lyase YP_006430476.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_006430478.1 PFAM: SigmaW regulon antibacterial YP_006430479.1 PFAM: NfeD-like YP_006430480.1 PFAM: Domain of unknown function (DUF1836) YP_006430481.1 PFAM: Thermophilic metalloprotease (M29) YP_006430482.1 PFAM: S1 RNA binding domain; manually curated; non-canonical start codon YP_006430483.1 PFAM: Protein of unknown function (DUF401); TIGRFAM: converved hypothetical integral membrane protein YP_006430484.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_006430485.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_006430486.1 PFAM: TrkA-N domain; TrkA-C domain YP_006430488.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_006430489.1 PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein YP_006430490.1 PFAM: Cysteine-rich domain YP_006430491.1 PFAM: AIR carboxylase YP_006430492.1 PFAM: ABC transporter YP_006430493.1 PFAM: FecCD transport family YP_006430494.1 PFAM: FecCD transport family YP_006430495.1 PFAM: Periplasmic binding protein YP_006430497.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006430498.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006430500.1 PFAM: ABC transporter YP_006430502.1 PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI YP_006430503.1 PFAM: Radical SAM superfamily YP_006430504.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_006430505.1 PFAM: Major Facilitator Superfamily YP_006430506.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_006430507.1 PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_006430508.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006430510.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_006430511.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_006430512.1 PFAM: Putative peptidoglycan binding domain; LysM domain YP_006430513.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_006430514.1 PFAM: Protein of unknown function (DUF454) YP_006430515.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family YP_006430517.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006430518.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006430519.1 PFAM: NADPH-dependent FMN reductase YP_006430520.1 PFAM: Amidohydrolase family YP_006430521.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_006430522.1 PFAM: Peptidase family M3; TIGRFAM: oligoendopeptidase, M3 family YP_006430523.1 PFAM: RNase H; Caulimovirus viroplasmin YP_006430525.1 PFAM: Peptidase family M50 YP_006430526.1 PFAM: DEAD_2 YP_006430527.1 PFAM: Aminotransferase class I and II YP_006430528.1 PFAM: Toprim domain YP_006430529.1 PFAM: Exonuclease YP_006430530.1 PFAM: Peptidase family M48 YP_006430531.1 PFAM: Protein of unknown function, DUF606 YP_006430532.1 PFAM: Domain of Unknown Function (DUF1540) YP_006430533.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_006430534.1 PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); manually curated YP_006430535.1 PFAM: Putative phospholipid-binding domain YP_006430536.1 PFAM: PHP domain YP_006430537.1 PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family YP_006430538.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family YP_006430539.1 PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase YP_006430540.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase YP_006430541.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_006430542.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: diaminopropionate ammonia-lyase family; diaminopropionate ammonia-lyase YP_006430543.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006430544.1 manually curated YP_006430548.1 PFAM: Spo0E like sporulation regulatory protein YP_006430558.1 PFAM: HNH endonuclease YP_006430559.1 PFAM: Host cell surface-exposed lipoprotein YP_006430565.1 PFAM: Phage integrase family YP_006430567.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_006430568.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_006430569.1 PFAM: Amidohydrolase family; TIGRFAM: isoaspartyl dipeptidase IadA YP_006430570.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B YP_006430572.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_006430573.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'-nucleotidase; exopolyphosphatase YP_006430575.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_006430576.1 PFAM: Integrase core domain YP_006430577.1 PFAM: ChAPs (Chs5p-Arf1p-binding proteins); Tetratricopeptide repeat YP_006430578.1 PFAM: Ferric uptake regulator family YP_006430579.1 PFAM: Uncharacterised protein family (UPF0180) YP_006430580.1 PFAM: Peptidase family M28 YP_006430581.1 manually curated YP_006430582.1 PFAM: Phosphoglycerate mutase family YP_006430583.1 PFAM: IclR helix-turn-helix domain YP_006430584.1 TIGRFAM: putative membrane protein, TIGR04086 family YP_006430585.1 PFAM: FmdE, Molybdenum formylmethanofuran dehydrogenase operon YP_006430587.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_006430588.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase YP_006430589.1 PFAM: domain; Bacterial dnaA protein YP_006430590.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_006430591.1 PFAM: Periplasmic solute binding protein family YP_006430592.1 PFAM: ABC transporter YP_006430593.1 PFAM: ABC 3 transport family YP_006430594.1 PFAM: Ferric uptake regulator family YP_006430595.1 PFAM: SNARE associated Golgi protein YP_006430596.1 PFAM: SpoVR like protein YP_006430597.1 PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH YP_006430598.1 PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain YP_006430600.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_006430602.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2225); Tetratricopeptide repeat YP_006430604.1 PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB YP_006430606.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_006430607.1 PFAM: Thymidylate kinase YP_006430608.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006430609.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_006430610.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_006430611.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006430612.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006430614.1 PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A YP_006430615.1 PFAM: Acetyltransferase (GNAT) family YP_006430616.1 PFAM: 4Fe-4S binding domain YP_006430617.1 PFAM: Domain of unknown function (DUF1858); Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: hybrid cluster protein-associated redox disulfide domain YP_006430620.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_006430621.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DnaQ family exonuclease/DinG family helicase, putative YP_006430624.1 PFAM: Antibiotic biosynthesis monooxygenase YP_006430626.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein YP_006430628.1 TIGRFAM: phosphoesterase, MJ0936 family YP_006430629.1 PFAM: Bacterial protein of unknown function (DUF894) YP_006430631.1 PFAM: Protein of unknown function, DUF606 YP_006430633.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_006430635.1 PFAM: NlpC/P60 family YP_006430637.1 PFAM: HD domain YP_006430638.1 PFAM: Acetyltransferase (GNAT) family YP_006430639.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006430640.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_006430641.1 PFAM: ParA/MinD ATPase like; Anion-transporting ATPase YP_006430642.1 PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F YP_006430643.1 PFAM: Prephenate dehydratase; ACT domain YP_006430644.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2179) YP_006430645.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_006430646.1 PFAM: Phosphoribulokinase / Uridine kinase family YP_006430647.1 PFAM: GIY-YIG catalytic domain; manually curated YP_006430648.1 PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family YP_006430649.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_006430650.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_006430651.1 PFAM: Sulfite exporter TauE/SafE YP_006430652.1 PFAM: Putative peptidoglycan binding domain; VanW like protein YP_006430653.1 PFAM: PRC-barrel domain YP_006430654.1 manually curated YP_006430657.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family YP_006430658.1 PFAM: Thioesterase superfamily YP_006430659.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_006430660.1 PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; L-asparaginases, type II YP_006430661.1 PFAM: Late competence development protein ComFB YP_006430663.1 PFAM: Cyclic nucleotide-binding domain YP_006430665.1 PFAM: Helicase conserved C-terminal domain; DSHCT (NUC185) domain; DEAD/DEAH box helicase YP_006430667.1 PFAM: PspA/IM30 family YP_006430669.1 PFAM: Domain of unknown function (DUF477) YP_006430670.1 PFAM: SPFH domain / Band 7 family YP_006430671.1 PFAM: Rubredoxin YP_006430674.1 PFAM: Cysteine-rich domain; Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein YP_006430675.1 PFAM: Uncharacterised ACR, YkgG family COG1556 YP_006430677.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_006430678.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_006430679.1 PFAM: CoA binding domain; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_006430681.1 PFAM: ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_006430684.1 PFAM: Acetyltransferase (GNAT) family YP_006430686.1 PFAM: Peptidase family S58 YP_006430687.1 PFAM: Bacterial regulatory proteins, tetR family YP_006430688.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_006430690.1 PFAM: Aminotransferase class I and II YP_006430691.1 PFAM: PHP domain YP_006430692.1 PFAM: Membrane dipeptidase (Peptidase family M19) YP_006430693.1 PFAM: Stage V sporulation protein S (SpoVS) YP_006430694.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family YP_006430696.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG YP_006430697.1 PFAM: RecX family YP_006430698.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_006430699.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006430701.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_006430702.1 PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain YP_006430703.1 PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_006430705.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006430706.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_006430708.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ YP_006430709.1 PFAM: Protein of unknown function (DUF520) YP_006430711.1 PFAM: ACT domain; Protein of unknown function (DUF3388) YP_006430712.1 PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase YP_006430713.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_006430714.1 PFAM: Clp protease YP_006430716.1 PFAM: ABC transporter YP_006430717.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase YP_006430718.1 PFAM: XdhC and CoxI family YP_006430719.1 PFAM: HD domain YP_006430720.1 PFAM: AMP-binding enzyme YP_006430721.1 PFAM: Radical SAM superfamily YP_006430722.1 PFAM: Methyltransferase domain YP_006430723.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein YP_006430725.1 PFAM: Cysteine-rich domain; Flavin containing amine oxidoreductase YP_006430726.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain YP_006430727.1 PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PAS domain S-box YP_006430728.1 PFAM: SNARE associated Golgi protein YP_006430730.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006430731.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006430732.1 PFAM: 4Fe-4S binding domain YP_006430733.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: anti-anti-sigma factor; high affinity sulphate transporter 1 YP_006430734.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006430735.1 PFAM: Sulfite exporter TauE/SafE YP_006430737.1 PFAM: Cyclic nucleotide-binding domain YP_006430738.1 PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase YP_006430740.1 PFAM: Helix-turn-helix YP_006430741.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_006430742.1 PFAM: Acyl-ACP thioesterase YP_006430743.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_006430744.1 PFAM: Sigma-54 interaction domain YP_006430745.1 PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type YP_006430747.1 PFAM: Transposase, Mutator family YP_006430755.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006430756.1 PFAM: Polyprenyl synthetase YP_006430758.1 PFAM: L-lactate permease YP_006430759.1 PFAM: Phosphoglucose isomerase YP_006430760.1 PFAM: 4-alpha-glucanotransferase; Alpha amylase, catalytic domain; TIGRFAM: 4-alpha-glucanotransferase YP_006430761.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type YP_006430762.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit YP_006430763.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase YP_006430764.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases YP_006430765.1 PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase YP_006430766.1 PFAM: CarD-like/TRCF domain YP_006430767.1 PFAM: Stress responsive A/B Barrel Domain YP_006430772.1 PFAM: Protein of unknown function (DUF975) YP_006430773.1 PFAM: YCII-related domain YP_006430774.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006430775.1 PFAM: NUDIX domain YP_006430783.1 PFAM: Pentapeptide repeats (8 copies) YP_006430788.1 PFAM: Domain of unknown function (DU1801) YP_006430789.1 PFAM: Sulfatase YP_006430791.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_006430792.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_006430793.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_006430795.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC YP_006430796.1 PFAM: Uncharacterized ACR, YhhQ family COG1738 YP_006430798.1 PFAM: ABC transporter YP_006430799.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T YP_006430801.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein YP_006430802.1 TIGRFAM: uncharacterized protein TIGR03905 YP_006430803.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_006430804.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box YP_006430805.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_006430806.1 PFAM: RmuC family YP_006430807.1 PFAM: AcrB/AcrD/AcrF family YP_006430808.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006430809.1 PFAM: Bacterial regulatory proteins, tetR family YP_006430811.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_006430812.1 PFAM: ABC transporter YP_006430813.1 PFAM: ABC-2 type transporter YP_006430814.1 PFAM: Domain of Unknown Function (DUF1540) YP_006430815.1 PFAM: CAAX amino terminal protease family YP_006430816.1 PFAM: Putative RNA methylase family UPF0020; THUMP domain YP_006430817.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase YP_006430818.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_006430819.1 PFAM: Acetyltransferase (GNAT) family YP_006430820.1 PFAM: Acetyltransferase (GNAT) family YP_006430821.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase YP_006430823.1 PFAM: Periplasmic binding protein YP_006430824.1 PFAM: FecCD transport family YP_006430825.1 PFAM: ABC transporter YP_006430827.1 PFAM: NlpC/P60 family YP_006430828.1 PFAM: Protein of unknown function (DUF2628) YP_006430829.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_006430830.1 PFAM: Family of unknown function (DUF1790) YP_006430831.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_006430834.1 PFAM: Cysteine-rich domain YP_006430835.1 PFAM: Domain of unknown function (DUF3390); Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein YP_006430836.1 PFAM: Uncharacterised ACR, YkgG family COG1556 YP_006430838.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006430839.1 PFAM: Nickel-dependent hydrogenase YP_006430840.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence YP_006430842.1 PFAM: Protein of unknown function (DUF421) YP_006430843.1 PFAM: SAF domain YP_006430844.1 PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus YP_006430845.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006430846.1 PFAM: CheC-like family YP_006430847.1 PFAM: Response regulator receiver domain YP_006430848.1 PFAM: Peptidase family M48 YP_006430849.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_006430853.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_006430854.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_006430855.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_006430856.1 PFAM: Protein of unknown function (DUF815) YP_006430857.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_006430858.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_006430859.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_006430860.1 PFAM: Aminotransferase class I and II YP_006430861.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_006430862.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006430863.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_006430864.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family YP_006430865.1 PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter YP_006430866.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006430867.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_006430869.1 PFAM: ABC transporter YP_006430870.1 PFAM: SPFH domain / Band 7 family YP_006430871.1 PFAM: NfeD-like YP_006430872.1 PFAM: PspA/IM30 family YP_006430873.1 PFAM: Transposase domain (DUF772) YP_006430874.1 PFAM: Protein of unknown function (DUF3102) YP_006430875.1 PFAM: 4Fe-4S binding domain YP_006430876.1 PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit YP_006430877.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_006430878.1 PFAM: Bacterial regulatory protein, arsR family YP_006430879.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_006430880.1 PFAM: Mor transcription activator family YP_006430881.1 PFAM: Acetyltransferase (GNAT) family YP_006430882.1 PFAM: HD domain YP_006430883.1 PFAM: Spo0E like sporulation regulatory protein YP_006430884.1 PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein YP_006430885.1 PFAM: CBS domain YP_006430886.1 PFAM: short chain dehydrogenase YP_006430887.1 PFAM: Polyprenyl synthetase YP_006430888.1 PFAM: Protein of unknown function (DUF2600) YP_006430890.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_006430891.1 PFAM: Serine dehydrogenase proteinase YP_006430893.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_006430895.1 PFAM: Radical SAM superfamily; TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ2; radical SAM additional 4Fe4S-binding domain YP_006430896.1 PFAM: Delta-aminolevulinic acid dehydratase YP_006430897.1 PFAM: Radical SAM superfamily; TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ1; radical SAM additional 4Fe4S-binding domain YP_006430898.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrinogen-III synthase YP_006430899.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_006430900.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_006430901.1 PFAM: Sirohaem synthase dimerisation region; TIGRFAM: siroheme synthase, N-terminal domain YP_006430902.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_006430903.1 PFAM: ResB-like family YP_006430904.1 PFAM: Polysulphide reductase, NrfD YP_006430905.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006430906.1 PFAM: Polyprenyl synthetase; TIGRFAM: heptaprenyl diphosphate synthase component II YP_006430907.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB YP_006430908.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_006430910.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Bacillus form YP_006430911.1 PFAM: Amidohydrolase family YP_006430912.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); Tat (twin-arginine translocation) pathway signal sequence YP_006430913.1 PFAM: Nickel-dependent hydrogenase YP_006430914.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit YP_006430915.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family YP_006430919.1 PFAM: Transcriptional regulator PadR-like family YP_006430921.1 PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A YP_006430922.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_006430923.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase YP_006430924.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_006430925.1 PFAM: Protein of unknown function (DUF512); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase YP_006430927.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_006430928.1 PFAM: LytB protein; S1 RNA binding domain; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); ribosomal protein S1 YP_006430929.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_006430930.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_006430931.1 PFAM: CAAX amino terminal protease family YP_006430933.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_006430934.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_006430935.1 PFAM: Prephenate dehydrogenase YP_006430936.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_006430937.1 PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1 YP_006430938.1 PFAM: HutP YP_006430939.1 PFAM: Na+/H+ antiporter 1 YP_006430941.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_006430943.1 PFAM: 4Fe-4S binding domain YP_006430944.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006430945.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006430946.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_006430948.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_006430951.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_006430952.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_006430953.1 PFAM: Glycosyl transferase family 2 YP_006430954.1 PFAM: Nucleoside recognition YP_006430955.1 PFAM: Nucleoside recognition YP_006430956.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ YP_006430958.1 PFAM: Protein of unknown function (DUF2953) YP_006430959.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_006430960.1 PFAM: ScpA/B protein YP_006430961.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_006430962.1 PFAM: Peptidase family M50 YP_006430963.1 PFAM: DHH family; DHHA1 domain; CBS domain; Poly A polymerase head domain YP_006430965.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_006430967.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_006430969.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_006430970.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_006430971.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE YP_006430972.1 PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD YP_006430973.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC YP_006430974.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist YP_006430975.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor YP_006430976.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_006430977.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_006430979.1 PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase YP_006430980.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine/guanosine/xanthosine phosphorylase family YP_006430981.1 PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase YP_006430982.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_006430984.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; benzoyl-CoA reductase, bcr type, subunit D YP_006430985.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_006430986.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_006430987.1 PFAM: AMP-binding enzyme YP_006430988.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006430989.1 PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_006430991.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_006430992.1 PFAM: FeoA domain YP_006430993.1 PFAM: FeoA domain YP_006430994.1 PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M YP_006430995.1 PFAM: IMS family HHH motif; TIGRFAM: TIGR00375 family protein YP_006430996.1 PFAM: NUDIX domain YP_006430997.1 PFAM: Beta propeller domain YP_006430999.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006431000.1 PFAM: Sigma-70, region 4; Methyltransferase domain; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006431006.1 PFAM: Metallopeptidase family M24; SEC-C motif; TIGRFAM: methionine aminopeptidase, type I YP_006431008.1 PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A YP_006431009.1 PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B YP_006431010.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_006431011.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_006431012.1 PFAM: Putative rRNA methylase YP_006431013.1 PFAM: ATP-NAD kinase YP_006431014.1 PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein YP_006431015.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_006431017.1 PFAM: Divergent PAP2 family YP_006431018.1 PFAM: Polyprenyl synthetase YP_006431019.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_006431020.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_006431021.1 PFAM: CorA-like Mg2+ transporter protein YP_006431022.1 PFAM: Formiminotransferase-cyclodeaminase YP_006431023.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_006431025.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006431032.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthase (NADPH), homotetrameric YP_006431033.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_006431034.1 PFAM: Glycoprotease family; TIGRFAM: metallohydrolase, glycoprotease/Kae1 family YP_006431035.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_006431036.1 PFAM: Protein of unknown function (DUF322) YP_006431037.1 PFAM: Protein of unknown function (DUF322) YP_006431038.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_006431039.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_006431041.1 TIGRFAM: stage III sporulation protein AG YP_006431042.1 PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF YP_006431043.1 PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE YP_006431044.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD YP_006431045.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC YP_006431046.1 PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB YP_006431047.1 TIGRFAM: stage III sporulation protein AA YP_006431048.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_006431049.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_006431050.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_006431051.1 PFAM: LysM domain YP_006431053.1 PFAM: Fimbrial assembly protein (PilN) YP_006431054.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_006431055.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006431056.1 PFAM: Bacterial type II secretion system protein F domain YP_006431057.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain YP_006431059.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006431061.1 PFAM: Bacterial type II secretion system protein G YP_006431062.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_006431063.1 PFAM: Shikimate kinase YP_006431064.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_006431065.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006431066.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_006431067.1 PFAM: Protein of unknown function; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 YP_006431068.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor YP_006431069.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_006431070.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_006431071.1 PFAM: AsnC family YP_006431072.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase YP_006431073.1 PFAM: Acetokinase family; TIGRFAM: butyrate kinase YP_006431074.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006431075.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-K factor YP_006431077.1 PFAM: Peptidase family U32 YP_006431078.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_006431079.1 PFAM: Putative peptidoglycan binding domain; G5 domain; VanW like protein YP_006431080.1 PFAM: Protein of unknown function (DUF1292) YP_006431081.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_006431082.1 PFAM: Aldo/keto reductase family YP_006431083.1 PFAM: Bacterial protein of unknown function (DUF965) YP_006431084.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_006431085.1 PFAM: Helix-turn-helix; manually curated YP_006431087.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein YP_006431088.1 PFAM: Domain of unknown function DUF20 YP_006431091.1 PFAM: PRC-barrel domain YP_006431092.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_006431093.1 PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold protein NifU, Clostridium type YP_006431094.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS YP_006431095.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_006431096.1 PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus YP_006431097.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_006431098.1 PFAM: Uncharacterised BCR, COG1937 YP_006431099.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_006431100.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_006431104.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006431105.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006431106.1 PFAM: EAL domain; HDOD domain YP_006431107.1 PFAM: MutS domain V YP_006431109.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006431111.1 PFAM: Protein of unknown function (DUF458) YP_006431112.1 PFAM: Radical SAM superfamily; TIGRFAM: coproporphyrinogen dehydrogenase HemZ YP_006431113.1 PFAM: Metallo-beta-lactamase superfamily YP_006431114.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_006431115.1 PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_006431116.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_006431117.1 PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_006431121.1 PFAM: Polysaccharide deacetylase YP_006431122.1 PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_006431123.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_006431124.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_006431125.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_006431126.1 PFAM: HD domain YP_006431128.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_006431129.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_006431130.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_006431131.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain YP_006431132.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_006431133.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_006431134.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_006431135.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_006431136.1 PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit YP_006431137.1 PFAM: Cytochrome c552 YP_006431139.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE YP_006431140.1 PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD YP_006431141.1 PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF YP_006431142.1 PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF YP_006431143.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_006431144.1 PFAM: AMP-binding enzyme YP_006431145.1 PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain YP_006431147.1 PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_006431148.1 PFAM: ABC transporter YP_006431149.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006431151.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_006431152.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_006431153.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_006431154.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_006431155.1 PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit YP_006431156.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit YP_006431157.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_006431158.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_006431160.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_006431161.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_006431162.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_006431163.1 PFAM: Polysaccharide deacetylase YP_006431164.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_006431165.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_006431166.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_006431167.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_006431168.1 PFAM: DHHA1 domain; DHH family YP_006431169.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_006431170.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_006431171.1 PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family YP_006431172.1 PFAM: Protein of unknown function (DUF448) YP_006431173.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA YP_006431174.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_006431177.1 PFAM: Polysaccharide deacetylase YP_006431179.1 PFAM: Small Multidrug Resistance protein YP_006431180.1 PFAM: Small Multidrug Resistance protein YP_006431181.1 TIGRFAM: probable DNA metabolism protein YP_006431182.1 TIGRFAM: putative DNA modification/repair radical SAM protein YP_006431184.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_006431185.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006431186.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_006431187.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006431188.1 PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI YP_006431189.1 PFAM: Cytidylyltransferase family YP_006431190.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_006431191.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_006431192.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_006431193.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_006431194.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_006431196.1 PFAM: CodY helix-turn-helix domain; CodY GAF-like domain; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY YP_006431197.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_006431198.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_006431199.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC YP_006431200.1 PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase YP_006431201.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_006431202.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_006431203.1 PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_006431206.1 PFAM: ABC transporter; Predicted permease YP_006431207.1 PFAM: Xylose isomerase-like TIM barrel YP_006431208.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_006431209.1 PFAM: Hsp20/alpha crystallin family YP_006431210.1 PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein YP_006431211.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_006431212.1 PFAM: Uncharacterised BCR, COG1937 YP_006431213.1 PFAM: EamA-like transporter family YP_006431215.1 PFAM: UbiA prenyltransferase family YP_006431216.1 PFAM: Microtubule-associated protein Bicaudal-D YP_006431217.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_006431219.1 PFAM: Acetyltransferase (GNAT) family YP_006431222.1 PFAM: FtsK/SpoIIIE family YP_006431225.1 PFAM: Peptidase family M23 YP_006431226.1 PFAM: Bacterial Ig-like domain (group 2) YP_006431227.1 PFAM: NAD dependent epimerase/dehydratase family YP_006431228.1 PFAM: Putative papain-like cysteine peptidase (DUF1796) YP_006431229.1 PFAM: Polysaccharide biosynthesis protein YP_006431230.1 PFAM: Glycosyl transferases group 1 YP_006431235.1 PFAM: Peptidase family M23 YP_006431244.1 PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB; manually curated YP_006431245.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_006431252.1 PFAM: Bacterial Ig-like domain (group 1) YP_006431255.1 PFAM: Type II/IV secretion system protein YP_006431257.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006431258.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006431263.1 PFAM: Type IV leader peptidase family YP_006431264.1 PFAM: NACHT domain YP_006431265.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006431266.1 PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) YP_006431268.1 PFAM: Relaxase/Mobilisation nuclease domain; Sel1 repeat YP_006431269.1 PFAM: Bacterial mobilisation protein (MobC) YP_006431271.1 PFAM: CHC2 zinc finger YP_006431275.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_006431277.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_006431278.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006431280.1 PFAM: Fic/DOC family YP_006431282.1 PFAM: Resolvase, N terminal domain YP_006431300.1 PFAM: Peptidase S24-like YP_006431301.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_006431302.1 PFAM: Magnesium chelatase, subunit ChlI; Recombinase; Resolvase, N terminal domain YP_006431303.1 PFAM: Arylsulfotransferase (ASST) YP_006431304.1 PFAM: Sugar (and other) transporter YP_006431305.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006431306.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006431307.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006431308.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006431309.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein YP_006431310.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_006431311.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_006431312.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_006431313.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_006431314.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_006431315.1 TIGRFAM: NADH-quinone oxidoreductase, chain I YP_006431316.1 PFAM: NADH dehydrogenase YP_006431317.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit YP_006431318.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C YP_006431319.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_006431320.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_006431321.1 PFAM: Ribonuclease HII YP_006431322.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF YP_006431323.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_006431324.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_006431325.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2168) YP_006431326.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_006431327.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_006431329.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_006431330.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_006431331.1 PFAM: Putative helix-turn-helix protein, YlxM / p13 like YP_006431332.1 PFAM: Amidohydrolase family YP_006431333.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_006431334.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_006431335.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_006431336.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_006431337.1 PFAM: Ferrous iron transport protein B C terminus; Nucleoside recognition YP_006431338.1 PFAM: Ferrous iron transport protein B YP_006431339.1 PFAM: FeoA domain YP_006431340.1 PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_006431341.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain YP_006431342.1 PFAM: CDP-alcohol phosphatidyltransferase YP_006431343.1 PFAM: BlaR1 peptidase M56 YP_006431344.1 PFAM: Penicillinase repressor YP_006431345.1 PFAM: Protein of unknown function (DUF3102) YP_006431347.1 PFAM: 4Fe-4S binding domain YP_006431348.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_006431349.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006431351.1 PFAM: HEPN domain YP_006431352.1 PFAM: Nucleotidyltransferase domain YP_006431354.1 PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type YP_006431355.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_006431356.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_006431357.1 PFAM: 2-nitropropane dioxygenase YP_006431358.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_006431359.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_006431360.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_006431361.1 PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-[acyl-carrier-protein] reductase II YP_006431362.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_006431363.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX YP_006431364.1 PFAM: Thioesterase superfamily; DeoR-like helix-turn-helix domain YP_006431365.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_006431366.1 PFAM: Uncharacterized ACR, COG1399 YP_006431367.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_006431368.1 PFAM: Patatin-like phospholipase YP_006431369.1 PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ YP_006431371.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_006431372.1 PFAM: Germination protease; TIGRFAM: GPR endopeptidase YP_006431373.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_006431374.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG YP_006431375.1 PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit YP_006431376.1 PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit YP_006431377.1 PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV YP_006431378.1 PFAM: Protein of unknown function (DUF322) YP_006431379.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_006431380.1 PFAM: Hsp33 protein YP_006431381.1 PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase YP_006431382.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_006431383.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; manually curated YP_006431384.1 PFAM: Protein kinase domain; PASTA domain YP_006431385.1 PFAM: Penicillin binding protein transpeptidase domain YP_006431386.1 PFAM: Cell cycle protein YP_006431387.1 PFAM: Protein phosphatase 2C YP_006431388.1 PFAM: FHA domain YP_006431389.1 PFAM: Protein of unknown function (DUF2662); FHA domain YP_006431390.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_006431391.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; NOL1/NOP2/sun family putative RNA methylase YP_006431392.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_006431393.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_006431394.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_006431395.1 PFAM: Domain of unknown function (DUF74) YP_006431396.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_006431397.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_006431398.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2064) YP_006431399.1 PFAM: Glycosyl transferase family 2 YP_006431400.1 PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); TIGRFAM: radical SAM/Cys-rich domain protein YP_006431401.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein; alkylhydroperoxidase AhpD family core domain YP_006431403.1 PFAM: SNARE associated Golgi protein YP_006431404.1 PFAM: SNARE associated Golgi protein YP_006431405.1 PFAM: Rhodanese-like domain YP_006431407.1 PFAM: Vitamin B12 dependent methionine synthase, activation domain YP_006431408.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_006431409.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006431410.1 PFAM: B12 binding domain YP_006431411.1 PFAM: Protein of unknown function (DUF1638) YP_006431412.1 PFAM: Pterin binding enzyme YP_006431414.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_006431415.1 PFAM: B12 binding domain YP_006431417.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006431418.1 PFAM: Cobalt transport protein YP_006431419.1 PFAM: ABC transporter YP_006431420.1 PFAM: Protein of unknown function (DUF1393); TC 2.A.88.4.2 YP_006431423.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_006431424.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_006431425.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_006431426.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_006431427.1 PFAM: Domain of unknown function (DUF370) YP_006431428.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_006431429.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_006431431.1 PFAM: Protein of unknown function (DUF3343) YP_006431432.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein YP_006431433.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_006431434.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_006431435.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; golgi membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase YP_006431436.1 PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA) YP_006431438.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_006431439.1 PFAM: NapC/NirT cytochrome c family, N-terminal region YP_006431440.1 TIGRFAM: YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain YP_006431441.1 TIGRFAM: YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain YP_006431443.1 PFAM: Peptidase family U32 YP_006431445.1 PFAM: UvrD/REP helicase YP_006431448.1 PFAM: FAD binding domain; FMN-binding domain; TIGRFAM: flavocytochrome c YP_006431449.1 PFAM: MerR family regulatory protein YP_006431451.1 PFAM: Bacterial regulatory proteins, tetR family YP_006431452.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain YP_006431453.1 PFAM: Acetyltransferase (GNAT) family YP_006431455.1 PFAM: Domain of unknown function (DUF1835); Protein of unknown function YP_006431457.1 PFAM: Protein of unknown function DUF86 YP_006431458.1 PFAM: Nucleotidyltransferase domain YP_006431459.1 PFAM: NUDIX domain YP_006431460.1 PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6 YP_006431461.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; orotate phosphoribosyltransferase YP_006431462.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1 YP_006431463.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_006431464.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_006431465.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_006431466.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_006431467.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_006431468.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_006431469.1 PFAM: Phosphoribosyl transferase domain YP_006431470.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_006431471.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_006431472.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: sporulation protein, yteA family; RNA polymerase-binding protein DksA YP_006431474.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_006431475.1 PFAM: Xylose isomerase-like TIM barrel YP_006431476.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_006431478.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_006431479.1 PFAM: Propanediol utilisation protein PduL YP_006431482.1 PFAM: RHS Repeat; Collagen triple helix repeat (20 copies); LysM domain; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_006431483.1 PFAM: Uncharacterised protein family (UPF0236) YP_006431485.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_006431486.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2247) YP_006431487.1 PFAM: RHS Repeat; TGF-beta propeptide; LysM domain; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_006431488.1 PFAM: Glycine cleavage system P-protein YP_006431489.1 PFAM: Glycine cleavage system P-protein YP_006431490.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_006431491.1 PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein YP_006431492.1 PFAM: Putative sugar diacid recognition; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431493.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_006431495.1 PFAM: DivIVA protein; TIGRFAM: DivIVA domain YP_006431496.1 PFAM: S4 domain YP_006431497.1 PFAM: YGGT family YP_006431498.1 PFAM: Protein of unknown function (DUF552) YP_006431499.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_006431500.1 TIGRFAM: putative membrane fusion protein YP_006431501.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_006431502.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_006431503.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_006431505.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_006431506.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_006431507.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-E factor YP_006431508.1 PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA YP_006431509.1 PFAM: ABC transporter YP_006431510.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_006431511.1 PFAM: Branched-chain amino acid transport system / permease component YP_006431512.1 PFAM: Branched-chain amino acid transport system / permease component YP_006431513.1 PFAM: Receptor family ligand binding region YP_006431514.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_006431515.1 PFAM: Response regulator receiver domain YP_006431516.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold YP_006431517.1 PFAM: Protein of unknown function (DUF820); Phd_YefM; TIGRFAM: prevent-host-death family protein YP_006431519.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_006431520.1 PFAM: Protein of unknown function (DUF1290) YP_006431521.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_006431522.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006431523.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; manually curated YP_006431525.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_006431526.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW YP_006431527.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_006431528.1 PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_006431529.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_006431530.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_006431531.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D YP_006431532.1 PFAM: Septum formation initiator YP_006431533.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_006431534.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_006431535.1 PFAM: Permease family YP_006431536.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_006431537.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431538.1 PFAM: Domain of unknown function (DUF1858); TIGRFAM: hybrid cluster protein-associated redox disulfide domain YP_006431539.1 PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain YP_006431540.1 PFAM: Ferric uptake regulator family YP_006431541.1 manually curated YP_006431542.1 PFAM: VWA domain containing CoxE-like protein YP_006431543.1 PFAM: AAA domain (dynein-related subfamily) YP_006431544.1 PFAM: Protein of unknown function (DUF964) YP_006431546.1 PFAM: HD domain YP_006431547.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase, HisJ family YP_006431548.1 PFAM: Putative modulator of DNA gyrase YP_006431549.1 PFAM: Putative modulator of DNA gyrase YP_006431550.1 PFAM: Acetyltransferase (GNAT) family YP_006431551.1 PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_006431552.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_006431553.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_006431554.1 PFAM: Protein of unknown function (DUF342) YP_006431555.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_006431557.1 PFAM: Negative regulator of genetic competence (MecA) YP_006431558.1 PFAM: Domain of unknown function (DUF362) YP_006431560.1 PFAM: HD domain YP_006431561.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_006431562.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; sulfate adenylyltransferase subunit 1 YP_006431563.1 PFAM: Phosphoadenosine phosphosulfate reductase family YP_006431564.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin) YP_006431565.1 PFAM: ROK family YP_006431566.1 PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein YP_006431567.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein YP_006431568.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT YP_006431569.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein YP_006431570.1 PFAM: Transglycosylase SLT domain YP_006431571.1 PFAM: CheW-like domain YP_006431572.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_006431573.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_006431574.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins YP_006431575.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins YP_006431576.1 PFAM: Flagellar hook capping protein YP_006431577.1 PFAM: Flagellar hook-length control protein FliK YP_006431578.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family YP_006431580.1 PFAM: CheD; stimulates methylation of MCP proteins YP_006431581.1 PFAM: CheC-like family YP_006431582.1 PFAM: PilZ domain YP_006431583.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006431584.1 PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; manually curated YP_006431585.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_006431586.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; manually curated YP_006431587.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_006431588.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ YP_006431589.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_006431590.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO YP_006431591.1 PFAM: Response regulator receiver domain YP_006431592.1 PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN YP_006431593.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM YP_006431594.1 PFAM: Flagellar basal body-associated protein FliL YP_006431595.1 PFAM: Flagellar protein (FlbD) YP_006431596.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ YP_006431597.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI YP_006431598.1 PFAM: Flagellar assembly protein FliH YP_006431599.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG YP_006431600.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_006431601.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE YP_006431602.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC YP_006431603.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_006431604.1 PFAM: CheW-like domain YP_006431605.1 PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_006431606.1 PFAM: FlaG protein YP_006431608.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS YP_006431609.1 PFAM: Flagellar hook-associated protein 2 C-terminus YP_006431611.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006431612.1 TIGRFAM: methyltransferase, FkbM family YP_006431613.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_006431614.1 PFAM: NAD dependent epimerase/dehydratase family YP_006431615.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase YP_006431616.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase YP_006431618.1 PFAM: Glycosyl transferase family 2 YP_006431619.1 PFAM: Glycosyl transferase family 2 YP_006431620.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_006431621.1 PFAM: FlaG protein YP_006431622.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_006431623.1 PFAM: FliW protein YP_006431625.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3 YP_006431626.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK YP_006431627.1 PFAM: FlgN protein YP_006431628.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM YP_006431629.1 PFAM: Transposase domain (DUF772) YP_006431630.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006431631.1 PFAM: OmpA family YP_006431632.1 PFAM: Peptidase family M28 YP_006431633.1 PFAM: Protein of unknown function (DUF327) YP_006431634.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_006431637.1 PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit YP_006431638.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_006431639.1 PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein YP_006431641.1 PFAM: Protein of unknown function (DUF1694) YP_006431642.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_006431644.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_006431645.1 PFAM: Family of unknown function (DUF633) YP_006431646.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_006431647.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_006431648.1 PFAM: Sporulation and spore germination YP_006431649.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_006431650.1 PFAM: FMN-binding domain YP_006431651.1 PFAM: 4Fe-4S binding domain YP_006431652.1 PFAM: Nitrate reductase delta subunit YP_006431653.1 PFAM: Polysulphide reductase, NrfD YP_006431654.1 PFAM: 4Fe-4S binding domain YP_006431655.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006431657.1 PFAM: Bacterial regulatory proteins, tetR family YP_006431658.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431659.1 PFAM: Aminotransferase class I and II YP_006431660.1 PFAM: Polysulphide reductase, NrfD YP_006431661.1 PFAM: 4Fe-4S binding domain YP_006431662.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006431664.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_006431665.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006431666.1 PFAM: 4Fe-4S binding domain YP_006431667.1 PFAM: Cyclic nucleotide-binding domain YP_006431668.1 PFAM: Coenzyme A transferase YP_006431669.1 PFAM: Coenzyme A transferase YP_006431670.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006431671.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006431672.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006431673.1 PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_006431674.1 PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain YP_006431675.1 PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase YP_006431676.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_006431678.1 PFAM: CBS domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_006431680.1 PFAM: Cytochrome c552 YP_006431681.1 PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit YP_006431683.1 PFAM: Transcriptional regulator PadR-like family YP_006431684.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase YP_006431685.1 PFAM: Domain of unknown function (DUF299) YP_006431686.1 PFAM: HTH domain; CBS domain YP_006431687.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_006431688.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_006431689.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325) YP_006431690.1 PFAM: Protein of unknown function, DUF265 YP_006431692.1 PFAM: Domain of unknown function (DUF364) YP_006431693.1 PFAM: ABC transporter YP_006431694.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain YP_006431695.1 PFAM: FecCD transport family YP_006431696.1 PFAM: ABC transporter YP_006431697.1 PFAM: Periplasmic binding protein YP_006431698.1 PFAM: Elongation factor Tu domain 2; Elongation factor SelB, winged helix; Elongation factor Tu GTP binding domain; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU YP_006431699.1 PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase YP_006431700.1 PFAM: Protein involved in formate dehydrogenase formation YP_006431701.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit YP_006431702.1 PFAM: 4Fe-4S binding domain; Formate dehydrogenase N, transmembrane; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing YP_006431703.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; Contains selenocysteine; manually curated YP_006431705.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_006431706.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_006431707.1 PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_006431708.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_006431709.1 PFAM: Prokaryotic diacylglycerol kinase YP_006431710.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_006431711.1 PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG YP_006431712.1 PFAM: PhoH-like protein YP_006431713.1 PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD YP_006431714.1 PFAM: YabP family; TIGRFAM: sporulation protein YqfC YP_006431715.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit YP_006431716.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase YP_006431717.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006431719.1 PFAM: NADH dehydrogenase YP_006431720.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006431721.1 PFAM: GDSL-like Lipase/Acylhydrolase; manually curated YP_006431722.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain YP_006431723.1 PFAM: Yqey-like protein YP_006431724.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_006431725.1 PFAM: HIT domain YP_006431726.1 PFAM: PEGA domain YP_006431727.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family YP_006431728.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_006431729.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_006431730.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_006431731.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_006431732.1 PFAM: GrpE YP_006431733.1 PFAM: Domain of unknown function; HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_006431734.1 PFAM: Putative cell wall binding repeat 2; Cna protein B-type domain; Bacterial Ig-like domain (group 1) YP_006431735.1 PFAM: Response regulator receiver domain YP_006431736.1 PFAM: Histidine kinase; 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006431737.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_006431738.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_006431739.1 PFAM: FAD binding domain; FMN-binding domain; TIGRFAM: flavocytochrome c YP_006431740.1 PFAM: Response regulator receiver domain YP_006431741.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006431742.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_006431743.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P YP_006431744.1 PFAM: Membrane protein of unknown function YP_006431745.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_006431746.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_006431748.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter YP_006431749.1 PFAM: Formate--tetrahydrofolate ligase YP_006431750.1 PFAM: Formiminotransferase-cyclodeaminase YP_006431751.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_006431752.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_006431753.1 PFAM: SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_006431754.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006431755.1 PFAM: Predicted histidine kinase sensor domain YP_006431756.1 PFAM: B12 binding domain YP_006431757.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_006431758.1 PFAM: Protein of unknown function (DUF1638) YP_006431759.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006431760.1 PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family YP_006431761.1 PFAM: Trimethylamine methyltransferase (MTTB) YP_006431762.1 PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit; TIGRFAM: N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H YP_006431763.1 PFAM: Major Facilitator Superfamily YP_006431764.1 PFAM: Cyclic nucleotide-binding domain YP_006431765.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006431766.1 TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006431767.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain YP_006431768.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_006431769.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_006431770.1 PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism YP_006431771.1 PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YP_006431772.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_006431773.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family YP_006431774.1 PFAM: GTPase of unknown function; Domain of unknown function (DUF1967); GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain YP_006431776.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_006431777.1 PFAM: Protein of unknown function (DUF464) YP_006431778.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_006431779.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_006431780.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein YP_006431781.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein YP_006431782.1 PFAM: Peptidase family M50 YP_006431783.1 PFAM: Peptidase family M23 YP_006431784.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; cell division protein FtsW YP_006431785.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE YP_006431786.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD YP_006431787.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC YP_006431788.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_006431789.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_006431790.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_006431791.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_006431792.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_006431793.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_006431795.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase; fumarate hydratase, class II YP_006431796.1 PFAM: CoA binding domain; Putative DNA-binding protein N-terminus YP_006431798.1 PFAM: Phosphate transporter family YP_006431799.1 PFAM: Protein of unknown function DUF47 YP_006431800.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_006431801.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_006431802.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431803.1 PFAM: Conserved region in glutamate synthase YP_006431805.1 PFAM: Rubrerythrin; LysM domain YP_006431806.1 PFAM: Sodium/calcium exchanger protein YP_006431807.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain YP_006431808.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_006431809.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease YP_006431810.1 PFAM: Indole-3-glycerol phosphate synthase YP_006431811.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_006431812.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_006431813.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_006431814.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_006431815.1 PFAM: chorismate binding enzyme YP_006431816.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_006431817.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_006431818.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_006431819.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase YP_006431821.1 PFAM: Cupin domain YP_006431822.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_006431823.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_006431824.1 PFAM: Cysteine-rich domain YP_006431826.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_006431827.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_006431828.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_006431830.1 PFAM: O-methyltransferase YP_006431831.1 PFAM: HD domain YP_006431832.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431833.1 manually curated YP_006431834.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006431835.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_006431836.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit YP_006431837.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region YP_006431838.1 PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_006431839.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_006431840.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_006431841.1 PFAM: Methylaspartate ammonia-lyase C-terminus; Methylaspartate ammonia-lyase N-terminus; TIGRFAM: methylaspartate ammonia-lyase YP_006431842.1 PFAM: Methylaspartate mutase E chain (MutE); TIGRFAM: methylaspartate mutase, E subunit YP_006431843.1 TIGRFAM: conserved hypothetical protein YP_006431844.1 PFAM: B12 binding domain; TIGRFAM: methylaspartate mutase, S subunit; methylmalonyl-CoA mutase C-terminal domain YP_006431845.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_006431846.1 PFAM: HD domain YP_006431847.1 PFAM: MarR family YP_006431848.1 PFAM: Sporulation and spore germination YP_006431849.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_006431850.1 PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R YP_006431851.1 PFAM: ZIP Zinc transporter YP_006431852.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_006431853.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006431854.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431855.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_006431856.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_006431857.1 PFAM: Tripartite tricarboxylate transporter TctB family YP_006431858.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_006431859.1 PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus YP_006431860.1 PFAM: SAF domain YP_006431861.1 PFAM: Protein of unknown function (DUF964) YP_006431865.1 PFAM: Cell Wall Hydrolase; LysM domain YP_006431866.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_006431867.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_006431868.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase YP_006431869.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase YP_006431870.1 PFAM: Spo0E like sporulation regulatory protein; manually curated YP_006431871.1 PFAM: 4Fe-4S binding domain YP_006431872.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431873.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_006431874.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006431875.1 PFAM: Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box YP_006431876.1 PFAM: Protein of unknown function (DUF1049) YP_006431877.1 PFAM: Peptidase family M23 YP_006431878.1 PFAM: Protein of unknown function, DUF583 YP_006431879.1 PFAM: Putative peptidoglycan binding domain; G5 domain; VanW like protein YP_006431880.1 PFAM: Helix-turn-helix YP_006431882.1 PFAM: Aminotransferase class IV YP_006431883.1 PFAM: Glutamine amidotransferase class-I; Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; aminodeoxychorismate synthase, component I, bacterial clade YP_006431885.1 PFAM: Transposase domain (DUF772); manually curated YP_006431887.1 PFAM: VanZ like family YP_006431888.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_006431890.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_006431891.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_006431892.1 PFAM: Glycosyl transferases group 1 YP_006431893.1 PFAM: RmlD substrate binding domain YP_006431894.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_006431895.1 PFAM: Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein C-terminal YP_006431896.1 PFAM: Methyltransferase domain YP_006431897.1 PFAM: Methyltransferase domain YP_006431898.1 PFAM: Radical SAM superfamily YP_006431899.1 PFAM: Glycosyl transferases group 1 YP_006431902.1 PFAM: ABC transporter YP_006431903.1 PFAM: ABC-2 type transporter YP_006431904.1 PFAM: Glycosyl transferases group 1 YP_006431905.1 PFAM: Bacterial sugar transferase; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_006431906.1 PFAM: Bacterial Ig-like domain (group 2); Putative cell wall binding repeat 2 YP_006431909.1 PFAM: Putative cell wall binding repeat 2; Fibronectin type III domain YP_006431910.1 PFAM: Putative cell wall binding repeat 2; O-Antigen ligase; Bacterial Ig-like domain (group 4) YP_006431911.1 PFAM: Putative cell wall binding repeat 2 YP_006431912.1 PFAM: Putative cell wall binding repeat 2; N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_006431913.1 PFAM: Putative cell wall binding repeat 2; Glycosyl hydrolases family 18 YP_006431914.1 PFAM: Ribbon-helix-helix protein, copG family YP_006431915.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_006431917.1 PFAM: Glycosyl transferases group 1 YP_006431918.1 PFAM: Glycosyl transferases group 1 YP_006431919.1 PFAM: Polysaccharide biosynthesis protein YP_006431920.1 PFAM: O-Antigen ligase YP_006431921.1 PFAM: Glycosyl transferases group 1 YP_006431922.1 PFAM: Bacterial sugar transferase YP_006431923.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006431924.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_006431925.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_006431926.1 PFAM: Polysaccharide biosynthesis protein YP_006431927.1 PFAM: Transglycosylase SLT domain; Putative cell wall binding repeat 2 YP_006431930.1 PFAM: Protein of unknown function (DUF1648) YP_006431934.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_006431935.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_006431936.1 PFAM: Putative sugar diacid recognition; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431937.1 PFAM: Cysteine-rich domain YP_006431938.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_006431939.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006431940.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_006431941.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006431942.1 PFAM: Bacterial regulatory proteins, tetR family YP_006431943.1 PFAM: Protein of unknown function (DUF445) YP_006431944.1 PFAM: Protein of unknown function (DUF445) YP_006431945.1 PFAM: Metallo-beta-lactamase superfamily YP_006431947.1 PFAM: Cysteine-rich domain; Nitrate reductase gamma subunit YP_006431948.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: butyryl-CoA:acetate CoA-transferase YP_006431949.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006431950.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006431951.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006431952.1 PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region YP_006431953.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_006431954.1 PFAM: Electron transfer flavoprotein domain YP_006431955.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_006431956.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006431957.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase YP_006431958.1 PFAM: Response regulator receiver domain YP_006431959.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box YP_006431960.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_006431961.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006431962.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006431963.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006431964.1 PFAM: ABC transporter YP_006431965.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006431966.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006431967.1 PFAM: ABC transporter YP_006431968.1 PFAM: Branched-chain amino acid transport system / permease component YP_006431969.1 PFAM: ABC transporter substrate binding protein YP_006431970.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006431971.1 PFAM: NMT1/THI5 like YP_006431972.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006431973.1 PFAM: ABC transporter YP_006431974.1 PFAM: ABC transporter YP_006431975.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein YP_006431976.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_006431977.1 TIGRFAM: DNA binding domain, excisionase family YP_006431978.1 PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase YP_006431979.1 PFAM: HD domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006431980.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric YP_006431981.1 PFAM: Rubrerythrin YP_006431982.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006431983.1 PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006431984.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases YP_006431985.1 PFAM: Nitrate reductase delta subunit YP_006431987.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006431989.1 PFAM: Protein of unknown function (DUF1847) YP_006431990.1 PFAM: Protein of unknown function (DUF1015) YP_006431991.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006431992.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_006431993.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_006431994.1 PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase YP_006431995.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006431996.1 PFAM: ABC transporter YP_006431997.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006431998.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006431999.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_006432000.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006432001.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_006432002.1 PFAM: SirA-like protein; TIGRFAM: selenium metabolism protein YedF YP_006432003.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein YP_006432005.1 PFAM: Predicted metal-binding protein (DUF2284) YP_006432006.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_006432007.1 PFAM: B12 binding domain YP_006432008.1 PFAM: Pterin binding enzyme YP_006432009.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006432010.1 PFAM: Universal stress protein family YP_006432011.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_006432012.1 PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA YP_006432013.1 manually curated YP_006432014.1 PFAM: Polysulphide reductase, NrfD YP_006432015.1 PFAM: 4Fe-4S binding domain YP_006432016.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Iron hydrogenase small subunit; TIGRFAM: [FeFe] hydrogenase, group A YP_006432017.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_006432018.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_006432019.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_006432020.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006432021.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006432024.1 PFAM: Citrate transporter YP_006432025.1 PFAM: Domain of unknown function (DUF336) YP_006432026.1 PFAM: DctM-like transporters; Tripartite ATP-independent periplasmic transporters, DctQ component; TIGRFAM: TRAP transporter, DctM subunit YP_006432027.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_006432028.1 PFAM: Protein of unknown function (DUF1185) YP_006432029.1 PFAM: Amidohydrolase family YP_006432030.1 PFAM: Major Facilitator Superfamily YP_006432031.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: sulfoacetaldehyde acetyltransferase YP_006432032.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006432033.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; Propionate catabolism activator YP_006432034.1 PFAM: Major Facilitator Superfamily YP_006432036.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain YP_006432037.1 PFAM: Protein of unknown function (DUF2935) YP_006432041.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006432042.1 PFAM: Transposase, Mutator family YP_006432045.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006432048.1 PFAM: TnsA endonuclease N terminal; Mu transposase, C-terminal; TnsA endonuclease C terminal; Integrase core domain YP_006432050.1 PFAM: N-6 DNA Methylase YP_006432055.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_006432057.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_006432058.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006432059.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006432060.1 PFAM: Bacterial regulatory proteins, tetR family YP_006432061.1 PFAM: ABC transporter YP_006432062.1 PFAM: Predicted permease YP_006432063.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006432064.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_006432067.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325) YP_006432068.1 PFAM: Nitrate reductase delta subunit YP_006432069.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006432070.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365) YP_006432071.1 PFAM: DMSO reductase anchor subunit (DmsC) YP_006432072.1 PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit YP_006432073.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence YP_006432074.1 PFAM: Toxic anion resistance protein (TelA) YP_006432076.1 PFAM: 5-bromo-4-chloroindolyl phosphate hydrolysis protein YP_006432077.1 PFAM: von Willebrand factor type A domain YP_006432078.1 PFAM: Metallo-beta-lactamase superfamily YP_006432079.1 PFAM: Protein of unknown function (DUF3102) YP_006432080.1 PFAM: Protein of unknown function (DUF1659) YP_006432081.1 PFAM: Protein of unknown function (DUF2922) YP_006432082.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_006432083.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase YP_006432084.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_006432085.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_006432086.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_006432087.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_006432088.1 PFAM: Phosphoglycerate kinase YP_006432089.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_006432090.1 PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein YP_006432091.1 PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related YP_006432092.1 PFAM: P-loop ATPase protein family YP_006432094.1 PFAM: Radical SAM superfamily; B12 binding domain YP_006432095.1 PFAM: Putative peptidoglycan binding domain; Glycosyl hydrolases family 18; LysM domain YP_006432096.1 PFAM: Polysaccharide deacetylase YP_006432097.1 PFAM: Bacterial Ig-like domain (group 2); Putative cell wall binding repeat 2 YP_006432098.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_006432099.1 PFAM: Bacterial regulatory proteins, gntR family YP_006432102.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_006432103.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_006432106.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_006432107.1 PFAM: Peptidase family M23 YP_006432108.1 PFAM: Predicted permease YP_006432109.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein YP_006432111.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_006432112.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_006432113.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_006432114.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_006432115.1 PFAM: 'Cold-shock' DNA-binding domain YP_006432116.1 PFAM: ABC transporter YP_006432117.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006432118.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006432120.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_006432121.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_006432122.1 PFAM: Protein of unknown function (DUF2680) YP_006432124.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_006432125.1 PFAM: Glycosyl transferases group 1 YP_006432127.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family YP_006432128.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_006432129.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_006432130.1 PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID YP_006432132.1 PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_006432134.1 PFAM: Peptidase family M23 YP_006432135.1 PFAM: Universal stress protein family YP_006432136.1 PFAM: HPP family YP_006432137.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006432138.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006432139.1 PFAM: ABC transporter substrate binding protein YP_006432140.1 PFAM: Polysulphide reductase, NrfD YP_006432141.1 PFAM: 4Fe-4S binding domain YP_006432142.1 PFAM: Nitrate reductase delta subunit YP_006432143.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain YP_006432144.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_006432145.1 PFAM: Stage II sporulation protein; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain YP_006432146.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family YP_006432149.1 TIGRFAM: reductive dehalogenase YP_006432150.1 TIGRFAM: reductive dehalogenase YP_006432151.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006432152.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006432153.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006432156.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_006432157.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit YP_006432158.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_006432159.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_006432160.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_006432161.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_006432162.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_006432163.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); manually curated YP_006432165.1 PFAM: Putative F0F1-ATPase subunit (ATPase_gene1) YP_006432166.1 PFAM: Domain of unknown function (DUF955) YP_006432170.1 PFAM: Phage tail sheath protein YP_006432171.1 PFAM: Protein of unknown function (DUF2001) YP_006432172.1 PFAM: Phage XkdN-like protein YP_006432173.1 TIGRFAM: tape measure domain YP_006432174.1 PFAM: LysM domain YP_006432176.1 PFAM: Protein of unknown function (DUF2577) YP_006432177.1 PFAM: Protein of unknown function (DUF2634) YP_006432178.1 PFAM: Baseplate J-like protein YP_006432179.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2313) YP_006432184.1 PFAM: Protein of unknown function (DUF1113) YP_006432185.1 PFAM: Radical SAM superfamily YP_006432188.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_006432190.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_006432191.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_006432192.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_006432193.1 PFAM: Serine hydroxymethyltransferase YP_006432194.1 PFAM: Protein of unknown function (DUF436); TIGRFAM: TIGR01440 family protein YP_006432195.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_006432196.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_006432197.1 PFAM: Domain of unknown function DUF YP_006432198.1 PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_006432199.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_006432200.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_006432201.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_006432202.1 PFAM: Peptidase family M23 YP_006432203.1 PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II YP_006432204.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family YP_006432205.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist YP_006432207.1 PFAM: Response regulator receiver domain YP_006432208.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_006432209.1 PFAM: FemAB family YP_006432210.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_006432211.1 PFAM: DNA-directed RNA polymerase delta subunit YP_006432212.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_006432213.1 PFAM: Domain of unknown function (DUF1934) YP_006432215.1 TIGRFAM: germination protein YpeB YP_006432216.1 PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme YP_006432217.1 PFAM: Aminotransferase class-V YP_006432219.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase YP_006432220.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_006432223.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_006432225.1 PFAM: Sulfite exporter TauE/SafE YP_006432226.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_006432227.1 TIGRFAM: TIGR00300 family protein YP_006432229.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutamyl-tRNA synthetase, archaeal and eukaryotic family YP_006432230.1 PFAM: Transcription elongation factor, GreA/GreB, C-term YP_006432231.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_006432232.1 TIGRFAM: lactoylglutathione lyase YP_006432234.1 PFAM: 2',5' RNA ligase family YP_006432235.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006432236.1 PFAM: Thioredoxin YP_006432237.1 PFAM: BMC domain YP_006432238.1 PFAM: Propanediol utilisation protein PduL YP_006432239.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: acetaldehyde dehydrogenase (acetylating) YP_006432240.1 PFAM: BMC domain YP_006432241.1 PFAM: Ethanolamine utilisation protein EutQ YP_006432242.1 PFAM: BMC domain YP_006432243.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_006432244.1 PFAM: Ethanolamine utilisation protein EutN/carboxysome YP_006432245.1 PFAM: BMC domain YP_006432246.1 PFAM: Competence protein A; TIGRFAM: ethanolamine utilization protein EutJ family protein YP_006432248.1 PFAM: Ethanolamine utilisation - propanediol utilisation; TIGRFAM: ethanolamine utilization protein, EutP YP_006432249.1 PFAM: BMC domain YP_006432250.1 PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family YP_006432251.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase YP_006432252.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: acetaldehyde dehydrogenase (acetylating) YP_006432253.1 PFAM: BMC domain YP_006432254.1 PFAM: BMC domain YP_006432255.1 PFAM: Sugar (and other) transporter YP_006432256.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_006432258.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006432259.1 PFAM: EamA-like transporter family YP_006432261.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006432262.1 PFAM: F420-0:Gamma-glutamyl ligase YP_006432263.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_006432264.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_006432265.1 PFAM: Metallo-beta-lactamase superfamily YP_006432266.1 PFAM: Tetratricopeptide repeat YP_006432267.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006432268.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; SCIFF radical SAM maturase YP_006432269.1 TIGRFAM: six-cysteine peptide SCIFF YP_006432271.1 PFAM: ABC transporter YP_006432272.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_006432273.1 PFAM: Branched-chain amino acid transport system / permease component YP_006432274.1 PFAM: Branched-chain amino acid transport system / permease component YP_006432275.1 PFAM: Receptor family ligand binding region YP_006432276.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_006432277.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase YP_006432278.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_006432279.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease, Lon family YP_006432280.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_006432281.1 PFAM: Predicted membrane protein (DUF2232) YP_006432283.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_006432284.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_006432285.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_006432286.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_006432287.1 PFAM: Bacterial protein of unknown function (DUF951) YP_006432288.1 PFAM: Colicin V production protein YP_006432289.1 PFAM: CBS domain YP_006432290.1 PFAM: Tetratricopeptide repeat YP_006432291.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB YP_006432292.1 PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA YP_006432294.1 PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC YP_006432296.1 PFAM: Protein of unknown function (DUF554) YP_006432297.1 PFAM: Helix-turn-helix; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_006432298.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006432299.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_006432300.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_006432301.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain YP_006432302.1 PFAM: R3H domain YP_006432303.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain YP_006432304.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_006432305.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; IMG reference gene:2507425124_SP