-- dump date   	20140619_060805
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004485400.1	TIGRFAM: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; KEGG: dac:Daci_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core
YP_004485401.1	SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: dac:Daci_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain
YP_004485402.1	TIGRFAM: DNA gyrase, subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; KEGG: dac:Daci_0003 DNA gyrase subunit B; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like
YP_004485403.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0004 LysR family transcriptional regulator
YP_004485404.1	KEGG: dac:Daci_0005 hypothetical protein; HAMAP: UPF0271 protein ybgL; PFAM: LamB/YcsF
YP_004485405.1	PFAM: Biotin/lipoyl attachment; KEGG: dac:Daci_0006 hypothetical protein
YP_004485406.1	KEGG: dac:Daci_0007 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal
YP_004485407.1	KEGG: dac:Daci_0008 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1
YP_004485408.1	SMART: Allophanate hydrolase subunit 2; TIGRFAM: Allophanate hydrolase subunit 2; KEGG: dac:Daci_0009 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2
YP_004485409.1	manually curated; KEGG: dac:Daci_0010 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004485410.1	KEGG: dac:Daci_0011 LysR family transcriptional regulator; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004485411.1	KEGG: dac:Daci_0012 hypothetical protein
YP_004485412.1	PFAM: MaoC-like dehydratase; KEGG: dac:Daci_0013 dehydratase
YP_004485413.1	PFAM: Uncharacterised protein family UPF0153; KEGG: dac:Daci_0014 hypothetical protein
YP_004485414.1	KEGG: dac:Daci_0015 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004485415.1	KEGG: dac:Daci_0016 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004485416.1	PFAM: Outer membrane efflux protein; KEGG: dac:Daci_0017 outer membrane efflux protein
YP_004485417.1	KEGG: dac:Daci_0018 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004485418.1	TIGRFAM: Secretion protein HlyD; KEGG: dac:Daci_0019 RND family efflux transporter MFP subunit
YP_004485419.1	KEGG: dac:Daci_0021 ATP-dependent DNA helicase DinG; manually curated; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal
YP_004485421.1	PFAM: Lipid A 3-O-deacylase-related; KEGG: dac:Daci_0022 hypothetical protein
YP_004485422.1	PFAM: Protein of unknown function DUF1520; KEGG: dac:Daci_0023 hypothetical protein
YP_004485423.1	PFAM: Putative exonuclease, RdgC; KEGG: dac:Daci_0024 recombination associated protein
YP_004485424.1	KEGG: dac:Daci_0025 beta-ketothiolase; TIGRFAM: Thiolase
YP_004485425.1	KEGG: dac:Daci_0026 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core
YP_004485426.1	KEGG: dac:Daci_0027 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004485427.1	KEGG: dac:Daci_0028 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004485428.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0029 extracellular ligand-binding receptor
YP_004485429.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0030 inner-membrane translocator
YP_004485430.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0031 inner-membrane translocator
YP_004485431.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0032 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485432.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_0033 TetR family transcriptional regulator
YP_004485433.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: dac:Daci_0034 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004485434.1	PFAM: Heavy metal transport/detoxification protein; KEGG: dac:Daci_0035 heavy metal transport/detoxification protein
YP_004485435.1	KEGG: dac:Daci_0036 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004485436.1	KEGG: dac:Daci_0037 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004485437.1	PFAM: NADPH-dependent FMN reductase; KEGG: dac:Daci_0038 NADPH-dependent FMN reductase
YP_004485438.1	KEGG: dac:Daci_0039 hypothetical protein
YP_004485439.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0040 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004485440.1	PFAM: NIPSNAP; KEGG: dac:Daci_0041 NIPSNAP family protein
YP_004485441.1	KEGG: dac:Daci_0042 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004485442.1	KEGG: dac:Daci_0043 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004485443.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: dac:Daci_0044 glutathione S-transferase domain-containing protein
YP_004485444.1	PFAM: NADPH-dependent FMN reductase; KEGG: dac:Daci_0045 NADPH-dependent FMN reductase
YP_004485445.1	TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: dac:Daci_0046 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related
YP_004485446.1	TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: dac:Daci_0047 16S rRNA methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G
YP_004485447.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_0048 lysine exporter protein LysE/YggA
YP_004485448.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dac:Daci_0049 cobyrinic acid ac-diamide synthase
YP_004485449.1	PFAM: Protein of unknown function DUF1234; KEGG: dac:Daci_0050 hypothetical protein
YP_004485450.1	TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: dac:Daci_0051 ParB-like partition protein; SMART: ParB-like nuclease
YP_004485451.1	PFAM: Peptidoglycan binding-like; KEGG: dac:Daci_0052 peptidoglycan-binding domain-containing protein
YP_004485452.1	KEGG: dac:Daci_0053 type 12 methyltransferase
YP_004485453.1	KEGG: dac:Daci_0054 class I cytochrome c
YP_004485454.1	KEGG: dac:Daci_0055 oxidoreductase molybdopterin-binding; PFAM: Oxidoreductase, molybdopterin binding; Moybdenum cofactor oxidoreductase, dimerisation
YP_004485455.1	KEGG: dac:Daci_0056 hypothetical protein
YP_004485456.1	KEGG: dac:Daci_0057 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004485457.1	SMART: Helix-turn-helix, AraC domain; KEGG: dac:Daci_0058 AraC family transcriptional regulator
YP_004485458.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0059 major facilitator transporter
YP_004485459.1	KEGG: dac:Daci_0060 glutamate carboxypeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004485460.1	KEGG: dac:Daci_0061 hypothetical protein
YP_004485461.1	KEGG: dac:Daci_0062 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004485462.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0063 LysR family transcriptional regulator
YP_004485463.1	KEGG: dac:Daci_0064 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004485464.1	KEGG: dac:Daci_0065 signal transduction protein
YP_004485465.1	TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; KEGG: dac:Daci_0066 ATP--cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type
YP_004485466.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0067 LysR family transcriptional regulator
YP_004485467.1	KEGG: dac:Daci_0069 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004485468.1	KEGG: dac:Daci_0070 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004485469.1	KEGG: dac:Daci_0071 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004485470.1	TIGRFAM: Benzoyl-CoA oxygenase/reductase, BoxA protein; KEGG: dac:Daci_0072 benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Oxidoreductase FAD-binding region
YP_004485471.1	TIGRFAM: Benzoyl-CoA oxygenase, B subunit; KEGG: dac:Daci_0073 benzoyl-CoA oxygenase component B
YP_004485472.1	KEGG: dac:Daci_0074 benzoyl-CoA-dihydrodiol lyase; TIGRFAM: Benzoyl-CoA-dihydrodiol lyase; PFAM: Crotonase, core
YP_004485473.1	SMART: Helix-turn-helix type 3; HAMAP: Shikimate kinase; KEGG: dac:Daci_0075 anaerobic benzoate catabolism transcriptional regulator; PFAM: Shikimate kinase; Helix-turn-helix type 3
YP_004485474.1	TIGRFAM: Benzoate-CoA ligase family; KEGG: dac:Daci_0076 benzoate-CoA ligase family; PFAM: AMP-dependent synthetase/ligase
YP_004485475.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0077 extracellular ligand-binding receptor
YP_004485476.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0078 inner-membrane translocator
YP_004485477.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0079 inner-membrane translocator
YP_004485478.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0080 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485479.1	KEGG: dac:Daci_0081 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004485480.1	KEGG: dac:Daci_0084 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004485481.1	TIGRFAM: Succinate CoA transferase; KEGG: dac:Daci_0085 succinate CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase
YP_004485482.1	KEGG: dac:Daci_0086 uracil-xanthine permease; TIGRFAM: Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004485483.1	TIGRFAM: Acetoacetyl-CoA synthase; KEGG: dac:Daci_0087 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004485484.1	KEGG: dac:Daci_0088 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004485485.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: dac:Daci_0089 acyl-CoA dehydrogenase domain-containing protein
YP_004485486.1	PFAM: Crotonase, core; KEGG: dac:Daci_0090 enoyl-CoA hydratase
YP_004485487.1	TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: dac:Daci_0091 septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, C-terminal
YP_004485488.1	KEGG: dac:Daci_0092 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004485489.1	KEGG: dac:Daci_0093 cell division topological specificity factor MinE; TIGRFAM: Septum formation topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE
YP_004485490.1	KEGG: aav:Aave_3778 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like
YP_004485491.1	KEGG: aav:Aave_3779 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004485492.1	PFAM: Peptidase M4, propeptide, PepSY; KEGG: aav:Aave_3780 peptidase
YP_004485493.1	KEGG: dia:Dtpsy_3452 hypothetical protein
YP_004485494.1	PFAM: Amino acid permease-associated region; KEGG: pfs:PFLU0368 putative histidine ABC transporter permease
YP_004485495.1	KEGG: dac:Daci_0096 flavin reductase domain-containing protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding
YP_004485496.1	SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dac:Daci_0097 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_004485497.1	TIGRFAM: Homoprotocatechuate degradation transcriptional regulator HpaR; PFAM: HTH transcriptional regulator, MarR; KEGG: dac:Daci_0098 MarR family transcriptional regulator; SMART: HTH transcriptional regulator, MarR
YP_004485498.1	TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: dac:Daci_0099 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase
YP_004485499.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: dac:Daci_0100 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004485500.1	TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: dac:Daci_0101 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004485501.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dac:Daci_0102 5-carboxymethyl-2-hydroxymuconate isomerase
YP_004485502.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: dac:Daci_0103 extradiol ring-cleavage dioxygenase class III protein subunit B
YP_004485503.1	PFAM: Extradiol ring-cleavage dioxygenase LigAB, LigA subunit; KEGG: dac:Daci_0104 extradiol ring-cleavage dioxygenase LigAB LigA subunit
YP_004485504.1	KEGG: dac:Daci_0105 hypothetical protein
YP_004485505.1	TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; KEGG: dac:Daci_0106 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004485506.1	TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit; KEGG: dac:Daci_0107 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004485507.1	TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; KEGG: dac:Daci_0108 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004485508.1	KEGG: dac:Daci_0109 fibronectin type III domain-containing protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III
YP_004485509.1	PFAM: UspA; KEGG: dac:Daci_0110 UspA domain-containing protein
YP_004485510.1	PFAM: Metallophosphoesterase; KEGG: dac:Daci_0111 metallophosphoesterase
YP_004485511.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0112 LysR family transcriptional regulator
YP_004485512.1	KEGG: dac:Daci_0113 hypothetical protein
YP_004485513.1	HAMAP: Phosphoenolpyruvate carboxykinase, GTP-utilising; KEGG: dac:Daci_0114 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising
YP_004485514.1	KEGG: dac:Daci_0115 hypothetical protein
YP_004485515.1	KEGG: dac:Daci_0116 threonine dehydratase; TIGRFAM: Threonine dehydratase II; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT
YP_004485516.1	KEGG: dac:Daci_0117 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004485517.1	PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: dac:Daci_0118 FAD-binding 9 siderophore-interacting domain-containing protein
YP_004485518.1	KEGG: dac:Daci_0119 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004485519.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; KEGG: dac:Daci_0120 acyl-CoA dehydrogenase domain-containing protein
YP_004485520.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_0121 TetR family transcriptional regulator
YP_004485521.1	KEGG: dac:Daci_0122 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004485522.1	KEGG: dac:Daci_0123 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004485523.1	PFAM: Fimbrial protein, C-terminal; KEGG: dac:Daci_0124 fimbrial protein
YP_004485524.1	KEGG: dac:Daci_0125 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004485525.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dac:Daci_0126 hypothetical protein
YP_004485526.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0127 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485527.1	PFAM: Secretion protein HlyD; KEGG: dac:Daci_0128 secretion protein HlyD family protein
YP_004485528.1	KEGG: dac:Daci_0129 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; TIGRFAM: Pyridoxal phosphate phosphatase-related; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Pyridoxal phosphate phosphatase-related
YP_004485529.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_0130 alpha/beta hydrolase fold protein
YP_004485530.1	KEGG: dac:Daci_0131 hypothetical protein
YP_004485531.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_0132 hypothetical protein
YP_004485532.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dac:Daci_0133 DegT/DnrJ/EryC1/StrS aminotransferase
YP_004485533.1	KEGG: dac:Daci_0134 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004485534.1	KEGG: dac:Daci_0135 hypothetical protein
YP_004485535.1	KEGG: dac:Daci_0136 hypothetical protein
YP_004485536.1	KEGG: dac:Daci_0137 aminotransferase class-III; PFAM: Aminotransferase class-III
YP_004485537.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_0138 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
YP_004485538.1	KEGG: dac:Daci_0139 hypothetical protein
YP_004485539.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dac:Daci_0140 hypothetical protein
YP_004485540.1	TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; DNA helicase, ATP-dependent, RecQ type, bacterial; PFAM: RQC domain; DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: dac:Daci_0141 ATP-dependent DNA helicase RecQ; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal
YP_004485541.1	KEGG: dac:Daci_0142 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004485542.1	KEGG: dac:Daci_0143 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004485543.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0144 LysR family transcriptional regulator
YP_004485544.1	KEGG: dac:Daci_0145 glycine betaine ABC transporter substrate-binding protein
YP_004485545.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_0146 binding-protein-dependent transport systems inner membrane component
YP_004485546.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0147 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485547.1	SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; manually curated; KEGG: dac:Daci_0148 histidine utilization repressor; TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR
YP_004485548.1	PFAM: Phenylalanine/histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; HAMAP: Histidine ammonia-lyase; KEGG: dac:Daci_0149 histidine ammonia-lyase
YP_004485549.1	TIGRFAM: Urocanase; KEGG: dac:Daci_0150 urocanate hydratase; PFAM: Urocanase
YP_004485550.1	PFAM: HutD; KEGG: dac:Daci_0151 hypothetical protein
YP_004485551.1	PFAM: Amidohydrolase 3; TIGRFAM: Imidazolonepropionase; HAMAP: Imidazolonepropionase; KEGG: dac:Daci_0152 imidazolonepropionase
YP_004485552.1	KEGG: dac:Daci_0153 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004485553.1	PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: dac:Daci_0154 histidinol-phosphate aminotransferase
YP_004485554.1	KEGG: dac:Daci_0155 N-formimino-L-glutamate deiminase; TIGRFAM: Formiminoglutamate deiminase; PFAM: Amidohydrolase 1
YP_004485555.1	KEGG: dac:Daci_0156 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate deformylase; PFAM: N-formylglutamate amidohydrolase
YP_004485556.1	TIGRFAM: Redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: dac:Daci_0157 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004485557.1	KEGG: dac:Daci_0158 hypothetical protein
YP_004485558.1	KEGG: dac:Daci_0159 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004485559.1	KEGG: dac:Daci_0160 RNA-directed DNA polymerase; PFAM: RNA-directed DNA polymerase (reverse transcriptase)
YP_004485560.1	KEGG: dac:Daci_0161 zinc finger SWIM domain-containing protein
YP_004485561.1	KEGG: dac:Daci_0162 hypothetical protein
YP_004485562.1	KEGG: dac:Daci_0163 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004485563.1	KEGG: dac:Daci_0164 hydrophobe/amphiphile efflux-1 family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004485564.1	KEGG: dac:Daci_0165 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004485565.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_0166 FAD dependent oxidoreductase
YP_004485566.1	KEGG: dac:Daci_0167 hypothetical protein
YP_004485567.1	KEGG: dac:Daci_0168 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004485568.1	KEGG: dac:Daci_0169 homocysteine S-methyltransferase; PFAM: Homocysteine S-methyltransferase
YP_004485569.1	KEGG: dac:Daci_0170 putative Fe-S oxidoreductase
YP_004485570.1	KEGG: dac:Daci_0171 porin
YP_004485571.1	KEGG: dac:Daci_0172 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004485572.1	KEGG: dac:Daci_0173 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004485573.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0174 LysR family transcriptional regulator
YP_004485574.1	KEGG: dac:Daci_0175 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004485575.1	KEGG: dac:Daci_0176 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004485576.1	KEGG: dac:Daci_0177 thiolase
YP_004485577.1	PFAM: Protein of unknown function DUF35; KEGG: dac:Daci_0178 hypothetical protein
YP_004485578.1	KEGG: dac:Daci_0179 formamidase; PFAM: Acetamidase/Formamidase
YP_004485579.1	KEGG: dac:Daci_0180 FmdB family regulatory protein; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative
YP_004485580.1	KEGG: dac:Daci_0181 hypothetical protein
YP_004485581.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0182 extracellular ligand-binding receptor
YP_004485582.1	PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: dac:Daci_0183 alcohol dehydrogenase
YP_004485583.1	PFAM: Amidase; KEGG: dac:Daci_0184 amidase
YP_004485585.1	KEGG: dac:Daci_0185 hypothetical protein
YP_004485586.1	KEGG: dac:Daci_0186 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004485587.1	KEGG: dac:Daci_0187 hypothetical protein
YP_004485588.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0188 LysR family transcriptional regulator
YP_004485589.1	KEGG: dac:Daci_0189 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004485590.1	KEGG: dac:Daci_0190 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004485591.1	KEGG: dac:Daci_0191 hypothetical protein
YP_004485592.1	KEGG: dac:Daci_0192 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004485593.1	KEGG: dac:Daci_0193 acetyl-CoA hydrolase/transferase
YP_004485594.1	PFAM: Crotonase, core; KEGG: dac:Daci_0194 enoyl-CoA hydratase/isomerase
YP_004485595.1	KEGG: dac:Daci_0195 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase; PFAM: MaoC-like dehydratase
YP_004485596.1	KEGG: dac:Daci_0196 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004485597.1	KEGG: dac:Daci_0197 hypothetical protein
YP_004485598.1	KEGG: dac:Daci_0198 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004485599.1	KEGG: dac:Daci_0199 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004485600.1	PFAM: MmgE/PrpD; KEGG: dac:Daci_0200 MmgE/PrpD family protein
YP_004485601.1	KEGG: dac:Daci_0201 hypothetical protein
YP_004485602.1	PFAM: HpcH/HpaI aldolase; KEGG: dac:Daci_0202 HpcH/HpaI aldolase
YP_004485603.1	KEGG: dac:Daci_0203 hypothetical protein
YP_004485604.1	KEGG: dac:Daci_0204 hypothetical protein
YP_004485605.1	KEGG: dac:Daci_0207 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004485606.1	KEGG: dac:Daci_0208 hypothetical protein
YP_004485607.1	KEGG: dac:Daci_0209 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004485608.1	KEGG: dac:Daci_0210 hypothetical protein
YP_004485609.1	KEGG: dac:Daci_0211 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region
YP_004485610.1	KEGG: dac:Daci_0212 hypothetical protein
YP_004485611.1	KEGG: dac:Daci_0213 hypothetical protein; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; PFAM: Polyphosphate kinase 2
YP_004485612.1	KEGG: dac:Daci_0214 hypothetical protein
YP_004485613.1	PFAM: Peptidase M30, hyicolysin; KEGG: dac:Daci_0215 putative hemagglutinin-related transmembrane protein
YP_004485614.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0216 LysR family transcriptional regulator
YP_004485615.1	PFAM: Transmembrane pair, bacterial; KEGG: dac:Daci_0217 transmembrane pair domain-containing protein
YP_004485616.1	KEGG: dac:Daci_0218 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004485617.1	KEGG: dac:Daci_0219 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004485618.1	TIGRFAM: ABC transporter, urea, substrate-binding, UrtA; Twin-arginine translocation pathway, signal sequence; KEGG: dac:Daci_0220 UreA ABC transporter UreA-binding protein
YP_004485619.1	KEGG: dac:Daci_0221 UreA ABC transporter permease UrtB; TIGRFAM: ABC transporter, urea, permease protein, UrtB; PFAM: Bacterial inner-membrane translocator
YP_004485620.1	KEGG: dac:Daci_0222 UreA ABC transporter permease UrtC; TIGRFAM: ABC transporter, urea, permease protein, UrtC; PFAM: Bacterial inner-membrane translocator
YP_004485621.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; KEGG: dac:Daci_0223 UreA ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter-like
YP_004485622.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: dac:Daci_0224 UreA ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter-like
YP_004485623.1	KEGG: dac:Daci_0225 formamidase; PFAM: Acetamidase/Formamidase
YP_004485624.1	TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: dac:Daci_0226 FmdB family regulatory protein; SMART: Regulatory protein, FmdB, putative
YP_004485625.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0227 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485626.1	KEGG: dac:Daci_0228 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004485627.1	KEGG: dac:Daci_0229 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004485628.1	KEGG: dac:Daci_0230 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor
YP_004485629.1	KEGG: dac:Daci_0231 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; HTH transcriptional regulator, Crp
YP_004485630.1	TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: dac:Daci_0232 methionine synthase; PFAM: Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region
YP_004485631.1	PFAM: Protein of unknown function DUF2195; KEGG: dac:Daci_0233 hypothetical protein
YP_004485632.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: dac:Daci_0235 glycerophosphoryl diester phosphodiesterase
YP_004485633.1	KEGG: dac:Daci_0236 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004485634.1	PFAM: Sodium:dicarboxylate symporter; KEGG: dac:Daci_0237 C4-dicarboxylate transporter DctA
YP_004485635.1	PFAM: General substrate transporter; KEGG: dac:Daci_0238 major facilitator transporter
YP_004485636.1	KEGG: dac:Daci_0239 acetylornithine deacetylase; TIGRFAM: Acetylornithine deacetylase (ArgE); PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004485637.1	PFAM: Putative cyclase; KEGG: ctt:CtCNB1_0249 putative cyclase
YP_004485638.1	PFAM: DSBA oxidoreductase; KEGG: ctt:CtCNB1_0248 DsbA oxidoreductase
YP_004485639.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_0247 transcriptional regulator, LysR family
YP_004485640.1	KEGG: dac:Daci_0240 alkylphosphonate utilization operon protein PhnA; TIGRFAM: PhnA protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal
YP_004485641.1	KEGG: dac:Daci_0241 hypothetical protein
YP_004485642.1	KEGG: dac:Daci_0242 pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_004485643.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0243 LysR family transcriptional regulator
YP_004485644.1	PFAM: LrgA; KEGG: dac:Daci_0244 LrgA family protein
YP_004485645.1	PFAM: LrgB-like protein; KEGG: dac:Daci_0245 LrgB family protein
YP_004485646.1	KEGG: dac:Daci_0246 hypothetical protein
YP_004485647.1	PFAM: Aldehyde dehydrogenase; KEGG: dac:Daci_0247 aldehyde dehydrogenase
YP_004485648.1	KEGG: dac:Daci_0248 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal
YP_004485649.1	KEGG: dac:Daci_0249 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004485650.1	KEGG: dac:Daci_0250 hypothetical protein
YP_004485651.1	TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; KEGG: dac:Daci_0251 5-dehydro-4-deoxyglucarate dehydratase; PFAM: Dihydrodipicolinate synthetase
YP_004485652.1	KEGG: dac:Daci_0252 hypothetical protein
YP_004485653.1	KEGG: dac:Daci_0253 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004485654.1	KEGG: dac:Daci_0254 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal
YP_004485655.1	KEGG: dac:Daci_0255 hypothetical protein
YP_004485656.1	TIGRFAM: Galactarate dehydratase; KEGG: dac:Daci_0256 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain
YP_004485657.1	PFAM: Ribonuclease BN-related; KEGG: dac:Daci_0258 ribonuclease BN
YP_004485658.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0259 LysR family transcriptional regulator
YP_004485659.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0260 inner-membrane translocator
YP_004485660.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0261 inner-membrane translocator
YP_004485661.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0262 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485662.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0263 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485663.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0264 extracellular ligand-binding receptor
YP_004485664.1	PFAM: Plasmid maintenance system killer; KEGG: alv:Alvin_1033 plasmid maintenance system killer
YP_004485665.1	TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: sen:SACE_0851 plasmid maintenance system antidote protein; SMART: Helix-turn-helix type 3
YP_004485666.1	KEGG: dac:Daci_0266 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004485667.1	KEGG: dac:Daci_0267 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004485668.1	KEGG: dac:Daci_0268 oxidoreductase FAD-binding subunit; PFAM: Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_004485669.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0269 LysR family transcriptional regulator
YP_004485670.1	KEGG: dac:Daci_0270 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004485671.1	KEGG: dac:Daci_0271 hypothetical protein
YP_004485672.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_0272 PepSY-associated TM helix domain-containing protein
YP_004485673.1	KEGG: dac:Daci_0273 hypothetical protein
YP_004485674.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0274 LysR family transcriptional regulator
YP_004485675.1	manually curated; KEGG: dac:Daci_0275 hypothetical protein
YP_004485676.1	KEGG: dac:Daci_0276 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004485677.1	KEGG: dac:Daci_0277 hypothetical protein
YP_004485678.1	TIGRFAM: Cystathionine beta-lyase, bacterial; KEGG: dac:Daci_0278 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004485679.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: dac:Daci_0279 2-nitropropane dioxygenase NPD
YP_004485680.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0280 major facilitator transporter
YP_004485681.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0281 LysR family transcriptional regulator
YP_004485682.1	TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: dac:Daci_0284 Mg chelatase subunit ChlI; SMART: ATPase, AAA+ type, core
YP_004485683.1	KEGG: vei:Veis_2953 YD repeat-containing protein; TIGRFAM: YD repeat; PFAM: YD repeat
YP_004485685.1	KEGG: vei:Veis_2952 hypothetical protein; TIGRFAM: RHS repeat-associated core domain; PFAM: RHS protein
YP_004485687.1	manually curated
YP_004485688.1	KEGG: dac:Daci_0285 hypothetical protein
YP_004485689.1	KEGG: dac:Daci_0286 hypothetical protein
YP_004485690.1	KEGG: dac:Daci_0287 hydroxymethylglutaryl-CoA reductase, degradative; TIGRFAM: Hydroxymethylglutaryl-CoA reductase, class II/archaeal class I
YP_004485691.1	KEGG: dac:Daci_0288 transcriptional regulator; PFAM: Aminotransferase, class I/II; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004485692.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0289 LysR family transcriptional regulator
YP_004485693.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0290 major facilitator transporter
YP_004485694.1	HAMAP: L-rhamnonate dehydratase; KEGG: dac:Daci_0291 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal
YP_004485695.1	KEGG: dac:Daci_0292 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase
YP_004485696.1	KEGG: dac:Daci_0293 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004485697.1	KEGG: dac:Daci_0294 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004485698.1	KEGG: dac:Daci_0295 hypothetical protein
YP_004485699.1	KEGG: dac:Daci_0296 sulfatase; PFAM: Sulfatase
YP_004485700.1	KEGG: dac:Daci_0297 hypothetical protein
YP_004485701.1	KEGG: dac:Daci_4482 YD repeat-containing protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: RHS protein; YD repeat
YP_004485702.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Rhs element Vgr protein
YP_004485703.1	KEGG: dac:Daci_0301 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_004485704.1	PFAM: Nitrogen regulatory protein PII; KEGG: dac:Daci_0302 nitrogen regulatory protein P-II
YP_004485705.1	KEGG: dac:Daci_0303 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter
YP_004485706.1	PFAM: Protein of unknown function DUF2137; KEGG: pfs:PFLU2449 hypothetical protein
YP_004485707.1	KEGG: vei:Veis_2429 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004485708.1	PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: dac:Daci_0304 FAD linked oxidase domain-containing protein
YP_004485709.1	PFAM: Protein of unknown function DUF1275; KEGG: dac:Daci_0305 hypothetical protein
YP_004485710.1	PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dac:Daci_0306 glycolate oxidase iron-sulfur subunit
YP_004485711.1	PFAM: Fertility inhibition FinO-like; KEGG: dac:Daci_0307 ProQ activator of osmoprotectant transporter ProP
YP_004485712.1	PFAM: AmiS/UreI transporter; KEGG: dac:Daci_0308 AmiS/UreI transporter
YP_004485713.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_0309 hypothetical protein
YP_004485714.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0310 lysophospholipid transporter LplT
YP_004485715.1	PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: dac:Daci_0311 alanine racemase
YP_004485716.1	KEGG: dac:Daci_0312 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004485717.1	PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: dac:Daci_0313 FAD-binding 9 siderophore-interacting domain-containing protein
YP_004485718.1	KEGG: dac:Daci_0314 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core
YP_004485719.1	KEGG: dac:Daci_0315 hypothetical protein
YP_004485720.1	TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: dac:Daci_0316 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV
YP_004485721.1	KEGG: dac:Daci_0317 hypothetical protein
YP_004485722.1	PFAM: Capsular polysaccharide synthesis; KEGG: dac:Daci_0318 hypothetical protein
YP_004485723.1	PFAM: O-antigen ligase-related; KEGG: dac:Daci_0319 O-antigen polymerase
YP_004485724.1	PFAM: Glycosyl transferase, group 1; KEGG: dac:Daci_0320 glycosyl transferase group 1 protein
YP_004485725.1	PFAM: Glycosyl transferase, family 2; KEGG: dac:Daci_0321 glycosyl transferase family protein
YP_004485726.1	KEGG: dac:Daci_0322 mannosyltransferase OCH1-related enzyme
YP_004485727.1	PFAM: GCN5-related N-acetyltransferase; KEGG: msv:Mesil_3046 GCN5-related N-acetyltransferase
YP_004485728.1	KEGG: dac:Daci_0326 hypothetical protein
YP_004485729.1	KEGG: dac:Daci_0327 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004485730.1	KEGG: dac:Daci_0328 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004485731.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0329 major facilitator transporter
YP_004485732.1	SMART: Helix-turn-helix, AraC domain; KEGG: dac:Daci_0330 AraC family transcriptional regulator
YP_004485733.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_0331 hypothetical protein
YP_004485734.1	PFAM: Peptidase M48, Ste24p; KEGG: dac:Daci_0332 peptidase M48 Ste24p
YP_004485735.1	KEGG: dac:Daci_0333 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004485736.1	KEGG: avn:Avin_21960 taurine catabolism dioxygenase TauD/TfdA family; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004485737.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_50370 ABC transporter permease protein
YP_004485738.1	PFAM: ABC transporter-like; KEGG: bbr:BB1019 ATP-binding ABC transporter protein; SMART: ATPase, AAA+ type, core
YP_004485739.1	KEGG: azl:AZL_016440 sulfonate/nitrate/taurine transport system substrate-binding protein
YP_004485740.1	KEGG: reu:Reut_C6078 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004485741.1	SMART: Beta-lactamase-like; KEGG: dac:Daci_0334 beta-lactamase domain-containing protein
YP_004485742.1	KEGG: dac:Daci_0335 hypothetical protein
YP_004485743.1	KEGG: dac:Daci_0336 NAD(P)(+) transhydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal
YP_004485744.1	KEGG: dac:Daci_0337 NAD(P) transhydrogenase subunit alpha part 2
YP_004485745.1	KEGG: dac:Daci_0338 NAD(P)(+) transhydrogenase; PFAM: NAD(P) transhydrogenase, beta subunit
YP_004485746.1	KEGG: xcv:XCV0820 putative CcdB antidote-like protein
YP_004485747.1	TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: dac:Daci_0339 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_004485748.1	PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: dac:Daci_0340 orotate phosphoribosyltransferase
YP_004485749.1	KEGG: dac:Daci_0341 hypothetical protein
YP_004485750.1	TIGRFAM: PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate related; KEGG: dac:Daci_0342 PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal
YP_004485751.1	KEGG: dac:Daci_0343 hypothetical protein
YP_004485752.1	KEGG: ctt:CtCNB1_0266 hypothetical protein
YP_004485753.1	PFAM: Nitroreductase-like; KEGG: dac:Daci_0345 nitroreductase
YP_004485754.1	KEGG: dac:Daci_0346 hypothetical protein
YP_004485755.1	KEGG: dac:Daci_0347 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT
YP_004485756.1	PFAM: Cystathionine beta-synthase, core; HPP; KEGG: dac:Daci_0348 CBS domain-containing protein
YP_004485757.1	PFAM: Beta-lactamase-related; KEGG: dac:Daci_0349 beta-lactamase
YP_004485758.1	KEGG: dac:Daci_0350 hypothetical protein
YP_004485759.1	TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; KEGG: dac:Daci_0351 glutamyl-tRNA(Gln) amidotransferase subunit B; SMART: Asn/Gln amidotransferase
YP_004485760.1	TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; KEGG: dac:Daci_0352 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase
YP_004485761.1	TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; KEGG: dac:Daci_0353 aspartyl/glutamyl-tRNA amidotransferase subunit C
YP_004485762.1	KEGG: dac:Daci_0354 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl
YP_004485763.1	KEGG: dac:Daci_0355 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC
YP_004485764.1	KEGG: dac:Daci_0356 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD
YP_004485765.1	TIGRFAM: Penicillin-binding protein 2; KEGG: dac:Daci_0357 penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004485766.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0358 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485767.1	KEGG: dac:Daci_0359 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004485768.1	KEGG: dac:Daci_0360 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004485769.1	PFAM: Protein of unknown function DUF81; KEGG: dac:Daci_0361 hypothetical protein
YP_004485770.1	KEGG: dac:Daci_0364 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_004485771.1	KEGG: dac:Daci_0365 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140
YP_004485772.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0366 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485773.1	PFAM: Mammalian cell entry related; KEGG: dac:Daci_0367 hypothetical protein
YP_004485774.1	PFAM: Protein of unknown function DUF330; KEGG: dac:Daci_0368 putative lipoprotein
YP_004485775.1	PFAM: CsbD-like; KEGG: dac:Daci_0369 CsbD family protein
YP_004485776.1	KEGG: dac:Daci_0370 hypothetical protein
YP_004485777.1	KEGG: dac:Daci_0371 hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif
YP_004485778.1	KEGG: dac:Daci_0372 multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related
YP_004485779.1	KEGG: dac:Daci_0373 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase
YP_004485780.1	PFAM: Nucleotidyltransferase; KEGG: neu:NE1075 DNA polymerase beta-like protein
YP_004485781.1	PFAM: Protein of unknown function DUF86; KEGG: neu:NE1074 hypothetical protein
YP_004485782.1	KEGG: dac:Daci_0374 hypothetical protein
YP_004485783.1	PFAM: Oxidoreductase, molybdopterin binding; KEGG: dac:Daci_0375 hypothetical protein
YP_004485784.1	PFAM: Putative Ig; KEGG: dac:Daci_0376 hypothetical protein
YP_004485785.1	KEGG: dac:Daci_0377 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004485786.1	KEGG: dac:Daci_0378 putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_004485787.1	PFAM: Mg2+ transporter protein, CorA-like; KEGG: dac:Daci_0379 Mg2 transporter protein CorA family protein
YP_004485788.1	KEGG: dac:Daci_0380 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase
YP_004485789.1	PFAM: Uncharacterised protein family UPF0093; KEGG: dac:Daci_0381 hypothetical protein
YP_004485790.1	PFAM: VanZ like protein; KEGG: dac:Daci_0382 VanZ family protein
YP_004485791.1	KEGG: dac:Daci_0383 ferredoxin-like protein
YP_004485792.1	KEGG: dac:Daci_0384 putative transmembrane protein
YP_004485793.1	KEGG: dac:Daci_0385 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_004485794.1	KEGG: dac:Daci_0386 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23
YP_004485795.1	KEGG: dac:Daci_0387 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7
YP_004485796.1	KEGG: dac:Daci_0388 elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004485797.1	TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; KEGG: dac:Daci_0389 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004485798.1	TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: ctt:CtCNB1_0305 ribosomal protein S10; PFAM: Ribosomal protein S10
YP_004485799.1	KEGG: dac:Daci_0391 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3
YP_004485800.1	PFAM: Ribosomal protein L4/L1e; KEGG: dac:Daci_0392 50S ribosomal protein L4
YP_004485801.1	PFAM: Ribosomal protein L25/L23; KEGG: dac:Daci_0393 50S ribosomal protein L23
YP_004485802.1	KEGG: dac:Daci_0394 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2
YP_004485803.1	KEGG: dac:Daci_0395 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15
YP_004485804.1	KEGG: dac:Daci_0396 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17
YP_004485805.1	TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: dac:Daci_0397 30S ribosomal protein S3; SMART: K Homology
YP_004485806.1	KEGG: dac:Daci_0398 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_004485807.1	KEGG: dac:Daci_0399 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29
YP_004485808.1	KEGG: dac:Daci_0400 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17
YP_004485809.1	PFAM: Redoxin; KEGG: dac:Daci_0401 redoxin domain-containing protein
YP_004485810.1	KEGG: dac:Daci_0402 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase
YP_004485811.1	KEGG: dac:Daci_0403 cytochrome b561
YP_004485812.1	PFAM: Cytochrome c prime; KEGG: dac:Daci_0404 cytochrome c prime
YP_004485813.1	PFAM: Redoxin; KEGG: dac:Daci_0405 redoxin domain-containing protein
YP_004485814.1	KEGG: dac:Daci_0406 hypothetical protein
YP_004485815.1	PFAM: Phosphotransferase system, fructose subfamily IIA component; KEGG: dac:Daci_0407 PTS system fructose subfamily transporter subunit IIA
YP_004485816.1	KEGG: dac:Daci_0408 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein
YP_004485817.1	TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: dac:Daci_0409 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region
YP_004485818.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Lipoate synthase; KEGG: dac:Daci_0410 lipoyl synthase; PFAM: Radical SAM
YP_004485819.1	PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: dac:Daci_0411 lipoate-protein ligase B
YP_004485820.1	KEGG: dac:Daci_0412 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493
YP_004485821.1	PFAM: ATPase, F0 complex, subunit I, proteobacteria-type; KEGG: dac:Daci_0413 putative ATP synthase protein I
YP_004485822.1	KEGG: dac:Daci_0414 F0F1 ATP synthase subunit A; TIGRFAM: ATPase, F0 complex, subunit A; PFAM: ATPase, F0 complex, subunit A
YP_004485823.1	TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: ATP synthase f0, C subunit; PFAM: ATPase, F0/V0 complex, subunit C
YP_004485824.1	TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: dac:Daci_0416 F0F1 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast
YP_004485825.1	TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: dac:Daci_0417 F0F1 ATP synthase subunit delta; PFAM: ATPase, F1 complex, OSCP/delta subunit
YP_004485826.1	KEGG: dac:Daci_0418 F0F1 ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
YP_004485827.1	KEGG: dac:Daci_0419 F0F1 ATP synthase subunit gamma; TIGRFAM: ATPase, F1 complex, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit
YP_004485828.1	TIGRFAM: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: dac:Daci_0420 F0F1 ATP synthase subunit beta; SMART: ATPase, AAA+ type, core
YP_004485829.1	KEGG: dac:Daci_0421 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal
YP_004485830.1	KEGG: dac:Daci_0422 hypothetical protein
YP_004485831.1	PFAM: Protein of unknown function DUF477; KEGG: dac:Daci_0423 hypothetical protein
YP_004485832.1	PFAM: Protein of unknown function DUF477; KEGG: dac:Daci_0424 hypothetical protein
YP_004485833.1	PFAM: LemA; KEGG: dac:Daci_0425 LemA family protein
YP_004485834.1	KEGG: dac:Daci_0426 alpha/beta hydrolase fold protein
YP_004485835.1	KEGG: dac:Daci_0427 hypothetical protein
YP_004485836.1	PFAM: Cytochrome c, class I; KEGG: dac:Daci_0498 class I cytochrome c
YP_004485837.1	KEGG: dac:Daci_0499 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004485838.1	KEGG: dac:Daci_0500 hydrophobe/amphiphile efflux-1 family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004485839.1	KEGG: dac:Daci_0501 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004485840.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; Transcriptional regulator, MAATS, C-terminal; KEGG: dac:Daci_0502 TetR family transcriptional regulator
YP_004485841.1	TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; KEGG: dac:Daci_0503 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004485842.1	KEGG: dac:Daci_0504 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein
YP_004485843.1	TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: dac:Daci_0505 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW
YP_004485844.1	TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal; KEGG: dac:Daci_0506 50S ribosomal protein L11; SMART: Ribosomal protein L11
YP_004485845.1	KEGG: dac:Daci_0507 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1
YP_004485846.1	KEGG: dac:Daci_0508 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_004485847.1	KEGG: dac:Daci_0509 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; Ribosomal protein 60S
YP_004485848.1	TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: dac:Daci_0510 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7
YP_004485849.1	SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: dac:Daci_0511 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5
YP_004485850.1	KEGG: dac:Daci_0512 hypothetical protein
YP_004485851.1	KEGG: dac:Daci_0513 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
YP_004485852.1	KEGG: dac:Daci_0514 putative proline rich signal peptide protein
YP_004485853.1	KEGG: dac:Daci_0515 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004485854.1	KEGG: dac:Daci_0516 two component fis family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region
YP_004485855.1	PFAM: Cupin 2, conserved barrel; KEGG: dac:Daci_0517 cupin 2 domain-containing protein
YP_004485856.1	PFAM: NnrS; KEGG: net:Neut_0621 NnrS family protein
YP_004485857.1	KEGG: dac:Daci_0518 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2
YP_004485858.1	PFAM: Protein of unknown function DUF474; KEGG: dac:Daci_0519 hypothetical protein
YP_004485859.1	TIGRFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: dac:Daci_0520 exodeoxyribonuclease V subunit gamma; PFAM: Exodeoxyribonuclease V, RecC subunit
YP_004485860.1	KEGG: dac:Daci_0521 exodeoxyribonuclease V subunit beta; TIGRFAM: Exodeoxyribonuclease V, beta subunit; PFAM: DNA helicase, UvrD/REP type
YP_004485861.1	TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: dac:Daci_0522 exodeoxyribonuclease V subunit alpha; SMART: ATPase, AAA+ type, core
YP_004485862.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: dac:Daci_0523 glutathione S-transferase domain-containing protein
YP_004485863.1	KEGG: dac:Daci_0524 hypothetical protein
YP_004485864.1	PFAM: DR1885-like metal-binding protein; KEGG: dac:Daci_0525 hypothetical protein
YP_004485865.1	KEGG: dac:Daci_0526 hypothetical protein
YP_004485866.1	PFAM: FIST domain, N-terminal; FIST C domain; KEGG: dac:Daci_0527 hypothetical protein
YP_004485867.1	KEGG: dac:Daci_0528 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004485868.1	KEGG: dac:Daci_0529 Ig domain-containing protein; PFAM: Bacterial Ig-like, group 1; SMART: Bacterial Ig-like, group 1
YP_004485869.1	PFAM: Flavodoxin/nitric oxide synthase; PepSY-associated TM helix; Oxidoreductase FAD/NAD(P)-binding; KEGG: dac:Daci_0530 flavodoxin/nitric oxide synthase
YP_004485870.1	KEGG: dac:Daci_0531 hypothetical protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004485871.1	PFAM: Monooxygenase, FAD-binding; KEGG: dac:Daci_0532 FAD dependent oxidoreductase
YP_004485872.1	KEGG: dac:Daci_0533 hypothetical protein
YP_004485873.1	KEGG: dac:Daci_0534 hypothetical protein
YP_004485874.1	SMART: Helix-turn-helix type 3; KEGG: dac:Daci_0535 XRE family transcriptional regulator
YP_004485875.1	KEGG: dac:Daci_0536 hypothetical protein
YP_004485876.1	KEGG: dac:Daci_0537 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; Major facilitator superfamily MFS-1; SMART: Phospholipid/glycerol acyltransferase
YP_004485877.1	KEGG: dac:Daci_0538 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase
YP_004485878.1	PFAM: YiaAB two helix; KEGG: dac:Daci_0539 YiaAB two helix domain-containing protein
YP_004485879.1	KEGG: dac:Daci_0540 hypothetical protein
YP_004485880.1	PFAM: Uncharacterised conserved protein UCP028477; KEGG: dac:Daci_0541 hypothetical protein
YP_004485881.1	KEGG: dac:Daci_0542 hypothetical protein
YP_004485882.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_0543 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004485883.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_0544 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004485884.1	KEGG: dac:Daci_0545 hypothetical protein
YP_004485885.1	KEGG: dac:Daci_0546 hypothetical protein
YP_004485886.1	KEGG: dac:Daci_0547 hypothetical protein
YP_004485887.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0548 LysR family transcriptional regulator
YP_004485888.1	TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; KEGG: dac:Daci_0549 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_004485889.1	PFAM: UspA; KEGG: dac:Daci_0550 UspA domain-containing protein
YP_004485890.1	KEGG: dac:Daci_0551 hypothetical protein
YP_004485891.1	KEGG: dac:Daci_0552 phospholipase A1; PFAM: Phospholipase A1
YP_004485892.1	KEGG: dac:Daci_0553 hypothetical protein
YP_004485893.1	PFAM: DNA helicase, UvrD/REP type; KEGG: dac:Daci_0554 UvrD/REP helicase
YP_004485894.1	KEGG: dac:Daci_0555 hypothetical protein
YP_004485895.1	PFAM: MIRO-like; KEGG: dac:Daci_0556 Miro domain-containing protein
YP_004485896.1	KEGG: dac:Daci_0557 hypothetical protein
YP_004485897.1	KEGG: dac:Daci_0558 hypothetical protein
YP_004485898.1	PFAM: Auxin efflux carrier; KEGG: dac:Daci_0559 auxin efflux carrier
YP_004485899.1	KEGG: dac:Daci_0560 glycosyltransferase
YP_004485900.1	PFAM: Glycosyl transferase, family 2; KEGG: dac:Daci_0561 glycosyl transferase family protein
YP_004485901.1	PFAM: GtrA-like protein; KEGG: dac:Daci_0562 GtrA family protein
YP_004485902.1	PFAM: YdjC-like protein; KEGG: dac:Daci_0563 YdjC family protein
YP_004485903.1	TIGRFAM: L-asparaginase, type II; KEGG: dac:Daci_0564 L-asparaginase, type II; PFAM: Asparaginase/glutaminase
YP_004485904.1	TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: dac:Daci_0565 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004485905.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: dac:Daci_0566 uroporphyrinogen decarboxylase
YP_004485906.1	KEGG: dac:Daci_0567 hypothetical protein
YP_004485907.1	PFAM: Crotonase, core; KEGG: dac:Daci_0568 enoyl-CoA hydratase/isomerase
YP_004485908.1	KEGG: dac:Daci_0569 phenylacetic acid degradation protein PaaD; TIGRFAM: Phenylacetic acid degradation protein PaaD; Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004485909.1	TIGRFAM: Phenylacetate-CoA ligase; KEGG: dac:Daci_0570 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004485910.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_0571 TetR family transcriptional regulator
YP_004485911.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0572 extracellular ligand-binding receptor
YP_004485912.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0573 inner-membrane translocator
YP_004485913.1	PFAM: ABC transporter-like; Bacterial inner-membrane translocator; KEGG: dac:Daci_0574 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485914.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0575 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485916.1	KEGG: dac:Daci_0578 hypothetical protein
YP_004485917.1	KEGG: ctt:CtCNB1_4500 hypothetical protein
YP_004485918.1	PFAM: Monooxygenase, FAD-binding; KEGG: dac:Daci_0579 FAD-dependent oxidoreductase
YP_004485919.1	KEGG: dac:Daci_0580 beta-lactamase domain-containing protein
YP_004485920.1	manually curated; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; KEGG: dac:Daci_0581 IclR family transcriptional regulator; SMART: Transcriptional regulator IclR, N-terminal
YP_004485921.1	KEGG: dac:Daci_0582 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004485922.1	KEGG: dac:Daci_0583 putative hemolysin-like protein
YP_004485923.1	KEGG: dac:Daci_0584 CoA-binding domain-containing protein
YP_004485924.1	TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: dac:Daci_0585 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA
YP_004485925.1	KEGG: dac:Daci_0586 hypothetical protein
YP_004485926.1	KEGG: dac:Daci_0587 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane region
YP_004485927.1	KEGG: dac:Daci_0588 hypothetical protein
YP_004485928.1	PFAM: Creatininase; KEGG: dac:Daci_0589 creatininase
YP_004485929.1	KEGG: dac:Daci_0590 hypothetical protein
YP_004485930.1	PFAM: Phosphoglycerate mutase; KEGG: dac:Daci_0591 phosphoglycerate mutase
YP_004485931.1	KEGG: dac:Daci_0592 PhzF family phenazine biosynthesis protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_004485932.1	KEGG: dac:Daci_0593 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/II
YP_004485933.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_0594 lysine exporter protein LysE/YggA
YP_004485934.1	KEGG: dac:Daci_0595 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004485935.1	KEGG: dac:Daci_0596 RNA polymerase sigma 28 subunit FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_004485936.1	KEGG: dac:Daci_0597 hypothetical protein
YP_004485937.1	TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: dac:Daci_0598 GTP-binding signal recognition particle; SMART: ATPase, AAA+ type, core
YP_004485938.1	KEGG: dac:Daci_0599 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP
YP_004485939.1	PFAM: Type III secretion exporter; KEGG: dac:Daci_0600 type III secretion exporter
YP_004485940.1	PFAM: Chemotaxis phosphatase, CheZ; KEGG: dac:Daci_0601 chemotaxis phosphatase CheZ
YP_004485941.1	KEGG: dac:Daci_0602 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004485942.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dac:Daci_0603 OmpA/MotB domain-containing protein
YP_004485943.1	KEGG: dac:Daci_0604 MotA/TolQ/ExbB proton channel
YP_004485944.1	PFAM: Glycosyl transferase, family 2; KEGG: rso:RS00815 hypothetical protein
YP_004485945.1	PFAM: Tetratricopeptide TPR-1; KEGG: dac:Daci_0616 TPR repeat-containing protein
YP_004485946.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: dac:Daci_0618 flagellin domain-containing protein
YP_004485947.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: dac:Daci_0618 flagellin domain-containing protein
YP_004485948.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: dac:Daci_0618 flagellin domain-containing protein
YP_004485949.1	PFAM: Methyltransferase type 11; KEGG: pph:Ppha_2592 methyltransferase type 11
YP_004485950.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: dac:Daci_0618 flagellin domain-containing protein
YP_004485951.1	PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; Flagellin hook, IN motif; KEGG: dac:Daci_0619 flagellar hook-associated 2 domain-containing protein
YP_004485952.1	KEGG: dac:Daci_0620 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS
YP_004485953.1	KEGG: dac:Daci_0621 flagellar protein FliT
YP_004485954.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: dac:Daci_0622 putative signal transduction protein
YP_004485955.1	KEGG: dac:Daci_0623 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal
YP_004485956.1	KEGG: dac:Daci_0624 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004485957.1	TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; KEGG: dac:Daci_0625 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2
YP_004485958.1	PFAM: Flagellar P-ring protein; KEGG: dac:Daci_0626 flagellar basal body P-ring protein
YP_004485959.1	KEGG: dac:Daci_0627 flagellar L-ring protein; HAMAP: Flagellar L-ring protein; PFAM: Flagellar L-ring protein
YP_004485960.1	KEGG: dac:Daci_0628 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004485961.1	KEGG: dac:Daci_0629 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal
YP_004485962.1	KEGG: dac:Daci_0630 flagellar basal body FlaE domain-containing protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal
YP_004485963.1	PFAM: Flagellar hook capping protein; KEGG: dac:Daci_0631 flagellar hook capping protein
YP_004485964.1	KEGG: dac:Daci_0632 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004485965.1	KEGG: dac:Daci_0633 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal
YP_004485966.1	TIGRFAM: Flagella basal body P-ring formation protein FlgA; KEGG: dac:Daci_0634 SAF domain-containing protein
YP_004485967.1	PFAM: Anti-sigma-28 factor, FlgM; KEGG: dac:Daci_0635 putative anti-sigma-28 factor FlgM
YP_004485968.1	KEGG: dac:Daci_0636 hypothetical protein
YP_004485969.1	TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: dac:Daci_0637 flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE
YP_004485970.1	KEGG: dac:Daci_0638 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal
YP_004485971.1	KEGG: dac:Daci_0639 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG
YP_004485972.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dac:Daci_0640 flagellar assembly protein FliH
YP_004485973.1	TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; KEGG: dac:Daci_0641 flagellar protein export ATPase FliI; SMART: ATPase, AAA+ type, core
YP_004485974.1	TIGRFAM: Flagellar export FliJ; KEGG: dac:Daci_0642 flagellar export protein FliJ
YP_004485975.1	PFAM: Flagellar hook-length control protein; KEGG: dac:Daci_0643 flagellar hook-length control protein
YP_004485976.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: dac:Daci_0644 flagellar basal body-associated protein FliL
YP_004485977.1	KEGG: dac:Daci_0645 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA)
YP_004485978.1	KEGG: dac:Daci_0646 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA)
YP_004485979.1	PFAM: Flagellar biosynthesis protein, FliO; KEGG: dac:Daci_0647 flagellar biosynthesis protein FliO
YP_004485980.1	KEGG: dac:Daci_0648 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein
YP_004485981.1	KEGG: dac:Daci_0649 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3
YP_004485982.1	KEGG: dac:Daci_0650 flagellar biosynthetic protein FliR; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein
YP_004485983.1	KEGG: dac:Daci_0651 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004485984.1	KEGG: dac:Daci_0652 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004485985.1	KEGG: dac:Daci_0653 hypothetical protein
YP_004485986.1	KEGG: dac:Daci_0654 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004485987.1	KEGG: dac:Daci_0655 CheA signal transduction histidine kinase; PFAM: CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like
YP_004485988.1	KEGG: dac:Daci_0656 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004485989.1	PFAM: MCP methyltransferase, CheR-type; KEGG: dac:Daci_0657 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type
YP_004485990.1	HAMAP: Chemoreceptor glutamine deamidase cheD; KEGG: dac:Daci_0658 chemoreceptor glutamine deamidase CheD; PFAM: Chemoreceptor glutamine deamidase cheD
YP_004485991.1	KEGG: dac:Daci_0659 response regulator receiver modulated CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region; manually curated; HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; SMART: Signal transduction response regulator, receiver region
YP_004485992.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0660 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004485993.1	KEGG: dac:Daci_5993 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004485994.1	KEGG: dac:Daci_5992 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004485995.1	KEGG: dac:Daci_5991 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004485996.1	KEGG: dac:Daci_5990 carbonate dehydratase; PFAM: Carbonic anhydrase
YP_004485997.1	HAMAP: Isocitrate dehydrogenase kinasephosphatase; KEGG: dac:Daci_5989 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase
YP_004485998.1	KEGG: dac:Daci_5988 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004485999.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: dac:Daci_5987 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_004486000.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_5986 short chain dehydrogenase
YP_004486001.1	KEGG: dac:Daci_5985 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004486002.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_5984 alpha/beta hydrolase fold protein
YP_004486003.1	PFAM: Protein of unknown function DUF421; KEGG: dac:Daci_5983 hypothetical protein
YP_004486004.1	KEGG: dac:Daci_5982 hypothetical protein
YP_004486005.1	KEGG: dac:Daci_5981 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004486006.1	KEGG: dac:Daci_5980 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004486007.1	KEGG: dac:Daci_5979 hypothetical protein
YP_004486008.1	KEGG: dac:Daci_5978 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004486009.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: dac:Daci_5977 glutathione S-transferase domain-containing protein
YP_004486010.1	KEGG: dac:Daci_5976 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486011.1	KEGG: dac:Daci_5975 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase
YP_004486012.1	KEGG: dac:Daci_5974 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, yjcE-like, bacteria; PFAM: Cation/H+ exchanger
YP_004486013.1	KEGG: dac:Daci_5973 propionyl-CoA carboxylase; PFAM: Carboxyl transferase
YP_004486014.1	PFAM: Crotonase, core; KEGG: dac:Daci_5972 enoyl-CoA hydratase/isomerase
YP_004486015.1	KEGG: dac:Daci_5971 putative transmembrane protein
YP_004486016.1	KEGG: dac:Daci_5970 carbamoyl-phosphate synthase subunit L; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment
YP_004486017.1	KEGG: dac:Daci_5969 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004486018.1	KEGG: dac:Daci_5968 hypothetical protein
YP_004486019.1	PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: dac:Daci_5967 hypothetical protein
YP_004486020.1	KEGG: dac:Daci_5966 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004486021.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5965 LysR family transcriptional regulator
YP_004486022.1	KEGG: dac:Daci_5964 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase
YP_004486023.1	PFAM: YbaK/aminoacyl-tRNA synthetase associated region; KEGG: dac:Daci_5963 YbaK/prolyl-tRNA synthetase associated region
YP_004486024.1	PFAM: Protein of unknown function DUF1289; KEGG: dac:Daci_5962 hypothetical protein
YP_004486025.1	PFAM: DSBA oxidoreductase; KEGG: dac:Daci_5961 DsbA oxidoreductase
YP_004486026.1	KEGG: dac:Daci_5960 CBS domain-containing protein; PFAM: Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cystathionine beta-synthase, core
YP_004486027.1	KEGG: dac:Daci_5959 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease
YP_004486028.1	KEGG: dac:Daci_5958 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP
YP_004486029.1	KEGG: dac:Daci_5957 SSS family solute/sodium (Na+) symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter
YP_004486030.1	PFAM: Protein of unknown function DUF485; KEGG: dac:Daci_5956 hypothetical protein
YP_004486031.1	PFAM: General substrate transporter; KEGG: dac:Daci_5955 general substrate transporter
YP_004486032.1	KEGG: dac:Daci_5954 porin
YP_004486033.1	KEGG: dac:Daci_5953 hypothetical protein
YP_004486034.1	KEGG: dac:Daci_5952 excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like
YP_004486035.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_5951 major facilitator transporter
YP_004486036.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5950 LysR family transcriptional regulator
YP_004486037.1	KEGG: dac:Daci_5949 hypothetical protein
YP_004486038.1	PFAM: General substrate transporter; KEGG: dac:Daci_5948 major facilitator transporter
YP_004486039.1	KEGG: dac:Daci_5947 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_004486040.1	PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; KEGG: dac:Daci_5946 IclR family transcriptional regulator
YP_004486041.1	KEGG: dac:Daci_5945 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004486042.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dac:Daci_5944 tripartite ATP-independent periplasmic transporter DctQ
YP_004486043.1	KEGG: dac:Daci_5943 TRAP dicarboxylate transporter subunit DctP; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004486044.1	KEGG: bge:BC1002_0492 transcriptional regulator, XRE family
YP_004486045.1	PFAM: Protein of unknown function DUF891; KEGG: bxe:Bxe_A3974 hypothetical protein
YP_004486046.1	KEGG: dac:Daci_5942 sodium/proline symporter; TIGRFAM: Sodium/proline symporter; Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter
YP_004486047.1	KEGG: dac:Daci_5941 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 3; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase
YP_004486048.1	PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: dac:Daci_5935 fimbrial biogenesis outer membrane usher protein
YP_004486049.1	PFAM: Pili assembly chaperone, N-terminal, bacterial; KEGG: dac:Daci_5934 pili assembly chaperone
YP_004486050.1	PFAM: Fimbrial protein, C-terminal; KEGG: dac:Daci_5933 fimbrial protein
YP_004486051.1	KEGG: dac:Daci_5932 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3
YP_004486052.1	KEGG: dac:Daci_5931 hypothetical protein
YP_004486053.1	PFAM: Glycosyl transferase, family 2; KEGG: dac:Daci_5930 glycosyl transferase family protein
YP_004486054.1	KEGG: aav:Aave_4063 hypothetical protein
YP_004486055.1	KEGG: aav:Aave_4064 hypothetical protein
YP_004486056.1	KEGG: dac:Daci_1317 hypothetical protein
YP_004486057.1	KEGG: aav:Aave_4118 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core
YP_004486058.1	PFAM: Acyltransferase 3; KEGG: aav:Aave_4061 acyltransferase 3
YP_004486059.1	KEGG: dac:Daci_5926 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2
YP_004486060.1	KEGG: aav:Aave_4063 hypothetical protein
YP_004486061.1	TIGRFAM: ATPase, P-type, K+-transporting, F subunit; PFAM: ATPase, P-type, K+-transporting, F subunit
YP_004486062.1	PFAM: ATPase, K+ transporting, A subunit; TIGRFAM: ATPase, K+ transporting, A subunit; HAMAP: ATPase, K+ transporting, A subunit; KEGG: dac:Daci_5925 potassium-transporting ATPase subunit A
YP_004486063.1	PFAM: Potassium transporting ATPase, C subunit; TIGRFAM: Potassium transporting ATPase, C subunit; HAMAP: Potassium transporting ATPase, C subunit; KEGG: dac:Daci_5924 potassium-transporting ATPase subunit C
YP_004486064.1	PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: dac:Daci_5923 K+-transporting ATPase subunit B
YP_004486065.1	KEGG: dac:Daci_5922 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_004486066.1	KEGG: dac:Daci_5921 osmosensitive K+ channel signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004486067.1	KEGG: dac:Daci_5920 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004486068.1	PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; HAMAP: Adenosylhomocysteinase; KEGG: dac:Daci_5919 S-adenosyl-L-homocysteine hydrolase
YP_004486069.1	PFAM: RNA-binding S4; Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dac:Daci_5918 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_004486070.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: dac:Daci_5917 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase
YP_004486071.1	KEGG: dac:Daci_5916 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A
YP_004486072.1	PFAM: Protein of unknown function DUF519; KEGG: dac:Daci_5915 hypothetical protein
YP_004486073.1	KEGG: dac:Daci_5914 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13
YP_004486074.1	PFAM: Ribosomal protein S9; KEGG: dac:Daci_5913 30S ribosomal protein S9
YP_004486075.1	TIGRFAM: FeS cluster insertion; HAMAP: Iron--sulfur cluster insertion protein erpA; KEGG: dac:Daci_5912 iron-sulfur cluster insertion protein ErpA; PFAM: FeS cluster biogenesis
YP_004486076.1	KEGG: dac:Daci_5911 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004486077.1	TIGRFAM: Xanthine dehydrogenase, small subunit; KEGG: dac:Daci_5910 xanthine dehydrogenase small subunit; PFAM: Molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding; CO dehydrogenase flavoprotein, C-terminal
YP_004486078.1	TIGRFAM: Xanthine dehydrogenase, molybdopterin binding subunit; KEGG: dac:Daci_5909 xanthine dehydrogenase, molybdopterin-binding subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004486079.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: dac:Daci_5908 xanthine/uracil/vitamin C permease
YP_004486080.1	KEGG: dac:Daci_5907 anhydro-N-acetylmuramic acid kinase; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase
YP_004486081.1	PFAM: Peptidase M23; KEGG: dac:Daci_5906 peptidase M23B
YP_004486082.1	TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; KEGG: dac:Daci_5905 tyrosyl-tRNA synthetase; SMART: RNA-binding S4
YP_004486083.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5904 LysR family transcriptional regulator
YP_004486084.1	KEGG: dac:Daci_5903 UDP-N-acetylglucosamine pyrophosphorylase; manually curated; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_004486085.1	KEGG: dac:Daci_5902 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004486086.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; MASE2; KEGG: dac:Daci_5901 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004486087.1	KEGG: dac:Daci_5900 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004486088.1	PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: dac:Daci_5899 glucosamine--fructose-6-phosphate aminotransferase
YP_004486089.1	KEGG: dac:Daci_5898 hypothetical protein
YP_004486090.1	KEGG: axy:AXYL_05467 hypothetical protein
YP_004486091.1	KEGG: dac:Daci_5897 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004486092.1	KEGG: dac:Daci_5895 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004486093.1	PFAM: FecR protein; KEGG: dac:Daci_5894 anti-FecI sigma factor FecR
YP_004486094.1	KEGG: dac:Daci_5893 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004486095.1	KEGG: dac:Daci_5889 cell surface receptor IPT/TIG domain-containing protein; PFAM: Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG
YP_004486096.1	KEGG: dac:Daci_5888 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486097.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5887 TetR family transcriptional regulator
YP_004486098.1	PFAM: Amine oxidase; KEGG: dac:Daci_5886 amine oxidase
YP_004486099.1	PFAM: Protein of unknown function DUF1365; KEGG: dac:Daci_5885 hypothetical protein
YP_004486100.1	KEGG: dac:Daci_5884 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004486101.1	KEGG: dac:Daci_5883 hypothetical protein
YP_004486102.1	KEGG: dac:Daci_5882 sodium:galactoside symporter family protein
YP_004486103.1	KEGG: dac:Daci_5881 putative lipoprotein
YP_004486104.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_5880 short-chain dehydrogenase/reductase SDR
YP_004486105.1	KEGG: dac:Daci_5879 hypothetical protein
YP_004486106.1	KEGG: dac:Daci_5878 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004486107.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_5877 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004486108.1	KEGG: dac:Daci_5876 PhzF family phenazine biosynthesis protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_004486109.1	PFAM: DinB; KEGG: dac:Daci_5875 DinB family protein
YP_004486110.1	PFAM: Glycosyl transferase, family 2; KEGG: dac:Daci_5874 glycosyl transferase family protein
YP_004486111.1	PFAM: Methyltransferase type 12; KEGG: dac:Daci_5873 type 12 methyltransferase
YP_004486112.1	PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: dac:Daci_5872 LmbE family protein
YP_004486113.1	KEGG: dac:Daci_5871 putative acyl-CoA dehydrogenase-related protein
YP_004486114.1	KEGG: dac:Daci_5870 alpha,alpha-trehalose-phosphate synthase; PFAM: Glycosyl transferase, family 20
YP_004486115.1	TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: dac:Daci_5869 HAD family hydrolase; PFAM: Trehalose-phosphatase
YP_004486116.1	KEGG: cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I
YP_004486117.1	KEGG: vap:Vapar_1993 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal
YP_004486118.1	KEGG: cytochrome c
YP_004486119.1	PFAM: Cytochrome c, class I; KEGG: cytochrome c class I
YP_004486120.1	KEGG: dac:Daci_5868 hypothetical protein
YP_004486121.1	KEGG: dac:Daci_5867 hypothetical protein
YP_004486122.1	KEGG: dac:Daci_5866 hypothetical protein
YP_004486123.1	KEGG: aav:Aave_0015 hypothetical protein
YP_004486125.1	KEGG: dac:Daci_5865 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Protein of unknown function DUF2383
YP_004486126.1	KEGG: dac:Daci_5864 XRE family transcriptional regulator; PFAM: Protein of unknown function DUF2083,transcriptional regulator; Protein of unknown function DUF955; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004486127.1	PFAM: Thioesterase superfamily; KEGG: dac:Daci_5863 thioesterase superfamily protein
YP_004486128.1	TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: dac:Daci_5862 methylcitrate synthase; PFAM: Citrate synthase-like
YP_004486129.1	TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent; KEGG: dac:Daci_5861 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004486130.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5860 LysR family transcriptional regulator
YP_004486131.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5859 transcriptional regulatory protein NfxB
YP_004486132.1	KEGG: dac:Daci_5858 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004486133.1	KEGG: dac:Daci_5857 hydrophobe/amphiphile efflux-1 family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004486134.1	KEGG: dac:Daci_5856 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004486135.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: dac:Daci_5855 glutathione S-transferase domain-containing protein
YP_004486136.1	KEGG: dac:Daci_5854 protein-disulfide isomerase-like protein
YP_004486137.1	PFAM: FecR protein; KEGG: dac:Daci_5853 anti-FecI sigma factor FecR
YP_004486138.1	KEGG: dac:Daci_5852 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004486139.1	KEGG: dac:Daci_5851 precorrin-3B synthase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobG-like; PFAM: Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like
YP_004486140.1	KEGG: dac:Daci_5850 precorrin-8X methylmutase; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core
YP_004486141.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; KEGG: dac:Daci_5849 precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole methylase
YP_004486142.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; KEGG: dac:Daci_5848 precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole methylase
YP_004486143.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; KEGG: dac:Daci_5847 precorrin-6x reductase; PFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase
YP_004486144.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; KEGG: dac:Daci_5846 precorrin-6y C5,15-methyltransferase subunit CbiE; PFAM: Tetrapyrrole methylase
YP_004486145.1	KEGG: dac:Daci_5845 hypothetical protein
YP_004486146.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; KEGG: dac:Daci_5844 precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole methylase
YP_004486147.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase; KEGG: dac:Daci_5843 precorrin 6A synthase; PFAM: Tetrapyrrole methylase
YP_004486148.1	PFAM: Cupin 2, conserved barrel; KEGG: pol:Bpro_4237 hypothetical protein
YP_004486149.1	PFAM: N-formylglutamate amidohydrolase; KEGG: axy:AXYL_02314 N-formylglutamate amidohydrolase family protein 2
YP_004486150.1	KEGG: reu:Reut_A3359 hypothetical protein
YP_004486151.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cti:RALTA_A3106 putative transcriptional regulator, LysR family
YP_004486152.1	KEGG: dac:Daci_5840 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004486153.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5839 LysR family transcriptional regulator
YP_004486154.1	PFAM: Chloride channel, voltage gated; KEGG: pop:POPTR_589000 Cl-channel clc-7
YP_004486155.1	PFAM: MgtC/SapB transporter; KEGG: dac:Daci_5837 MgtC/SapB transporter
YP_004486156.1	KEGG: vap:Vapar_0434 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_004486157.1	KEGG: dac:Daci_4379 hypothetical protein
YP_004486158.1	KEGG: rpa:RPA1060 hypothetical protein
YP_004486159.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: dac:Daci_5836 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_004486160.1	KEGG: dac:Daci_5835 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486161.1	KEGG: dac:Daci_5832 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004486162.1	KEGG: dac:Daci_5831 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004486163.1	KEGG: dac:Daci_5830 hypothetical protein
YP_004486164.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_5829 major facilitator transporter
YP_004486165.1	KEGG: dac:Daci_5828 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; AraC protein, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain
YP_004486166.1	KEGG: dac:Daci_5827 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486167.1	KEGG: dac:Daci_5826 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004486168.1	PFAM: Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_5825 putative acyl-CoA dehydrogenase
YP_004486169.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5824 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486170.1	KEGG: dac:Daci_5823 sulfonate ABC transporter periplasmic sulfonate-binding protein
YP_004486171.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5822 binding-protein-dependent transport systems inner membrane component
YP_004486172.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5821 LysR family transcriptional regulator
YP_004486173.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_5820 porin
YP_004486174.1	KEGG: dac:Daci_5819 hypothetical protein
YP_004486175.1	KEGG: dac:Daci_5818 X-Pro dipeptidyl-peptidase domain-containing protein; TIGRFAM: CocE/NonD hydrolase; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S15
YP_004486176.1	KEGG: dac:Daci_5815 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004486177.1	PFAM: VRR-NUC; KEGG: dac:Daci_5814 VRR-NUC domain-containing protein
YP_004486178.1	SMART: Helicase, ATP-dependent, c2 type; Helicase-like, DEXD box c2 type; KEGG: dac:Daci_5813 helicase C2
YP_004486179.1	KEGG: dac:Daci_5812 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein
YP_004486180.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_5811 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004486181.1	KEGG: dac:Daci_5810 potassium efflux system protein; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal
YP_004486182.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5809 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486183.1	KEGG: dac:Daci_5808 putative ABC transporter permease
YP_004486184.1	PFAM: Protein of unknown function DUF990; KEGG: dac:Daci_5807 hypothetical protein
YP_004486185.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_5806 endoribonuclease L-PSP
YP_004486186.1	KEGG: dac:Daci_5805 hypothetical protein
YP_004486187.1	KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein; PFAM: Putative Ig; Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG
YP_004486188.1	PFAM: Phage Tail Collar; KEGG: dac:Daci_5803 tail collar domain-containing protein
YP_004486189.1	PFAM: Phage Tail Collar; KEGG: dac:Daci_5802 tail collar domain-containing protein
YP_004486190.1	PFAM: Phage Tail Collar; KEGG: dac:Daci_5801 tail collar domain-containing protein
YP_004486191.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_5800 GCN5-related N-acetyltransferase
YP_004486192.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5799 LysR family transcriptional regulator
YP_004486193.1	KEGG: dac:Daci_5798 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004486194.1	PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_5797 dimethylmenaquinone methyltransferase
YP_004486195.1	KEGG: dac:Daci_5796 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004486196.1	KEGG: dac:Daci_5795 hypothetical protein
YP_004486197.1	KEGG: dac:Daci_5794 hypothetical protein
YP_004486198.1	PFAM: Fimbrial protein, C-terminal; KEGG: dac:Daci_5793 fimbrial protein
YP_004486199.1	TIGRFAM: Cysteine desulfurase, SufS; KEGG: dac:Daci_5792 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004486200.1	KEGG: dac:Daci_5791 major membrane protein I
YP_004486201.1	KEGG: dac:Daci_5790 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004486202.1	KEGG: dac:Daci_5789 serine O-acetyltransferase
YP_004486203.1	SMART: Rhodanese-like; KEGG: dac:Daci_5788 rhodanese domain-containing protein
YP_004486204.1	TIGRFAM: Natural resistance-associated macrophage protein; HAMAP: Manganese transport protein mntH; KEGG: dac:Daci_5787 Mn2+/Fe2+ transporter; PFAM: Natural resistance-associated macrophage protein
YP_004486205.1	KEGG: dac:Daci_5786 hypothetical protein
YP_004486206.1	KEGG: dac:Daci_5785 hypothetical protein
YP_004486207.1	KEGG: dac:Daci_5784 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain
YP_004486208.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_5783 hypothetical protein
YP_004486209.1	PFAM: ThiJ/PfpI; KEGG: dac:Daci_5782 ThiJ/PfpI domain-containing protein
YP_004486210.1	KEGG: dac:Daci_5781 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486211.1	PFAM: Helix-turn-helix, HxlR type; KEGG: dac:Daci_5780 HxlR family transcriptional regulator
YP_004486212.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_5779 short-chain dehydrogenase/reductase SDR
YP_004486213.1	KEGG: dac:Daci_5778 hypothetical protein
YP_004486214.1	KEGG: dac:Daci_5776 hypothetical protein
YP_004486215.1	KEGG: dac:Daci_5775 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004486216.1	TIGRFAM: Cystathionine beta-lyase, bacterial; KEGG: dac:Daci_5774 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004486217.1	KEGG: dac:Daci_5773 hypothetical protein
YP_004486218.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5772 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486219.1	KEGG: dac:Daci_5771 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004486220.1	KEGG: dac:Daci_5770 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004486221.1	KEGG: dac:Daci_5769 class I/II aminotransferase; PFAM: Aminotransferase, class I/II
YP_004486222.1	KEGG: dac:Daci_5768 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004486223.1	KEGG: dac:Daci_5767 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004486224.1	KEGG: dac:Daci_5766 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004486225.1	KEGG: dac:Daci_5765 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004486226.1	KEGG: dac:Daci_5764 hypothetical protein
YP_004486227.1	PFAM: Fimbrial protein, C-terminal; KEGG: dac:Daci_5763 fimbrial protein
YP_004486228.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: dac:Daci_5762 ADP-ribosylation/crystallin J1
YP_004486229.1	KEGG: dac:Daci_5761 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02464; PFAM: Conserved hypothetical protein CHP02464
YP_004486230.1	KEGG: dac:Daci_5760 phosphate acetyltransferase
YP_004486231.1	KEGG: dac:Daci_5760 phosphate acetyltransferase; HAMAP: RNA 2'-phosphotransferase; PFAM: Phosphotransferase KptA/Tpt1
YP_004486232.1	KEGG: dac:Daci_5759 hypothetical protein
YP_004486233.1	PFAM: Band 7 protein; KEGG: dac:Daci_5758 band 7 protein
YP_004486234.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_5757 NUDIX hydrolase
YP_004486235.1	KEGG: dac:Daci_5756 serine/threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004486236.1	PFAM: YheO-like; KEGG: dac:Daci_5755 YheO domain-containing protein
YP_004486237.1	PFAM: YbaK/aminoacyl-tRNA synthetase associated region; KEGG: dac:Daci_5754 YbaK/prolyl-tRNA synthetase associated region
YP_004486238.1	PFAM: CHAD; KEGG: dac:Daci_5753 CHAD domain-containing protein
YP_004486239.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_5752 TonB-dependent receptor
YP_004486240.1	PFAM: Periplasmic binding protein; KEGG: dac:Daci_5751 periplasmic-binding protein
YP_004486241.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_5750 transport system permease
YP_004486242.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5749 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486243.1	PFAM: Luciferase-like, subgroup; KEGG: dac:Daci_5748 luciferase family protein
YP_004486244.1	KEGG: dac:Daci_5747 cobalamin biosynthesis protein CobW; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobW; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
YP_004486245.1	TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: dac:Daci_5746 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase
YP_004486246.1	PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: dac:Daci_5745 magnesium chelatase; SMART: ATPase, AAA+ type, core
YP_004486247.1	manually curated; KEGG: dac:Daci_5744 hypothetical protein
YP_004486248.1	KEGG: dac:Daci_5743 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004486249.1	KEGG: dac:Daci_5742 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004486250.1	KEGG: dac:Daci_5741 hydrophobe/amphiphile efflux-1 family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004486251.1	KEGG: dac:Daci_5740 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004486252.1	KEGG: dac:Daci_5739 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004486253.1	KEGG: dac:Daci_5738 adenylate/guanylate cyclase; PFAM: Ferredoxin; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase
YP_004486254.1	KEGG: dac:Daci_5737 hypothetical protein
YP_004486255.1	PFAM: DoxX; KEGG: dac:Daci_5736 DoxX family protein
YP_004486256.1	KEGG: dac:Daci_5735 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004486257.1	KEGG: dac:Daci_5734 aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004486258.1	KEGG: dac:Daci_5733 hypothetical protein
YP_004486259.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_5732 extracellular ligand-binding receptor
YP_004486260.1	PFAM: Protein of unknown function DUF969; KEGG: dac:Daci_5731 hypothetical protein
YP_004486261.1	PFAM: Protein of unknown function DUF979; KEGG: dac:Daci_5730 hypothetical protein
YP_004486262.1	PFAM: Peptidase C15, pyroglutamyl peptidase I; TIGRFAM: Peptidase C15, pyroglutamyl peptidase I; HAMAP: Pyrrolidone-carboxylate peptidase; KEGG: dac:Daci_5729 pyrrolidone-carboxylate peptidase
YP_004486263.1	KEGG: dac:Daci_5728 LamB/YcsF family protein; HAMAP: UPF0271 protein ybgL; PFAM: LamB/YcsF
YP_004486264.1	TIGRFAM: Allophanate hydrolase subunit 2; Conserved hypothetical protein CHP00370; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: dac:Daci_5727 allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1
YP_004486265.1	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase subunit L; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment
YP_004486266.1	KEGG: dac:Daci_5725 5'-nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase
YP_004486267.1	TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; Copper ion-binding; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dac:Daci_5724 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_004486268.1	TIGRFAM: Lumazine-binding protein; KEGG: dac:Daci_5723 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_004486269.1	KEGG: dac:Daci_5722 hypothetical protein
YP_004486271.1	KEGG: dac:Daci_5721 hypothetical protein
YP_004486272.1	KEGG: dac:Daci_5720 putative heat-shock chaperone protein
YP_004486273.1	KEGG: dac:Daci_5719 DnaK-related protein
YP_004486274.1	KEGG: dac:Daci_5718 peptidase S1 and S6 chymotrypsin/Hap
YP_004486275.1	PFAM: Aldehyde dehydrogenase; KEGG: dac:Daci_5717 aldehyde dehydrogenase
YP_004486276.1	KEGG: dac:Daci_5716 acetyltransferase
YP_004486277.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: dac:Daci_5715 fusaric acid resistance protein region
YP_004486278.1	KEGG: dac:Daci_5714 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004486279.1	KEGG: dac:Daci_5713 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0324, bacteria; PFAM: Uncharacterised protein family UPF0324, prokaryote
YP_004486280.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5712 LysR family transcriptional regulator
YP_004486281.1	PFAM: CreA; KEGG: dac:Daci_5711 CreA family protein
YP_004486282.1	TIGRFAM: Cyanophycin synthetase; KEGG: dac:Daci_5710 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; Mur ligase, C-terminal
YP_004486283.1	TIGRFAM: Cyanophycin synthetase; KEGG: dac:Daci_5709 cyanophycin synthetase; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
YP_004486284.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: dac:Daci_5708 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486285.1	PFAM: Domain of unknown function DUF1854; KEGG: dac:Daci_5707 hypothetical protein
YP_004486286.1	KEGG: dac:Daci_5706 hypothetical protein
YP_004486287.1	PFAM: EF-Hand domain; KEGG: dac:Daci_5705 calcium-binding EF-hand-containing protein
YP_004486288.1	KEGG: dac:Daci_5704 5'-nucleotidase; PFAM: 5-nucleotidase
YP_004486289.1	KEGG: dac:Daci_5703 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain
YP_004486290.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_5702 glutathione S-transferase domain-containing protein
YP_004486291.1	KEGG: dac:Daci_5701 helix-turn-helix type 11 domain-containing protein
YP_004486292.1	KEGG: dac:Daci_5700 luciferase family protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup
YP_004486293.1	KEGG: dac:Daci_5699 hypothetical protein
YP_004486294.1	TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: dac:Daci_5698 general secretory pathway protein E; SMART: ATPase, AAA+ type, core
YP_004486295.1	KEGG: dac:Daci_5697 general secretion pathway protein D; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like
YP_004486296.1	KEGG: dac:Daci_5696 putative general secretory pathway N transmembrane protein
YP_004486297.1	PFAM: General secretion pathway M protein; KEGG: dac:Daci_5695 hypothetical protein
YP_004486298.1	PFAM: General secretion pathway L; KEGG: dac:Daci_5694 general secretion pathway L
YP_004486299.1	KEGG: dac:Daci_5693 general secretion pathway protein K
YP_004486300.1	KEGG: dac:Daci_5692 hypothetical protein
YP_004486301.1	KEGG: dac:Daci_5691 type II secretion system protein I/J; TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein I/J; Prepilin-type cleavage/methylation, N-terminal
YP_004486302.1	TIGRFAM: General secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal; KEGG: dac:Daci_5690 general secretion pathway protein H
YP_004486303.1	KEGG: dac:Daci_5689 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal
YP_004486304.1	KEGG: dac:Daci_5688 hypothetical protein
YP_004486305.1	PFAM: Phosphoglycerate mutase; KEGG: dac:Daci_5687 phosphoglycerate mutase
YP_004486306.1	KEGG: dac:Daci_5686 cobalamin-5-phosphate synthase CobS; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase
YP_004486307.1	KEGG: dac:Daci_5685 threonine dehydratase; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal
YP_004486308.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: dac:Daci_5684 OsmC family protein
YP_004486309.1	HAMAP: 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; KEGG: dac:Daci_5683 putative ubiquinone biosynthesis protein
YP_004486310.1	KEGG: dac:Daci_5682 porin
YP_004486311.1	PFAM: Porin, Gram-negative type; KEGG: ctt:CtCNB1_0642 gram-negative type outer membrane porin protein
YP_004486312.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dac:Daci_5679 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004486313.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5678 TetR family transcriptional regulator
YP_004486314.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: dac:Daci_5677 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004486315.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: dac:Daci_5676 RpiR family transcriptional regulator
YP_004486316.1	KEGG: dac:Daci_5675 transaldolase B; TIGRFAM: Transaldolase AB; PFAM: Transaldolase
YP_004486317.1	HAMAP: Phosphoglucose isomerase (PGI); KEGG: dac:Daci_5674 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI)
YP_004486318.1	KEGG: dac:Daci_5673 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004486319.1	KEGG: dac:Daci_5672 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004486320.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dac:Daci_5671 extracellular solute-binding protein
YP_004486321.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5670 binding-protein-dependent transport systems inner membrane component
YP_004486322.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5669 binding-protein-dependent transport systems inner membrane component
YP_004486323.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dac:Daci_5668 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004486324.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dac:Daci_5667 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004486325.1	PFAM: Amidohydrolase 3; KEGG: dac:Daci_5666 amidohydrolase 3
YP_004486326.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: dac:Daci_5665 cobalamin synthesis protein P47K
YP_004486327.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5664 LysR family transcriptional regulator
YP_004486328.1	PFAM: Protein of unknown function DUF1338; KEGG: dac:Daci_5663 hypothetical protein
YP_004486329.1	KEGG: dac:Daci_5662 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/II
YP_004486330.1	TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: dac:Daci_5661 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1
YP_004486331.1	KEGG: dac:Daci_5660 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10, subgroup
YP_004486332.1	KEGG: axy:AXYL_02944 RNA polymerase sigma factor sigma-70 family protein 4; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2
YP_004486333.1	PFAM: FecR protein; KEGG: axy:AXYL_02945 FecR family protein 11
YP_004486334.1	KEGG: ppu:PP_0669 outer membrane ferric siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004486335.1	KEGG: pop:POPTR_583746 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004486336.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: dac:Daci_3283 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486337.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5659 TetR family transcriptional regulator
YP_004486338.1	PFAM: Protein of unknown function DUF1348; KEGG: dac:Daci_5658 hypothetical protein
YP_004486339.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dac:Daci_5652 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004486340.1	PFAM: Protein of unknown function DUF779; KEGG: dac:Daci_5651 hypothetical protein
YP_004486341.1	PFAM: Aldehyde dehydrogenase; KEGG: dac:Daci_5650 aldehyde dehydrogenase
YP_004486342.1	KEGG: dac:Daci_5649 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004486343.1	PFAM: Uncharacterised protein family UPF0027; KEGG: dac:Daci_5648 hypothetical protein
YP_004486344.1	KEGG: azc:AZC_1488 putative transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004486345.1	PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: mrd:Mrad2831_2417 peptidase M20
YP_004486346.1	KEGG: reh:H16_B0606 extra-cytoplasmic solute receptor
YP_004486347.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5637 LysR family transcriptional regulator
YP_004486348.1	KEGG: dac:Daci_5636 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004486349.1	KEGG: dac:Daci_5635 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004486350.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: axy:AXYL_02555 LysR family regulatory helix-turn-helix protein 71
YP_004486351.1	PFAM: Endoribonuclease L-PSP; KEGG: axy:AXYL_02554 endoribonuclease L-PSP family protein 8
YP_004486352.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5634 LysR family transcriptional regulator
YP_004486353.1	KEGG: dac:Daci_5633 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004486354.1	KEGG: dac:Daci_5632 5-oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal
YP_004486355.1	KEGG: dac:Daci_5631 5-oxoprolinase; PFAM: Hydantoinase B/oxoprolinase
YP_004486356.1	KEGG: dac:Daci_5630 hypothetical protein
YP_004486357.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: dac:Daci_5629 cobalamin synthesis protein P47K
YP_004486358.1	KEGG: dac:Daci_5628 hypothetical protein
YP_004486359.1	KEGG: dac:Daci_5627 porin
YP_004486360.1	KEGG: dac:Daci_5626 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004486361.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5625 LysR family transcriptional regulator
YP_004486362.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_5624 hypothetical protein
YP_004486363.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5623 LysR family transcriptional regulator
YP_004486364.1	KEGG: dac:Daci_5622 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
YP_004486365.1	KEGG: dac:Daci_5621 2Fe-2S iron-sulfur cluster-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin
YP_004486366.1	KEGG: tmz:Tmz1t_2110 hypothetical protein
YP_004486367.1	manually curated; TIGRFAM: Addiction module toxin, RelE/StbE; KEGG: tin:Tint_3241 addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system
YP_004486368.1	KEGG: pfl:PFL_3497 regulatory protein PchR, putative; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486369.1	KEGG: axy:AXYL_04233 Fe(3+)-pyochelin receptor 2; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004486370.1	PFAM: Periplasmic binding protein; KEGG: pfl:PFL_3500 solute-binding periplasmic protein of iron/siderophore ABC transporter
YP_004486371.1	PFAM: Bacterial transport system permease protein; KEGG: pfl:PFL_3501 heme/hemin ABC transporter, permease protein
YP_004486372.1	PFAM: ABC transporter-like; KEGG: pfl:PFL_3502 iron(III) dicitrate transport system, ATP-binding protein FecE; SMART: ATPase, AAA+ type, core
YP_004486373.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: gvi:glr1300 HlyB/MsbA family ABC transporter; SMART: ATPase, AAA+ type, core
YP_004486374.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: gvi:glr1301 HlyB/MsbA family ABC transporter; SMART: ATPase, AAA+ type, core
YP_004486375.1	KEGG: dac:Daci_5620 cytochrome c, mono-and diheme variant-like protein
YP_004486376.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5619 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486377.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5618 binding-protein-dependent transport systems inner membrane component
YP_004486378.1	KEGG: dac:Daci_5617 ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic protein
YP_004486379.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: dac:Daci_5616 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004486380.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dac:Daci_5615 2OG-Fe(II) oxygenase
YP_004486381.1	PFAM: NLPA lipoprotein; KEGG: dac:Daci_5614 NlpA lipoprotein
YP_004486382.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5613 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486383.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5612 binding-protein-dependent transport systems inner membrane component
YP_004486384.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_5611 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004486385.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5610 LysR family transcriptional regulator
YP_004486386.1	KEGG: dac:Daci_5609 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004486387.1	KEGG: dac:Daci_5608 cytidyltransferase-like protein; TIGRFAM: Cytidyltransferase-related; PFAM: NUDIX hydrolase domain; Cytidylyltransferase
YP_004486388.1	KEGG: dac:Daci_5607 NAD+ synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004486389.1	KEGG: dac:Daci_5606 nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like
YP_004486390.1	KEGG: dac:Daci_5605 hypothetical protein
YP_004486391.1	KEGG: aav:Aave_0947 hypothetical protein
YP_004486392.1	PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; manually curated; KEGG: xtr:100492149 xanthan biosynthesis protein xanB-like; TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_004486393.1	PFAM: ABC-2 type transporter; KEGG: net:Neut_0146 ABC-2 type transporter
YP_004486394.1	PFAM: ABC transporter-like; KEGG: mes:Meso_3694 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004486395.1	PFAM: Glycosyl transferase, family 2; Methyltransferase type 12; Glycosyl transferase, group 1; KEGG: bur:Bcep18194_A3975 polysaccharide pyruvyl transferase
YP_004486396.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; KEGG: alv:Alvin_2140 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004486397.1	manually curated; KEGG: mms:mma_2263 hypothetical protein
YP_004486398.1	PFAM: Glycosyl transferase, group 1; KEGG: ppw:PputW619_1410 glycosyl transferase group 1
YP_004486399.1	PFAM: Glycosyl transferase, group 1; KEGG: aav:Aave_0964 glycosyl transferase, group 1
YP_004486400.1	PFAM: Tetratricopeptide TPR-1; KEGG: aav:Aave_0965 TPR repeat-containing protein
YP_004486401.1	TIGRFAM: S-adenosylmethionine synthetase; KEGG: dac:Daci_5604 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase
YP_004486402.1	KEGG: dac:Daci_5603 lipid A biosynthesis acyltransferase; manually curated; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_004486403.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: dac:Daci_5602 lipid A biosynthesis acyltransferase
YP_004486404.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_5601 alpha/beta hydrolase fold protein
YP_004486405.1	TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: dac:Daci_5600 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related
YP_004486406.1	TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: dac:Daci_5599 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase
YP_004486407.1	HAMAP: Phosphoglucose isomerase (PGI); KEGG: dac:Daci_5598 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI)
YP_004486408.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: dac:Daci_5597 SMP-30/gluconolaconase/LRE domain-containing protein
YP_004486409.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dac:Daci_5596 extracellular solute-binding protein
YP_004486410.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5595 binding-protein-dependent transport systems inner membrane component
YP_004486411.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5594 binding-protein-dependent transport systems inner membrane component
YP_004486412.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_5593 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486413.1	KEGG: dac:Daci_5592 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal
YP_004486414.1	KEGG: dac:Daci_5591 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004486415.1	KEGG: dac:Daci_5590 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486416.1	KEGG: dac:Daci_5589 class I cytochrome c; manually curated; PFAM: Cytochrome c, class I
YP_004486417.1	PFAM: ResB-like; KEGG: dac:Daci_5588 ResB family protein
YP_004486418.1	KEGG: dac:Daci_5587 cytochrome c-type biogenesis protein CcsB; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein
YP_004486419.1	KEGG: dac:Daci_5586 putative sulfite oxidase subunit YedY; HAMAP: Sulfoxide reductase catalytic subunit yedY; PFAM: Oxidoreductase, molybdopterin binding
YP_004486420.1	KEGG: dac:Daci_5585 ferric reductase domain-containing protein; HAMAP: Sulfoxide reductase heme-binding subunit yedZ; PFAM: Ferric reductase-like transmembrane component, N-terminal
YP_004486421.1	SMART: Beta-lactamase-like; KEGG: dac:Daci_5584 beta-lactamase domain-containing protein
YP_004486422.1	KEGG: dac:Daci_5583 iron donor protein CyaY; TIGRFAM: Frataxin-like; PFAM: Frataxin-like
YP_004486423.1	TIGRFAM: Penicillin-binding protein 1A; KEGG: dac:Daci_5582 1A family penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004486424.1	TIGRFAM: Type IV pilus assembly protein PilM; KEGG: dac:Daci_5581 type IV pilus assembly protein PilM
YP_004486425.1	PFAM: Fimbrial assembly; KEGG: dac:Daci_5580 fimbrial assembly family protein
YP_004486426.1	PFAM: Pilus assembly protein, PilO; KEGG: pop:POPTR_793408 hypothetical protein
YP_004486427.1	PFAM: Pilus assembly protein PilP; KEGG: dac:Daci_5578 pilus assembly protein PilP
YP_004486428.1	KEGG: dac:Daci_5577 type IV pilus secretin PilQ; TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; Secretin/TonB, short N-terminal; NolW-like
YP_004486429.1	KEGG: rcu:RCOM_2013410 hypothetical protein; manually curated; PFAM: Putative Ig
YP_004486430.1	HAMAP: Shikimate kinase; KEGG: dac:Daci_5575 shikimate kinase; PFAM: Shikimate kinase
YP_004486431.1	PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: dac:Daci_5574 3-dehydroquinate synthase
YP_004486432.1	SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: dac:Daci_5573 deoxyguanosinetriphosphate triphosphohydrolase-like protein; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain
YP_004486433.1	PFAM: Protein of unknown function DUF1415; KEGG: dac:Daci_5572 hypothetical protein
YP_004486434.1	KEGG: dac:Daci_5571 hypothetical protein
YP_004486435.1	KEGG: dac:Daci_5569 beta-lactamase domain-containing protein
YP_004486436.1	PFAM: Alkaline phosphatase; KEGG: dac:Daci_5568 alkaline phosphatase; SMART: Alkaline phosphatase
YP_004486437.1	KEGG: dac:Daci_5567 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase
YP_004486438.1	KEGG: dac:Daci_5566 putative signal peptide protein
YP_004486439.1	KEGG: dac:Daci_5565 hypothetical protein
YP_004486440.1	KEGG: dac:Daci_5564 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004486441.1	KEGG: dac:Daci_5563 beta-ketoadipyl CoA thiolase; TIGRFAM: Beta-ketoadipyl CoA thiolase; Thiolase
YP_004486442.1	SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: dac:Daci_5562 3-oxoacid CoA-transferase subunit B; PFAM: Coenzyme A transferase
YP_004486443.1	TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: dac:Daci_5561 3-oxoacid CoA-transferase subunit A; PFAM: Coenzyme A transferase
YP_004486444.1	TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; KEGG: dac:Daci_5560 IclR family transcriptional regulator; SMART: Transcriptional regulator IclR, N-terminal
YP_004486445.1	KEGG: dac:Daci_5559 hypothetical protein
YP_004486446.1	KEGG: dac:Daci_5558 glutamate synthase; PFAM: Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, central-C; Glutamate synthase, alpha subunit, C-terminal
YP_004486447.1	TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: dac:Daci_5557 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004486448.1	KEGG: dac:Daci_5556 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase
YP_004486449.1	KEGG: dac:Daci_5555 sec-independent translocase; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_004486450.1	TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: dac:Daci_5554 twin arginine translocase protein A; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_004486451.1	PFAM: Histidine triad (HIT) protein; KEGG: dac:Daci_5553 histidine triad (HIT) protein
YP_004486452.1	PFAM: Patatin; KEGG: dac:Daci_5552 patatin
YP_004486453.1	KEGG: dac:Daci_5551 putative transmembrane protein
YP_004486454.1	TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; KEGG: dac:Daci_5550 phosphoribosyl-ATP pyrophosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase
YP_004486455.1	HAMAP: Phosphoribosyl-AMP cyclohydrolase; KEGG: dac:Daci_5549 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_004486456.1	PFAM: Histidine biosynthesis; TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: dac:Daci_5548 imidazole glycerol phosphate synthase subunit HisF
YP_004486457.1	TIGRFAM: UDP-glucose 4-epimerase; KEGG: dac:Daci_5547 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004486458.1	PFAM: TM1410 hypothetical-related protein; KEGG: dac:Daci_5546 putative signal peptide protein
YP_004486459.1	KEGG: dac:Daci_5545 TPR repeat-containing protein
YP_004486460.1	KEGG: dac:Daci_5544 putative lipoprotein
YP_004486461.1	KEGG: dac:Daci_5543 putative transmembrane protein
YP_004486462.1	KEGG: dac:Daci_5542 putative transmembrane protein
YP_004486463.1	PFAM: Glycosyl transferase, group 1; KEGG: dac:Daci_5541 glycosyl transferase group 1 protein
YP_004486464.1	KEGG: dac:Daci_5540 putative transmembrane protein
YP_004486465.1	KEGG: dac:Daci_5539 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004486466.1	KEGG: dac:Daci_5538 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004486467.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5537 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486468.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5536 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486469.1	KEGG: dac:Daci_5535 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140
YP_004486470.1	PFAM: Mammalian cell entry related; KEGG: dac:Daci_5534 hypothetical protein
YP_004486471.1	PFAM: VacJ-like lipoprotein; KEGG: dac:Daci_5533 VacJ family lipoprotein
YP_004486472.1	PFAM: Toluene tolerance; KEGG: dac:Daci_5532 toluene tolerance family protein
YP_004486473.1	KEGG: dac:Daci_5531 sulfate transporter/antisigma-factor antagonist STAS
YP_004486474.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5530 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486475.1	PFAM: ABC-2 type transporter; KEGG: dac:Daci_5529 ABC-2 type transporter
YP_004486476.1	PFAM: BolA-like protein; KEGG: dac:Daci_5528 BolA family protein
YP_004486477.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: dac:Daci_5527 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core
YP_004486478.1	TIGRFAM: ATP phosphoribosyltransferase, catalytic region; KEGG: dac:Daci_5526 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region
YP_004486479.1	KEGG: dac:Daci_5525 hypothetical protein
YP_004486480.1	PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: dac:Daci_5524 histidinol dehydrogenase
YP_004486481.1	PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: dac:Daci_5521 histidinol-phosphate aminotransferase
YP_004486482.1	KEGG: dac:Daci_5520 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_004486483.1	TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: dac:Daci_5519 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004486484.1	TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: dac:Daci_5518 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis
YP_004486485.1	KEGG: dac:Daci_5517 hypothetical protein
YP_004486486.1	PFAM: Aldose 1-epimerase; KEGG: dac:Daci_5516 aldose 1-epimerase
YP_004486487.1	PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: dac:Daci_5515 2-alkenal reductase; SMART: PDZ/DHR/GLGF
YP_004486490.1	PFAM: General substrate transporter; KEGG: dac:Daci_5507 major facilitator transporter
YP_004486491.1	KEGG: dac:Daci_5506 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3
YP_004486492.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: dac:Daci_5505 4-hydroxythreonine-4-phosphate dehydrogenase
YP_004486493.1	KEGG: dac:Daci_5504 large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel
YP_004486494.1	TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; KEGG: dac:Daci_5503 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004486495.1	PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal; KEGG: dac:Daci_5502 cytochrome b/b6 domain-containing protein
YP_004486496.1	PFAM: Cytochrome c1; KEGG: dac:Daci_5501 cytochrome c1
YP_004486497.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_5500 glutathione S-transferase domain-containing protein
YP_004486498.1	PFAM: Stringent starvation protein B; KEGG: dac:Daci_5499 stringent starvation protein B
YP_004486499.1	KEGG: dac:Daci_5498 hypothetical protein
YP_004486500.1	TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: dac:Daci_5497 preprotein translocase subunit SecA; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif
YP_004486501.1	PFAM: Arginine biosynthesis protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; HAMAP: Arginine biosynthesis protein ArgJ; KEGG: dac:Daci_5496 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
YP_004486502.1	PFAM: Protein of unknown function DUF815; KEGG: dac:Daci_5495 hypothetical protein
YP_004486503.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_5494 NUDIX hydrolase
YP_004486504.1	KEGG: dac:Daci_5493 hypothetical protein; HAMAP: Uncharacterised protein family, zinc-binding; PFAM: Uncharacterised protein family, zinc-binding
YP_004486505.1	PFAM: Protein of unknown function DUF1342; KEGG: dac:Daci_5492 hypothetical protein
YP_004486506.1	TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: dac:Daci_5491 dephospho-CoA kinase
YP_004486507.1	KEGG: dac:Daci_5490 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV
YP_004486508.1	PFAM: Type II secretion system F domain; KEGG: dac:Daci_5489 type II secretion system protein
YP_004486509.1	TIGRFAM: ATPase, type IV, pilus assembly, PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: dac:Daci_5488 type IV-A pilus assembly ATPase PilB; SMART: ATPase, AAA+ type, core
YP_004486510.1	KEGG: dac:Daci_5487 polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004486511.1	KEGG: dac:Daci_5486 ribosomal protein L21; TIGRFAM: Ribosomal protein L21; PFAM: Ribosomal protein L21
YP_004486512.1	KEGG: dac:Daci_5485 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27
YP_004486513.1	KEGG: dac:Daci_5484 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related
YP_004486514.1	TIGRFAM: Glutamate 5-kinase, ProB-related; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; KEGG: dac:Daci_5483 gamma-glutamyl kinase; SMART: Pseudouridine synthase/archaeosine transglycosylase
YP_004486515.1	KEGG: dac:Daci_5482 dinucleoside polyphosphate hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain
YP_004486516.1	TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: dac:Daci_5481 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding
YP_004486517.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: dac:Daci_5480 lytic transglycosylase catalytic
YP_004486518.1	PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: dac:Daci_5479 hypothetical protein
YP_004486519.1	KEGG: dac:Daci_5478 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin
YP_004486520.1	KEGG: dac:Daci_5477 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small
YP_004486521.1	TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: dac:Daci_5476 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor
YP_004486522.1	manually curated; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: dac:Daci_5475 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal
YP_004486523.1	KEGG: dac:Daci_5474 hypothetical protein
YP_004486524.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5473 LysR family transcriptional regulator
YP_004486525.1	KEGG: dac:Daci_5472 hypothetical protein
YP_004486526.1	PFAM: N-formylglutamate amidohydrolase; KEGG: dac:Daci_5471 N-formylglutamate amidohydrolase
YP_004486527.1	PFAM: Mechanosensitive ion channel MscS; KEGG: dac:Daci_5470 MscS mechanosensitive ion channel
YP_004486528.1	KEGG: dac:Daci_5469 glycerophosphodiester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase
YP_004486529.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_5468 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486530.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5467 binding-protein-dependent transport systems inner membrane component
YP_004486531.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5466 binding-protein-dependent transport systems inner membrane component
YP_004486532.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dac:Daci_5465 extracellular solute-binding protein
YP_004486533.1	PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; KEGG: dac:Daci_5464 FAD linked oxidase domain-containing protein
YP_004486534.1	PFAM: Histidine triad (HIT) protein; KEGG: dac:Daci_5463 histidine triad (HIT) protein
YP_004486535.1	PFAM: Protein of unknown function DUF971; KEGG: dac:Daci_5462 hypothetical protein
YP_004486536.1	TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: dac:Daci_5461 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_004486537.1	PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: dac:Daci_5460 import inner membrane translocase subunit Tim44
YP_004486538.1	KEGG: dac:Daci_5459 hypothetical protein
YP_004486539.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; HAMAP: ubiquinone biosynthesis protein ubiB; KEGG: dac:Daci_5458 putative ubiquinone biosynthesis protein UbiB; PFAM: ABC-1
YP_004486540.1	PFAM: Sodium/solute symporter; KEGG: dac:Daci_5457 Na+/solute symporter
YP_004486541.1	KEGG: dac:Daci_5456 hypothetical protein
YP_004486542.1	TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: dac:Daci_5455 FmdB family regulatory protein; SMART: Regulatory protein, FmdB, putative
YP_004486543.1	PFAM: Protein of unknown function DUF502; KEGG: dac:Daci_5454 hypothetical protein
YP_004486544.1	TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: dac:Daci_5453 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain
YP_004486545.1	KEGG: dac:Daci_5452 hypothetical protein
YP_004486546.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_5451 NUDIX hydrolase
YP_004486547.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dac:Daci_5450 endonuclease/exonuclease/phosphatase
YP_004486548.1	KEGG: dac:Daci_5449 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_004486549.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_5448 hypothetical protein
YP_004486550.1	KEGG: dac:Daci_5447 hypothetical protein
YP_004486551.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_5446 lysine exporter protein LysE/YggA
YP_004486552.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_5445 esterase/lipase/thioesterase family protein
YP_004486553.1	KEGG: dac:Daci_5444 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486554.1	KEGG: dac:Daci_5443 hypothetical protein
YP_004486555.1	PFAM: Amidase; KEGG: dac:Daci_5442 amidase
YP_004486556.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dac:Daci_5441 extracellular solute-binding protein
YP_004486557.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dac:Daci_5440 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486558.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dac:Daci_5439 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004486559.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5438 binding-protein-dependent transport systems inner membrane component
YP_004486560.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5437 binding-protein-dependent transport systems inner membrane component
YP_004486561.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dac:Daci_5436 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
YP_004486562.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: dac:Daci_5435 peptidyl-tRNA hydrolase
YP_004486563.1	TIGRFAM: Ribosomal protein L25; HAMAP: 50S ribosomal protein L25; Ribosomal protein L25; KEGG: dac:Daci_5434 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25, N-terminal
YP_004486564.1	PFAM: Phosphoribosyltransferase; manually curated; KEGG: dac:Daci_5433 ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase
YP_004486565.1	PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: dac:Daci_5432 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
YP_004486566.1	PFAM: Outer membrane lipoprotein LolB; KEGG: dac:Daci_5431 outer membrane lipoprotein LolB
YP_004486567.1	KEGG: dac:Daci_5430 tetratricopeptide repeat-containing protein
YP_004486568.1	SMART: DNA glycosylase/AP lyase, catalytic domain; TIGRFAM: DNA glycosylase/AP lyase; KEGG: dac:Daci_5429 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain
YP_004486569.1	KEGG: dac:Daci_5428 hypothetical protein
YP_004486570.1	TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: dac:Daci_5427 A/G-specific adenine glycosylase; SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004486571.1	KEGG: dac:Daci_5426 hypothetical protein
YP_004486572.1	PFAM: Uncharacterised protein family, inner membrane CreD; KEGG: dac:Daci_5425 hypothetical protein
YP_004486573.1	KEGG: dac:Daci_5424 sensory histidine kinase CreC; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004486574.1	KEGG: dac:Daci_5423 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004486575.1	KEGG: dac:Daci_5422 hypothetical protein
YP_004486576.1	KEGG: dac:Daci_5421 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal
YP_004486577.1	KEGG: dac:Daci_5420 NAD(+)/NADH kinase family protein; PFAM: ATP-NAD/AcoX kinase
YP_004486578.1	TIGRFAM: Negative regulator of class I heat shock protein; HAMAP: Negative regulator of class I heat shock protein; KEGG: dac:Daci_5419 heat-inducible transcription repressor; PFAM: Negative regulator of class I heat shock protein
YP_004486579.1	KEGG: dac:Daci_5418 histidine kinase; PFAM: CHASE2; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004486580.1	KEGG: dac:Daci_5417 peptidoglycan-binding LysM; PFAM: FecR protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004486581.1	KEGG: dac:Daci_5416 two component transcriptional regulator; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004486582.1	TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: dac:Daci_5415 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib
YP_004486583.1	PFAM: Peptidase M50; KEGG: dac:Daci_5414 peptidase M50
YP_004486584.1	KEGG: dac:Daci_5413 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004486585.1	KEGG: dac:Daci_5412 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal
YP_004486586.1	KEGG: dac:Daci_5411 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004486587.1	KEGG: dac:Daci_5410 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004486588.1	PFAM: Protein of unknown function DUF799; KEGG: dac:Daci_5409 hypothetical protein
YP_004486589.1	KEGG: dac:Daci_5408 hypothetical protein
YP_004486590.1	PFAM: Curli production assembly/transport component CsgG; KEGG: dac:Daci_5407 curli production assembly/transport component CsgG
YP_004486591.1	KEGG: dac:Daci_5406 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1
YP_004486592.1	KEGG: dac:Daci_5405 hypothetical protein
YP_004486593.1	KEGG: dac:Daci_5404 sulfatase; PFAM: Sulfatase
YP_004486594.1	KEGG: dac:Daci_5403 hypothetical protein
YP_004486595.1	manually curated; PFAM: HTH transcriptional regulator, MarR; KEGG: dac:Daci_5402 transcriptional regulator TrmB; SMART: HTH transcriptional regulator, MarR
YP_004486596.1	KEGG: dac:Daci_5401 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted
YP_004486597.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: dac:Daci_5400 lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter-like
YP_004486598.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; PAS fold-4; KEGG: dac:Daci_5399 PAS/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling; PAC motif; PAS
YP_004486599.1	PFAM: Deoxyribonuclease, TatD-related; KEGG: dac:Daci_5398 TatD-related deoxyribonuclease
YP_004486600.1	KEGG: dac:Daci_5397 hypothetical protein
YP_004486601.1	KEGG: dac:Daci_5396 hypothetical protein
YP_004486602.1	KEGG: dac:Daci_5395 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core
YP_004486603.1	KEGG: dac:Daci_5394 hypothetical protein
YP_004486604.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: dac:Daci_5393 hypothetical protein
YP_004486605.1	KEGG: dac:Daci_5392 hypothetical protein
YP_004486606.1	KEGG: dac:Daci_5391 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004486607.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; KEGG: dac:Daci_5390 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004486608.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_5389 hypothetical protein
YP_004486609.1	KEGG: dac:Daci_5388 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004486610.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_5387 NUDIX hydrolase
YP_004486611.1	KEGG: dac:Daci_5386 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi co-transporter II-related; PFAM: Na/Pi-cotransporter; PhoU
YP_004486612.1	PFAM: Peptidase A8, signal peptidase II; TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: dac:Daci_5385 lipoprotein signal peptidase
YP_004486613.1	TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: dac:Daci_5384 isoleucyl-tRNA synthetase
YP_004486614.1	TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: dac:Daci_5383 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase
YP_004486615.1	KEGG: dac:Daci_5382 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_004486616.1	PFAM: Methyltransferase type 12; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: ajs:Ajs_3396 methyltransferase type 12
YP_004486617.1	PFAM: Methyltransferase type 12; KEGG: dac:Daci_5381 type 11 methyltransferase
YP_004486618.1	KEGG: dac:Daci_5380 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004486619.1	KEGG: dac:Daci_5379 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004486620.1	KEGG: dac:Daci_5378 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004486621.1	KEGG: dac:Daci_5377 hypothetical protein
YP_004486622.1	KEGG: dac:Daci_5376 hypothetical protein
YP_004486623.1	PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: dac:Daci_5375 acyl-CoA dehydrogenase domain-containing protein
YP_004486624.1	KEGG: dac:Daci_5374 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA oxidase/dehydrogenase, type 1
YP_004486625.1	KEGG: dac:Daci_5373 hypothetical protein; HAMAP: Protein of unknown function DUF480; PFAM: Protein of unknown function DUF480
YP_004486626.1	TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: dac:Daci_5372 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal
YP_004486627.1	PFAM: Protein of unknown function DUF1653; KEGG: dac:Daci_5371 hypothetical protein
YP_004486628.1	PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: dac:Daci_5370 Fmu (Sun) domain-containing protein
YP_004486629.1	PFAM: Fatty acid desaturase, type 1; KEGG: dac:Daci_5369 fatty acid desaturase
YP_004486630.1	KEGG: dac:Daci_5368 hypothetical protein
YP_004486631.1	KEGG: dac:Daci_5367 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004486632.1	KEGG: dac:Daci_5366 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33
YP_004486633.1	KEGG: dac:Daci_5365 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28
YP_004486634.1	TIGRFAM: Thioredoxin reductase; KEGG: dac:Daci_5364 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004486635.1	PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: dac:Daci_5363 cell divisionFtsK/SpoIIIE
YP_004486636.1	TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; KEGG: dac:Daci_5362 outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA
YP_004486637.1	KEGG: dac:Daci_5361 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004486638.1	KEGG: dac:Daci_5360 branched-chain amino acid transport system II carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein
YP_004486639.1	KEGG: dac:Daci_5359 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_004486640.1	PFAM: Helix-turn-helix, HxlR type; KEGG: dac:Daci_5358 HxlR family transcriptional regulator
YP_004486641.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_5357 short-chain dehydrogenase/reductase SDR
YP_004486642.1	PFAM: DSBA oxidoreductase; KEGG: dac:Daci_5356 DsbA oxidoreductase
YP_004486643.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: dac:Daci_5355 glutathione-dependent formaldehyde-activating GFA
YP_004486644.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_5354 inner-membrane translocator
YP_004486645.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_5353 inner-membrane translocator
YP_004486646.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5352 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486647.1	KEGG: dac:Daci_5351 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004486648.1	PFAM: Protein of unknown function DUF486; KEGG: dac:Daci_5350 hypothetical protein
YP_004486649.1	PFAM: Putitive phosphate transport regulator; KEGG: dac:Daci_5349 hypothetical protein
YP_004486650.1	PFAM: Phosphate transporter; KEGG: dac:Daci_5348 phosphate transporter
YP_004486651.1	KEGG: dac:Daci_5347 hypothetical protein
YP_004486652.1	KEGG: dac:Daci_5346 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004486653.1	KEGG: dac:Daci_5345 ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16
YP_004486654.1	TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: dac:Daci_5344 16S rRNA-processing protein RimM; PFAM: RimM protein; PRC-barrel
YP_004486655.1	PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: dac:Daci_5343 tRNA (guanine-N(1)-)-methyltransferase
YP_004486656.1	TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: dac:Daci_5342 ribosomal protein L19; PFAM: Ribosomal protein L19
YP_004486657.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_5341 NUDIX hydrolase
YP_004486658.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiB; KEGG: dac:Daci_5340 cobalamin biosynthesis protein CbiB
YP_004486659.1	TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: dac:Daci_5339 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC
YP_004486660.1	KEGG: dac:Daci_5338 transcriptional coactivator/pterin dehydratase; HAMAP: pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase
YP_004486661.1	KEGG: dac:Daci_5337 STE24 endopeptidase; PFAM: Peptidase M48, Ste24p
YP_004486662.1	HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: ctt:CtCNB1_0907 exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease
YP_004486663.1	KEGG: dac:Daci_5336 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004486664.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_5335 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004486665.1	KEGG: dac:Daci_5334 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004486666.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: dac:Daci_5333 TRAP dicarboxylate transporter subunit DctP
YP_004486667.1	PFAM: IMP dehydrogenase/GMP reductase; TIGRFAM: Guanosine monophosphate reductase 2; HAMAP: GMP reductase; KEGG: dac:Daci_5332 guanosine 5'-monophosphate oxidoreductase
YP_004486668.1	PFAM: DNA helicase, UvrD/REP type; KEGG: dac:Daci_5331 UvrD/REP helicase
YP_004486669.1	KEGG: dac:Daci_5330 hypothetical protein
YP_004486670.1	PFAM: Protein of unknown function DUF839, bacterial; KEGG: dac:Daci_5329 putative exported alkaline phosphatase
YP_004486671.1	KEGG: dac:Daci_5328 hypothetical protein
YP_004486672.1	PFAM: Aminoglycoside phosphotransferase; TIGRFAM: Homoserine kinase ThrB; HAMAP: Homoserine kinase; KEGG: dac:Daci_5327 homoserine kinase
YP_004486673.1	KEGG: dac:Daci_5326 hypothetical protein
YP_004486674.1	SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; TIGRFAM: DNA polymerase 1; KEGG: dac:Daci_5325 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease
YP_004486675.1	KEGG: dac:Daci_5324 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase
YP_004486676.1	PFAM: Zinc/iron permease; KEGG: dac:Daci_5323 zinc/iron permease
YP_004486677.1	KEGG: dac:Daci_5322 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004486678.1	KEGG: dac:Daci_5321 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; Cache, type 2; SMART: ATP-binding region, ATPase-like
YP_004486679.1	KEGG: dac:Daci_5320 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP
YP_004486680.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: dac:Daci_5319 class V aminotransferase
YP_004486681.1	KEGG: dac:Daci_5318 LytTR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; LytTr DNA-binding region
YP_004486682.1	PFAM: Signal transduction histidine kinase, internal region; ATP-binding region, ATPase-like; KEGG: dac:Daci_5317 histidine kinase internal region
YP_004486683.1	TIGRFAM: Argininosuccinate lyase; KEGG: dac:Daci_5316 argininosuccinate lyase; PFAM: Fumarate lyase
YP_004486684.1	KEGG: dac:Daci_5315 hypothetical protein
YP_004486685.1	PFAM: Peptidase S54, rhomboid; KEGG: dac:Daci_5314 rhomboid family protein
YP_004486686.1	KEGG: dac:Daci_5313 hypothetical protein
YP_004486687.1	PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; Alpha-2-macroglobulin; KEGG: dac:Daci_5312 alpha-2-macroglobulin domain-containing protein
YP_004486688.1	KEGG: dac:Daci_5311 hypothetical protein
YP_004486689.1	KEGG: prw:PsycPRwf_0062 hypothetical protein
YP_004486690.1	KEGG: dac:Daci_5310 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter
YP_004486691.1	KEGG: dac:Daci_5309 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486692.1	PFAM: Amidase; KEGG: dac:Daci_5308 amidase
YP_004486693.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_5307 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486694.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dac:Daci_5306 extracellular solute-binding protein
YP_004486695.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5305 binding-protein-dependent transport systems inner membrane component
YP_004486696.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5304 binding-protein-dependent transport systems inner membrane component
YP_004486697.1	KEGG: dac:Daci_5303 hypothetical protein
YP_004486698.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dac:Daci_5302 endonuclease/exonuclease/phosphatase
YP_004486699.1	KEGG: dac:Daci_5301 hypothetical protein
YP_004486700.1	TIGRFAM: Penicillin-binding protein 1C; KEGG: dac:Daci_5300 penicillin-binding protein 1C; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal
YP_004486701.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5299 TetR family transcriptional regulator
YP_004486702.1	KEGG: dac:Daci_5298 hypothetical protein
YP_004486703.1	PFAM: Cupin 2, conserved barrel; KEGG: dac:Daci_5297 cupin 2 domain-containing protein
YP_004486704.1	KEGG: dac:Daci_5296 MarR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase; HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004486705.1	KEGG: dac:Daci_5295 L-lactate transport; TIGRFAM: L-lactate permease; PFAM: L-lactate permease
YP_004486706.1	KEGG: dac:Daci_5294 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004486707.1	KEGG: dac:Daci_5293 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004486708.1	SMART: Helix-turn-helix, AraC domain; KEGG: dac:Daci_5292 AraC family transcriptional regulator
YP_004486709.1	KEGG: dac:Daci_5291 hypothetical protein
YP_004486710.1	KEGG: dac:Daci_5290 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004486711.1	PFAM: Anti-sigma K factor RskA; KEGG: dac:Daci_5289 putative transmembrane protein
YP_004486712.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_5288 hypothetical protein
YP_004486713.1	HAMAP: DNA polymerase IV; KEGG: dac:Daci_5287 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like
YP_004486714.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: dac:Daci_5286 PAS/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004486715.1	PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD; HAMAP: Nitrile oxidoreductase, NADPH-dependent, YqcD; KEGG: dac:Daci_5285 7-cyano-7-deazaguanine reductase
YP_004486716.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dac:Daci_5284 procollagen-proline dioxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit
YP_004486717.1	KEGG: dac:Daci_5283 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328
YP_004486718.1	KEGG: dac:Daci_5282 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain
YP_004486720.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: dac:Daci_5281 RluA family pseudouridine synthase; SMART: RNA-binding S4
YP_004486721.1	KEGG: dac:Daci_5280 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_004486722.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dac:Daci_5279 Rieske (2Fe-2S) domain-containing protein
YP_004486723.1	PFAM: Peptidase S49; KEGG: dac:Daci_5278 peptidase S49
YP_004486724.1	KEGG: dac:Daci_5277 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_004486725.1	TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: dac:Daci_5276 maf protein; PFAM: Maf-like protein
YP_004486726.1	PFAM: Protein of unknown function DUF177; KEGG: dac:Daci_5275 hypothetical protein
YP_004486727.1	TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: dac:Daci_5274 50S ribosomal protein L32; PFAM: Ribosomal protein L32p
YP_004486728.1	PFAM: Fatty acid synthesis plsX protein; manually curated; TIGRFAM: Phospholipid biosynthesis protein, PlsX like; KEGG: dac:Daci_5273 putative glycerol-3-phosphate acyltransferase PlsX; HAMAP: Phospholipid biosynthesis protein, PlsX like
YP_004486729.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: dac:Daci_5272 3-oxoacyl-(acyl carrier protein) synthase III
YP_004486730.1	TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: dac:Daci_5271 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase
YP_004486731.1	KEGG: dac:Daci_5270 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004486732.1	TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: acyl carrier protein; PFAM: Phosphopantetheine-binding
YP_004486733.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: dac:Daci_5268 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004486734.1	manually curated; KEGG: ctt:CtCNB1_0975 hypothetical protein
YP_004486735.1	KEGG: dac:Daci_5267 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004486736.1	PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: dac:Daci_5266 anti sigma-E protein RseA
YP_004486737.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: dac:Daci_5265 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_004486738.1	TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: dac:Daci_5264 GTP-binding protein LepA; SMART: Translation elongation factor EFG/EF2, C-terminal
YP_004486739.1	KEGG: dac:Daci_5263 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region
YP_004486740.1	KEGG: dac:Daci_5262 putative transmembrane protein
YP_004486741.1	KEGG: dac:Daci_5261 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding
YP_004486742.1	KEGG: dac:Daci_5260 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2
YP_004486743.1	KEGG: dac:Daci_5259 DNA repair protein RecO; TIGRFAM: Recombination protein O, RecO; PFAM: Recombination protein O, RecO
YP_004486744.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: dac:Daci_5258 pyridoxine 5'-phosphate synthase
YP_004486745.1	TIGRFAM: Phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: dac:Daci_5257 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase
YP_004486746.1	PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: dac:Daci_5256 beta-N-acetylhexosaminidase
YP_004486747.1	HAMAP: 6-phosphofructokinase; KEGG: dac:Daci_5255 6-phosphofructokinase; PFAM: Phosphofructokinase
YP_004486748.1	KEGG: dac:Daci_5254 cold-shock DNA-binding domain-containing protein; PFAM: Protein of unknown function DUF1294; Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004486749.1	KEGG: dac:Daci_5253 hypothetical protein
YP_004486750.1	PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: dac:Daci_5252 phosphoribosylglycinamide formyltransferase 2
YP_004486751.1	KEGG: dac:Daci_5251 small-conductance mechanosensitive channel-like protein; manually curated; PFAM: Mechanosensitive ion channel MscS
YP_004486752.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: dac:Daci_5250 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_004486753.1	KEGG: dac:Daci_5249 transmembrane prediction
YP_004486754.1	PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: dac:Daci_5248 lysyl-tRNA synthetase
YP_004486755.1	KEGG: dac:Daci_5247 peptidase S16 lon domain-containing protein; PFAM: Peptidase S16, lon N-terminal; SMART: Peptidase S16, lon N-terminal
YP_004486756.1	PFAM: Protein of unknown function YGGT; KEGG: dac:Daci_5246 hypothetical protein
YP_004486757.1	PFAM: Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: dac:Daci_5245 acetyl-CoA carboxylase, carboxyl transferase subunit beta
YP_004486758.1	PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: dac:Daci_5244 tryptophan synthase subunit alpha
YP_004486759.1	TIGRFAM: Tryptophan synthase, beta chain; KEGG: dac:Daci_5243 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004486760.1	KEGG: dac:Daci_5242 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_004486761.1	TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: dac:Daci_5241 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_004486762.1	TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: dac:Daci_5240 putative transmembrane protein
YP_004486763.1	TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria; KEGG: dac:Daci_5239 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding
YP_004486764.1	TIGRFAM: Isopropylmalate dehydrogenase; KEGG: dac:Daci_5238 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004486765.1	KEGG: dac:Daci_5237 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004486766.1	PFAM: Entericidin EcnAB; KEGG: dac:Daci_5236 entericidin EcnAB
YP_004486767.1	TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: dac:Daci_5235 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004486768.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5234 LysR family transcriptional regulator
YP_004486769.1	KEGG: dac:Daci_5233 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_004486770.1	SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: dac:Daci_5232 chaperone protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; Heat shock protein DnaJ, N-terminal
YP_004486771.1	TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: dac:Daci_5231 molecular chaperone DnaK; PFAM: Heat shock protein 70
YP_004486772.1	KEGG: dac:Daci_5230 heat shock protein GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor
YP_004486773.1	KEGG: dac:Daci_5229 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like
YP_004486774.1	KEGG: dac:Daci_5228 putative primosomal replication protein
YP_004486775.1	KEGG: dac:Daci_5227 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; PFAM: Ribosomal protein S18
YP_004486776.1	TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: dac:Daci_5226 ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal
YP_004486777.1	TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: dac:Daci_5225 replicative DNA helicase; SMART: ATPase, AAA+ type, core
YP_004486778.1	KEGG: dac:Daci_5224 hypothetical protein
YP_004486779.1	KEGG: dac:Daci_5223 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc
YP_004486780.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dac:Daci_5222 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004486781.1	PFAM: Protein of unknown function DUF498; KEGG: dac:Daci_5221 hypothetical protein
YP_004486782.1	KEGG: dac:Daci_5220 aminotransferase AlaT; PFAM: Aminotransferase, class I/II
YP_004486783.1	KEGG: dac:Daci_5219 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT
YP_004486784.1	TIGRFAM: Threonine synthase; KEGG: dac:Daci_5218 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004486785.1	KEGG: dac:Daci_5217 molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; PFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region
YP_004486786.1	KEGG: dac:Daci_5216 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV
YP_004486787.1	KEGG: dac:Daci_5215 molybdopterin converting factor subunit 1; TIGRFAM: Molybdopterin converting factor, subunit 1; MoaD, archaeal; PFAM: ThiamineS
YP_004486788.1	KEGG: dac:Daci_5214 hypothetical protein
YP_004486789.1	HAMAP: Dihydrodipicolinate synthase; KEGG: dac:Daci_5213 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase
YP_004486790.1	KEGG: dac:Daci_5212 hypothetical protein
YP_004486791.1	KEGG: dac:Daci_5211 hypothetical protein
YP_004486792.1	PFAM: Molybdopterin biosynthesis MoaE; KEGG: dac:Daci_5210 molybdopterin biosynthesis MoaE protein
YP_004486793.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_5209 hypothetical protein
YP_004486794.1	KEGG: dac:Daci_5208 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486795.1	TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: dac:Daci_5207 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core
YP_004486796.1	KEGG: dac:Daci_5206 hypothetical protein
YP_004486797.1	KEGG: dac:Daci_5205 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004486798.1	KEGG: dac:Daci_5204 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase
YP_004486799.1	PFAM: Methyltransferase type 11; KEGG: dac:Daci_5203 methyltransferase small
YP_004486800.1	KEGG: dac:Daci_5202 hypothetical protein
YP_004486801.1	KEGG: dac:Daci_5201 dihydrouridine synthase DuS; manually curated; PFAM: tRNA-dihydrouridine synthase
YP_004486802.1	KEGG: dac:Daci_5200 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase
YP_004486803.1	TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: dac:Daci_5199 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding
YP_004486804.1	KEGG: dac:Daci_5198 fimbrial protein pilin
YP_004486805.1	PFAM: Neisseria PilC; KEGG: pna:Pnap_2913 type 4 fimbrial biogenesis protein PilY1
YP_004486806.1	KEGG: hypothetical protein
YP_004486807.1	KEGG: ctt:CtCNB1_1052 prepilin-type cleavage/methylation-like protein
YP_004486808.1	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: type IV pilus modification protein PilV
YP_004486809.1	KEGG: dac:Daci_5193 N-terminal methylation site-containing protein
YP_004486810.1	KEGG: dac:Daci_5192 fimbrial protein pilin
YP_004486811.1	PFAM: FG-GAP; KEGG: dac:Daci_5191 FG-GAP repeat-containing protein
YP_004486812.1	KEGG: dac:Daci_5190 hypothetical protein
YP_004486813.1	KEGG: dac:Daci_5189 hypothetical protein
YP_004486814.1	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: dac:Daci_5188 type IV pilus modification protein PilV
YP_004486815.1	KEGG: dac:Daci_5187 putative type-4 fimbrial pilin related signal peptide protein
YP_004486816.1	KEGG: dac:Daci_5186 hypothetical protein
YP_004486817.1	KEGG: dac:Daci_5185 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15
YP_004486818.1	PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: dac:Daci_5184 polynucleotide phosphorylase/polyadenylase
YP_004486819.1	TIGRFAM: Quinone oxidoreductase putative, PIG3; KEGG: dac:Daci_5183 PIG3 family NAD(P)H quinone oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004486820.1	TIGRFAM: Triosephosphate isomerase; KEGG: dac:Daci_5182 triosephosphate isomerase; PFAM: Triosephosphate isomerase
YP_004486821.1	KEGG: dac:Daci_5181 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_004486822.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: dac:Daci_5180 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
YP_004486823.1	TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; KEGG: dac:Daci_5179 NADH dehydrogenase subunit B; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
YP_004486824.1	KEGG: dac:Daci_5178 NADH (or F420H2) dehydrogenase subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit
YP_004486825.1	PFAM: NADH-quinone oxidoreductase, subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; KEGG: dac:Daci_5177 NADH dehydrogenase subunit D
YP_004486826.1	TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: dac:Daci_5176 NADH-quinone oxidoreductase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit
YP_004486827.1	TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: dac:Daci_5175 NADH-quinone oxidoreductase subunit F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004486828.1	TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: dac:Daci_5174 NADH dehydrogenase subunit G; PFAM: Molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin
YP_004486829.1	HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; KEGG: dac:Daci_5173 NADH dehydrogenase; PFAM: NADH:ubiquinone oxidoreductase, subunit 1
YP_004486830.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: dac:Daci_5172 NADH dehydrogenase subunit I; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004486831.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: dac:Daci_5171 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
YP_004486832.1	PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: dac:Daci_5170 NADH-ubiquinone oxidoreductase subunit 4L
YP_004486833.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; manually curated; KEGG: dac:Daci_5169 proton-translocating NADH-quinone oxidoreductase subunit L; TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5
YP_004486834.1	TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: dac:Daci_5168 proton-translocating NADH-quinone oxidoreductase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004486835.1	TIGRFAM: NADH-quinone oxidoreductase, chain N; KEGG: dac:Daci_5167 NADH dehydrogenase subunit N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004486836.1	KEGG: dac:Daci_5166 putative transmembrane protein
YP_004486837.1	PFAM: Protein of unknown function DUF1178; KEGG: dac:Daci_5165 hypothetical protein
YP_004486838.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5164 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486839.1	KEGG: dac:Daci_5163 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004486840.1	KEGG: dac:Daci_5162 putative substrate-binding periplasmic (pbp) ABC transporter protein
YP_004486841.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_5161 inner-membrane translocator
YP_004486842.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_5160 inner-membrane translocator
YP_004486843.1	PFAM: Plasmid stabilisation system; KEGG: dac:Daci_5159 plasmid stabilization system protein
YP_004486844.1	KEGG: dac:Daci_5158 CopG/Arc/MetJ family addiction module antidote protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985
YP_004486845.1	PFAM: Protein of unknown function DUF2006; KEGG: dac:Daci_5157 secreted hydrolase-like protein
YP_004486846.1	KEGG: dac:Daci_5156 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004486847.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dac:Daci_5155 hypothetical protein
YP_004486848.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5154 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004486849.1	PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: dac:Daci_5153 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase
YP_004486850.1	KEGG: dac:Daci_5152 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004486851.1	PFAM: Rhodanese-like; KEGG: dac:Daci_5151 rhodanese domain-containing protein; SMART: Rhodanese-like
YP_004486852.1	PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: dac:Daci_5150 hypothetical protein
YP_004486853.1	KEGG: dac:Daci_5149 ankyrin
YP_004486854.1	KEGG: dac:Daci_5148 hypothetical protein
YP_004486855.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_5147 hypothetical protein
YP_004486856.1	KEGG: dac:Daci_5146 hypothetical protein
YP_004486857.1	KEGG: dac:Daci_5145 6-aminohexanoate-dimer hydrolase; PFAM: Beta-lactamase-related
YP_004486858.1	PFAM: Putative Ig; KEGG: pop:POPTR_590632 hypothetical protein
YP_004486859.1	KEGG: dac:Daci_5140 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region
YP_004486860.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5139 LysR family transcriptional regulator
YP_004486861.1	KEGG: dac:Daci_5138 alpha/beta hydrolase domain-containing protein
YP_004486862.1	KEGG: dac:Daci_5137 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004486863.1	KEGG: dac:Daci_5136 hydrophobe/amphiphile efflux-1 family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004486864.1	KEGG: dac:Daci_5135 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004486865.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5134 LysR family transcriptional regulator
YP_004486866.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dac:Daci_5133 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004486867.1	KEGG: dac:Daci_5132 hypothetical protein
YP_004486868.1	TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: dac:Daci_5131 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like
YP_004486869.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: dac:Daci_5130 17 kDa surface antigen
YP_004486870.1	PFAM: SNARE associated Golgi protein; KEGG: dac:Daci_5129 SNARE associated Golgi protein
YP_004486871.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: dac:Daci_5128 17 kDa surface antigen
YP_004486872.1	KEGG: dac:Daci_5127 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic
YP_004486873.1	KEGG: dac:Daci_5126 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria
YP_004486874.1	KEGG: dac:Daci_5125 iron-sulfur cluster-binding protein; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004486875.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; PAS fold-4; KEGG: dac:Daci_5124 PAS/PAC sensor-containing diguanylate cyclase; SMART: Diguanylate cyclase, predicted; PAS; PAC motif
YP_004486876.1	KEGG: dac:Daci_5123 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486877.1	TIGRFAM: Putative agmatinase; KEGG: dac:Daci_5122 agmatinase; PFAM: Ureohydrolase
YP_004486878.1	PFAM: Sodium/solute symporter; KEGG: dac:Daci_5121 Na+/solute symporter
YP_004486879.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5120 LysR family transcriptional regulator
YP_004486880.1	PFAM: Auxin efflux carrier; KEGG: dac:Daci_5119 auxin efflux carrier
YP_004486881.1	KEGG: dac:Daci_5118 hypothetical protein
YP_004486882.1	KEGG: dac:Daci_5117 tyrosine recombinase XerD; TIGRFAM: Tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004486883.1	KEGG: dac:Daci_5116 hypothetical protein
YP_004486884.1	KEGG: dac:Daci_5115 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted
YP_004486885.1	KEGG: dac:Daci_5114 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, predicted
YP_004486886.1	PFAM: Protein of unknown function DUF455; KEGG: dac:Daci_5113 hypothetical protein
YP_004486887.1	KEGG: dac:Daci_5112 hexapaptide repeat-containing transferase
YP_004486888.1	PFAM: Heat shock protein Hsp33 protein; KEGG: dac:Daci_5111 HSP33 protein
YP_004486889.1	KEGG: dac:Daci_5110 hypothetical protein
YP_004486890.1	PFAM: Septum formation initiator; KEGG: dac:Daci_5109 septum formation initiator
YP_004486891.1	PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: dac:Daci_5108 phosphopyruvate hydratase
YP_004486892.1	PFAM: Protein of unknown function DUF1330; KEGG: dac:Daci_5107 hypothetical protein
YP_004486893.1	PFAM: DAHP synthetase I/KDSA; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; KEGG: dac:Daci_5106 2-dehydro-3-deoxyphosphooctonate aldolase
YP_004486894.1	TIGRFAM: CTP synthase; KEGG: dac:Daci_5105 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004486895.1	TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: dac:Daci_5104 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: Flavoprotein; DNA/pantothenate metabolism flavoprotein, C-terminal
YP_004486896.1	KEGG: dac:Daci_5103 hypothetical protein
YP_004486897.1	PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: dac:Daci_5102 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
YP_004486898.1	KEGG: dac:Daci_5101 hypothetical protein
YP_004486899.1	KEGG: dac:Daci_5100 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like
YP_004486900.1	KEGG: dac:Daci_5099 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004486901.1	KEGG: dac:Daci_5098 membrane protein
YP_004486902.1	KEGG: dac:Daci_5097 hypothetical protein
YP_004486903.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: dac:Daci_5096 17 kDa surface antigen
YP_004486904.1	KEGG: dac:Daci_5095 fkbp-type peptidyl-prolyl cis-trans isomerase
YP_004486905.1	KEGG: dac:Daci_5094 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004486906.1	KEGG: dac:Daci_5093 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004486907.1	KEGG: dac:Daci_5092 cupin 4 family protein; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase
YP_004486908.1	manually curated; KEGG: dac:Daci_5091 hypothetical protein
YP_004486909.1	PFAM: NlpBDapX lipoprotein; KEGG: dac:Daci_5090 NlpB/DapX family lipoprotein
YP_004486910.1	KEGG: dac:Daci_5089 dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; PFAM: Dihydrodipicolinate synthetase
YP_004486911.1	PFAM: Methyltransferase type 11; KEGG: dac:Daci_5088 type 11 methyltransferase
YP_004486912.1	KEGG: dac:Daci_5087 hypothetical protein
YP_004486913.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_5086 major facilitator transporter
YP_004486914.1	PFAM: DNA topoisomerase, type IIA, subunit B, region 2; DNA topoisomerase, type IIA, subunit B, C-terminal; ATP-binding region, ATPase-like; KEGG: dac:Daci_5085 DNA topoisomerase IV subunit B; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like
YP_004486915.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: dac:Daci_5084 lytic transglycosylase catalytic
YP_004486916.1	SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; KEGG: dac:Daci_5083 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004486917.1	KEGG: dac:Daci_5082 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004486918.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_5081 endoribonuclease L-PSP
YP_004486919.1	KEGG: dac:Daci_5080 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein
YP_004486920.1	PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: dac:Daci_5079 hypothetical protein
YP_004486921.1	PFAM: Protein of unknown function DUF403, bacteria; KEGG: dac:Daci_5078 hypothetical protein
YP_004486922.1	KEGG: dac:Daci_5077 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase
YP_004486923.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_5076 major facilitator transporter
YP_004486924.1	KEGG: dac:Daci_5075 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004486925.1	KEGG: dac:Daci_5074 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004486926.1	KEGG: dac:Daci_5073 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_004486927.1	TIGRFAM: Peroxiredoxin; KEGG: dac:Daci_5072 alkyl hydroperoxide reductase subunit C; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal
YP_004486928.1	TIGRFAM: Alkyl hydroperoxide reductase, subunit F; KEGG: dac:Daci_5071 alkyl hydroperoxide reductase subunit F; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004486929.1	KEGG: dac:Daci_5070 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TIGRFAM: TonB-dependent haemoglobin/transferrin/lactoferrin receptor; TonB-dependent haem/haemoglobin receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004486930.1	KEGG: dac:Daci_5069 hypothetical protein
YP_004486931.1	PFAM: Haemin-degrading; KEGG: dac:Daci_5068 hemin-degrading family protein
YP_004486932.1	KEGG: dac:Daci_5067 hypothetical protein
YP_004486933.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5066 LysR family transcriptional regulator
YP_004486934.1	PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; KEGG: dac:Daci_5065 hypothetical protein
YP_004486935.1	TIGRFAM: Phosphoenolpyruvate synthase; KEGG: dac:Daci_5064 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme; PEP-utilising enzyme, mobile region
YP_004486936.1	TIGRFAM: Probable solute:sodium symporter, small subunit; KEGG: dac:Daci_5063 hypothetical protein
YP_004486937.1	KEGG: dac:Daci_5062 Na+/solute symporter; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; PFAM: Sodium/solute symporter
YP_004486938.1	KEGG: dac:Daci_5061 hypothetical protein
YP_004486939.1	KEGG: dac:Daci_5060 FKBP-type peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004486940.1	KEGG: dac:Daci_5059 putative transcriptional regulator
YP_004486941.1	KEGG: dac:Daci_5058 hypothetical protein
YP_004486942.1	KEGG: ctt:CtCNB1_1957 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004486943.1	PFAM: FecR protein; KEGG: mms:mma_0755 Fe2+-dicitrate sensor, membrane component
YP_004486944.1	KEGG: mms:mma_0754 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004486945.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_5057 PepSY-associated TM helix domain-containing protein
YP_004486946.1	PFAM: Uncharacterised conserved protein UCP014995; KEGG: dac:Daci_5056 hypothetical protein
YP_004486947.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dac:Daci_5055 hypothetical protein
YP_004486948.1	PFAM: ApbE-like lipoprotein; KEGG: dac:Daci_5054 ApbE family lipoprotein
YP_004486949.1	PFAM: Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding; KEGG: dac:Daci_5053 flavodoxin/nitric oxide synthase
YP_004486950.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_5052 TonB-dependent receptor
YP_004486951.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: dac:Daci_5051 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal
YP_004486952.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: dac:Daci_5050 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004486953.1	TIGRFAM: 4-aminobutyrate aminotransferase, bacterial; KEGG: dac:Daci_5049 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III
YP_004486954.1	KEGG: dac:Daci_5048 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004486955.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_5047 GCN5-related N-acetyltransferase
YP_004486956.1	PFAM: Adenylate cyclase; KEGG: dac:Daci_5046 adenylate cyclase
YP_004486957.1	KEGG: dac:Daci_5045 RNA polymerase sigma 70 subunit RpoD; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_004486958.1	KEGG: dac:Daci_5044 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain
YP_004486959.1	KEGG: dac:Daci_5043 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like
YP_004486960.1	KEGG: dac:Daci_5042 two component transcriptional regulator; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver region
YP_004486961.1	PFAM: Band 7 protein; KEGG: dac:Daci_5041 band 7 protein
YP_004486962.1	KEGG: dac:Daci_5040 hypothetical protein
YP_004486963.1	KEGG: dac:Daci_5039 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004486964.1	PFAM: Small multidrug resistance protein; KEGG: dac:Daci_5038 small multidrug resistance protein
YP_004486965.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: pop:POPTR_588331 hypothetical protein; PFAM: Peptidase M24, structural domain
YP_004486966.1	KEGG: dac:Daci_5036 hypothetical protein
YP_004486967.1	KEGG: dac:Daci_5035 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004486968.1	KEGG: dac:Daci_5034 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase
YP_004486969.1	KEGG: dac:Daci_5033 sodium/glutamate symporter; TIGRFAM: Sodium/glutamate symporter; PFAM: Sodium/glutamate symporter
YP_004486970.1	KEGG: dac:Daci_5032 alkaline phosphatase; PFAM: Alkaline phosphatase D-related
YP_004486971.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_5031 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004486972.1	KEGG: dac:Daci_5030 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004486973.1	PFAM: Survival protein SurE-like phosphatase/nucleotidase; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: dac:Daci_5029 stationary phase survival protein SurE
YP_004486974.1	TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: dac:Daci_5028 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004486975.1	KEGG: dac:Daci_5027 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004486976.1	KEGG: dac:Daci_5026 RluA family pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4
YP_004486977.1	KEGG: dac:Daci_5025 segregation and condensation protein B; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote
YP_004486978.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: dac:Daci_5024 pseudouridine synthase; SMART: RNA-binding S4
YP_004486979.1	PFAM: Nucleoside diphosphate kinase, core; KEGG: dac:Daci_5023 nucleoside diphosphate kinase; SMART: Nucleoside diphosphate kinase, core
YP_004486980.1	TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: dac:Daci_5022 radical SAM protein; PFAM: Radical SAM
YP_004486981.1	KEGG: dac:Daci_5021 type IV pilus biogenesis/stability protein PilW; TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1
YP_004486982.1	KEGG: dac:Daci_5020 hypothetical protein
YP_004486983.1	TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: dac:Daci_5019 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
YP_004486984.1	KEGG: dac:Daci_5018 histidyl-tRNA synthetase; manually curated; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup
YP_004486985.1	PFAM: Protein of unknown function DUF2133; KEGG: dac:Daci_5017 hypothetical protein
YP_004486986.1	TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; KEGG: dac:Daci_5016 outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat
YP_004486987.1	KEGG: dac:Daci_5015 GTP-binding protein EngA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related
YP_004486988.1	TIGRFAM: Host factor Hfq; HAMAP: Protein hfq; KEGG: dac:Daci_5014 RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core
YP_004486989.1	KEGG: dac:Daci_5013 GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related
YP_004486990.1	TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: dac:Daci_5012 HflK protein; SMART: Band 7 protein
YP_004486991.1	TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: dac:Daci_5011 HflC protein; SMART: Band 7 protein
YP_004486992.1	TIGRFAM: Histidyl-tRNA synthetase, class IIa, putative; HAMAP: ATP phosphoribosyltransferase regulatory subunit; KEGG: dac:Daci_5010 tRNA synthetase class II (G H P and S); PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region
YP_004486993.1	SMART: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; KEGG: dac:Daci_5009 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase
YP_004486994.1	PFAM: Phosphoribosyltransferase; KEGG: dac:Daci_5008 phosphoribosyltransferase
YP_004486995.1	KEGG: dac:Daci_5007 YVTN beta-propeller repeat-containing protein
YP_004486996.1	PFAM: Polysaccharide deacetylase; KEGG: dac:Daci_5006 polysaccharide deacetylase
YP_004486997.1	PFAM: Fatty acid hydroxylase; KEGG: dac:Daci_5005 fatty acid hydroxylase
YP_004486998.1	KEGG: dac:Daci_5004 putative transmembrane protein
YP_004486999.1	PFAM: Molybdopterin binding; KEGG: dac:Daci_5003 molybdopterin-binding domain-containing protein
YP_004487000.1	TIGRFAM: Glutamine synthetase type I; KEGG: dac:Daci_5002 type I glutamine synthetase; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp
YP_004487001.1	KEGG: dac:Daci_5001 putative signal peptide protein
YP_004487002.1	KEGG: dac:Daci_5000 signal transduction histidine kinase NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS
YP_004487003.1	TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I); PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: dac:Daci_4999 nitrogen metabolism transcriptional regulator NtrC; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004487004.1	manually curated; KEGG: dac:Daci_4998 hypothetical protein
YP_004487005.1	TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: dac:Daci_4997 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_004487006.1	KEGG: dar:Daro_2544 hypothetical protein
YP_004487007.1	KEGG: bmj:BMULJ_03737 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004487008.1	KEGG: pna:Pnap_4622 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004487009.1	KEGG: bja:blr6378 transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004487010.1	KEGG: axy:AXYL_03089 Tat pathway signal sequence domain-containing protein 13
YP_004487011.1	PFAM: MmgE/PrpD; KEGG: bxe:Bxe_B1004 putative MmgE/PRP family protein
YP_004487012.1	PFAM: MaoC-like dehydratase; KEGG: vei:Veis_1584 dehydratase
YP_004487013.1	KEGG: rme:Rmet_4427 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004487014.1	PFAM: MaoC-like dehydratase; KEGG: vei:Veis_1582 dehydratase
YP_004487015.1	KEGG: reu:Reut_B4151 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004487016.1	KEGG: vei:Veis_1580 citryl-CoA lyase; PFAM: HpcH/HpaI aldolase
YP_004487017.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll6371 ABC transporter substrate-binding protein
YP_004487018.1	PFAM: Bacterial inner-membrane translocator; KEGG: bja:bll6370 ABC transporter permease protein
YP_004487019.1	PFAM: Bacterial inner-membrane translocator; KEGG: bja:bll6369 ABC transporter permease protein
YP_004487020.1	PFAM: ABC transporter-like; KEGG: bja:bll6368 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004487021.1	PFAM: ABC transporter-like; KEGG: bja:bll6367 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004487022.1	PFAM: MmgE/PrpD; KEGG: bbr:BB4700 hypothetical protein
YP_004487023.1	KEGG: aac:Aaci_0216 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487024.1	TIGRFAM: Quinone oxidoreductase putative, PIG3; KEGG: pla:Plav_2092 quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004487025.1	PFAM: Amidohydrolase 2; KEGG: bja:blr7937 hypothetical protein
YP_004487026.1	KEGG: cti:RALTA_B1745 putative citrate lyase/aldolase; PFAM: HpcH/HpaI aldolase
YP_004487028.1	PFAM: Major facilitator superfamily MFS-1; KEGG: rfr:Rfer_0960 major facilitator transporter
YP_004487029.1	KEGG: dia:Dtpsy_2974 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004487030.1	KEGG: sjp:SJA_C1-02370 naphthoate synthase; PFAM: Crotonase, core
YP_004487031.1	PFAM: Amidohydrolase 2; KEGG: dvl:Dvul_0495 amidohydrolase 2
YP_004487032.1	KEGG: bxe:Bxe_A2746 putative long chain fatty acid CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004487033.1	KEGG: bph:Bphy_7495 hypothetical protein
YP_004487034.1	PFAM: HTH transcriptional regulator, LysR; KEGG: pol:Bpro_4035 LysR family transcriptional regulator
YP_004487035.1	PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: vap:Vapar_6002 aspartate alpha-decarboxylase
YP_004487036.1	KEGG: bav:BAV3054 exported protein
YP_004487037.1	KEGG: pol:Bpro_4383 putative porin precursor transmembrane protein
YP_004487038.1	KEGG: hypothetical protein
YP_004487039.1	KEGG: eba:p2A140 IclR family regulatory protein; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004487040.1	KEGG: vei:Veis_2929 hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif
YP_004487041.1	KEGG: pna:Pnap_4627 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004487042.1	KEGG: pna:Pnap_4626 4,5-dihydroxyphthalate decarboxylase
YP_004487043.1	TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: mpt:Mpe_A1553 nicotinate-nucleotide pyrophosphorylase [carboxylating]; PFAM: Quinolinate phosphoribosyl transferase
YP_004487044.1	KEGG: pna:Pnap_4624 ferredoxin; PFAM: Ferredoxin; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_004487045.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: pna:Pnap_4623 oxidoreductase domain-containing protein
YP_004487046.1	KEGG: bpm:BURPS1710b_A1695 hypothetical protein
YP_004487047.1	KEGG: bpt:Bpet0252 putative dioxygenase; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004487048.1	KEGG: son:SO_3029 hypothetical protein
YP_004487049.1	PFAM: Integrase, catalytic core; KEGG: tmz:Tmz1t_0317 transposase, IS21 family
YP_004487050.1	KEGG: pna:Pnap_2467 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004487051.1	manually curated
YP_004487052.1	KEGG: vei:Veis_0167 putative ABC transporter, periplasmic molybdate binding protein
YP_004487053.1	PFAM: Amidohydrolase 2; KEGG: pol:Bpro_4320 amidohydrolase 2
YP_004487054.1	KEGG: dac:Daci_4448 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
YP_004487055.1	PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: azo:azo2540 putative 3-hydroxyisobutyrate dehydrogenase
YP_004487056.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4447 amidohydrolase 2
YP_004487057.1	TIGRFAM: Protocatechuate 4,5-dioxygenase, alpha subunit; KEGG: dac:Daci_4446 protocatechuate 4,5-dioxygenase subunit alpha; PFAM: Extradiol ring-cleavage dioxygenase LigAB, LigA subunit
YP_004487058.1	KEGG: rpx:Rpdx1_4877 extradiol ring-cleavage dioxygenase class III protein subunit B; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
YP_004487059.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: dac:Daci_4444 oxidoreductase domain-containing protein
YP_004487060.1	KEGG: rfr:Rfer_0302 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004487061.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: bpy:Bphyt_0291 cobalamin synthesis protein P47K
YP_004487062.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: bxe:Bxe_A2766 non-heme peroxidase
YP_004487063.1	KEGG: ajs:Ajs_1521 hypothetical protein
YP_004487064.1	PFAM: TraG-like, N-terminal; KEGG: ajs:Ajs_1524 TraG domain-containing protein
YP_004487065.1	PFAM: Type IV conjugative transfer system protein TraH; KEGG: ajs:Ajs_1525 TraH family protein
YP_004487066.1	TIGRFAM: Type IV conjugative transfer system protein TraF; KEGG: ajs:Ajs_1526 hypothetical protein
YP_004487067.1	KEGG: ajs:Ajs_1527 hypothetical protein
YP_004487068.1	KEGG: ajs:Ajs_1528 conjugal transfer mating pair stabilization protein TraN
YP_004487069.1	KEGG: ajs:Ajs_1529 hypothetical protein; TIGRFAM: Type-F conjugative transfer system pilin assembly protein TrbC, subgroup; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC
YP_004487070.1	PFAM: TraU; KEGG: ajs:Ajs_1530 TraU family protein
YP_004487071.1	TIGRFAM: Type-F conjugative transfer system protein TraW; KEGG: ajs:Ajs_1531 membrane lipoprotein lipid attachment site
YP_004487072.1	KEGG: ajs:Ajs_1532 hypothetical protein
YP_004487073.1	KEGG: ajs:Ajs_1533 hypothetical protein; TIGRFAM: Peptidase S26C, conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region
YP_004487074.1	KEGG: ajs:Ajs_1534 hypothetical protein
YP_004487075.1	TIGRFAM: Type-IV secretion system protein TraC; KEGG: ajs:Ajs_1535 hypothetical protein
YP_004487076.1	PFAM: Type IV secretion system, TraV; KEGG: ajs:Ajs_1536 hypothetical protein
YP_004487077.1	PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: ajs:Ajs_1537 periplasmic thiol:disulfide interchange protein
YP_004487078.1	KEGG: ajs:Ajs_1538 TraB pilus assembly family protein
YP_004487079.1	KEGG: ajs:Ajs_1539 hypothetical protein
YP_004487080.1	KEGG: ajs:Ajs_1540 plasmid-like conjugative transfer protein TraE; TIGRFAM: TraE; PFAM: TraE
YP_004487081.1	KEGG: ajs:Ajs_1541 TraL family protein; TIGRFAM: Type IV conjugative transfer system protein TraL; PFAM: Type IV conjugative transfer system protein TraL, proteobacteria
YP_004487082.1	KEGG: ajs:Ajs_1542 hypothetical protein
YP_004487083.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: eba:ebA6593 lipoprotein
YP_004487084.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: ajs:Ajs_1544 lytic transglycosylase, catalytic
YP_004487085.1	KEGG: eba:ebA6591 hypothetical protein
YP_004487086.1	KEGG: mpt:Mpe_A3165 putative HNS-like transcription regulator protein; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004487087.1	KEGG: ajs:Ajs_1548 hypothetical protein
YP_004487088.1	TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily; KEGG: dar:Daro_2307 hypothetical protein
YP_004487089.1	PFAM: Protein of unknown function, putative helicase/relaxase; KEGG: dar:Daro_2597 relaxase
YP_004487090.1	PFAM: Flagellar transcriptional activator FlhC; KEGG: ajs:Ajs_1551 hypothetical protein
YP_004487091.1	KEGG: ajs:Ajs_1552 hypothetical protein
YP_004487092.1	KEGG: ajs:Ajs_1553 putative phage repressor
YP_004487093.1	KEGG: dar:Daro_2574 hypothetical protein
YP_004487094.1	KEGG: dar:Daro_2291 hypothetical protein; PFAM: Phage P4 alpha, zinc-binding; SMART: Phage P4 alpha, zinc-binding
YP_004487095.1	KEGG: ajs:Ajs_1558 hypothetical protein
YP_004487097.1	KEGG: dar:Daro_2287 hypothetical protein
YP_004487098.1	KEGG: dar:Daro_2286 hypothetical protein
YP_004487099.1	PFAM: Prophage CP4-57 regulatory; KEGG: dar:Daro_2246 prophage CP4-57 regulatory
YP_004487100.1	PFAM: PilT protein, N-terminal; KEGG: neu:NE1064 PilT domain-containing protein
YP_004487102.1	PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: bac:BamMC406_4531 filamentation induced by cAMP protein Fic
YP_004487103.1	PFAM: Integrase, catalytic core, phage; KEGG: ajs:Ajs_1565 phage integrase family protein
YP_004487104.1	KEGG: dar:Daro_2230 hypothetical protein
YP_004487105.1	KEGG: helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004487106.1	KEGG: ajs:Ajs_1574 hypothetical protein
YP_004487107.1	KEGG: vei:Veis_2779 hypothetical protein
YP_004487109.1	KEGG: aav:Aave_0556 hypothetical protein
YP_004487110.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: reu:Reut_A1909 regulatory protein, LysR:LysR, substrate-binding
YP_004487111.1	KEGG: reu:Reut_A1908 hypothetical protein
YP_004487112.1	PFAM: CoA-binding; KEGG: reu:Reut_A1907 CoA-binding
YP_004487113.1	PFAM: Crotonase, core; KEGG: reu:Reut_A1906 enoyl-CoA hydratase/isomerase
YP_004487114.1	PFAM: Protein of unknown function DUF1173; KEGG: dar:Daro_2244 hypothetical protein
YP_004487115.1	KEGG: afr:AFE_1120 hypothetical protein
YP_004487116.1	KEGG: bpr:GBP346_A2851 autoinducer-binding transcriptional regulator, LuxR family; PFAM: Autoinducer-binding; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004487117.1	KEGG: afr:AFE_1998 hypothetical protein
YP_004487118.1	KEGG: hna:Hneap_0965 acyl-homoserine-lactone synthase; PFAM: Autoinducer synthesis protein
YP_004487121.1	KEGG: vap:Vapar_4530 hypothetical protein
YP_004487122.1	PFAM: Transposase, IS66; KEGG: pol:Bpro_5535 transposase IS66
YP_004487123.1	KEGG: transposase IS3/is911 family protein
YP_004487124.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rha:RHA1_ro10145 ethylbenzene dioxygenase, ferredoxin component
YP_004487125.1	KEGG: mpt:Mpe_A0819 toluene monooxygenase oxidoreductase; PFAM: Oxidoreductase FAD-binding region; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding
YP_004487126.1	KEGG: pna:Pnap_4147 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487127.1	KEGG: nar:Saro_3901 ring hydroxylating dioxygenase, alpha subunit; PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal; Rieske [2Fe-2S] iron-sulphur domain
YP_004487128.1	PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: rha:RHA1_ro10144 3-phenylpropionate dioxygenase subunit beta
YP_004487129.1	PFAM: DSBA oxidoreductase; KEGG: pna:Pnap_2478 DsbA oxidoreductase
YP_004487130.1	PFAM: Transposase, IS4-like; KEGG: bmj:BMULJ_05861 ISBmu20 transposase
YP_004487131.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: hba:Hbal_2583 transcriptional regulator, TetR family
YP_004487132.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: glutathione S-transferase domain protein
YP_004487133.1	PFAM: Dihydrodipicolinate synthetase; KEGG: mjl:Mjls_4205 dihydrodipicolinate synthetase
YP_004487134.1	PFAM: Cupin 2, conserved barrel; KEGG: bav:BAV0613 1-hydroxy-2-naphthoate dioxygenase
YP_004487135.1	PFAM: Transposase, IS4-like; KEGG: vei:Veis_3679 transposase, IS4 family protein
YP_004487136.1	manually curated; PFAM: HTH transcriptional regulator, MarR; KEGG: azl:AZL_013300 transcriptional regulator; SMART: HTH transcriptional regulator, MarR
YP_004487137.1	manually curated; KEGG: nar:Saro_3865 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004487138.1	KEGG: nar:Saro_3848 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde dehydrogenase
YP_004487139.1	PFAM: Protein of unknown function DUF1302; KEGG: bge:BC1002_4161 protein of unknown function DUF1302
YP_004487140.1	PFAM: Protein of unknown function DUF1329; KEGG: bge:BC1002_4162 protein of unknown function DUF1329
YP_004487141.1	KEGG: bge:BC1002_4175 BNR domain-containing protein
YP_004487142.1	KEGG: ppu:PP_3202 transporter, putative
YP_004487143.1	PFAM: Dihydrodipicolinate synthetase; KEGG: nar:Saro_3836 dihydrodipicolinate synthetase
YP_004487144.1	PFAM: Transposase, IS4-like; KEGG: ajs:Ajs_2718 transposase, IS4 family protein
YP_004487145.1	PFAM: Protein of unknown function DUF81; KEGG: pna:Pnap_2371 hypothetical protein
YP_004487146.1	KEGG: mac:MA1425 transposase
YP_004487147.1	PFAM: Integrase, catalytic core; Transposase IS3/IS911; KEGG: ajs:Ajs_3050 integrase catalytic subunit
YP_004487148.1	KEGG: IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004487149.1	KEGG: isochorismatase hydrolase; PFAM: Isochorismatase-like
YP_004487150.1	KEGG: ara:Arad_7226 betaine aldehyde dehydrogenase (BADH) protein; PFAM: Aldehyde dehydrogenase
YP_004487151.1	PFAM: Protein of unknown function DUF81; KEGG: pfo:Pfl01_0716 hypothetical protein
YP_004487152.1	SMART: Helicase, ATP-dependent, c2 type; KEGG: cvi:CV_1991 ATP-dependent DNA helicase DinG
YP_004487153.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mep:MPQ_2057 transcriptional regulator, LysR family
YP_004487157.1	KEGG: sal:Sala_2657 hypothetical protein
YP_004487158.1	KEGG: ajs:Ajs_1580 hypothetical protein
YP_004487159.1	KEGG: ajs:Ajs_1581 hypothetical protein
YP_004487160.1	KEGG: mes:Meso_3813 hypothetical protein
YP_004487161.1	KEGG: dia:Dtpsy_2127 hypothetical protein
YP_004487164.1	KEGG: ddd:Dda3937_04395 hypothetical protein
YP_004487165.1	KEGG: ddd:Dda3937_02585 cell filamentation protein
YP_004487166.1	KEGG: amd:AMED_4650 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004487167.1	KEGG: cwo:Cwoe_3300 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004487168.1	KEGG: mpt:Mpe_A3605 hypothetical protein
YP_004487169.1	KEGG: rme:Rmet_5058 extra-cytoplasmic solute receptor
YP_004487170.1	KEGG: ajs:Ajs_1577 hypothetical protein
YP_004487171.1	KEGG: opr:Ocepr_2277 hypothetical protein
YP_004487172.1	manually curated; KEGG: tin:Tint_3025 plasmid stabilization system
YP_004487173.1	KEGG: ajs:Ajs_4313 hypothetical protein
YP_004487174.1	KEGG: mes:Meso_3813 hypothetical protein
YP_004487175.1	KEGG: mei:Msip34_1649 hypothetical protein
YP_004487177.1	KEGG: scl:sce6923 hypothetical protein
YP_004487178.1	PFAM: HTH transcriptional regulator, MerR; KEGG: pol:Bpro_5413 hypothetical protein
YP_004487179.1	KEGG: bac:BamMC406_6530 hypothetical protein
YP_004487181.1	KEGG: alv:Alvin_3239 hypothetical protein
YP_004487182.1	KEGG: dac:Daci_3140 hypothetical protein
YP_004487183.1	manually curated; KEGG: dac:Daci_3141 hypothetical protein
YP_004487184.1	KEGG: pol:Bpro_5428 hypothetical protein
YP_004487185.1	KEGG: bpl:BURPS1106A_0093 hypothetical protein
YP_004487186.1	KEGG: gme:Gmet_0665 hypothetical protein
YP_004487187.1	KEGG: pol:Bpro_1540 hypothetical protein
YP_004487188.1	KEGG: pol:Bpro_1541 hypothetical protein
YP_004487189.1	KEGG: pol:Bpro_1545 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004487190.1	PFAM: Protein of unknown function DUF955; KEGG: pol:Bpro_1546 hypothetical protein
YP_004487191.1	KEGG: ppg:PputGB1_0518 hypothetical protein
YP_004487192.1	KEGG: ppg:PputGB1_0517 integrase family protein
YP_004487193.1	PFAM: Integrase, catalytic core, phage; KEGG: ppg:PputGB1_0515 integrase family protein
YP_004487194.1	KEGG: ajs:Ajs_1586 hypothetical protein
YP_004487195.1	KEGG: ajs:Ajs_1589 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004487196.1	TIGRFAM: PRTRC system ParB family protein; ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: ajs:Ajs_1591 ParB family protein; SMART: ParB-like nuclease
YP_004487197.1	TIGRFAM: PRTRC system protein E; KEGG: ajs:Ajs_1592 hypothetical protein
YP_004487198.1	KEGG: ajs:Ajs_1593 hypothetical protein
YP_004487199.1	TIGRFAM: PRTRC system protein F; KEGG: ajs:Ajs_1594 hypothetical protein
YP_004487200.1	TIGRFAM: PRTRC system protein B; KEGG: ajs:Ajs_1595 hypothetical protein
YP_004487201.1	KEGG: ajs:Ajs_1596 hypothetical protein; TIGRFAM: PRTRC system protein A; PFAM: Domain of unknown function DUF2016
YP_004487202.1	KEGG: ajs:Ajs_1597 UBA/ThiF-type NAD/FAD binding protein; TIGRFAM: PRTRC system ThiF family protein; PFAM: UBA/THIF-type NAD/FAD binding fold
YP_004487203.1	SMART: ParB-like nuclease; KEGG: dar:Daro_2219 ParB-like nuclease
YP_004487204.1	KEGG: hypothetical protein
YP_004487205.1	KEGG: dar:Daro_2531 phage integrase, N-terminal SAM-like
YP_004487206.1	KEGG: gur:Gura_4041 hypothetical protein
YP_004487207.1	PFAM: Transposase, mutator type; KEGG: rme:Rmet_2268 transposase, mutator type
YP_004487208.1	PFAM: Transposase IS3/IS911; KEGG: transposase IS3/is911 family protein
YP_004487209.1	KEGG: bge:BC1002_6990 transposase IS116/IS110/IS902 family protein; manually curated; PFAM: Transposase, IS116/IS110/IS902
YP_004487210.1	KEGG: ajs:Ajs_1600 hypothetical protein; TIGRFAM: PRTRC system protein D; PFAM: StbA
YP_004487212.1	TIGRFAM: PRTRC system protein D; KEGG: ajs:Ajs_1600 hypothetical protein
YP_004487213.1	KEGG: ajs:Ajs_1601 hypothetical protein
YP_004487214.1	manually curated
YP_004487215.1	KEGG: pna:Pnap_2467 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004487216.1	PFAM: Integrase, catalytic core; KEGG: tmz:Tmz1t_0317 transposase, IS21 family
YP_004487217.1	manually curated; KEGG: dar:Daro_2215 hypothetical protein
YP_004487218.1	KEGG: dar:Daro_2527 hypothetical protein
YP_004487219.1	PFAM: DNA helicase, UvrD/REP type; KEGG: reh:PHG167 helicase superfamily protein I
YP_004487220.1	PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: reh:PHG168 hypothetical protein
YP_004487221.1	PFAM: Integrase, catalytic core, phage; KEGG: bge:BC1002_6580 integrase family protein
YP_004487222.1	PFAM: Peptidase M50; KEGG: dal:Dalk_3252 peptidase M50
YP_004487223.1	PFAM: Fimbrial protein, C-terminal; KEGG: dac:Daci_4996 fimbrial protein
YP_004487224.1	KEGG: dac:Daci_4995 cytosine deaminase; PFAM: Amidohydrolase 3
YP_004487225.1	KEGG: dac:Daci_4994 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_004487226.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4993 LysR family transcriptional regulator
YP_004487227.1	KEGG: dac:Daci_4992 hypothetical protein
YP_004487228.1	KEGG: dac:Daci_4991 hypothetical protein
YP_004487229.1	KEGG: dac:Daci_4990 Ig domain-containing protein; PFAM: Bacterial Ig-like, group 1; SMART: Bacterial Ig-like, group 1
YP_004487230.1	PFAM: Phage Tail Collar; KEGG: dac:Daci_4989 tail collar domain-containing protein
YP_004487231.1	PFAM: Phage Tail Collar; KEGG: dac:Daci_4988 tail collar domain-containing protein
YP_004487232.1	PFAM: Phage Tail Collar; KEGG: dac:Daci_4987 tail collar domain-containing protein
YP_004487233.1	KEGG: dac:Daci_4986 hypothetical protein
YP_004487234.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_4985 GCN5-related N-acetyltransferase
YP_004487235.1	KEGG: dac:Daci_4984 hypothetical protein
YP_004487236.1	KEGG: mxa:MXAN_3564 M36 family peptidase; manually curated; PFAM: Peptidase M36, fungalysin; Protease-associated PA; Bacterial Ig-like, group 1
YP_004487237.1	KEGG: dac:Daci_4983 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase
YP_004487238.1	KEGG: dac:Daci_4982 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal
YP_004487239.1	HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: dac:Daci_4981 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA
YP_004487240.1	KEGG: dac:Daci_4980 hypothetical protein
YP_004487241.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4979 LysR family transcriptional regulator
YP_004487242.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4978 LysR family transcriptional regulator
YP_004487243.1	KEGG: dac:Daci_4977 hypothetical protein; HAMAP: UPF0317 protein; PFAM: Protein of unknown function DUF1445
YP_004487244.1	KEGG: dac:Daci_4976 5-oxoprolinase; PFAM: Hydantoinase B/oxoprolinase; Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal
YP_004487245.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4975 major facilitator transporter
YP_004487246.1	PFAM: Domain of unknown function DUF1993; KEGG: dac:Daci_4974 hypothetical protein
YP_004487247.1	KEGG: mmw:Mmwyl1_0641 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004487248.1	KEGG: axy:AXYL_02944 RNA polymerase sigma factor sigma-70 family protein 4; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004487249.1	PFAM: FecR protein; KEGG: axy:AXYL_02945 FecR family protein 11
YP_004487250.1	KEGG: ctt:CtCNB1_2083 Fe(3+)-pyochelin receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004487251.1	KEGG: axy:AXYL_02541 RNA polymerase sigma factor FecI 5; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004487252.1	PFAM: FecR protein; KEGG: axy:AXYL_02540 FecR family protein 9
YP_004487253.1	KEGG: axy:AXYL_05330 TonB-dependent siderophore receptor family protein 19; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004487254.1	PFAM: Metallophosphoesterase; KEGG: dac:Daci_4972 metallophosphoesterase
YP_004487255.1	KEGG: dac:Daci_4971 dihydrofolate reductase; PFAM: Dihydrofolate reductase region
YP_004487256.1	TIGRFAM: Thymidylate synthase, C-terminal; KEGG: dac:Daci_4970 thymidylate synthase; PFAM: Thymidylate synthase, C-terminal
YP_004487257.1	KEGG: dac:Daci_4969 hypothetical protein
YP_004487258.1	KEGG: dac:Daci_4968 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004487259.1	PFAM: Protein of unknown function DUF2069, membrane; KEGG: dac:Daci_4967 membrane protein-like protein
YP_004487260.1	TIGRFAM: Ribonuclease BN; HAMAP: UPF0761 membrane protein yihY; KEGG: dac:Daci_4966 ribonuclease BN; PFAM: Ribonuclease BN-related
YP_004487261.1	PFAM: Protein of unknown function DUF2253, membrane; KEGG: dac:Daci_4965 membrane protein
YP_004487262.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_4964 alpha/beta hydrolase fold protein
YP_004487263.1	KEGG: dac:Daci_4963 AraC family transcriptional regulator; PFAM: Acetamidase/Formamidase; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004487264.1	PFAM: Acetamidase/Formamidase; KEGG: dac:Daci_4962 acetamidase/formamidase
YP_004487265.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_4961 alpha/beta hydrolase fold protein
YP_004487266.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: dac:Daci_4960 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004487267.1	KEGG: dac:Daci_4959 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004487268.1	KEGG: dac:Daci_4958 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004487269.1	TIGRFAM: Chorismate synthase; KEGG: dac:Daci_4957 chorismate synthase; PFAM: Chorismate synthase
YP_004487270.1	KEGG: dac:Daci_4956 transcriptional regulator NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone
YP_004487271.1	KEGG: dac:Daci_4955 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004487272.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: dac:Daci_4954 lytic transglycosylase catalytic
YP_004487273.1	PFAM: Protein of unknown function DUF748; KEGG: dac:Daci_4953 hypothetical protein
YP_004487274.1	KEGG: dac:Daci_4952 hypothetical protein
YP_004487275.1	TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; KEGG: dac:Daci_4951 ribonuclease R; SMART: Cold shock protein
YP_004487276.1	KEGG: dac:Daci_4950 carbohydrate kinase, YjeF related protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal
YP_004487277.1	KEGG: dac:Daci_4949 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004487278.1	KEGG: dac:Daci_4948 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2
YP_004487279.1	TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: dac:Daci_4947 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal
YP_004487280.1	KEGG: dac:Daci_4946 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase
YP_004487281.1	KEGG: dac:Daci_4945 ribosome recycling factor; TIGRFAM: Ribosome recycling factor; PFAM: Ribosome recycling factor
YP_004487282.1	PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: dac:Daci_4944 undecaprenyl diphosphate synthase
YP_004487283.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: dac:Daci_4943 phosphatidate cytidylyltransferase
YP_004487284.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: dac:Daci_4942 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_004487285.1	TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; KEGG: dac:Daci_4941 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF
YP_004487286.1	KEGG: dac:Daci_4940 outer membrane protein assembly complex protein YaeT; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number
YP_004487287.1	PFAM: Outer membrane chaperone Skp (OmpH); KEGG: dac:Daci_4939 outer membrane chaperone OmpH
YP_004487288.1	TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: dac:Daci_4938 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat
YP_004487289.1	KEGG: dac:Daci_4937 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004487290.1	PFAM: Bacterial transferase hexapeptide repeat; TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: dac:Daci_4936 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
YP_004487291.1	PFAM: Glycosyl transferase, family 19; TIGRFAM: Glycosyl transferase, family 19; HAMAP: Lipid-A-disaccharide synthase; KEGG: dac:Daci_4935 lipid-A-disaccharide synthase
YP_004487292.1	KEGG: dac:Daci_4934 ribonuclease HII; PFAM: Ribonuclease HII/HIII
YP_004487293.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: dac:Daci_4933 tRNA/rRNA methyltransferase SpoU
YP_004487294.1	TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: dac:Daci_4932 carbamoyl-phosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004487295.1	TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: dac:Daci_4931 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like
YP_004487296.1	KEGG: dac:Daci_4930 transcription elongation factor GreA; TIGRFAM: Prokaryotic transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic
YP_004487297.1	KEGG: dac:Daci_4929 hypothetical protein
YP_004487298.1	KEGG: dac:Daci_4928 hypothetical protein
YP_004487299.1	PFAM: RNA-binding, CRM domain; KEGG: dac:Daci_4927 hypothetical protein
YP_004487300.1	KEGG: dac:Daci_4926 ribosomal RNA methyltransferase RrmJ/FtsJ; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ
YP_004487301.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: dac:Daci_4925 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular
YP_004487302.1	TIGRFAM: Dihydropteroate synthase; KEGG: dac:Daci_4924 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS
YP_004487303.1	TIGRFAM: Phosphoglucosamine mutase; KEGG: dac:Daci_4923 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004487304.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dac:Daci_4922 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAC motif
YP_004487305.1	KEGG: dac:Daci_4921 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase
YP_004487306.1	TIGRFAM: polyphosphate kinase 1; KEGG: dac:Daci_4920 polyphosphate kinase; PFAM: Polyphosphate kinase
YP_004487307.1	KEGG: dac:Daci_4919 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase
YP_004487308.1	KEGG: dac:Daci_4918 phosphate ABC transporter periplasmic phosphate-binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004487309.1	KEGG: dac:Daci_4917 phosphate ABC transporter inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004487310.1	KEGG: dac:Daci_4916 phosphate transporter permease subunit PtsA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004487311.1	SMART: ATPase, AAA+ type, core; K Homology; TIGRFAM: Phosphate transport system permease protein 1; KEGG: dac:Daci_4915 phosphate ABC transporter ATPase subunit; PFAM: ABC transporter-like
YP_004487312.1	KEGG: dac:Daci_4914 phosphate uptake regulator PhoU; TIGRFAM: PhoU; PFAM: PhoU
YP_004487313.1	TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: dac:Daci_4913 two component transcriptional regulator; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004487314.1	TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; KEGG: dac:Daci_4912 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS
YP_004487315.1	KEGG: dac:Daci_4911 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_004487316.1	KEGG: dac:Daci_4910 putative inner membrane transmembrane protein
YP_004487317.1	KEGG: dac:Daci_4909 ribosomal protein L31; TIGRFAM: Ribosomal protein L31; PFAM: Ribosomal protein L31
YP_004487318.1	PFAM: Citrate synthase-like; HTH transcriptional regulator, MerR; KEGG: dac:Daci_4908 citrate synthase
YP_004487319.1	PFAM: CoA-transferase family III; KEGG: dac:Daci_4907 L-carnitine dehydratase/bile acid-inducible protein F
YP_004487320.1	TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, N-terminal; Rho termination factor, RNA-binding; KEGG: dac:Daci_4906 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core
YP_004487321.1	KEGG: dac:Daci_4905 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004487322.1	KEGG: dac:Daci_4904 hypothetical protein; TIGRFAM: uncharacterized flavoprotein, PP_4765 family; HI0933-like protein; PFAM: HI0933-like protein
YP_004487323.1	TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: Shikimate kinase; KEGG: dac:Daci_4903 DNA polymerase III subunits gamma and tau; SMART: ATPase, AAA+ type, core
YP_004487324.1	KEGG: dac:Daci_4902 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0133; PFAM: Uncharacterised protein family UPF0133
YP_004487325.1	KEGG: dac:Daci_4901 recombination protein RecR; TIGRFAM: RecR protein; SMART: Toprim domain, subgroup; Helix-hairpin-helix DNA-binding motif, class 1
YP_004487326.1	KEGG: dac:Daci_4900 membrane protein-like protein
YP_004487327.1	manually curated; KEGG: dac:Daci_4899 twin-arginine translocation pathway signal protein
YP_004487328.1	KEGG: dac:Daci_4898 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; MLTD-N; SMART: Peptidoglycan-binding Lysin subgroup
YP_004487329.1	KEGG: dac:Daci_4897 hydroxyacylglutathione hydrolase; TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase
YP_004487330.1	PFAM: Methyltransferase type 11; KEGG: dac:Daci_4896 type 11 methyltransferase
YP_004487331.1	HAMAP: Ribonuclease H; KEGG: dac:Daci_4895 ribonuclease H; PFAM: Ribonuclease H
YP_004487332.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_4894 porin
YP_004487333.1	KEGG: dac:Daci_4893 2Fe-2S iron-sulfur cluster-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin
YP_004487334.1	KEGG: dac:Daci_4892 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
YP_004487335.1	KEGG: dac:Daci_4891 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004487336.1	KEGG: dac:Daci_4890 hypothetical protein
YP_004487337.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_4889 TetR family transcriptional regulator
YP_004487338.1	KEGG: dac:Daci_4888 thioredoxin domain-containing protein
YP_004487339.1	KEGG: dac:Daci_4887 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV
YP_004487340.1	KEGG: dac:Daci_4886 molybdopterin-guanine dinucleotide biosynthesis protein A; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A
YP_004487341.1	TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: dac:Daci_4885 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_004487342.1	KEGG: dac:Daci_4884 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487343.1	KEGG: dac:Daci_4883 hypothetical protein
YP_004487344.1	PFAM: Aldehyde dehydrogenase; KEGG: dac:Daci_4882 aldehyde dehydrogenase
YP_004487345.1	KEGG: dac:Daci_4881 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_004487346.1	KEGG: dac:Daci_4880 hypothetical protein
YP_004487347.1	HAMAP: Inorganic pyrophosphatase; KEGG: dac:Daci_4879 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase
YP_004487348.1	KEGG: dac:Daci_4878 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004487349.1	KEGG: dac:Daci_4877 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004487350.1	PFAM: Protein of unknown function DUF482; KEGG: dac:Daci_4876 hypothetical protein
YP_004487351.1	TIGRFAM: NAD+ synthase; KEGG: dac:Daci_4875 NAD+ synthetase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004487352.1	PFAM: Nitrogen regulatory protein PII; KEGG: dac:Daci_4874 nitrogen regulatory protein P-II
YP_004487353.1	KEGG: dac:Daci_4873 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730
YP_004487354.1	PFAM: Diacylglycerol kinase, prokaryotic; KEGG: dac:Daci_4872 diacylglycerol kinase
YP_004487355.1	PFAM: RDD; KEGG: dac:Daci_4871 RDD domain-containing protein
YP_004487356.1	KEGG: dac:Daci_4870 putative transmembrane protein
YP_004487357.1	KEGG: dac:Daci_4869 putative transmembrane protein
YP_004487358.1	KEGG: dac:Daci_4868 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2
YP_004487359.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: dac:Daci_4867 acetolactate synthase 3 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004487360.1	KEGG: dac:Daci_4866 acetolactate synthase 3 regulatory subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT
YP_004487361.1	TIGRFAM: Acetohydroxy acid isomeroreductase; KEGG: dac:Daci_4865 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal
YP_004487362.1	KEGG: dac:Daci_4864 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004487363.1	TIGRFAM: Yeast 2-isopropylmalate synthase; KEGG: dac:Daci_4863 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004487364.1	TIGRFAM: Bacterial 2-isopropylmalate synthase; KEGG: dac:Daci_4862 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004487365.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; KEGG: dac:Daci_4861 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
YP_004487366.1	KEGG: dac:Daci_4860 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004487367.1	PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal; KEGG: dac:Daci_4859 arginyl-tRNA-protein transferase
YP_004487368.1	PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: dac:Daci_4858 leucyl/phenylalanyl-tRNA--protein transferase
YP_004487369.1	KEGG: dac:Daci_4857 hypothetical protein
YP_004487370.1	PFAM: Protein of unknown function DUF454; KEGG: dac:Daci_4856 hypothetical protein
YP_004487371.1	PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: dac:Daci_4855 peptide deformylase
YP_004487372.1	KEGG: dac:Daci_4854 xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004487373.1	KEGG: dac:Daci_4853 PII uridylyl-transferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; TIGRFAM: Protein-PII uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; SMART: Metal-dependent phosphohydrolase, HD region
YP_004487374.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: dac:Daci_4852 methionine aminopeptidase; PFAM: Peptidase M24, structural domain
YP_004487375.1	PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: dac:Daci_4851 phosphoribosylformylglycinamidine synthase
YP_004487376.1	KEGG: dac:Daci_4850 uracil-DNA glycosylase superfamily protein
YP_004487377.1	PFAM: Radical SAM; KEGG: dac:Daci_4849 radical SAM domain-containing protein
YP_004487378.1	KEGG: dac:Daci_4848 zinc finger SWIM domain-containing protein
YP_004487379.1	KEGG: dac:Daci_4847 hypothetical protein
YP_004487380.1	PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: dac:Daci_4846 ATPase
YP_004487381.1	KEGG: dac:Daci_4845 hypothetical protein
YP_004487382.1	KEGG: dac:Daci_4844 VWA containing CoxE family protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A
YP_004487383.1	PFAM: Protein of unknown function DUF808; KEGG: dac:Daci_4843 hypothetical protein
YP_004487384.1	KEGG: dac:Daci_4842 hypothetical protein
YP_004487385.1	PFAM: Tetratricopeptide TPR2; KEGG: dac:Daci_4841 TPR repeat-containing protein
YP_004487386.1	KEGG: dac:Daci_4840 hypothetical protein
YP_004487387.1	KEGG: gpb:HDN1F_30740 DNA polymerase, beta-like region
YP_004487388.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_4837 glutathione S-transferase domain-containing protein
YP_004487390.1	KEGG: axy:AXYL_00851 ornibactin receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel
YP_004487391.1	PFAM: FecR protein; KEGG: mei:Msip34_0802 anti-FecI sigma factor, FecR
YP_004487392.1	KEGG: hse:Hsero_2433 RNA polymerase sigma-70 factor, ECF subfamily (sigma-24) transcription regulator protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004487393.1	PFAM: Outer membrane protein, OmpW; KEGG: dac:Daci_4836 OmpW family protein
YP_004487394.1	KEGG: dac:Daci_4835 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260
YP_004487395.1	KEGG: dac:Daci_4834 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor
YP_004487396.1	KEGG: dac:Daci_4833 hypothetical protein
YP_004487397.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: dac:Daci_4832 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004487398.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_4831 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004487399.1	PFAM: 3'-5' exonuclease; KEGG: dac:Daci_4830 3'-5' exonuclease
YP_004487400.1	PFAM: Crotonase, core; KEGG: dac:Daci_4829 enoyl-CoA hydratase/isomerase
YP_004487401.1	KEGG: dac:Daci_4828 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487402.1	KEGG: dac:Daci_4827 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004487403.1	KEGG: dac:Daci_4826 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004487404.1	KEGG: dac:Daci_4825 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004487405.1	KEGG: dac:Daci_4824 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004487406.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_4823 extracellular ligand-binding receptor
YP_004487407.1	PFAM: Crotonase, core; KEGG: dac:Daci_4822 enoyl-CoA hydratase/isomerase
YP_004487408.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4821 inner-membrane translocator
YP_004487409.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4820 inner-membrane translocator
YP_004487410.1	KEGG: dac:Daci_4819 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004487411.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4818 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487412.1	KEGG: dac:Daci_4817 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004487413.1	KEGG: dac:Daci_4816 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487414.1	KEGG: dac:Daci_4815 ATP-dependent transcription regulator LuxR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004487415.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_4814 GCN5-related N-acetyltransferase
YP_004487416.1	TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; KEGG: dac:Daci_4813 oxidoreductase alpha subunit; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase
YP_004487417.1	KEGG: dac:Daci_4812 hypothetical protein
YP_004487418.1	PFAM: Peptidase U32; KEGG: dac:Daci_4811 peptidase U32
YP_004487419.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_4810 extracellular ligand-binding receptor
YP_004487420.1	PFAM: CMP/dCMP deaminase, zinc-binding; Alpha/beta hydrolase fold-1; KEGG: dac:Daci_4809 CMP/dCMP deaminase zinc-binding
YP_004487421.1	KEGG: dac:Daci_4808 muramoyltetrapeptide carboxypeptidase; PFAM: Peptidase S66, LD-carboxypeptidase A
YP_004487422.1	PFAM: Fatty acid hydroxylase; KEGG: dac:Daci_4807 fatty acid hydroxylase
YP_004487423.1	KEGG: dac:Daci_4806 hypothetical protein
YP_004487424.1	PFAM: Peptidase S45, penicillin amidase; KEGG: dac:Daci_4805 peptidase S45 penicillin amidase
YP_004487425.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_4804 alpha/beta hydrolase fold protein
YP_004487426.1	KEGG: dac:Daci_4803 hypothetical protein
YP_004487427.1	PFAM: Protein of unknown function DUF2136; KEGG: dac:Daci_4802 hypothetical protein
YP_004487428.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dac:Daci_4801 extracellular solute-binding protein
YP_004487429.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4800 binding-protein-dependent transport systems inner membrane component
YP_004487430.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_4799 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487431.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_4798 LysR family transcriptional regulator
YP_004487432.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_4797 TetR family transcriptional regulator
YP_004487433.1	PFAM: Amino acid permease-associated region; KEGG: dac:Daci_4796 amino acid permease-associated protein
YP_004487434.1	TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: dac:Daci_4795 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004487435.1	PFAM: Aldo/keto reductase; KEGG: dac:Daci_4794 aldo/keto reductase
YP_004487436.1	KEGG: dac:Daci_4793 hypothetical protein
YP_004487437.1	KEGG: dac:Daci_4792 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004487438.1	KEGG: dac:Daci_4791 hypothetical protein
YP_004487439.1	KEGG: dac:Daci_4790 YbaK/EbsC protein; TIGRFAM: Conserved hypothetical protein CHP00011; PFAM: YbaK/aminoacyl-tRNA synthetase associated region
YP_004487440.1	TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: dac:Daci_4789 hypothetical protein; PFAM: Protein of unknown function DUF205
YP_004487441.1	KEGG: dac:Daci_4788 putative transmembrane protein
YP_004487442.1	PFAM: Protein of unknown function DUF350; KEGG: dac:Daci_4787 hypothetical protein
YP_004487443.1	KEGG: dac:Daci_4786 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004487444.1	HAMAP: Spermidine synthase; KEGG: dac:Daci_4785 spermidine synthase; PFAM: Spermine synthase
YP_004487445.1	PFAM: Monooxygenase, FAD-binding; KEGG: dac:Daci_4784 twin-arginine translocation pathway signal protein
YP_004487446.1	KEGG: dac:Daci_4783 putative metal dependent phosphohydrolase
YP_004487447.1	KEGG: dac:Daci_4782 hypothetical protein
YP_004487448.1	KEGG: dac:Daci_4781 putative nucleotide-binding protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520
YP_004487449.1	PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: dac:Daci_4780 UDP-N-acetylenolpyruvoylglucosamine reductase
YP_004487450.1	PFAM: SPW repeat; KEGG: dac:Daci_4779 SPW repeat-containing protein
YP_004487451.1	KEGG: dac:Daci_4778 beta-lactamase domain-containing protein
YP_004487452.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4777 LysR family transcriptional regulator
YP_004487453.1	PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: dac:Daci_4776 argininosuccinate synthase
YP_004487454.1	KEGG: dac:Daci_4775 hypothetical protein; HAMAP: Protein of unknown function DUF1255; PFAM: Protein of unknown function DUF1255
YP_004487455.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: dac:Daci_4774 17 kDa surface antigen
YP_004487456.1	KEGG: dac:Daci_4773 arsenate reductase and related; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like
YP_004487457.1	TIGRFAM: Folylpolyglutamate synthetase; KEGG: dac:Daci_4772 FolC bifunctional protein; PFAM: Mur ligase, C-terminal; Mur ligase, central
YP_004487458.1	PFAM: Sporulation/cell division region, bacteria; KEGG: dac:Daci_4771 sporulation domain-containing protein
YP_004487459.1	PFAM: Colicin V production protein; KEGG: dac:Daci_4770 colicin V production protein
YP_004487460.1	TIGRFAM: Amidophosphoribosyl transferase; KEGG: dac:Daci_4769 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase
YP_004487461.1	KEGG: dac:Daci_4768 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004487462.1	TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: dac:Daci_4767 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004487463.1	KEGG: dac:Daci_4766 hypothetical protein
YP_004487464.1	PFAM: Outer membrane efflux protein; KEGG: dac:Daci_4765 outer membrane efflux protein
YP_004487465.1	KEGG: dac:Daci_4764 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Biotin/lipoyl attachment
YP_004487466.1	KEGG: dac:Daci_4763 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004487467.1	PFAM: Nitrogen regulatory protein PII; KEGG: dac:Daci_4762 nitrogen regulatory protein P-II
YP_004487468.1	KEGG: dac:Daci_4761 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004487469.1	PFAM: MbtH-like protein; KEGG: dac:Daci_4760 MbtH domain-containing protein
YP_004487470.1	PFAM: Thioesterase; KEGG: dac:Daci_4759 thioesterase
YP_004487471.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: dac:Daci_4758 4'-phosphopantetheinyl transferase
YP_004487472.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: dac:Daci_4757 taurine catabolism dioxygenase TauD/TfdA
YP_004487473.1	TIGRFAM: Amino acid adenylation; KEGG: dac:Daci_4756 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain
YP_004487474.1	KEGG: beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Phosphopantetheine-binding
YP_004487475.1	TIGRFAM: Amino acid adenylation; Twin-arginine translocation pathway, signal sequence; Non-ribosomal peptide synthase; KEGG: axy:AXYL_02597 linear gramicidin synthetase subunit C; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding
YP_004487476.1	TIGRFAM: Amino acid adenylation; KEGG: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding
YP_004487477.1	KEGG: amino acid adenylation domain protein; TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Thioesterase
YP_004487478.1	KEGG: axy:AXYL_04923 iron uptake receptor 2; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004487479.1	PFAM: FecR protein; KEGG: dac:Daci_4751 anti-FecI sigma factor FecR
YP_004487480.1	KEGG: dac:Daci_4750 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2
YP_004487481.1	KEGG: dac:Daci_4749 L-lysine 6-monooxygenase
YP_004487482.1	PFAM: Siderophore biosynthesis protein, conserved region; KEGG: dac:Daci_4748 hypothetical protein
YP_004487483.1	KEGG: dac:Daci_4747 alpha/beta hydrolase domain-containing protein
YP_004487484.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Cyclic peptide transporter; KEGG: dac:Daci_4746 cyclic peptide transporter; PFAM: ABC transporter-like
YP_004487485.1	KEGG: dac:Daci_4745 hypothetical protein
YP_004487486.1	KEGG: dac:Daci_4744 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487487.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dac:Daci_4743 extracellular solute-binding protein
YP_004487488.1	KEGG: dac:Daci_4742 phasin family protein; TIGRFAM: Phasin, subfamily 1; PFAM: Phasin
YP_004487489.1	PFAM: Thioesterase superfamily; KEGG: dac:Daci_4741 thioesterase superfamily protein
YP_004487490.1	PFAM: Nicotinate phosphoribosyltransferase-like; TIGRFAM: Nicotinate phosphoribosyltransferase; HAMAP: Nicotinate phosphoribosyltransferase; KEGG: dac:Daci_4740 nicotinate phosphoribosyltransferase
YP_004487491.1	KEGG: dac:Daci_4739 putative transmembrane protein
YP_004487492.1	KEGG: dac:Daci_4738 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004487493.1	PFAM: RmuC; KEGG: dac:Daci_4737 hypothetical protein
YP_004487494.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4736 major facilitator transporter
YP_004487495.1	PFAM: Conserved hypothetical protein CHP00730; KEGG: dac:Daci_4735 hypothetical protein
YP_004487496.1	PFAM: Na+/H+ antiporter subunit; KEGG: dac:Daci_4734 Na+/H+ antiporter subunit
YP_004487497.1	PFAM: Multiple resistance and pH regulation protein F; KEGG: dac:Daci_4733 multiple resistance and pH regulation protein F
YP_004487498.1	PFAM: cation antiporter; KEGG: dac:Daci_4732 putative monovalent cation/H+ antiporter subunit E
YP_004487499.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; KEGG: dac:Daci_4731 putative monovalent cation/H+ antiporter subunit D
YP_004487500.1	PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: dac:Daci_4730 putative monovalent cation/H+ antiporter subunit C
YP_004487501.1	KEGG: dac:Daci_4729 putative monovalent cation/H+ antiporter subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; Na+/H+ antiporter MnhB subunit-related protein; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal
YP_004487502.1	KEGG: dac:Daci_4728 hypothetical protein
YP_004487504.1	KEGG: dac:Daci_4727 tetratricopeptide repeat-containing protein
YP_004487505.1	KEGG: dac:Daci_4726 hypothetical protein
YP_004487506.1	TIGRFAM: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: dac:Daci_4725 integration host factor subunit beta; SMART: Histone-like bacterial DNA-binding protein
YP_004487507.1	KEGG: dac:Daci_4724 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain
YP_004487508.1	PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; Cytidylate kinase region; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; Cytidylate kinase; HAMAP: Cytidylate kinase; 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: dac:Daci_4723 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase
YP_004487509.1	KEGG: dac:Daci_4722 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase
YP_004487510.1	KEGG: dac:Daci_4721 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT
YP_004487511.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: dac:Daci_4720 phosphoserine aminotransferase
YP_004487512.1	SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: dac:Daci_4719 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004487513.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dac:Daci_4718 OmpA/MotB domain-containing protein
YP_004487514.1	PFAM: Methyltransferase type 11; TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: dac:Daci_4717 3-demethylubiquinone-9 3-methyltransferase
YP_004487515.1	TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: dac:Daci_4716 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase
YP_004487516.1	KEGG: dac:Daci_4715 hypothetical protein
YP_004487517.1	KEGG: dac:Daci_4714 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004487518.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dac:Daci_4713 endonuclease/exonuclease/phosphatase
YP_004487519.1	KEGG: dac:Daci_4712 hypothetical protein
YP_004487520.1	KEGG: dac:Daci_4711 ribonuclease H; manually curated; PFAM: Ribonuclease H
YP_004487521.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_4710 glutathione S-transferase domain-containing protein
YP_004487522.1	KEGG: dac:Daci_4709 putative lipoprotein
YP_004487523.1	KEGG: dac:Daci_4661 translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; PFAM: S1, IF1 type
YP_004487524.1	TIGRFAM: Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: dac:Daci_4660 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related
YP_004487525.1	KEGG: dac:Daci_4659 hypothetical protein
YP_004487526.1	HAMAP: Ferredoxin--NADP reductase; KEGG: dac:Daci_4658 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004487527.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dac:Daci_4657 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
YP_004487528.1	TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: dac:Daci_4656 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding
YP_004487529.1	KEGG: dac:Daci_4655 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004487530.1	TIGRFAM: Phosphoadenosine phosphosulphate reductase CysH-type; KEGG: dac:Daci_4654 phosphoadenylyl-sulfate reductase; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004487531.1	PFAM: Uncharacterised conserved protein UCP030820; KEGG: dac:Daci_4653 hypothetical protein
YP_004487532.1	KEGG: dac:Daci_4652 nitrite/sulfite reductase hemoprotein subunit beta; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like
YP_004487533.1	KEGG: dac:Daci_4651 hypothetical protein
YP_004487534.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4650 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487535.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_4649 transport system permease
YP_004487536.1	PFAM: Periplasmic binding protein; KEGG: dac:Daci_4648 periplasmic-binding protein
YP_004487537.1	PFAM: Protein of unknown function DUF2478; KEGG: dac:Daci_4647 molybdenum ABC transporter ATP-binding protein
YP_004487538.1	KEGG: dac:Daci_4646 hypothetical protein
YP_004487539.1	PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: dac:Daci_4645 TonB-dependent receptor
YP_004487540.1	TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal; HAMAP: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; KEGG: dac:Daci_4644 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; Protein of unknown function DUF752
YP_004487541.1	PFAM: Uncharacterised protein family UPF0126; KEGG: dac:Daci_4643 hypothetical protein
YP_004487542.1	KEGG: dac:Daci_4642 hypothetical protein; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX
YP_004487543.1	KEGG: dac:Daci_4641 sulfate ABC transporter periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004487544.1	KEGG: dac:Daci_4640 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: Extracellular solute-binding protein, family 3
YP_004487545.1	TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: dac:Daci_4639 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; SMART: Extracellular solute-binding protein, family 3
YP_004487546.1	TIGRFAM: Alkanesulphonate monooxygenase, FMN-dependent; KEGG: dac:Daci_4638 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup
YP_004487547.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4637 binding-protein-dependent transport systems inner membrane component
YP_004487548.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4636 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487549.1	KEGG: dac:Daci_4635 TOBE domain-containing protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1
YP_004487550.1	PFAM: Protein of unknown function DUF2269, transmembrane; KEGG: dac:Daci_4634 integral membrane protein-like protein
YP_004487551.1	KEGG: dac:Daci_4633 NAD-dependent epimerase/dehydratase
YP_004487552.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: dac:Daci_4632 NAD-dependent epimerase/dehydratase
YP_004487553.1	KEGG: dac:Daci_4631 transcriptional regulator-like protein
YP_004487554.1	KEGG: dac:Daci_4630 hypothetical protein
YP_004487555.1	TIGRFAM: 23S rRNA methyltransferase/RumA; HAMAP: 23S rRNA (uracil-5-)-methyltransferase rumA; KEGG: dac:Daci_4629 23S rRNA 5-methyluridine methyltransferase; PFAM: (Uracil-5)-methyltransferase
YP_004487556.1	KEGG: dac:Daci_4628 hypothetical protein
YP_004487557.1	PFAM: Uncharacterised protein family UPF0005; KEGG: dac:Daci_4627 hypothetical protein
YP_004487558.1	PFAM: Protein of unknown function DUF336; KEGG: dac:Daci_4626 hypothetical protein
YP_004487559.1	PFAM: Hemin uptake protein hemP; KEGG: dac:Daci_4625 hypothetical protein
YP_004487560.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dac:Daci_4624 biopolymer transport protein ExbD/TolR
YP_004487561.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dac:Daci_4623 MotA/TolQ/ExbB proton channel
YP_004487562.1	KEGG: dac:Daci_4622 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein
YP_004487563.1	PFAM: BFD-like [2Fe-2S]-binding region; KEGG: dac:Daci_4621 BFD/(2Fe-2S)-binding domain-containing protein
YP_004487564.1	KEGG: dac:Daci_4620 FMN-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004487565.1	KEGG: dac:Daci_4619 SWIB/MDM2 domain-containing protein; PFAM: SWIB/MDM2 domain; SMART: SWIB domain
YP_004487566.1	KEGG: dac:Daci_4618 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF6, transmembrane
YP_004487567.1	TIGRFAM: Isocitrate lyase; KEGG: dac:Daci_4617 isocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase
YP_004487568.1	KEGG: dac:Daci_4616 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding
YP_004487569.1	PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; manually curated; TIGRFAM: Translation initiation factor 3; KEGG: dac:Daci_4615 translation initiation factor IF-3; HAMAP: Translation initiation factor IF-3
YP_004487570.1	KEGG: dac:Daci_4614 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35; PFAM: Ribosomal protein L35
YP_004487571.1	KEGG: dac:Daci_4613 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; PFAM: Ribosomal protein L20
YP_004487572.1	KEGG: dac:Daci_4612 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal
YP_004487573.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: dac:Daci_4611 phenylalanyl-tRNA synthetase subunit beta
YP_004487574.1	SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, alpha subunit; KEGG: dac:Daci_4610 integration host factor subunit alpha; HAMAP: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein
YP_004487575.1	KEGG: dac:Daci_4609 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004487576.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4608 LysR family transcriptional regulator
YP_004487577.1	KEGG: dac:Daci_4607 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004487578.1	KEGG: dac:Daci_4606 hypothetical protein
YP_004487579.1	KEGG: dac:Daci_4605 YaeC family lipoprotein; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004487580.1	PFAM: Nitroreductase-like; KEGG: dac:Daci_4604 nitroreductase
YP_004487581.1	KEGG: dac:Daci_4603 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004487582.1	KEGG: dac:Daci_4602 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004487583.1	PFAM: BioY protein; KEGG: dac:Daci_4601 BioY protein
YP_004487584.1	PFAM: Cobalt transport protein; KEGG: dac:Daci_4600 cobalt transport protein
YP_004487585.1	KEGG: dac:Daci_4599 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004487586.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4598 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487587.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4597 binding-protein-dependent transport systems inner membrane component
YP_004487588.1	PFAM: NLPA lipoprotein; KEGG: dac:Daci_4596 NlpA lipoprotein
YP_004487589.1	PFAM: NADPH-dependent FMN reductase; KEGG: dac:Daci_4595 NADPH-dependent FMN reductase
YP_004487590.1	KEGG: dac:Daci_4594 hypothetical protein
YP_004487591.1	PFAM: NHL repeat; KEGG: bba:Bd0727 hypothetical protein
YP_004487592.1	KEGG: dac:Daci_4593 NAD(P)H dehydrogenase; HAMAP: FMN-dependent NADH-azoreductase; PFAM: Flavodoxin-like fold
YP_004487593.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4592 LysR family transcriptional regulator
YP_004487594.1	PFAM: Protein of unknown function DUF1234; KEGG: dac:Daci_4591 hypothetical protein
YP_004487595.1	KEGG: dac:Daci_4590 sulfate ABC transporter periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004487596.1	KEGG: dac:Daci_4589 sulfate ABC transporter inner membrane subunit CysT; TIGRFAM: Sulphate ABC transporter, permease protein CysT; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004487597.1	KEGG: dac:Daci_4588 sulfate ABC transporter inner membrane subunit CysW; TIGRFAM: Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004487598.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Sulphate transport system permease protein 1; KEGG: dac:Daci_4587 sulfate ABC transporter ATPase subunit; PFAM: ABC transporter-like
YP_004487599.1	PFAM: Disulphide bond formation protein DsbB; KEGG: dac:Daci_4586 disulphide bond formation protein DsbB
YP_004487600.1	TIGRFAM: Dihydroxyacetone kinase, subunit L; KEGG: dac:Daci_4585 dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase
YP_004487601.1	TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; KEGG: dac:Daci_4584 RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase
YP_004487602.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4583 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487603.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: dac:Daci_4582 periplasmic-binding protein/LacI transcriptional regulator
YP_004487604.1	KEGG: dac:Daci_4581 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487605.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4580 monosaccharide-transporting ATPase
YP_004487606.1	KEGG: dac:Daci_4579 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding
YP_004487607.1	PFAM: Putative sugar-binding region; HTH transcriptional regulator, MarR; KEGG: dac:Daci_4578 DeoR family transcriptional regulator
YP_004487608.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_4577 lysine exporter protein LysE/YggA
YP_004487609.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_4576 glutathione S-transferase domain-containing protein
YP_004487610.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4575 LysR family transcriptional regulator
YP_004487611.1	KEGG: dac:Daci_4574 beta-lactamase; PFAM: Beta-lactamase-related
YP_004487612.1	KEGG: dac:Daci_4573 N-acetylglutamate synthase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase
YP_004487613.1	PFAM: Outer membrane efflux protein; KEGG: dac:Daci_4572 outer membrane efflux protein
YP_004487614.1	PFAM: Secretion protein HlyD; KEGG: dac:Daci_4571 secretion protein HlyD family protein
YP_004487615.1	PFAM: ABC-2 type transporter; KEGG: dac:Daci_4570 ABC-2 type transporter
YP_004487616.1	PFAM: ABC-2 type transporter; KEGG: dac:Daci_4569 ABC-2 type transporter
YP_004487617.1	KEGG: dac:Daci_3559 hypothetical protein
YP_004487618.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4568 major facilitator transporter
YP_004487619.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_4567 LysR family transcriptional regulator
YP_004487620.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4566 amidohydrolase 2
YP_004487621.1	KEGG: dac:Daci_4565 hypothetical protein
YP_004487622.1	KEGG: dac:Daci_4564 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004487623.1	KEGG: dac:Daci_4563 hypothetical protein
YP_004487624.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4562 LysR family transcriptional regulator
YP_004487625.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: dac:Daci_4561 4-oxalocrotonate tautomerase
YP_004487626.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_4560 LysR family transcriptional regulator
YP_004487627.1	KEGG: dac:Daci_4559 DNA ligase III-like protein
YP_004487628.1	KEGG: dac:Daci_4558 metal-dependent phosphohydrolase
YP_004487629.1	KEGG: dac:Daci_4557 hypothetical protein
YP_004487630.1	KEGG: dac:Daci_4556 hypothetical protein
YP_004487631.1	KEGG: dac:Daci_4555 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004487632.1	KEGG: dac:Daci_4554 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004487633.1	KEGG: dac:Daci_4553 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004487634.1	PFAM: Domain of unknown function DUF2394; KEGG: dac:Daci_4552 putative hemagglutinin-related protein
YP_004487635.1	PFAM: Metallophosphoesterase; KEGG: dac:Daci_4551 metallophosphoesterase
YP_004487636.1	SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal; manually curated; KEGG: dac:Daci_4550 ATP-dependent helicase HrpA; TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605
YP_004487637.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_4549 isochorismatase hydrolase
YP_004487640.1	KEGG: nve:NEMVE_v1g225870 hypothetical protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat; RHS protein
YP_004487641.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4548 LysR family transcriptional regulator
YP_004487642.1	KEGG: dac:Daci_4547 hypothetical protein
YP_004487643.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: dac:Daci_4546 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_004487644.1	KEGG: dac:Daci_4545 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004487645.1	PFAM: GCN5-related N-acetyltransferase; KEGG: reu:Reut_B5424 GCN5-related N-acetyltransferase
YP_004487646.1	KEGG: dac:Daci_4544 beta-lactamase; PFAM: Penicillin-binding protein, transpeptidase
YP_004487647.1	KEGG: dac:Daci_4543 hypothetical protein
YP_004487648.1	PFAM: PepSY-associated TM helix; KEGG: axy:AXYL_05501 PepSY-associated TM helix family protein 10
YP_004487649.1	KEGG: axy:AXYL_05502 putative membrane protein 71
YP_004487650.1	KEGG: rru:Rru_A2313 hypothetical protein
YP_004487651.1	KEGG: ctt:CtCNB1_2108 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004487652.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dac:Daci_4542 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004487653.1	PFAM: Transcriptional regulator, Rrf2; KEGG: dac:Daci_4541 BadM/Rrf2 family transcriptional regulator
YP_004487654.1	KEGG: dac:Daci_4540 hypothetical protein
YP_004487655.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_4539 porin
YP_004487656.1	KEGG: dac:Daci_4538 tannase and feruloyl esterase; PFAM: Tannase/feruloyl esterase
YP_004487657.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2
YP_004487658.1	KEGG: dac:Daci_4536 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004487659.1	KEGG: dac:Daci_4535 hypothetical protein
YP_004487660.1	KEGG: dac:Daci_4534 X-Pro dipeptidyl-peptidase domain-containing protein; TIGRFAM: CocE/NonD hydrolase; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S15
YP_004487661.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_4533 TetR family transcriptional regulator
YP_004487662.1	KEGG: dac:Daci_4532 transport protein
YP_004487663.1	PFAM: Acyl-protein synthetase, LuxE; KEGG: dac:Daci_4530 putative acyl protein synthase/acyl-CoA reductase-like protein
YP_004487664.1	PFAM: Acyl-CoA reductase; KEGG: dac:Daci_4529 acyl-CoA reductase
YP_004487665.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4528 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487666.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4527 binding-protein-dependent transport systems inner membrane component
YP_004487667.1	KEGG: dac:Daci_4526 NMT1/THI5-like domain-containing protein
YP_004487668.1	KEGG: dac:Daci_4525 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487669.1	KEGG: dac:Daci_4524 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004487670.1	KEGG: dac:Daci_4523 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004487671.1	PFAM: LysR, substrate-binding; KEGG: dac:Daci_4518 LysR family transcriptional regulator
YP_004487672.1	KEGG: amr:AM1_E0108 hypothetical protein; TIGRFAM: Type 1 secretion, target domain, C-terminal; VCBS repeat domain; PFAM: Haemolysin-type calcium-binding region
YP_004487673.1	KEGG: dac:Daci_4508 hypothetical protein
YP_004487674.1	KEGG: dac:Daci_4507 hypothetical protein
YP_004487675.1	KEGG: dac:Daci_4506 acyl-CoA dehydrogenase domain-containing protein; manually curated; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal
YP_004487676.1	manually curated; PFAM: Diguanylate phosphodiesterase, predicted; GAF; KEGG: dac:Daci_4505 diguanylate phosphodiesterase with GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; GAF
YP_004487677.1	KEGG: ctt:CtCNB1_3776 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004487678.1	KEGG: dac:Daci_4503 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004487679.1	KEGG: dac:Daci_4502 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004487680.1	KEGG: dac:Daci_4501 hypothetical protein
YP_004487681.1	KEGG: dac:Daci_4500 glucose sorbosone dehydrogenase
YP_004487682.1	KEGG: dac:Daci_4499 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004487683.1	manually curated; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: dac:Daci_4498 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004487684.1	PFAM: Male sterility, NAD-binding; KEGG: dac:Daci_4497 hypothetical protein
YP_004487685.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: dac:Daci_4496 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal
YP_004487686.1	PFAM: Protein of unknown function DUF1501; KEGG: dac:Daci_4495 hypothetical protein
YP_004487687.1	PFAM: Protein of unknown function DUF1800; KEGG: dac:Daci_4494 hypothetical protein
YP_004487688.1	KEGG: dac:Daci_4493 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004487689.1	KEGG: dac:Daci_4492 hypothetical protein
YP_004487690.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Cache; KEGG: dac:Daci_4491 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004487691.1	KEGG: dac:Daci_4490 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004487692.1	KEGG: dac:Daci_4489 putative esterase
YP_004487693.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_4488 extracellular ligand-binding receptor
YP_004487694.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4487 inner-membrane translocator
YP_004487695.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4486 inner-membrane translocator
YP_004487696.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4485 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487697.1	KEGG: dac:Daci_4484 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004487698.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Rhs element Vgr protein
YP_004487699.1	KEGG: dac:Daci_0299 YD repeat-containing protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: RHS protein; YD repeat
YP_004487701.1	KEGG: dac:Daci_4475 hypothetical protein
YP_004487702.1	KEGG: dac:Daci_4474 hypothetical protein
YP_004487703.1	KEGG: dac:Daci_4473 hypothetical protein
YP_004487704.1	KEGG: dac:Daci_4472 salicylyl-CoA 5-hydroxylase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Monooxygenase, FAD-binding
YP_004487705.1	KEGG: dac:Daci_4471 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487706.1	PFAM: Crotonase, core; KEGG: dac:Daci_4470 enoyl-CoA hydratase
YP_004487707.1	KEGG: dac:Daci_4469 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004487708.1	KEGG: dac:Daci_4468 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004487709.1	PFAM: Thioesterase superfamily; KEGG: dac:Daci_4467 thioesterase superfamily protein
YP_004487710.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_4466 endoribonuclease L-PSP
YP_004487711.1	PFAM: Histone-like nucleoid-structuring protein H-NS; KEGG: dac:Daci_4465 histone family protein nucleoid-structuring protein H-NS
YP_004487712.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_4464 TetR family transcriptional regulator
YP_004487713.1	KEGG: dac:Daci_4463 hypothetical protein
YP_004487714.1	KEGG: dac:Daci_4462 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004487715.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4461 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487716.1	KEGG: dac:Daci_4460 hypothetical protein
YP_004487717.1	KEGG: dac:Daci_4459 hypothetical protein
YP_004487718.1	PFAM: Ferric-uptake regulator; KEGG: dac:Daci_4458 ferric uptake regulator family protein
YP_004487719.1	KEGG: dac:Daci_4456 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487720.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4455 LysR family transcriptional regulator
YP_004487721.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4454 amidohydrolase 2
YP_004487722.1	KEGG: dac:Daci_4453 hypothetical protein
YP_004487723.1	KEGG: dac:Daci_4452 hypothetical protein
YP_004487724.1	PFAM: PrpF protein; KEGG: dac:Daci_4451 hypothetical protein
YP_004487725.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4450 major facilitator transporter
YP_004487726.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4449 amidohydrolase 2
YP_004487727.1	KEGG: dac:Daci_4448 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
YP_004487728.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4447 amidohydrolase 2
YP_004487729.1	TIGRFAM: Protocatechuate 4,5-dioxygenase, alpha subunit; KEGG: dac:Daci_4446 protocatechuate 4,5-dioxygenase subunit alpha; PFAM: Extradiol ring-cleavage dioxygenase LigAB, LigA subunit
YP_004487730.1	KEGG: dac:Daci_4445 protocatechuate 4,5-dioxygenase subunit beta; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
YP_004487731.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: dac:Daci_4444 oxidoreductase domain-containing protein
YP_004487732.1	KEGG: dac:Daci_4443 4-hydroxyphenylpyruvate dioxygenase
YP_004487733.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: dac:Daci_4442 xylose isomerase domain-containing protein
YP_004487734.1	KEGG: dac:Daci_4441 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004487735.1	KEGG: dac:Daci_4440 hypothetical protein
YP_004487736.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4433 major facilitator transporter
YP_004487737.1	PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: mfe:Mefer_1187 fructose-bisphosphate aldolase
YP_004487738.1	PFAM: 3-dehydroquinate synthase, prokaryotic-type; KEGG: aae:aq_1922 3-dehydroquinate synthase
YP_004487739.1	TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: dps:DP3012 shikimate 5-dehydrogenase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Shikimate dehydrogenase substrate binding, N-terminal
YP_004487740.1	PFAM: Transposase, IS116/IS110/IS902; KEGG: vap:Vapar_0856 transposase IS116/IS110/IS902 family protein
YP_004487741.1	KEGG: dac:Daci_4439 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004487742.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4438 major facilitator transporter
YP_004487743.1	KEGG: dac:Daci_4437 shikimate dehydrogenase substrate-binding subunit; PFAM: UBA/THIF-type NAD/FAD binding fold; Shikimate dehydrogenase substrate binding, N-terminal
YP_004487744.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_4436 porin
YP_004487745.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: dac:Daci_4435 oxidoreductase domain-containing protein
YP_004487746.1	PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: dac:Daci_4434 3-dehydroquinate dehydratase
YP_004487747.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4433 major facilitator transporter
YP_004487748.1	KEGG: dac:Daci_4432 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004487749.1	PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: dac:Daci_4431 6-phosphogluconate dehydrogenase NAD-binding
YP_004487750.1	KEGG: dac:Daci_4430 hypothetical protein
YP_004487751.1	PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_4429 hypothetical protein
YP_004487752.1	KEGG: dac:Daci_4428 hypothetical protein
YP_004487753.1	PFAM: Saccharopine dehydrogenase; KEGG: ctt:CtCNB1_2378 saccharopine dehydrogenase
YP_004487754.1	KEGG: ctt:CtCNB1_2377 hypothetical protein
YP_004487755.1	PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: ctt:CtCNB1_2376 putative thiol-disulphide oxidoreductase DCC
YP_004487756.1	PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; KEGG: dac:Daci_4427 leucyl aminopeptidase
YP_004487757.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dac:Daci_4426 extracellular solute-binding protein
YP_004487758.1	KEGG: dac:Daci_4425 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004487759.1	PFAM: Protein of unknown function DUF156; KEGG: dac:Daci_4424 hypothetical protein
YP_004487760.1	PFAM: Protein of unknown function DUF559; KEGG: dac:Daci_4423 hypothetical protein
YP_004487761.1	KEGG: dac:Daci_4422 hypothetical protein; TIGRFAM: polyphosphate kinase 2; PFAM: Polyphosphate kinase 2
YP_004487762.1	KEGG: dac:Daci_4421 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like
YP_004487763.1	KEGG: dac:Daci_4420 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004487764.1	TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: dac:Daci_4419 nitrilotriacetate monooxygenase
YP_004487765.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4418 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487766.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ctt:CtCNB1_0548 ABC transporter membrane subunit
YP_004487767.1	KEGG: dac:Daci_4416 glycine betaine ABC transporter substrate-binding protein
YP_004487768.1	PFAM: NIPSNAP; KEGG: dac:Daci_4415 NIPSNAP family protein
YP_004487769.1	KEGG: dac:Daci_4414 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004487770.1	PFAM: Protein of unknown function DUF2132; KEGG: lch:Lcho_1422 hypothetical protein
YP_004487771.1	manually curated; KEGG: dac:Daci_4413 hypothetical protein
YP_004487772.1	PFAM: Pentapeptide repeat; KEGG: dac:Daci_4412 pentapeptide repeat-containing protein
YP_004487773.1	PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dac:Daci_4411 anti-sigma-factor antagonist
YP_004487774.1	KEGG: dac:Daci_4410 anti-sigma-factor antagonist
YP_004487775.1	manually curated; PFAM: ATP-binding region, ATPase-like; KEGG: dac:Daci_4409 putative anti-sigma regulatory factor, serine/threonine protein kinase; SMART: ATP-binding region, ATPase-like
YP_004487776.1	KEGG: dac:Daci_4408 putative anti-sigma regulatory factor, serine/threonine protein kinase; manually curated; PFAM: ATP-binding region, ATPase-like; Sporulation stage II, protein E C-terminal
YP_004487777.1	manually curated; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dac:Daci_4407 histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004487778.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; PAS fold; KEGG: dac:Daci_4406 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004487779.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4405 LysR family transcriptional regulator
YP_004487780.1	TIGRFAM: Quinone oxidoreductase putative, PIG3; KEGG: dac:Daci_4404 PIG3 family NAD(P)H quinone oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004487781.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dac:Daci_4403 antibiotic biosynthesis monooxygenase
YP_004487782.1	KEGG: mlo:mlr9262 hypothetical protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985
YP_004487783.1	PFAM: Plasmid stabilisation system; KEGG: mlo:msr9263 hypothetical protein
YP_004487784.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_4402 lysine exporter protein LysE/YggA
YP_004487785.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4401 major facilitator transporter
YP_004487786.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4400 LysR family transcriptional regulator
YP_004487787.1	manually curated; KEGG: dac:Daci_4399 hypothetical protein
YP_004487788.1	PFAM: PRC-barrel; KEGG: dac:Daci_4398 PRC-barrel domain-containing protein
YP_004487789.1	KEGG: dac:Daci_4397 hypothetical protein; HAMAP: UPF0059 membrane protein yebN; PFAM: Protein of unknown function DUF204
YP_004487790.1	KEGG: dac:Daci_4396 GAF sensor-containing diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; GAF; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; GAF; Diguanylate cyclase, predicted
YP_004487791.1	KEGG: dac:Daci_4394 hypothetical protein
YP_004487792.1	PFAM: Metallophosphoesterase; KEGG: dac:Daci_4393 metallophosphoesterase
YP_004487793.1	PFAM: Glycosyl transferase, family 9; KEGG: dac:Daci_4392 glycosyl transferase family protein
YP_004487794.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_4391 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004487795.1	KEGG: dac:Daci_4390 hypothetical protein
YP_004487796.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pna:Pnap_1659 LysR family transcriptional regulator
YP_004487797.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pol:Bpro_0977 major facilitator transporter
YP_004487798.1	KEGG: dac:Daci_4389 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004487799.1	KEGG: dac:Daci_4388 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004487800.1	KEGG: dac:Daci_4387 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004487801.1	PFAM: Monooxygenase, FAD-binding; KEGG: dac:Daci_4386 hypothetical protein
YP_004487802.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_4385 TetR family transcriptional regulator
YP_004487803.1	KEGG: dac:Daci_4384 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004487804.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_4383 short chain dehydrogenase
YP_004487805.1	SMART: HTH transcriptional regulator, ArsR; KEGG: dac:Daci_4382 ArsR family transcriptional regulator
YP_004487806.1	KEGG: dac:Daci_4381 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004487807.1	KEGG: dac:Daci_4380 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein
YP_004487808.1	KEGG: dac:Daci_4379 hypothetical protein
YP_004487809.1	TIGRFAM: Listeria/Bacterioides repeat; KEGG: llo:LLO_3002 transmembrane protein (fibronectin III domain and GP5 C-terminal repeat)
YP_004487810.1	KEGG: dac:Daci_4376 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase
YP_004487811.1	manually curated; KEGG: dac:Daci_4375 GCN5-related N-acetyltransferase
YP_004487812.1	KEGG: dac:Daci_4374 hypothetical protein
YP_004487813.1	KEGG: aav:Aave_4027 PHB depolymerase family esterase; TIGRFAM: Esterase, PHB depolymerase; PFAM: Esterase, PHB depolymerase
YP_004487814.1	KEGG: rcu:RCOM_1970960 hypothetical protein
YP_004487815.1	PFAM: Hly-III related; KEGG: vap:Vapar_3228 channel protein, hemolysin III family
YP_004487817.1	KEGG: pna:Pnap_1315 CRP/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_004487818.1	PFAM: Putative carbohydrate binding; Glycosyltransferase 36; KEGG: pol:Bpro_3667 cyclic beta 1-2 glucan synthetase
YP_004487820.1	KEGG: har:HEAR2625 lipoprotein, osmotically inducible
YP_004487821.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ttr:Tter_2835 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004487822.1	KEGG: rfr:Rfer_1879 hypothetical protein
YP_004487823.1	KEGG: pna:Pnap_1316 cyclic nucleotide-binding domain-containing protein
YP_004487824.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: dac:Daci_4371 glutathione-dependent formaldehyde-activating GFA
YP_004487825.1	manually curated; KEGG: dac:Daci_4370 hypothetical protein
YP_004487826.1	KEGG: dac:Daci_4369 FHA domain-containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated
YP_004487827.1	KEGG: dac:Daci_4368 hypothetical protein; TIGRFAM: bacteriocin biosynthesis cyclodehydratase domain; YcaO-like; PFAM: YcaO-like
YP_004487828.1	KEGG: dac:Daci_4367 polyketide biosynthesis O-methyltransferase-like protein
YP_004487829.1	KEGG: dac:Daci_4366 hypothetical protein
YP_004487830.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: dac:Daci_4365 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Adenylyl cyclase class-3/4/guanylyl cyclase
YP_004487831.1	SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: dac:Daci_4364 low molecular weight phosphotyrosine protein phosphatase
YP_004487832.1	KEGG: rlt:Rleg2_2582 hypothetical protein
YP_004487833.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: dac:Daci_4363 glutathione-dependent formaldehyde-activating GFA
YP_004487834.1	PFAM: Alanine racemase, N-terminal; KEGG: dac:Daci_4362 alanine racemase domain-containing protein
YP_004487835.1	KEGG: dac:Daci_4361 hypothetical protein
YP_004487836.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4360 LysR family transcriptional regulator
YP_004487837.1	TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; KEGG: dac:Daci_4359 IclR family transcriptional regulator; SMART: Transcriptional regulator IclR, N-terminal
YP_004487838.1	TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; KEGG: dac:Daci_4358 4-hydroxybenzoate 3-monooxygenase; PFAM: Monooxygenase, FAD-binding
YP_004487839.1	PFAM: Protein of unknown function DUF2257; KEGG: dac:Daci_4357 hypothetical protein
YP_004487840.1	PFAM: UspA; KEGG: dac:Daci_4356 UspA domain-containing protein
YP_004487841.1	KEGG: dac:Daci_4355 hypothetical protein; TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Haemerythrin/HHE cation-binding motif
YP_004487842.1	KEGG: dac:Daci_4354 hypothetical protein
YP_004487843.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: dac:Daci_4353 allantoate amidohydrolase; PFAM: Peptidase M20
YP_004487844.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; PAS fold-4; KEGG: dac:Daci_4352 multi-sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004487845.1	KEGG: dac:Daci_4351 hypothetical protein
YP_004487846.1	KEGG: dac:Daci_4350 hypothetical protein
YP_004487847.1	KEGG: dac:Daci_4349 hypothetical protein
YP_004487848.1	KEGG: dac:Daci_4348 RNA polymerase sigma 54 subunit RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54
YP_004487849.1	KEGG: dac:Daci_4347 hypothetical protein
YP_004487850.1	KEGG: dac:Daci_4346 transglycosylase-associated protein
YP_004487851.1	KEGG: dac:Daci_4345 hypothetical protein
YP_004487852.1	KEGG: dac:Daci_4344 fis family two component sigma-54-specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004487853.1	KEGG: dac:Daci_4343 putative DNA topoisomerase, type I; manually curated
YP_004487854.1	KEGG: dac:Daci_4342 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive
YP_004487855.1	KEGG: dac:Daci_4341 bifunctional endo-1,4-beta-xylanase XylA precursor
YP_004487856.1	SMART: DNA helicase, ATP-dependent, Ku type; TIGRFAM: Ku, prokaryotic type; KEGG: dac:Daci_4340 Ku protein; HAMAP: DNA repair protein; PFAM: DNA helicase, ATP-dependent, Ku type
YP_004487857.1	KEGG: dac:Daci_4339 ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase region; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, polymerase domain; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; DNA primase, small subunit
YP_004487858.1	KEGG: dac:Daci_4338 hypothetical protein
YP_004487860.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_4337 short-chain dehydrogenase/reductase SDR
YP_004487861.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase; KEGG: dac:Daci_4336 pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004487862.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4335 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004487863.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4334 leucine/isoleucine/valine transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004487864.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4333 leucine/isoleucine/valine transporter permease subunit
YP_004487865.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4332 inner-membrane translocator
YP_004487866.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_4331 extracellular ligand-binding receptor
YP_004487867.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dac:Daci_4330 pseudouridine synthase
YP_004487868.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; KEGG: dac:Daci_4329 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region
YP_004487869.1	TIGRFAM: Glycine cleavage system P-protein; HAMAP: Glycine cleavage system P-protein; KEGG: dac:Daci_4328 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal
YP_004487870.1	KEGG: dac:Daci_4327 glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; PFAM: Glycine cleavage H-protein
YP_004487871.1	TIGRFAM: Glycine cleavage system T protein; KEGG: dac:Daci_4326 glycine cleavage system T protein; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel
YP_004487872.1	KEGG: dac:Daci_4325 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004487873.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4324 LysR family transcriptional regulator
YP_004487874.1	PFAM: Protein of unknown function DUF606; KEGG: dac:Daci_4323 hypothetical protein
YP_004487875.1	KEGG: dac:Daci_4322 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004487876.1	KEGG: dac:Daci_4321 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004487877.1	SMART: Helix-turn-helix, AraC domain; KEGG: dac:Daci_4320 AraC family transcriptional regulator
YP_004487878.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_4319 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004487879.1	PFAM: Amino acid permease-associated region; KEGG: dac:Daci_4318 amino acid permease-associated protein
YP_004487880.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4317 LysR family transcriptional regulator
YP_004487881.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4316 major facilitator transporter
YP_004487882.1	KEGG: dac:Daci_4315 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004487883.1	PFAM: Cupin 2, conserved barrel; KEGG: dac:Daci_4314 cupin 2 domain-containing protein
YP_004487884.1	KEGG: dac:Daci_4313 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004487885.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_4312 inner-membrane translocator
YP_004487886.1	PFAM: ABC transporter substrate binding protein; KEGG: dac:Daci_4311 hypothetical protein
YP_004487887.1	KEGG: dac:Daci_4310 electron-transferring-flavoprotein dehydrogenase; PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004487888.1	PFAM: Thioesterase superfamily; KEGG: dac:Daci_4309 thioesterase superfamily protein
YP_004487889.1	KEGG: aav:Aave_3276 hypothetical protein
YP_004487890.1	KEGG: vei:Veis_3336 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004487891.1	KEGG: vei:Veis_3569 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal
YP_004487892.1	PFAM: Coenzyme A transferase; KEGG: vei:Veis_3570 coenzyme A transferase
YP_004487893.1	KEGG: vei:Veis_3571 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core
YP_004487894.1	KEGG: xtr:100490350 aldehyde dehydrogenase family 2 member C4-like; PFAM: Aldehyde dehydrogenase
YP_004487895.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: vei:Veis_3573 extracellular solute-binding protein
YP_004487896.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3574 binding-protein-dependent transport systems inner membrane component
YP_004487897.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3575 binding-protein-dependent transport systems inner membrane component
YP_004487898.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: vei:Veis_3576 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004487899.1	PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; KEGG: vei:Veis_3577 glucose-methanol-choline oxidoreductase
YP_004487900.1	KEGG: vei:Veis_3578 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487901.1	KEGG: vei:Veis_3579 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_004487902.1	PFAM: Protein of unknown function DUF993; KEGG: vei:Veis_3580 hypothetical protein
YP_004487903.1	TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, subtype; KEGG: dac:Daci_4308 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding
YP_004487904.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4307 LysR family transcriptional regulator
YP_004487905.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: transcriptional regulator LysR family
YP_004487906.1	KEGG: aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004487907.1	PFAM: Major facilitator superfamily MFS-1; KEGG: major facilitator superfamily mfs_1
YP_004487908.1	PFAM: Cupin 2, conserved barrel; Carboxymuconolactone decarboxylase; KEGG: carboxymuconolactone decarboxylase
YP_004487909.1	KEGG: hypothetical protein
YP_004487910.1	PFAM: Dienelactone hydrolase; KEGG: hydrolase of the alpha/beta superfamily protein
YP_004487911.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: dac:Daci_4306 NAD-dependent epimerase/dehydratase
YP_004487912.1	PFAM: ThiJ/PfpI; KEGG: dac:Daci_4305 ThiJ/PfpI domain-containing protein
YP_004487913.1	KEGG: dac:Daci_4304 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004487914.1	KEGG: sme:SM_b21006 hypothetical protein
YP_004487915.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_5738 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004487916.1	KEGG: vap:Vapar_5737 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004487917.1	KEGG: dac:Daci_4303 hypothetical protein
YP_004487918.1	KEGG: dac:Daci_4302 putative transmembrane protein
YP_004487919.1	KEGG: maq:Maqu_3104 hypothetical protein; manually curated; PFAM: Uncharacterised conserved protein UCP037205
YP_004487920.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_4301 FAD dependent oxidoreductase
YP_004487921.1	PFAM: Lipocalin-like; KEGG: dac:Daci_4300 lipocalin family protein
YP_004487922.1	KEGG: dac:Daci_4299 regulatory protein MerR; PFAM: Cobalamin (vitamin B12)-binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004487923.1	KEGG: dac:Daci_4297 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; CHASE3; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004487924.1	KEGG: aba:Acid345_1111 hypothetical protein
YP_004487925.1	TIGRFAM: Dyp-type peroxidase; KEGG: bfo:BRAFLDRAFT_132834 hypothetical protein; PFAM: Dyp-type peroxidase; Pyruvate formate-lyase, PFL
YP_004487926.1	PFAM: Sodium:dicarboxylate symporter; KEGG: dac:Daci_4295 sodium:dicarboxylate symporter
YP_004487927.1	KEGG: dac:Daci_4294 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004487928.1	KEGG: dac:Daci_4293 fis family two component sigma-54-specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004487929.1	KEGG: dac:Daci_4290 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal
YP_004487930.1	KEGG: dac:Daci_4289 hypothetical protein
YP_004487931.1	KEGG: dac:Daci_4288 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004487932.1	KEGG: dac:Daci_4287 N-acetyltransferase; PFAM: N-acetyltransferase
YP_004487933.1	KEGG: dac:Daci_4286 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004487934.1	KEGG: dac:Daci_4285 hypothetical protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004487935.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4284 LysR family transcriptional regulator
YP_004487936.1	KEGG: dac:Daci_4283 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1
YP_004487937.1	PFAM: Protein of unknown function DUF945, bacterial; KEGG: dac:Daci_4282 hypothetical protein
YP_004487938.1	KEGG: dac:Daci_4281 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004487939.1	KEGG: dac:Daci_4280 hypothetical protein
YP_004487940.1	PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_4277 dimethylmenaquinone methyltransferase
YP_004487941.1	KEGG: dac:Daci_4276 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004487942.1	KEGG: dac:Daci_4274 hypothetical protein
YP_004487943.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4273 amidohydrolase 2
YP_004487944.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain-containing protein
YP_004487945.1	PFAM: Transcriptional regulator PadR, C-terminal; Transcriptional regulator PadR N-terminal-like; KEGG: dac:Daci_4271 PadR-like family transcriptional regulator
YP_004487946.1	KEGG: dac:Daci_4270 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004487947.1	KEGG: dac:Daci_4269 hypothetical protein
YP_004487948.1	KEGG: dac:Daci_4268 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive
YP_004487949.1	TIGRFAM: PAS; PFAM: Transcription regulator LuxR, C-terminal; PAS fold; KEGG: dac:Daci_4267 LuxR family transcriptional regulator; SMART: Transcription regulator LuxR, C-terminal; PAS
YP_004487950.1	TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: dac:Daci_4266 3-oxoacid CoA-transferase subunit A; PFAM: Coenzyme A transferase
YP_004487951.1	TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: dac:Daci_4265 3-oxoacid CoA-transferase subunit B; PFAM: Coenzyme A transferase
YP_004487952.1	PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dac:Daci_4264 metal dependent phosphohydrolase
YP_004487953.1	KEGG: dac:Daci_4263 hypothetical protein
YP_004487954.1	KEGG: dac:Daci_4262 hypothetical protein
YP_004487955.1	KEGG: dac:Daci_4261 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: DNA polymerase III, alpha subunit; HAMAP: Error-prone DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004487956.1	KEGG: dac:Daci_4260 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0066; PFAM: Uncharacterised protein family UPF0066
YP_004487957.1	PFAM: HTH transcriptional regulator, LysR; KEGG: dac:Daci_4259 ModE family transcriptional regulator
YP_004487958.1	PFAM: AsmA; KEGG: dac:Daci_4258 AsmA family protein
YP_004487959.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4257 major facilitator transporter
YP_004487960.1	PFAM: Major facilitator superfamily MFS-1; KEGG: psb:Psyr_2187 major facilitator transporter
YP_004487961.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: pfs:PFLU1493 hypothetical protein
YP_004487962.1	PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: dac:Daci_4256 hypothetical protein
YP_004487963.1	KEGG: dac:Daci_4255 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004487964.1	KEGG: dac:Daci_4254 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004487965.1	KEGG: dac:Daci_4253 hypothetical protein
YP_004487966.1	TIGRFAM: Protein of unknown function DUF132; KEGG: dac:Daci_4252 hypothetical protein
YP_004487967.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dac:Daci_4251 pseudouridine synthase
YP_004487968.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_4250 TetR family transcriptional regulator
YP_004487969.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4249 major facilitator transporter
YP_004487970.1	PFAM: Secretion protein HlyD; KEGG: dac:Daci_4248 secretion protein HlyD family protein
YP_004487971.1	KEGG: dac:Daci_4247 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004487972.1	PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase Fe4S4 region; KEGG: dac:Daci_4246 molybdopterin dinucleotide-binding region
YP_004487973.1	PFAM: Polysulphide reductase, NrfD; KEGG: dac:Daci_4245 polysulphide reductase NrfD
YP_004487974.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dac:Daci_4244 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
YP_004487975.1	KEGG: dac:Daci_4243 hypothetical protein
YP_004487976.1	KEGG: dac:Daci_4242 hypothetical protein
YP_004487977.1	KEGG: dac:Daci_4241 disulfide isomerase/thiol-disulfide oxidase
YP_004487978.1	PFAM: Redoxin; KEGG: dac:Daci_4240 redoxin domain-containing protein
YP_004487979.1	PFAM: Major facilitator superfamily MFS-1; KEGG: eca:ECA1817 transporter
YP_004487980.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: eca:ECA1819 TetR family transcriptional regulator
YP_004487981.1	KEGG: dac:Daci_4239 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004487982.1	KEGG: dac:Daci_4238 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004487983.1	PFAM: Cytochrome c, class I; KEGG: dac:Daci_4237 class I cytochrome c
YP_004487984.1	PFAM: Cytochrome c, class I; KEGG: dac:Daci_4236 class I cytochrome c
YP_004487985.1	KEGG: dac:Daci_4235 hypothetical protein
YP_004487986.1	PFAM: Ferric-uptake regulator; KEGG: dac:Daci_4234 ferric uptake regulator family protein
YP_004487987.1	PFAM: Nitroreductase-like; KEGG: dac:Daci_4233 nitroreductase
YP_004487988.1	KEGG: dac:Daci_4232 polyketide biosynthesis O-methyltransferase-like protein
YP_004487989.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_4231 isochorismatase hydrolase
YP_004487990.1	KEGG: dac:Daci_4230 hypothetical protein
YP_004487991.1	KEGG: dac:Daci_4229 hypothetical protein
YP_004487992.1	PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: dac:Daci_4228 hypothetical protein
YP_004487993.1	KEGG: dac:Daci_4227 hypothetical protein
YP_004487994.1	KEGG: dac:Daci_4226 azurin; TIGRFAM: Azurin, proteobacteria; PFAM: Blue (type 1) copper domain
YP_004487995.1	KEGG: dac:Daci_4225 hypothetical protein
YP_004487996.1	PFAM: Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA synthetase, class IIc, N-terminal; KEGG: dac:Daci_4224 threonyl/alanyl tRNA synthetase SAD
YP_004487997.1	KEGG: mau:Micau_3453 WGR domain-containing protein
YP_004487998.1	KEGG: ami:Amir_1890 hypothetical protein
YP_004487999.1	KEGG: mau:Micau_3453 WGR domain-containing protein
YP_004488000.1	PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: mau:Micau_3452 ATPase
YP_004488001.1	KEGG: bbe:BBR47_27150 hypothetical protein
YP_004488002.1	KEGG: alv:Alvin_2776 VWA containing CoxE family protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A
YP_004488003.1	KEGG: vap:Vapar_6232 zinc finger SWIM domain protein
YP_004488005.1	KEGG: dac:Daci_4222 hypothetical protein
YP_004488006.1	KEGG: dac:Daci_4221 hypothetical protein
YP_004488007.1	manually curated; KEGG: dac:Daci_4220 hypothetical protein
YP_004488008.1	KEGG: dac:Daci_4219 hypothetical protein
YP_004488010.1	KEGG: dac:Daci_4218 hypothetical protein
YP_004488011.1	PFAM: Protein of unknown function DUF1501; KEGG: dac:Daci_4217 hypothetical protein
YP_004488012.1	PFAM: Protein of unknown function DUF1800; KEGG: dac:Daci_4216 hypothetical protein
YP_004488013.1	KEGG: dac:Daci_4215 putative membrane-associated protein
YP_004488014.1	KEGG: dac:Daci_4214 hypothetical protein
YP_004488015.1	KEGG: dac:Daci_4213 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004488016.1	KEGG: dac:Daci_4212 hypothetical protein
YP_004488017.1	KEGG: dac:Daci_4138 integrase family protein; manually curated; PFAM: Integrase, catalytic core, phage
YP_004488018.1	PFAM: Prophage CP4-57 regulatory; KEGG: dac:Daci_4137 phage transcriptional regulator AlpA
YP_004488020.1	KEGG: dac:Daci_4706 hypothetical protein
YP_004488021.1	PFAM: DNA methylase N-4/N-6; KEGG: modification methylase
YP_004488022.1	PFAM: BLUF; KEGG: dac:Daci_4395 BLUF domain-containing protein
YP_004488023.1	KEGG: dac:Daci_4128 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004488024.1	KEGG: mei:Msip34_1663 hypothetical protein
YP_004488026.1	KEGG: bph:Bphy_7123 RecT protein; TIGRFAM: DNA single-strand annealing protein RecT; PFAM: DNA single-strand annealing protein RecT-like
YP_004488027.1	PFAM: YqaJ viral recombinase family; KEGG: ppf:Pput_1922 hypothetical protein
YP_004488030.1	KEGG: dac:Daci_1920 hypothetical protein
YP_004488032.1	PFAM: Excalibur calcium-binding domain; KEGG: app:CAP2UW1_3523 cold-shock DNA-binding protein family
YP_004488035.1	manually curated; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: vap:Vapar_2713 transcriptional regulator, XRE family; SMART: Helix-turn-helix type 3
YP_004488040.1	KEGG: etw:ECSP_1092 hypothetical protein
YP_004488041.1	PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: DnaB domain protein helicase domain protein
YP_004488042.1	PFAM: Endodeoxyribonuclease, RusA-like; KEGG: ppg:PputGB1_1739 endodeoxyribonuclease RusA
YP_004488043.1	KEGG: dac:Daci_3226 hypothetical protein
YP_004488045.1	KEGG: hypothetical protein
YP_004488046.1	KEGG: vex:VEA_003170 hypothetical protein
YP_004488047.1	KEGG: hypothetical protein
YP_004488048.1	KEGG: ngo:NGO1098 putative phage associated protein; TIGRFAM: Phage terminase, large subunit, PBSX; PFAM: Phage terminase large subunit; Protein of unknown function DUF1545
YP_004488049.1	KEGG: hsm:HSM_0898 hypothetical protein
YP_004488051.1	KEGG: cbr:CBG02561 Hypothetical protein CBG02561
YP_004488052.1	KEGG: hso:HS_1377 hypothetical protein
YP_004488054.1	KEGG: hypothetical protein
YP_004488055.1	KEGG: vap:Vapar_5313 hypothetical protein
YP_004488056.1	KEGG: dac:Daci_3551 hypothetical protein
YP_004488058.1	KEGG: set:SEN1945 phage membrane protein
YP_004488059.1	KEGG: set:SEN1946 exported phage protein
YP_004488061.1	KEGG: aav:Aave_1765 hypothetical protein
YP_004488062.1	KEGG: dac:Daci_4128 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004488063.1	KEGG: dac:Daci_0493 hypothetical protein
YP_004488064.1	KEGG: eic:NT01EI_1990 hypothetical protein
YP_004488067.1	KEGG: hypothetical protein
YP_004488068.1	KEGG: hypothetical protein
YP_004488069.1	KEGG: aav:Aave_1713 hypothetical protein
YP_004488072.1	KEGG: hypothetical protein
YP_004488075.1	KEGG: aav:Aave_1722 hypothetical protein
YP_004488076.1	KEGG: msv:Mesil_1222 hypothetical protein
YP_004488077.1	KEGG: mca:MCA2930 prophage MuMc02, head decoration protein, putative
YP_004488079.1	KEGG: ols:Olsu_1199 hypothetical protein
YP_004488080.1	KEGG: aav:Aave_1728 hypothetical protein
YP_004488081.1	KEGG: dac:Daci_2640 prophage LambdaSo, lysozyme
YP_004488082.1	PFAM: Protein of unknown function DUF2514; KEGG: dac:Daci_2639 hypothetical protein
YP_004488083.1	KEGG: rcu:RCOM_1915440 hypothetical protein
YP_004488084.1	KEGG: dia:Dtpsy_0852 hypothetical protein
YP_004488085.1	PFAM: Isochorismatase-like; KEGG: dia:Dtpsy_0853 isochorismatase hydrolase
YP_004488086.1	KEGG: dia:Dtpsy_0854 hypothetical protein
YP_004488088.1	KEGG: dac:Daci_4668 hypothetical protein
YP_004488089.1	KEGG: dac:Daci_4667 hypothetical protein
YP_004488090.1	KEGG: dac:Daci_4666 hypothetical protein
YP_004488091.1	PFAM: Pathogenesis-related transcriptional factor/ERF, DNA-binding; KEGG: bbr:BB3494 hypothetical protein
YP_004488092.1	KEGG: dac:Daci_4665 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF159
YP_004488093.1	PFAM: Protein of unknown function DUF333; KEGG: dac:Daci_4072 hypothetical protein
YP_004488094.1	KEGG: dac:Daci_4071 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004488096.1	KEGG: aav:Aave_1673 hypothetical protein
YP_004488097.1	PFAM: Methyltransferase type 11; KEGG: dac:Daci_4070 type 11 methyltransferase
YP_004488098.1	KEGG: dac:Daci_4069 hypothetical protein
YP_004488099.1	KEGG: dac:Daci_4068 hypothetical protein
YP_004488100.1	KEGG: dac:Daci_4067 hypothetical protein
YP_004488101.1	KEGG: dac:Daci_4066 hypothetical protein
YP_004488102.1	manually curated
YP_004488103.1	PFAM: Cytochrome oxidase assembly; KEGG: dac:Daci_4065 cytochrome oxidase assembly
YP_004488104.1	KEGG: dac:Daci_4064 protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; PFAM: UbiA prenyltransferase
YP_004488105.1	KEGG: dac:Daci_4063 two component fis family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region
YP_004488106.1	KEGG: dac:Daci_4062 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_004488107.1	PFAM: Surfeit locus 1; KEGG: dac:Daci_4061 surfeit locus 1 family protein
YP_004488108.1	KEGG: dac:Daci_4060 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: Cytochrome C oxidase subunit IV prokaryotic
YP_004488109.1	KEGG: dac:Daci_4059 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III
YP_004488110.1	TIGRFAM: Cytochrome o ubiquinol oxidase, subunit I; KEGG: dac:Daci_4058 cytochrome o ubiquinol oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I
YP_004488111.1	KEGG: dac:Daci_4057 ubiquinol oxidase subunit II; TIGRFAM: Cytochrome o ubiquinol oxidase subunit II; PFAM: COX aromatic rich; Cytochrome c oxidase subunit II C-terminal
YP_004488112.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4056 major facilitator transporter
YP_004488113.1	KEGG: dac:Daci_4055 hypothetical protein
YP_004488114.1	KEGG: dac:Daci_4054 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1
YP_004488115.1	KEGG: dac:Daci_4053 periplasmic sugar-binding protein
YP_004488116.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: dac:Daci_4052 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004488117.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_4051 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004488118.1	KEGG: dac:Daci_4050 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase
YP_004488119.1	TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; KEGG: dac:Daci_4049 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004488120.1	PFAM: Amine oxidase; KEGG: dac:Daci_4048 FAD dependent oxidoreductase
YP_004488121.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4047 LysR family transcriptional regulator
YP_004488122.1	PFAM: Pirin, N-terminal; KEGG: dac:Daci_4046 pirin domain-containing protein
YP_004488123.1	PFAM: DoxX; KEGG: dac:Daci_4045 DoxX family protein
YP_004488124.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: dac:Daci_4044 flavodoxin/nitric oxide synthase
YP_004488125.1	KEGG: dac:Daci_4043 rhodanese domain-containing protein; HAMAP: UPF0176 protein yceA; SMART: Rhodanese-like
YP_004488126.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dac:Daci_4042 cobyrinic acid ac-diamide synthase
YP_004488127.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_4041 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004488128.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dac:Daci_4040 sulphate transporter
YP_004488129.1	KEGG: dac:Daci_4039 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria
YP_004488130.1	KEGG: dac:Daci_4038 Cys/Met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004488131.1	KEGG: dac:Daci_4037 alkaline phosphatase; PFAM: Alkaline phosphatase D-related
YP_004488132.1	PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: dac:Daci_4036 integral membrane protein
YP_004488133.1	KEGG: vei:Veis_3411 hypothetical protein
YP_004488134.1	KEGG: dac:Daci_4035 arylesterase; PFAM: Lipase, GDSL
YP_004488135.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4034 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488136.1	KEGG: dac:Daci_4033 serine/threonine transporter SstT; HAMAP: Serine/threonine transporter sstT; PFAM: Sodium:dicarboxylate symporter
YP_004488137.1	KEGG: dac:Daci_4032 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding
YP_004488138.1	PFAM: Protein of unknown function DUF1428; KEGG: dac:Daci_4031 hypothetical protein
YP_004488139.1	PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: dac:Daci_4030 activator of HSP90 ATPase 1 family protein
YP_004488140.1	KEGG: dac:Daci_4029 hypothetical protein
YP_004488141.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_4028 3-demethylubiquinone-9 3-methyltransferase
YP_004488142.1	PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: dac:Daci_4027 3-demethylubiquinone-9 3-methyltransferase
YP_004488143.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_4026 TetR family transcriptional regulator
YP_004488144.1	KEGG: dac:Daci_4025 silent information regulator protein Sir2; HAMAP: NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2
YP_004488145.1	PFAM: Aldo/keto reductase; KEGG: dac:Daci_4024 aldo/keto reductase
YP_004488146.1	PFAM: Chromate transporter region; KEGG: dac:Daci_4023 chromate transporter
YP_004488147.1	PFAM: Chromate transporter region; KEGG: dac:Daci_4022 chromate transporter
YP_004488148.1	KEGG: dac:Daci_4019 ABC transporter; PFAM: ABC transporter, N-terminal; ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004488149.1	KEGG: dac:Daci_4018 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004488150.1	KEGG: dac:Daci_4017 hypothetical protein
YP_004488151.1	KEGG: dac:Daci_4016 hypothetical protein
YP_004488152.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_4014 LysR family transcriptional regulator
YP_004488153.1	KEGG: dac:Daci_4013 hypothetical protein
YP_004488154.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dac:Daci_4012 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004488155.1	PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: dac:Daci_4011 hypothetical protein
YP_004488156.1	KEGG: dac:Daci_4010 hypothetical protein
YP_004488157.1	KEGG: dac:Daci_4009 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004488158.1	KEGG: dac:Daci_4008 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding
YP_004488159.1	KEGG: dac:Daci_4007 hypothetical protein
YP_004488160.1	KEGG: dac:Daci_4006 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004488161.1	HAMAP: UPF0313 protein ygiQ; PFAM: Radical SAM N-terminal; Radical SAM; KEGG: dac:Daci_4005 radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB
YP_004488162.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dac:Daci_4004 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS
YP_004488163.1	PFAM: CoA-transferase family III; KEGG: dac:Daci_4003 L-carnitine dehydratase/bile acid-inducible protein F
YP_004488164.1	KEGG: dac:Daci_4002 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/II
YP_004488165.1	SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: dac:Daci_4001 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein
YP_004488166.1	KEGG: dac:Daci_4000 BadM/Rrf2 family transcriptional regulator; TIGRFAM: ISC system FeS cluster assembly, IscR transcription factor; Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2
YP_004488167.1	TIGRFAM: Cysteine desulfurase; KEGG: dac:Daci_3999 cysteine desulfurase IscS; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004488168.1	KEGG: dac:Daci_3998 FeS cluster assembly scaffold IscU; TIGRFAM: ISC system FeS cluster assembly, IscU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal
YP_004488169.1	KEGG: dac:Daci_3997 iron-sulfur cluster assembly protein IscA; TIGRFAM: ISC system FeS cluster assembly, IscA scaffold; FeS cluster insertion; PFAM: FeS cluster biogenesis
YP_004488170.1	TIGRFAM: Co-chaperone Hsc20; HAMAP: Co-chaperone protein hscB; KEGG: dac:Daci_3996 co-chaperone Hsc20; PFAM: Heat shock cognate protein B, C-terminal oligomerisation; Heat shock protein DnaJ, N-terminal
YP_004488171.1	TIGRFAM: ISC system FeS cluster assembly, HscA chaperone; HAMAP: ISC system FeS cluster assembly, HscA chaperone; KEGG: dac:Daci_3995 chaperone protein HscA; PFAM: Heat shock protein 70
YP_004488172.1	KEGG: dac:Daci_3994 2Fe-2S type ferredoxin; TIGRFAM: Ferredoxin, 2Fe-2S type; PFAM: Ferredoxin
YP_004488173.1	SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: dac:Daci_3993 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_004488174.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_3992 2-hydroxyglutarate dehydrogenase
YP_004488175.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: dac:Daci_3991 hypothetical protein
YP_004488176.1	KEGG: dac:Daci_3990 hypothetical protein
YP_004488177.1	KEGG: dac:Daci_3989 hypothetical protein
YP_004488178.1	PFAM: Dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase; KEGG: dac:Daci_3988 dihydroorotate dehydrogenase 2
YP_004488179.1	PFAM: Ribose 5-phosphate isomerase; TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: dac:Daci_3987 ribose-5-phosphate isomerase A
YP_004488180.1	KEGG: dac:Daci_3986 hypothetical protein
YP_004488181.1	PFAM: Glutaredoxin; KEGG: dac:Daci_3985 glutaredoxin
YP_004488182.1	KEGG: dac:Daci_3984 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_004488183.1	HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: dac:Daci_3983 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004488184.1	KEGG: dac:Daci_3982 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004488185.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: dac:Daci_3981 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif
YP_004488186.1	TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: dac:Daci_3980 pyruvate dehydrogenase subunit E1; PFAM: Transketolase, N-terminal
YP_004488187.1	TIGRFAM: Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex; KEGG: dac:Daci_3979 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004488188.1	KEGG: dac:Daci_3978 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004488189.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3977 LysR family transcriptional regulator
YP_004488190.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_3976 lysine exporter protein LysE/YggA
YP_004488191.1	KEGG: pop:POPTR_792102 hypothetical protein
YP_004488192.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3974 major facilitator transporter
YP_004488193.1	KEGG: dac:Daci_3973 hypothetical protein
YP_004488194.1	PFAM: Uncharacterised protein family UPF0310; KEGG: dac:Daci_3972 hypothetical protein
YP_004488195.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_3971 glutathione S-transferase domain-containing protein
YP_004488196.1	KEGG: dac:Daci_3970 hypothetical protein
YP_004488197.1	KEGG: dac:Daci_3969 transglycosylase-associated protein
YP_004488198.1	PFAM: NLP/P60; KEGG: dac:Daci_3968 NLP/P60 protein
YP_004488199.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_3967 isochorismatase hydrolase
YP_004488200.1	KEGG: dac:Daci_3966 opacity protein and related surface antigens-like protein
YP_004488201.1	TIGRFAM: Propionate--CoA ligase; KEGG: dac:Daci_3965 propionyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004488202.1	KEGG: dac:Daci_3964 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004488203.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: dac:Daci_3963 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
YP_004488204.1	PFAM: PilT protein, N-terminal; KEGG: dac:Daci_3962 PilT domain-containing protein
YP_004488205.1	TIGRFAM: Prevent-host-death protein; KEGG: dac:Daci_3961 prevent-host-death family protein
YP_004488206.1	KEGG: dac:Daci_3960 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004488207.1	KEGG: dac:Daci_3959 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004488208.1	KEGG: dac:Daci_3958 TolC family type I secretion outer membrane protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_004488209.1	SMART: Rhodanese-like; KEGG: dac:Daci_3957 rhodanese domain-containing protein
YP_004488210.1	KEGG: dac:Daci_3956 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004488211.1	PFAM: Acriflavin resistance protein; KEGG: dac:Daci_3955 acriflavin resistance protein
YP_004488212.1	KEGG: dac:Daci_3954 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004488213.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_3953 TetR family transcriptional regulator
YP_004488214.1	KEGG: eta:ETA_pET450280 TraI protein; TIGRFAM: Conjugative relaxase region, N-terminal; PFAM: TrwC relaxase
YP_004488215.1	KEGG: bvi:Bcep1808_2670 type IV secretory pathway VirD4 components-like protein
YP_004488217.1	KEGG: bvi:Bcep1808_2673 hypothetical protein
YP_004488223.1	KEGG: bvi:Bcep1808_2684 hypothetical protein
YP_004488224.1	PFAM: Integrase, catalytic core, phage; KEGG: rpf:Rpic12D_0783 integrase family protein
YP_004488225.1	PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: dac:Daci_3952 peptide methionine sulfoxide reductase
YP_004488226.1	KEGG: dac:Daci_3951 ferric uptake regulator family protein
YP_004488227.1	KEGG: dac:Daci_3950 hypothetical protein
YP_004488228.1	KEGG: dac:Daci_3949 hypothetical protein
YP_004488229.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_3948 TonB-dependent receptor
YP_004488230.1	KEGG: dac:Daci_3947 integrase family protein
YP_004488231.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: dac:Daci_3946 pirin domain-containing protein
YP_004488232.1	PFAM: Auxin efflux carrier; KEGG: dac:Daci_3945 auxin efflux carrier
YP_004488233.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: dac:Daci_3944 pyridoxamine 5'-phosphate oxidase
YP_004488234.1	KEGG: dac:Daci_3943 hypothetical protein
YP_004488235.1	KEGG: rcu:RCOM_1899490 hypothetical protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004488236.1	KEGG: reh:H16_B0742 extra-cytoplasmic solute receptor
YP_004488237.1	KEGG: ctt:CtCNB1_1596 aldehyde oxidase and xanthine dehydrogenase; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004488238.1	KEGG: reu:Reut_B3595 molybdopterin dehydrogenase, FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal
YP_004488239.1	KEGG: ctt:CtCNB1_1594 (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding; Ferredoxin
YP_004488240.1	PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: ctt:CtCNB1_1593 carbon monoxide dehydrogenase subunit G
YP_004488241.1	PFAM: Superoxide dismutase, copper/zinc binding; KEGG: dac:Daci_3942 superoxide dismutase copper/zinc-binding
YP_004488242.1	KEGG: dac:Daci_3941 ChaC family protein; manually curated; PFAM: ChaC-like protein
YP_004488243.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dac:Daci_3940 OmpA/MotB domain-containing protein
YP_004488244.1	TIGRFAM: Glyoxalase I; KEGG: dac:Daci_3939 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004488245.1	KEGG: dac:Daci_3938 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004488246.1	KEGG: dac:Daci_3937 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004488247.1	KEGG: dac:Daci_3936 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal
YP_004488248.1	PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: dac:Daci_3935 Hpt domain-containing protein
YP_004488249.1	KEGG: dac:Daci_3934 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004488250.1	KEGG: dac:Daci_3933 hypothetical protein
YP_004488251.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: dac:Daci_3931 2Fe-2S iron-sulfur cluster-binding domain-containing protein
YP_004488252.1	KEGG: dac:Daci_3930 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
YP_004488253.1	KEGG: dac:Daci_3929 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004488254.1	PFAM: Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_3928 acyl-CoA dehydrogenase
YP_004488255.1	KEGG: dac:Daci_3927 TetR family transcriptional regulator; manually curated; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
YP_004488256.1	PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: dac:Daci_3926 xylose isomerase domain-containing protein
YP_004488257.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_3925 alpha/beta hydrolase fold protein
YP_004488258.1	KEGG: dac:Daci_3924 alpha/beta hydrolase domain-containing protein
YP_004488259.1	KEGG: dac:Daci_3923 hypothetical protein
YP_004488260.1	KEGG: dac:Daci_3922 hypothetical protein
YP_004488261.1	PFAM: Nitroreductase-like; KEGG: dac:Daci_3921 nitroreductase
YP_004488262.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3916 LysR family transcriptional regulator
YP_004488263.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_3915 hypothetical protein
YP_004488264.1	PFAM: Aminotransferase, class I/II; KEGG: dac:Daci_3914 aspartate aminotransferase
YP_004488265.1	KEGG: dac:Daci_3913 YidE/YbjL domain-containing protein; TIGRFAM: aspartate-alanine antiporter; YidE/YbjL duplication; PFAM: YidE/YbjL duplication; Regulator of K+ conductance, C-terminal
YP_004488266.1	PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: app:CAP2UW1_1334 hypothetical protein
YP_004488267.1	KEGG: dac:Daci_6042 glycerophosphoryl diester phosphodiesterase; manually curated; PFAM: Glycerophosphoryl diester phosphodiesterase
YP_004488268.1	KEGG: dac:Daci_3912 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004488269.1	KEGG: dac:Daci_3911 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase
YP_004488270.1	KEGG: dac:Daci_3910 hypothetical protein
YP_004488271.1	KEGG: dac:Daci_3909 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004488272.1	manually curated; KEGG: dac:Daci_3908 hypothetical protein
YP_004488273.1	manually curated; KEGG: dac:Daci_3903 hypothetical protein
YP_004488274.1	KEGG: dac:Daci_3902 hypothetical protein
YP_004488275.1	PFAM: Protein of unknown function DUF1232; KEGG: dac:Daci_3901 hypothetical protein
YP_004488277.1	KEGG: acp:A2cp1_3696 hypothetical protein
YP_004488278.1	KEGG: bpr:GBP346_A0024 hypothetical protein
YP_004488279.1	PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: dac:Daci_3899 restriction endonuclease
YP_004488280.1	KEGG: dac:Daci_3898 hypothetical protein
YP_004488281.1	KEGG: dac:Daci_3897 hypothetical protein
YP_004488282.1	KEGG: dac:Daci_3896 hypothetical protein
YP_004488283.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3895 major facilitator transporter
YP_004488284.1	KEGG: dac:Daci_3893 OsmC family protein; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; PFAM: Peroxiredoxin, OsmC-like protein
YP_004488285.1	KEGG: aav:Aave_2435 azurin; TIGRFAM: Azurin, proteobacteria; PFAM: Blue (type 1) copper domain
YP_004488286.1	PFAM: ABC transporter-like; KEGG: kpu:KP1_1439 putative siderophore ABC transport system ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004488287.1	PFAM: Bacterial transport system permease protein; KEGG: cvi:CV_1488 ferric citrate transport system permease protein
YP_004488288.1	PFAM: Periplasmic binding protein; KEGG: bur:Bcep18194_C7105 ABC Fe3+-hydroxamate transporter, periplasmic ligand binding protein
YP_004488289.1	KEGG: hse:Hsero_4380 TonB-dependent receptor for iron transport protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004488290.1	KEGG: hse:Hsero_4381 two component transcription regulator protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004488291.1	KEGG: hse:Hsero_4382 two component sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004488292.1	KEGG: dac:Daci_3892 zinc metalloproteinase Mpr protein
YP_004488293.1	KEGG: bbr:BB2323 putative transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004488294.1	KEGG: bbr:BB2323 putative transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004488296.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: dac:Daci_3891 flavin reductase domain-containing protein
YP_004488297.1	KEGG: dac:Daci_3890 hypothetical protein
YP_004488298.1	KEGG: dac:Daci_3889 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004488299.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_3888 TetR family transcriptional regulator
YP_004488300.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3887 LysR family transcriptional regulator
YP_004488301.1	KEGG: dac:Daci_3886 hypothetical protein
YP_004488302.1	KEGG: dac:Daci_3885 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004488303.1	KEGG: dac:Daci_3884 hypothetical protein
YP_004488304.1	TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; KEGG: dac:Daci_3883 molybdenum ABC transporter periplasmic molybdate-binding protein
YP_004488305.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_3882 binding-protein-dependent transport systems inner membrane component
YP_004488306.1	KEGG: dac:Daci_3881 hypothetical protein
YP_004488308.1	KEGG: dac:Daci_3880 hypothetical protein
YP_004488309.1	PFAM: YD repeat; KEGG: dac:Daci_3879 hypothetical protein
YP_004488310.1	KEGG: mno:Mnod_8290 hypothetical protein
YP_004488312.1	KEGG: aav:Aave_2133 hypothetical protein
YP_004488313.1	manually curated; KEGG: aav:Aave_2132 hypothetical protein
YP_004488314.1	KEGG: aav:Aave_2130 hypothetical protein
YP_004488315.1	KEGG: dac:Daci_3870 hypothetical protein
YP_004488316.1	PFAM: Protein of unknown function DUF2169; KEGG: dac:Daci_3869 hypothetical protein
YP_004488317.1	KEGG: dac:Daci_3868 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Rhs element Vgr protein
YP_004488318.1	KEGG: dac:Daci_3867 hypothetical protein
YP_004488319.1	KEGG: xtr:100496599 hypothetical protein LOC100496599
YP_004488320.1	KEGG: dac:Daci_3866 hypothetical protein
YP_004488321.1	KEGG: dac:Daci_3865 peptidase S41; PFAM: Peptidase S41; SMART: Peptidase S41
YP_004488322.1	TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: dac:Daci_3864 type VI secretion ATPase; SMART: ATPase, AAA+ type, core
YP_004488323.1	manually curated; KEGG: dac:Daci_3863 hypothetical protein
YP_004488324.1	manually curated; KEGG: dac:Daci_3862 hypothetical protein
YP_004488325.1	KEGG: dac:Daci_3861 hypothetical protein
YP_004488326.1	KEGG: dac:Daci_3860 type VI secretion protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305
YP_004488327.1	KEGG: dac:Daci_3859 type VI secretion protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110
YP_004488328.1	KEGG: dac:Daci_3858 type VI secretion system lysozyme-related protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25
YP_004488329.1	KEGG: dac:Daci_3903 hypothetical protein
YP_004488330.1	KEGG: dac:Daci_3317 hypothetical protein
YP_004488331.1	PFAM: virulence protein, SciE type; KEGG: dac:Daci_3856 virulence protein SciE type
YP_004488332.1	KEGG: dac:Daci_3855 hypothetical protein
YP_004488333.1	KEGG: dac:Daci_3854 putative cytoplasmic protein
YP_004488334.1	KEGG: dac:Daci_3851 EvpB family type VI secretion protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877
YP_004488335.1	KEGG: dac:Daci_3850 type VI secretion protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301
YP_004488336.1	KEGG: dac:Daci_3848 ImpA family type VI secretion-associated protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal
YP_004488337.1	KEGG: dac:Daci_3847 hypothetical protein; TIGRFAM: Type VI secretion system-associated, BMAA0400; PFAM: Type VI secretion system-associated, BMAA0400
YP_004488338.1	KEGG: dac:Daci_3846 type VI secretion protein IcmF; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Protein of unknown function DUF1215
YP_004488339.1	KEGG: dac:Daci_3845 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal
YP_004488340.1	KEGG: dac:Daci_3844 type VI secretion protein; TIGRFAM: Protein of unknown function DUF876, bacterial; PFAM: Protein of unknown function DUF876, bacterial
YP_004488341.1	TIGRFAM: Type VI secretion system, lipoprotein VCA0113; KEGG: dac:Daci_3843 putative lipoprotein
YP_004488342.1	KEGG: dac:Daci_3842 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related
YP_004488343.1	KEGG: dac:Daci_3841 FHA domain-containing protein; TIGRFAM: Type VI secretion system, FHA domain-containing; PFAM: Forkhead-associated
YP_004488344.1	KEGG: dac:Daci_3840 TPR repeat-containing protein
YP_004488345.1	PFAM: PEGA; KEGG: dac:Daci_3839 hypothetical protein
YP_004488346.1	KEGG: dac:Daci_3838 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain
YP_004488347.1	PFAM: Virulence factor, secretion apparatus; KEGG: dac:Daci_3837 hypothetical protein
YP_004488348.1	KEGG: dac:Daci_3836 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004488349.1	PFAM: Flagellar hook-associated 2, C-terminal; KEGG: dac:Daci_3835 hypothetical protein
YP_004488350.1	KEGG: dac:Daci_3834 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004488351.1	KEGG: dac:Daci_3833 hypothetical protein
YP_004488352.1	KEGG: dac:Daci_3832 hypothetical protein
YP_004488353.1	KEGG: dac:Daci_3831 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; CHASE3; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; Signal transduction response regulator, receiver region
YP_004488354.1	KEGG: dac:Daci_3830 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type
YP_004488355.1	KEGG: dac:Daci_3829 CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase
YP_004488356.1	KEGG: dac:Daci_3828 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004488357.1	KEGG: dac:Daci_3827 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004488358.1	PFAM: Metallophosphoesterase; KEGG: dac:Daci_3826 metallophosphoesterase
YP_004488359.1	KEGG: dac:Daci_3825 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region
YP_004488360.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; HAMP linker domain; Cache; Diguanylate cyclase, predicted; KEGG: dac:Daci_3824 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain
YP_004488361.1	PFAM: Protein of unknown function DUF2170; KEGG: dac:Daci_3823 hypothetical protein
YP_004488362.1	PFAM: PspA/IM30; KEGG: dac:Daci_3822 phage shock protein A, PspA
YP_004488363.1	KEGG: dac:Daci_3821 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6
YP_004488364.1	KEGG: dac:Daci_3820 band 7 protein
YP_004488365.1	SMART: ATPase, AAA+ type, core; KEGG: dac:Daci_3819 AAA ATPase
YP_004488366.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: dac:Daci_3818 2Fe-2S iron-sulfur cluster-binding domain-containing protein
YP_004488367.1	KEGG: dac:Daci_3817 molybdopterin dehydrogenase FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding
YP_004488368.1	KEGG: dac:Daci_3816 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004488369.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3815 major facilitator transporter
YP_004488370.1	TIGRFAM: Protocatechuate 4,5-dioxygenase, alpha subunit; KEGG: dac:Daci_3814 protocatechuate 4,5-dioxygenase subunit alpha; PFAM: Extradiol ring-cleavage dioxygenase LigAB, LigA subunit
YP_004488371.1	KEGG: dac:Daci_3813 protocatechuate 4,5-dioxygenase subunit beta; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
YP_004488372.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_3812 alpha/beta hydrolase fold protein
YP_004488373.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3811 LysR family transcriptional regulator
YP_004488374.1	KEGG: dac:Daci_3810 hypothetical protein
YP_004488375.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_3809 porin
YP_004488376.1	PFAM: Anti-sigma K factor RskA; KEGG: dac:Daci_3808 RNA polymerase sigma-70 family protein
YP_004488377.1	KEGG: dac:Daci_3807 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004488378.1	manually curated; KEGG: dac:Daci_3806 hypothetical protein
YP_004488379.1	KEGG: bpy:Bphyt_5715 Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase; PFAM: Dyp-type peroxidase
YP_004488380.1	PFAM: Metallophosphoesterase; KEGG: mms:mma_0799 hypothetical protein
YP_004488381.1	KEGG: aav:Aave_2772 metal dependent phosphohydrolase
YP_004488382.1	KEGG: dac:Daci_3799 hypothetical protein
YP_004488383.1	KEGG: dac:Daci_3798 hypothetical protein
YP_004488384.1	KEGG: dac:Daci_3797 hypothetical protein
YP_004488385.1	KEGG: dac:Daci_3796 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2086
YP_004488386.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dac:Daci_3795 2OG-Fe(II) oxygenase
YP_004488387.1	PFAM: Protein of unknown function DUF2086; KEGG: dac:Daci_3794 hypothetical protein
YP_004488388.1	KEGG: dac:Daci_3793 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004488389.1	PFAM: Periplasmic binding protein; KEGG: dac:Daci_3792 periplasmic-binding protein
YP_004488390.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_3791 transport system permease
YP_004488391.1	PFAM: ABC transporter-like; KEGG: dac:Daci_3790 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488392.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: dac:Daci_3789 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_004488393.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3788 LysR family transcriptional regulator
YP_004488394.1	KEGG: dac:Daci_3787 6-aminohexanoate-dimer hydrolase; PFAM: Beta-lactamase-related
YP_004488395.1	KEGG: dac:Daci_3786 cache sensor-containing methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004488396.1	KEGG: dac:Daci_3785 hypothetical protein
YP_004488397.1	KEGG: dac:Daci_3784 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004488398.1	KEGG: dac:Daci_3783 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004488399.1	KEGG: dac:Daci_3782 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004488400.1	KEGG: dac:Daci_3781 hypothetical protein
YP_004488401.1	PFAM: Integrase, catalytic core, phage; KEGG: dac:Daci_3780 integrase family protein
YP_004488402.1	SMART: Biotin/thiamin synthesis-associated protein; Elongator protein 3/MiaB/NifB; TIGRFAM: Biotin synthase; KEGG: dac:Daci_3779 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM
YP_004488403.1	KEGG: dac:Daci_3778 UvrD/REP helicase
YP_004488404.1	KEGG: dac:Daci_3777 lactoylglutathione lyase
YP_004488405.1	PFAM: Protein of unknown function DUF218; KEGG: dac:Daci_3776 hypothetical protein
YP_004488406.1	KEGG: dac:Daci_3775 ricin B lectin; PFAM: Ricin B lectin; SMART: Ricin B lectin
YP_004488407.1	PFAM: Crotonase, core; KEGG: dac:Daci_3772 enoyl-CoA hydratase/isomerase
YP_004488408.1	KEGG: dac:Daci_3771 formyl-CoA transferase; PFAM: CoA-transferase family III
YP_004488409.1	KEGG: dac:Daci_3770 hypothetical protein
YP_004488410.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3769 LysR family transcriptional regulator
YP_004488411.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: dac:Daci_3768 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004488412.1	KEGG: dac:Daci_3767 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004488413.1	TIGRFAM: KDPG/KHG aldolase; KEGG: dac:Daci_3766 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG/KHG aldolase
YP_004488414.1	TIGRFAM: 6-phosphogluconate dehydratase; KEGG: dac:Daci_3765 phosphogluconate dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004488415.1	KEGG: dac:Daci_3764 TRAP dicarboxylate transporter subunit DctP; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004488416.1	KEGG: dac:Daci_3763 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004488417.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dac:Daci_3762 tripartite ATP-independent periplasmic transporter DctQ
YP_004488418.1	PFAM: Shikimate kinase; manually curated; KEGG: dac:Daci_3761 carbohydrate kinase; TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase
YP_004488419.1	KEGG: dac:Daci_3760 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004488420.1	KEGG: dac:Daci_3759 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region
YP_004488421.1	TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: dac:Daci_3756 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment
YP_004488422.1	KEGG: dac:Daci_3755 carboxyl transferase; PFAM: Carboxyl transferase
YP_004488423.1	KEGG: dac:Daci_3754 arginine/ornithine transport system ATPase; TIGRFAM: ArgK protein; PFAM: ArgK protein
YP_004488424.1	TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: dac:Daci_3753 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding
YP_004488425.1	KEGG: dac:Daci_3752 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004488426.1	KEGG: dac:Daci_3751 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004488427.1	KEGG: dac:Daci_3750 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004488428.1	KEGG: dac:Daci_3749 hypothetical protein
YP_004488429.1	PFAM: Branched-chain amino acid transport; KEGG: dac:Daci_3748 branched-chain amino acid transport
YP_004488430.1	PFAM: AzlC-like; KEGG: dac:Daci_3747 AzlC family protein
YP_004488431.1	KEGG: dac:Daci_3746 hypothetical protein
YP_004488432.1	KEGG: dac:Daci_3745 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004488433.1	KEGG: dac:Daci_3744 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004488434.1	PFAM: Secretion protein HlyD; KEGG: dac:Daci_3743 secretion protein HlyD family protein
YP_004488435.1	KEGG: dac:Daci_3742 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004488436.1	KEGG: dac:Daci_3741 hypothetical protein
YP_004488437.1	KEGG: dac:Daci_3740 hypothetical protein
YP_004488438.1	PFAM: Amino acid permease-associated region; KEGG: dac:Daci_3739 D-alanine/D-serine/glycine permease
YP_004488439.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_3738 TonB-dependent receptor
YP_004488440.1	PFAM: Helix-turn-helix, HxlR type; KEGG: dac:Daci_3736 HxlR family transcriptional regulator
YP_004488441.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3735 major facilitator transporter
YP_004488442.1	KEGG: dac:Daci_3734 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004488443.1	PFAM: Protein of unknown function DUF81; KEGG: dac:Daci_3733 hypothetical protein
YP_004488444.1	KEGG: pop:POPTR_946046 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004488445.1	KEGG: dac:Daci_3731 hypothetical protein
YP_004488446.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_3730 TonB-dependent receptor
YP_004488447.1	PFAM: Periplasmic binding protein; KEGG: dac:Daci_3729 periplasmic-binding protein
YP_004488448.1	PFAM: Uncharacterised protein family UPF0145; KEGG: dac:Daci_3728 hypothetical protein
YP_004488449.1	KEGG: pna:Pnap_4036 hypothetical protein
YP_004488450.1	KEGG: ctt:CtCNB1_3810 hypothetical protein
YP_004488451.1	KEGG: dac:Daci_3717 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004488452.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dac:Daci_3716 antibiotic biosynthesis monooxygenase
YP_004488453.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: dac:Daci_3715 glutamine amidotransferase
YP_004488454.1	PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; KEGG: dac:Daci_3714 ferredoxin
YP_004488455.1	KEGG: dac:Daci_3713 hypothetical protein
YP_004488456.1	KEGG: dac:Daci_3712 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004488457.1	KEGG: dac:Daci_3711 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004488458.1	KEGG: dac:Daci_3710 benzoate transporter; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein
YP_004488459.1	KEGG: dac:Daci_3709 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal
YP_004488460.1	PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: dac:Daci_3708 acetylornithine and succinylornithine aminotransferase
YP_004488461.1	KEGG: dac:Daci_3707 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004488462.1	KEGG: tmz:Tmz1t_0354 hypothetical protein
YP_004488463.1	KEGG: tmz:Tmz1t_0355 hypothetical protein
YP_004488464.1	PFAM: Patatin; KEGG: dac:Daci_3706 patatin
YP_004488465.1	SMART: Helix-turn-helix type 3; manually curated; KEGG: gca:Galf_1454 plasmid maintenance system antidote protein, XRE family; TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3
YP_004488466.1	PFAM: Plasmid maintenance system killer; KEGG: gca:Galf_1455 plasmid maintenance system killer
YP_004488467.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3705 LysR family transcriptional regulator
YP_004488468.1	KEGG: dac:Daci_3704 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004488469.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_3703 salicylate hydroxylase
YP_004488470.1	PFAM: Transposase, mutator type; KEGG: rme:Rmet_2268 transposase, mutator type
YP_004488471.1	PFAM: Transposase, IS4-like; KEGG: dac:Daci_4477 transposase, IS4 family protein
YP_004488472.1	manually curated; KEGG: dac:Daci_4071 histone family protein nucleoid-structuring protein H-NS
YP_004488473.1	KEGG: bbe:BBR47_11000 signaling protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_004488474.1	KEGG: fps:FP1171 hypothetical protein
YP_004488475.1	manually curated; KEGG: dac:Daci_1464 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004488476.1	KEGG: mpt:Mpe_A0311 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_004488477.1	TIGRFAM: Penicillin-binding protein 1A; KEGG: rme:Rmet_2152 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004488478.1	KEGG: dac:Daci_3679 PAS/PAC sensor hybrid histidine kinase
YP_004488479.1	KEGG: dac:Daci_3681 hypothetical protein
YP_004488480.1	KEGG: dac:Daci_3680 porin
YP_004488481.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; KEGG: dac:Daci_3679 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Signal transduction response regulator, receiver region
YP_004488482.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3676 LysR family transcriptional regulator
YP_004488483.1	KEGG: dac:Daci_3675 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004488484.1	PFAM: Cupin 2, conserved barrel; KEGG: dac:Daci_3674 cupin 2 domain-containing protein
YP_004488485.1	KEGG: dac:Daci_3673 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004488486.1	KEGG: dac:Daci_3672 hypothetical protein
YP_004488487.1	PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: dac:Daci_3671 activator of HSP90 ATPase 1 family protein
YP_004488488.1	PFAM: Cupin 2, conserved barrel; KEGG: dac:Daci_3670 cupin 2 domain-containing protein
YP_004488489.1	KEGG: bav:BAV0636 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004488490.1	PFAM: FecR protein; KEGG: neu:NE1078 putative transmembrane sensor
YP_004488491.1	KEGG: mms:mma_2352 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488492.1	KEGG: dac:Daci_3669 putative lipoprotein
YP_004488493.1	KEGG: dac:Daci_3668 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004488494.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_3667 lysine exporter protein LysE/YggA
YP_004488495.1	KEGG: dac:Daci_3666 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese-like
YP_004488496.1	PFAM: Beta-lactamase-related; KEGG: dac:Daci_3665 beta-lactamase
YP_004488497.1	manually curated; KEGG: dac:Daci_3664 aspartyl protease-like protein
YP_004488498.1	KEGG: dac:Daci_3663 hypothetical protein
YP_004488499.1	TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: dac:Daci_3661 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004488500.1	KEGG: dac:Daci_3660 hypothetical protein
YP_004488501.1	KEGG: dac:Daci_3659 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF192
YP_004488502.1	KEGG: dac:Daci_3658 hypothetical protein
YP_004488503.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_3657 TonB-dependent receptor
YP_004488504.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_3656 hypothetical protein
YP_004488505.1	KEGG: dac:Daci_3655 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004488506.1	KEGG: dac:Daci_3654 hypothetical protein
YP_004488507.1	PFAM: Ferric-uptake regulator; KEGG: dac:Daci_3653 ferric uptake regulator family protein
YP_004488508.1	KEGG: dac:Daci_3652 carbonic anhydrase
YP_004488509.1	TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: dac:Daci_3651 50S ribosomal protein L36; PFAM: Ribosomal protein L36
YP_004488510.1	KEGG: dac:Daci_3650 putative GTP cyclohydrolase; PFAM: Protein of unknown function DUF198
YP_004488511.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: dac:Daci_3649 cobalamin synthesis protein P47K
YP_004488512.1	KEGG: dac:Daci_3648 ferric uptake regulator family protein
YP_004488513.1	manually curated; KEGG: dac:Daci_3647 hypothetical protein
YP_004488514.1	KEGG: dac:Daci_3646 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1
YP_004488515.1	TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; KEGG: dac:Daci_3645 NADP-dependent isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type
YP_004488516.1	KEGG: dac:Daci_3644 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004488517.1	KEGG: dac:Daci_3643 cytochrome P450; PFAM: Cytochrome P450
YP_004488518.1	PFAM: Divalent ion symporter; KEGG: dac:Daci_3642 citrate transporter
YP_004488519.1	HAMAP: Aliphatic amidase; KEGG: dac:Daci_3641 acylamide amidohydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004488520.1	PFAM: ATPase associated with various cellular activities, AAA-5; CbbQ/NirQ/NorQ C-terminal; KEGG: dac:Daci_3640 ATPase
YP_004488521.1	KEGG: dac:Daci_3639 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A
YP_004488522.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_3638 branched chain amino acid ABC transporter periplasmic ligand-binding protein
YP_004488523.1	PFAM: ANTAR; KEGG: dac:Daci_3637 response regulator receiver/ANTAR domain-containing protein
YP_004488524.1	KEGG: dac:Daci_3636 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; SMART: Metal-dependent phosphohydrolase, HD region; Signal transduction response regulator, receiver region
YP_004488525.1	KEGG: hypothetical protein
YP_004488526.1	KEGG: aav:Aave_2365 hypothetical protein
YP_004488527.1	KEGG: aav:Aave_2364 hypothetical protein
YP_004488528.1	KEGG: aav:Aave_2363 hypothetical protein
YP_004488529.1	KEGG: aav:Aave_2363 hypothetical protein
YP_004488530.1	PFAM: Cell surface receptor IPT/TIG; Putative Ig; KEGG: pfl:PFL_3520 outer membrane autotransporter
YP_004488532.1	PFAM: Integrase, catalytic core, phage; KEGG: cps:CPS_0354 phage integrase family site specific recombinase
YP_004488533.1	KEGG: dac:Daci_3621 tRNA-dihydrouridine synthase A; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN; PFAM: tRNA-dihydrouridine synthase
YP_004488534.1	KEGG: dac:Daci_3620 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: Polyhydroxyalkanoate depolymerase; PFAM: PHB de-polymerase, C-terminal
YP_004488535.1	KEGG: dac:Daci_3619 electron transport complex, RnfABCDGE type subunit B; TIGRFAM: Electron transport complex, RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004488536.1	KEGG: dac:Daci_3618 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004488537.1	TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; KEGG: dac:Daci_3617 succinyldiaminopimelate transaminase; PFAM: Aminotransferase, class I/II
YP_004488538.1	KEGG: dac:Daci_3616 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
YP_004488539.1	KEGG: dac:Daci_3615 twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E
YP_004488540.1	TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: dac:Daci_3614 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004488541.1	TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: dac:Daci_3613 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small
YP_004488542.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_3612 LysR family transcriptional regulator
YP_004488543.1	KEGG: dac:Daci_3611 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004488544.1	KEGG: dac:Daci_3610 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004488545.1	KEGG: dac:Daci_3609 hypothetical protein
YP_004488546.1	KEGG: dac:Daci_3608 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004488547.1	PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: dac:Daci_3607 RpiR family transcriptional regulator
YP_004488548.1	KEGG: dac:Daci_3606 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004488549.1	KEGG: dac:Daci_3605 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004488550.1	KEGG: dac:Daci_3604 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004488551.1	KEGG: dac:Daci_3603 peptidase T2 asparaginase 2; PFAM: Peptidase T2, asparaginase 2
YP_004488553.1	TIGRFAM: Acetoacetyl-CoA reductase; KEGG: dac:Daci_3602 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004488554.1	KEGG: dac:Daci_3601 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004488555.1	KEGG: dac:Daci_3600 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: Poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; Alpha/beta hydrolase fold-1
YP_004488556.1	KEGG: dac:Daci_3599 hypothetical protein
YP_004488557.1	KEGG: dac:Daci_3598 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase
YP_004488558.1	TIGRFAM: Maleylacetoacetate isomerase; KEGG: dac:Daci_3597 maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal
YP_004488559.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: dac:Daci_3596 fumarylacetoacetate (FAA) hydrolase
YP_004488560.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_3595 NUDIX hydrolase
YP_004488561.1	KEGG: dac:Daci_3594 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004488562.1	PFAM: Patatin; KEGG: dac:Daci_3593 patatin
YP_004488563.1	SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: dac:Daci_3592 DNA ligase, NAD-dependent; HAMAP: DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT
YP_004488564.1	SMART: ZipA, C-terminal FtsZ-binding region; KEGG: dac:Daci_3591 ZipA
YP_004488565.1	KEGG: dac:Daci_3590 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; SMCs flexible hinge
YP_004488566.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dac:Daci_3589 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004488567.1	KEGG: dac:Daci_3588 hypothetical protein
YP_004488568.1	TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent; KEGG: dac:Daci_3587 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004488569.1	KEGG: dac:Daci_3586 AcnD-accessory protein PrpF; TIGRFAM: PrpF, AcnD-accessory; PFAM: PrpF protein
YP_004488570.1	KEGG: dac:Daci_3585 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004488571.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3584 LysR family transcriptional regulator
YP_004488572.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV_1896 acetyltransferase
YP_004488574.1	KEGG: dac:Daci_3583 hypothetical protein
YP_004488575.1	TIGRFAM: Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR; PAS; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, propionate catabolism activator, N-terminal; PAS fold; Helix-turn-helix, Fis-type; KEGG: dac:Daci_3582 fis family proprionate catabolism activator; SMART: ATPase, AAA+ type, core; PAS
YP_004488576.1	KEGG: dac:Daci_3581 hypothetical protein
YP_004488577.1	KEGG: dac:Daci_3580 hypothetical protein
YP_004488578.1	KEGG: dac:Daci_3579 PEP phosphonomutase; PFAM: Isocitrate lyase/phosphorylmutase
YP_004488579.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_3578 TetR family transcriptional regulator
YP_004488580.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3577 major facilitator transporter
YP_004488581.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_3576 LysR family transcriptional regulator
YP_004488582.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3575 major facilitator transporter
YP_004488583.1	KEGG: dac:Daci_3574 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal
YP_004488584.1	PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: dac:Daci_3573 exodeoxyribonuclease VII large subunit
YP_004488585.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dac:Daci_3572 MotA/TolQ/ExbB proton channel
YP_004488586.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dac:Daci_3571 biopolymer transport protein ExbD/TolR
YP_004488587.1	PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: dac:Daci_3570 tetraacyldisaccharide 4'-kinase
YP_004488588.1	PFAM: Protein of unknown function DUF343; KEGG: dac:Daci_3569 hypothetical protein
YP_004488589.1	PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: dac:Daci_3568 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_004488590.1	KEGG: dac:Daci_3567 adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region
YP_004488591.1	KEGG: dac:Daci_3566 asparaginase; PFAM: Asparaginase/glutaminase
YP_004488592.1	KEGG: dac:Daci_3565 LexA repressor; TIGRFAM: Peptidase S24, LexA repressor; PFAM: LexA DNA-binding region; Peptidase S24/S26A/S26B, conserved region
YP_004488593.1	KEGG: dac:Daci_3564 hypothetical protein
YP_004488594.1	manually curated; TIGRFAM: RNA polymerase sigma-70; KEGG: dac:Daci_3563 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488595.1	PFAM: FecR protein; KEGG: dac:Daci_3562 anti-FecI sigma factor FecR
YP_004488596.1	KEGG: dac:Daci_3561 hypothetical protein
YP_004488597.1	TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: dac:Daci_3560 CrcB protein; PFAM: Camphor resistance CrcB protein
YP_004488598.1	KEGG: dac:Daci_3559 hypothetical protein
YP_004488599.1	KEGG: dps:DP0735 hypothetical protein
YP_004488600.1	KEGG: aav:Aave_2360 hypothetical protein
YP_004488601.1	KEGG: dac:Daci_2640 prophage LambdaSo, lysozyme
YP_004488603.1	KEGG: dac:Daci_3435 hypothetical protein
YP_004488604.1	KEGG: dac:Daci_3434 hypothetical protein
YP_004488605.1	KEGG: hypothetical protein
YP_004488606.1	KEGG: dma:DMR_25000 hypothetical protein
YP_004488607.1	KEGG: hypothetical protein
YP_004488609.1	KEGG: aav:Aave_1721 hypothetical protein
YP_004488611.1	KEGG: ctt:CtCNB1_1447 hypothetical protein
YP_004488612.1	PFAM: Excalibur calcium-binding domain; KEGG: app:CAP2UW1_3523 cold-shock DNA-binding protein family
YP_004488614.1	KEGG: dac:Daci_4122 hypothetical protein
YP_004488616.1	KEGG: bcj:BCAM1040 hypothetical protein
YP_004488617.1	KEGG: ppg:PputGB1_1721 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease
YP_004488618.1	KEGG: bgl:bglu_1g20710 hypothetical protein
YP_004488619.1	PFAM: Histone-like nucleoid-structuring protein H-NS; KEGG: dac:Daci_4128 histone family protein nucleoid-structuring protein H-NS
YP_004488620.1	KEGG: hypothetical protein
YP_004488622.1	PFAM: Prophage CP4-57 regulatory; KEGG: dac:Daci_3544 phage transcriptional regulator AlpA
YP_004488623.1	KEGG: bpr:GBP346_A2736 integrase family protein; manually curated; PFAM: Integrase, catalytic core, phage
YP_004488624.1	KEGG: dac:Daci_3541 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004488625.1	KEGG: aav:Aave_3160 hypothetical protein
YP_004488626.1	PFAM: DNA polymerase III chi subunit, HolC; KEGG: dac:Daci_3540 DNA polymerase III chi subunit HolC
YP_004488627.1	KEGG: dac:Daci_3539 leucyl aminopeptidase; HAMAP: cytosol aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal
YP_004488628.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: dac:Daci_3538 permease YjgP/YjgQ family protein
YP_004488629.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: dac:Daci_3537 permease YjgP/YjgQ family protein
YP_004488630.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: dac:Daci_3536 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_004488631.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3535 transcriptional regulator CysB-like protein
YP_004488632.1	KEGG: dac:Daci_3534 putative aminotransferase; PFAM: Aminotransferase, class I/II
YP_004488633.1	KEGG: dac:Daci_3533 feruloyl esterase; PFAM: Tannase/feruloyl esterase
YP_004488634.1	KEGG: dac:Daci_3532 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004488635.1	KEGG: dac:Daci_3531 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004488636.1	KEGG: axy:AXYL_04231 siderophore transporter, RhtX/FptX family protein; TIGRFAM: Siderophore transporter, RhtX/FptX family; PFAM: Major facilitator superfamily MFS-1
YP_004488637.1	PFAM: Cupin 2, conserved barrel; KEGG: axy:AXYL_04232 cupin domain-containing protein 5
YP_004488638.1	KEGG: axy:AXYL_04233 Fe(3+)-pyochelin receptor 2; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004488639.1	KEGG: axy:AXYL_04234 AraC family regulatory helix-turn-helix protein 24; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004488640.1	KEGG: dac:Daci_3530 hypothetical protein
YP_004488641.1	KEGG: dac:Daci_3529 monooxygenase FAD-binding
YP_004488642.1	KEGG: dac:Daci_3528 hypothetical protein
YP_004488643.1	KEGG: dac:Daci_3527 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain
YP_004488644.1	TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: dac:Daci_3526 maf protein; PFAM: Maf-like protein
YP_004488645.1	KEGG: dac:Daci_3525 rRNA large subunit methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00246; PFAM: SPOUT methyltransferase, predicted
YP_004488646.1	KEGG: dac:Daci_3524 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein
YP_004488647.1	HAMAP: Coproporphyrinogen-III oxidase, aerobic; KEGG: dac:Daci_3523 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase
YP_004488648.1	TIGRFAM: Phosphoribosylglycinamide synthetase; KEGG: dac:Daci_3522 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain
YP_004488649.1	TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: dac:Daci_3521 hypothetical protein; PFAM: Protein of unknown function DUF28
YP_004488650.1	PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; KEGG: dac:Daci_3520 hypothetical protein
YP_004488651.1	KEGG: dac:Daci_3519 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004488652.1	KEGG: dac:Daci_3518 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: Phosphoribosyltransferase
YP_004488653.1	PFAM: Protein of unknown function DUF28; KEGG: dac:Daci_3517 hypothetical protein
YP_004488654.1	KEGG: dac:Daci_3515 hypothetical protein
YP_004488655.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_3514 amidohydrolase 2
YP_004488656.1	KEGG: dac:Daci_3513 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004488657.1	KEGG: dac:Daci_3512 hypothetical protein
YP_004488658.1	KEGG: dac:Daci_3511 citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase
YP_004488659.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3510 LysR family transcriptional regulator
YP_004488660.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3509 LysR family transcriptional regulator
YP_004488661.1	manually curated; KEGG: dac:Daci_3508 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 12
YP_004488662.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_3507 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004488663.1	PFAM: Nucleoside recognition; KEGG: dac:Daci_3506 nucleoside recognition domain-containing protein
YP_004488664.1	PFAM: Nucleotidyltransferase; KEGG: vei:Veis_1408 DNA polymerase beta subunit
YP_004488665.1	PFAM: Protein of unknown function DUF86; KEGG: tmz:Tmz1t_2149 protein of unknown function DUF86
YP_004488666.1	KEGG: dac:Daci_3505 exonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III
YP_004488667.1	PFAM: Phospholipase D/Transphosphatidylase; KEGG: dac:Daci_3504 phospholipase D/transphosphatidylase
YP_004488668.1	TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: dac:Daci_3503 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase, AAA+ type, core
YP_004488669.1	PFAM: Adaptor protein ClpS, core; KEGG: dac:Daci_3502 ATP-dependent Clp protease adaptor protein ClpS
YP_004488670.1	SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dac:Daci_3501 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004488671.1	TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: dac:Daci_3500 putative transmembrane protein
YP_004488672.1	SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: dac:Daci_3499 helicase C2
YP_004488673.1	KEGG: dac:Daci_3498 protein serine/threonine phosphatase; manually curated; SMART: Protein phosphatase 2C-related
YP_004488674.1	KEGG: dac:Daci_3497 hypothetical protein
YP_004488675.1	PFAM: ATPase, AFG1-like; KEGG: dac:Daci_3496 AFG1 family ATPase
YP_004488676.1	TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: dac:Daci_3495 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004488677.1	TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: dac:Daci_3494 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004488678.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: dac:Daci_3493 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component
YP_004488679.1	PFAM: Uncharacterised protein family UPF0118; KEGG: dac:Daci_3492 hypothetical protein
YP_004488680.1	PFAM: Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; KEGG: dac:Daci_3491 molybdopterin oxidoreductase Fe4s4 region
YP_004488681.1	TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; KEGG: dac:Daci_3490 formate dehydrogenase subunit alpha; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_004488682.1	KEGG: dac:Daci_3489 formate dehydrogenase subunit beta; TIGRFAM: Formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase, transmembrane; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004488683.1	TIGRFAM: Formate dehydrogenase, gamma subunit; KEGG: dac:Daci_3488 formate dehydrogenase subunit gamma
YP_004488684.1	TIGRFAM: Formate dehydrogenase accessory protein; HAMAP: Formate dehydrogenase accessory protein; KEGG: dac:Daci_3487 formate dehydrogenase accessory protein FdhE; PFAM: Formate dehydrogenase accessory protein
YP_004488685.1	PFAM: Pyridoxal phosphate-dependent transferase; TIGRFAM: L-seryl-tRNA selenium transferase; HAMAP: L-seryl-tRNA(Sec) selenium transferase; KEGG: dac:Daci_3486 selenocysteine synthase
YP_004488686.1	KEGG: dac:Daci_3485 selenocysteine-specific translation elongation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 2; Translation elongation factor SelB, winged helix, type 3
YP_004488687.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dac:Daci_3484 OmpA/MotB domain-containing protein
YP_004488688.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: dac:Daci_3483 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; HAMP linker domain
YP_004488689.1	KEGG: dac:Daci_3482 hypothetical protein
YP_004488690.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_2169 GCN5-related N-acetyltransferase
YP_004488691.1	TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase; KEGG: dac:Daci_3481 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_004488692.1	PFAM: Peptidase S45, penicillin amidase; KEGG: dac:Daci_3480 peptidase S45 penicillin amidase
YP_004488693.1	KEGG: dac:Daci_3479 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004488694.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_3478 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004488695.1	KEGG: dac:Daci_3477 cache sensor-containing methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004488696.1	PFAM: Histone-like nucleoid-structuring protein H-NS; KEGG: dac:Daci_3476 histone family protein nucleoid-structuring protein H-NS
YP_004488697.1	KEGG: dac:Daci_3475 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004488698.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_3474 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004488699.1	PFAM: CsbD-like; KEGG: dac:Daci_3473 CsbD family protein
YP_004488700.1	KEGG: dac:Daci_3472 Arc domain-containing protein
YP_004488701.1	KEGG: dac:Daci_3471 hypothetical protein
YP_004488702.1	KEGG: dac:Daci_3470 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core
YP_004488703.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_3469 GCN5-related N-acetyltransferase
YP_004488704.1	KEGG: dac:Daci_3468 hypothetical protein
YP_004488706.1	PFAM: Choloylglycine hydrolase; KEGG: dac:Daci_3467 choloylglycine hydrolase
YP_004488707.1	KEGG: dac:Daci_3466 hypothetical protein
YP_004488708.1	KEGG: dac:Daci_3583 hypothetical protein
YP_004488709.1	PFAM: Fibronectin, type III; KEGG: gsu:GSU0754 fibronectin type III domain-containing protein
YP_004488710.1	KEGG: hypothetical protein
YP_004488711.1	KEGG: app:CAP2UW1_2189 hypothetical protein
YP_004488714.1	PFAM: Transport-associated; KEGG: son:SO_0204 hypothetical protein
YP_004488715.1	PFAM: PRC-barrel; KEGG: dac:Daci_4398 PRC-barrel domain-containing protein
YP_004488718.1	KEGG: rcu:RCOM_2155620 hypothetical protein
YP_004488719.1	PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: dac:Daci_3397 UBA/ThiF-type NAD/FAD-binding protein
YP_004488720.1	KEGG: dac:Daci_3396 tol-pal system protein YbgF; TIGRFAM: Tol-Pal system, YbgF; PFAM: Tetratricopeptide TPR2
YP_004488721.1	KEGG: dac:Daci_3395 peptidoglycan-associated lipoprotein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal
YP_004488722.1	TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: dac:Daci_3394 translocation protein TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller
YP_004488723.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, lipid A export, MsbA; KEGG: dac:Daci_3393 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_004488724.1	PFAM: Ankyrin repeat; KEGG: dac:Daci_3392 ankyrin
YP_004488725.1	KEGG: dac:Daci_3391 TatD family hydrolase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related
YP_004488726.1	PFAM: Type IV pilus assembly PilZ; KEGG: dac:Daci_3390 type IV pilus assembly PilZ
YP_004488727.1	KEGG: dac:Daci_3389 DNA-directed DNA polymerase
YP_004488728.1	TIGRFAM: Thymidylate kinase; KEGG: dac:Daci_3388 thymidylate kinase; PFAM: Thymidylate kinase-like
YP_004488729.1	KEGG: dac:Daci_3387 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like
YP_004488730.1	KEGG: dac:Daci_3386 folate-binding protein YgfZ; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal
YP_004488731.1	KEGG: dac:Daci_3385 GCN5-related N-acetyltransferase; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: GCN5-related N-acetyltransferase; Thioesterase superfamily
YP_004488732.1	KEGG: dac:Daci_3384 alpha/beta hydrolase domain-containing protein
YP_004488733.1	KEGG: dac:Daci_3383 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004488734.1	KEGG: dac:Daci_3382 putative phytochrome sensor protein; PFAM: Uncharacterised protein family UPF0118; GAF; SMART: GAF
YP_004488735.1	PFAM: ATP-binding region, ATPase-like; KEGG: dac:Daci_3381 putative signal transduction histidine kinase
YP_004488736.1	KEGG: dac:Daci_3380 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004488737.1	KEGG: dac:Daci_3379 hypothetical protein
YP_004488738.1	KEGG: dac:Daci_3378 hypothetical protein
YP_004488739.1	PFAM: Peptidoglycan binding-like; KEGG: dac:Daci_3377 peptidoglycan-binding domain-containing protein
YP_004488740.1	KEGG: dac:Daci_3376 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_004488741.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: dac:Daci_3375 putative signal transduction protein
YP_004488742.1	KEGG: dac:Daci_3374 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold
YP_004488743.1	PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: dac:Daci_3373 multicopper oxidase type 2
YP_004488744.1	PFAM: Regulator of chromosome condensation, RCC1; KEGG: dac:Daci_3372 regulator of chromosome condensation RCC1
YP_004488745.1	PFAM: Protein of unknown function DUF72; KEGG: dac:Daci_3371 hypothetical protein
YP_004488746.1	KEGG: dac:Daci_3370 hypothetical protein
YP_004488747.1	KEGG: dac:Daci_3369 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004488748.1	KEGG: dac:Daci_3368 hydrophobe/amphiphile efflux-1 family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004488749.1	KEGG: dac:Daci_3367 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004488750.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3366 major facilitator transporter
YP_004488751.1	KEGG: dac:Daci_3365 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004488752.1	PFAM: Protein of unknown function DUF1566; KEGG: dac:Daci_3364 hypothetical protein
YP_004488753.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_3363 hypothetical protein
YP_004488754.1	KEGG: dac:Daci_3362 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding
YP_004488755.1	KEGG: dac:Daci_3361 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004488756.1	KEGG: dac:Daci_3360 gluconate 5-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004488757.1	KEGG: dac:Daci_3359 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004488758.1	KEGG: dac:Daci_3358 hypothetical protein
YP_004488759.1	PFAM: S-adenosylmethionine-dependent methyltransferase; KEGG: dac:Daci_3357 hypothetical protein
YP_004488760.1	PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: dac:Daci_3356 phosphopyruvate hydratase
YP_004488761.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3355 LysR family transcriptional regulator
YP_004488762.1	PFAM: Helix-turn-helix, Fis-type; KEGG: dac:Daci_3354 fis family transcriptional regulator
YP_004488763.1	PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: dac:Daci_3353 TonB-dependent receptor plug
YP_004488764.1	SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG: dac:Daci_3352 methanol/ethanol family PQQ-dependent dehydrogenase; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal
YP_004488765.1	KEGG: dac:Daci_3351 hypothetical protein
YP_004488766.1	PFAM: Aldehyde dehydrogenase; KEGG: dac:Daci_3350 aldehyde dehydrogenase
YP_004488767.1	PFAM: Peptidase S41; KEGG: dac:Daci_3349 peptidase S41
YP_004488768.1	KEGG: dac:Daci_3348 putative transcriptional regulator
YP_004488769.1	KEGG: dac:Daci_3347 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase, membrane binding, C-terminal; FAD linked oxidase, N-terminal
YP_004488770.1	KEGG: dac:Daci_3346 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004488771.1	KEGG: dac:Daci_3345 DNA-binding transcriptional repressor LldR; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004488772.1	KEGG: dac:Daci_3344 L-lactate permease; TIGRFAM: L-lactate permease; PFAM: L-lactate permease
YP_004488773.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_3343 LysR family transcriptional regulator
YP_004488774.1	KEGG: dac:Daci_3342 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase
YP_004488775.1	KEGG: dac:Daci_3341 hypothetical protein
YP_004488776.1	KEGG: dac:Daci_3340 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004488777.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: dac:Daci_3339 mandelate racemase/muconate lactonizing protein
YP_004488778.1	KEGG: tjr:TherJR_0820 hypothetical protein
YP_004488779.1	TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: dac:Daci_3338 phosphonate ABC transporter periplasmic phosphonate-binding protein
YP_004488780.1	PFAM: ABC transporter-like; KEGG: dac:Daci_3337 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488781.1	KEGG: dac:Daci_3336 phosphonate ABC transporter inner membrane subunit; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004488782.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3335 LysR family transcriptional regulator
YP_004488783.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_3334 hypothetical protein
YP_004488784.1	KEGG: dac:Daci_3333 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004488785.1	KEGG: dac:Daci_3332 hypothetical protein
YP_004488786.1	SMART: Tetratricopeptide repeat; KEGG: dac:Daci_3331 TPR repeat-containing protein
YP_004488787.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: dac:Daci_3330 flavodoxin/nitric oxide synthase
YP_004488788.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3329 LysR family transcriptional regulator
YP_004488789.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3328 major facilitator transporter
YP_004488790.1	KEGG: dac:Daci_3327 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488791.1	KEGG: dac:Daci_3326 anti-FecI sigma factor FecR; TIGRFAM: RNA polymerase sigma-70; PFAM: FecR protein; RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488792.1	KEGG: dac:Daci_3325 hypothetical protein
YP_004488793.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3324 LysR family transcriptional regulator
YP_004488794.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_3323 glutathione S-transferase domain-containing protein
YP_004488795.1	KEGG: dac:Daci_3322 oxidoreductase FAD/NAD(P)-binding subunit; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Ferredoxin
YP_004488796.1	KEGG: dac:Daci_3320 hypothetical protein
YP_004488797.1	KEGG: dac:Daci_3319 hypothetical protein
YP_004488798.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_3318 GCN5-related N-acetyltransferase
YP_004488799.1	KEGG: dac:Daci_3317 hypothetical protein
YP_004488800.1	manually curated; KEGG: dac:Daci_3316 hypothetical protein
YP_004488801.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; KEGG: dac:Daci_3315 acyl-CoA dehydrogenase domain-containing protein
YP_004488802.1	KEGG: dac:Daci_3314 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004488803.1	KEGG: dac:Daci_3313 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004488804.1	KEGG: dac:Daci_3312 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004488805.1	PFAM: ABC transporter-like; KEGG: dac:Daci_3311 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488806.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_3310 inner-membrane translocator
YP_004488807.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_3309 inner-membrane translocator
YP_004488808.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_3308 extracellular ligand-binding receptor
YP_004488809.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_3307 extracellular ligand-binding receptor
YP_004488810.1	KEGG: dac:Daci_3306 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004488811.1	KEGG: dac:Daci_3305 X-Pro dipeptidyl-peptidase domain-containing protein; TIGRFAM: CocE/NonD hydrolase; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S15
YP_004488812.1	PFAM: Carboxylesterase, type B; KEGG: dac:Daci_3304 carboxylesterase type B
YP_004488813.1	KEGG: dac:Daci_3303 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004488814.1	KEGG: dac:Daci_3302 hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061
YP_004488815.1	TIGRFAM: Methionine sulphoxide reductase B; KEGG: dac:Daci_3301 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B
YP_004488816.1	TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: dac:Daci_3300 intracellular septation protein A; PFAM: Intracellular septation protein A
YP_004488817.1	PFAM: BolA-like protein; KEGG: dac:Daci_3299 BolA family protein
YP_004488818.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dac:Daci_3298 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004488819.1	KEGG: dac:Daci_3297 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004488820.1	KEGG: dac:Daci_3296 ankyrin
YP_004488821.1	KEGG: dac:Daci_3295 hypothetical protein; PFAM: Protein of unknown function DUF1058; SMART: Bacterial SH3-like region
YP_004488822.1	TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: dac:Daci_3294 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004488823.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_3293 FAD dependent oxidoreductase
YP_004488824.1	KEGG: dac:Daci_3292 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS
YP_004488825.1	KEGG: dac:Daci_3291 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis
YP_004488826.1	TIGRFAM: Thiamine monophosphate synthase; KEGG: dac:Daci_3290 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase
YP_004488827.1	KEGG: dac:Daci_3289 hypothetical protein
YP_004488828.1	KEGG: dac:Daci_3288 3-hydroxy-acyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004488829.1	KEGG: dac:Daci_3287 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004488830.1	PFAM: Aminoglycoside phosphotransferase; KEGG: dac:Daci_3286 aminoglycoside phosphotransferase
YP_004488831.1	KEGG: dac:Daci_3285 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004488832.1	KEGG: dac:Daci_3284 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004488833.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: dac:Daci_3283 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488834.1	KEGG: dac:Daci_3282 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004488835.1	KEGG: dac:Daci_3281 hypothetical protein
YP_004488836.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_3280 PepSY-associated TM helix domain-containing protein
YP_004488837.1	KEGG: dac:Daci_3279 hypothetical protein
YP_004488838.1	KEGG: ppw:PputW619_3544 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488839.1	KEGG: ctt:CtCNB1_1958 putative FecR; TIGRFAM: RNA polymerase sigma-70; PFAM: FecR protein; RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488840.1	KEGG: dac:Daci_3278 hypothetical protein
YP_004488841.1	KEGG: dac:Daci_3277 hypothetical protein
YP_004488842.1	KEGG: ppg:PputGB1_0860 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488843.1	PFAM: FecR protein; KEGG: hse:Hsero_0034 Fe2+-dicitrate sensor membrane protein
YP_004488844.1	KEGG: mms:mma_3493 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488845.1	KEGG: dac:Daci_3276 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488846.1	PFAM: FecR protein; KEGG: dac:Daci_3275 anti-FecI sigma factor FecR
YP_004488847.1	KEGG: dac:Daci_3274 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488848.1	KEGG: dac:Daci_3273 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488849.1	PFAM: FecR protein; KEGG: dac:Daci_3272 anti-FecI sigma factor FecR
YP_004488850.1	KEGG: dac:Daci_3271 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488851.1	KEGG: dac:Daci_3270 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488852.1	PFAM: FecR protein; KEGG: dac:Daci_3269 anti-FecI sigma factor FecR
YP_004488853.1	KEGG: dac:Daci_3268 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488854.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; PAS fold-4; GAF; KEGG: dac:Daci_3267 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; GAF
YP_004488855.1	KEGG: dac:Daci_3266 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004488856.1	KEGG: bpm:BURPS1710b_3602 hypothetical protein
YP_004488857.1	KEGG: dac:Daci_3264 aminopeptidase N; TIGRFAM: Peptidase M1, alanyl aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal
YP_004488858.1	HAMAP: Fructose-1,6-bisphosphatase; KEGG: dac:Daci_3263 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase
YP_004488859.1	KEGG: dac:Daci_1656 hypothetical protein
YP_004488860.1	PFAM: Transposase, mutator type; KEGG: rme:Rmet_2268 transposase, mutator type
YP_004488861.1	PFAM: Protein of unknown function DUF159; KEGG: dac:Daci_4665 hypothetical protein
YP_004488862.1	KEGG: fjo:Fjoh_3952 hypothetical protein
YP_004488864.1	PFAM: Integrase, catalytic core; HTH transcriptional regulator, LacI; KEGG: bcm:Bcenmc03_5566 integrase catalytic region
YP_004488865.1	KEGG: pop:POPTR_595153 hypothetical protein
YP_004488867.1	KEGG: dac:Daci_1625 hypothetical protein
YP_004488868.1	KEGG: dac:Daci_1625 hypothetical protein
YP_004488869.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3192 major facilitator transporter
YP_004488870.1	PFAM: Adenylylsulphate kinase, C-terminal; TIGRFAM: Adenylylsulphate kinase, C-terminal; HAMAP: Adenylyl-sulfate kinase; KEGG: dac:Daci_3191 adenylyl-sulfate kinase
YP_004488871.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: dac:Daci_3190 aspartyl/asparaginyl beta-hydroxylase
YP_004488872.1	KEGG: dac:Daci_3189 hypothetical protein
YP_004488873.1	KEGG: dac:Daci_3188 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004488874.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_3187 hypothetical protein
YP_004488875.1	KEGG: dac:Daci_3186 hypothetical protein
YP_004488876.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: dac:Daci_3185 class I glutamine amidotransferase
YP_004488877.1	KEGG: dac:Daci_3184 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR N-terminal; HTH transcriptional regulator, DeoR; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004488878.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: dac:Daci_3183 periplasmic-binding protein/LacI transcriptional regulator
YP_004488879.1	PFAM: ABC transporter-like; KEGG: dac:Daci_3182 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488880.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_3181 monosaccharide-transporting ATPase
YP_004488881.1	KEGG: dac:Daci_3180 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004488882.1	KEGG: dac:Daci_3179 D-tagatose-bisphosphate aldolase non-catalytic subunit; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit AgaZ; PFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit AgaZ
YP_004488883.1	PFAM: CopG-like DNA-binding; KEGG: neu:NE0289 CopG family protein
YP_004488884.1	PFAM: PilT protein, N-terminal; KEGG: neu:NE0287 PilT domain-containing protein
YP_004488885.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3178 LysR family transcriptional regulator
YP_004488886.1	PFAM: Bile acid:sodium symporter; KEGG: dac:Daci_3177 bile acid:sodium symporter
YP_004488887.1	KEGG: dac:Daci_3176 hypothetical protein
YP_004488888.1	HAMAP: Acireductone dioxygenase; KEGG: dac:Daci_3175 acireductone dioxygenase ARD; PFAM: Acireductone dioxygenase, ARD
YP_004488889.1	KEGG: dac:Daci_3174 YaeC family lipoprotein; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004488890.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_3173 binding-protein-dependent transport systems inner membrane component
YP_004488891.1	PFAM: ABC transporter-like; NIL domain; KEGG: dac:Daci_3172 DL-methionine transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004488892.1	PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; KEGG: dac:Daci_3171 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein
YP_004488893.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: dac:Daci_3170 2Fe-2S iron-sulfur cluster-binding domain-containing protein
YP_004488894.1	KEGG: dac:Daci_3169 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004488895.1	KEGG: dac:Daci_3167 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004488896.1	KEGG: dac:Daci_3166 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004488897.1	KEGG: dac:Daci_3165 hypothetical protein
YP_004488898.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3164 LysR family transcriptional regulator
YP_004488899.1	KEGG: dac:Daci_3163 hypothetical protein
YP_004488900.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_3162 hypothetical protein
YP_004488901.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_3161 LysR family transcriptional regulator
YP_004488903.1	KEGG: dac:Daci_3158 hypothetical protein
YP_004488904.1	manually curated; KEGG: dac:Daci_3157 Ypar31 protein
YP_004488906.1	KEGG: sde:Sde_2336 hypothetical protein
YP_004488908.1	KEGG: pna:Pnap_4382 hypothetical protein
YP_004488909.1	KEGG: bgf:BC1003_6092 hypothetical protein
YP_004488910.1	KEGG: bgf:BC1003_6093 hypothetical protein
YP_004488911.1	KEGG: rpb:RPB_1067 hypothetical protein
YP_004488912.1	KEGG: dac:Daci_3154 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004488913.1	KEGG: dac:Daci_3153 hypothetical protein
YP_004488914.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_3152 transport system permease
YP_004488915.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_3151 transport system permease
YP_004488916.1	PFAM: Periplasmic binding protein; KEGG: dac:Daci_3150 iron-enterobactin transporter periplasmic-binding protein
YP_004488917.1	PFAM: ABC transporter-like; KEGG: dac:Daci_3149 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488918.1	KEGG: ctt:CtCNB1_1576 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004488919.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_3147 TonB-dependent receptor
YP_004488920.1	TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: dac:Daci_3146 NtaA/SnaA/SoxA family monooxygenase
YP_004488921.1	KEGG: dac:Daci_3145 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004488922.1	KEGG: dac:Daci_3144 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004488923.1	PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; KEGG: dac:Daci_3143 intradiol ring-cleavage dioxygenase
YP_004488924.1	KEGG: dac:Daci_3142 hypothetical protein
YP_004488926.1	KEGG: vei:Veis_3802 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase
YP_004488927.1	KEGG: lch:Lcho_0435 hexapaptide repeat-containing transferase
YP_004488928.1	KEGG: dac:Daci_3139 hypothetical protein
YP_004488929.1	KEGG: dac:Daci_3138 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004488930.1	KEGG: dac:Daci_3137 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase
YP_004488931.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3136 LysR family transcriptional regulator
YP_004488932.1	KEGG: dac:Daci_3135 thiosulfate reductase cytochrome b subunit
YP_004488933.1	PFAM: Oxidoreductase, molybdopterin binding; KEGG: dac:Daci_3134 oxidoreductase molybdopterin-binding
YP_004488934.1	TIGRFAM: Pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein
YP_004488935.1	TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: dac:Daci_3132 translation initiation factor IF-1; PFAM: S1, IF1 type
YP_004488937.1	KEGG: dac:Daci_3131 gluconate transporter; TIGRFAM: Gluconate transporter; PFAM: Gluconate transporter
YP_004488938.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_3502 GCN5-related N-acetyltransferase
YP_004488939.1	PFAM: Nucleotidyltransferase; KEGG: dac:Daci_3130 DNA polymerase subunit beta
YP_004488940.1	KEGG: dac:Daci_3125 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004488941.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dac:Daci_3124 extracellular solute-binding protein
YP_004488942.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_3123 binding-protein-dependent transport systems inner membrane component
YP_004488943.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_3122 binding-protein-dependent transport systems inner membrane component
YP_004488944.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_3121 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004488945.1	PFAM: Metallophosphoesterase; KEGG: dac:Daci_3120 metallophosphoesterase
YP_004488946.1	KEGG: dac:Daci_3119 hypothetical protein; TIGRFAM: Protein of unknown function DUF11; PFAM: Protein of unknown function DUF11
YP_004488947.1	KEGG: dac:Daci_3118 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004488948.1	HAMAP: D-amino acid dehydrogenase small subunit; KEGG: dac:Daci_3117 D-amino acid dehydrogenase small subunit; PFAM: FAD dependent oxidoreductase
YP_004488949.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3116 LysR family transcriptional regulator
YP_004488950.1	PFAM: Sulfatase; KEGG: dac:Daci_3115 cerebroside-sulfatase
YP_004488951.1	KEGG: dac:Daci_3114 hypothetical protein
YP_004488952.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dac:Daci_3113 putative cobalt transport system, periplasmic-binding protein
YP_004488953.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_3112 TonB-dependent receptor
YP_004488954.1	KEGG: dac:Daci_3111 nickel responsive regulator; HAMAP: nickel-responsive regulator; PFAM: Transcription factor, NikR, nickel binding C-terminal; CopG-like DNA-binding
YP_004488955.1	KEGG: dac:Daci_3110 hypothetical protein
YP_004488956.1	PFAM: Major facilitator superfamily MFS-1; KEGG: psb:Psyr_3063 major facilitator transporter
YP_004488957.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pag:PLES_29881 putative transcriptional regulator
YP_004488958.1	KEGG: sml:Smlt2119 putative transmembrane protein
YP_004488959.1	KEGG: pay:PAU_03378 transcriptional regulator; PFAM: Rhodanese-like; SMART: Rhodanese-like; HTH transcriptional regulator, ArsR
YP_004488960.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_3109 TetR family transcriptional regulator
YP_004488961.1	PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: dac:Daci_3108 deaminase-reductase domain-containing protein
YP_004488962.1	PFAM: Nitroreductase-like; KEGG: dac:Daci_3107 nitroreductase
YP_004488963.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_3106 hypothetical protein
YP_004488964.1	KEGG: dac:Daci_3105 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004488965.1	KEGG: dac:Daci_3104 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004488966.1	KEGG: dac:Daci_3103 hypothetical protein
YP_004488967.1	KEGG: dac:Daci_3102 hypothetical protein
YP_004488968.1	KEGG: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004488969.1	PFAM: FecR protein; KEGG: anti-FecI sigma factor, FecR
YP_004488970.1	KEGG: axy:AXYL_04750 RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004488971.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: dac:Daci_3101 glutathione S-transferase domain-containing protein
YP_004488972.1	PFAM: Helix-turn-helix, HxlR type; KEGG: pop:POPTR_673908 hypothetical protein
YP_004488973.1	KEGG: dac:Daci_3099 AraC family transcriptional regulator; PFAM: Bacterial transcription activator, effector binding; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004488974.1	KEGG: hypothetical protein
YP_004488975.1	KEGG: jan:Jann_2000 hypothetical protein
YP_004488976.1	PFAM: Integrase, catalytic core, phage; KEGG: ctt:CtCNB1_1933 phage integrase
YP_004488979.1	PFAM: BRO, N-terminal; KEGG: dac:Daci_3087 prophage antirepressor
YP_004488980.1	KEGG: dac:Daci_3086 hypothetical protein
YP_004488981.1	KEGG: dac:Daci_3085 hypothetical protein
YP_004488982.1	KEGG: dac:Daci_3084 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004488983.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4755 LysR family transcriptional regulator
YP_004488984.1	KEGG: bur:Bcep18194_A4759 peptidyl-arginine deiminase; PFAM: Peptidyl-arginine deiminase, Porphyromonas-type
YP_004488985.1	KEGG: dac:Daci_3082 hypothetical protein
YP_004488986.1	KEGG: dac:Daci_3081 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004488987.1	KEGG: dac:Daci_3080 histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004488988.1	KEGG: dac:Daci_3079 response regulator receiver modulated diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region
YP_004488989.1	KEGG: dac:Daci_3078 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004488990.1	TIGRFAM: parallel beta-helix repeat; KEGG: dac:Daci_3077 hypothetical protein
YP_004488991.1	KEGG: dac:Daci_3076 hypothetical protein
YP_004488992.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_3075 PepSY-associated TM helix domain-containing protein
YP_004488993.1	KEGG: dac:Daci_3074 hypothetical protein
YP_004488994.1	KEGG: dac:Daci_3073 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C
YP_004488995.1	PFAM: Peptidoglycan binding-like; KEGG: mms:mma_1015 hypothetical protein
YP_004488996.1	PFAM: Radical SAM; KEGG: mms:mma_1014 hypothetical protein
YP_004488997.1	PFAM: Radical SAM; KEGG: mms:mma_1013 hypothetical protein
YP_004488998.1	KEGG: dac:Daci_3072 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004488999.1	KEGG: dac:Daci_3071 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004489000.1	TIGRFAM: Methionine sulphoxide reductase B; Twin-arginine translocation pathway, signal sequence; KEGG: dac:Daci_3070 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B
YP_004489001.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Cytochrome c assembly protein, transmembrane region; KEGG: dac:Daci_3069 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004489002.1	PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: dac:Daci_3068 peptide methionine sulfoxide reductase
YP_004489003.1	KEGG: dac:Daci_3067 chromate transporter; TIGRFAM: Chromate transporter; PFAM: Chromate transporter region
YP_004489004.1	KEGG: dac:Daci_3066 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004489005.1	PFAM: B3/B4 tRNA-binding domain; KEGG: dac:Daci_3065 hypothetical protein
YP_004489006.1	KEGG: dac:Daci_3064 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_004489007.1	KEGG: dac:Daci_3063 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like
YP_004489008.1	KEGG: dac:Daci_3062 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004489009.1	PFAM: Protein of unknown function DUF336; KEGG: dac:Daci_3055 hypothetical protein
YP_004489010.1	KEGG: dac:Daci_3054 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Cysteine-rich region, CCG
YP_004489011.1	KEGG: dac:Daci_3053 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004489012.1	KEGG: dac:Daci_3052 serine--glyoxylate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004489013.1	KEGG: dac:Daci_3051 hypothetical protein
YP_004489014.1	KEGG: dac:Daci_3050 small permease of tripartite tricarboxylate transporter
YP_004489015.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: dac:Daci_3049 hypothetical protein
YP_004489016.1	PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: pol:Bpro_0014 filamentation induced by cAMP protein Fic
YP_004489017.1	PFAM: Mg2+ transporter protein, CorA-like; KEGG: dac:Daci_3048 Mg2 transporter protein CorA family protein
YP_004489018.1	KEGG: dac:Daci_3047 hypothetical protein
YP_004489019.1	PFAM: Metallophosphoesterase; KEGG: dac:Daci_3046 metallophosphoesterase
YP_004489020.1	KEGG: dac:Daci_3045 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004489021.1	PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; KEGG: dac:Daci_3044 ATP-dependent DNA ligase
YP_004489022.1	KEGG: dac:Daci_3043 putative mRNA 3-end processing factor
YP_004489023.1	KEGG: dac:Daci_3042 hypothetical protein
YP_004489024.1	KEGG: dac:Daci_3041 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004489025.1	KEGG: dac:Daci_3040 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related
YP_004489026.1	KEGG: dac:Daci_3039 hypothetical protein
YP_004489027.1	PFAM: Domain of unknown function DUF1987; KEGG: dac:Daci_3038 putative lipoprotein
YP_004489028.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_3037 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004489029.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: dac:Daci_3036 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004489030.1	KEGG: rsl:RPSI07_3349 putative transcriptional regulator, DNA-binding HTH domain (GntR) and aminotransferase domain (MocR family); PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004489031.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aci:ACIAD3340 putative hydrolase
YP_004489032.1	KEGG: aci:ACIAD3341 putative arginine/lysine/ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region
YP_004489033.1	KEGG: aci:ACIAD3342 biotin carboxylase-like protein
YP_004489034.1	PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: aci:ACIAD3343 hypothetical protein
YP_004489035.1	PFAM: Sodium:dicarboxylate symporter; KEGG: vap:Vapar_1173 sodium:dicarboxylate symporter
YP_004489036.1	KEGG: bac:BamMC406_5946 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004489037.1	KEGG: axy:AXYL_01006 GabA permease; manually curated; PFAM: Amino acid permease-associated region
YP_004489038.1	PFAM: Fumarate lyase; Fumarase C, C-terminal; TIGRFAM: Aspartate ammonia-lyase; HAMAP: Fumarate hydratase class II; KEGG: reu:Reut_A1791 aspartate ammonia-lyase
YP_004489039.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_3035 major facilitator transporter
YP_004489040.1	PFAM: Beta-lactamase-related; KEGG: dac:Daci_3034 beta-lactamase
YP_004489041.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3033 LysR family transcriptional regulator
YP_004489042.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; PAS fold-4; PAS fold; KEGG: dac:Daci_5124 PAS/PAC sensor-containing diguanylate cyclase; SMART: Diguanylate cyclase, predicted; PAS; PAC motif
YP_004489043.1	PFAM: Protein of unknown function DUF1028; KEGG: dac:Daci_3032 hypothetical protein
YP_004489044.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_3031 endoribonuclease L-PSP
YP_004489045.1	PFAM: Monooxygenase, FAD-binding; KEGG: dac:Daci_3030 hypothetical protein
YP_004489046.1	KEGG: dac:Daci_3029 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004489047.1	PFAM: ABC transporter-like; KEGG: dac:Daci_3028 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489048.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_3027 inner-membrane translocator
YP_004489049.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_3026 inner-membrane translocator
YP_004489050.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_3025 extracellular ligand-binding receptor
YP_004489051.1	KEGG: dac:Daci_3024 4-hydroxyphenylacetate 3-hydroxylase; PFAM: 4-hydroxyphenylacetate 3-hydroxylase
YP_004489052.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3023 LysR family transcriptional regulator
YP_004489053.1	PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: dac:Daci_3022 deaminase-reductase domain-containing protein
YP_004489054.1	KEGG: dac:Daci_3021 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004489055.1	TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; KEGG: dac:Daci_3020 zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004489056.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dac:Daci_3019 antibiotic biosynthesis monooxygenase
YP_004489057.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3018 LysR family transcriptional regulator
YP_004489058.1	KEGG: dac:Daci_3017 hypothetical protein
YP_004489059.1	KEGG: dac:Daci_3016 hypothetical protein
YP_004489060.1	KEGG: dac:Daci_3015 peptidase M16 domain-containing protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal
YP_004489061.1	PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: zmo:ZMO1951 dimethylmenaquinone methyltransferase
YP_004489062.1	PFAM: Acetoacetate decarboxylase; KEGG: gsu:GSU2400 hypothetical protein
YP_004489063.1	KEGG: acetyL-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004489064.1	KEGG: pna:Pnap_0470 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase
YP_004489066.1	PFAM: Crotonase, core; KEGG: hoh:Hoch_4783 enoyl-CoA hydratase/isomerase
YP_004489067.1	PFAM: Amidohydrolase 2; KEGG: fre:Franean1_3097 amidohydrolase 2
YP_004489068.1	KEGG: pfl:PFL_2716 quinone family NAD(P)H dehydrogenase; PFAM: Flavodoxin-like fold
YP_004489069.1	PFAM: Crotonase, core; KEGG: bxe:Bxe_C0835 enoyl-CoA hydratase
YP_004489070.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: bav:BAV3062 indolepyruvate ferredoxin oxidoreductase
YP_004489072.1	KEGG: bur:Bcep18194_B1553 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI; SMART: Helix-turn-helix, AraC domain
YP_004489073.1	PFAM: Cyclic nucleotide-binding; KEGG: hse:Hsero_4703 cyclic nucleotide-binding protein
YP_004489074.1	PFAM: DSBA oxidoreductase; KEGG: axy:AXYL_00332 DsbA-like thioredoxin domain-containing protein 2
YP_004489075.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: rpe:RPE_2302 glutathione S-transferase
YP_004489076.1	PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: dac:Daci_3013 GMP synthase
YP_004489077.1	KEGG: dac:Daci_3012 hypothetical protein
YP_004489078.1	TIGRFAM: Prevent-host-death protein; KEGG: dac:Daci_3011 prevent-host-death family protein
YP_004489079.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3010 LysR family transcriptional regulator
YP_004489080.1	PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: dac:Daci_3009 dihydroxy-acid dehydratase
YP_004489081.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: dac:Daci_3008 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core
YP_004489082.1	KEGG: dac:Daci_3007 hypothetical protein
YP_004489083.1	PFAM: Uncharacterised protein family UPF0125; KEGG: dac:Daci_3006 hypothetical protein
YP_004489084.1	PFAM: Streptomyces cyclase/dehydrase; KEGG: dac:Daci_3005 cyclase/dehydrase
YP_004489085.1	TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: dac:Daci_3004 SsrA-binding protein; PFAM: SsrA-binding protein
YP_004489086.1	KEGG: dac:Daci_3003 hypothetical protein
YP_004489087.1	KEGG: dac:Daci_3002 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004489088.1	KEGG: dac:Daci_3001 putative transmembrane anti-sigma factor
YP_004489089.1	KEGG: dac:Daci_3000 hypothetical protein
YP_004489090.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_2999 TetR family transcriptional regulator
YP_004489091.1	KEGG: dac:Daci_2998 3-hydroxyisobutyryl-CoA hydrolase; PFAM: Crotonase, core
YP_004489092.1	KEGG: dac:Daci_2997 hypothetical protein
YP_004489093.1	KEGG: dac:Daci_2996 hypothetical protein
YP_004489094.1	KEGG: dac:Daci_2995 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004489095.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2994 LysR family transcriptional regulator
YP_004489096.1	KEGG: dac:Daci_2993 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal
YP_004489097.1	KEGG: dac:Daci_2992 tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; PFAM: Pseudouridine synthase II, TruB, N-terminal
YP_004489098.1	KEGG: dac:Daci_2991 ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; PFAM: Ribosome-binding factor A
YP_004489099.1	KEGG: dac:Daci_2990 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2
YP_004489100.1	KEGG: dac:Daci_2989 NusA antitermination factor; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain
YP_004489101.1	manually curated; HAMAP: Uncharacterised protein family UPF0090, bacteria; KEGG: dac:Daci_2988 hypothetical protein; PFAM: Uncharacterised protein family UPF0090
YP_004489102.1	PFAM: Thioredoxin domain; KEGG: dac:Daci_2987 thioredoxin domain-containing protein
YP_004489103.1	KEGG: dac:Daci_2986 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004489104.1	KEGG: dac:Daci_2985 cytochrome c553-like protein
YP_004489105.1	KEGG: dac:Daci_2984 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004489106.1	KEGG: dac:Daci_2983 MerR family transcriptional regulator
YP_004489107.1	KEGG: dac:Daci_2978 hypothetical protein
YP_004489108.1	PFAM: Lipocalin-like; KEGG: dac:Daci_2977 lipocalin family protein
YP_004489109.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dac:Daci_2976 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489110.1	KEGG: dac:Daci_2975 binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004489111.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_2974 binding-protein-dependent transport systems inner membrane component
YP_004489112.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dac:Daci_2973 extracellular solute-binding protein
YP_004489113.1	KEGG: dac:Daci_2972 short-chain dehydrogenase/reductase SDR
YP_004489114.1	KEGG: dac:Daci_2971 hypothetical protein
YP_004489115.1	PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: dac:Daci_2970 superoxide dismutase
YP_004489116.1	PFAM: Zinc/iron permease; KEGG: dac:Daci_2969 zinc/iron permease
YP_004489117.1	KEGG: dac:Daci_2968 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004489118.1	KEGG: dac:Daci_2967 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase
YP_004489119.1	KEGG: dac:Daci_2966 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004489120.1	KEGG: dac:Daci_2965 hypothetical protein
YP_004489121.1	KEGG: dac:Daci_2964 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal
YP_004489122.1	PFAM: Nodulation efficiency, NfeD; KEGG: dac:Daci_2963 hypothetical protein
YP_004489123.1	KEGG: dac:Daci_2962 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_004489124.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: dac:Daci_2961 4-oxalocrotonate tautomerase
YP_004489125.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2960 LysR family transcriptional regulator
YP_004489126.1	KEGG: dac:Daci_2959 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004489127.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: dac:Daci_2958 flavin-containing monooxygenase
YP_004489128.1	KEGG: dac:Daci_2957 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004489131.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; PAS fold-4; Signal transduction response regulator, receiver region; KEGG: dac:Daci_2956 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Signal transduction response regulator, receiver region
YP_004489132.1	KEGG: dac:Daci_2955 hypothetical protein
YP_004489133.1	KEGG: dac:Daci_2954 hypothetical protein
YP_004489134.1	KEGG: dac:Daci_2953 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004489135.1	PFAM: FecR protein; Cupin 2, conserved barrel; KEGG: dac:Daci_2952 anti-FecI sigma factor FecR
YP_004489136.1	KEGG: dac:Daci_2951 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004489137.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2950 LysR family transcriptional regulator
YP_004489138.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2949 major facilitator transporter
YP_004489139.1	PFAM: Tetratricopeptide TPR-1; KEGG: dac:Daci_2948 TPR repeat-containing protein
YP_004489140.1	KEGG: dac:Daci_2947 hypothetical protein
YP_004489141.1	KEGG: dac:Daci_2946 hypothetical protein
YP_004489142.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dac:Daci_2945 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004489143.1	KEGG: dac:Daci_2944 hypothetical protein
YP_004489144.1	KEGG: dac:Daci_2943 bacteriophage N4 adsorption protein B
YP_004489145.1	PFAM: Tetratricopeptide TPR-1; KEGG: dac:Daci_2942 TPR repeat-containing protein
YP_004489146.1	KEGG: dac:Daci_2941 hypothetical protein
YP_004489147.1	KEGG: dac:Daci_2940 cell morphology protein
YP_004489148.1	PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: dac:Daci_2939 membrane bound O-acyl transferase MBOAT family protein
YP_004489149.1	PFAM: Phosphopantetheine-binding; KEGG: dac:Daci_2938 phosphopantetheine-binding
YP_004489150.1	KEGG: dac:Daci_2937 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004489151.1	KEGG: dac:Daci_2936 cell morphology protein
YP_004489152.1	KEGG: dac:Daci_2935 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004489153.1	KEGG: dac:Daci_2934 hypothetical protein
YP_004489154.1	KEGG: dac:Daci_2923 sodium:dicarboxylate symporter; HAMAP: C4-dicarboxylate transport protein; PFAM: Sodium:dicarboxylate symporter
YP_004489155.1	KEGG: dac:Daci_2922 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004489156.1	KEGG: dac:Daci_2921 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004489157.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_2920 porin
YP_004489159.1	KEGG: dac:Daci_2919 hypothetical protein
YP_004489160.1	PFAM: Mammalian cell entry related; KEGG: dac:Daci_2918 hypothetical protein
YP_004489161.1	PFAM: Protein of unknown function DUF140; KEGG: dac:Daci_2917 ABC-type transport system permease
YP_004489162.1	KEGG: dac:Daci_2916 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004489163.1	TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dac:Daci_2915 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase
YP_004489164.1	KEGG: dac:Daci_2914 hypothetical protein
YP_004489165.1	KEGG: dac:Daci_2912 hypothetical protein
YP_004489166.1	KEGG: dac:Daci_2911 copper tolerance protein
YP_004489167.1	PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: dac:Daci_2910 multicopper oxidase type 3
YP_004489168.1	PFAM: Blue (type 1) copper domain; KEGG: dac:Daci_2909 blue (type1) copper domain-containing protein
YP_004489169.1	PFAM: Protein of unknown function DUF411; KEGG: dac:Daci_2908 hypothetical protein
YP_004489170.1	KEGG: dac:Daci_2907 hypothetical protein
YP_004489171.1	PFAM: Peptidase S58, DmpA; KEGG: dac:Daci_2906 peptidase S58 DmpA
YP_004489172.1	KEGG: dac:Daci_2905 monooxygenase FAD-binding; PFAM: FAD dependent oxidoreductase
YP_004489173.1	KEGG: dac:Daci_2904 hypothetical protein
YP_004489174.1	TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: dac:Daci_2903 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004489175.1	KEGG: dac:Daci_2902 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004489176.1	PFAM: Peptidase M14, carboxypeptidase A; KEGG: dac:Daci_2901 peptidase M14, carboxypeptidase A
YP_004489177.1	KEGG: dac:Daci_2897 hypothetical protein
YP_004489179.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_2896 TonB-dependent receptor
YP_004489180.1	PFAM: DR1885-like metal-binding protein; KEGG: dac:Daci_2895 hypothetical protein
YP_004489181.1	KEGG: dac:Daci_2894 hypothetical protein
YP_004489182.1	KEGG: dac:Daci_2893 hypothetical protein
YP_004489183.1	KEGG: dac:Daci_2892 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase
YP_004489184.1	KEGG: dac:Daci_2891 hypothetical protein
YP_004489185.1	PFAM: DR1885-like metal-binding protein; KEGG: dac:Daci_2890 hypothetical protein
YP_004489186.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2889 LysR family transcriptional regulator
YP_004489187.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_2888 isochorismatase hydrolase
YP_004489188.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_2887 isochorismatase hydrolase
YP_004489189.1	KEGG: dac:Daci_2886 Tfp pilus assembly protein PilE-like protein
YP_004489190.1	PFAM: Neisseria PilC; Pyrrolo-quinoline quinone repeat; KEGG: dac:Daci_2885 fimbrial assembly protein
YP_004489191.1	KEGG: dac:Daci_2884 type 4 fimbrial biogenesis protein PilX
YP_004489192.1	KEGG: dac:Daci_2883 Tfp pilus assembly protein PilW-like protein
YP_004489193.1	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: dac:Daci_2882 type IV pilus modification protein PilV
YP_004489194.1	KEGG: dac:Daci_2881 Tfp pilus assembly protein FimT-like protein
YP_004489195.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dac:Daci_2880 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004489196.1	KEGG: dac:Daci_2879 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004489197.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: dac:Daci_2878 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004489198.1	SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: dac:Daci_2877 excinuclease ABC subunit C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif
YP_004489199.1	KEGG: dac:Daci_2876 hypothetical protein
YP_004489200.1	KEGG: dac:Daci_2875 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase
YP_004489201.1	KEGG: dac:Daci_2874 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004489202.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2873 LysR family transcriptional regulator
YP_004489203.1	PFAM: Uncharacterised conserved protein UCP015557; KEGG: dac:Daci_2872 hypothetical protein
YP_004489204.1	TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; KEGG: dac:Daci_2871 elongation factor P; SMART: Elongation factor P, C-terminal
YP_004489205.1	PFAM: Protein of unknown function DUF2239; KEGG: dac:Daci_2870 hypothetical protein
YP_004489206.1	KEGG: dac:Daci_2869 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_004489207.1	PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: dac:Daci_2868 alcohol dehydrogenase
YP_004489208.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: dac:Daci_2867 ribosomal protein S12 methylthiotransferase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM
YP_004489209.1	KEGG: scl:sce7721 protein kinase; manually curated; SMART: Serine/threonine-protein kinase domain
YP_004489210.1	PFAM: Protein of unknown function DUF2514; KEGG: dac:Daci_2639 hypothetical protein
YP_004489211.1	PFAM: Peptidase M15A, C-terminal; KEGG: bgl:bglu_1g17320 hypothetical protein
YP_004489214.1	KEGG: pop:POPTR_791597 hypothetical protein
YP_004489215.1	KEGG: pop:POPTR_791597 hypothetical protein
YP_004489216.1	KEGG: dac:Daci_3257 hypothetical protein
YP_004489217.1	KEGG: pop:POPTR_595161 hypothetical protein
YP_004489218.1	KEGG: dac:Daci_4676 hypothetical protein
YP_004489219.1	KEGG: aav:Aave_1601 ParB-like partition protein
YP_004489220.1	KEGG: pop:POPTR_794426 hypothetical protein
YP_004489221.1	KEGG: pna:Pnap_2473 hypothetical protein
YP_004489222.1	KEGG: pcr:Pcryo_1121 hypothetical protein
YP_004489223.1	manually curated; KEGG: amr:AM1_1177 hypothetical protein
YP_004489224.1	KEGG: dac:Daci_2866 polyhydroxyalkonate synthesis repressor PhaR; TIGRFAM: Polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding, N-terminal; PHB accumulation regulatory
YP_004489225.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: dac:Daci_2865 amidase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004489226.1	TIGRFAM: D-hydantoinase; KEGG: dac:Daci_2864 phenylhydantoinase; PFAM: Amidohydrolase 1
YP_004489227.1	KEGG: dac:Daci_2863 NCS1 nucleoside transporter; TIGRFAM: Nucleobase cation symporter-1, NCS1; PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin
YP_004489228.1	TIGRFAM: Dihydroorotate dehydrogenase, class 1, core; KEGG: dac:Daci_2862 dihydropyrimidine dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004489229.1	KEGG: dac:Daci_2861 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004489230.1	PFAM: Transcriptional regulator, YcdC, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_2860 TetR family transcriptional regulator
YP_004489231.1	KEGG: dac:Daci_2859 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004489232.1	PFAM: Protein of unknown function DUF1801; KEGG: bte:BTH_II1623 hypothetical protein
YP_004489233.1	TIGRFAM: RelA/SpoT protein; KEGG: dac:Daci_2856 (p)ppGpp synthetase I SpoT/RelA; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT
YP_004489234.1	KEGG: dac:Daci_2855 alpha/beta hydrolase fold protein; manually curated; PFAM: Alpha/beta hydrolase fold-1
YP_004489235.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; KEGG: dac:Daci_2854 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004489236.1	PFAM: Protein of unknown function DUF541; KEGG: dac:Daci_2853 hypothetical protein
YP_004489237.1	KEGG: dac:Daci_2852 osmolarity response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004489238.1	KEGG: dac:Daci_2851 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004489239.1	PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: dac:Daci_2850 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_004489240.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: dac:Daci_2849 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_004489241.1	TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; KEGG: dac:Daci_2848 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004489242.1	KEGG: dac:Daci_2847 hypothetical protein
YP_004489243.1	TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: dac:Daci_2846 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase
YP_004489244.1	KEGG: dac:Daci_2096 resolvase domain-containing protein; manually curated; PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region
YP_004489246.1	PFAM: Zonular occludens toxin; KEGG: aav:Aave_2402 zonular occludens toxin
YP_004489247.1	KEGG: aav:Aave_2403 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2523
YP_004489248.1	KEGG: aav:Aave_2393 hypothetical protein
YP_004489249.1	KEGG: aav:Aave_2405 hypothetical protein
YP_004489252.1	KEGG: dac:Daci_2102 putative phage associated protein
YP_004489253.1	manually curated; TIGRFAM: Phage/plasmid replication protein, gene II/X; KEGG: neu:NE0888 hypothetical protein; PFAM: Phage/plasmid replication protein, gene II/X
YP_004489256.1	KEGG: dac:Daci_2845 hypothetical protein
YP_004489257.1	KEGG: dac:Daci_2842 hypothetical protein
YP_004489258.1	KEGG: dac:Daci_2841 YaeC family lipoprotein; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004489259.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_2840 hypothetical protein
YP_004489260.1	KEGG: dac:Daci_2839 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004489261.1	KEGG: dac:Daci_2838 hypothetical protein
YP_004489262.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_2837 lysine exporter protein LysE/YggA
YP_004489263.1	KEGG: dac:Daci_2836 chromosome replication initiation inhibitor protein; TIGRFAM: Transcriptional regulator, ArgP; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004489264.1	KEGG: dac:Daci_2835 hypothetical protein
YP_004489265.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2834 LysR family transcriptional regulator
YP_004489266.1	KEGG: dac:Daci_2833 hypothetical protein
YP_004489267.1	KEGG: dac:Daci_2832 amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: Peptidase M20, dimerisation
YP_004489268.1	KEGG: dac:Daci_2831 hypothetical protein
YP_004489269.1	PFAM: SlyX; KEGG: dac:Daci_2830 SlyX family protein
YP_004489270.1	KEGG: dac:Daci_2829 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/II
YP_004489271.1	KEGG: dac:Daci_2828 hypothetical protein
YP_004489272.1	PFAM: Amidase; KEGG: dac:Daci_2827 amidase
YP_004489273.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2826 LysR family transcriptional regulator
YP_004489274.1	PFAM: Protein of unknown function DUF1016; KEGG: dac:Daci_2825 hypothetical protein
YP_004489275.1	SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: dac:Daci_2824 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004489276.1	KEGG: dac:Daci_2823 hypothetical protein
YP_004489277.1	KEGG: dac:Daci_2822 hypothetical protein
YP_004489278.1	KEGG: dac:Daci_2821 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004489279.1	KEGG: dac:Daci_2820 hypothetical protein
YP_004489280.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2819 LysR family transcriptional regulator
YP_004489281.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_2818 GCN5-related N-acetyltransferase
YP_004489282.1	KEGG: dac:Daci_2817 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004489283.1	PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like, core; TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; KEGG: dac:Daci_2816 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_004489284.1	KEGG: dac:Daci_2815 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004489285.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: dac:Daci_2814 putative aldolase
YP_004489286.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2813 major facilitator transporter
YP_004489287.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: dac:Daci_2812 NAD-dependent epimerase/dehydratase
YP_004489288.1	KEGG: dac:Daci_2811 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004489289.1	PFAM: Protein of unknown function, DUF1537; KEGG: dac:Daci_2810 type III effector Hrp-dependent outers
YP_004489290.1	KEGG: dac:Daci_2809 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain
YP_004489291.1	PFAM: Aspartate/homoserine dehydrogenase, NAD-binding; KEGG: dac:Daci_2808 hypothetical protein
YP_004489292.1	manually curated; KEGG: dsa:Desal_1508 hypothetical protein
YP_004489293.1	KEGG: dac:Daci_2807 hypothetical protein
YP_004489294.1	TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: dac:Daci_2806 cobyric acid synthase CobQ; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase
YP_004489295.1	PFAM: Aminotransferase, class I/II; KEGG: dac:Daci_2805 class I/II aminotransferase
YP_004489296.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiB; HAMAP: Cobalamin biosynthesis protein cbiB; KEGG: dac:Daci_2804 cobalamin biosynthesis protein CobD; PFAM: Cobalamin (vitamin B12) biosynthesis CbiB
YP_004489297.1	KEGG: dac:Daci_2803 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase-like
YP_004489298.1	TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: dac:Daci_2802 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR
YP_004489299.1	KEGG: dac:Daci_2801 Asp/Glu racemase
YP_004489300.1	KEGG: dac:Daci_2798 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004489301.1	KEGG: dac:Daci_2797 hypothetical protein; PFAM: Aminotransferase class-III
YP_004489302.1	PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: dac:Daci_2796 RpiR family transcriptional regulator
YP_004489303.1	KEGG: dac:Daci_2795 3''-kinase; PFAM: Aminoglycoside/hydroxyurea antibiotic resistance kinase
YP_004489304.1	PFAM: ABC transporter-like; KEGG: dac:Daci_2794 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489305.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_2793 transport system permease
YP_004489306.1	PFAM: Periplasmic binding protein; KEGG: dac:Daci_2792 periplasmic-binding protein
YP_004489307.1	KEGG: dac:Daci_2791 cobalbumin biosynthesis protein; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase
YP_004489308.1	PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase; KEGG: dac:Daci_2790 glutamine amidotransferase
YP_004489309.1	KEGG: dac:Daci_2789 hypothetical protein
YP_004489310.1	PFAM: Cell division protein ZapA-like; KEGG: dac:Daci_2788 hypothetical protein
YP_004489311.1	PFAM: Protein of unknown function DUF81; KEGG: dac:Daci_2787 hypothetical protein
YP_004489312.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: dac:Daci_2786 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004489313.1	KEGG: dac:Daci_2785 metal dependent phosphohydrolase; TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain
YP_004489314.1	KEGG: dac:Daci_2784 hypothetical protein
YP_004489315.1	TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: dac:Daci_2783 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004489316.1	manually curated; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; KEGG: dac:Daci_2782 Crp/FNR family transcriptional regulator; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding
YP_004489317.1	KEGG: dac:Daci_2781 hypothetical protein
YP_004489318.1	KEGG: dac:Daci_2780 hypothetical protein
YP_004489319.1	TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: dac:Daci_2779 cytochrome c oxidase accessory protein CcoG
YP_004489320.1	KEGG: dac:Daci_2778 cytochrome c oxidase, cbb3-type subunit III; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit III; PFAM: Cytochrome c, class I
YP_004489321.1	KEGG: dac:Daci_2777 Cbb3-type cytochrome oxidase component
YP_004489322.1	KEGG: dac:Daci_2776 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: Cytochrome C oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, monohaem subunit/FixO
YP_004489323.1	TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; KEGG: dac:Daci_2775 cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I
YP_004489324.1	KEGG: dac:Daci_2774 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type
YP_004489325.1	TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dac:Daci_2773 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_004489326.1	PFAM: UspA; KEGG: dac:Daci_2772 UspA domain-containing protein
YP_004489327.1	KEGG: dac:Daci_2771 malonyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase
YP_004489328.1	KEGG: dac:Daci_2770 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004489329.1	KEGG: dac:Daci_2769 hypothetical protein
YP_004489330.1	PFAM: Crotonase, core; KEGG: dac:Daci_2768 enoyl-CoA hydratase/isomerase
YP_004489331.1	KEGG: dac:Daci_2767 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004489332.1	KEGG: dac:Daci_2766 hypothetical protein
YP_004489333.1	KEGG: dac:Daci_2765 hypothetical protein
YP_004489334.1	KEGG: dac:Daci_2764 malonyl-CoA decarboxylase; PFAM: Malonyl-CoA decarboxylase
YP_004489335.1	KEGG: dac:Daci_2763 prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase
YP_004489336.1	KEGG: dac:Daci_2762 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004489337.1	KEGG: dac:Daci_2761 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004489338.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2760 major facilitator transporter
YP_004489339.1	PFAM: CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type; KEGG: dac:Daci_2759 CoA-binding domain-containing protein
YP_004489340.1	PFAM: Crotonase, core; KEGG: dac:Daci_2758 p-hydroxycinnamoyl CoA hydratase/lyase
YP_004489341.1	KEGG: dac:Daci_2757 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_004489342.1	PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: dac:Daci_2756 dihydroxy-acid dehydratase
YP_004489343.1	KEGG: dac:Daci_2750 hypothetical protein
YP_004489344.1	PFAM: Cytochrome c, class I; KEGG: dac:Daci_2749 class I cytochrome c
YP_004489345.1	KEGG: dac:Daci_2748 hypothetical protein
YP_004489346.1	PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: dac:Daci_2747 acetate--CoA ligase
YP_004489347.1	KEGG: dac:Daci_2746 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0114, bacteria; PFAM: Uncharacterised protein family UPF0114, prokaryotic
YP_004489348.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: dac:Daci_2668 glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core
YP_004489349.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_2667 binding-protein-dependent transport systems inner membrane component
YP_004489350.1	PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: dac:Daci_2666 glycine betaine transporter periplasmic subunit
YP_004489351.1	KEGG: dac:Daci_2665 PTS system fructose subfamily transporter subunit IIC; TIGRFAM: Phosphotransferase system, fructose IIC component; Phosphotransferase system, fructose-specific IIB subunit; PFAM: Phosphotransferase system, fructose-specific IIB subunit; Phosphotransferase system, EIIC
YP_004489352.1	TIGRFAM: 1-phosphofructokinase; KEGG: dac:Daci_2664 1-phosphofructokinase; PFAM: Carbohydrate/purine kinase
YP_004489353.1	TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system, phosphocarrier HPr protein; KEGG: dac:Daci_2663 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region
YP_004489354.1	KEGG: dac:Daci_2662 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004489355.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dac:Daci_2661 sulphate transporter
YP_004489356.1	PFAM: Putative ParB-like nuclease; KEGG: dac:Daci_2660 putative ParB-like nuclease
YP_004489357.1	KEGG: dac:Daci_2659 hypothetical protein
YP_004489358.1	KEGG: dac:Daci_2658 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004489359.1	KEGG: dac:Daci_2657 major facilitator transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004489360.1	PFAM: Putative esterase; KEGG: dac:Daci_2656 putative esterase
YP_004489361.1	PFAM: Fumarate lyase; Fumarase C, C-terminal; TIGRFAM: Fumarate hydratase, class II; HAMAP: Fumarate hydratase class II; KEGG: dac:Daci_2655 fumarate hydratase
YP_004489362.1	TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: dac:Daci_2654 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; Fe-S type hydro-lyases tartrate/fumarate alpha region
YP_004489363.1	PFAM: Methyltransferase type 11; KEGG: dac:Daci_2653 type 11 methyltransferase
YP_004489364.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_2652 GCN5-related N-acetyltransferase
YP_004489365.1	PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: dac:Daci_2651 glutamate racemase
YP_004489366.1	PFAM: Protein of unknown function DUF45; KEGG: dac:Daci_2650 hypothetical protein
YP_004489367.1	KEGG: dac:Daci_2649 hypothetical protein
YP_004489368.1	PFAM: Transposase, mutator type; KEGG: rme:Rmet_2268 transposase, mutator type
YP_004489369.1	SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: dac:Daci_2647 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core
YP_004489370.1	TIGRFAM: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; KEGG: dac:Daci_2646 ATP-dependent protease ATP-binding subunit ClpX; SMART: ATPase, AAA+ type, core
YP_004489371.1	TIGRFAM: Peptidase S14, ClpP; KEGG: dac:Daci_2645 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP
YP_004489372.1	KEGG: dac:Daci_2644 trigger factor; TIGRFAM: Trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Trigger factor, C-terminal, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004489373.1	KEGG: rsl:RPSI07_mp0365 hypothetical protein
YP_004489374.1	KEGG: dac:Daci_3451 hypothetical protein
YP_004489375.1	KEGG: mca:MCA2675 hypothetical protein
YP_004489376.1	KEGG: pna:Pnap_2244 hypothetical protein
YP_004489377.1	KEGG: pna:Pnap_2245 hypothetical protein
YP_004489378.1	KEGG: eba:ebB249 hypothetical protein
YP_004489379.1	KEGG: pna:Pnap_2248 TP901 family phage tail tape measure protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region
YP_004489380.1	KEGG: hypothetical protein
YP_004489381.1	KEGG: pna:Pnap_2250 hypothetical protein
YP_004489382.1	KEGG: ctt:CtCNB1_3571 hypothetical protein
YP_004489383.1	KEGG: aav:Aave_2383 hypothetical protein
YP_004489384.1	KEGG: aav:Aave_2381 hypothetical protein
YP_004489385.1	KEGG: aav:Aave_2380 methyltransferase type 11; manually curated; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004489386.1	KEGG: aav:Aave_2379 hypothetical protein
YP_004489387.1	KEGG: aav:Aave_2378 GP68
YP_004489388.1	KEGG: aav:Aave_2376 hypothetical protein
YP_004489389.1	PFAM: Protein of unknown function DUF1983; KEGG: aav:Aave_2375 hypothetical protein
YP_004489390.1	KEGG: aav:Aave_2374 hypothetical protein
YP_004489392.1	KEGG: aav:Aave_2372 hypothetical protein
YP_004489393.1	KEGG: aav:Aave_2371 hypothetical protein
YP_004489394.1	KEGG: aav:Aave_2370 hypothetical protein
YP_004489395.1	KEGG: aav:Aave_2369 hypothetical protein
YP_004489396.1	KEGG: aav:Aave_2368 hypothetical protein
YP_004489397.1	KEGG: aav:Aave_2367 hypothetical protein
YP_004489398.1	KEGG: aav:Aave_2366 hypothetical protein
YP_004489399.1	KEGG: aav:Aave_2365 hypothetical protein
YP_004489400.1	KEGG: aav:Aave_2364 hypothetical protein
YP_004489401.1	KEGG: aav:Aave_2363 hypothetical protein
YP_004489402.1	KEGG: aav:Aave_1729 putative endolysin (lysis protein) (lysozyme)
YP_004489403.1	KEGG: hypothetical protein
YP_004489404.1	KEGG: aav:Aave_2355 hypothetical protein
YP_004489405.1	KEGG: aav:Aave_2354 hypothetical protein
YP_004489406.1	KEGG: ngo:NGO1098 putative phage associated protein; TIGRFAM: Phage terminase, large subunit, PBSX; PFAM: Phage terminase large subunit; Protein of unknown function DUF1545
YP_004489407.1	PFAM: Terminase small subunit; KEGG: aav:Aave_1698 terminase small subunit
YP_004489408.1	manually curated; KEGG: aav:Aave_2349 hypothetical protein
YP_004489409.1	KEGG: vap:Vapar_2458 hypothetical protein
YP_004489410.1	KEGG: bpt:Bpet0969 hypothetical protein
YP_004489411.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: bpt:Bpet0963 putative transcriptional regulator
YP_004489413.1	KEGG: dac:Daci_2617 transcriptional activator Ogr/delta; manually curated; PFAM: Phage transcriptional activator, Ogr/Delta
YP_004489414.1	KEGG: dac:Daci_2612 HipA domain-containing protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal
YP_004489415.1	KEGG: dac:Daci_2611 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004489416.1	PFAM: Acriflavin resistance protein; KEGG: dac:Daci_2575 acriflavin resistance protein
YP_004489417.1	KEGG: dac:Daci_2574 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004489418.1	KEGG: dac:Daci_2573 squalene synthase HpnC; TIGRFAM: Squalene synthase HpnC; PFAM: Squalene/phytoene synthase
YP_004489419.1	TIGRFAM: Squalene/phytoene synthase HpnD; KEGG: dac:Daci_2572 squalene synthase HpnD; PFAM: Squalene/phytoene synthase
YP_004489420.1	KEGG: dac:Daci_2571 squalene-associated FAD-dependent desaturase; TIGRFAM: Squalene-associated FAD-dependent desaturase; PFAM: Amine oxidase; FAD dependent oxidoreductase
YP_004489421.1	KEGG: dac:Daci_2570 hypothetical protein
YP_004489422.1	KEGG: dac:Daci_2569 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004489423.1	KEGG: dac:Daci_2568 carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase
YP_004489424.1	KEGG: dac:Daci_2567 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004489425.1	KEGG: dac:Daci_2566 hypothetical protein
YP_004489426.1	KEGG: dac:Daci_2565 hypothetical protein
YP_004489427.1	PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: dac:Daci_2564 integral membrane protein
YP_004489428.1	KEGG: dac:Daci_2563 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_004489429.1	PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: dac:Daci_2562 ferrochelatase
YP_004489430.1	KEGG: dac:Daci_2561 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004489431.1	PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: dac:Daci_2560 hypothetical protein
YP_004489432.1	KEGG: dac:Daci_2559 hypothetical protein
YP_004489433.1	KEGG: dac:Daci_4225 hypothetical protein
YP_004489434.1	KEGG: mrd:Mrad2831_4674 hypothetical protein
YP_004489435.1	KEGG: dac:Daci_2558 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004489436.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_2557 alpha/beta hydrolase fold protein
YP_004489437.1	KEGG: dac:Daci_2556 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase, putative
YP_004489438.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_2555 inner-membrane translocator
YP_004489439.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_2554 inner-membrane translocator
YP_004489440.1	KEGG: dac:Daci_2553 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004489441.1	PFAM: ABC transporter-like; KEGG: dac:Daci_2552 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489442.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_2551 extracellular ligand-binding receptor
YP_004489443.1	PFAM: Methionine synthase, vitamin-B12 independent; KEGG: dac:Daci_2550 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
YP_004489444.1	PFAM: Protein of unknown function DUF1852; KEGG: dac:Daci_2549 hypothetical protein
YP_004489445.1	KEGG: dac:Daci_2548 FMN reductase; TIGRFAM: FMN reductase, MsuE-like; PFAM: NADPH-dependent FMN reductase
YP_004489446.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2547 LysR family transcriptional regulator
YP_004489447.1	KEGG: dac:Daci_2546 hypothetical protein
YP_004489448.1	KEGG: dac:Daci_2545 extracellular solute-binding protein
YP_004489449.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_2544 porin
YP_004489450.1	KEGG: rsl:RPSI07_mp1551 hypothetical protein
YP_004489451.1	SMART: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; KEGG: bte:BTH_II2004 adenylosuccinate synthase; PFAM: Adenylosuccinate synthetase
YP_004489452.1	manually curated; KEGG: adenylosuccinate synthase
YP_004489453.1	KEGG: transposase IS3/is911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_004489454.1	PFAM: DNA helicase, UvrD/REP type; KEGG: pmr:PMI2434 plasmid-related helicase
YP_004489455.1	PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: pmr:PMI2435 plasmid-related protein
YP_004489456.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: dac:Daci_4113 putative phage repressor
YP_004489457.1	KEGG: dac:Daci_2537 hypothetical protein
YP_004489458.1	KEGG: dac:Daci_2536 hypothetical protein
YP_004489459.1	KEGG: dac:Daci_2535 hypothetical protein
YP_004489460.1	KEGG: dac:Daci_2534 hypothetical protein
YP_004489461.1	KEGG: dac:Daci_2531 hypothetical protein
YP_004489462.1	KEGG: dac:Daci_2530 putative sigma-54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold-4; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004489463.1	KEGG: dac:Daci_2529 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004489464.1	KEGG: ctt:CtCNB1_3690 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004489465.1	PFAM: Periplasmic binding protein; KEGG: axy:AXYL_05456 ferric anguibactin-binding protein
YP_004489466.1	PFAM: Bacterial transport system permease protein; KEGG: ppu:PP_2593 ferric siderophore ABC transporter, permease protein
YP_004489467.1	PFAM: Bacterial transport system permease protein; KEGG: ctt:CtCNB1_3694 transport system permease protein
YP_004489468.1	PFAM: ABC transporter-like; KEGG: axy:AXYL_05460 ABC transporter transmembrane region family protein 4; SMART: ATPase, AAA+ type, core
YP_004489469.1	PFAM: ABC transporter-like; KEGG: pen:PSEEN2498 ABC transporter permease/ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004489470.1	PFAM: FecR protein; KEGG: axy:AXYL_05945 FecR family protein 27
YP_004489471.1	KEGG: axy:AXYL_05944 RNA polymerase sigma factor FecI 17; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004489472.1	PFAM: Lipase, GDSL; KEGG: dac:Daci_2528 GDSL family lipase
YP_004489473.1	manually curated; KEGG: dac:Daci_2527 hypothetical protein
YP_004489475.1	KEGG: dac:Daci_4482 YD repeat-containing protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: RHS protein; YD repeat
YP_004489476.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: dac:Daci_2520 hypothetical protein
YP_004489477.1	KEGG: dac:Daci_2519 hypothetical protein
YP_004489478.1	KEGG: dac:Daci_2518 hypothetical protein
YP_004489479.1	KEGG: dac:Daci_2517 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004489480.1	KEGG: dac:Daci_2516 histidine kinase; PFAM: Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004489481.1	KEGG: dac:Daci_2515 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4
YP_004489482.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: dac:Daci_2514 xanthine/uracil/vitamin C permease
YP_004489483.1	TIGRFAM: Guanine deaminase; KEGG: dac:Daci_2513 guanine deaminase; PFAM: Amidohydrolase 1
YP_004489484.1	KEGG: dac:Daci_2512 pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_004489485.1	KEGG: dac:Daci_2511 aspartate kinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT
YP_004489486.1	TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: dac:Daci_2510 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop; Lysidine-tRNA(Ile) synthetase, substrate-binding domain
YP_004489487.1	PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: dac:Daci_2509 acetyl-CoA carboxylase, carboxyl transferase subunit alpha
YP_004489488.1	KEGG: dac:Daci_2508 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain
YP_004489489.1	TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: dac:Daci_2507 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR
YP_004489490.1	PFAM: Tetratricopeptide TPR-1; KEGG: dac:Daci_2506 TPR repeat-containing protein
YP_004489491.1	KEGG: dac:Daci_2505 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_004489492.1	PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: dac:Daci_2504 peptidyl-prolyl cis-trans isomerase cyclophilin type
YP_004489493.1	TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; HAMAP: UDP-2,3-diacylglucosamine hydrolase; KEGG: dac:Daci_2503 UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallophosphoesterase
YP_004489494.1	PFAM: Protein of unknown function DUF980; KEGG: dac:Daci_2502 hypothetical protein
YP_004489495.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_2501 LysR family transcriptional regulator
YP_004489496.1	PFAM: Protein of unknown function DUF81; KEGG: dac:Daci_2500 hypothetical protein
YP_004489497.1	KEGG: dac:Daci_2499 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004489498.1	TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; Alpha-ketoglutarate dehydrogenase; KEGG: dac:Daci_2498 2-oxoacid dehydrogenase subunit E1; PFAM: Transketolase-like, pyrimidine-binding domain
YP_004489499.1	KEGG: dac:Daci_2497 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004489500.1	KEGG: dac:Daci_2496 hypothetical protein
YP_004489501.1	PFAM: Phospholipase/carboxylesterase; KEGG: dac:Daci_2495 phospholipase/carboxylesterase
YP_004489502.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: dac:Daci_2494 extradiol ring-cleavage dioxygenase class III protein subunit B
YP_004489503.1	PFAM: Class I peptide chain release factor; KEGG: dac:Daci_2493 class I peptide chain release factor
YP_004489504.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_2492 alpha/beta hydrolase fold protein
YP_004489505.1	PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: dac:Daci_2491 3-dehydroquinate dehydratase
YP_004489506.1	KEGG: dac:Daci_2490 hypothetical protein
YP_004489507.1	PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: dac:Daci_2489 glutaminyl-tRNA synthetase
YP_004489508.1	PFAM: Methyltransferase type 12; KEGG: dac:Daci_2488 type 12 methyltransferase
YP_004489509.1	PFAM: Uncharacterised conserved protein UCP019302; KEGG: dac:Daci_2487 hypothetical protein
YP_004489510.1	KEGG: dac:Daci_2486 hypothetical protein
YP_004489511.1	PFAM: Peptidase M23; KEGG: dac:Daci_2485 peptidase M23B
YP_004489512.1	PFAM: Protein of unknown function DUF2242; KEGG: dac:Daci_2484 putative lipoprotein
YP_004489513.1	PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: dac:Daci_2483 hypothetical protein
YP_004489514.1	KEGG: dac:Daci_2482 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase
YP_004489515.1	KEGG: dac:Daci_2481 hypothetical protein
YP_004489516.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2480 major facilitator transporter
YP_004489517.1	TIGRFAM: Diaminopimelate dehydrogenase; KEGG: dac:Daci_2479 diaminopimelate dehydrogenase; PFAM: Aspartate/homoserine dehydrogenase, NAD-binding
YP_004489518.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dac:Daci_2478 pseudouridine synthase
YP_004489519.1	PFAM: Phosphoesterase, DHHA1; KEGG: dac:Daci_2477 phosphoesterase DHHA1
YP_004489520.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dac:Daci_2476 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004489521.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dac:Daci_2475 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS
YP_004489522.1	KEGG: dac:Daci_2474 GTP-binding protein HSR1-related; TIGRFAM: GTP-binding protein, ribosome biogenesis, YlqF; PFAM: GTP-binding protein, HSR1-related
YP_004489523.1	KEGG: dac:Daci_2473 hypothetical protein
YP_004489524.1	KEGG: dac:Daci_2472 hypothetical protein
YP_004489525.1	PFAM: Glutamate--cysteine ligase; TIGRFAM: Glutamate--cysteine ligase, monofunctional; HAMAP: Glutamate--cysteine ligase; KEGG: dac:Daci_2471 glutamate--cysteine ligase
YP_004489526.1	KEGG: dac:Daci_2470 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004489528.1	PFAM: Ferredoxin; KEGG: dac:Daci_2469 ferredoxin
YP_004489529.1	TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: dac:Daci_2468 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB; GTP cyclohydrolase II
YP_004489530.1	KEGG: dac:Daci_2467 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004489531.1	TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: dac:Daci_2466 NusB antitermination factor; PFAM: NusB/RsmB/TIM44
YP_004489532.1	KEGG: dac:Daci_2465 aminotransferase; PFAM: Aminotransferase, class I/II
YP_004489533.1	KEGG: dac:Daci_2464 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily
YP_004489534.1	KEGG: dac:Daci_2463 protein TolQ; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel
YP_004489535.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dac:Daci_2462 biopolymer transport protein ExbD/TolR
YP_004489536.1	KEGG: dac:Daci_2461 protein TolA; TIGRFAM: Tol-Pal system, TolA; TonB, C-terminal; PFAM: Tol-Pal system, TolA
YP_004489537.1	KEGG: dac:Daci_2460 release factor H-coupled RctB family protein; TIGRFAM: Release factor H-coupled RctB family protein; PFAM: Uncharacterised protein family UPF0027
YP_004489538.1	KEGG: dac:Daci_2459 peptide chain release factor H; TIGRFAM: Putative peptide chain release factor H; PFAM: Class I peptide chain release factor
YP_004489539.1	PFAM: Protein of unknown function DUF81; KEGG: dac:Daci_2458 hypothetical protein
YP_004489540.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2457 LysR family transcriptional regulator
YP_004489541.1	PFAM: Peptidase U32; KEGG: dac:Daci_2456 peptidase U32
YP_004489542.1	KEGG: dac:Daci_2455 hypothetical protein
YP_004489543.1	PFAM: Aminotransferase, class I/II; HTH transcriptional regulator, GntR; KEGG: dac:Daci_2454 transcriptional regulator; SMART: HTH transcriptional regulator, GntR
YP_004489544.1	KEGG: dac:Daci_2453 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004489545.1	KEGG: dac:Daci_2451 hypothetical protein
YP_004489546.1	HAMAP: Dihydroxy-acid dehydratase; KEGG: dac:Daci_2450 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004489547.1	TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: dac:Daci_2449 cytochrome c oxidase accessory protein CcoG
YP_004489548.1	KEGG: dac:Daci_2448 hypothetical protein
YP_004489549.1	PFAM: Protein of unknown function DUF2157, membrane; KEGG: dac:Daci_2447 hypothetical protein
YP_004489550.1	KEGG: dac:Daci_2446 hypothetical protein
YP_004489551.1	KEGG: dac:Daci_2445 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004489552.1	KEGG: dac:Daci_2444 hypothetical protein
YP_004489553.1	KEGG: dac:Daci_2443 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region
YP_004489554.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2442 LysR family transcriptional regulator
YP_004489555.1	TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: dac:Daci_2441 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004489556.1	KEGG: hypothetical protein
YP_004489557.1	KEGG: dac:Daci_2440 hypothetical protein
YP_004489558.1	KEGG: dac:Daci_2439 hypothetical protein
YP_004489559.1	KEGG: dac:Daci_2438 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004489560.1	TIGRFAM: Aconitase B, bacterial; KEGG: dac:Daci_2433 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004489561.1	KEGG: dac:Daci_2432 hypothetical protein
YP_004489562.1	PFAM: HpcH/HpaI aldolase; KEGG: dac:Daci_2431 HpcH/HpaI aldolase
YP_004489563.1	HAMAP: Trans-aconitate 2-methyltransferase; KEGG: dac:Daci_2430 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11
YP_004489564.1	TIGRFAM: Malate dehydrogenase, NAD/NADP; HAMAP: Malate dehydrogenase; KEGG: dac:Daci_2429 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase
YP_004489565.1	KEGG: dac:Daci_2428 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR
YP_004489566.1	KEGG: dac:Daci_2427 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit
YP_004489567.1	TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; KEGG: dac:Daci_2426 succinate dehydrogenase, hydrophobic membrane anchor protein
YP_004489568.1	TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: dac:Daci_2425 succinate dehydrogenase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004489569.1	KEGG: dac:Daci_2424 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_004489570.1	PFAM: Protein of unknown function DUF339; KEGG: dac:Daci_2423 hypothetical protein
YP_004489571.1	KEGG: dac:Daci_2422 type II citrate synthase; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like
YP_004489572.1	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: vap:Vapar_2996 N-acetylmuramoyl-L-alanine amidase
YP_004489573.1	KEGG: vap:Vapar_2997 hypothetical protein
YP_004489574.1	KEGG: dac:Daci_2416 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004489575.1	KEGG: dac:Daci_2415 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004489576.1	KEGG: dac:Daci_2414 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004489577.1	TIGRFAM: S-formylglutathione hydrolase; KEGG: dac:Daci_2413 S-formylglutathione hydrolase; PFAM: Putative esterase
YP_004489578.1	PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: Phosphonoacetaldehyde hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAMAP: Phosphonoacetaldehyde hydrolase; KEGG: dac:Daci_2412 phosphonoacetaldehyde hydrolase
YP_004489579.1	TIGRFAM: Iron-containing alcohol dehydrogenase, phosphonate metabolism-associated; KEGG: dac:Daci_2411 phosphonate metabolism-associated iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004489580.1	KEGG: ctt:CtCNB1_3414 phosphonate ABC transporter, inner membrane; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004489581.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, phosphonate import, PhnC; KEGG: dac:Daci_2409 phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter-like
YP_004489582.1	TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: dac:Daci_2408 phosphonate ABC transporter periplasmic phosphonate-binding protein
YP_004489583.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2407 MarR family transcriptional regulator
YP_004489584.1	KEGG: dac:Daci_2406 hypothetical protein
YP_004489585.1	KEGG: dac:Daci_2405 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal
YP_004489586.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2404 LysR family transcriptional regulator
YP_004489587.1	KEGG: dac:Daci_2403 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004489588.1	PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; KEGG: dac:Daci_2402 GreA/GreB family elongation factor
YP_004489589.1	PFAM: Acyltransferase 3; KEGG: dac:Daci_2401 acyltransferase 3
YP_004489590.1	KEGG: dac:Daci_2400 ArsR family transcriptional regulator
YP_004489591.1	KEGG: dac:Daci_2399 cyd operon protein YbgT; TIGRFAM: Cyd operon protein YbgT; PFAM: Membrane bound YbgT-like
YP_004489592.1	KEGG: dac:Daci_2398 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_004489593.1	PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: dac:Daci_2397 cytochrome bd ubiquinol oxidase subunit I
YP_004489594.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; KEGG: dac:Daci_2396 cysteine ABC transporter permease/ATP-binding protein; PFAM: ABC transporter-like
YP_004489595.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; KEGG: dac:Daci_2395 cysteine ABC transporter permease/ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_004489596.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: dac:Daci_2394 2-nitropropane dioxygenase NPD
YP_004489597.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_2393 acyl-CoA dehydrogenase domain-containing protein
YP_004489598.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_2392 extracellular ligand-binding receptor
YP_004489599.1	PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: dac:Daci_2391 electron transfer flavoprotein subunit alpha
YP_004489600.1	KEGG: dac:Daci_2390 electron transfer flavoprotein subunit alpha/beta; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
YP_004489602.1	PFAM: Mechanosensitive ion channel MscS; KEGG: dac:Daci_2389 MscS mechanosensitive ion channel
YP_004489603.1	PFAM: Crotonase, core; KEGG: dac:Daci_2388 enoyl-CoA hydratase/isomerase
YP_004489604.1	PFAM: Histone deacetylase superfamily; KEGG: dac:Daci_2387 histone deacetylase superfamily protein
YP_004489605.1	KEGG: dac:Daci_2386 ATPase; PFAM: ATPase associated with various cellular activities, AAA-3; SMART: ATPase, AAA+ type, core
YP_004489606.1	PFAM: Protein of unknown function DUF58; KEGG: dac:Daci_2385 hypothetical protein
YP_004489607.1	KEGG: dac:Daci_2384 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like
YP_004489608.1	TIGRFAM: Lytic murein transglycosylase B; KEGG: dac:Daci_2383 lytic murein transglycosylase B
YP_004489609.1	KEGG: dac:Daci_2382 putative transporter signal peptide protein
YP_004489610.1	PFAM: Heat shock protein Hsp20; KEGG: dac:Daci_2381 heat shock protein HSP20
YP_004489611.1	TIGRFAM: Peptidase M22, glycoprotease, subgroup; KEGG: dac:Daci_2380 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: Peptidase M22, glycoprotease
YP_004489612.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: dac:Daci_2379 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004489613.1	PFAM: Nitrate/nitrite sensing protein NIT; ANTAR; KEGG: dac:Daci_2378 response regulator receiver/ANTAR domain-containing protein
YP_004489614.1	KEGG: dac:Daci_2377 twin-arginine translocation pathway signal protein
YP_004489615.1	KEGG: dac:Daci_2376 nitrate ABC transporter inner membrane subunit; TIGRFAM: Nitrate transport permease; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004489616.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Nitrate transport ATP-binding subunit C/D; KEGG: dac:Daci_2375 nitrate ABC transporter ATPase subunits C and D; PFAM: ABC transporter-like
YP_004489617.1	KEGG: dac:Daci_2374 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004489618.1	PFAM: Protein of unknown function DUF2302; KEGG: dac:Daci_2373 hypothetical protein
YP_004489619.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; HAMP linker domain; KEGG: dac:Daci_2372 PAS/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; PAS
YP_004489620.1	KEGG: dac:Daci_2371 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004489621.1	KEGG: dac:Daci_2370 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region
YP_004489622.1	PFAM: Glycosyl transferase, family 3, N-terminal; KEGG: dac:Daci_2369 glycosyl transferase family protein
YP_004489623.1	TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: dac:Daci_2368 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase
YP_004489624.1	manually curated; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Extracellular solute-binding protein, family 3; Signal transduction response regulator, receiver region; KEGG: dac:Daci_2366 histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Extracellular solute-binding protein, family 3; Signal transduction response regulator, receiver region
YP_004489625.1	KEGG: dac:Daci_2365 thioesterase superfamily protein; manually curated; PFAM: Thioesterase superfamily
YP_004489626.1	KEGG: dac:Daci_2364 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein
YP_004489627.1	KEGG: dac:Daci_2363 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; PFAM: Ribosomal protein S21
YP_004489628.1	KEGG: dac:Daci_2362 GatB/YqeY domain-containing protein
YP_004489629.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2361 LysR family transcriptional regulator
YP_004489630.1	TIGRFAM: Tartrate dehydrogenase; KEGG: dac:Daci_2360 tartrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004489631.1	KEGG: dac:Daci_2359 hypothetical protein
YP_004489632.1	KEGG: dac:Daci_2358 hypothetical protein
YP_004489633.1	PFAM: Alkaline phosphatase D-related; KEGG: dac:Daci_2357 putative phosphatase or phosphodiesterase
YP_004489634.1	TIGRFAM: Glutathione reductase, animal/bacterial; KEGG: dac:Daci_2356 glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004489635.1	PFAM: Major facilitator superfamily MFS-1; KEGG: bcj:BCAM1138 major facilitator superfamily protein
YP_004489636.1	PFAM: Porin, Gram-negative type; KEGG: rsl:RPSI07_1311 putative outer membrane porin
YP_004489637.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: vei:Veis_0851 TetR family transcriptional regulator
YP_004489638.1	KEGG: rpb:RPB_0127 Rieske (2Fe-2S) protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004489639.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: dac:Daci_2354 hypothetical protein
YP_004489640.1	KEGG: dac:Daci_2353 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004489641.1	PFAM: Ferredoxin; KEGG: dac:Daci_2352 ferredoxin
YP_004489642.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2349 LysR family transcriptional regulator
YP_004489643.1	KEGG: dac:Daci_2348 hypothetical protein
YP_004489644.1	KEGG: dac:Daci_2347 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain
YP_004489645.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004489646.1	TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: dac:Daci_2345 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase
YP_004489647.1	KEGG: dac:Daci_2343 hypothetical protein
YP_004489648.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_2342 putative iron-regulated membrane protein
YP_004489649.1	KEGG: dac:Daci_2341 putative iron uptake protein
YP_004489650.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_2340 hypothetical protein
YP_004489651.1	PFAM: Protein of unknown function DUF1641; KEGG: dac:Daci_2339 hypothetical protein
YP_004489652.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dac:Daci_2338 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004489653.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_2337 TetR family transcriptional regulator
YP_004489654.1	KEGG: dac:Daci_2334 PhzF family phenazine biosynthesis protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_004489656.1	PFAM: Protein of unknown function DUF159; KEGG: dac:Daci_2333 hypothetical protein
YP_004489657.1	KEGG: dac:Daci_2332 beta-lactamase; PFAM: Penicillin-binding protein, transpeptidase
YP_004489658.1	KEGG: dac:Daci_2331 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter
YP_004489659.1	KEGG: dac:Daci_2330 hypothetical protein
YP_004489660.1	PFAM: Sporulation stage V, protein R; KEGG: dac:Daci_2329 SpoVR family protein
YP_004489661.1	KEGG: dac:Daci_2328 hypothetical protein; HAMAP: UPF0229 protein yeaH; PFAM: Protein of unknown function DUF444
YP_004489662.1	KEGG: dac:Daci_2327 putative serine protein kinase PrkA; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA
YP_004489663.1	PFAM: Mechanosensitive ion channel MscS; KEGG: dac:Daci_2326 MscS mechanosensitive ion channel
YP_004489664.1	manually curated; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; KEGG: dac:Daci_2325 methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004489665.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: dac:Daci_2323 peptidase U62 modulator of DNA gyrase
YP_004489666.1	PFAM: Uncharacterised protein family UPF0307; KEGG: dac:Daci_2322 hypothetical protein
YP_004489667.1	KEGG: dac:Daci_2321 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding
YP_004489668.1	KEGG: dac:Daci_2318 putative substrate-binding periplasmic (pbp) ABC transporter protein
YP_004489669.1	KEGG: dac:Daci_2317 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004489670.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: dac:Daci_2316 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489671.1	KEGG: dac:Daci_2315 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004489672.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_2314 porin
YP_004489673.1	KEGG: dac:Daci_2313 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC
YP_004489674.1	PFAM: Nitroreductase-like; KEGG: dac:Daci_2312 nitroreductase
YP_004489675.1	KEGG: pop:POPTR_946830 hypothetical protein; TIGRFAM: Serine O-acetyltransferase
YP_004489676.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: dac:Daci_2310 tRNA/rRNA methyltransferase SpoU
YP_004489677.1	KEGG: dac:Daci_2309 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase
YP_004489678.1	KEGG: dac:Daci_2307 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004489679.1	SMART: HTH transcriptional regulator, ArsR; KEGG: dac:Daci_2306 ArsR family transcriptional regulator
YP_004489680.1	KEGG: rcu:RCOM_1917400 hypothetical protein
YP_004489681.1	KEGG: gur:Gura_1482 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal
YP_004489682.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: dze:Dd1591_4252 restriction modification system DNA specificity domain protein
YP_004489683.1	PFAM: DNA methylase, adenine-specific; KEGG: caa:Caka_1179 N-6 DNA methylase
YP_004489684.1	PFAM: Fatty acid hydroxylase; KEGG: dac:Daci_2296 fatty acid hydroxylase
YP_004489685.1	KEGG: dac:Daci_2295 LysR family transcriptional regulator; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004489686.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_2294 short-chain dehydrogenase/reductase SDR
YP_004489687.1	KEGG: dac:Daci_2293 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004489689.1	KEGG: dac:Daci_2292 hypothetical protein
YP_004489690.1	KEGG: dac:Daci_2291 hypothetical protein
YP_004489691.1	PFAM: Protein of unknown function DUF1006; KEGG: dac:Daci_2290 hypothetical protein
YP_004489692.1	KEGG: axy:AXYL_02946 Fe(3+)-pyochelin receptor 1; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004489693.1	PFAM: FecR protein; KEGG: mms:mma_2023 Fe2+-dicitrate sensor, membrane component
YP_004489694.1	KEGG: dac:Daci_3271 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004489695.1	KEGG: dac:Daci_2286 hypothetical protein
YP_004489696.1	KEGG: dac:Daci_2285 acetoacetyl-CoA reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004489697.1	KEGG: dac:Daci_2284 acetolactate synthase catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004489698.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: dac:Daci_2283 SMP-30/gluconolaconase/LRE domain-containing protein
YP_004489699.1	KEGG: dac:Daci_2281 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004489700.1	KEGG: phage portal protein, pbsx family; TIGRFAM: Phage portal protein, PBSX; PFAM: Phage portal protein
YP_004489701.1	KEGG: hypothetical protein
YP_004489702.1	PFAM: Phage capsid scaffolding; KEGG: capsid scaffolding
YP_004489703.1	KEGG: phage major capsid protein, p2 family; TIGRFAM: Phage major capsid protein, P2; PFAM: Phage major capsid protein, P2
YP_004489704.1	PFAM: Phage small terminase subunit; KEGG: small terminase subunit
YP_004489705.1	PFAM: Phage head completion; KEGG: head completion protein
YP_004489706.1	PFAM: Phage tail protein X; KEGG: lhk:LHK_02587 Fels-2 prophage protein
YP_004489707.1	KEGG: bmj:BMULJ_04617 bacteriophage type II holin
YP_004489708.1	PFAM: Glycoside hydrolase, family 24; KEGG: bav:BAV1338 phage lysozyme
YP_004489709.1	PFAM: Protein of unknown function DUF2514; KEGG: dac:Daci_2639 hypothetical protein
YP_004489710.1	PFAM: P2 phage tail completion R; KEGG: p2 phage tail completion r family protein
YP_004489711.1	KEGG: phage virion morphogenesis protein; TIGRFAM: Phage virion morphogenesis (putative tail completion) protein; PFAM: Phage virion morphogenesis (putative tail completion) protein
YP_004489712.1	KEGG: dac:Daci_2637 phage baseplate assembly protein V; TIGRFAM: Phage-related baseplate assembly protein V; PFAM: Phage baseplate assembly protein V
YP_004489713.1	PFAM: GPW/gp25; KEGG: dac:Daci_2636 gpW/GP25 family protein
YP_004489714.1	PFAM: Baseplate assembly protein J-like, predicted; KEGG: dac:Daci_2635 baseplate J family protein
YP_004489715.1	KEGG: dac:Daci_2634 hypothetical protein
YP_004489716.1	KEGG: dac:Daci_2633 hypothetical protein
YP_004489717.1	KEGG: dac:Daci_2632 virulence-associated protein
YP_004489718.1	KEGG: dac:Daci_2632 virulence-associated protein
YP_004489720.1	KEGG: mtb:TBMG_04077 PE-PGRS family protein
YP_004489721.1	KEGG: hypothetical protein
YP_004489722.1	KEGG: dac:Daci_2626 tail sheath protein
YP_004489723.1	KEGG: dac:Daci_2625 phage major tail tube protein; TIGRFAM: Phage major tail tube protein; PFAM: Phage major tail tube protein
YP_004489724.1	PFAM: Phage tail E; KEGG: dac:Daci_2624 tail E family protein
YP_004489725.1	PFAM: Phage P2 GpE; KEGG: sbn:Sbal195_2892 P2 GpE family protein
YP_004489726.1	KEGG: hse:Hsero_0886 bacteriophage-related tail transmembrane protein
YP_004489727.1	PFAM: Phage P2 GpU; KEGG: p2 gpu family protein
YP_004489728.1	PFAM: Phage late control D; KEGG: late control d family protein
YP_004489729.1	KEGG: mpt:Mpe_A1937 hypothetical protein
YP_004489730.1	KEGG: mpt:Mpe_A1938 hypothetical protein
YP_004489731.1	manually curated
YP_004489732.1	KEGG: kpu:KP1_0581 hypothetical protein
YP_004489733.1	KEGG: peptidase S24/s26a/s26b, conserved region protein; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004489736.1	KEGG: bmj:BMULJ_03648 putative bacteriophage DNA-binding protein
YP_004489737.1	PFAM: Phage transcriptional activator, Ogr/Delta; KEGG: transcriptional activator ogr/delta
YP_004489739.1	KEGG: hypothetical protein
YP_004489740.1	PFAM: Replication endonuclease, probable, phage; KEGG: replication protein A
YP_004489741.1	KEGG: hypothetical protein
YP_004489742.1	KEGG: dac:Daci_2614 hypothetical protein
YP_004489744.1	PFAM: Prophage CP4-57 regulatory; KEGG: dac:Daci_3544 phage transcriptional regulator AlpA
YP_004489745.1	PFAM: Integrase, catalytic core, phage; KEGG: azo:azo2051 phage integrase family site specific recombinase
YP_004489746.1	KEGG: dac:Daci_2274 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; manually curated; TIGRFAM: DNA mismatch repair protein MutS, type 1; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; HAMAP: DNA mismatch repair protein MutS, type 1
YP_004489747.1	KEGG: dac:Daci_2273 proteasome-type protease-like protein
YP_004489748.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_2272 alpha/beta hydrolase fold protein
YP_004489749.1	TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: dac:Daci_2269 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA
YP_004489750.1	PFAM: PsiF; KEGG: dac:Daci_2268 PsiF repeat-containing protein
YP_004489751.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_2267 PepSY-associated TM helix domain-containing protein
YP_004489752.1	KEGG: dac:Daci_2266 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004489753.1	PFAM: Protein of unknown function DUF2306, membrane; KEGG: dac:Daci_2265 membrane protein-like protein
YP_004489754.1	KEGG: dac:Daci_2264 hypothetical protein
YP_004489755.1	PFAM: Signal transduction histidine kinase, internal region; ATP-binding region, ATPase-like; KEGG: dac:Daci_2263 signal transduction histidine kinase LytS
YP_004489756.1	KEGG: pop:POPTR_795098 hypothetical protein; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004489757.1	manually curated; PFAM: ABC transporter-like; KEGG: dac:Daci_2261 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489758.1	KEGG: dac:Daci_2260 hypothetical protein
YP_004489759.1	KEGG: dac:Daci_2259 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004489760.1	PFAM: Acriflavin resistance protein; KEGG: dac:Daci_2258 acriflavin resistance protein
YP_004489761.1	PFAM: Acriflavin resistance protein; KEGG: dac:Daci_2257 acriflavin resistance protein
YP_004489762.1	KEGG: dac:Daci_2256 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004489763.1	KEGG: dac:Daci_2255 dehydrogenase
YP_004489764.1	PFAM: Branched-chain amino acid transport; KEGG: csa:Csal_0391 branched-chain amino acid transport
YP_004489765.1	KEGG: csa:Csal_0390 AzlC-like protein; manually curated; PFAM: AzlC-like
YP_004489766.1	KEGG: bmc:BAbS19_I17400 transcriptional regulator, Cro/CI family; PFAM: Helix-turn-helix type 3; Methyltransferase type 12; SMART: Helix-turn-helix type 3
YP_004489767.1	PFAM: XdhC- CoxI; KEGG: dac:Daci_2254 hypothetical protein
YP_004489768.1	PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: dac:Daci_2253 carbon monoxide dehydrogenase subunit G
YP_004489769.1	PFAM: vWA containing CoxE-like; KEGG: dac:Daci_2252 VWA containing CoxE family protein
YP_004489770.1	KEGG: dac:Daci_2251 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core
YP_004489771.1	KEGG: dac:Daci_2250 carbon-monoxide dehydrogenase; PFAM: Molybdopterin dehydrogenase, FAD-binding
YP_004489772.1	KEGG: dac:Daci_2249 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004489773.1	KEGG: dac:Daci_2248 2Fe-2S iron-sulfur cluster-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin
YP_004489774.1	PFAM: Helix-turn-helix, Fis-type; GAF; KEGG: dac:Daci_2247 fis family transcriptional regulator
YP_004489775.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: aav:Aave_2019 tripartite ATP-independent periplasmic transporter DctQ
YP_004489776.1	KEGG: aav:Aave_2018 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004489777.1	KEGG: aav:Aave_2017 hypothetical protein
YP_004489778.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: aav:Aave_2016 TRAP dicarboxylate transporter-DctP subunit
YP_004489779.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: dac:Daci_2243 TRAP dicarboxylate transporter subunit DctP
YP_004489780.1	PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: dac:Daci_2242 1-deoxy-D-xylulose-5-phosphate synthase
YP_004489781.1	KEGG: dac:Daci_2241 polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004489782.1	KEGG: dac:Daci_2240 exonuclease VII small subunit; HAMAP: Exonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit
YP_004489783.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dac:Daci_2239 Rieske (2Fe-2S) domain-containing protein
YP_004489784.1	PFAM: Small multidrug resistance protein; KEGG: dac:Daci_2238 putative transmembrane protein
YP_004489785.1	PFAM: Rhodanese-like; KEGG: dac:Daci_2237 rhodanese domain-containing protein; SMART: Rhodanese-like
YP_004489786.1	PFAM: Flagellar transcriptional activator; KEGG: dac:Daci_2236 flagellar transcriptional activator
YP_004489787.1	PFAM: Flagellar transcriptional activator FlhC; KEGG: dac:Daci_2235 transcriptional activator FlhC
YP_004489788.1	KEGG: dac:Daci_2234 EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; Phosphotransferase system, EIIC; SMART: Diguanylate phosphodiesterase, predicted
YP_004489789.1	HAMAP: Phosphoenolpyruvate carboxylase; KEGG: dac:Daci_2233 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase
YP_004489790.1	PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: dac:Daci_2232 porphobilinogen deaminase
YP_004489791.1	PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: dac:Daci_2231 uroporphyrinogen III synthase HEM4
YP_004489792.1	PFAM: HemX; KEGG: dac:Daci_2230 hypothetical protein
YP_004489793.1	PFAM: HemY, N-terminal; KEGG: dac:Daci_2229 HemY domain-containing protein
YP_004489794.1	KEGG: dac:Daci_2228 cytochrome b561
YP_004489795.1	PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: dac:Daci_2227 YceI family protein
YP_004489796.1	KEGG: dac:Daci_2226 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like
YP_004489797.1	TIGRFAM: Protein of unknown function DUF11; KEGG: dac:Daci_2225 hypothetical protein
YP_004489798.1	KEGG: dac:Daci_2224 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004489799.1	PFAM: Negative transcriptional regulator; KEGG: dac:Daci_2223 FMN-binding negative transcriptional regulator
YP_004489800.1	KEGG: dac:Daci_2222 hypothetical protein
YP_004489801.1	KEGG: dac:Daci_2221 hypothetical protein
YP_004489802.1	KEGG: dac:Daci_2220 hypothetical protein
YP_004489803.1	PFAM: Protein of unknown function DUF1272; KEGG: dac:Daci_2219 hypothetical protein
YP_004489804.1	KEGG: dac:Daci_2218 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004489805.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_2217 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004489806.1	TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: dac:Daci_2216 valyl-tRNA synthetase
YP_004489807.1	TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: dac:Daci_2215 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_004489808.1	PFAM: SirA-like; KEGG: dac:Daci_2214 SirA family protein
YP_004489809.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_2213 NUDIX hydrolase
YP_004489810.1	TIGRFAM: Cysteine synthase K/M; Cysteine synthase B; KEGG: dac:Daci_2212 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004489811.1	KEGG: dac:Daci_2211 hypothetical protein
YP_004489812.1	PFAM: LrgA; KEGG: dac:Daci_2210 LrgA family protein
YP_004489813.1	PFAM: LrgB-like protein; KEGG: dac:Daci_2209 LrgB family protein
YP_004489814.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2208 LysR family transcriptional regulator
YP_004489815.1	KEGG: dac:Daci_2207 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA oxidase/dehydrogenase, type 1
YP_004489816.1	KEGG: dac:Daci_2206 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004489817.1	KEGG: dac:Daci_2205 hypothetical protein
YP_004489818.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2204 LysR family transcriptional regulator
YP_004489819.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: dac:Daci_2203 CMP/dCMP deaminase zinc-binding
YP_004489820.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2202 major facilitator transporter
YP_004489821.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2201 sugar efflux transporter
YP_004489822.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_2200 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004489823.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: dac:Daci_2199 NAD-dependent epimerase/dehydratase
YP_004489824.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2198 LysR family transcriptional regulator
YP_004489825.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_2197 extracellular ligand-binding receptor
YP_004489826.1	KEGG: dac:Daci_2196 67-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004489827.1	KEGG: dac:Daci_2195 hypothetical protein
YP_004489828.1	KEGG: dac:Daci_2194 hypothetical protein
YP_004489829.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: dac:Daci_2193 NAD-dependent epimerase/dehydratase
YP_004489830.1	KEGG: dac:Daci_2192 CDP-6-deoxy-delta-3,4-glucoseen reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin
YP_004489831.1	KEGG: dac:Daci_2191 hypothetical protein
YP_004489832.1	TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: dac:Daci_2189 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_004489833.1	TIGRFAM: Poly(A) polymerase, PcnB; KEGG: dac:Daci_2188 poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_004489834.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: dac:Daci_2187 HAD family hydrolase
YP_004489835.1	TIGRFAM: Chromosomal replication control, regulator Hda; KEGG: dac:Daci_2186 DnaA regulatory inactivator Hda
YP_004489836.1	TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: dac:Daci_2185 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein
YP_004489837.1	KEGG: dac:Daci_2184 hypothetical protein
YP_004489838.1	KEGG: dac:Daci_2183 hypothetical protein
YP_004489839.1	KEGG: dac:Daci_2182 integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN
YP_004489840.1	KEGG: dac:Daci_2181 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; PFAM: Ribosomal protein S20
YP_004489841.1	KEGG: dac:Daci_2180 hypothetical protein
YP_004489842.1	PFAM: Aminotransferase class-III; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: dac:Daci_2179 acetylornithine aminotransferase
YP_004489843.1	TIGRFAM: Ornithine carbamoyltransferase; KEGG: dac:Daci_2178 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region
YP_004489844.1	KEGG: dac:Daci_2177 hypothetical protein
YP_004489845.1	KEGG: dac:Daci_2176 ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal
YP_004489846.1	KEGG: dac:Daci_2175 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit
YP_004489847.1	PFAM: Uncharacterised protein family UPF0153; KEGG: dac:Daci_2174 hypothetical protein
YP_004489848.1	KEGG: dac:Daci_2173 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004489849.1	PFAM: Amino acid permease-associated region; KEGG: dac:Daci_2172 amino acid permease-associated protein
YP_004489850.1	KEGG: dac:Daci_2171 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/II
YP_004489851.1	KEGG: dac:Daci_2170 tryptophan 2,3-dioxygenase; TIGRFAM: Tryptophan 2,3-dioxygenase, bacteria; PFAM: Tryptophan 2,3-dioxygenase
YP_004489852.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_2169 endoribonuclease L-PSP
YP_004489853.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_2168 lysine exporter protein LysE/YggA
YP_004489854.1	KEGG: dac:Daci_2167 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004489855.1	PFAM: Amino acid permease-associated region; KEGG: dac:Daci_2166 amino acid permease-associated protein
YP_004489856.1	TIGRFAM: Arylformamidase; KEGG: dac:Daci_2165 arylformamidase; PFAM: Putative cyclase
YP_004489857.1	TIGRFAM: Kynureninase; KEGG: dac:Daci_2164 kynureninase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004489858.1	KEGG: dac:Daci_2163 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain
YP_004489859.1	SMART: Helix-turn-helix, AraC domain; manually curated; KEGG: dac:Daci_2162 AraC family transcriptional regulator; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Helix-turn-helix, AraC type; Methylguanine DNA methyltransferase, ribonuclease-like
YP_004489860.1	KEGG: dac:Daci_2161 tryptophan 2,3-dioxygenase; TIGRFAM: Tryptophan 2,3-dioxygenase, bacteria; PFAM: Tryptophan 2,3-dioxygenase
YP_004489861.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2160 major facilitator transporter
YP_004489862.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_2159 monooxygenase FAD-binding
YP_004489863.1	PFAM: Histone-like nucleoid-structuring protein H-NS; KEGG: dac:Daci_2158 histone family protein nucleoid-structuring protein H-NS
YP_004489864.1	PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: dac:Daci_2157 hypothetical protein
YP_004489865.1	PFAM: Metallophosphoesterase; TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: dac:Daci_2156 diadenosine tetraphosphatase; HAMAP: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical
YP_004489866.1	KEGG: dac:Daci_2155 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004489867.1	PFAM: Protein of unknown function, zinc metallopeptidase putative; KEGG: dac:Daci_2154 hypothetical protein
YP_004489868.1	KEGG: dac:Daci_2153 hypothetical protein
YP_004489869.1	PFAM: Ornithine cyclodeaminase/mu-crystallin; KEGG: dac:Daci_2152 ornithine cyclodeaminase
YP_004489870.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: dac:Daci_2151 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004489871.1	TIGRFAM: Quinolinate synthetase A; KEGG: dac:Daci_2150 quinolinate synthetase; PFAM: Quinolinate synthetase A
YP_004489872.1	TIGRFAM: L-aspartate oxidase; KEGG: dac:Daci_2149 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal
YP_004489873.1	TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: dac:Daci_2148 deoxycytidine triphosphate deaminase
YP_004489874.1	TIGRFAM: Guanine deaminase; KEGG: dac:Daci_2147 guanine deaminase; PFAM: Amidohydrolase 1
YP_004489875.1	PFAM: Basic membrane lipoprotein; KEGG: dac:Daci_2146 basic membrane lipoprotein
YP_004489876.1	PFAM: Histidine triad (HIT) protein; KEGG: dac:Daci_2145 histidine triad (HIT) protein
YP_004489877.1	PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: dac:Daci_2144 adenosine deaminase
YP_004489878.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dac:Daci_2143 Rieske (2Fe-2S) domain-containing protein
YP_004489879.1	PFAM: Basic membrane lipoprotein; KEGG: dac:Daci_2142 basic membrane lipoprotein
YP_004489880.1	PFAM: Basic membrane lipoprotein; KEGG: dac:Daci_2138 basic membrane lipoprotein
YP_004489881.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_2137 inner-membrane translocator
YP_004489882.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_2136 inner-membrane translocator
YP_004489883.1	PFAM: ABC transporter-like; KEGG: dac:Daci_2135 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489884.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2134 LysR family transcriptional regulator
YP_004489885.1	KEGG: dac:Daci_2133 hypothetical protein
YP_004489886.1	KEGG: dac:Daci_2132 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_004489887.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_2131 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004489888.1	KEGG: dac:Daci_2130 CRP/FNR family transcriptional regulator; PFAM: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; SMART: HTH transcriptional regulator, Crp
YP_004489889.1	KEGG: dac:Daci_2129 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004489890.1	PFAM: Protein of unknown function DUF989; KEGG: dac:Daci_2128 hypothetical protein
YP_004489891.1	KEGG: dac:Daci_2127 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: Xanthine dehydrogenase accessory protein XdhC; PFAM: XdhC- CoxI
YP_004489892.1	KEGG: dac:Daci_2126 hypothetical protein
YP_004489893.1	KEGG: dac:Daci_2125 hypothetical protein
YP_004489894.1	KEGG: dac:Daci_2124 Arc domain-containing protein
YP_004489895.1	KEGG: dac:Daci_2123 putative lipoprotein
YP_004489896.1	PFAM: DoxX; KEGG: dac:Daci_2122 DoxX family protein
YP_004489897.1	TIGRFAM: Hydroxyisourate hydrolase; KEGG: dac:Daci_2121 hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase
YP_004489898.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: dac:Daci_2120 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004489899.1	TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: dac:Daci_2119 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004489900.1	TIGRFAM: Hydroxypyruvate isomerase; KEGG: dac:Daci_2118 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain
YP_004489901.1	TIGRFAM: Glyoxylate carboligase; KEGG: dac:Daci_2117 glyoxylate carboligase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central region
YP_004489902.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2116 LysR family transcriptional regulator
YP_004489903.1	KEGG: dac:Daci_2115 hydroxypyruvate reductase; PFAM: MOFRL
YP_004489904.1	KEGG: dac:Daci_2114 hypothetical protein
YP_004489905.1	TIGRFAM: Tartrate dehydrogenase; KEGG: dac:Daci_2113 tartrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004489906.1	KEGG: dac:Daci_2112 LysR family transcriptional regulator; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004489907.1	KEGG: dac:Daci_2111 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004489908.1	TIGRFAM: Putative urate catabolism protein; KEGG: dac:Daci_2110 urate catabolism protein; PFAM: Polysaccharide deacetylase
YP_004489909.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1; KEGG: dac:Daci_2109 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Peptidase M20; Peptidase M20, dimerisation
YP_004489910.1	PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: dac:Daci_2108 peptidase dimerisation domain-containing protein
YP_004489911.1	KEGG: dac:Daci_2107 xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004489912.1	PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; KEGG: dac:Daci_2106 malic enzyme
YP_004489913.1	KEGG: abm:ABSDF1778 hypothetical protein
YP_004489916.1	KEGG: tcx:Tcr_0663 NAD-dependent DNA ligase
YP_004489917.1	KEGG: dac:Daci_0717 hypothetical protein
YP_004489918.1	KEGG: bcm:Bcenmc03_0187 hypothetical protein; manually curated; PFAM: Mu-like prophage protein Com
YP_004489920.1	KEGG: dac:Daci_2095 glycosyltransferase
YP_004489921.1	KEGG: dac:Daci_2094 hypothetical protein
YP_004489924.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rcu:RCOM_2056130 hypothetical protein
YP_004489925.1	PFAM: Major facilitator superfamily MFS-1; KEGG: hse:Hsero_0278 major facilitator superfamily permease
YP_004489926.1	PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: ctt:CtCNB1_2453 hypothetical ABC transporter ATP-binding protein Rv1348/MT1390
YP_004489927.1	PFAM: Amidase; KEGG: dac:Daci_2093 hypothetical protein
YP_004489928.1	PFAM: Polysaccharide deacetylase; KEGG: dac:Daci_2092 polysaccharide deacetylase
YP_004489929.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2091 major facilitator transporter
YP_004489930.1	KEGG: dac:Daci_2090 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004489931.1	KEGG: dac:Daci_2089 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004489932.1	KEGG: hypothetical protein
YP_004489933.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: dac:Daci_2088 cobalamin synthesis protein P47K
YP_004489934.1	KEGG: dac:Daci_2087 hypothetical protein
YP_004489935.1	KEGG: dac:Daci_2086 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004489936.1	KEGG: dac:Daci_2085 hypothetical protein
YP_004489937.1	PFAM: YkuD domain; KEGG: dac:Daci_2084 ErfK/YbiS/YcfS/YnhG
YP_004489938.1	KEGG: dac:Daci_2083 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat
YP_004489939.1	PFAM: Protein of unknown function DUF81; Hep/Hag; KEGG: dac:Daci_2082 hypothetical protein
YP_004489940.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dac:Daci_2081 OmpA/MotB domain-containing protein
YP_004489941.1	PFAM: Mur ligase, central; KEGG: dac:Daci_2080 Mur ligase middle domain-containing protein
YP_004489942.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: dac:Daci_2079 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004489943.1	KEGG: dac:Daci_2078 HlyD family type I secretion membrane fusion protein; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD
YP_004489944.1	PFAM: Outer membrane efflux protein; KEGG: dac:Daci_2077 outer membrane efflux protein
YP_004489945.1	PFAM: Flp/Fap pilin component; KEGG: dac:Daci_2076 Flp/Fap pilin component
YP_004489946.1	PFAM: Flp/Fap pilin component; KEGG: dac:Daci_2075 Flp/Fap pilin component
YP_004489947.1	PFAM: Peptidase A24A, prepilin type IV; KEGG: dac:Daci_2074 peptidase A24A prepilin type IV
YP_004489948.1	KEGG: dac:Daci_2073 Flp pilus assembly protein CpaB; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain
YP_004489949.1	PFAM: Type II/III secretion system; KEGG: dac:Daci_2072 type II and III secretion system protein
YP_004489950.1	KEGG: dac:Daci_2071 Flp pilus assembly protein ATPase CpaE-like protein
YP_004489951.1	PFAM: Type II secretion system protein E; KEGG: dac:Daci_2070 type II secretion system protein E
YP_004489952.1	PFAM: Type II secretion system F domain; KEGG: dac:Daci_2069 type II secretion system protein
YP_004489953.1	PFAM: Type II secretion system F domain; KEGG: dac:Daci_2068 type II secretion system protein
YP_004489954.1	KEGG: dac:Daci_2067 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; SMART: Tetratricopeptide repeat
YP_004489955.1	KEGG: dac:Daci_2066 hypothetical protein
YP_004489956.1	PFAM: TadE-like; KEGG: dac:Daci_2065 TadE family protein
YP_004489957.1	PFAM: TadE-like; KEGG: dac:Daci_2064 TadE family protein
YP_004489958.1	PFAM: Protein of unknown function DUF2134, membrane; KEGG: dac:Daci_2063 membrane protein-like protein
YP_004489959.1	KEGG: dac:Daci_2062 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004489960.1	PFAM: Glycosyl transferase, group 1; KEGG: dac:Daci_2061 glycosyl transferase group 1 protein
YP_004489961.1	KEGG: dac:Daci_2060 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_004489962.1	manually curated; KEGG: dac:Daci_2059 hypothetical protein
YP_004489963.1	KEGG: dac:Daci_2058 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004489964.1	KEGG: dac:Daci_2057 fis family two component sigma-54-specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004489965.1	KEGG: dac:Daci_2056 hypothetical protein
YP_004489966.1	PFAM: Protein of unknown function DUF486; KEGG: dac:Daci_2055 hypothetical protein
YP_004489967.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2054 major facilitator transporter
YP_004489968.1	KEGG: dac:Daci_2053 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A
YP_004489969.1	HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: dac:Daci_2052 ATP-dependent Clp protease proteolytic subunit; PFAM: Peptidase S14, ClpP
YP_004489970.1	PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: dac:Daci_2051 hypothetical protein
YP_004489971.1	KEGG: dac:Daci_2050 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004489972.1	KEGG: dac:Daci_2049 hypothetical protein
YP_004489973.1	manually curated; PFAM: Helix-turn-helix type 3; KEGG: bph:Bphy_6926 XRE family transcriptional regulator; SMART: Helix-turn-helix type 3
YP_004489974.1	KEGG: pph:Ppha_2339 protein of unknown function DUF323
YP_004489975.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2045 LysR family transcriptional regulator
YP_004489976.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_2044 short-chain dehydrogenase/reductase SDR
YP_004489977.1	KEGG: axy:AXYL_05464 luciferase-like monooxygenase family protein 2; TIGRFAM: Luciferase-type oxidoreductase; PFAM: Luciferase-like, subgroup
YP_004489978.1	KEGG: ctt:CtCNB1_2551 putative GSH-dependent dehydroascorbate reductase; manually curated; PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal
YP_004489979.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_2552 transcriptional regulator, LysR family
YP_004489980.1	KEGG: dac:Daci_2043 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR
YP_004489981.1	TIGRFAM: Phenylacetic acid degradation-related protein; KEGG: dac:Daci_2042 aromatic catabolism protein-like protein
YP_004489982.1	PFAM: Multi antimicrobial extrusion protein MatE; KEGG: dac:Daci_2041 multi anti extrusion protein MatE
YP_004489983.1	TIGRFAM: DHAP synthase, class 1; KEGG: dac:Daci_2040 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004489984.1	KEGG: dac:Daci_2039 hypothetical protein
YP_004489985.1	KEGG: dac:Daci_2038 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated; SMART: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated
YP_004489986.1	KEGG: dac:Daci_2037 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004489987.1	TIGRFAM: Fumarylacetoacetase; KEGG: dac:Daci_2036 fumarylacetoacetase; PFAM: Fumarylacetoacetase, N-terminal; Fumarylacetoacetase, C-terminal-like
YP_004489988.1	PFAM: Sporulation/cell division region, bacteria; KEGG: dac:Daci_2035 sporulation domain-containing protein
YP_004489989.1	KEGG: dac:Daci_2034 hypothetical protein
YP_004489990.1	TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; KEGG: dac:Daci_2033 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004489991.1	PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: dac:Daci_2032 putative deoxyribonucleotide triphosphate pyrophosphatase
YP_004489992.1	KEGG: dac:Daci_2031 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related
YP_004489993.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: dac:Daci_2030 serine/threonine protein kinase
YP_004489994.1	KEGG: dac:Daci_2029 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal
YP_004489995.1	KEGG: dac:Daci_2028 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region
YP_004489996.1	KEGG: dac:Daci_2027 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6
YP_004489997.1	SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: dac:Daci_2026 (p)ppGpp synthetase I SpoT/RelA; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT; Metal-dependent phosphohydrolase, HD region, subdomain
YP_004489998.1	KEGG: dac:Daci_2025 silent information regulator protein Sir2; HAMAP: NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2
YP_004489999.1	KEGG: dac:Daci_2024 lytic murein transglycosylase; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like
YP_004490000.1	TIGRFAM: Transcription elongation factor GreB, prokaryotic; HAMAP: Transcription elongation factor greA; KEGG: dac:Daci_2023 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic
YP_004490001.1	KEGG: dac:Daci_2022 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004490002.1	PFAM: Amino acid permease-associated region; KEGG: dac:Daci_2021 amino acid permease-associated protein
YP_004490003.1	PFAM: Protein of unknown function DUF1486; KEGG: dac:Daci_2020 hypothetical protein
YP_004490004.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_2019 FAD dependent oxidoreductase
YP_004490005.1	PFAM: Globin, truncated bacterial-like; KEGG: dac:Daci_2018 globin
YP_004490006.1	KEGG: dac:Daci_2017 major facilitator transporter; manually curated; PFAM: Major facilitator superfamily MFS-1
YP_004490007.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2016 LysR family transcriptional regulator
YP_004490008.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: dac:Daci_2015 hypothetical protein
YP_004490009.1	KEGG: dac:Daci_2014 porin
YP_004490010.1	KEGG: dac:Daci_2013 hypothetical protein
YP_004490011.1	KEGG: dac:Daci_2012 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004490012.1	PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: dac:Daci_2011 hypothetical protein
YP_004490013.1	SMART: Helix-turn-helix, AraC domain; KEGG: dac:Daci_2010 AraC family transcriptional regulator
YP_004490014.1	KEGG: dac:Daci_2009 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004490015.1	KEGG: dac:Daci_2008 hypothetical protein
YP_004490016.1	PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: dac:Daci_2007 hypothetical protein
YP_004490017.1	KEGG: dac:Daci_2006 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004490018.1	KEGG: dac:Daci_2005 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004490019.1	TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: dac:Daci_2004 nitrite reductase (NAD(P)H) large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S region
YP_004490020.1	KEGG: dac:Daci_2003 nitrite reductase (NAD(P)H) small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004490021.1	KEGG: dac:Daci_2002 hypothetical protein
YP_004490022.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_4024 GCN5-related N-acetyltransferase
YP_004490023.1	KEGG: pen:PSEEN2235 hypothetical protein
YP_004490025.1	manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: dac:Daci_2001 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004490026.1	KEGG: rlt:Rleg2_5766 hypothetical protein
YP_004490027.1	KEGG: dac:Daci_0577 hypothetical protein
YP_004490028.1	manually curated
YP_004490029.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_1999 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004490030.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: net:Neut_0721 TonB-dependent receptor
YP_004490031.1	PFAM: Copper chaperone SCO1/SenC; KEGG: dac:Daci_1998 electron transport protein SCO1/SenC
YP_004490032.1	KEGG: dac:Daci_1997 hypothetical protein
YP_004490033.1	KEGG: dac:Daci_1996 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1
YP_004490034.1	KEGG: dac:Daci_1995 cobaltochelatase; PFAM: Cobalt chelatase, CobT subunit
YP_004490035.1	PFAM: ATPase associated with various cellular activities, AAA-5; KEGG: dac:Daci_1994 cobaltochelatase; SMART: ATPase, AAA+ type, core
YP_004490036.1	PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; KEGG: dac:Daci_1993 IclR family transcriptional regulator
YP_004490037.1	TIGRFAM: Sulphoacetaldehyde acetyltransferase; KEGG: dac:Daci_1992 sulfoacetaldehyde acetyltransferase; PFAM: Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004490038.1	KEGG: dac:Daci_1991 phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase
YP_004490039.1	PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: dac:Daci_1990 hypothetical protein
YP_004490040.1	KEGG: dac:Daci_1989 hypothetical protein
YP_004490041.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1988 LysR family transcriptional regulator
YP_004490042.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: dac:Daci_1987 NAD-dependent epimerase/dehydratase
YP_004490043.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: dac:Daci_1986 cobalamin synthesis protein P47K
YP_004490044.1	PFAM: Amidohydrolase 3; KEGG: dac:Daci_1985 amidohydrolase 3
YP_004490045.1	PFAM: Sodium/solute symporter; KEGG: dac:Daci_1984 Na+/solute symporter
YP_004490046.1	KEGG: dac:Daci_1983 hypothetical protein
YP_004490047.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1982 LysR family transcriptional regulator
YP_004490048.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_1981 LysR family transcriptional regulator
YP_004490049.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: dac:Daci_1980 4-hydroxythreonine-4-phosphate dehydrogenase
YP_004490050.1	manually curated; KEGG: dac:Daci_1979 hypothetical protein
YP_004490051.1	KEGG: dac:Daci_1978 hypothetical protein
YP_004490052.1	KEGG: dac:Daci_1977 hypothetical protein
YP_004490053.1	KEGG: dac:Daci_1976 hypothetical protein
YP_004490054.1	KEGG: dac:Daci_1975 hypothetical protein
YP_004490055.1	KEGG: dac:Daci_1974 hypothetical protein
YP_004490056.1	PFAM: Protein of unknown function DUF1304; KEGG: dac:Daci_1973 hypothetical protein
YP_004490057.1	KEGG: dac:Daci_1972 hypothetical protein
YP_004490058.1	PFAM: PRC-barrel; KEGG: dac:Daci_1971 PRC-barrel domain-containing protein
YP_004490059.1	KEGG: dac:Daci_1970 hypothetical protein
YP_004490060.1	KEGG: dac:Daci_1969 hypothetical protein
YP_004490061.1	KEGG: dac:Daci_1968 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004490062.1	KEGG: nar:Saro_2717 hypothetical protein
YP_004490063.1	KEGG: dac:Daci_1965 hypothetical protein
YP_004490064.1	TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: dac:Daci_1908 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal
YP_004490065.1	KEGG: dac:Daci_1907 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004490066.1	PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: dac:Daci_1906 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
YP_004490067.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: dac:Daci_1905 FKBP-type peptidylprolyl isomerase
YP_004490068.1	KEGG: dac:Daci_1904 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like
YP_004490069.1	KEGG: mep:MPQ_2694 RNA polymerase, sigma-24 subunit, ecf subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004490070.1	PFAM: FecR protein; KEGG: mep:MPQ_2695 anti-FecI sigma factor, FecR
YP_004490071.1	KEGG: ppg:PputGB1_3280 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004490072.1	KEGG: dac:Daci_1903 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal
YP_004490073.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1902 major facilitator transporter
YP_004490074.1	KEGG: dac:Daci_1901 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004490075.1	KEGG: dac:Daci_1900 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004490076.1	KEGG: dac:Daci_1899 5'-nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase
YP_004490077.1	manually curated; KEGG: dac:Daci_1895 hypothetical protein
YP_004490078.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1896 LysR family transcriptional regulator
YP_004490079.1	KEGG: dac:Daci_1894 hypothetical protein
YP_004490080.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1893 LysR family transcriptional regulator
YP_004490081.1	KEGG: dac:Daci_1892 hypothetical protein
YP_004490082.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_1891 hypothetical protein
YP_004490083.1	KEGG: dac:Daci_1890 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004490084.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_1889 TetR family transcriptional regulator
YP_004490085.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1888 major facilitator transporter
YP_004490086.1	KEGG: dac:Daci_1879 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004490087.1	KEGG: dac:Daci_1878 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004490088.1	PFAM: PepSY-associated TM helix; KEGG: dac:Daci_1877 PepSY-associated TM helix domain-containing protein
YP_004490089.1	KEGG: dac:Daci_1876 hypothetical protein
YP_004490090.1	KEGG: dac:Daci_1875 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction response regulator, receiver region
YP_004490091.1	TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Signal transduction response regulator, receiver region; HTH transcriptional regulator, MerR; KEGG: dac:Daci_1874 response regulator receiver protein; SMART: Signal transduction response regulator, receiver region
YP_004490092.1	KEGG: dac:Daci_1873 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004490093.1	KEGG: dac:Daci_1872 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004490094.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; KEGG: dac:Daci_1871 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif
YP_004490095.1	KEGG: mei:Msip34_2172 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2
YP_004490096.1	PFAM: FecR protein; KEGG: mei:Msip34_2171 anti-FecI sigma factor, FecR
YP_004490097.1	KEGG: axy:AXYL_00100 TonB-dependent siderophore receptor family protein 1; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004490099.1	TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: dac:Daci_1870 muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal
YP_004490100.1	TIGRFAM: Muconolactone delta-isomerase; KEGG: dac:Daci_1869 muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase
YP_004490101.1	KEGG: dac:Daci_1868 hypothetical protein
YP_004490103.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_1865 hypothetical protein
YP_004490104.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1864 LysR family transcriptional regulator
YP_004490105.1	KEGG: dac:Daci_1862 NAD-dependent formate dehydrogenase subunit delta
YP_004490106.1	KEGG: dac:Daci_1861 formate dehydrogenase subunit alpha; TIGRFAM: Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region
YP_004490107.1	PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: dac:Daci_1860 respiratory-chain NADH dehydrogenase domain-containing protein
YP_004490108.1	manually curated; PFAM: HTH transcriptional regulator, MarR; KEGG: dac:Daci_1859 MarR family transcriptional regulator; SMART: HTH transcriptional regulator, MarR
YP_004490109.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1856 major facilitator transporter
YP_004490110.1	KEGG: dac:Daci_1855 gluconate 2-dehydrogenase
YP_004490111.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: dac:Daci_1854 2Fe-2S iron-sulfur cluster-binding domain-containing protein
YP_004490112.1	KEGG: dac:Daci_1853 monooxygenase FAD-binding; PFAM: FAD dependent oxidoreductase
YP_004490113.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: dac:Daci_1852 Asp/Glu/hydantoin racemase
YP_004490114.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_1851 alpha/beta hydrolase fold protein
YP_004490115.1	KEGG: dac:Daci_1850 hypothetical protein
YP_004490116.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_1849 isochorismatase hydrolase
YP_004490117.1	KEGG: dac:Daci_1848 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
YP_004490118.1	PFAM: HipA-like, N-terminal; HipA-like, C-terminal; KEGG: bpt:Bpet1352 hypothetical protein
YP_004490119.1	KEGG: bbr:BB0528 putative DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004490120.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1847 LysR family transcriptional regulator
YP_004490121.1	PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; KEGG: dac:Daci_1846 hypothetical protein
YP_004490122.1	KEGG: dac:Daci_1845 restriction endonuclease
YP_004490123.1	PFAM: Patatin; KEGG: dac:Daci_1844 patatin
YP_004490124.1	PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: dac:Daci_1843 methionyl-tRNA synthetase
YP_004490125.1	KEGG: dac:Daci_1842 hypothetical protein
YP_004490126.1	PFAM: Protein of unknown function DUF161; KEGG: dac:Daci_1841 hypothetical protein
YP_004490127.1	KEGG: dac:Daci_1840 putative lipoprotein
YP_004490128.1	KEGG: dac:Daci_1839 hypothetical protein
YP_004490129.1	KEGG: dac:Daci_1838 chromosome segregation and condensation protein ScpA; HAMAP: Segregation and condensation protein A; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA
YP_004490130.1	PFAM: Radical SAM; KEGG: dac:Daci_1837 hypothetical protein
YP_004490131.1	PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: dac:Daci_1836 6-pyruvoyl tetrahydropterin synthase/hypothetical protein
YP_004490132.1	TIGRFAM: Aspartate decarboxylase; KEGG: dac:Daci_1835 aspartate alpha-decarboxylase; PFAM: Aspartate decarboxylase
YP_004490133.1	TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: dac:Daci_1834 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III
YP_004490134.1	TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: dac:Daci_1833 dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004490135.1	PFAM: Aminotransferase, class I/II; TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP: 8-amino-7-oxononanoate synthase; KEGG: dac:Daci_1832 8-amino-7-oxononanoate synthase
YP_004490136.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dac:Daci_1831 5-carboxymethyl-2-hydroxymuconate isomerase
YP_004490137.1	PFAM: DTW; KEGG: dac:Daci_1830 DTW domain-containing protein
YP_004490138.1	KEGG: dac:Daci_1829 hypothetical protein
YP_004490139.1	PFAM: Aminotransferase, class IV; KEGG: pna:Pnap_0939 para-aminobenzoate synthase, subunit I
YP_004490140.1	TIGRFAM: Para-aminobenzoate synthase, component I; KEGG: ctt:CtCNB1_3872 para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding, C-terminal
YP_004490141.1	KEGG: dac:Daci_1826 hypothetical protein
YP_004490142.1	KEGG: dac:Daci_1825 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004490143.1	KEGG: dac:Daci_1824 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004490144.1	KEGG: dac:Daci_1823 hypothetical protein
YP_004490145.1	TIGRFAM: Ketopantoate hydroxymethyltransferase; KEGG: dac:Daci_1822 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_004490146.1	KEGG: dac:Daci_1821 pantoate--beta-alanine ligase; TIGRFAM: Pantoate-beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase
YP_004490147.1	KEGG: dac:Daci_1820 hypothetical protein
YP_004490148.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1819 LysR family transcriptional regulator
YP_004490149.1	TIGRFAM: Diaminopimelate decarboxylase; KEGG: dac:Daci_1818 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_004490150.1	KEGG: dac:Daci_1817 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal
YP_004490151.1	TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: dac:Daci_1816 protein-export protein SecB; PFAM: Bacterial protein export chaperone SecB
YP_004490152.1	KEGG: dac:Daci_1815 glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin
YP_004490153.1	KEGG: dac:Daci_1814 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004490154.1	SMART: Phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase 1; KEGG: dac:Daci_1813 phosphoglyceromutase; PFAM: Phosphoglycerate mutase
YP_004490155.1	TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: dac:Daci_1812 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF
YP_004490156.1	PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: dac:Daci_1811 UBA/ThiF-type NAD/FAD-binding protein
YP_004490157.1	KEGG: dac:Daci_1810 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004490158.1	KEGG: dac:Daci_1809 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004490159.1	KEGG: dac:Daci_1808 histidine kinase; PFAM: CHASE3; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_004490160.1	KEGG: dac:Daci_1807 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328
YP_004490161.1	KEGG: dac:Daci_1806 hypothetical protein
YP_004490162.1	KEGG: dac:Daci_1805 transport-associated protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria
YP_004490163.1	PFAM: Uncharacterised conserved protein UCP012641; KEGG: dac:Daci_1804 hypothetical protein
YP_004490164.1	PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: dac:Daci_1803 pantetheine-phosphate adenylyltransferase
YP_004490165.1	KEGG: dac:Daci_1802 methyltransferase; TIGRFAM: Conserved hypothetical protein CHP00095; PFAM: Protein of unknown function methylase putative
YP_004490166.1	PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: dac:Daci_1801 peptidase M16 domain-containing protein
YP_004490167.1	KEGG: dac:Daci_1800 peptidase M16 domain-containing protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal
YP_004490168.1	TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: dac:Daci_1799 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core
YP_004490169.1	KEGG: dac:Daci_1798 hypothetical protein
YP_004490170.1	PFAM: Divalent ion tolerance protein, CutA1; KEGG: dac:Daci_1797 CutA1 divalent ion tolerance protein
YP_004490171.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: dac:Daci_1796 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal
YP_004490172.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: dac:Daci_1795 aldolase II superfamily protein
YP_004490173.1	KEGG: dac:Daci_1794 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004490174.1	KEGG: dac:Daci_1793 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase
YP_004490175.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: dac:Daci_1792 flavin reductase domain-containing protein
YP_004490176.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: dac:Daci_1791 putative dehydrogenase/oxygenase subunit
YP_004490177.1	KEGG: dac:Daci_1790 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004490178.1	KEGG: dac:Daci_1789 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004490179.1	KEGG: dac:Daci_1788 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004490180.1	TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: dac:Daci_1787 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004490181.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: dac:Daci_1786 flavoprotein oxygenase DIM6/NTAB family-like protein
YP_004490182.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_1785 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004490183.1	KEGG: dac:Daci_1784 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004490184.1	PFAM: NLPA lipoprotein; KEGG: dac:Daci_1783 NlpA lipoprotein
YP_004490185.1	PFAM: NLPA lipoprotein; KEGG: dac:Daci_1782 NlpA lipoprotein
YP_004490186.1	PFAM: ABC transporter-like; NIL domain; KEGG: dac:Daci_1781 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490187.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1780 binding-protein-dependent transport systems inner membrane component
YP_004490188.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_1779 acyl-CoA dehydrogenase type 2
YP_004490189.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_1778 acyl-CoA dehydrogenase type 2
YP_004490190.1	PFAM: NLPA lipoprotein; KEGG: dac:Daci_1777 NlpA lipoprotein
YP_004490191.1	TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: dac:Daci_1776 DszA family monooxygenase
YP_004490192.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: dac:Daci_1775 acyl-CoA dehydrogenase type 2
YP_004490193.1	KEGG: dac:Daci_1774 FMN reductase; TIGRFAM: FMN reductase, MsuE-like; PFAM: NADPH-dependent FMN reductase
YP_004490194.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_1773 acyl-CoA dehydrogenase type 2
YP_004490195.1	KEGG: dac:Daci_1772 putative sigma-54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004490196.1	TIGRFAM: Alkanesulphonate monooxygenase, FMN-dependent; KEGG: dac:Daci_1771 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup
YP_004490197.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1770 LysR family transcriptional regulator
YP_004490198.1	PFAM: Dicarboxylate carrier MatC N-terminal; KEGG: dac:Daci_1769 dicarboxylate carrier MatC domain-containing protein
YP_004490199.1	TIGRFAM: Malonate decarboxylase, alpha subunit; KEGG: dac:Daci_1768 malonate decarboxylase subunit alpha
YP_004490200.1	KEGG: dac:Daci_1767 malonate decarboxylase acyl carrier protein; TIGRFAM: Malonate decarboxylase delta subunit; PFAM: Malonate decarboxylase delta subunit
YP_004490201.1	KEGG: dac:Daci_1766 malonate decarboxylase subunit beta; TIGRFAM: Malonate decarboxylase, beta subunit; PFAM: Carboxyl transferase
YP_004490202.1	KEGG: dac:Daci_1765 malonate decarboxylase subunit gamma; TIGRFAM: Malonate decarboxylase gamma subunit; PFAM: Malonate decarboxylase gamma subunit
YP_004490203.1	KEGG: dac:Daci_1764 holo-ACP synthase, malonate decarboxylase-specific; TIGRFAM: Holo-ACP synthase, malonate decarboxylase-specific; PFAM: Holo-ACP synthase, malonate decarboxylase-specific
YP_004490204.1	KEGG: dac:Daci_1763 triphosphoribosyl-dephospho-CoA synthase; PFAM: Triphosphoribosyl-dephospho-CoA protein
YP_004490205.1	PFAM: Acyl transferase; KEGG: dac:Daci_1762 (acyl-carrier protein) S-malonyltransferase
YP_004490206.1	TIGRFAM: Acetate--CoA ligase; KEGG: dac:Daci_1761 acetate--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004490207.1	PFAM: MmgE/PrpD; KEGG: dac:Daci_1760 MmgE/PrpD family protein
YP_004490208.1	PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; CoA-binding; KEGG: dac:Daci_1759 CoA-binding domain-containing protein
YP_004490209.1	PFAM: Crotonase, core; KEGG: dac:Daci_1758 enoyl-CoA hydratase/isomerase
YP_004490210.1	KEGG: dac:Daci_1757 hypothetical protein
YP_004490211.1	KEGG: dac:Daci_1756 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004490212.1	KEGG: dac:Daci_1694 RNA polymerase sigma 32 subunit RpoH; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4
YP_004490213.1	KEGG: dac:Daci_1693 hypothetical protein
YP_004490214.1	PFAM: Fatty acid hydroxylase; KEGG: dac:Daci_1692 fatty acid hydroxylase
YP_004490215.1	PFAM: Fatty acid desaturase, type 1; KEGG: dac:Daci_1691 fatty acid desaturase
YP_004490216.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; KEGG: dac:Daci_1690 3-oxoacyl-(acyl carrier protein) synthase III
YP_004490217.1	KEGG: dac:Daci_1689 hypothetical protein
YP_004490218.1	manually curated; KEGG: dac:Daci_1688 cyclic nucleotide-binding protein
YP_004490219.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dac:Daci_1685 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS
YP_004490220.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; HAMP linker domain; KEGG: dac:Daci_1684 PAS/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004490221.1	PFAM: Copper chaperone SCO1/SenC; KEGG: dac:Daci_1683 electron transport protein SCO1/SenC
YP_004490222.1	KEGG: dac:Daci_1682 hypothetical protein
YP_004490223.1	KEGG: dac:Daci_1681 putative transmembrane cytochrome oxidase
YP_004490224.1	KEGG: dac:Daci_1680 putative transmembrane protein
YP_004490225.1	PFAM: Cytochrome c oxidase, subunit III; KEGG: dac:Daci_1679 cytochrome c oxidase subunit III
YP_004490226.1	KEGG: dac:Daci_1678 putative transmembrane protein
YP_004490227.1	PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dac:Daci_1677 cytochrome c oxidase assembly protein
YP_004490228.1	KEGG: dac:Daci_1676 hypothetical protein
YP_004490229.1	KEGG: dac:Daci_1675 cytochrome c oxidase subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I
YP_004490230.1	KEGG: dac:Daci_1674 cytochrome c oxidase subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane region; Cytochrome c, class I
YP_004490231.1	KEGG: dac:Daci_1672 biotin synthesis protein BioC
YP_004490232.1	KEGG: dac:Daci_1671 ComF family protein; manually curated; PFAM: Phosphoribosyltransferase
YP_004490233.1	KEGG: dac:Daci_1670 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004490234.1	KEGG: dac:Daci_1669 hypothetical protein
YP_004490235.1	KEGG: dac:Daci_1668 dehydratase; PFAM: MaoC-like dehydratase
YP_004490236.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dac:Daci_1667 lysine exporter protein LysE/YggA
YP_004490237.1	KEGG: dac:Daci_1666 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal
YP_004490238.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1665 LysR family transcriptional regulator
YP_004490239.1	PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dac:Daci_1664 short chain dehydrogenase
YP_004490240.1	PFAM: Protein of unknown function DUF1841; KEGG: dac:Daci_1663 hypothetical protein
YP_004490241.1	KEGG: dac:Daci_1662 class I cytochrome c
YP_004490242.1	KEGG: dac:Daci_1661 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core
YP_004490243.1	KEGG: dac:Daci_1660 GCN5-related N-acetyltransferase
YP_004490244.1	KEGG: dac:Daci_1659 hypothetical protein
YP_004490245.1	KEGG: dac:Daci_1658 surface antigen (D15); manually curated; PFAM: Bacterial surface antigen (D15)
YP_004490246.1	PFAM: Protein of unknown function DUF490; KEGG: dac:Daci_1657 hypothetical protein
YP_004490247.1	KEGG: rce:RC1_3132 hypothetical protein
YP_004490248.1	KEGG: dac:Daci_1607 hypothetical protein
YP_004490249.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-4; PAS fold-3; KEGG: dac:Daci_5399 PAS/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling; PAC motif; PAS
YP_004490250.1	KEGG: hypothetical protein
YP_004490251.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: dac:Daci_1606 glutathione S-transferase domain-containing protein
YP_004490252.1	KEGG: dac:Daci_1605 hypothetical protein
YP_004490253.1	KEGG: dac:Daci_1601 hypothetical protein
YP_004490254.1	KEGG: dac:Daci_1600 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004490255.1	SMART: Diguanylate cyclase, predicted; GAF; TIGRFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_1599 GAF sensor-containing diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; GAF
YP_004490256.1	KEGG: dac:Daci_1598 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490257.1	manually curated; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: dac:Daci_1597 two component transcriptional regulator; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004490258.1	KEGG: dac:Daci_1596 hypothetical protein
YP_004490259.1	KEGG: dac:Daci_1595 ABC transporter-like protein; PFAM: ABC transporter-like; Dual specificity phosphatase, catalytic domain; SMART: ATPase, AAA+ type, core; Dual specificity phosphatase, subgroup, catalytic domain
YP_004490260.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: dac:Daci_1594 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_004490261.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bph:Bphy_6041 LysR family transcriptional regulator
YP_004490262.1	PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6991 flavin-containing monooxygenase FMO
YP_004490263.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_3031 endoribonuclease L-PSP
YP_004490264.1	TIGRFAM: Acetylornithine deacetylase (ArgE); KEGG: pen:PSEEN2650 acetylornithine deacetylase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004490265.1	PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: bur:Bcep18194_C6647 cytosine/purines, uracil, thiamine, allantoin transporter
YP_004490266.1	PFAM: Amidase; KEGG: bpy:Bphyt_5709 indole acetimide hydrolase
YP_004490267.1	KEGG: dac:Daci_1593 arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: Arsenate reductase-like
YP_004490268.1	KEGG: dac:Daci_1592 xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004490269.1	KEGG: dac:Daci_1591 hydroxydechloroatrazine ethylaminohydrolase; PFAM: Amidohydrolase 1
YP_004490270.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1590 LysR family transcriptional regulator
YP_004490271.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1589 binding-protein-dependent transport systems inner membrane component
YP_004490272.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_1588 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490273.1	KEGG: dac:Daci_1587 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related
YP_004490274.1	KEGG: dac:Daci_1586 hypothetical protein
YP_004490275.1	PFAM: Domain of unknown function DUF1987; KEGG: dac:Daci_1585 putative lipoprotein
YP_004490276.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_1584 GCN5-related N-acetyltransferase
YP_004490277.1	KEGG: dac:Daci_1583 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004490278.1	KEGG: dac:Daci_1582 amidohydrolase; PFAM: Amidohydrolase 1
YP_004490279.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: dac:Daci_1581 aspartate carbamoyltransferase catalytic subunit
YP_004490280.1	PFAM: Phosphoribosyltransferase; KEGG: dac:Daci_1580 phosphoribosyltransferase
YP_004490281.1	TIGRFAM: Resolvase, holliday junction-type, YqgF-like; PFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: dac:Daci_1579 Holliday junction resolvase-like protein; SMART: Resolvase, RNase H-like fold
YP_004490282.1	KEGG: dac:Daci_1578 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF179
YP_004490283.1	KEGG: dac:Daci_1577 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal
YP_004490284.1	KEGG: dac:Daci_1576 CheA signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein
YP_004490285.1	KEGG: dac:Daci_1575 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004490286.1	KEGG: dac:Daci_1574 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004490287.1	KEGG: dac:Daci_1573 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004490288.1	KEGG: dac:Daci_1572 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004490289.1	KEGG: dac:Daci_1571 rubredoxin-type Fe(Cys)4 protein; manually curated; PFAM: Rubredoxin-type Fe(Cys)4 protein
YP_004490290.1	PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: dac:Daci_1570 phosphomethylpyrimidine kinase type-1
YP_004490291.1	PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: dac:Daci_1569 glutamate-1-semialdehyde aminotransferase
YP_004490292.1	KEGG: dac:Daci_1568 hypothetical protein
YP_004490293.1	KEGG: pop:POPTR_794848 hypothetical protein; PFAM: Methyladenine glycosylase
YP_004490294.1	PFAM: Cytochrome c, class I; KEGG: dac:Daci_1565 class I cytochrome c
YP_004490295.1	KEGG: dac:Daci_1564 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region
YP_004490296.1	PFAM: Helix-turn-helix, Fis-type; KEGG: aav:Aave_0895 DNA-binding protein fis
YP_004490297.1	KEGG: dac:Daci_1563 NifR3 family TIM-barrel protein; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase
YP_004490298.1	KEGG: dac:Daci_1562 hypothetical protein
YP_004490299.1	KEGG: dac:Daci_1561 hypothetical protein
YP_004490300.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1560 LysR family transcriptional regulator
YP_004490301.1	PFAM: Pirin, N-terminal; KEGG: dac:Daci_1559 pirin domain-containing protein
YP_004490302.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_1558 isochorismatase hydrolase
YP_004490303.1	KEGG: dac:Daci_1557 hypothetical protein; TIGRFAM: XapX domain; PFAM: Protein of unknown function DUF1427
YP_004490304.1	PFAM: Amidohydrolase 3; KEGG: dac:Daci_1556 amidohydrolase 3
YP_004490305.1	PFAM: Protein of unknown function DUF894, DitE; KEGG: dac:Daci_1554 hypothetical protein
YP_004490306.1	KEGG: dac:Daci_1553 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004490307.1	KEGG: dac:Daci_1552 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490308.1	PFAM: Outer membrane efflux protein; KEGG: dac:Daci_1551 outer membrane efflux protein
YP_004490309.1	KEGG: dac:Daci_1550 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004490310.1	KEGG: dac:Daci_1549 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004490311.1	KEGG: dac:Daci_1548 hypothetical protein
YP_004490312.1	KEGG: dac:Daci_1547 hypothetical protein
YP_004490313.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: dac:Daci_1546 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal
YP_004490314.1	KEGG: dac:Daci_1545 benzoylformate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004490315.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_1544 LysR family transcriptional regulator
YP_004490316.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; KEGG: dac:Daci_1543 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004490317.1	KEGG: dac:Daci_1542 hypothetical protein
YP_004490318.1	TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: dac:Daci_1541 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_004490319.1	KEGG: dac:Daci_1540 hypothetical protein
YP_004490320.1	KEGG: dac:Daci_1538 hypothetical protein
YP_004490321.1	PFAM: Uncharacterised protein family UPF0167; KEGG: sml:Smlt3152 hypothetical protein
YP_004490322.1	KEGG: dac:Daci_1534 GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related
YP_004490323.1	PFAM: MOSC, N-terminal beta barrel; Molybdenum cofactor sulfurase, C-terminal; KEGG: dac:Daci_1533 MOSC domain-containing protein
YP_004490324.1	KEGG: dac:Daci_1532 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase
YP_004490325.1	PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: dac:Daci_1531 thiol:disulfide interchange protein DsbC
YP_004490326.1	PFAM: Peptidase M61; KEGG: dac:Daci_1530 peptidase M61 domain-containing protein
YP_004490327.1	PFAM: Crotonase, core; KEGG: dac:Daci_1529 enoyl-CoA hydratase/isomerase
YP_004490328.1	PFAM: Uncharacterised conserved protein UCP028101; KEGG: dac:Daci_1528 hypothetical protein
YP_004490329.1	PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1527 periplasmic lipoprotein-like protein
YP_004490330.1	PFAM: Protein of unknown function DUF1111; KEGG: dac:Daci_1526 hypothetical protein
YP_004490331.1	PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1525 putative iron-regulated protein
YP_004490332.1	KEGG: ctt:CtCNB1_1959 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004490333.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1524 major facilitator transporter
YP_004490334.1	KEGG: dac:Daci_1523 hypothetical protein
YP_004490335.1	KEGG: dac:Daci_1522 hypothetical protein
YP_004490336.1	PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1521 ModE family transcriptional regulator
YP_004490337.1	KEGG: dac:Daci_1520 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004490338.1	KEGG: dac:Daci_1519 molybdate ABC transporter inner membrane subunit; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004490339.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: dac:Daci_1518 molybdate ABC transporter ATPase subunit; PFAM: ABC transporter-like; Transport-associated OB, type 1
YP_004490340.1	TIGRFAM: Formate dehydrogenase, subunit FdhD; HAMAP: Protein fdhD; KEGG: dac:Daci_1517 formate dehydrogenase family accessory protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD
YP_004490341.1	KEGG: dac:Daci_1516 hypothetical protein
YP_004490342.1	TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; KEGG: dac:Daci_1515 (dimethylallyl)adenosine tRNA methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB
YP_004490343.1	KEGG: dac:Daci_1514 hypothetical protein
YP_004490344.1	KEGG: dac:Daci_1513 hypothetical protein
YP_004490345.1	KEGG: dac:Daci_1512 hypothetical protein
YP_004490346.1	PFAM: Helix-turn-helix type 3; KEGG: dac:Daci_1511 hypothetical protein
YP_004490347.1	PFAM: NLP/P60; KEGG: dac:Daci_1510 NLP/P60 protein
YP_004490348.1	TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: dac:Daci_1509 signal recognition particle protein; SMART: ATPase, AAA+ type, core
YP_004490349.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-4; PAS fold; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: dac:Daci_1508 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region
YP_004490350.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: dac:Daci_1507 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_004490351.1	PFAM: Cytochrome c assembly protein; KEGG: dac:Daci_1506 cytochrome c assembly protein
YP_004490352.1	KEGG: dac:Daci_1505 hypothetical protein
YP_004490353.1	KEGG: dac:Daci_1504 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490354.1	KEGG: dac:Daci_1503 fis family two component sigma-54-specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004490355.1	KEGG: dac:Daci_1502 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004490356.1	KEGG: dac:Daci_1501 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone
YP_004490357.1	KEGG: dac:Daci_1500 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase
YP_004490358.1	KEGG: dac:Daci_1499 hypothetical protein
YP_004490359.1	KEGG: dac:Daci_1498 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004490360.1	KEGG: dac:Daci_1497 zinc finger-domain-containing protein; manually curated; TIGRFAM: Zinc finger/thioredoxin putative
YP_004490361.1	KEGG: dac:Daci_1496 ribosomal protein L11 methyltransferase; TIGRFAM: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase
YP_004490362.1	SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: dac:Daci_1495 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl phosphate synthase, large subunit, N-terminal
YP_004490363.1	KEGG: dac:Daci_1494 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment
YP_004490364.1	PFAM: Redoxin; KEGG: dac:Daci_1493 redoxin domain-containing protein
YP_004490365.1	KEGG: dac:Daci_1492 hypothetical protein
YP_004490366.1	TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; KEGG: dac:Daci_1491 UDP-N-acetylmuramate; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004490367.1	KEGG: dac:Daci_1490 hypothetical protein
YP_004490368.1	PFAM: Protein of unknown function DUF446; KEGG: dac:Daci_1489 hypothetical protein
YP_004490369.1	TIGRFAM: DHAP synthase, class 1; KEGG: dac:Daci_1488 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004490371.1	KEGG: ajs:Ajs_3645 hypothetical protein
YP_004490372.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: dac:Daci_1487 peptidase U62 modulator of DNA gyrase
YP_004490373.1	KEGG: dac:Daci_1486 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein
YP_004490374.1	PFAM: Uncharacterised protein family UPF0227; KEGG: dac:Daci_1485 hypothetical protein
YP_004490375.1	PFAM: Ribonuclease II/R; KEGG: dac:Daci_1484 ribonuclease II
YP_004490376.1	TIGRFAM: TonB, C-terminal; KEGG: dac:Daci_1483 TonB family protein
YP_004490377.1	TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: dac:Daci_1482 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004490378.1	KEGG: dac:Daci_1481 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Glycosyl transferase, family 51
YP_004490379.1	TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; KEGG: dac:Daci_1480 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC
YP_004490380.1	KEGG: dac:Daci_1477 hypothetical protein
YP_004490381.1	KEGG: dac:Daci_1476 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase
YP_004490382.1	KEGG: dac:Daci_1475 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain
YP_004490383.1	TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; KEGG: dac:Daci_1474 cell division protein FtsA; SMART: Cell division protein FtsA domain
YP_004490384.1	PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: dac:Daci_1473 polypeptide-transport-associated domain-containing protein
YP_004490385.1	PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: dac:Daci_1472 D-alanine--D-alanine ligase
YP_004490386.1	PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: dac:Daci_1471 UDP-N-acetylmuramate--L-alanine ligase
YP_004490387.1	TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: dac:Daci_1470 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28
YP_004490388.1	KEGG: dac:Daci_1469 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein
YP_004490389.1	TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: dac:Daci_1468 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_004490390.1	KEGG: dac:Daci_1467 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
YP_004490391.1	TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: dac:Daci_1466 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004490392.1	PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: dac:Daci_1465 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_004490393.1	KEGG: dac:Daci_1464 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004490394.1	KEGG: dac:Daci_1463 cell division protein FtsL; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL
YP_004490395.1	TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: dac:Daci_1462 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW
YP_004490396.1	PFAM: MraZ domain; manually curated; TIGRFAM: MraZ; KEGG: dac:Daci_1461 cell division protein MraZ; HAMAP: MraZ
YP_004490397.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: dac:Daci_1460 ATP-dependent protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2
YP_004490398.1	PFAM: Proteasome, subunit alpha/beta; KEGG: dac:Daci_1459 ATP-dependent protease peptidase subunit
YP_004490399.1	KEGG: dac:Daci_1458 hypothetical protein
YP_004490400.1	TIGRFAM: RNA polymerase-binding, DksA; KEGG: dac:Daci_1457 TraR/DksA family transcriptional regulator
YP_004490401.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: dac:Daci_1456 cobalamin synthesis protein P47K
YP_004490402.1	KEGG: dac:Daci_1455 integrase family protein; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004490403.1	PFAM: Protein of unknown function DUF484; KEGG: dac:Daci_1454 hypothetical protein
YP_004490404.1	TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: dac:Daci_1453 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_004490405.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_1452 beta-lactamase domain-containing protein
YP_004490406.1	KEGG: dac:Daci_1451 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4
YP_004490407.1	KEGG: dac:Daci_1450 anti-FecI sigma factor FecR; TIGRFAM: RNA polymerase sigma-70; PFAM: FecR protein; RNA polymerase sigma factor 70, region 4 type 2
YP_004490408.1	KEGG: dac:Daci_1449 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004490409.1	KEGG: dac:Daci_1448 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004490410.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_1447 hypothetical protein
YP_004490411.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1446 major facilitator transporter
YP_004490412.1	KEGG: dac:Daci_1445 hypothetical protein
YP_004490413.1	PFAM: Amidase; KEGG: dac:Daci_1444 amidase
YP_004490414.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1443 LysR family transcriptional regulator
YP_004490415.1	TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: dac:Daci_1442 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004490417.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1441 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490418.1	KEGG: dac:Daci_1440 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated; SMART: HTH transcriptional regulator, GntR
YP_004490419.1	TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; KEGG: dac:Daci_1439 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal
YP_004490420.1	KEGG: dac:Daci_1438 hypothetical protein
YP_004490421.1	HAMAP: Fumarate hydratase class II; KEGG: dac:Daci_1437 fumarate hydratase; PFAM: Fumarate lyase; Fumarase C, C-terminal
YP_004490422.1	KEGG: dac:Daci_1436 hypothetical protein
YP_004490423.1	KEGG: dac:Daci_1435 gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase
YP_004490424.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_1419 FAD dependent oxidoreductase
YP_004490425.1	KEGG: dac:Daci_1418 hypothetical protein; TIGRFAM: Protein of unknown function DUF165; PFAM: Protein of unknown function DUF165
YP_004490426.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dac:Daci_1417 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004490427.1	KEGG: dac:Daci_1416 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004490428.1	KEGG: pmy:Pmen_3762 addiction module antitoxin; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system
YP_004490429.1	KEGG: pmy:Pmen_3761 hypothetical protein
YP_004490430.1	KEGG: dac:Daci_1408 hypothetical protein
YP_004490431.1	KEGG: dac:Daci_1407 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004490432.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: dac:Daci_1406 aldolase II superfamily protein
YP_004490433.1	KEGG: dac:Daci_1405 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004490434.1	KEGG: dac:Daci_1404 hypothetical protein
YP_004490435.1	PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: dac:Daci_1403 electron transfer flavoprotein subunit alpha
YP_004490436.1	KEGG: dac:Daci_1402 electron transfer flavoprotein subunit alpha/beta; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
YP_004490437.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: dac:Daci_1401 2-nitropropane dioxygenase NPD
YP_004490438.1	KEGG: dac:Daci_1400 hypothetical protein
YP_004490439.1	KEGG: dac:Daci_1399 hypothetical protein
YP_004490440.1	KEGG: dac:Daci_1398 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004490441.1	PFAM: Crotonase, core; KEGG: dac:Daci_1397 enoyl-CoA hydratase
YP_004490442.1	KEGG: dac:Daci_1396 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004490443.1	PFAM: Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: dac:Daci_1395 acyl-CoA dehydrogenase domain-containing protein
YP_004490444.1	KEGG: dac:Daci_1394 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004490445.1	KEGG: dac:Daci_1393 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004490446.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1392 LysR family transcriptional regulator
YP_004490447.1	KEGG: dac:Daci_1391 hypothetical protein
YP_004490448.1	KEGG: dac:Daci_1388 heat shock protein HtpX; HAMAP: protease htpX; PFAM: Peptidase M48, Ste24p; Peptidase M48B, HtpX peptidase N-terminal
YP_004490449.1	KEGG: dac:Daci_1387 putative transmembrane protein
YP_004490450.1	PFAM: Protein of unknown function DUF88; KEGG: dac:Daci_1386 hypothetical protein
YP_004490451.1	TIGRFAM: Dihydroorotase homodimeric type; KEGG: dac:Daci_1385 dihydroorotase; PFAM: Amidohydrolase 1
YP_004490452.1	KEGG: dac:Daci_1384 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004490453.1	KEGG: dac:Daci_1383 hypothetical protein
YP_004490454.1	PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_1382 dimethylmenaquinone methyltransferase
YP_004490455.1	KEGG: dac:Daci_1381 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004490456.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1380 LysR family transcriptional regulator
YP_004490457.1	KEGG: dac:Daci_1379 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding
YP_004490458.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_1378 porin
YP_004490459.1	PFAM: CoA-binding; KEGG: dac:Daci_1377 CoA-binding domain-containing protein
YP_004490460.1	KEGG: dac:Daci_1376 hypothetical protein
YP_004490461.1	PFAM: Protein of unknown function DUF1214; Protein of unknown function DUF1254; KEGG: dac:Daci_1375 hypothetical protein
YP_004490462.1	PFAM: Protein of unknown function DUF1214; Protein of unknown function DUF1254; KEGG: dac:Daci_1374 hypothetical protein
YP_004490463.1	KEGG: dac:Daci_1373 beta-lactamase domain-containing protein
YP_004490464.1	KEGG: dac:Daci_1372 hypothetical protein
YP_004490465.1	KEGG: dac:Daci_1371 hypothetical protein
YP_004490466.1	KEGG: dac:Daci_1370 hypothetical protein
YP_004490467.1	PFAM: Peptidase M20, dimerisation; Peptidase M20; KEGG: dac:Daci_1369 peptidase dimerisation domain-containing protein
YP_004490468.1	PFAM: Sugar isomerase (SIS); KEGG: dac:Daci_1368 RpiR family transcriptional regulator
YP_004490469.1	KEGG: axy:AXYL_00851 ornibactin receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004490470.1	PFAM: FecR protein; KEGG: axy:AXYL_02945 FecR family protein 11
YP_004490471.1	KEGG: smt:Smal_2018 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004490472.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1367 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490473.1	KEGG: dac:Daci_1366 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004490474.1	KEGG: dac:Daci_1365 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004490475.1	KEGG: dac:Daci_1364 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004490476.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_1363 LysR family transcriptional regulator
YP_004490477.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dac:Daci_1362 tripartite ATP-independent periplasmic transporter DctQ
YP_004490478.1	KEGG: dac:Daci_1361 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004490479.1	KEGG: dac:Daci_1360 TRAP dicarboxylate transporter subunit DctP; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004490480.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_1359 TetR family transcriptional regulator
YP_004490481.1	KEGG: dac:Daci_1358 hypothetical protein
YP_004490482.1	KEGG: dac:Daci_1357 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004490483.1	KEGG: dac:Daci_1356 phthalate 4,5-dioxygenase; PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region
YP_004490484.1	KEGG: dac:Daci_1355 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004490485.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1354 major facilitator transporter
YP_004490486.1	KEGG: dac:Daci_1353 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004490487.1	KEGG: dac:Daci_1352 vanillate monooxygenase; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004490488.1	KEGG: dac:Daci_1351 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004490489.1	KEGG: dac:Daci_1350 peptidase S9 prolyl oligopeptidase
YP_004490490.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: dac:Daci_1349 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490491.1	PFAM: Thioesterase superfamily; KEGG: dac:Daci_1348 thioesterase superfamily protein
YP_004490492.1	PFAM: Protein of unknown function DUF583; KEGG: dac:Daci_1347 hypothetical protein
YP_004490493.1	KEGG: dac:Daci_1346 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004490494.1	PFAM: Multi antimicrobial extrusion protein MatE; KEGG: dac:Daci_1345 multi anti extrusion protein MatE
YP_004490495.1	KEGG: dac:Daci_1344 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004490496.1	PFAM: Crotonase, core; KEGG: dac:Daci_1343 enoyl-CoA hydratase
YP_004490497.1	KEGG: dac:Daci_1342 hypothetical protein
YP_004490498.1	KEGG: dac:Daci_1341 putative hydrolase
YP_004490499.1	KEGG: dac:Daci_1340 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004490500.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: dac:Daci_1339 3-hydroxyacyl-CoA dehydrogenase NAD-binding
YP_004490501.1	PFAM: Protein of unknown function DUF2147; KEGG: dac:Daci_1338 hypothetical protein
YP_004490502.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_1337 acyl-CoA dehydrogenase domain-containing protein
YP_004490503.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_1336 TetR family transcriptional regulator
YP_004490504.1	KEGG: dac:Daci_1335 hypothetical protein
YP_004490505.1	KEGG: dac:Daci_1333 hypothetical protein
YP_004490506.1	KEGG: dac:Daci_1332 hypothetical protein
YP_004490507.1	TIGRFAM: Tape measure domain; KEGG: dac:Daci_1331 hypothetical protein
YP_004490508.1	PFAM: Protein of unknown function DUF1799, phage-related; KEGG: dac:Daci_1330 hypothetical protein
YP_004490509.1	KEGG: dac:Daci_1329 hypothetical protein
YP_004490510.1	KEGG: dac:Daci_1328 hypothetical protein
YP_004490511.1	KEGG: dac:Daci_1327 hypothetical protein
YP_004490513.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: dac:Daci_1326 putative phage repressor
YP_004490514.1	KEGG: dac:Daci_1325 hypothetical protein
YP_004490515.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_1324 nucleoid occlusion protein
YP_004490516.1	KEGG: dac:Daci_1323 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490517.1	KEGG: dac:Daci_1322 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004490518.1	TIGRFAM: Acetylglutamate kinase; KEGG: dac:Daci_1321 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase
YP_004490519.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: dac:Daci_1320 glycosyl transferase family protein
YP_004490520.1	manually curated; KEGG: dac:Daci_1319 glycosyl transferase family protein
YP_004490521.1	PFAM: Glycosyl transferase, family 2; Methyltransferase type 12; KEGG: dac:Daci_1318 glycosyl transferase family protein
YP_004490522.1	PFAM: Acyltransferase 3; KEGG: aav:Aave_4366 acyltransferase 3
YP_004490524.1	PFAM: Acyltransferase 3; KEGG: aav:Aave_4061 acyltransferase 3
YP_004490525.1	KEGG: dac:Daci_1316 type 12 methyltransferase; manually curated; PFAM: Methyltransferase type 12
YP_004490526.1	KEGG: aav:Aave_4144 hypothetical protein
YP_004490527.1	PFAM: ABC transporter-like; KEGG: aav:Aave_4145 ABC transporter-related protein; SMART: ATPase, AAA+ type, core
YP_004490528.1	KEGG: dze:Dd1591_2117 acyltransferase 3
YP_004490529.1	PFAM: ABC-2 type transporter; KEGG: aav:Aave_4146 ABC-2 type transporter
YP_004490530.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: aav:Aave_4147 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004490531.1	KEGG: aav:Aave_4148 hypothetical protein
YP_004490532.1	KEGG: dac:Daci_1310 hypothetical protein
YP_004490533.1	KEGG: dac:Daci_1309 general secretion pathway protein D; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like
YP_004490534.1	KEGG: dac:Daci_1308 hypothetical protein
YP_004490535.1	PFAM: General secretion pathway protein M; KEGG: dac:Daci_1307 general secretion pathway protein M
YP_004490536.1	PFAM: Fimbrial assembly; KEGG: dac:Daci_1306 fimbrial assembly family protein
YP_004490537.1	KEGG: dac:Daci_1305 general secretory pathway protein K
YP_004490538.1	KEGG: dac:Daci_1304 general secretion pathway protein J
YP_004490539.1	KEGG: dac:Daci_1303 general secretion pathway protein I
YP_004490540.1	TIGRFAM: General secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal; KEGG: dac:Daci_1302 general secretion pathway protein H
YP_004490541.1	KEGG: dac:Daci_1301 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal
YP_004490542.1	PFAM: Type II secretion system F domain; KEGG: dac:Daci_1300 type II secretion system protein
YP_004490543.1	TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: dac:Daci_1299 general secretory pathway protein E; SMART: ATPase, AAA+ type, core
YP_004490544.1	TIGRFAM: Bordetella pertussis Bvg accessory factor; HAMAP: Type III pantothenate kinase; KEGG: dac:Daci_1298 pantothenate kinase; PFAM: Bordetella pertussis Bvg accessory factor
YP_004490545.1	KEGG: dac:Daci_1297 transport-associated protein; PFAM: Peptidoglycan-binding lysin domain; Transport-associated; SMART: Peptidoglycan-binding Lysin subgroup
YP_004490546.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: dac:Daci_1296 Asp/Glu/hydantoin racemase
YP_004490547.1	KEGG: dac:Daci_1295 hypothetical protein
YP_004490548.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1294 LysR family transcriptional regulator
YP_004490549.1	SMART: Rhodanese-like; KEGG: dac:Daci_1293 rhodanese domain-containing protein
YP_004490550.1	PFAM: Protein of unknown function DUF45; KEGG: dac:Daci_1292 hypothetical protein
YP_004490551.1	KEGG: dac:Daci_1291 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004490552.1	TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; KEGG: dac:Daci_1290 histidinol-phosphate phosphatase family protein
YP_004490553.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: dac:Daci_1289 glycyl-tRNA synthetase subunit beta
YP_004490554.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: dac:Daci_1288 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit
YP_004490555.1	KEGG: dac:Daci_1287 DNA-binding domain-containing protein; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Band 7 protein
YP_004490556.1	KEGG: dac:Daci_1286 hypothetical protein
YP_004490557.1	KEGG: dac:Daci_1285 FAD dependent oxidoreductase; TIGRFAM: FAD-dependent oxidoreductase, HpnW; PFAM: FAD dependent oxidoreductase
YP_004490558.1	KEGG: dac:Daci_1284 2-aminoethylphosphonate ABC transport system, permease; TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein, putative; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004490559.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_1283 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490560.1	KEGG: dac:Daci_1282 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: Bacterial extracellular solute-binding, family 1
YP_004490561.1	KEGG: dac:Daci_1281 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004490562.1	PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: dac:Daci_1280 permease for cytosine/purines uracil thiamine allantoin
YP_004490563.1	KEGG: dac:Daci_1279 LysR family transcriptional regulator; TIGRFAM: Transcriptional regulator, aminoethylphosphonate utilisation-associated, LysR-type; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004490564.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: dac:Daci_1278 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_004490565.1	TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: dac:Daci_1277 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_004490566.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dac:Daci_1276 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_004490567.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dac:Daci_1275 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004490568.1	KEGG: dac:Daci_1274 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004490569.1	TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: dac:Daci_1273 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004490570.1	TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: dac:Daci_1272 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004490571.1	PFAM: Cystathionine beta-synthase, core; Transporter-associated region; KEGG: dac:Daci_1271 CBS domain-containing protein
YP_004490572.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_1270 GCN5-related N-acetyltransferase
YP_004490573.1	KEGG: dac:Daci_1269 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004490574.1	KEGG: dac:Daci_1268 hypothetical protein
YP_004490575.1	TIGRFAM: Phenylalanine-4-hydroxylase, monomeric form; KEGG: dac:Daci_1267 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal
YP_004490576.1	KEGG: dac:Daci_1266 PGAP1 family protein
YP_004490577.1	KEGG: dac:Daci_1265 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004490578.1	KEGG: dac:Daci_1264 beta-lactamase domain-containing protein
YP_004490579.1	KEGG: mms:mma_3619 TonB-dependent receptor for iron transport; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004490580.1	KEGG: ctt:CtCNB1_4256 catecholate siderophore receptor fiu; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004490581.1	HAMAP: PKHD-type hydroxylase ybiX; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: ctt:CtCNB1_4257 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit
YP_004490582.1	KEGG: dac:Daci_1263 hypothetical protein
YP_004490583.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: dac:Daci_1262 lytic transglycosylase catalytic
YP_004490584.1	KEGG: dac:Daci_1261 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004490585.1	KEGG: dac:Daci_1260 ExsB protein; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like
YP_004490586.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: dac:Daci_1259 glutathione S-transferase domain-containing protein
YP_004490587.1	PFAM: Peptidase M20, dimerisation; Peptidase M20; KEGG: dac:Daci_1258 peptidase dimerisation domain-containing protein
YP_004490588.1	PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dac:Daci_1257 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region
YP_004490589.1	KEGG: dac:Daci_1256 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490590.1	KEGG: dac:Daci_1255 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004490591.1	KEGG: dac:Daci_1254 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004490592.1	KEGG: dac:Daci_1253 hypothetical protein
YP_004490593.1	KEGG: dac:Daci_1252 hypothetical protein
YP_004490594.1	KEGG: dac:Daci_1251 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF185
YP_004490595.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_1250 short-chain dehydrogenase/reductase SDR
YP_004490596.1	PFAM: Dihydroneopterin aldolase; KEGG: dac:Daci_1249 dihydroneopterin aldolase
YP_004490597.1	KEGG: dac:Daci_1247 C32 tRNA thiolase; HAMAP: tRNA 2-thiocytidine biosynthesis protein TtcA; PFAM: PP-loop
YP_004490598.1	KEGG: dac:Daci_1246 hypothetical protein
YP_004490599.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dac:Daci_1243 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490600.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1242 binding-protein-dependent transport systems inner membrane component
YP_004490601.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1241 binding-protein-dependent transport systems inner membrane component
YP_004490602.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dac:Daci_1240 extracellular solute-binding protein
YP_004490603.1	PFAM: Protein of unknown function DUF2501; KEGG: dac:Daci_1239 hypothetical protein
YP_004490604.1	PFAM: Phosphoglycerate mutase; KEGG: dac:Daci_1238 phosphoglycerate mutase
YP_004490605.1	KEGG: dac:Daci_1237 hypothetical protein
YP_004490606.1	KEGG: dac:Daci_1236 hypothetical protein
YP_004490607.1	KEGG: dac:Daci_1235 hypothetical protein
YP_004490608.1	manually curated; KEGG: dac:Daci_1234 hypothetical protein
YP_004490609.1	KEGG: dac:Daci_1233 hypothetical protein
YP_004490610.1	PFAM: YhhN-like; Fatty acid hydroxylase; KEGG: dac:Daci_1232 YhhN family protein
YP_004490611.1	KEGG: dac:Daci_1231 hypothetical protein
YP_004490612.1	KEGG: dac:Daci_1230 hypothetical protein
YP_004490613.1	TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dac:Daci_1229 magnesium-transporting ATPase MgtA; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal
YP_004490614.1	PFAM: MgtC/SapB transporter; KEGG: dac:Daci_1228 MgtC/SapB transporter
YP_004490615.1	SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: dac:Daci_1227 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal
YP_004490616.1	KEGG: dac:Daci_1226 Holliday junction DNA helicase RuvA; TIGRFAM: Bacterial DNA recombination protein RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal
YP_004490617.1	PFAM: PhoH-like protein; KEGG: dac:Daci_1225 PhoH family protein
YP_004490618.1	KEGG: dac:Daci_1224 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0054; PFAM: Uncharacterised protein family UPF0054
YP_004490619.1	KEGG: dac:Daci_1223 quinone oxidoreductase; TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004490620.1	KEGG: dac:Daci_1222 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004490621.1	KEGG: dac:Daci_1221 hypothetical protein
YP_004490622.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1220 LysR family transcriptional regulator
YP_004490623.1	PFAM: Protein of unknown function DUF81; KEGG: dac:Daci_1219 hypothetical protein
YP_004490624.1	KEGG: dac:Daci_2124 Arc domain-containing protein
YP_004490625.1	KEGG: dac:Daci_1216 CRISPR-associated Csy4 family protein; TIGRFAM: CRISPR-associated protein Csy4; PFAM: CRISPR-associated protein Csy4
YP_004490626.1	KEGG: dac:Daci_1215 CRISPR-associated Csy3 family protein; TIGRFAM: CRISPR-associated protein Csy3; PFAM: CRISPR-associated protein Csy3
YP_004490627.1	KEGG: dac:Daci_1214 CRISPR-associated Csy2 family protein; TIGRFAM: CRISPR-associated protein Csy2; PFAM: CRISPR-associated protein Csy2
YP_004490628.1	KEGG: dac:Daci_1213 CRISPR-associated Csy1 family protein; TIGRFAM: CRISPR-associated protein Csy1; PFAM: CRISPR-associated protein Csy1
YP_004490629.1	PFAM: Plasmid maintenance system killer; KEGG: dac:Daci_1212 plasmid maintenance system killer
YP_004490630.1	TIGRFAM: Addiction module antidote protein, HigA; KEGG: dac:Daci_1211 XRE family plasmid maintenance system antidote protein
YP_004490631.1	TIGRFAM: Helicase Cas3, CRISPR-associated, Yersinia-type; KEGG: ajs:Ajs_0488 CRISPR-associated helicase Cas3 family protein
YP_004490632.1	KEGG: dac:Daci_1209 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1, YPEST subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1
YP_004490633.1	KEGG: dac:Daci_1208 hypothetical protein; TIGRFAM: Peptidase M20A, peptidase V related; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004490634.1	TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: dac:Daci_1207 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004490635.1	KEGG: dac:Daci_1206 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004490636.1	KEGG: dac:Daci_1205 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490637.1	KEGG: dac:Daci_1204 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004490638.1	PFAM: Protein of unknown function DUF336; KEGG: dac:Daci_1203 hypothetical protein
YP_004490639.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; PAS fold-3; KEGG: dac:Daci_1202 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004490640.1	TIGRFAM: AMP nucleosidase; KEGG: dac:Daci_1201 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase, N-terminal; Nucleoside phosphorylase
YP_004490641.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_1200 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004490642.1	KEGG: dac:Daci_1199 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_004490643.1	KEGG: dac:Daci_1198 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004490644.1	PFAM: Crotonase, core; KEGG: dac:Daci_1197 enoyl-CoA hydratase/isomerase
YP_004490645.1	KEGG: dac:Daci_1196 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004490646.1	KEGG: dac:Daci_1195 OsmC family protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein
YP_004490647.1	KEGG: dac:Daci_1194 hypothetical protein
YP_004490648.1	PFAM: Aminoglycoside phosphotransferase; KEGG: dac:Daci_1193 serine/threonine protein kinase
YP_004490649.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: dac:Daci_1192 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_004490650.1	KEGG: dac:Daci_1191 hypothetical protein
YP_004490651.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1190 major facilitator transporter
YP_004490652.1	TIGRFAM: Redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: dac:Daci_1189 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004490653.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_1188 endoribonuclease L-PSP
YP_004490654.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1187 major facilitator transporter
YP_004490655.1	KEGG: dac:Daci_1186 urease accessory protein UreD; HAMAP: Urease accessory protein UreD; PFAM: Urease accessory protein UreD
YP_004490656.1	PFAM: Urease, alpha/gamma subunit; TIGRFAM: Urease, alpha/gamma subunit; HAMAP: Urease, gamma subunit; KEGG: dac:Daci_1185 urease subunit gamma
YP_004490657.1	KEGG: dac:Daci_1184 HupE/UreJ protein
YP_004490658.1	PFAM: Urease, beta subunit; TIGRFAM: Urease, beta subunit; HAMAP: Urease subunit beta; KEGG: dac:Daci_1183 urease subunit beta
YP_004490659.1	TIGRFAM: Urease, alpha subunit; KEGG: dac:Daci_1182 urease subunit alpha; PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal
YP_004490660.1	KEGG: dac:Daci_1181 UreE urease accessory domain-containing protein; HAMAP: Urease accessory protein ureE; PFAM: UreE urease accessory, C-terminal; UreE urease accessory, N-terminal
YP_004490661.1	manually curated; HAMAP: Urease accessory protein UreF; KEGG: dac:Daci_1180 urease accessory protein UreF; PFAM: Urease accessory protein UreF
YP_004490662.1	TIGRFAM: Urease accessory protein UreG; HAMAP: Urease accessory protein UreG; KEGG: dac:Daci_1179 urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like
YP_004490663.1	KEGG: dac:Daci_1178 hypothetical protein
YP_004490664.1	KEGG: dac:Daci_1177 hypothetical protein
YP_004490665.1	KEGG: dac:Daci_1176 hypothetical protein; TIGRFAM: Protein of unknown function DUF11; PFAM: Protein of unknown function DUF11
YP_004490666.1	KEGG: dac:Daci_1175 heat shock protein 90; PFAM: ATP-binding region, ATPase-like; Heat shock protein Hsp90, C-terminal; SMART: ATP-binding region, ATPase-like
YP_004490667.1	KEGG: dac:Daci_1174 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein
YP_004490668.1	KEGG: dac:Daci_1173 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_004490669.1	HAMAP: PKHD-type hydroxylase ybiX; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dac:Daci_1172 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit
YP_004490670.1	KEGG: dac:Daci_1171 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004490671.1	PFAM: FecR protein; KEGG: dac:Daci_1170 anti-FecI sigma factor FecR
YP_004490672.1	KEGG: dac:Daci_1169 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004490673.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dac:Daci_1168 pseudouridine synthase; SMART: RNA-binding S4
YP_004490674.1	KEGG: dac:Daci_1167 hypothetical protein
YP_004490675.1	KEGG: dac:Daci_1166 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004490676.1	KEGG: dac:Daci_1165 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004490677.1	KEGG: dac:Daci_1164 hypothetical protein
YP_004490678.1	KEGG: dac:Daci_1163 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004490679.1	KEGG: dac:Daci_1160 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding
YP_004490680.1	KEGG: dac:Daci_1159 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004490681.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1158 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490682.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_1157 inner-membrane translocator
YP_004490683.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_1156 inner-membrane translocator
YP_004490684.1	KEGG: dac:Daci_1155 hypothetical protein
YP_004490685.1	KEGG: dac:Daci_1154 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004490686.1	PFAM: AMP-dependent synthetase/ligase; KEGG: dac:Daci_1153 putative phenylacetate-CoA ligase
YP_004490687.1	KEGG: dac:Daci_1152 hypothetical protein
YP_004490688.1	KEGG: dac:Daci_1151 hypothetical protein
YP_004490689.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1150 LysR family transcriptional regulator
YP_004490690.1	KEGG: dac:Daci_1149 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004490691.1	PFAM: Protein of unknown function DUF1840; KEGG: dac:Daci_1148 hypothetical protein
YP_004490692.1	KEGG: dac:Daci_1147 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004490693.1	KEGG: dac:Daci_1146 hypothetical protein
YP_004490694.1	PFAM: aminopeptidase; KEGG: dac:Daci_1145 putative zinc protease protein
YP_004490695.1	KEGG: dac:Daci_1144 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490696.1	KEGG: dac:Daci_1143 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004490697.1	PFAM: Sulfatase; Protein of unknown function DUF1705; KEGG: dac:Daci_1142 sulfatase
YP_004490698.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: dac:Daci_1141 CMP/dCMP deaminase zinc-binding
YP_004490699.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1140 binding-protein-dependent transport systems inner membrane component
YP_004490700.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1139 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490701.1	KEGG: dac:Daci_1138 NMT1/THI5-like domain-containing protein
YP_004490702.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: dac:Daci_1137 CMP/dCMP deaminase zinc-binding
YP_004490703.1	KEGG: dac:Daci_1136 NMT1/THI5-like domain-containing protein
YP_004490704.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dac:Daci_1135 2OG-Fe(II) oxygenase
YP_004490705.1	PFAM: Acyl-CoA-binding protein, ACBP; KEGG: dac:Daci_1134 acyl-CoA-binding protein
YP_004490706.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1133 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490707.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dac:Daci_1132 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004490708.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_1131 extracellular ligand-binding receptor
YP_004490709.1	KEGG: dac:Daci_1130 molybdopterin oxidoreductase; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region
YP_004490710.1	PFAM: ABC-1; KEGG: dac:Daci_1129 hypothetical protein
YP_004490711.1	KEGG: dac:Daci_1128 hypothetical protein
YP_004490712.1	PFAM: GumN; KEGG: dac:Daci_1127 GumN family protein
YP_004490713.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: dac:Daci_1126 fumarylacetoacetate (FAA) hydrolase
YP_004490714.1	KEGG: dac:Daci_1125 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004490715.1	KEGG: dac:Daci_1124 hypothetical protein
YP_004490716.1	KEGG: dac:Daci_1123 hypothetical protein
YP_004490717.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1122 major facilitator transporter
YP_004490718.1	KEGG: dac:Daci_1121 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004490719.1	KEGG: dac:Daci_1120 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_004490720.1	KEGG: dac:Daci_1119 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal
YP_004490721.1	PFAM: Glycerol-3-phosphate responsive antiterminator; KEGG: dac:Daci_1118 GlpP family transcriptional regulator
YP_004490722.1	KEGG: dac:Daci_1117 membrane protein AbrB duplication; TIGRFAM: AbrB duplication, membrane protein; PFAM: Putative ammonia monooxygenase
YP_004490723.1	PFAM: Haemerythrin/HHE cation-binding motif; KEGG: dac:Daci_1116 hemerythrin HHE cation-binding domain-containing protein
YP_004490724.1	SMART: Hedgehog/intein hint, N-terminal; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Intein splicing site; KEGG: pol:Bpro_4588 ribonucleoside reductase; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal
YP_004490725.1	KEGG: dac:Daci_1114 carbonate dehydratase; PFAM: Carbonic anhydrase
YP_004490726.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dac:Daci_1113 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004490727.1	TIGRFAM: Nitrate reductase, gamma subunit; KEGG: dac:Daci_1112 respiratory nitrate reductase subunit gamma; PFAM: Nitrate reductase, gamma subunit
YP_004490728.1	KEGG: dac:Daci_1111 nitrate reductase molybdenum cofactor assembly chaperone; TIGRFAM: Nitrate reductase, delta subunit; PFAM: Nitrate reductase, delta subunit
YP_004490729.1	KEGG: dac:Daci_1110 nitrate reductase subunit beta; TIGRFAM: Nitrate reductase, beta subunit
YP_004490730.1	TIGRFAM: Nitrate reductase, alpha subunit; KEGG: dac:Daci_1109 nitrate reductase subunit alpha; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_004490731.1	KEGG: dac:Daci_1108 nitrite transporter; TIGRFAM: Nitrate transporter; PFAM: Major facilitator superfamily MFS-1
YP_004490732.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1107 major facilitator transporter
YP_004490733.1	KEGG: aav:Aave_0658 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004490734.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: aav:Aave_0657 TonB-dependent receptor
YP_004490735.1	PFAM: Methyltransferase type 12; KEGG: aav:Aave_0656 methyltransferase type 12
YP_004490736.1	PFAM: Major facilitator superfamily MFS-1; KEGG: aav:Aave_0655 major facilitator superfamily transporter
YP_004490737.1	KEGG: dac:Daci_1106 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004490738.1	KEGG: dac:Daci_1105 GAF sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; HAMP linker domain; GAF; ATP-binding region, ATPase-like; SMART: HAMP linker domain; ATP-binding region, ATPase-like
YP_004490739.1	PFAM: Protein of unknown function DUF399; KEGG: dac:Daci_1104 hypothetical protein
YP_004490740.1	KEGG: dac:Daci_1103 hypothetical protein
YP_004490741.1	PFAM: Protein of unknown function DUF445, transmembrane; KEGG: dac:Daci_1102 hypothetical protein
YP_004490742.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: ctt:CtCNB1_4391 TonB-dependent receptor
YP_004490743.1	PFAM: Periplasmic binding protein; KEGG: ctt:CtCNB1_4390 ferric vibrioferrin-binding periplasmic protein PvuB
YP_004490744.1	PFAM: Bile acid:sodium symporter; KEGG: dac:Daci_1101 bile acid:sodium symporter
YP_004490745.1	KEGG: dac:Daci_1100 putative sigma-54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004490746.1	KEGG: dac:Daci_1099 propionyl-CoA carboxylase; PFAM: Carboxyl transferase
YP_004490747.1	KEGG: dac:Daci_1098 hypothetical protein
YP_004490748.1	PFAM: CoA-binding; KEGG: dac:Daci_1097 CoA-binding domain-containing protein
YP_004490749.1	KEGG: dac:Daci_1096 carbamoyl-phosphate synthase subunit L; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal
YP_004490750.1	PFAM: Biotin/lipoyl attachment; KEGG: dac:Daci_1095 biotin/lipoyl attachment domain-containing protein
YP_004490751.1	KEGG: dac:Daci_1094 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004490752.1	KEGG: dac:Daci_1093 hypothetical protein
YP_004490753.1	TIGRFAM: Signal transduction histidine kinase, heavy metal sensor; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; KEGG: dac:Daci_1092 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004490754.1	TIGRFAM: Signal transduction response regulator, heavy metal response; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: dac:Daci_1091 two component heavy metal response transcriptional regulator; SMART: Signal transduction response regulator, receiver region
YP_004490755.1	KEGG: dac:Daci_1090 hypothetical protein
YP_004490756.1	PFAM: Outer membrane efflux protein; KEGG: dac:Daci_1089 outer membrane efflux protein
YP_004490757.1	KEGG: dac:Daci_1088 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004490758.1	KEGG: dac:Daci_1087 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004490759.1	PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: bmj:BMULJ_03494 putative cytosine/purines, uracil, thiamine, and allantoin transporter
YP_004490760.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bcm:Bcenmc03_4306 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004490761.1	KEGG: dac:Daci_1086 hypothetical protein
YP_004490762.1	manually curated; KEGG: dac:Daci_1085 hypothetical protein
YP_004490763.1	KEGG: dac:Daci_1084 hypothetical protein
YP_004490764.1	KEGG: dac:Daci_1083 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004490765.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1082 LysR family transcriptional regulator
YP_004490766.1	TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: dac:Daci_1081 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT
YP_004490767.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: dac:Daci_1080 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004490768.1	KEGG: dac:Daci_1079 nitric oxide dioxygenase; PFAM: Oxidoreductase FAD-binding region; Globin, subset; Oxidoreductase FAD/NAD(P)-binding
YP_004490769.1	KEGG: dac:Daci_1078 anaerobic nitric oxide reductase transcription regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; GAF
YP_004490770.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_1076 hypothetical protein
YP_004490771.1	KEGG: dac:Daci_1075 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004490772.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: dac:Daci_1074 class V aminotransferase
YP_004490773.1	KEGG: dac:Daci_1073 carbamoyl-phosphate synthase subunit L; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; Carboxyl transferase
YP_004490774.1	KEGG: dac:Daci_1072 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004490775.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_1071 TetR family transcriptional regulator
YP_004490776.1	PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_1070 extracellular ligand-binding receptor
YP_004490777.1	KEGG: dac:Daci_1069 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal
YP_004490778.1	KEGG: dac:Daci_1068 twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E
YP_004490779.1	KEGG: dac:Daci_1067 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004490780.1	KEGG: dac:Daci_1066 twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E
YP_004490781.1	KEGG: dac:Daci_1065 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004490782.1	PFAM: Transport-associated; KEGG: dac:Daci_1064 transport-associated protein
YP_004490783.1	KEGG: dac:Daci_1063 phosphoheptose isomerase
YP_004490784.1	TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: dac:Daci_1062 hypothetical protein; PFAM: Uncharacterised protein family UPF0102
YP_004490785.1	PFAM: Tetrapyrrole methylase; manually curated; TIGRFAM: Uncharacterised protein family UPF0011; KEGG: dac:Daci_1061 uroporphyrin-III C/tetrapyrrole methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I
YP_004490786.1	KEGG: dac:Daci_1060 molecular chaperone, HSP70 class
YP_004490787.1	KEGG: dac:Daci_1059 hypothetical protein
YP_004490788.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: dac:Daci_1058 OsmC family protein
YP_004490789.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dac:Daci_1057 extracellular solute-binding protein
YP_004490790.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1056 binding-protein-dependent transport systems inner membrane component
YP_004490791.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1055 binding-protein-dependent transport systems inner membrane component
YP_004490792.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1054 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490793.1	PFAM: Luciferase-like, subgroup; KEGG: dac:Daci_1053 luciferase family protein
YP_004490794.1	KEGG: dac:Daci_1052 hypothetical protein
YP_004490795.1	KEGG: dac:Daci_1051 hypothetical protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004490796.1	KEGG: dac:Daci_1050 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter
YP_004490797.1	KEGG: dac:Daci_1049 hypothetical protein
YP_004490798.1	KEGG: dac:Daci_1048 ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17
YP_004490799.1	TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase, dimerisation; KEGG: dac:Daci_1047 DNA-directed RNA polymerase subunit alpha; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
YP_004490800.1	TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: nve:NEMVE_v1g156832 hypothetical protein; SMART: RNA-binding S4
YP_004490801.1	KEGG: dac:Daci_1045 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11
YP_004490802.1	KEGG: dac:Daci_1044 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13
YP_004490803.1	TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: ribosomal protein L36; PFAM: Ribosomal protein L36
YP_004490804.1	manually curated; TIGRFAM: SecY protein; KEGG: dac:Daci_1042 preprotein translocase subunit SecY; PFAM: SecY protein
YP_004490805.1	KEGG: dac:Daci_1041 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15
YP_004490806.1	KEGG: dac:Daci_1040 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region
YP_004490807.1	KEGG: dac:Daci_1039 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal
YP_004490808.1	KEGG: dac:Daci_1038 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5
YP_004490809.1	KEGG: dac:Daci_1037 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain
YP_004490810.1	PFAM: Ribosomal protein S8; KEGG: dac:Daci_1036 30S ribosomal protein S8
YP_004490811.1	PFAM: Ribosomal protein S14; KEGG: dac:Daci_1035 30S ribosomal protein S14
YP_004490812.1	PFAM: Ribosomal protein L5; KEGG: dac:Daci_1034 50S ribosomal protein L5
YP_004490813.1	KEGG: dac:Daci_1033 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; SMART: KOW
YP_004490814.1	KEGG: dac:Daci_1032 ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e
YP_004490816.1	KEGG: dac:Daci_1031 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_004490817.1	KEGG: dac:Daci_1030 extracellular solute-binding protein
YP_004490818.1	PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: dac:Daci_1029 putative integral membrane protein
YP_004490819.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1028 binding-protein-dependent transport systems inner membrane component
YP_004490820.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1027 binding-protein-dependent transport systems inner membrane component
YP_004490821.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_1026 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490822.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_1025 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490823.1	KEGG: dac:Daci_1024 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004490824.1	PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; TIGRFAM: Glycerol kinase; HAMAP: Glycerol kinase; KEGG: dac:Daci_1023 glycerol kinase
YP_004490825.1	KEGG: dac:Daci_1022 hypothetical protein
YP_004490826.1	KEGG: dac:Daci_1021 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004490827.1	KEGG: dac:Daci_1020 thiamine pyrophosphate-binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region
YP_004490828.1	KEGG: dac:Daci_1019 hypothetical protein
YP_004490829.1	KEGG: dac:Daci_1018 hypothetical protein
YP_004490830.1	TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: dac:Daci_1017 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent
YP_004490831.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: dac:Daci_1016 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase
YP_004490832.1	KEGG: dac:Daci_1015 phosphoesterase PA-phosphatase-like protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004490833.1	PFAM: Ferritin/Dps protein; KEGG: dac:Daci_1014 ferritin Dps family protein
YP_004490834.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_1013 LysR family transcriptional regulator
YP_004490835.1	PFAM: MHYT; KEGG: dac:Daci_1012 putative integral membrane sensor protein
YP_004490836.1	TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: dac:Daci_1011 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004490837.1	TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dac:Daci_1010 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region
YP_004490838.1	TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: dac:Daci_1009 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_004490839.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1008 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490840.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_1007 transport system permease
YP_004490841.1	PFAM: Bacterial transport system permease protein; KEGG: dac:Daci_1006 transport system permease
YP_004490842.1	PFAM: Periplasmic binding protein; KEGG: dac:Daci_1005 periplasmic-binding protein
YP_004490843.1	PFAM: Putative esterase; KEGG: dac:Daci_1004 putative esterase
YP_004490844.1	KEGG: dac:Daci_1003 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004490845.1	KEGG: dac:Daci_1002 HPr kinase/phosphorylase; HAMAP: HPr kinase/phosphorylase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal
YP_004490846.1	PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: dac:Daci_1001 putative PTS IIA-like nitrogen-regulatory protein PtsN
YP_004490847.1	KEGG: dac:Daci_1000 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_004490848.1	TIGRFAM: SAICAR synthetase; KEGG: dac:Daci_0999 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_004490849.1	KEGG: dac:Daci_0998 PfpI family intracellular peptidase; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI
YP_004490850.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_0997 hypothetical protein
YP_004490851.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0996 LysR family transcriptional regulator
YP_004490852.1	PFAM: Heat shock protein 70; KEGG: rso:RSp0521 chaperone transmembrane protein
YP_004490853.1	PFAM: Heat shock protein DnaJ, N-terminal; KEGG: bbe:BBR47_58260 hypothetical protein
YP_004490854.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0995 LysR family transcriptional regulator
YP_004490855.1	PFAM: Aminotransferase, class IV; KEGG: dac:Daci_0994 hypothetical protein
YP_004490856.1	KEGG: dac:Daci_0993 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004490857.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0992 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004490858.1	KEGG: dac:Daci_0991 hypothetical protein
YP_004490859.1	TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: dac:Daci_0990 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_004490860.1	TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: dac:Daci_0989 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
YP_004490861.1	KEGG: dac:Daci_0988 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5
YP_004490862.1	KEGG: dac:Daci_0987 hypothetical protein
YP_004490863.1	PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: dac:Daci_0986 RpiR family transcriptional regulator
YP_004490864.1	KEGG: dac:Daci_0985 ribokinase-like domain-containing protein; PFAM: Protein of unknown function DUF2090; Carbohydrate/purine kinase
YP_004490865.1	KEGG: dac:Daci_0984 myo-inositol catabolism IolB domain-containing protein
YP_004490866.1	KEGG: dac:Daci_0983 hypothetical protein
YP_004490867.1	KEGG: dac:Daci_0982 hypothetical protein
YP_004490868.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0981 LysR family transcriptional regulator
YP_004490869.1	TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: dac:Daci_0980 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004490870.1	PFAM: Outer membrane protein, OmpW; KEGG: dac:Daci_0979 OmpW family protein
YP_004490871.1	PFAM: Lipase, GDSL; KEGG: dac:Daci_0978 GDSL family lipase
YP_004490872.1	TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: dac:Daci_0977 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C
YP_004490873.1	KEGG: dac:Daci_0976 peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease
YP_004490874.1	KEGG: dac:Daci_0975 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004490875.1	KEGG: dac:Daci_0974 phage SPO1 DNA polymerase-related protein
YP_004490876.1	KEGG: dac:Daci_0973 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like
YP_004490877.1	PFAM: Endoribonuclease L-PSP; KEGG: dac:Daci_0972 endoribonuclease L-PSP
YP_004490878.1	PFAM: Alanine racemase, N-terminal; KEGG: dac:Daci_0971 alanine racemase domain-containing protein
YP_004490879.1	KEGG: dac:Daci_0969 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase
YP_004490880.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0968 LysR family transcriptional regulator
YP_004490881.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0967 major facilitator transporter
YP_004490882.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_0966 porin
YP_004490883.1	KEGG: dac:Daci_0965 ferredoxin; PFAM: Ferredoxin; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_004490884.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dac:Daci_0964 Rieske (2Fe-2S) domain-containing protein
YP_004490885.1	KEGG: dac:Daci_0963 hypothetical protein
YP_004490886.1	KEGG: dac:Daci_0962 hypothetical protein
YP_004490887.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0961 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004490888.1	KEGG: dac:Daci_0960 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004490889.1	KEGG: dac:Daci_0959 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, N-terminal TPP binding region
YP_004490890.1	KEGG: dac:Daci_0958 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004490891.1	KEGG: dac:Daci_0957 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004490892.1	KEGG: dac:Daci_0956 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004490893.1	KEGG: dac:Daci_0955 hypothetical protein
YP_004490894.1	PFAM: Protein of unknown function DUF891; KEGG: cli:Clim_0656 protein of unknown function DUF891
YP_004490895.1	KEGG: bam:Bamb_3584 hypothetical protein
YP_004490896.1	TIGRFAM: MTA/SAH nucleosidase; KEGG: dac:Daci_0953 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: Nucleoside phosphorylase
YP_004490897.1	HAMAP: Aspartate dehydrogenase, NAD biosynthesis, prokaryotic; KEGG: dac:Daci_0952 L-aspartate dehydrogenase; PFAM: Aspartate dehydrogenase; Aspartate/homoserine dehydrogenase, NAD-binding
YP_004490898.1	KEGG: dac:Daci_0951 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004490899.1	KEGG: dac:Daci_0950 alpha/beta hydrolase fold protein; manually curated; PFAM: Alpha/beta hydrolase fold-1
YP_004490900.1	PFAM: Cupin 2, conserved barrel; KEGG: dac:Daci_0949 cupin 2 domain-containing protein
YP_004490901.1	PFAM: Major facilitator superfamily MFS-1; KEGG: axy:AXYL_06710 major facilitator superfamily protein 56
YP_004490902.1	PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: axy:AXYL_06711 NAD binding domain of 6-phosphogluconate dehydrogenase family protein 11
YP_004490903.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: axy:AXYL_06712 regulatory protein, TetR family protein 31
YP_004490904.1	KEGG: pfs:PFLU4094 putative transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004490905.1	KEGG: pfs:PFLU4095 putative transporter-like membrane protein
YP_004490906.1	KEGG: dac:Daci_0946 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004490907.1	KEGG: dac:Daci_0945 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004490908.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0944 LysR family transcriptional regulator
YP_004490909.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dac:Daci_0943 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004490910.1	KEGG: dac:Daci_0942 hypothetical protein
YP_004490911.1	KEGG: dac:Daci_0941 export-related chaperone CsaA; TIGRFAM: Secretion chaperone CsaA; PFAM: tRNA-binding region
YP_004490912.1	SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dac:Daci_0939 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004490913.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: dac:Daci_0938 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004490914.1	PFAM: Nucleotidyl transferase; KEGG: dac:Daci_0937 nucleotidyl transferase
YP_004490915.1	PFAM: Protein of unknown function DUF81; KEGG: dac:Daci_0936 putative integral membrane protein
YP_004490916.1	TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: dac:Daci_0935 fructose-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase, class-II
YP_004490917.1	KEGG: dac:Daci_0934 histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like
YP_004490918.1	KEGG: dac:Daci_0933 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004490919.1	KEGG: dac:Daci_0932 PAP2 (acid phosphatase) superfamily protein-like protein
YP_004490920.1	KEGG: dac:Daci_0931 phosphoesterase PA-phosphatase-like protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004490921.1	TIGRFAM: Pyruvate kinase; KEGG: dac:Daci_0930 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta
YP_004490922.1	KEGG: dac:Daci_0929 hypothetical protein
YP_004490923.1	KEGG: dac:Daci_0928 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004490924.1	TIGRFAM: Conserved hypothetical protein CHP03118; Twin-arginine translocation pathway, signal sequence; KEGG: dac:Daci_0927 hypothetical protein
YP_004490925.1	KEGG: dac:Daci_0926 abortive infection protein
YP_004490926.1	PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: dac:Daci_0925 peptidase M24
YP_004490927.1	KEGG: dac:Daci_0924 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004490928.1	KEGG: dac:Daci_0923 transcriptional regulator TrmB; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004490929.1	KEGG: dac:Daci_0922 beta-lactamase domain-containing protein
YP_004490930.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: dac:Daci_0921 OsmC family protein
YP_004490931.1	KEGG: dac:Daci_0920 hypothetical protein
YP_004490932.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: dac:Daci_0919 pirin domain-containing protein
YP_004490933.1	KEGG: dac:Daci_0918 ribosomal subunit interface protein
YP_004490934.1	PFAM: Peptidase C26; KEGG: dac:Daci_0917 peptidase C26
YP_004490935.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_0916 LysR family transcriptional regulator
YP_004490936.1	PFAM: Extradiol ring-cleavage dioxygenase LigAB, LigA subunit; KEGG: dac:Daci_0915 protocatechuate 4,5-dioxygenase subunit alpha
YP_004490937.1	KEGG: dac:Daci_0914 protocatechuate 4,5-dioxygenase subunit beta; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
YP_004490938.1	KEGG: dac:Daci_0913 FKBP-type peptidylprolyl isomerase
YP_004490939.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0912 LysR family transcriptional regulator
YP_004490940.1	KEGG: dac:Daci_0911 hypothetical protein
YP_004490941.1	KEGG: dac:Daci_0910 fumarate lyase; PFAM: Fumarate lyase
YP_004490942.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: dac:Daci_0909 carboxymuconolactone decarboxylase
YP_004490943.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: dac:Daci_0908 pirin domain-containing protein
YP_004490944.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_0907 glutathione S-transferase domain-containing protein
YP_004490945.1	KEGG: dac:Daci_0906 hypothetical protein
YP_004490946.1	KEGG: dac:Daci_0905 hypothetical protein
YP_004490947.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_0904 porin
YP_004490948.1	PFAM: HipA-like, N-terminal; HipA-like, C-terminal; KEGG: dac:Daci_0903 hypothetical protein
YP_004490949.1	PFAM: Protein of unknown function DUF924, bacterial; KEGG: dac:Daci_0902 hypothetical protein
YP_004490950.1	PFAM: Acyltransferase 3; KEGG: dac:Daci_0901 acyltransferase 3
YP_004490951.1	PFAM: DTW; KEGG: dac:Daci_0900 DTW domain-containing protein
YP_004490952.1	PFAM: Methyltransferase type 12; KEGG: dac:Daci_0899 type 12 methyltransferase
YP_004490953.1	KEGG: bur:Bcep18194_A3957 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004490954.1	KEGG: dac:Daci_0897 hypothetical protein
YP_004490955.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0896 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004490956.1	KEGG: dac:Daci_0895 exonuclease subunit SbcD; TIGRFAM: Exonuclease SbcD; PFAM: Metallophosphoesterase
YP_004490957.1	PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: dac:Daci_0894 SMC domain-containing protein
YP_004490958.1	KEGG: dac:Daci_0893 hypothetical protein
YP_004490959.1	KEGG: dac:Daci_0892 hypothetical protein
YP_004490960.1	PFAM: RDD; KEGG: dac:Daci_0891 RDD domain-containing protein
YP_004490961.1	KEGG: pva:Pvag_1640 hypothetical protein
YP_004490962.1	KEGG: dac:Daci_0890 asparaginase; PFAM: Asparaginase/glutaminase
YP_004490963.1	KEGG: dac:Daci_0889 glutathione peroxidase; PFAM: Glutathione peroxidase
YP_004490964.1	PFAM: Ferritin/Dps protein; KEGG: dac:Daci_0888 ferritin Dps family protein
YP_004490965.1	KEGG: dac:Daci_0887 peptidoglycan glycosyltransferase; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004490966.1	KEGG: dac:Daci_0885 protein tyrosine/serine phosphatase
YP_004490967.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; SWIB domain; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: dac:Daci_0884 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; SWIB/MDM2 domain
YP_004490968.1	KEGG: dac:Daci_0883 nuclear protein SET; PFAM: SET; SMART: SET
YP_004490969.1	KEGG: dac:Daci_0882 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal
YP_004490970.1	PFAM: Sporulation/cell division region, bacteria; KEGG: dac:Daci_0881 sporulation domain-containing protein
YP_004490971.1	PFAM: N-formylglutamate amidohydrolase; KEGG: dac:Daci_0880 N-formylglutamate amidohydrolase
YP_004490972.1	KEGG: dac:Daci_0879 hypothetical protein
YP_004490973.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0878 LysR family transcriptional regulator
YP_004490974.1	KEGG: dac:Daci_0877 histidine kinase; PFAM: Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004490975.1	KEGG: dac:Daci_0876 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004490976.1	PFAM: HTH transcriptional regulator, MarR; KEGG: dac:Daci_0875 MarR family transcriptional regulator
YP_004490977.1	TIGRFAM: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; KEGG: dac:Daci_0874 RecA protein; SMART: ATPase, AAA+ type, core
YP_004490978.1	HAMAP: Regulatory protein recX; KEGG: dac:Daci_0873 regulatory protein RecX
YP_004490979.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_0872 hypothetical protein
YP_004490980.1	KEGG: dac:Daci_0871 hypothetical protein
YP_004490981.1	TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, subtype; KEGG: dac:Daci_0870 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding
YP_004490982.1	TIGRFAM: Succinyl-CoA synthetase, beta subunit; KEGG: dac:Daci_0869 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase
YP_004490983.1	SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: dac:Daci_0868 succinyl-CoA synthetase subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding
YP_004490984.1	KEGG: dac:Daci_0867 integral membrane protein TerC; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC
YP_004490985.1	KEGG: dac:Daci_0866 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related
YP_004490986.1	KEGG: dac:Daci_0865 FHA domain-containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated
YP_004490987.1	KEGG: hna:Hneap_0014 type IV pilin structural subunit
YP_004490988.1	KEGG: pap:PSPA7_5160 hypothetical protein
YP_004490989.1	KEGG: pnu:Pnuc_0327 short-chain dehydrogenase/reductase SDR; manually curated; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004490990.1	PFAM: FAD linked oxidase, N-terminal; KEGG: dar:Daro_1709 FAD linked oxidase, N-terminal
YP_004490991.1	KEGG: maq:Maqu_1646 hypothetical protein
YP_004490992.1	PFAM: UbiA prenyltransferase; KEGG: pap:PSPA7_6246 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
YP_004490993.1	PFAM: Acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: pnu:Pnuc_0330 acid phosphatase/vanadium-dependent haloperoxidase related
YP_004490994.1	KEGG: dac:Daci_0861 molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region
YP_004490995.1	PFAM: Peptidase M48, Ste24p; KEGG: dac:Daci_0860 peptidase M48 Ste24p
YP_004490996.1	PFAM: Membrane protein of unknown function; KEGG: dac:Daci_0859 membrane protein of unknown function
YP_004490997.1	KEGG: dac:Daci_0858 hypothetical protein
YP_004490998.1	KEGG: dac:Daci_0857 integral membrane protein TerC; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC
YP_004490999.1	PFAM: Protein of unknown function DUF1289; KEGG: dac:Daci_0856 hypothetical protein
YP_004491001.1	KEGG: dac:Daci_0855 hypothetical protein
YP_004491002.1	PFAM: YaeQ; KEGG: dac:Daci_0854 YaeQ family protein
YP_004491003.1	PFAM: Acyltransferase 3; KEGG: dac:Daci_0853 acyltransferase 3
YP_004491004.1	TIGRFAM: Adenylosuccinate lyase; KEGG: dac:Daci_0852 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase
YP_004491005.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_0851 glutathione S-transferase domain-containing protein
YP_004491006.1	HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: dac:Daci_0850 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Glutamate-ammonia ligase adenylyltransferase
YP_004491007.1	TIGRFAM: Conserved hypothetical protein CHP02099; KEGG: dac:Daci_0849 hypothetical protein
YP_004491008.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dac:Daci_0848 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004491009.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; KEGG: dac:Daci_0847 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif
YP_004491010.1	KEGG: dac:Daci_0846 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004491011.1	PFAM: Alanine racemase, N-terminal; KEGG: dac:Daci_0845 putative D-serine deaminase (d-serine dehydratase) protein
YP_004491012.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dac:Daci_0844 OmpA/MotB domain-containing protein
YP_004491013.1	KEGG: dac:Daci_0843 MltA domain-containing protein; manually curated; PFAM: MltA; 3D
YP_004491014.1	PFAM: Protein of unknown function DUF894, DitE; KEGG: dac:Daci_0842 hypothetical protein
YP_004491015.1	KEGG: dac:Daci_0841 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004491016.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: dac:Daci_0840 indolepyruvate ferredoxin oxidoreductase
YP_004491017.1	KEGG: dac:Daci_0839 preprotein translocase subunit YajC; TIGRFAM: YajC; PFAM: YajC
YP_004491018.1	KEGG: dac:Daci_0838 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_004491019.1	KEGG: dac:Daci_0837 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_004491020.1	PFAM: Protein of unknown function DUF1631; KEGG: dac:Daci_0836 hypothetical protein
YP_004491021.1	KEGG: dac:Daci_0835 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A
YP_004491022.1	KEGG: dac:Daci_0834 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004491023.1	TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: dac:Daci_0833 peptide deformylase; PFAM: Formylmethionine deformylase
YP_004491024.1	KEGG: dac:Daci_0832 putative lipoprotein transmembrane
YP_004491025.1	PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: dac:Daci_0831 methionyl-tRNA formyltransferase
YP_004491026.1	PFAM: AzlC-like; KEGG: dac:Daci_0830 AzlC family protein
YP_004491027.1	PFAM: Branched-chain amino acid transport; KEGG: dac:Daci_0829 branched-chain amino acid transport
YP_004491028.1	HAMAP: Phosphoglycerate kinase; KEGG: dac:Daci_0828 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_004491029.1	KEGG: dac:Daci_0827 hypothetical protein
YP_004491030.1	KEGG: dac:Daci_0826 hypothetical protein
YP_004491031.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: dac:Daci_0825 hypothetical protein
YP_004491032.1	TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 2, core; KEGG: dac:Daci_0824 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core
YP_004491033.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0823 LysR family transcriptional regulator
YP_004491034.1	KEGG: dac:Daci_0822 hypothetical protein
YP_004491035.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: dac:Daci_0821 succinylglutamate desuccinylase/aspartoacylase
YP_004491036.1	PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_0820 FAD dependent oxidoreductase
YP_004491037.1	TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: dac:Daci_0819 excinuclease ABC subunit A; PFAM: ABC transporter-like
YP_004491038.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0818 major facilitator transporter
YP_004491039.1	KEGG: dac:Daci_0817 single-strand-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding
YP_004491040.1	KEGG: gpb:HDN1F_10770 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004491041.1	PFAM: HipA-like, C-terminal; HipA-like, N-terminal; KEGG: bam:Bamb_3753 HipA domain-containing protein
YP_004491042.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dac:Daci_0815 sulphate transporter
YP_004491043.1	KEGG: dac:Daci_0816 hypothetical protein
YP_004491044.1	KEGG: pct:PC1_0120 hypothetical protein
YP_004491045.1	TIGRFAM: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: dac:Daci_0814 phenylacetate-CoA oxygenase/reductase subunit PaaK; PFAM: Ferredoxin; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_004491046.1	KEGG: dac:Daci_0813 phenylacetate-CoA oxygenase subunit PaaJ; TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: Protein of unknown function DUF59
YP_004491047.1	KEGG: dac:Daci_0812 phenylacetate-CoA oxygenase subunit PaaI; TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit; PFAM: Phenylacetic acid catabolic
YP_004491048.1	KEGG: dac:Daci_0811 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: Phenylacetic acid degradation B; PFAM: Phenylacetic acid degradation B
YP_004491049.1	KEGG: dac:Daci_0810 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: Phenylacetate-CoA oxygenase, PaaG subunit; PFAM: Phenylacetic acid catabolic
YP_004491050.1	TIGRFAM: Phenylacetate-CoA ligase; KEGG: dac:Daci_0809 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004491051.1	KEGG: dac:Daci_0808 phenylacetic acid degradation protein PaaN; TIGRFAM: Phenylacetic acid degradation protein paaN2; PFAM: Aldehyde dehydrogenase
YP_004491052.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_0807 TetR family transcriptional regulator
YP_004491053.1	KEGG: axy:AXYL_06021 response regulator 18; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004491054.1	KEGG: dac:Daci_0806 histidine kinase; PFAM: ATP-binding region, ATPase-like; Diverse 7TM receptor, transmembrane region; SMART: ATP-binding region, ATPase-like
YP_004491055.1	PFAM: Beta-lactamase-related; KEGG: dac:Daci_0805 beta-lactamase
YP_004491056.1	TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: dac:Daci_0804 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA methyl transferase-like
YP_004491057.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0803 LysR family transcriptional regulator
YP_004491058.1	PFAM: Crotonase, core; KEGG: dac:Daci_0802 enoyl-CoA hydratase
YP_004491059.1	KEGG: dac:Daci_0801 hypothetical protein
YP_004491060.1	KEGG: dac:Daci_0800 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004491061.1	KEGG: dac:Daci_0799 citrate synthase
YP_004491062.1	KEGG: dac:Daci_0798 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004491063.1	KEGG: dac:Daci_0796 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004491064.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0795 LysR family transcriptional regulator
YP_004491065.1	KEGG: dac:Daci_0794 tricarballylate dehydrogenase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobZ, precorrin 3B synthase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal
YP_004491066.1	TIGRFAM: Citrate utilization protein B; KEGG: dac:Daci_0793 CitB domain-containing protein
YP_004491067.1	KEGG: dac:Daci_0792 hypothetical protein
YP_004491068.1	KEGG: dac:Daci_0791 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004491069.1	KEGG: dac:Daci_0790 hypothetical protein
YP_004491070.1	KEGG: dac:Daci_0789 FMN-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004491071.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0788 LysR family transcriptional regulator
YP_004491072.1	SMART: Helix-turn-helix type 3; KEGG: bav:BAV0410 phage repressor protein
YP_004491073.1	KEGG: dac:Daci_0787 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004491074.1	KEGG: dac:Daci_0786 putative ABC transporter periplasmic sugar-binding protein
YP_004491075.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0785 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004491076.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0784 monosaccharide-transporting ATPase
YP_004491077.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_0783 monosaccharide-transporting ATPase
YP_004491078.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: dac:Daci_0782 xylose isomerase domain-containing protein
YP_004491079.1	KEGG: dac:Daci_0781 hypothetical protein
YP_004491080.1	KEGG: dac:Daci_0780 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004491081.1	KEGG: dac:Daci_0779 hypothetical protein
YP_004491082.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0778 LysR family transcriptional regulator
YP_004491083.1	KEGG: dac:Daci_0777 hypothetical protein
YP_004491084.1	PFAM: Protein of unknown function, ATP binding; KEGG: dac:Daci_0776 hypothetical protein
YP_004491086.1	KEGG: dac:Daci_0775 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_004491087.1	KEGG: dac:Daci_0774 beta-lactamase domain-containing protein
YP_004491088.1	TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: dac:Daci_0773 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like
YP_004491089.1	PFAM: HipA-like, N-terminal; HipA-like, C-terminal; KEGG: bch:Bcen2424_5482 HipA domain-containing protein
YP_004491090.1	SMART: Helix-turn-helix type 3; KEGG: bch:Bcen2424_5481 hypothetical protein
YP_004491091.1	KEGG: dac:Daci_0770 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_004491092.1	PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: dac:Daci_0769 anthranilate phosphoribosyltransferase
YP_004491093.1	TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: dac:Daci_0768 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004491094.1	KEGG: dac:Daci_0767 hypothetical protein
YP_004491095.1	KEGG: dac:Daci_0766 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A
YP_004491096.1	PFAM: Toxic anion resistance; KEGG: dac:Daci_0765 toxic anion resistance family protein
YP_004491097.1	KEGG: dac:Daci_0764 hypothetical protein
YP_004491098.1	KEGG: dac:Daci_0763 hypothetical protein
YP_004491099.1	KEGG: dac:Daci_0762 enoyl-(acyl carrier protein) reductase
YP_004491100.1	KEGG: dac:Daci_0761 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004491101.1	PFAM: Secretion protein HlyD; KEGG: dac:Daci_0760 secretion protein HlyD family protein
YP_004491102.1	PFAM: ABC transporter-like; ABC-2 type transporter; KEGG: dac:Daci_0759 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004491103.1	PFAM: ABC-2 type transporter; KEGG: dac:Daci_0758 ABC-2 type transporter
YP_004491104.1	KEGG: dac:Daci_0757 hypothetical protein
YP_004491105.1	KEGG: dac:Daci_0756 hypothetical protein
YP_004491106.1	KEGG: dac:Daci_0755 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; MaoC-like dehydratase
YP_004491107.1	PFAM: Acetate/butyrate kinase; TIGRFAM: Acetate kinase; HAMAP: Acetate kinase; KEGG: dac:Daci_0754 acetate kinase
YP_004491108.1	PFAM: Chorismate mutase, type II; KEGG: dac:Daci_0753 chorismate mutase
YP_004491109.1	TIGRFAM: Anthranilate synthase component I; KEGG: dac:Daci_0752 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_004491110.1	KEGG: dac:Daci_0751 hypothetical protein
YP_004491111.1	KEGG: dac:Daci_0750 hypothetical protein
YP_004491112.1	PFAM: Patatin; KEGG: dac:Daci_0749 patatin
YP_004491113.1	KEGG: dac:Daci_0748 putative lipoprotein transmembrane
YP_004491114.1	KEGG: dac:Daci_0747 histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004491115.1	KEGG: dac:Daci_0746 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004491117.1	KEGG: dac:Daci_0745 hypothetical protein
YP_004491118.1	TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; HAMAP: Spermidine synthase; KEGG: dac:Daci_0744 spermidine synthase; PFAM: Spermine synthase; S-adenosylmethionine decarboxylase, bacterial/archaeal
YP_004491119.1	TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: dac:Daci_0743 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase
YP_004491120.1	KEGG: dac:Daci_0741 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004491121.1	KEGG: dac:Daci_0740 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004491122.1	TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dac:Daci_0739 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region
YP_004491123.1	KEGG: dac:Daci_0738 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004491124.1	KEGG: dac:Daci_0737 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_004491125.1	KEGG: dac:Daci_0736 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004491126.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif
YP_004491127.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: dac:Daci_0734 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004491128.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0733 LysR family transcriptional regulator
YP_004491129.1	KEGG: dac:Daci_0732 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004491130.1	KEGG: dac:Daci_0731 TRAP dicarboxylate transporter subunit DctP; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004491131.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dac:Daci_0730 tripartite ATP-independent periplasmic transporter DctQ
YP_004491132.1	KEGG: dac:Daci_0729 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004491133.1	KEGG: dac:Daci_0728 transketolase domain-containing protein; PFAM: Transketolase, N-terminal
YP_004491134.1	KEGG: dac:Daci_0727 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004491135.1	KEGG: dac:Daci_0726 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004491136.1	PFAM: Sel1-like; KEGG: dac:Daci_0725 Sel1 domain-containing protein
YP_004491137.1	KEGG: dac:Daci_0724 porin
YP_004491138.1	KEGG: dac:Daci_0723 hypothetical protein
YP_004491139.1	TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: dac:Daci_0722 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase
YP_004491140.1	KEGG: dac:Daci_0721 ApaG protein; HAMAP: Protein ApaG; PFAM: ApaG
YP_004491141.1	PFAM: Site-specific recombinase Gcr; KEGG: dac:Daci_0720 putative site-specific recombinase transmembrane protein
YP_004491142.1	PFAM: Cation/H+ exchanger; KEGG: dac:Daci_0719 sodium/hydrogen exchanger
YP_004491143.1	TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase ybdK; KEGG: dac:Daci_0718 carboxylate-amine ligase; PFAM: Glutamate--cysteine ligase, GCS2
YP_004491144.1	KEGG: dac:Daci_0716 hypothetical protein
YP_004491145.1	KEGG: dac:Daci_0715 hypothetical protein
YP_004491146.1	KEGG: dac:Daci_0714 hypothetical protein
YP_004491147.1	PFAM: Protein of unknown function DUF1446; KEGG: dac:Daci_0713 hypothetical protein
YP_004491148.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0712 LysR family transcriptional regulator
YP_004491149.1	TIGRFAM: Thiamine-monophosphate kinase; KEGG: dac:Daci_0711 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_004491150.1	TIGRFAM: Conserved hypothetical protein CHP02231; KEGG: dac:Daci_0710 hypothetical protein
YP_004491151.1	KEGG: dac:Daci_0709 phosphatidylglycerophosphatase A; manually curated; PFAM: Phosphatidylglycerophosphatase A
YP_004491152.1	KEGG: dac:Daci_0708 CinA domain-containing protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal
YP_004491153.1	KEGG: dac:Daci_0707 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004491154.1	KEGG: dac:Daci_0706 YecA family protein; TIGRFAM: YgfB/YecA protein; PFAM: SEC-C motif
YP_004491155.1	KEGG: dac:Daci_0697 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_004491156.1	KEGG: dac:Daci_0696 AMP-dependent synthetase/ligase; PFAM: AMP-dependent synthetase/ligase
YP_004491157.1	KEGG: dac:Daci_0695 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004491158.1	KEGG: dac:Daci_0694 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004491159.1	KEGG: dac:Daci_0693 hypothetical protein
YP_004491160.1	KEGG: dac:Daci_0692 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004491161.1	KEGG: dac:Daci_0691 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004491162.1	KEGG: dac:Daci_0690 hypothetical protein
YP_004491163.1	KEGG: dac:Daci_0689 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004491164.1	KEGG: dac:Daci_0688 hypothetical protein
YP_004491165.1	KEGG: dac:Daci_0687 ferredoxin; PFAM: Ferredoxin; Cytochrome P450; Oxidoreductase FAD-binding region
YP_004491166.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_0686 GCN5-related N-acetyltransferase
YP_004491167.1	KEGG: pfs:PFLU1042 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004491168.1	PFAM: FecR protein; KEGG: mms:mma_2023 Fe2+-dicitrate sensor, membrane component
YP_004491169.1	KEGG: ppg:PputGB1_0692 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal
YP_004491170.1	PFAM: Small multidrug resistance protein; KEGG: dac:Daci_0685 small multidrug resistance protein
YP_004491171.1	TIGRFAM: Protein of unknown function DUF132; KEGG: dac:Daci_0684 PilT domain-containing protein
YP_004491172.1	KEGG: dac:Daci_0683 putative RNA methylase; PFAM: Putative RNA methylase; THUMP
YP_004491173.1	KEGG: dac:Daci_0682 ornithine cyclodeaminase; PFAM: Ornithine cyclodeaminase/mu-crystallin
YP_004491174.1	TIGRFAM: Arginase, subgroup; KEGG: dac:Daci_0681 arginase; PFAM: Ureohydrolase
YP_004491175.1	TIGRFAM: RNA 3'-terminal phosphate cyclase, subgroup; KEGG: dac:Daci_0680 RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase-like
YP_004491176.1	PFAM: Nucleotidyltransferase, predicted; KEGG: dac:Daci_0679 nucleotidyltransferase-like protein
YP_004491177.1	PFAM: Uncharacterised protein family UPF0027; KEGG: dac:Daci_0678 hypothetical protein
YP_004491178.1	KEGG: dac:Daci_0677 hypothetical protein
YP_004491179.1	KEGG: dac:Daci_0676 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_004491180.1	KEGG: dac:Daci_0675 regulator of RNA terminal phosphate cyclase; PFAM: Regulator of RNA terminal phosphate cyclase; RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core
YP_004491181.1	KEGG: dac:Daci_0674 RNA polymerase sigma 54 subunit RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54
YP_004491182.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0673 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004491183.1	KEGG: dac:Daci_0672 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA-like protein
YP_004491184.1	PFAM: DSBA oxidoreductase; KEGG: dac:Daci_0671 DsbA oxidoreductase
YP_004491185.1	PFAM: Sporulation/cell division region, bacteria; KEGG: dac:Daci_0670 sporulation domain-containing protein
YP_004491186.1	TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: dac:Daci_0669 arginyl-tRNA synthetase
YP_004491187.1	PFAM: Protein of unknown function DUF2214, membrane; KEGG: dac:Daci_0668 putative transmembrane protein
YP_004491188.1	KEGG: dac:Daci_0667 hypothetical protein
YP_004491189.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0666 LysR family transcriptional regulator
YP_004491190.1	PFAM: Malate synthase-like, core; TIGRFAM: Malate synthase G; HAMAP: Malate synthase G; KEGG: dac:Daci_0665 malate synthase G
YP_004491191.1	KEGG: dac:Daci_0664 hypothetical protein
YP_004491192.1	KEGG: dac:Daci_0663 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase, subgroup; PFAM: 4-oxalocrotonate tautomerase
YP_004491193.1	KEGG: dac:Daci_0662 hypothetical protein
YP_004491194.1	KEGG: dac:Daci_0661 class II glutamine amidotransferase; manually curated; PFAM: Glutamine amidotransferase, class-II
YP_004491195.1	PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: dac:Daci_5994 glutathione synthetase
YP_004491196.1	KEGG: dac:Daci_5995 benzoate transporter; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein
YP_004491197.1	KEGG: dac:Daci_5996 K potassium transporter; HAMAP: Low affinity potassium transport system protein kup; PFAM: K+ potassium transporter
YP_004491198.1	KEGG: dac:Daci_5997 glutamate--cysteine ligase; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA
YP_004491199.1	PFAM: Cation transporter; KEGG: dac:Daci_5998 cation transporter
YP_004491200.1	PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: dac:Daci_5999 potassium transporter peripheral membrane component
YP_004491201.1	TIGRFAM: Gamma-glutamyl phosphate reductase GPR; KEGG: dac:Daci_6000 gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase
YP_004491202.1	KEGG: ctt:CtCNB1_4563 hypothetical protein
YP_004491203.1	KEGG: dac:Daci_6001 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta
YP_004491204.1	PFAM: Rare lipoprotein B; KEGG: dac:Daci_6002 rare lipoprotein B
YP_004491205.1	TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: dac:Daci_6003 leucyl-tRNA synthetase
YP_004491206.1	PFAM: Mechanosensitive ion channel MscS; KEGG: dac:Daci_6004 MscS mechanosensitive ion channel
YP_004491207.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dac:Daci_6005 biopolymer transport protein ExbD/TolR
YP_004491208.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dac:Daci_6006 MotA/TolQ/ExbB proton channel
YP_004491209.1	TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: dac:Daci_6007 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase
YP_004491210.1	KEGG: dac:Daci_6008 SmpA/OmlA domain-containing protein; manually curated; PFAM: SmpA/OmlA
YP_004491211.1	PFAM: Ferric-uptake regulator; KEGG: dac:Daci_6009 ferric uptake regulator family protein
YP_004491212.1	PFAM: Protein of unknown function DUF1800; KEGG: dac:Daci_6010 hypothetical protein
YP_004491213.1	PFAM: Protein of unknown function DUF1501; KEGG: dac:Daci_6011 hypothetical protein
YP_004491214.1	KEGG: dac:Daci_6012 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004491215.1	PFAM: NUDIX hydrolase domain; KEGG: dac:Daci_6013 NUDIX hydrolase
YP_004491216.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_6014 GCN5-related N-acetyltransferase
YP_004491217.1	KEGG: dac:Daci_6015 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region
YP_004491218.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; MHYT; PAS fold; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: dac:Daci_6017 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region
YP_004491219.1	PFAM: Protein of unknown function DUF2061, membrane; KEGG: dac:Daci_6018 hypothetical protein
YP_004491220.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_6019 LysR family transcriptional regulator
YP_004491221.1	KEGG: dac:Daci_6020 beta alanine--pyruvate transaminase; PFAM: Aminotransferase class-III
YP_004491222.1	KEGG: dac:Daci_6021 hypothetical protein
YP_004491223.1	KEGG: dac:Daci_6022 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004491224.1	KEGG: dac:Daci_6023 branched chain amino acid ABC transporter periplasmic ligand-binding protein
YP_004491225.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_6024 inner-membrane translocator
YP_004491226.1	PFAM: Bacterial inner-membrane translocator; KEGG: dac:Daci_6025 inner-membrane translocator
YP_004491227.1	PFAM: ABC transporter-like; KEGG: dac:Daci_6026 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004491228.1	PFAM: ABC transporter-like; KEGG: dac:Daci_6027 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004491229.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: dac:Daci_6028 amidase; PFAM: Peptidase M20
YP_004491230.1	PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; KEGG: dac:Daci_6029 MlrC domain-containing protein
YP_004491231.1	PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; KEGG: dac:Daci_6030 malic enzyme
YP_004491232.1	PFAM: Guanine-specific ribonuclease N1/T1; KEGG: dac:Daci_6031 guanine-specific ribonuclease N1 and T1
YP_004491233.1	PFAM: Barstar (barnase inhibitor); KEGG: dac:Daci_6032 hypothetical protein
YP_004491234.1	SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: dac:Daci_6033 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase
YP_004491235.1	KEGG: dac:Daci_6034 SurA domain-containing protein; HAMAP: Chaperone surA; PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type
YP_004491236.1	KEGG: dac:Daci_6035 organic solvent tolerance protein; HAMAP: LPS-assembly protein lptD; PFAM: Organic solvent tolerance protein
YP_004491237.1	PFAM: Aminoglycoside phosphotransferase; KEGG: dac:Daci_6036 aminoglycoside phosphotransferase
YP_004491238.1	KEGG: dac:Daci_6037 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E
YP_004491239.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_6038 alpha/beta hydrolase fold protein
YP_004491240.1	PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: dac:Daci_6039 peptidase M20
YP_004491241.1	manually curated; PFAM: HTH transcriptional regulator, MerR; KEGG: dac:Daci_6040 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004491242.1	PFAM: Flavodoxin-like fold; KEGG: dac:Daci_6041 NAD(P)H dehydrogenase
YP_004491243.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: dac:Daci_6042 glycerophosphoryl diester phosphodiesterase
YP_004491244.1	KEGG: dac:Daci_6043 methionine biosynthesis protein MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW
YP_004491245.1	PFAM: Alpha/beta hydrolase fold-1; TIGRFAM: Homoserine O-acetyltransferase; HAMAP: Homoserine O-acetyltransferase; KEGG: dac:Daci_6044 homoserine O-acetyltransferase
YP_004491246.1	PFAM: Uncharacterised protein family UPF0016; KEGG: dac:Daci_6045 hypothetical protein
YP_004491247.1	KEGG: dac:Daci_6046 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1
YP_004491248.1	KEGG: dac:Daci_6047 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1
YP_004491249.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_6048 short chain dehydrogenase
YP_004491250.1	PFAM: Protein of unknown function DUF1239; KEGG: dac:Daci_6049 hypothetical protein
YP_004491251.1	KEGG: dac:Daci_6050 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; TIGRFAM: Phosphatase KdsC
YP_004491252.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: dac:Daci_6051 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core
YP_004491253.1	KEGG: dac:Daci_6052 adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase
YP_004491254.1	KEGG: dac:Daci_6053 hypothetical protein
YP_004491255.1	KEGG: dac:Daci_6054 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004491256.1	TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: dac:Daci_6055 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related
YP_004491257.1	TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: dac:Daci_6056 60 kDa inner membrane insertion protein; PFAM: Membrane insertion protein, OxaA/YidC
YP_004491258.1	KEGG: dac:Daci_6057 hypothetical protein; TIGRFAM: Protein of unknown function DUF37; PFAM: Protein of unknown function DUF37
YP_004491259.1	KEGG: dac:Daci_6058 hypothetical protein
YP_004491260.1	KEGG: dac:Daci_6059 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; PFAM: Ribosomal protein L34