-- dump date 20140619_055834 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_307196.1 73747957 3623177 261..1595 1 NC_007356.1 chromosome replication initiator DnaA 1595 dnaA 3623177 dnaA Dehalococcoides mccartyi CBDB1 chromosome replication initiator DnaA YP_307196.1 261 D 255470 CDS YP_307197.1 73747958 3623697 1926..3200 1 NC_007356.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3200 obgE 3623697 obgE Dehalococcoides mccartyi CBDB1 GTPase ObgE YP_307197.1 1926 D 255470 CDS YP_307198.1 73747959 3623767 3188..3802 1 NC_007356.1 nicotinate (nicotinamide) nucleotideadenylyltransferase 3802 nadD 3623767 nadD Dehalococcoides mccartyi CBDB1 nicotinate (nicotinamide) nucleotideadenylyltransferase YP_307198.1 3188 D 255470 CDS YP_307199.1 73747960 3623614 complement(3884..5812) 1 NC_007356.1 DNA gyrase subunit B 5812 gyrB 3623614 gyrB Dehalococcoides mccartyi CBDB1 DNA gyrase subunit B YP_307199.1 3884 R 255470 CDS YP_307200.1 73747961 3623410 complement(6017..8203) 1 NC_007356.1 GTP pyrophosphokinase 8203 relA 3623410 relA Dehalococcoides mccartyi CBDB1 GTP pyrophosphokinase YP_307200.1 6017 R 255470 CDS YP_307201.1 73747962 3623900 8331..9587 1 NC_007356.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 9587 hisS 3623900 hisS Dehalococcoides mccartyi CBDB1 histidyl-tRNA synthetase YP_307201.1 8331 D 255470 CDS YP_307202.1 73747963 3623097 9584..10747 1 NC_007356.1 hypothetical protein 10747 3623097 cbdb_A9 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307202.1 9584 D 255470 CDS YP_307203.1 73747964 3623436 complement(10744..11367) 1 NC_007356.1 hypothetical protein 11367 3623436 cbdb_A10 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307203.1 10744 R 255470 CDS YP_307204.1 73747965 3623333 complement(11400..12320) 1 NC_007356.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 12320 ilvE 3623333 ilvE Dehalococcoides mccartyi CBDB1 branched-chain amino acid aminotransferase YP_307204.1 11400 R 255470 CDS YP_307205.1 73747966 3623176 complement(12474..13646) 1 NC_007356.1 DNA polymerase IV 13646 dinB 3623176 dinB Dehalococcoides mccartyi CBDB1 DNA polymerase IV YP_307205.1 12474 R 255470 CDS YP_307206.1 73747967 3622986 complement(13646..13834) 1 NC_007356.1 hypothetical protein 13834 3622986 cbdb_A13 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307206.1 13646 R 255470 CDS YP_307207.1 73747968 3623676 complement(13905..14717) 1 NC_007356.1 orotidine 5'-phosphate decarboxylase 14717 pyrF 3623676 pyrF Dehalococcoides mccartyi CBDB1 orotidine 5'-phosphate decarboxylase YP_307207.1 13905 R 255470 CDS YP_307208.1 73747969 3623851 14864..15559 1 NC_007356.1 hypothetical protein 15559 3623851 cbdb_A15 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307208.1 14864 D 255470 CDS YP_307209.1 73747970 3623198 15598..16392 1 NC_007356.1 lipoprotein 16392 3623198 cbdb_A17 Dehalococcoides mccartyi CBDB1 lipoprotein YP_307209.1 15598 D 255470 CDS YP_307210.1 73747971 3622834 16438..17754 1 NC_007356.1 folylpolyglutamate synthetase 17754 folC 3622834 folC Dehalococcoides mccartyi CBDB1 folylpolyglutamate synthetase YP_307210.1 16438 D 255470 CDS YP_307211.1 73747972 3624070 complement(17737..17952) 1 NC_007356.1 hypothetical protein 17952 3624070 cbdb_A19 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307211.1 17737 R 255470 CDS YP_307212.1 73747973 3624075 complement(17966..18229) 1 NC_007356.1 hypothetical protein 18229 3624075 cbdb_A20 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307212.1 17966 R 255470 CDS YP_307213.1 73747974 3623185 18532..18993 1 NC_007356.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 18993 dtd 3623185 dtd Dehalococcoides mccartyi CBDB1 D-tyrosyl-tRNA(Tyr) deacylase YP_307213.1 18532 D 255470 CDS YP_307214.1 73747975 3624097 19045..19473 1 NC_007356.1 FUR family transcriptional regulator 19473 3624097 cbdb_A24 Dehalococcoides mccartyi CBDB1 FUR family transcriptional regulator YP_307214.1 19045 D 255470 CDS YP_307215.1 73747976 3624104 complement(19527..20279) 1 NC_007356.1 hypothetical protein 20279 3624104 cbdb_A26 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307215.1 19527 R 255470 CDS YP_307216.1 73747977 3624100 20382..20768 1 NC_007356.1 hypothetical protein 20768 3624100 cbdb_A25 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307216.1 20382 D 255470 CDS YP_307217.1 73747978 3623912 complement(20850..20990) 1 NC_007356.1 hypothetical protein 20990 3623912 cbdb_A27 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307217.1 20850 R 255470 CDS YP_307218.1 73747979 3623161 complement(21047..23437) 1 NC_007356.1 DNA internalization-related competence protein,ComEC 23437 comeC 3623161 comeC Dehalococcoides mccartyi CBDB1 DNA internalization-related competence protein,ComEC YP_307218.1 21047 R 255470 CDS YP_307219.1 73747980 3623160 complement(23434..24087) 1 NC_007356.1 competence protein ComEA 24087 comeA 3623160 comeA Dehalococcoides mccartyi CBDB1 competence protein ComEA YP_307219.1 23434 R 255470 CDS YP_307220.1 73747981 3623932 complement(24111..24776) 1 NC_007356.1 potassium uptake protein, TrkA-like protein 24776 3623932 cbdb_A32 Dehalococcoides mccartyi CBDB1 potassium uptake protein, TrkA-like protein YP_307220.1 24111 R 255470 CDS YP_307221.1 73747982 3623936 complement(24781..25185) 1 NC_007356.1 potassium uptake protein, fragment 25185 3623936 cbdb_A33 Dehalococcoides mccartyi CBDB1 potassium uptake protein, fragment YP_307221.1 24781 R 255470 CDS YP_307222.1 73747983 3623939 complement(25189..25617) 1 NC_007356.1 universal stress family protein 25617 3623939 cbdb_A34 Dehalococcoides mccartyi CBDB1 universal stress family protein YP_307222.1 25189 R 255470 CDS YP_307223.1 73747984 3624029 complement(25694..27139) 1 NC_007356.1 Trk system potassium uptake protein 27139 trkH 3624029 trkH Dehalococcoides mccartyi CBDB1 Trk system potassium uptake protein YP_307223.1 25694 R 255470 CDS YP_307224.1 73747985 3623956 complement(27143..28507) 1 NC_007356.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 28507 trkA 3623956 trkA Dehalococcoides mccartyi CBDB1 potassium transporter peripheral membrane protein YP_307224.1 27143 R 255470 CDS YP_307225.1 73747986 3622953 complement(28511..28663) 1 NC_007356.1 hypothetical protein 28663 3622953 cbdb_B1 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307225.1 28511 R 255470 CDS YP_307226.1 73747987 3622663 complement(28795..29745) 1 NC_007356.1 cation efflux family protein 29745 3622663 cbdb_A39 Dehalococcoides mccartyi CBDB1 cation efflux family protein YP_307226.1 28795 R 255470 CDS YP_307227.1 73747988 3622667 29889..30518 1 NC_007356.1 hypothetical protein 30518 3622667 cbdb_A40 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307227.1 29889 D 255470 CDS YP_307228.1 73747989 3622674 30511..31512 1 NC_007356.1 phosphate transporter 31512 3622674 cbdb_A41 Dehalococcoides mccartyi CBDB1 phosphate transporter YP_307228.1 30511 D 255470 CDS YP_307229.1 73747990 3623609 complement(31509..32129) 1 NC_007356.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 32129 gmk 3623609 gmk Dehalococcoides mccartyi CBDB1 guanylate kinase YP_307229.1 31509 R 255470 CDS YP_307230.1 73747991 3622684 complement(32107..32397) 1 NC_007356.1 hypothetical protein 32397 3622684 cbdb_A43 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307230.1 32107 R 255470 CDS YP_307231.1 73747992 3622686 32606..33454 1 NC_007356.1 ferredoxin-NADP reductase 33454 3622686 cbdb_A45 Dehalococcoides mccartyi CBDB1 ferredoxin-NADP reductase YP_307231.1 32606 D 255470 CDS YP_307232.1 73747993 3623604 33447..34844 1 NC_007356.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 34844 gltA 3623604 gltA Dehalococcoides mccartyi CBDB1 oxidoreductase YP_307232.1 33447 D 255470 CDS YP_307233.1 73747994 3622693 complement(34841..35053) 1 NC_007356.1 hypothetical protein 35053 3622693 cbdb_A48 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307233.1 34841 R 255470 CDS YP_307234.1 73747995 3622705 complement(35163..35696) 1 NC_007356.1 hypothetical protein 35696 3622705 cbdb_A50 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307234.1 35163 R 255470 CDS YP_307235.1 73747996 3622714 complement(35767..36375) 1 NC_007356.1 SAM-dependent methyltransferase 36375 3622714 cbdb_A52 Dehalococcoides mccartyi CBDB1 SAM-dependent methyltransferase YP_307235.1 35767 R 255470 CDS YP_307236.1 73747997 3622722 complement(36386..36580) 1 NC_007356.1 hypothetical protein 36580 3622722 cbdb_A54 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307236.1 36386 R 255470 CDS YP_307237.1 73747998 3622728 36722..37093 1 NC_007356.1 hypothetical protein 37093 3622728 cbdb_A55 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307237.1 36722 D 255470 CDS YP_307238.1 73747999 3622733 37229..37675 1 NC_007356.1 redox family protein 37675 3622733 cbdb_A56 Dehalococcoides mccartyi CBDB1 redox family protein YP_307238.1 37229 D 255470 CDS YP_307239.1 73748000 3622745 complement(37672..38775) 1 NC_007356.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 38775 3622745 cbdb_A58 Dehalococcoides mccartyi CBDB1 GTP-dependent nucleic acid-binding protein EngD YP_307239.1 37672 R 255470 CDS YP_307240.1 73748001 3622748 complement(38797..39039) 1 NC_007356.1 hypothetical protein 39039 3622748 cbdb_A59 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307240.1 38797 R 255470 CDS YP_307241.1 73748002 3623902 39161..40195 1 NC_007356.1 DNA polymerase III delta subunit-like protein 40195 holA 3623902 holA Dehalococcoides mccartyi CBDB1 DNA polymerase III delta subunit-like protein YP_307241.1 39161 D 255470 CDS YP_307242.1 73748003 3622789 40197..40808 1 NC_007356.1 hypothetical protein 40808 3622789 cbdb_A62 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307242.1 40197 D 255470 CDS YP_307243.1 73748004 3622796 40843..41850 1 NC_007356.1 transcriptional repressor, ROK family 41850 3622796 cbdb_A63 Dehalococcoides mccartyi CBDB1 transcriptional repressor, ROK family YP_307243.1 40843 D 255470 CDS YP_307244.1 73748005 3623265 41966..44581 1 NC_007356.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 44581 alaS 3623265 alaS Dehalococcoides mccartyi CBDB1 alanyl-tRNA synthetase YP_307244.1 41966 D 255470 CDS YP_307245.1 73748006 3622809 44628..45029 1 NC_007356.1 hypothetical protein 45029 3622809 cbdb_A67 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307245.1 44628 D 255470 CDS YP_307246.1 73748007 3622864 45051..46229 1 NC_007356.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 46229 tgt 3622864 tgt Dehalococcoides mccartyi CBDB1 queuine tRNA-ribosyltransferase YP_307246.1 45051 D 255470 CDS YP_307247.1 73748008 3622816 46324..47466 1 NC_007356.1 iron-containing alcohol dehydrogenase 47466 3622816 cbdb_A69 Dehalococcoides mccartyi CBDB1 iron-containing alcohol dehydrogenase YP_307247.1 46324 D 255470 CDS YP_307248.1 73748009 3623653 51080..53554 1 NC_007356.1 ATP-dependent Clp protease, ATP-binding subunit 53554 clpC 3623653 clpC Dehalococcoides mccartyi CBDB1 ATP-dependent Clp protease, ATP-binding subunit YP_307248.1 51080 D 255470 CDS YP_307249.1 73748010 3623211 53999..55393 1 NC_007356.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 55393 radA 3623211 radA Dehalococcoides mccartyi CBDB1 DNA repair protein RadA YP_307249.1 53999 D 255470 CDS YP_307250.1 73748011 3623990 55380..56063 1 NC_007356.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 56063 ispD 3623990 ispD Dehalococcoides mccartyi CBDB1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_307250.1 55380 D 255470 CDS YP_307251.1 73748012 3623992 56069..56542 1 NC_007356.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 56542 ispF 3623992 ispF Dehalococcoides mccartyi CBDB1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_307251.1 56069 D 255470 CDS YP_307252.1 73748013 3623169 56546..57919 1 NC_007356.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 57919 cysS 3623169 cysS Dehalococcoides mccartyi CBDB1 cysteinyl-tRNA synthetase YP_307252.1 56546 D 255470 CDS YP_307253.1 73748014 3622961 complement(58013..58810) 1 NC_007356.1 recombinase 58810 3622961 cbdb_B2 Dehalococcoides mccartyi CBDB1 recombinase YP_307253.1 58013 R 255470 CDS YP_307254.1 73748015 3623113 complement(58960..59667) 1 NC_007356.1 DNA-binding response regulator 59667 rdhD 3623113 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_307254.1 58960 R 255470 CDS YP_307255.1 73748016 3623868 complement(59661..61328) 1 NC_007356.1 sensor histidine kinase 61328 rdhC 3623868 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307255.1 59661 R 255470 CDS YP_307256.1 73748017 3623480 61449..62939 1 NC_007356.1 reductive dehalogenase 62939 rdhA 3623480 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_307256.1 61449 D 255470 CDS YP_307257.1 73748018 3623832 62977..63279 1 NC_007356.1 reductive dehalogenase anchoring protein 63279 rdhB 3623832 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_307257.1 62977 D 255470 CDS YP_307258.1 73748019 3623122 64108..64872 1 NC_007356.1 hypothetical protein 64872 rdhF 3623122 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307258.1 64108 D 255470 CDS YP_307259.1 73748020 3623869 65088..66593 1 NC_007356.1 sensor histidine kinase 66593 rdhC 3623869 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307259.1 65088 D 255470 CDS YP_307260.1 73748021 3623114 66580..67281 1 NC_007356.1 DNA-binding response regulator 67281 rdhD 3623114 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_307260.1 66580 D 255470 CDS YP_307261.1 73748022 3623481 67523..68989 1 NC_007356.1 reductive dehalogenase 68989 rdhA 3623481 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_307261.1 67523 D 255470 CDS YP_307262.1 73748023 3623831 69010..69282 1 NC_007356.1 reductive dehalogenase anchoring protein 69282 rdhB 3623831 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_307262.1 69010 D 255470 CDS YP_307263.1 73748024 3622890 70199..71053 1 NC_007356.1 hypothetical protein 71053 3622890 cbdb_A86 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307263.1 70199 D 255470 CDS YP_307264.1 73748025 3623123 complement(71328..72092) 1 NC_007356.1 hypothetical protein 72092 rdhF 3623123 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307264.1 71328 R 255470 CDS YP_307265.1 73748026 3623834 complement(72179..72475) 1 NC_007356.1 reductive dehalogenase anchoring protein 72475 rdhB 3623834 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_307265.1 72179 R 255470 CDS YP_307266.1 73748027 3623482 complement(72513..74060) 1 NC_007356.1 reductive dehalogenase 74060 rdhA 3623482 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_307266.1 72513 R 255470 CDS YP_307267.1 73748028 3623418 complement(74171..75037) 1 NC_007356.1 hypothetical protein 75037 rdhH 3623418 rdhH Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307267.1 74171 R 255470 CDS YP_307268.1 73748029 3623115 complement(75349..76032) 1 NC_007356.1 DNA-binding response regulato 76032 rdhD 3623115 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulato YP_307268.1 75349 R 255470 CDS YP_307269.1 73748030 3623870 complement(76013..77239) 1 NC_007356.1 sensor histidine kinase 77239 rdhC 3623870 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307269.1 76013 R 255470 CDS YP_307270.1 73748031 3623110 complement(77336..78820) 1 NC_007356.1 radical SAM protein 78820 3623110 cbdb_A92 Dehalococcoides mccartyi CBDB1 radical SAM protein YP_307270.1 77336 R 255470 CDS YP_307271.1 73748032 3623427 complement(78843..79592) 1 NC_007356.1 radical SAM domain-containing protein 79592 rdhI 3623427 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_307271.1 78843 R 255470 CDS YP_307272.1 73748033 3623419 complement(79589..80335) 1 NC_007356.1 hypothetical protein 80335 rdhH 3623419 rdhH Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307272.1 79589 R 255470 CDS YP_307273.1 73748034 3623836 complement(80419..80688) 1 NC_007356.1 reductive dehalogenase anchoring protein 80688 rdhB 3623836 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_307273.1 80419 R 255470 CDS YP_307274.1 73748035 3623483 complement(80710..82230) 1 NC_007356.1 reductive dehalogenase 82230 rdhA 3623483 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_307274.1 80710 R 255470 CDS YP_307275.1 73748036 3623129 complement(82305..82928) 1 NC_007356.1 hypothetical protein 82928 rdhG 3623129 rdhG Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307275.1 82305 R 255470 CDS YP_307276.1 73748037 3622938 82995..83891 1 NC_007356.1 sensor histidin kinase PAS domain-containing protein 83891 3622938 cbdb_A98 Dehalococcoides mccartyi CBDB1 sensor histidin kinase PAS domain-containing protein YP_307276.1 82995 D 255470 CDS YP_307277.1 73748038 3622945 83908..84186 1 NC_007356.1 sensor histidin kinase ATP-binding subunit 84186 3622945 cbdb_A99 Dehalococcoides mccartyi CBDB1 sensor histidin kinase ATP-binding subunit YP_307277.1 83908 D 255470 CDS YP_307278.1 73748039 3623872 84186..84872 1 NC_007356.1 LuxR family transcriptional regulator 84872 rdhD 3623872 rdhD Dehalococcoides mccartyi CBDB1 LuxR family transcriptional regulator YP_307278.1 84186 D 255470 CDS YP_307279.1 73748040 3623083 85242..85613 1 NC_007356.1 hypothetical protein 85613 3623083 cbdb_B6 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307279.1 85242 D 255470 CDS YP_307280.1 73748041 3623628 85610..86506 1 NC_007356.1 hypothetical protein 86506 3623628 cbdb_A101 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307280.1 85610 D 255470 CDS YP_307281.1 73748042 3623633 86503..88887 1 NC_007356.1 hypothetical protein 88887 3623633 cbdb_A102 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307281.1 86503 D 255470 CDS YP_307282.1 73748043 3623639 89251..90405 1 NC_007356.1 hypothetical protein 90405 3623639 cbdb_A103 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307282.1 89251 D 255470 CDS YP_307283.1 73748044 3623084 90541..90774 1 NC_007356.1 hypothetical protein 90774 3623084 cbdb_B7 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307283.1 90541 D 255470 CDS YP_307284.1 73748045 3623560 90777..92714 1 NC_007356.1 type I restriction-modification system methylation subunit 92714 3623560 cbdb_A104 Dehalococcoides mccartyi CBDB1 type I restriction-modification system methylation subunit YP_307284.1 90777 D 255470 CDS YP_307285.1 73748046 3623568 92701..93369 1 NC_007356.1 type I restriction enzyme, specificity protein 93369 3623568 cbdb_A105 Dehalococcoides mccartyi CBDB1 type I restriction enzyme, specificity protein YP_307285.1 92701 D 255470 CDS YP_307286.1 73748047 3623574 93366..96350 1 NC_007356.1 restriction enzyme type I helicase subunit 96350 3623574 cbdb_A106 Dehalococcoides mccartyi CBDB1 restriction enzyme type I helicase subunit YP_307286.1 93366 D 255470 CDS YP_307287.1 73748048 3623578 96347..97090 1 NC_007356.1 zinc protease 97090 3623578 cbdb_A107 Dehalococcoides mccartyi CBDB1 zinc protease YP_307287.1 96347 D 255470 CDS YP_307288.1 73748049 3623587 97184..100285 1 NC_007356.1 helicase 100285 3623587 cbdb_A108 Dehalococcoides mccartyi CBDB1 helicase YP_307288.1 97184 D 255470 CDS YP_307289.1 73748050 3622872 100287..103358 1 NC_007356.1 hypothetical protein 103358 3622872 cbdb_A109 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307289.1 100287 D 255470 CDS YP_307290.1 73748051 3622879 103391..107662 1 NC_007356.1 atp-dependent exoDNAse, exonuclease v 107662 3622879 cbdb_A111 Dehalococcoides mccartyi CBDB1 atp-dependent exoDNAse, exonuclease v YP_307290.1 103391 D 255470 CDS YP_307291.1 73748052 3622883 complement(108042..108350) 1 NC_007356.1 hypothetical protein 108350 3622883 cbdb_A113 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307291.1 108042 R 255470 CDS YP_307292.1 73748053 3623755 complement(108539..109684) 1 NC_007356.1 molybdopterin-guanine dinucleotide biosynthesis protein A 109684 mobA 3623755 mobA Dehalococcoides mccartyi CBDB1 molybdopterin-guanine dinucleotide biosynthesis protein A YP_307292.1 108539 R 255470 CDS YP_307293.1 73748054 3623345 complement(109685..110374) 1 NC_007356.1 hypothetical protein 110374 3623345 cbdb_A116 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307293.1 109685 R 255470 CDS YP_307294.1 73748055 3624113 complement(110397..113609) 1 NC_007356.1 molybdopterin oxidoreductase 113609 3624113 cbdb_A118 Dehalococcoides mccartyi CBDB1 molybdopterin oxidoreductase YP_307294.1 110397 R 255470 CDS YP_307295.1 73748056 3624122 complement(113602..114783) 1 NC_007356.1 molybdopterin oxidoreductase, membrane subunit 114783 3624122 cbdb_A120 Dehalococcoides mccartyi CBDB1 molybdopterin oxidoreductase, membrane subunit YP_307295.1 113602 R 255470 CDS YP_307296.1 73748057 3624125 complement(114804..115742) 1 NC_007356.1 molybdopterin oxidoreductase, iron-sulfur binding subunit 115742 3624125 cbdb_A121 Dehalococcoides mccartyi CBDB1 molybdopterin oxidoreductase, iron-sulfur binding subunit YP_307296.1 114804 R 255470 CDS YP_307297.1 73748058 3624130 116223..117209 1 NC_007356.1 mrp family protein 117209 3624130 cbdb_A122 Dehalococcoides mccartyi CBDB1 mrp family protein YP_307297.1 116223 D 255470 CDS YP_307298.1 73748059 3623351 complement(117327..117692) 1 NC_007356.1 hypothetical protein 117692 3623351 cbdb_A123 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307298.1 117327 R 255470 CDS YP_307299.1 73748060 3624016 complement(117838..118677) 1 NC_007356.1 degV family protein 118677 3624016 cbdb_A124 Dehalococcoides mccartyi CBDB1 degV family protein YP_307299.1 117838 R 255470 CDS YP_307300.1 73748061 3624052 118876..120180 1 NC_007356.1 hypothetical protein 120180 3624052 cbdb_A126 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307300.1 118876 D 255470 CDS YP_307301.1 73748062 3624059 120243..122162 1 NC_007356.1 endonuclease 122162 3624059 cbdb_A127 Dehalococcoides mccartyi CBDB1 endonuclease YP_307301.1 120243 D 255470 CDS YP_307302.1 73748063 3623904 complement(122229..122711) 1 NC_007356.1 Ni/Fe hydrogenase maturation protease 122711 hoxM 3623904 hoxM Dehalococcoides mccartyi CBDB1 Ni/Fe hydrogenase maturation protease YP_307302.1 122229 R 255470 CDS YP_307303.1 73748064 3622753 complement(122714..124294) 1 NC_007356.1 Ni/Fe hydrogenase large subunit 124294 hupL 3622753 hupL Dehalococcoides mccartyi CBDB1 Ni/Fe hydrogenase large subunit YP_307303.1 122714 R 255470 CDS YP_307304.1 73748065 3622754 complement(124325..125389) 1 NC_007356.1 Ni/Fe hydrogenase small subunit 125389 hupS 3622754 hupS Dehalococcoides mccartyi CBDB1 Ni/Fe hydrogenase small subunit YP_307304.1 124325 R 255470 CDS YP_307305.1 73748066 3623015 complement(125442..126245) 1 NC_007356.1 Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit 126245 3623015 cbdb_A131 Dehalococcoides mccartyi CBDB1 Ni/Fe hydrogenase, iron-sulfur cluster-binding subunit YP_307305.1 125442 R 255470 CDS YP_307306.1 73748067 3623028 complement(126922..127995) 1 NC_007356.1 ABC transporter permease 127995 3623028 cbdb_A133 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307306.1 126922 R 255470 CDS YP_307307.1 73748068 3623034 complement(127992..129050) 1 NC_007356.1 ABC transporter permease 129050 3623034 cbdb_A134 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307307.1 127992 R 255470 CDS YP_307308.1 73748069 3623042 complement(129047..129913) 1 NC_007356.1 ABC transporter ATP-binding protein 129913 3623042 cbdb_A136 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307308.1 129047 R 255470 CDS YP_307309.1 73748070 3623048 complement(129925..130584) 1 NC_007356.1 TetR family transcriptional regulator 130584 3623048 cbdb_A137 Dehalococcoides mccartyi CBDB1 TetR family transcriptional regulator YP_307309.1 129925 R 255470 CDS YP_307310.1 73748071 3623741 complement(130743..131285) 1 NC_007356.1 DJ-1 family protein 131285 3623741 cbdb_A138 Dehalococcoides mccartyi CBDB1 DJ-1 family protein YP_307310.1 130743 R 255470 CDS YP_307311.1 73748072 3623696 131579..133327 1 NC_007356.1 catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 133327 oadA 3623696 oadA Dehalococcoides mccartyi CBDB1 pyruvate carboxylase subunit B YP_307311.1 131579 D 255470 CDS YP_307312.1 73748073 3623091 133320..134816 1 NC_007356.1 catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate; pyruvate carboxylase subunit A 134816 accC 3623091 accC Dehalococcoides mccartyi CBDB1 pyruvate carboxylase subunit A YP_307312.1 133320 D 255470 CDS YP_307313.1 73748074 3622995 complement(134813..135100) 1 NC_007356.1 hypothetical protein 135100 3622995 cbdb_A142 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307313.1 134813 R 255470 CDS YP_307314.1 73748075 3623001 complement(135231..137033) 1 NC_007356.1 pyridine nucleotide-disulfide oxidoreductase 137033 3623001 cbdb_A143 Dehalococcoides mccartyi CBDB1 pyridine nucleotide-disulfide oxidoreductase YP_307314.1 135231 R 255470 CDS YP_307315.1 73748076 3623085 complement(137386..137532) 1 NC_007356.1 hypothetical protein 137532 3623085 cbdb_B8 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307315.1 137386 R 255470 CDS YP_307316.1 73748077 3623009 137575..138606 1 NC_007356.1 zinc-containing alcohol dehydrogenase 138606 3623009 cbdb_A145 Dehalococcoides mccartyi CBDB1 zinc-containing alcohol dehydrogenase YP_307316.1 137575 D 255470 CDS YP_307317.1 73748078 3623810 138621..139745 1 NC_007356.1 anthranilate phosphoribosyltransferase 139745 trpD 3623810 trpD Dehalococcoides mccartyi CBDB1 anthranilate phosphoribosyltransferase YP_307317.1 138621 D 255470 CDS YP_307318.1 73748079 3623321 complement(139833..143021) 1 NC_007356.1 sensor histidine kinase 143021 3623321 cbdb_A148 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307318.1 139833 R 255470 CDS YP_307319.1 73748080 3623150 complement(143100..144491) 1 NC_007356.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 144491 cobB 3623150 cobB Dehalococcoides mccartyi CBDB1 cobyrinic acid a,c-diamide synthase YP_307319.1 143100 R 255470 CDS YP_307320.1 73748081 3623852 complement(144531..144947) 1 NC_007356.1 hypothetical protein 144947 3623852 cbdb_A150 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307320.1 144531 R 255470 CDS YP_307321.1 73748082 3623856 complement(144940..145311) 1 NC_007356.1 DNA-binding response regulator 145311 3623856 cbdb_A151 Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_307321.1 144940 R 255470 CDS YP_307322.1 73748083 3623508 complement(145392..145784) 1 NC_007356.1 response regulator 145784 3623508 cbdb_A153 Dehalococcoides mccartyi CBDB1 response regulator YP_307322.1 145392 R 255470 CDS YP_307323.1 73748084 3623513 complement(145929..146501) 1 NC_007356.1 rhomboid family protein 146501 3623513 cbdb_A154 Dehalococcoides mccartyi CBDB1 rhomboid family protein YP_307323.1 145929 R 255470 CDS YP_307324.1 73748085 3623267 146608..147567 1 NC_007356.1 ornithine cyclodeaminase 147567 arcB 3623267 arcB Dehalococcoides mccartyi CBDB1 ornithine cyclodeaminase YP_307324.1 146608 D 255470 CDS YP_307325.1 73748086 3623515 complement(147571..147783) 1 NC_007356.1 hypothetical protein 147783 3623515 cbdb_A156 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307325.1 147571 R 255470 CDS YP_307326.1 73748087 3623518 complement(147873..148292) 1 NC_007356.1 general secretion pathway protein H 148292 3623518 cbdb_A157 Dehalococcoides mccartyi CBDB1 general secretion pathway protein H YP_307326.1 147873 R 255470 CDS YP_307327.1 73748088 3623067 148425..149117 1 NC_007356.1 DNA-binding response regulator 149117 3623067 cbdb_A158 Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_307327.1 148425 D 255470 CDS YP_307328.1 73748089 3623894 149120..150865 1 NC_007356.1 sensor histidine kinase 150865 3623894 cbdb_A159 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307328.1 149120 D 255470 CDS YP_307329.1 73748090 3623752 151074..151508 1 NC_007356.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 151508 mgsA 3623752 mgsA Dehalococcoides mccartyi CBDB1 methylglyoxal synthase YP_307329.1 151074 D 255470 CDS YP_307330.1 73748091 3623737 151578..152402 1 NC_007356.1 phosphate ABC transporter substrate-binding protein 152402 pstS 3623737 pstS Dehalococcoides mccartyi CBDB1 phosphate ABC transporter substrate-binding protein YP_307330.1 151578 D 255470 CDS YP_307331.1 73748092 3623499 152477..153337 1 NC_007356.1 phosphate ABC transporter permease 153337 3623499 cbdb_A162 Dehalococcoides mccartyi CBDB1 phosphate ABC transporter permease YP_307331.1 152477 D 255470 CDS YP_307332.1 73748093 3623504 153330..154181 1 NC_007356.1 phosphate ABC transporter permease 154181 3623504 cbdb_A164 Dehalococcoides mccartyi CBDB1 phosphate ABC transporter permease YP_307332.1 153330 D 255470 CDS YP_307333.1 73748094 3623736 154182..154937 1 NC_007356.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 154937 pstB 3623736 pstB Dehalococcoides mccartyi CBDB1 phosphate ABC transporter ATP-binding protein YP_307333.1 154182 D 255470 CDS YP_307334.1 73748095 3623969 154950..155615 1 NC_007356.1 phosphate transport system regulatory protein PhoU 155615 phoU 3623969 phoU Dehalococcoides mccartyi CBDB1 phosphate transport system regulatory protein PhoU YP_307334.1 154950 D 255470 CDS YP_307335.1 73748096 3622650 155617..156030 1 NC_007356.1 arsenate reductase 156030 arsC 3622650 arsC Dehalococcoides mccartyi CBDB1 arsenate reductase YP_307335.1 155617 D 255470 CDS YP_307336.1 73748097 3622759 156473..156940 1 NC_007356.1 [Fe] hydrogenase subunit HymA 156940 hymA 3622759 hymA Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase subunit HymA YP_307336.1 156473 D 255470 CDS YP_307337.1 73748098 3622761 156942..158195 1 NC_007356.1 [Fe] hydrogenase subunit HymB 158195 hymB 3622761 hymB Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase subunit HymB YP_307337.1 156942 D 255470 CDS YP_307338.1 73748099 3623073 158183..159904 1 NC_007356.1 [Fe] hydrogenase, large subunit HymC 159904 hymC 3623073 hymC Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase, large subunit HymC YP_307338.1 158183 D 255470 CDS YP_307339.1 73748100 3623983 159944..160447 1 NC_007356.1 [Fe] hydrogenase subunit HymD 160447 hymD 3623983 hymD Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase subunit HymD YP_307339.1 159944 D 255470 CDS YP_307340.1 73748101 3624060 complement(160499..160666) 1 NC_007356.1 hypothetical protein 160666 3624060 cbdb_A174 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307340.1 160499 R 255470 CDS YP_307341.1 73748102 3624062 complement(160674..161507) 1 NC_007356.1 lysophospholipase 161507 3624062 cbdb_A175 Dehalococcoides mccartyi CBDB1 lysophospholipase YP_307341.1 160674 R 255470 CDS YP_307342.1 73748103 3624063 complement(161514..161774) 1 NC_007356.1 hypothetical protein 161774 3624063 cbdb_A176 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307342.1 161514 R 255470 CDS YP_307343.1 73748104 3624064 complement(161998..162720) 1 NC_007356.1 hypothetical protein 162720 3624064 cbdb_A178 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307343.1 161998 R 255470 CDS YP_307344.1 73748105 3624065 complement(162717..163610) 1 NC_007356.1 hypothetical protein 163610 3624065 cbdb_A180 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307344.1 162717 R 255470 CDS YP_307345.1 73748106 3623606 163704..164738 1 NC_007356.1 threonine aldolase 164738 gly1 3623606 gly1 Dehalococcoides mccartyi CBDB1 threonine aldolase YP_307345.1 163704 D 255470 CDS YP_307346.1 73748107 3624066 164848..165342 1 NC_007356.1 hypothetical protein 165342 3624066 cbdb_A182 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307346.1 164848 D 255470 CDS YP_307347.1 73748108 3624067 165506..166189 1 NC_007356.1 hypothetical protein 166189 3624067 cbdb_A183 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307347.1 165506 D 255470 CDS YP_307348.1 73748109 3623086 166392..166817 1 NC_007356.1 hypothetical protein 166817 3623086 cbdb_B9 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307348.1 166392 D 255470 CDS YP_307349.1 73748110 3623885 complement(167058..167738) 1 NC_007356.1 DNA-binding response regulator 167738 rdhD 3623885 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_307349.1 167058 R 255470 CDS YP_307350.1 73748111 3623845 complement(167719..169512) 1 NC_007356.1 sensor histidine kinase 169512 rdhC 3623845 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307350.1 167719 R 255470 CDS YP_307351.1 73748112 3624068 complement(169496..170095) 1 NC_007356.1 hypothetical protein 170095 3624068 cbdb_A186 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307351.1 169496 R 255470 CDS YP_307352.1 73748113 3623477 170338..171705 1 NC_007356.1 reductive dehalogenase 171705 rdhA 3623477 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_307352.1 170338 D 255470 CDS YP_307353.1 73748114 3623829 171754..172041 1 NC_007356.1 reductive dehalogenase anchoring protein 172041 rdhB 3623829 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_307353.1 171754 D 255470 CDS YP_307354.1 73748115 3622954 complement(172045..172299) 1 NC_007356.1 hypothetical protein 172299 3622954 cbdb_B10 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307354.1 172045 R 255470 CDS YP_307355.1 73748116 3624069 172497..174182 1 NC_007356.1 ATP-dependent RNA helicase, DEAD 174182 3624069 cbdb_A189 Dehalococcoides mccartyi CBDB1 ATP-dependent RNA helicase, DEAD YP_307355.1 172497 D 255470 CDS YP_307356.1 73748117 3624071 174349..175314 1 NC_007356.1 TerC family membrane protein 175314 3624071 cbdb_A190 Dehalococcoides mccartyi CBDB1 TerC family membrane protein YP_307356.1 174349 D 255470 CDS YP_307357.1 73748118 3623287 complement(175495..176343) 1 NC_007356.1 formate dehydrogenase accessory protein 176343 fdhE 3623287 fdhE Dehalococcoides mccartyi CBDB1 formate dehydrogenase accessory protein YP_307357.1 175495 R 255470 CDS YP_307358.1 73748119 3624072 complement(176344..177555) 1 NC_007356.1 formate dehydrogenase, membrane subunit 177555 3624072 cbdb_A193 Dehalococcoides mccartyi CBDB1 formate dehydrogenase, membrane subunit YP_307358.1 176344 R 255470 CDS YP_307359.1 73748120 3623288 complement(177643..180624) 1 NC_007356.1 formate dehydrogenase, major subunit 180624 fdnG 3623288 fdnG Dehalococcoides mccartyi CBDB1 formate dehydrogenase, major subunit YP_307359.1 177643 R 255470 CDS YP_307360.1 73748121 3624073 181003..181581 1 NC_007356.1 methyltransferase 181581 3624073 cbdb_A196 Dehalococcoides mccartyi CBDB1 methyltransferase YP_307360.1 181003 D 255470 CDS YP_307361.1 73748122 3623656 181553..182032 1 NC_007356.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 182032 coaD 3623656 coaD Dehalococcoides mccartyi CBDB1 phosphopantetheine adenylyltransferase YP_307361.1 181553 D 255470 CDS YP_307362.1 73748123 3623289 182121..182375 1 NC_007356.1 ferredoxin, iron-sulfur cluster-binding protein 182375 fdx1 3623289 fdx1 Dehalococcoides mccartyi CBDB1 ferredoxin, iron-sulfur cluster-binding protein YP_307362.1 182121 D 255470 CDS YP_307363.1 73748124 3624074 complement(182486..182974) 1 NC_007356.1 colicin V production family protein 182974 3624074 cbdb_A199 Dehalococcoides mccartyi CBDB1 colicin V production family protein YP_307363.1 182486 R 255470 CDS YP_307364.1 73748125 3623733 complement(183068..183871) 1 NC_007356.1 pyrroline-5-carboxylate reductase 183871 proC 3623733 proC Dehalococcoides mccartyi CBDB1 pyrroline-5-carboxylate reductase YP_307364.1 183068 R 255470 CDS YP_307365.1 73748126 3624004 complement(183873..186314) 1 NC_007356.1 leucyl-tRNA synthetase 186314 leuS 3624004 leuS Dehalococcoides mccartyi CBDB1 leucyl-tRNA synthetase YP_307365.1 183873 R 255470 CDS YP_307366.1 73748127 3624076 186489..187796 1 NC_007356.1 hypothetical protein 187796 3624076 cbdb_A203 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307366.1 186489 D 255470 CDS YP_307367.1 73748128 3624077 187800..188330 1 NC_007356.1 hypothetical protein 188330 3624077 cbdb_A205 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307367.1 187800 D 255470 CDS YP_307368.1 73748129 3624078 188488..188874 1 NC_007356.1 hypothetical protein 188874 3624078 cbdb_A206 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307368.1 188488 D 255470 CDS YP_307369.1 73748130 3624079 189065..189340 1 NC_007356.1 glutaredoxin family protein 189340 3624079 cbdb_A207 Dehalococcoides mccartyi CBDB1 glutaredoxin family protein YP_307369.1 189065 D 255470 CDS YP_307370.1 73748131 3624080 189337..189840 1 NC_007356.1 ferredoxin-thioredoxin reductase,catalyticsubunit 189840 3624080 cbdb_A208 Dehalococcoides mccartyi CBDB1 ferredoxin-thioredoxin reductase,catalyticsubunit YP_307370.1 189337 D 255470 CDS YP_307371.1 73748132 3624081 189932..190843 1 NC_007356.1 hypothetical protein 190843 3624081 cbdb_A209 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307371.1 189932 D 255470 CDS YP_307372.1 73748133 3624082 complement(190856..191863) 1 NC_007356.1 glycosyltransferase 191863 3624082 cbdb_A212 Dehalococcoides mccartyi CBDB1 glycosyltransferase YP_307372.1 190856 R 255470 CDS YP_307373.1 73748134 3624083 192154..192987 1 NC_007356.1 LmbE-like family protein 192987 3624083 cbdb_A213 Dehalococcoides mccartyi CBDB1 LmbE-like family protein YP_307373.1 192154 D 255470 CDS YP_307374.1 73748135 3624084 193064..193204 1 NC_007356.1 hypothetical protein 193204 3624084 cbdb_A214 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307374.1 193064 D 255470 CDS YP_307375.1 73748136 3624085 193259..194233 1 NC_007356.1 oxidoreductase, aldo reductase 194233 3624085 cbdb_A215 Dehalococcoides mccartyi CBDB1 oxidoreductase, aldo reductase YP_307375.1 193259 D 255470 CDS YP_307376.1 73748137 3624086 complement(194230..194583) 1 NC_007356.1 DNA-binding protein 194583 3624086 cbdb_A217 Dehalococcoides mccartyi CBDB1 DNA-binding protein YP_307376.1 194230 R 255470 CDS YP_307377.1 73748138 3624087 194735..195229 1 NC_007356.1 PBS lyase 195229 3624087 cbdb_A218 Dehalococcoides mccartyi CBDB1 PBS lyase YP_307377.1 194735 D 255470 CDS YP_307378.1 73748139 3623995 195748..197874 1 NC_007356.1 L-lysine 2,3-aminomutase 197874 kamA 3623995 kamA Dehalococcoides mccartyi CBDB1 L-lysine 2,3-aminomutase YP_307378.1 195748 D 255470 CDS YP_307379.1 73748140 3624088 complement(197956..199236) 1 NC_007356.1 serine protease inhibitor family protein 199236 3624088 cbdb_A222 Dehalococcoides mccartyi CBDB1 serine protease inhibitor family protein YP_307379.1 197956 R 255470 CDS YP_307380.1 73748141 3624089 199422..200009 1 NC_007356.1 Hly-III family-like protein 200009 3624089 cbdb_A225 Dehalococcoides mccartyi CBDB1 Hly-III family-like protein YP_307380.1 199422 D 255470 CDS YP_307381.1 73748142 3624090 complement(200006..201997) 1 NC_007356.1 ABC transporter ATP-binding protein 201997 3624090 cbdb_A226 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307381.1 200006 R 255470 CDS YP_307382.1 73748143 3624091 complement(202131..202988) 1 NC_007356.1 hypothetical protein 202988 3624091 cbdb_A227 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307382.1 202131 R 255470 CDS YP_307383.1 73748144 3624092 complement(203114..204253) 1 NC_007356.1 hypothetical protein 204253 3624092 cbdb_A228 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307383.1 203114 R 255470 CDS YP_307384.1 73748145 3624093 complement(204507..204848) 1 NC_007356.1 hypothetical protein 204848 3624093 cbdb_A229 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307384.1 204507 R 255470 CDS YP_307385.1 73748146 3624094 complement(204861..205118) 1 NC_007356.1 hypothetical protein 205118 3624094 cbdb_A230 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307385.1 204861 R 255470 CDS YP_307386.1 73748147 3624095 complement(205206..205532) 1 NC_007356.1 hypothetical protein 205532 3624095 cbdb_A232 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307386.1 205206 R 255470 CDS YP_307387.1 73748148 3623886 complement(205920..206597) 1 NC_007356.1 DNA-binding response regulator 206597 rdhD 3623886 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_307387.1 205920 R 255470 CDS YP_307388.1 73748149 3623846 complement(206594..207874) 1 NC_007356.1 sensor histidine kinase 207874 rdhC 3623846 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307388.1 206594 R 255470 CDS YP_307389.1 73748150 3624096 207922..208149 1 NC_007356.1 hypothetical protein 208149 3624096 cbdb_A237 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307389.1 207922 D 255470 CDS YP_307390.1 73748151 3623478 208160..209704 1 NC_007356.1 reductive dehalogenase 209704 rdhA 3623478 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_307390.1 208160 D 255470 CDS YP_307391.1 73748152 3623830 209728..210000 1 NC_007356.1 reductive dehalogenase anchoring protein 210000 rdhB 3623830 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_307391.1 209728 D 255470 CDS YP_307392.1 73748153 3623887 complement(210286..210969) 1 NC_007356.1 DNA-binding response regulator 210969 rdhD 3623887 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_307392.1 210286 R 255470 CDS YP_307393.1 73748154 3623847 complement(210950..212773) 1 NC_007356.1 sensor histidine kinase 212773 rdhC 3623847 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307393.1 210950 R 255470 CDS YP_307394.1 73748155 3624098 complement(212775..213392) 1 NC_007356.1 hypothetical protein 213392 3624098 cbdb_A242 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307394.1 212775 R 255470 CDS YP_307395.1 73748156 3623479 213820..215295 1 NC_007356.1 reductive dehalogenase 215295 rdhA 3623479 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_307395.1 213820 D 255470 CDS YP_307396.1 73748157 3623837 215348..215626 1 NC_007356.1 reductive dehalogenase anchoring protein 215626 rdhB 3623837 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_307396.1 215348 D 255470 CDS YP_307397.1 73748158 3623164 215811..217034 1 NC_007356.1 membrane bound regulatory protein 217034 cprC 3623164 cprC Dehalococcoides mccartyi CBDB1 membrane bound regulatory protein YP_307397.1 215811 D 255470 CDS YP_307398.1 73748159 3623417 217167..217922 1 NC_007356.1 hypothetical protein 217922 rdhH 3623417 rdhH Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307398.1 217167 D 255470 CDS YP_307399.1 73748160 3623423 217919..218665 1 NC_007356.1 radical SAM domain-containing protein 218665 rdhI 3623423 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_307399.1 217919 D 255470 CDS YP_307400.1 73748161 3624099 218670..219383 1 NC_007356.1 precorrin methylase 219383 3624099 cbdb_A247 Dehalococcoides mccartyi CBDB1 precorrin methylase YP_307400.1 218670 D 255470 CDS YP_307401.1 73748162 3623424 219395..220231 1 NC_007356.1 radical SAM domain-containing protein 220231 rdhI 3623424 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_307401.1 219395 D 255470 CDS YP_307402.1 73748163 3623119 220262..221041 1 NC_007356.1 hypothetical protein 221041 rdhF 3623119 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307402.1 220262 D 255470 CDS YP_307403.1 73748164 3623425 221047..221787 1 NC_007356.1 radical SAM domain-containing protein 221787 rdhI 3623425 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_307403.1 221047 D 255470 CDS YP_307404.1 73748165 3623683 221796..223553 1 NC_007356.1 ribonucleotide reductase 223553 nrd 3623683 nrd Dehalococcoides mccartyi CBDB1 ribonucleotide reductase YP_307404.1 221796 D 255470 CDS YP_307405.1 73748166 3623660 223546..224085 1 NC_007356.1 cob(I)alamin adenosyltransferase 224085 cobA 3623660 cobA Dehalococcoides mccartyi CBDB1 cob(I)alamin adenosyltransferase YP_307405.1 223546 D 255470 CDS YP_307406.1 73748167 3623153 224102..225058 1 NC_007356.1 cobalamin biosynthesis protein 225058 cobD 3623153 cobD Dehalococcoides mccartyi CBDB1 cobalamin biosynthesis protein YP_307406.1 224102 D 255470 CDS YP_307407.1 73748168 3624101 225073..225333 1 NC_007356.1 hypothetical protein 225333 3624101 cbdb_A255 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307407.1 225073 D 255470 CDS YP_307408.1 73748169 3624102 225348..226499 1 NC_007356.1 cysteine desulfurase 226499 3624102 cbdb_A257 Dehalococcoides mccartyi CBDB1 cysteine desulfurase YP_307408.1 225348 D 255470 CDS YP_307409.1 73748170 3623120 226493..227317 1 NC_007356.1 hypothetical protein 227317 rdhF 3623120 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307409.1 226493 D 255470 CDS YP_307410.1 73748171 3624103 227314..228873 1 NC_007356.1 precorrin methylase 228873 3624103 cbdb_A259 Dehalococcoides mccartyi CBDB1 precorrin methylase YP_307410.1 227314 D 255470 CDS YP_307411.1 73748172 3624105 complement(229294..229713) 1 NC_007356.1 hypothetical protein 229713 3624105 cbdb_A260 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307411.1 229294 R 255470 CDS YP_307412.1 73748173 3624106 complement(229939..230106) 1 NC_007356.1 hypothetical protein 230106 3624106 cbdb_A261 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307412.1 229939 R 255470 CDS YP_307413.1 73748174 3624107 230240..230983 1 NC_007356.1 transcriptional regulator cNTP-binding, Crp 230983 3624107 cbdb_A262 Dehalococcoides mccartyi CBDB1 transcriptional regulator cNTP-binding, Crp YP_307413.1 230240 D 255470 CDS YP_307414.1 73748175 3623907 complement(231310..232137) 1 NC_007356.1 patatin-like phospholipase 232137 3623907 cbdb_A263 Dehalococcoides mccartyi CBDB1 patatin-like phospholipase YP_307414.1 231310 R 255470 CDS YP_307415.1 73748176 3623380 complement(232115..232750) 1 NC_007356.1 acetyltransferase 232750 rimL 3623380 rimL Dehalococcoides mccartyi CBDB1 acetyltransferase YP_307415.1 232115 R 255470 CDS YP_307416.1 73748177 3623908 complement(232755..234347) 1 NC_007356.1 hypothetical protein 234347 3623908 cbdb_A266 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307416.1 232755 R 255470 CDS YP_307417.1 73748178 3623909 complement(234344..234943) 1 NC_007356.1 hypothetical protein 234943 3623909 cbdb_A267 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307417.1 234344 R 255470 CDS YP_307418.1 73748179 3623910 complement(235013..236218) 1 NC_007356.1 hypothetical protein 236218 3623910 cbdb_A268 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307418.1 235013 R 255470 CDS YP_307419.1 73748180 3623911 236343..236966 1 NC_007356.1 amino acid transporter LysE 236966 3623911 cbdb_A269 Dehalococcoides mccartyi CBDB1 amino acid transporter LysE YP_307419.1 236343 D 255470 CDS YP_307420.1 73748181 3623913 236993..238018 1 NC_007356.1 histone deacetylase 238018 3623913 cbdb_A270 Dehalococcoides mccartyi CBDB1 histone deacetylase YP_307420.1 236993 D 255470 CDS YP_307421.1 73748182 3623914 complement(237992..238927) 1 NC_007356.1 cation efflux family protein 238927 3623914 cbdb_A271 Dehalococcoides mccartyi CBDB1 cation efflux family protein YP_307421.1 237992 R 255470 CDS YP_307422.1 73748183 3623784 complement(238950..239855) 1 NC_007356.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 239855 secF 3623784 secF Dehalococcoides mccartyi CBDB1 preprotein translocase subunit SecF YP_307422.1 238950 R 255470 CDS YP_307423.1 73748184 3623782 complement(239848..241197) 1 NC_007356.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 241197 secD 3623782 secD Dehalococcoides mccartyi CBDB1 preprotein translocase subunit SecD YP_307423.1 239848 R 255470 CDS YP_307424.1 73748185 3623915 complement(241211..242707) 1 NC_007356.1 poly(A) polymerase 242707 3623915 cbdb_A275 Dehalococcoides mccartyi CBDB1 poly(A) polymerase YP_307424.1 241211 R 255470 CDS YP_307425.1 73748186 3623916 complement(242867..243268) 1 NC_007356.1 DNA-binding protein 243268 3623916 cbdb_A276 Dehalococcoides mccartyi CBDB1 DNA-binding protein YP_307425.1 242867 R 255470 CDS YP_307426.1 73748187 3623730 complement(243528..245975) 1 NC_007356.1 primosomal protein N' 245975 priA 3623730 priA Dehalococcoides mccartyi CBDB1 primosomal protein N' YP_307426.1 243528 R 255470 CDS YP_307427.1 73748188 3623364 complement(245996..246391) 1 NC_007356.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 246391 rplS 3623364 rplS Dehalococcoides mccartyi CBDB1 50S ribosomal protein L19 YP_307427.1 245996 R 255470 CDS YP_307428.1 73748189 3624030 complement(246515..247261) 1 NC_007356.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 247261 trmD 3624030 trmD Dehalococcoides mccartyi CBDB1 tRNA (guanine-N(1)-)-methyltransferase YP_307428.1 246515 R 255470 CDS YP_307429.1 73748190 3623917 247460..247870 1 NC_007356.1 hypothetical protein 247870 3623917 cbdb_A280 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307429.1 247460 D 255470 CDS YP_307430.1 73748191 3623756 247877..248926 1 NC_007356.1 S-adenosyl-methyltransferase MraW 248926 mraW 3623756 mraW Dehalococcoides mccartyi CBDB1 S-adenosyl-methyltransferase MraW YP_307430.1 247877 D 255470 CDS YP_307431.1 73748192 3622840 248997..250223 1 NC_007356.1 cell division protein FtsA 250223 ftsA 3622840 ftsA Dehalococcoides mccartyi CBDB1 cell division protein FtsA YP_307431.1 248997 D 255470 CDS YP_307432.1 73748193 3622844 250263..251393 1 NC_007356.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 251393 ftsZ 3622844 ftsZ Dehalococcoides mccartyi CBDB1 cell division protein FtsZ YP_307432.1 250263 D 255470 CDS YP_307433.1 73748194 3623918 251537..252064 1 NC_007356.1 transcriptional regulator NrdR 252064 nrdR 3623918 nrdR Dehalococcoides mccartyi CBDB1 transcriptional regulator NrdR YP_307433.1 251537 D 255470 CDS YP_307434.1 73748195 3623685 252381..254666 1 NC_007356.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 254666 nrdA 3623685 nrdA Dehalococcoides mccartyi CBDB1 ribonucleotide-diphosphate reductase subunit alpha YP_307434.1 252381 D 255470 CDS YP_307435.1 73748196 3623919 254660..254779 1 NC_007356.1 hypothetical protein 254779 3623919 cbdb_A288 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307435.1 254660 D 255470 CDS YP_307436.1 73748197 3623920 254896..255480 1 NC_007356.1 hypothetical protein 255480 3623920 cbdb_A289 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307436.1 254896 D 255470 CDS YP_307437.1 73748198 3623921 255449..257083 1 NC_007356.1 radical SAM domain-containing protein 257083 3623921 cbdb_A290 Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_307437.1 255449 D 255470 CDS YP_307438.1 73748199 3623922 complement(257132..257581) 1 NC_007356.1 GatB domain-containing protein 257581 3623922 cbdb_A292 Dehalococcoides mccartyi CBDB1 GatB domain-containing protein YP_307438.1 257132 R 255470 CDS YP_307439.1 73748200 3623776 complement(257583..257777) 1 NC_007356.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 257777 rpsU 3623776 rpsU Dehalococcoides mccartyi CBDB1 30S ribosomal protein S21 YP_307439.1 257583 R 255470 CDS YP_307440.1 73748201 3623923 complement(257949..259712) 1 NC_007356.1 hypothetical protein 259712 3623923 cbdb_A294 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307440.1 257949 R 255470 CDS YP_307441.1 73748202 3623924 complement(259975..261192) 1 NC_007356.1 hypothetical protein 261192 3623924 cbdb_A296 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307441.1 259975 R 255470 CDS YP_307442.1 73748203 3623925 complement(261227..261610) 1 NC_007356.1 hypothetical protein 261610 3623925 cbdb_A297 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307442.1 261227 R 255470 CDS YP_307443.1 73748204 3623926 261697..262392 1 NC_007356.1 hypothetical protein 262392 3623926 cbdb_A298 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307443.1 261697 D 255470 CDS YP_307444.1 73748205 3623927 262669..262815 1 NC_007356.1 hypothetical protein 262815 3623927 cbdb_A299 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307444.1 262669 D 255470 CDS YP_307445.1 73748206 3623928 complement(263356..264015) 1 NC_007356.1 hypothetical protein 264015 3623928 cbdb_A300 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307445.1 263356 R 255470 CDS YP_307446.1 73748207 3623929 complement(264155..264259) 1 NC_007356.1 hypothetical protein 264259 3623929 cbdb_A302 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307446.1 264155 R 255470 CDS YP_307447.1 73748208 3623930 264305..264457 1 NC_007356.1 hypothetical protein 264457 3623930 cbdb_A303 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307447.1 264305 D 255470 CDS YP_307448.1 73748209 3623727 264644..265777 1 NC_007356.1 carboxyl-terminal protease 265777 prc 3623727 prc Dehalococcoides mccartyi CBDB1 carboxyl-terminal protease YP_307448.1 264644 D 255470 CDS YP_307449.1 73748210 3623967 265893..266933 1 NC_007356.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 266933 pheS 3623967 pheS Dehalococcoides mccartyi CBDB1 phenylalanyl-tRNA synthetase subunit alpha YP_307449.1 265893 D 255470 CDS YP_307450.1 73748211 3623968 266935..269364 1 NC_007356.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 269364 pheT 3623968 pheT Dehalococcoides mccartyi CBDB1 phenylalanyl-tRNA synthetase subunit beta YP_307450.1 266935 D 255470 CDS YP_307451.1 73748212 3623724 269454..270089 1 NC_007356.1 catalyzes the hydrolysis of pyrophosphate; inorganic pyrophosphatase 270089 ppa 3623724 ppa Dehalococcoides mccartyi CBDB1 inorganic pyrophosphatase YP_307451.1 269454 D 255470 CDS YP_307452.1 73748213 3623734 complement(270155..271864) 1 NC_007356.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 271864 proS 3623734 proS Dehalococcoides mccartyi CBDB1 prolyl-tRNA synthetase YP_307452.1 270155 R 255470 CDS YP_307453.1 73748214 3623993 complement(271958..273004) 1 NC_007356.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 273004 ispG 3623993 ispG Dehalococcoides mccartyi CBDB1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_307453.1 271958 R 255470 CDS YP_307454.1 73748215 3623931 complement(273040..274077) 1 NC_007356.1 membrane-associated zinc metalloprotease 274077 3623931 cbdb_A313 Dehalococcoides mccartyi CBDB1 membrane-associated zinc metalloprotease YP_307454.1 273040 R 255470 CDS YP_307455.1 73748216 3623187 complement(274078..275211) 1 NC_007356.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 275211 dxr 3623187 dxr Dehalococcoides mccartyi CBDB1 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_307455.1 274078 R 255470 CDS YP_307456.1 73748217 3622775 complement(275196..275999) 1 NC_007356.1 phosphatidate cytidylyltransferase 275999 cdsA 3622775 cdsA Dehalococcoides mccartyi CBDB1 phosphatidate cytidylyltransferase YP_307456.1 275196 R 255470 CDS YP_307457.1 73748218 3623823 complement(276003..276713) 1 NC_007356.1 undecaprenyl diphosphate synthase 276713 uppS 3623823 uppS Dehalococcoides mccartyi CBDB1 undecaprenyl diphosphate synthase YP_307457.1 276003 R 255470 CDS YP_307458.1 73748219 3622839 complement(276778..277335) 1 NC_007356.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 277335 frr 3622839 frr Dehalococcoides mccartyi CBDB1 ribosome recycling factor YP_307458.1 276778 R 255470 CDS YP_307459.1 73748220 3623678 complement(277337..278062) 1 NC_007356.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 278062 pyrH 3623678 pyrH Dehalococcoides mccartyi CBDB1 uridylate kinase YP_307459.1 277337 R 255470 CDS YP_307460.1 73748221 3623819 complement(278077..278580) 1 NC_007356.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 278580 tsf 3623819 tsf Dehalococcoides mccartyi CBDB1 elongation factor Ts YP_307460.1 278077 R 255470 CDS YP_307461.1 73748222 3623796 complement(278605..279342) 1 NC_007356.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 279342 rpsB 3623796 rpsB Dehalococcoides mccartyi CBDB1 30S ribosomal protein S2 YP_307461.1 278605 R 255470 CDS YP_307462.1 73748223 3623670 complement(279527..280294) 1 NC_007356.1 phosphoribosylformylglycinamidine synthase I 280294 purQ 3623670 purQ Dehalococcoides mccartyi CBDB1 phosphoribosylformylglycinamidine synthase I YP_307462.1 279527 R 255470 CDS YP_307463.1 73748224 3623668 complement(280301..283162) 1 NC_007356.1 phosphoribosylformylglycinamidine synthase II 283162 purL 3623668 purL Dehalococcoides mccartyi CBDB1 phosphoribosylformylglycinamidine synthase II YP_307463.1 280301 R 255470 CDS YP_307464.1 73748225 3623933 complement(283166..284047) 1 NC_007356.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 284047 3623933 cbdb_A327 Dehalococcoides mccartyi CBDB1 pyridoxal biosynthesis lyase PdxS YP_307464.1 283166 R 255470 CDS YP_307465.1 73748226 3623934 284253..284630 1 NC_007356.1 (Fe-S)-binding protein 284630 3623934 cbdb_A328 Dehalococcoides mccartyi CBDB1 (Fe-S)-binding protein YP_307465.1 284253 D 255470 CDS YP_307466.1 73748227 3622955 284811..285581 1 NC_007356.1 hypothetical protein 285581 3622955 cbdb_B11 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307466.1 284811 D 255470 CDS YP_307467.1 73748228 3623935 complement(285660..286805) 1 NC_007356.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 286805 3623935 cbdb_A329 Dehalococcoides mccartyi CBDB1 inosine 5-monophosphate dehydrogenase YP_307467.1 285660 R 255470 CDS YP_307468.1 73748229 3623937 287067..287891 1 NC_007356.1 tetrapyrrole methylase 287891 3623937 cbdb_A331 Dehalococcoides mccartyi CBDB1 tetrapyrrole methylase YP_307468.1 287067 D 255470 CDS YP_307469.1 73748230 3623938 287916..288131 1 NC_007356.1 hypothetical protein 288131 3623938 cbdb_A332 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307469.1 287916 D 255470 CDS YP_307470.1 73748231 3623747 288140..289801 1 NC_007356.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 289801 metG 3623747 metG Dehalococcoides mccartyi CBDB1 methionyl-tRNA synthetase YP_307470.1 288140 D 255470 CDS YP_307471.1 73748232 3623615 289817..290797 1 NC_007356.1 heptaprenyl diphosphate synthase component II 290797 hepT 3623615 hepT Dehalococcoides mccartyi CBDB1 heptaprenyl diphosphate synthase component II YP_307471.1 289817 D 255470 CDS YP_307472.1 73748233 3622842 complement(291134..292960) 1 NC_007356.1 ATP-dependent metalloprotease FtsH 292960 ftsH 3622842 ftsH Dehalococcoides mccartyi CBDB1 ATP-dependent metalloprotease FtsH YP_307472.1 291134 R 255470 CDS YP_307473.1 73748234 3623940 complement(293020..293772) 1 NC_007356.1 AP endonuclease 293772 3623940 cbdb_A340 Dehalococcoides mccartyi CBDB1 AP endonuclease YP_307473.1 293020 R 255470 CDS YP_307474.1 73748235 3623941 293969..294313 1 NC_007356.1 iojap family protein 294313 3623941 cbdb_A342 Dehalococcoides mccartyi CBDB1 iojap family protein YP_307474.1 293969 D 255470 CDS YP_307475.1 73748236 3623769 complement(294314..294742) 1 NC_007356.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 294742 ndk 3623769 ndk Dehalococcoides mccartyi CBDB1 nucleoside diphosphate kinase YP_307475.1 294314 R 255470 CDS YP_307476.1 73748237 3623942 complement(294752..296122) 1 NC_007356.1 glycoprotease 296122 3623942 cbdb_A344 Dehalococcoides mccartyi CBDB1 glycoprotease YP_307476.1 294752 R 255470 CDS YP_307477.1 73748238 3623943 complement(296100..296591) 1 NC_007356.1 hypothetical protein 296591 3623943 cbdb_A346 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307477.1 296100 R 255470 CDS YP_307478.1 73748239 3623353 complement(296588..297598) 1 NC_007356.1 thiamine-monophosphate kinase 297598 thiL 3623353 thiL Dehalococcoides mccartyi CBDB1 thiamine-monophosphate kinase YP_307478.1 296588 R 255470 CDS YP_307479.1 73748240 3623944 297890..298666 1 NC_007356.1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE 298666 3623944 cbdb_A349 Dehalococcoides mccartyi CBDB1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE YP_307479.1 297890 D 255470 CDS YP_307480.1 73748241 3623945 298668..299435 1 NC_007356.1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE 299435 3623945 cbdb_A350 Dehalococcoides mccartyi CBDB1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE YP_307480.1 298668 D 255470 CDS YP_307481.1 73748242 3623548 299437..300531 1 NC_007356.1 3-dehydroquinate synthase 300531 aroB 3623548 aroB Dehalococcoides mccartyi CBDB1 3-dehydroquinate synthase YP_307481.1 299437 D 255470 CDS YP_307482.1 73748243 3623746 300515..301435 1 NC_007356.1 1,4-dihydroxy-2-naphthoateoctaprenyltransferase 301435 menA 3623746 menA Dehalococcoides mccartyi CBDB1 1,4-dihydroxy-2-naphthoateoctaprenyltransferase YP_307482.1 300515 D 255470 CDS YP_307483.1 73748244 3623946 301435..302037 1 NC_007356.1 SAM-dependent methyltransferase 302037 3623946 cbdb_A353 Dehalococcoides mccartyi CBDB1 SAM-dependent methyltransferase YP_307483.1 301435 D 255470 CDS YP_307484.1 73748245 3623947 302165..302896 1 NC_007356.1 serine/threonine protein phosphatase 302896 3623947 cbdb_A354 Dehalococcoides mccartyi CBDB1 serine/threonine protein phosphatase YP_307484.1 302165 D 255470 CDS YP_307485.1 73748246 3623997 302916..303791 1 NC_007356.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 303791 ksgA 3623997 ksgA Dehalococcoides mccartyi CBDB1 dimethyladenosine transferase YP_307485.1 302916 D 255470 CDS YP_307486.1 73748247 3623991 303785..304639 1 NC_007356.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 304639 ispE 3623991 ispE Dehalococcoides mccartyi CBDB1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_307486.1 303785 D 255470 CDS YP_307487.1 73748248 3623948 304713..305192 1 NC_007356.1 rubrerythrin 305192 3623948 cbdb_A358 Dehalococcoides mccartyi CBDB1 rubrerythrin YP_307487.1 304713 D 255470 CDS YP_307488.1 73748249 3623949 complement(305271..305510) 1 NC_007356.1 hypothetical protein 305510 3623949 cbdb_A359 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307488.1 305271 R 255470 CDS YP_307489.1 73748250 3623950 complement(305596..306402) 1 NC_007356.1 cation channel family protein 306402 3623950 cbdb_A360 Dehalococcoides mccartyi CBDB1 cation channel family protein YP_307489.1 305596 R 255470 CDS YP_307490.1 73748251 3623951 complement(306389..307645) 1 NC_007356.1 poly(A) polymerase 307645 3623951 cbdb_A361 Dehalococcoides mccartyi CBDB1 poly(A) polymerase YP_307490.1 306389 R 255470 CDS YP_307491.1 73748252 3623681 307726..308643 1 NC_007356.1 ABC transporter ATP-binding protein 308643 nodI 3623681 nodI Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307491.1 307726 D 255470 CDS YP_307492.1 73748253 3623682 308640..309407 1 NC_007356.1 ABC transporter permease 309407 nodJ 3623682 nodJ Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307492.1 308640 D 255470 CDS YP_307493.1 73748254 3623952 309457..310008 1 NC_007356.1 hypothetical protein 310008 3623952 cbdb_A364 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307493.1 309457 D 255470 CDS YP_307494.1 73748255 3623953 310005..310478 1 NC_007356.1 deoxycytidylate deaminase 310478 3623953 cbdb_A365 Dehalococcoides mccartyi CBDB1 deoxycytidylate deaminase YP_307494.1 310005 D 255470 CDS YP_307495.1 73748256 3623954 310566..311471 1 NC_007356.1 hypothetical protein 311471 3623954 cbdb_A367 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307495.1 310566 D 255470 CDS YP_307496.1 73748257 3623186 complement(311542..312054) 1 NC_007356.1 catalyzes the formation of UMP from UTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 312054 dut 3623186 dut Dehalococcoides mccartyi CBDB1 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_307496.1 311542 R 255470 CDS YP_307497.1 73748258 3622956 312268..312555 1 NC_007356.1 hypothetical protein 312555 3622956 cbdb_B12 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307497.1 312268 D 255470 CDS YP_307498.1 73748259 3623955 complement(312643..313404) 1 NC_007356.1 amino acid ABC transporter ATP-binding protein 313404 3623955 cbdb_A369 Dehalococcoides mccartyi CBDB1 amino acid ABC transporter ATP-binding protein YP_307498.1 312643 R 255470 CDS YP_307499.1 73748260 3623957 complement(313404..314225) 1 NC_007356.1 amino acid ABC transporter permease 314225 3623957 cbdb_A370 Dehalococcoides mccartyi CBDB1 amino acid ABC transporter permease YP_307499.1 313404 R 255470 CDS YP_307500.1 73748261 3623958 complement(314278..315051) 1 NC_007356.1 amino acid ABC transporter substrate-binding protein 315051 3623958 cbdb_A371 Dehalococcoides mccartyi CBDB1 amino acid ABC transporter substrate-binding protein YP_307500.1 314278 R 255470 CDS YP_307501.1 73748262 3622957 complement(315079..315228) 1 NC_007356.1 hypothetical protein 315228 3622957 cbdb_B13 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307501.1 315079 R 255470 CDS YP_307502.1 73748263 3623175 complement(315251..316090) 1 NC_007356.1 degV family protein 316090 degV 3623175 degV Dehalococcoides mccartyi CBDB1 degV family protein YP_307502.1 315251 R 255470 CDS YP_307503.1 73748264 3623959 316267..316407 1 NC_007356.1 hypothetical protein 316407 3623959 cbdb_A373 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307503.1 316267 D 255470 CDS YP_307504.1 73748265 3623162 316861..317811 1 NC_007356.1 magnesium and cobalt transport protein 317811 corA 3623162 corA Dehalococcoides mccartyi CBDB1 magnesium and cobalt transport protein YP_307504.1 316861 D 255470 CDS YP_307505.1 73748266 3623960 317833..318492 1 NC_007356.1 hypothetical protein 318492 3623960 cbdb_A376 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307505.1 317833 D 255470 CDS YP_307506.1 73748267 3623961 318513..319289 1 NC_007356.1 hypothetical protein 319289 3623961 cbdb_A377 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307506.1 318513 D 255470 CDS YP_307507.1 73748268 3623962 319292..319795 1 NC_007356.1 hypothetical protein 319795 3623962 cbdb_A378 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307507.1 319292 D 255470 CDS YP_307508.1 73748269 3623592 319832..321370 1 NC_007356.1 carbohydrate kinase 321370 3623592 cbdb_A380 Dehalococcoides mccartyi CBDB1 carbohydrate kinase YP_307508.1 319832 D 255470 CDS YP_307509.1 73748270 3622659 321374..322165 1 NC_007356.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 322165 3622659 cbdb_A381 Dehalococcoides mccartyi CBDB1 pantothenate kinase YP_307509.1 321374 D 255470 CDS YP_307510.1 73748271 3623655 322268..323449 1 NC_007356.1 phosphopantothenoylcysteine synthetase/decarboxylase 323449 coaBC 3623655 coaBC Dehalococcoides mccartyi CBDB1 phosphopantothenoylcysteine synthetase/decarboxylase YP_307510.1 322268 D 255470 CDS YP_307511.1 73748272 3623827 323537..326179 1 NC_007356.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 326179 valS 3623827 valS Dehalococcoides mccartyi CBDB1 valyl-tRNA synthetase YP_307511.1 323537 D 255470 CDS YP_307512.1 73748273 3622660 complement(326176..327249) 1 NC_007356.1 sensor histidine kinase 327249 3622660 cbdb_A385 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307512.1 326176 R 255470 CDS YP_307513.1 73748274 3622661 complement(327230..327928) 1 NC_007356.1 LuxR family transcriptional regulator 327928 3622661 cbdb_A386 Dehalococcoides mccartyi CBDB1 LuxR family transcriptional regulator YP_307513.1 327230 R 255470 CDS YP_307514.1 73748275 3622662 complement(328031..328714) 1 NC_007356.1 hypothetical protein 328714 3622662 cbdb_A387 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307514.1 328031 R 255470 CDS YP_307515.1 73748276 3623781 complement(328739..331597) 1 NC_007356.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 331597 secA 3623781 secA Dehalococcoides mccartyi CBDB1 preprotein translocase subunit SecA YP_307515.1 328739 R 255470 CDS YP_307516.1 73748277 3623735 complement(331601..332575) 1 NC_007356.1 ribose-phosphate pyrophosphokinase 332575 prs 3623735 prs Dehalococcoides mccartyi CBDB1 ribose-phosphate pyrophosphokinase YP_307516.1 331601 R 255470 CDS YP_307517.1 73748278 3623607 complement(332591..333838) 1 NC_007356.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 333838 glyA 3623607 glyA Dehalococcoides mccartyi CBDB1 serine hydroxymethyltransferase YP_307517.1 332591 R 255470 CDS YP_307518.1 73748279 3622664 333972..334592 1 NC_007356.1 uracil-DNA glycosylase 334592 3622664 cbdb_A391 Dehalococcoides mccartyi CBDB1 uracil-DNA glycosylase YP_307518.1 333972 D 255470 CDS YP_307519.1 73748280 3622665 334599..336254 1 NC_007356.1 metallo-beta-lactamase 336254 3622665 cbdb_A392 Dehalococcoides mccartyi CBDB1 metallo-beta-lactamase YP_307519.1 334599 D 255470 CDS YP_307520.1 73748281 3622843 336274..338724 1 NC_007356.1 DNA translocase FtsK 338724 ftsK 3622843 ftsK Dehalococcoides mccartyi CBDB1 DNA translocase FtsK YP_307520.1 336274 D 255470 CDS YP_307521.1 73748282 3622666 complement(338763..338912) 1 NC_007356.1 hypothetical protein 338912 3622666 cbdb_A394 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307521.1 338763 R 255470 CDS YP_307522.1 73748283 3623825 complement(338909..340903) 1 NC_007356.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 340903 uvrB 3623825 uvrB Dehalococcoides mccartyi CBDB1 excinuclease ABC subunit B YP_307522.1 338909 R 255470 CDS YP_307523.1 73748284 3623777 complement(340949..341533) 1 NC_007356.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 341533 ruvA 3623777 ruvA Dehalococcoides mccartyi CBDB1 Holliday junction DNA helicase RuvA YP_307523.1 340949 R 255470 CDS YP_307524.1 73748285 3623779 complement(341530..342033) 1 NC_007356.1 crossover junction endodeoxyribonuclease RuvC 342033 ruvC 3623779 ruvC Dehalococcoides mccartyi CBDB1 crossover junction endodeoxyribonuclease RuvC YP_307524.1 341530 R 255470 CDS YP_307525.1 73748286 3622668 complement(342037..342792) 1 NC_007356.1 hypothetical protein 342792 3622668 cbdb_A400 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307525.1 342037 R 255470 CDS YP_307526.1 73748287 3623257 complement(342909..343268) 1 NC_007356.1 holo-ACP synthase 343268 acpS 3623257 acpS Dehalococcoides mccartyi CBDB1 holo-ACP synthase YP_307526.1 342909 R 255470 CDS YP_307527.1 73748288 3622669 complement(343310..343774) 1 NC_007356.1 [Fe] hydrogenase subunit HymA 343774 3622669 cbdb_A403 Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase subunit HymA YP_307527.1 343310 R 255470 CDS YP_307528.1 73748289 3622670 344011..345561 1 NC_007356.1 acyl CoA biotin-dependent carboxyltransferase 345561 3622670 cbdb_A404 Dehalococcoides mccartyi CBDB1 acyl CoA biotin-dependent carboxyltransferase YP_307528.1 344011 D 255470 CDS YP_307529.1 73748290 3622671 345584..346837 1 NC_007356.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 346837 3622671 cbdb_A405 Dehalococcoides mccartyi CBDB1 3-isopropylmalate dehydratase large subunit YP_307529.1 345584 D 255470 CDS YP_307530.1 73748291 3622672 346837..347340 1 NC_007356.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 347340 leuD 3622672 leuD Dehalococcoides mccartyi CBDB1 3-isopropylmalate dehydratase small subunit YP_307530.1 346837 D 255470 CDS YP_307531.1 73748292 3622673 347355..348434 1 NC_007356.1 isocitrate dehydrogenase 348434 3622673 cbdb_A408 Dehalococcoides mccartyi CBDB1 isocitrate dehydrogenase YP_307531.1 347355 D 255470 CDS YP_307532.1 73748293 3623745 348514..349437 1 NC_007356.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 349437 mdh 3623745 mdh Dehalococcoides mccartyi CBDB1 malate dehydrogenase YP_307532.1 348514 D 255470 CDS YP_307533.1 73748294 3622675 349460..349831 1 NC_007356.1 hypothetical protein 349831 3622675 cbdb_A410 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307533.1 349460 D 255470 CDS YP_307534.1 73748295 3622676 349832..350674 1 NC_007356.1 Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 350674 3622676 cbdb_A411 Dehalococcoides mccartyi CBDB1 fumarate hydratase YP_307534.1 349832 D 255470 CDS YP_307535.1 73748296 3622677 350671..351243 1 NC_007356.1 fumarate hydratase subunit beta 351243 3622677 cbdb_A413 Dehalococcoides mccartyi CBDB1 fumarate hydratase subunit beta YP_307535.1 350671 D 255470 CDS YP_307536.1 73748297 3622678 351245..351586 1 NC_007356.1 HIT domain-containing protein 351586 3622678 cbdb_A415 Dehalococcoides mccartyi CBDB1 HIT domain-containing protein YP_307536.1 351245 D 255470 CDS YP_307537.1 73748298 3622679 complement(351583..352113) 1 NC_007356.1 hypothetical protein 352113 3622679 cbdb_A416 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307537.1 351583 R 255470 CDS YP_307538.1 73748299 3622680 complement(352130..352606) 1 NC_007356.1 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 352606 3622680 cbdb_A417 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_307538.1 352130 R 255470 CDS YP_307539.1 73748300 3622681 complement(352590..353444) 1 NC_007356.1 inorganic polyphosphate 353444 3622681 cbdb_A419 Dehalococcoides mccartyi CBDB1 inorganic polyphosphate YP_307539.1 352590 R 255470 CDS YP_307540.1 73748301 3622682 complement(353516..353839) 1 NC_007356.1 hypothetical protein 353839 3622682 cbdb_A420 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307540.1 353516 R 255470 CDS YP_307541.1 73748302 3622683 complement(353928..354794) 1 NC_007356.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 354794 3622683 cbdb_A423 Dehalococcoides mccartyi CBDB1 prephenate dehydrogenase YP_307541.1 353928 R 255470 CDS YP_307542.1 73748303 3623966 complement(354791..355867) 1 NC_007356.1 chorismate mutase 355867 pheA 3623966 pheA Dehalococcoides mccartyi CBDB1 chorismate mutase YP_307542.1 354791 R 255470 CDS YP_307543.1 73748304 3622644 complement(355864..356958) 1 NC_007356.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 356958 aroC 3622644 aroC Dehalococcoides mccartyi CBDB1 chorismate synthase YP_307543.1 355864 R 255470 CDS YP_307544.1 73748305 3623982 complement(356951..358213) 1 NC_007356.1 3-phosphoshikimate 1-carboxyvinyltransferase 358213 aroA 3623982 aroA Dehalococcoides mccartyi CBDB1 3-phosphoshikimate 1-carboxyvinyltransferase YP_307544.1 356951 R 255470 CDS YP_307545.1 73748306 3622648 complement(358194..358724) 1 NC_007356.1 shikimate kinase 358724 aroK 3622648 aroK Dehalococcoides mccartyi CBDB1 shikimate kinase YP_307545.1 358194 R 255470 CDS YP_307546.1 73748307 3622646 complement(358708..359568) 1 NC_007356.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 359568 aroE 3622646 aroE Dehalococcoides mccartyi CBDB1 shikimate 5-dehydrogenase YP_307546.1 358708 R 255470 CDS YP_307547.1 73748308 3622645 complement(359552..360220) 1 NC_007356.1 3-dehydroquinate dehydratase 360220 aroD 3622645 aroD Dehalococcoides mccartyi CBDB1 3-dehydroquinate dehydratase YP_307547.1 359552 R 255470 CDS YP_307548.1 73748309 3622643 complement(360217..361296) 1 NC_007356.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 361296 aroB 3622643 aroB Dehalococcoides mccartyi CBDB1 3-dehydroquinate synthase YP_307548.1 360217 R 255470 CDS YP_307549.1 73748310 3622647 complement(361316..362371) 1 NC_007356.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 362371 aroF 3622647 aroF Dehalococcoides mccartyi CBDB1 3-deoxy-7-phosphoheptulonate synthase YP_307549.1 361316 R 255470 CDS YP_307550.1 73748311 3622685 362626..362745 1 NC_007356.1 hypothetical protein 362745 3622685 cbdb_A433 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307550.1 362626 D 255470 CDS YP_307551.1 73748312 3623806 362892..363326 1 NC_007356.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 363326 rpsL 3623806 rpsL Dehalococcoides mccartyi CBDB1 30S ribosomal protein S12 YP_307551.1 362892 D 255470 CDS YP_307552.1 73748313 3623801 363340..363810 1 NC_007356.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 363810 rpsG 3623801 rpsG Dehalococcoides mccartyi CBDB1 30S ribosomal protein S7 YP_307552.1 363340 D 255470 CDS YP_307553.1 73748314 3622847 363866..365947 1 NC_007356.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 365947 fusA 3622847 fusA Dehalococcoides mccartyi CBDB1 elongation factor G YP_307553.1 363866 D 255470 CDS YP_307554.1 73748315 3623804 365972..366280 1 NC_007356.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 366280 rpsJ 3623804 rpsJ Dehalococcoides mccartyi CBDB1 30S ribosomal protein S10 YP_307554.1 365972 D 255470 CDS YP_307555.1 73748316 3623389 366289..366906 1 NC_007356.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 366906 rplC 3623389 rplC Dehalococcoides mccartyi CBDB1 50S ribosomal protein L3 YP_307555.1 366289 D 255470 CDS YP_307556.1 73748317 3623390 366909..367541 1 NC_007356.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 367541 rplD 3623390 rplD Dehalococcoides mccartyi CBDB1 50S ribosomal protein L4 YP_307556.1 366909 D 255470 CDS YP_307557.1 73748318 3623368 367554..367838 1 NC_007356.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 367838 rplW 3623368 rplW Dehalococcoides mccartyi CBDB1 50S ribosomal protein L23 YP_307557.1 367554 D 255470 CDS YP_307558.1 73748319 3623388 367864..368688 1 NC_007356.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 368688 rplB 3623388 rplB Dehalococcoides mccartyi CBDB1 50S ribosomal protein L2 YP_307558.1 367864 D 255470 CDS YP_307559.1 73748320 3623774 368695..368976 1 NC_007356.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 368976 rpsS 3623774 rpsS Dehalococcoides mccartyi CBDB1 30S ribosomal protein S19 YP_307559.1 368695 D 255470 CDS YP_307560.1 73748321 3623367 369007..369336 1 NC_007356.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 369336 rplV 3623367 rplV Dehalococcoides mccartyi CBDB1 50S ribosomal protein L22 YP_307560.1 369007 D 255470 CDS YP_307561.1 73748322 3623797 369345..370181 1 NC_007356.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 370181 rpsC 3623797 rpsC Dehalococcoides mccartyi CBDB1 30S ribosomal protein S3 YP_307561.1 369345 D 255470 CDS YP_307562.1 73748323 3623361 370183..370632 1 NC_007356.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 370632 rplP 3623361 rplP Dehalococcoides mccartyi CBDB1 50S ribosomal protein L16 YP_307562.1 370183 D 255470 CDS YP_307563.1 73748324 3623372 370634..370831 1 NC_007356.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 370831 rpmC 3623372 rpmC Dehalococcoides mccartyi CBDB1 50S ribosomal protein L29 YP_307563.1 370634 D 255470 CDS YP_307564.1 73748325 3623772 370839..371111 1 NC_007356.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 371111 rpsQ 3623772 rpsQ Dehalococcoides mccartyi CBDB1 30S ribosomal protein S17 YP_307564.1 370839 D 255470 CDS YP_307565.1 73748326 3623359 371127..371495 1 NC_007356.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 371495 rplN 3623359 rplN Dehalococcoides mccartyi CBDB1 50S ribosomal protein L14 YP_307565.1 371127 D 255470 CDS YP_307566.1 73748327 3623369 371506..371817 1 NC_007356.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 371817 rplX 3623369 rplX Dehalococcoides mccartyi CBDB1 50S ribosomal protein L24 YP_307566.1 371506 D 255470 CDS YP_307567.1 73748328 3623391 371817..372356 1 NC_007356.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 372356 rplE 3623391 rplE Dehalococcoides mccartyi CBDB1 50S ribosomal protein L5 YP_307567.1 371817 D 255470 CDS YP_307568.1 73748329 3623808 372365..372550 1 NC_007356.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 372550 rpsN 3623808 rpsN Dehalococcoides mccartyi CBDB1 30S ribosomal protein S14 YP_307568.1 372365 D 255470 CDS YP_307569.1 73748330 3623802 372584..372979 1 NC_007356.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 372979 rpsH 3623802 rpsH Dehalococcoides mccartyi CBDB1 30S ribosomal protein S8 YP_307569.1 372584 D 255470 CDS YP_307570.1 73748331 3623392 372995..373543 1 NC_007356.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 373543 rplF 3623392 rplF Dehalococcoides mccartyi CBDB1 50S ribosomal protein L6 YP_307570.1 372995 D 255470 CDS YP_307571.1 73748332 3623363 373543..373908 1 NC_007356.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 373908 rplR 3623363 rplR Dehalococcoides mccartyi CBDB1 50S ribosomal protein L18 YP_307571.1 373543 D 255470 CDS YP_307572.1 73748333 3623799 373925..374443 1 NC_007356.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 374443 rpsE 3623799 rpsE Dehalococcoides mccartyi CBDB1 30S ribosomal protein S5 YP_307572.1 373925 D 255470 CDS YP_307573.1 73748334 3623373 374436..374618 1 NC_007356.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 374618 rpmD 3623373 rpmD Dehalococcoides mccartyi CBDB1 50S ribosomal protein L30 YP_307573.1 374436 D 255470 CDS YP_307574.1 73748335 3623360 374618..375079 1 NC_007356.1 late assembly protein; 50S ribosomal protein L15 375079 rplO 3623360 rplO Dehalococcoides mccartyi CBDB1 50S ribosomal protein L15 YP_307574.1 374618 D 255470 CDS YP_307575.1 73748336 3623786 375060..376376 1 NC_007356.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 376376 secY 3623786 secY Dehalococcoides mccartyi CBDB1 preprotein translocase subunit SecY YP_307575.1 375060 D 255470 CDS YP_307576.1 73748337 3623263 376386..377036 1 NC_007356.1 adenylate kinase 377036 adk 3623263 adk Dehalococcoides mccartyi CBDB1 adenylate kinase YP_307576.1 376386 D 255470 CDS YP_307577.1 73748338 3623744 377044..377799 1 NC_007356.1 methionine aminopeptidase 377799 map 3623744 map Dehalococcoides mccartyi CBDB1 methionine aminopeptidase YP_307577.1 377044 D 255470 CDS YP_307578.1 73748339 3623985 377809..378030 1 NC_007356.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 378030 infA 3623985 infA Dehalococcoides mccartyi CBDB1 translation initiation factor IF-1 YP_307578.1 377809 D 255470 CDS YP_307579.1 73748340 3623791 378059..378172 1 NC_007356.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 378172 rpmJ 3623791 rpmJ Dehalococcoides mccartyi CBDB1 50S ribosomal protein L36 YP_307579.1 378059 D 255470 CDS YP_307580.1 73748341 3623807 378182..378571 1 NC_007356.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 378571 rpsM 3623807 rpsM Dehalococcoides mccartyi CBDB1 30S ribosomal protein S13 YP_307580.1 378182 D 255470 CDS YP_307581.1 73748342 3623805 378597..378989 1 NC_007356.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 378989 rpsK 3623805 rpsK Dehalococcoides mccartyi CBDB1 30S ribosomal protein S11 YP_307581.1 378597 D 255470 CDS YP_307582.1 73748343 3623798 378999..379622 1 NC_007356.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 379622 rpsD 3623798 rpsD Dehalococcoides mccartyi CBDB1 30S ribosomal protein S4 YP_307582.1 378999 D 255470 CDS YP_307583.1 73748344 3623792 379643..380635 1 NC_007356.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 380635 rpoA 3623792 rpoA Dehalococcoides mccartyi CBDB1 DNA-directed RNA polymerase subunit alpha YP_307583.1 379643 D 255470 CDS YP_307584.1 73748345 3623362 380666..381019 1 NC_007356.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 381019 rplQ 3623362 rplQ Dehalococcoides mccartyi CBDB1 50S ribosomal protein L17 YP_307584.1 380666 D 255470 CDS YP_307585.1 73748346 3623815 381056..381796 1 NC_007356.1 tRNA pseudouridine synthase A 381796 truA 3623815 truA Dehalococcoides mccartyi CBDB1 tRNA pseudouridine synthase A YP_307585.1 381056 D 255470 CDS YP_307586.1 73748347 3623358 381798..382229 1 NC_007356.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 382229 rplM 3623358 rplM Dehalococcoides mccartyi CBDB1 50S ribosomal protein L13 YP_307586.1 381798 D 255470 CDS YP_307587.1 73748348 3623803 382242..382640 1 NC_007356.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 382640 rpsI 3623803 rpsI Dehalococcoides mccartyi CBDB1 30S ribosomal protein S9 YP_307587.1 382242 D 255470 CDS YP_307588.1 73748349 3622687 complement(382716..382910) 1 NC_007356.1 hypothetical protein 382910 3622687 cbdb_A471 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307588.1 382716 R 255470 CDS YP_307589.1 73748350 3622688 complement(383307..384374) 1 NC_007356.1 catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate; bifunctional phosphoglucose/phosphomannose isomerase 384374 3622688 cbdb_A472 Dehalococcoides mccartyi CBDB1 bifunctional phosphoglucose/phosphomannose isomerase YP_307589.1 383307 R 255470 CDS YP_307590.1 73748351 3622689 complement(384399..385814) 1 NC_007356.1 phosphoglucomutase 385814 3622689 cbdb_A474 Dehalococcoides mccartyi CBDB1 phosphoglucomutase YP_307590.1 384399 R 255470 CDS YP_307591.1 73748352 3622690 complement(385810..386013) 1 NC_007356.1 hypothetical protein 386013 3622690 cbdb_A475 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307591.1 385810 R 255470 CDS YP_307592.1 73748353 3623748 complement(386044..387264) 1 NC_007356.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 387264 metK 3623748 metK Dehalococcoides mccartyi CBDB1 S-adenosylmethionine synthetase YP_307592.1 386044 R 255470 CDS YP_307593.1 73748354 3623264 complement(387274..388530) 1 NC_007356.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 388530 ahcY 3623264 ahcY Dehalococcoides mccartyi CBDB1 S-adenosyl-L-homocysteine hydrolase YP_307593.1 387274 R 255470 CDS YP_307594.1 73748355 3622691 complement(388538..390100) 1 NC_007356.1 hypothetical protein 390100 3622691 cbdb_A478 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307594.1 388538 R 255470 CDS YP_307595.1 73748356 3622692 complement(390100..390300) 1 NC_007356.1 hypothetical protein 390300 3622692 cbdb_A479 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307595.1 390100 R 255470 CDS YP_307596.1 73748357 3622694 complement(390297..391328) 1 NC_007356.1 hypothetical protein 391328 3622694 cbdb_A481 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307596.1 390297 R 255470 CDS YP_307597.1 73748358 3623760 complement(391321..392205) 1 NC_007356.1 methylthioadenosine phosphorylase 392205 mtaP 3623760 mtaP Dehalococcoides mccartyi CBDB1 methylthioadenosine phosphorylase YP_307597.1 391321 R 255470 CDS YP_307598.1 73748359 3622695 complement(392280..393278) 1 NC_007356.1 aIF-2BI family translation initiation factor 393278 3622695 cbdb_A484 Dehalococcoides mccartyi CBDB1 aIF-2BI family translation initiation factor YP_307598.1 392280 R 255470 CDS YP_307599.1 73748360 3622696 complement(393280..394377) 1 NC_007356.1 ABC transporter permease 394377 3622696 cbdb_A485 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307599.1 393280 R 255470 CDS YP_307600.1 73748361 3622697 complement(394374..395324) 1 NC_007356.1 daunorubicin resistance ABC transporter ATP-binding protein 395324 3622697 cbdb_A486 Dehalococcoides mccartyi CBDB1 daunorubicin resistance ABC transporter ATP-binding protein YP_307600.1 394374 R 255470 CDS YP_307601.1 73748362 3622698 395418..395840 1 NC_007356.1 hypothetical protein 395840 3622698 cbdb_A488 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307601.1 395418 D 255470 CDS YP_307602.1 73748363 3622699 395837..396250 1 NC_007356.1 hypothetical protein 396250 3622699 cbdb_A489 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307602.1 395837 D 255470 CDS YP_307603.1 73748364 3622700 complement(396237..396797) 1 NC_007356.1 acetyltransferase 396797 3622700 cbdb_A490 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_307603.1 396237 R 255470 CDS YP_307604.1 73748365 3622701 complement(396801..397751) 1 NC_007356.1 PBS lyase 397751 3622701 cbdb_A492 Dehalococcoides mccartyi CBDB1 PBS lyase YP_307604.1 396801 R 255470 CDS YP_307605.1 73748366 3622702 complement(397751..398581) 1 NC_007356.1 hypothetical protein 398581 3622702 cbdb_A493 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307605.1 397751 R 255470 CDS YP_307606.1 73748367 3622703 complement(398595..399896) 1 NC_007356.1 hypothetical protein 399896 3622703 cbdb_A494 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307606.1 398595 R 255470 CDS YP_307607.1 73748368 3622704 complement(399898..401274) 1 NC_007356.1 hypothetical protein 401274 3622704 cbdb_A496 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307607.1 399898 R 255470 CDS YP_307608.1 73748369 3623975 401412..402704 1 NC_007356.1 phosphomannomutase 402704 pmmB 3623975 pmmB Dehalococcoides mccartyi CBDB1 phosphomannomutase YP_307608.1 401412 D 255470 CDS YP_307609.1 73748370 3623411 402706..403908 1 NC_007356.1 glucose-1-phosphate thymidylyltransferase 403908 rfbA 3623411 rfbA Dehalococcoides mccartyi CBDB1 glucose-1-phosphate thymidylyltransferase YP_307609.1 402706 D 255470 CDS YP_307610.1 73748371 3622706 403926..405107 1 NC_007356.1 glucose-1-phosphate thymidylyltransferase 405107 3622706 cbdb_A500 Dehalococcoides mccartyi CBDB1 glucose-1-phosphate thymidylyltransferase YP_307610.1 403926 D 255470 CDS YP_307611.1 73748372 3623600 405108..406889 1 NC_007356.1 glucosamine--fructose-6-phosphate aminotransferase 406889 glmS 3623600 glmS Dehalococcoides mccartyi CBDB1 glucosamine--fructose-6-phosphate aminotransferase YP_307611.1 405108 D 255470 CDS YP_307612.1 73748373 3622707 complement(406897..407349) 1 NC_007356.1 phosphatidylethanolamine-binding protein 407349 3622707 cbdb_A504 Dehalococcoides mccartyi CBDB1 phosphatidylethanolamine-binding protein YP_307612.1 406897 R 255470 CDS YP_307613.1 73748374 3622708 complement(407361..408065) 1 NC_007356.1 HAD family hydrolase 408065 3622708 cbdb_A505 Dehalococcoides mccartyi CBDB1 HAD family hydrolase YP_307613.1 407361 R 255470 CDS YP_307614.1 73748375 3624009 408204..409508 1 NC_007356.1 diaminopimelate decarboxylase 409508 lysA 3624009 lysA Dehalococcoides mccartyi CBDB1 diaminopimelate decarboxylase YP_307614.1 408204 D 255470 CDS YP_307615.1 73748376 3623903 409522..410553 1 NC_007356.1 DNA polymerase III subunit delta' 410553 holB 3623903 holB Dehalococcoides mccartyi CBDB1 DNA polymerase III subunit delta' YP_307615.1 409522 D 255470 CDS YP_307616.1 73748377 3622709 410546..411379 1 NC_007356.1 hypothetical protein 411379 3622709 cbdb_A510 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307616.1 410546 D 255470 CDS YP_307617.1 73748378 3622710 complement(411368..411898) 1 NC_007356.1 HNH endonuclease domain-containing protein 411898 3622710 cbdb_A511 Dehalococcoides mccartyi CBDB1 HNH endonuclease domain-containing protein YP_307617.1 411368 R 255470 CDS YP_307618.1 73748379 3622711 complement(411970..413277) 1 NC_007356.1 ATP-binding protein 413277 3622711 cbdb_A512 Dehalococcoides mccartyi CBDB1 ATP-binding protein YP_307618.1 411970 R 255470 CDS YP_307619.1 73748380 3622712 complement(413303..414013) 1 NC_007356.1 hypothetical protein 414013 3622712 cbdb_A513 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307619.1 413303 R 255470 CDS YP_307620.1 73748381 3623178 complement(414010..415386) 1 NC_007356.1 replicative DNA helicase 415386 dnaB 3623178 dnaB Dehalococcoides mccartyi CBDB1 replicative DNA helicase YP_307620.1 414010 R 255470 CDS YP_307621.1 73748382 3623393 complement(415387..415842) 1 NC_007356.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 415842 rplI 3623393 rplI Dehalococcoides mccartyi CBDB1 50S ribosomal protein L9 YP_307621.1 415387 R 255470 CDS YP_307622.1 73748383 3623818 complement(415912..416832) 1 NC_007356.1 thioredoxin reductase 416832 trxB 3623818 trxB Dehalococcoides mccartyi CBDB1 thioredoxin reductase YP_307622.1 415912 R 255470 CDS YP_307623.1 73748384 3623974 complement(416813..417856) 1 NC_007356.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 417856 plsX 3623974 plsX Dehalococcoides mccartyi CBDB1 glycerol-3-phosphate acyltransferase PlsX YP_307623.1 416813 R 255470 CDS YP_307624.1 73748385 3622713 complement(417896..418747) 1 NC_007356.1 activator of 2-hydroxyglutaryl-CoA dehydratase 418747 3622713 cbdb_A519 Dehalococcoides mccartyi CBDB1 activator of 2-hydroxyglutaryl-CoA dehydratase YP_307624.1 417896 R 255470 CDS YP_307625.1 73748386 3622715 complement(418773..419966) 1 NC_007356.1 amidohydrolase 419966 3622715 cbdb_A520 Dehalococcoides mccartyi CBDB1 amidohydrolase YP_307625.1 418773 R 255470 CDS YP_307626.1 73748387 3623824 420180..423014 1 NC_007356.1 excinuclease ABC subunit A 423014 uvrA 3623824 uvrA Dehalococcoides mccartyi CBDB1 excinuclease ABC subunit A YP_307626.1 420180 D 255470 CDS YP_307627.1 73748388 3622716 423088..423639 1 NC_007356.1 HDIG domain-containing protein 423639 3622716 cbdb_A522 Dehalococcoides mccartyi CBDB1 HDIG domain-containing protein YP_307627.1 423088 D 255470 CDS YP_307628.1 73748389 3622717 423748..423951 1 NC_007356.1 DNA-binding protein 423951 3622717 cbdb_A523 Dehalococcoides mccartyi CBDB1 DNA-binding protein YP_307628.1 423748 D 255470 CDS YP_307629.1 73748390 3622718 complement(423948..426527) 1 NC_007356.1 exonuclease SbcC 426527 3622718 cbdb_A524 Dehalococcoides mccartyi CBDB1 exonuclease SbcC YP_307629.1 423948 R 255470 CDS YP_307630.1 73748391 3623795 complement(426698..428260) 1 NC_007356.1 RNA polymerase, sigma factor 428260 rpoD 3623795 rpoD Dehalococcoides mccartyi CBDB1 RNA polymerase, sigma factor YP_307630.1 426698 R 255470 CDS YP_307631.1 73748392 3623180 complement(428261..430027) 1 NC_007356.1 DNA primase 430027 dnaG 3623180 dnaG Dehalococcoides mccartyi CBDB1 DNA primase YP_307631.1 428261 R 255470 CDS YP_307632.1 73748393 3622719 complement(430029..431066) 1 NC_007356.1 dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 431066 3622719 cbdb_A528 Dehalococcoides mccartyi CBDB1 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_307632.1 430029 R 255470 CDS YP_307633.1 73748394 3623726 complement(431063..433339) 1 NC_007356.1 phosphoenolpyruvate synthase 433339 ppsA 3623726 ppsA Dehalococcoides mccartyi CBDB1 phosphoenolpyruvate synthase YP_307633.1 431063 R 255470 CDS YP_307634.1 73748395 3622720 433637..434206 1 NC_007356.1 hypothetical protein 434206 3622720 cbdb_A530 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307634.1 433637 D 255470 CDS YP_307635.1 73748396 3622721 434264..434497 1 NC_007356.1 hypothetical protein 434497 3622721 cbdb_A531 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307635.1 434264 D 255470 CDS YP_307636.1 73748397 3622655 434500..435444 1 NC_007356.1 ATP synthase F0 subunit A 435444 atpB 3622655 atpB Dehalococcoides mccartyi CBDB1 ATP synthase F0 subunit A YP_307636.1 434500 D 255470 CDS YP_307637.1 73748398 3623595 435485..435715 1 NC_007356.1 ATP synthase F0 subunit C 435715 atpE 3623595 atpE Dehalococcoides mccartyi CBDB1 ATP synthase F0 subunit C YP_307637.1 435485 D 255470 CDS YP_307638.1 73748399 3623596 435740..436249 1 NC_007356.1 ATP synthase F0 subunit B 436249 atpF 3623596 atpF Dehalococcoides mccartyi CBDB1 ATP synthase F0 subunit B YP_307638.1 435740 D 255470 CDS YP_307639.1 73748400 3622767 436270..436812 1 NC_007356.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 436812 atpH 3622767 atpH Dehalococcoides mccartyi CBDB1 ATP synthase F0F1 subunit delta YP_307639.1 436270 D 255470 CDS YP_307640.1 73748401 3622654 436835..438346 1 NC_007356.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 438346 atpA 3622654 atpA Dehalococcoides mccartyi CBDB1 ATP synthase F0F1 subunit alpha YP_307640.1 436835 D 255470 CDS YP_307641.1 73748402 3622766 438371..439228 1 NC_007356.1 ATP synthase F1 subunit gamma 439228 atpG 3622766 atpG Dehalococcoides mccartyi CBDB1 ATP synthase F1 subunit gamma YP_307641.1 438371 D 255470 CDS YP_307642.1 73748403 3623594 439244..440638 1 NC_007356.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 440638 atpD 3623594 atpD Dehalococcoides mccartyi CBDB1 ATP synthase F0F1 subunit beta YP_307642.1 439244 D 255470 CDS YP_307643.1 73748404 3623549 440663..441085 1 NC_007356.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 441085 atpC 3623549 atpC Dehalococcoides mccartyi CBDB1 ATP synthase F0F1 subunit epsilon YP_307643.1 440663 D 255470 CDS YP_307644.1 73748405 3623381 complement(441160..441660) 1 NC_007356.1 16S rRNA-processing protein RimM 441660 rimM 3623381 rimM Dehalococcoides mccartyi CBDB1 16S rRNA-processing protein RimM YP_307644.1 441160 R 255470 CDS YP_307645.1 73748406 3622723 complement(441748..441975) 1 NC_007356.1 hypothetical protein 441975 3622723 cbdb_A541 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307645.1 441748 R 255470 CDS YP_307646.1 73748407 3623771 complement(441991..442239) 1 NC_007356.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 442239 rpsP 3623771 rpsP Dehalococcoides mccartyi CBDB1 30S ribosomal protein S16 YP_307646.1 441991 R 255470 CDS YP_307647.1 73748408 3623680 442384..443055 1 NC_007356.1 endonuclease V 443055 nfi 3623680 nfi Dehalococcoides mccartyi CBDB1 endonuclease V YP_307647.1 442384 D 255470 CDS YP_307648.1 73748409 3623729 443182..444252 1 NC_007356.1 peptide chain release factor 2 444252 prfB 3623729 prfB Dehalococcoides mccartyi CBDB1 peptide chain release factor 2 YP_307648.1 443182 D 255470 CDS YP_307649.1 73748410 3622724 444252..445478 1 NC_007356.1 hypothetical protein 445478 3622724 cbdb_A545 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307649.1 444252 D 255470 CDS YP_307650.1 73748411 3622725 445489..446148 1 NC_007356.1 RadC family DNA repair protein 446148 3622725 cbdb_A546 Dehalococcoides mccartyi CBDB1 RadC family DNA repair protein YP_307650.1 445489 D 255470 CDS YP_307651.1 73748412 3622726 446151..447743 1 NC_007356.1 dipeptide/oligopeptide/nickel ABC transporter periplasmic protein 447743 3622726 cbdb_A547 Dehalococcoides mccartyi CBDB1 dipeptide/oligopeptide/nickel ABC transporter periplasmic protein YP_307651.1 446151 D 255470 CDS YP_307652.1 73748413 3622727 complement(448219..448503) 1 NC_007356.1 hypothetical protein 448503 3622727 cbdb_A549 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307652.1 448219 R 255470 CDS YP_307653.1 73748414 3622729 complement(448760..449902) 1 NC_007356.1 classes I and II aminotransferase 449902 3622729 cbdb_A553 Dehalococcoides mccartyi CBDB1 classes I and II aminotransferase YP_307653.1 448760 R 255470 CDS YP_307654.1 73748415 3623788 complement(449918..451159) 1 NC_007356.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 451159 serS 3623788 serS Dehalococcoides mccartyi CBDB1 seryl-tRNA synthetase YP_307654.1 449918 R 255470 CDS YP_307655.1 73748416 3623742 complement(451191..452687) 1 NC_007356.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 452687 lysS 3623742 lysS Dehalococcoides mccartyi CBDB1 lysyl-tRNA synthetase YP_307655.1 451191 R 255470 CDS YP_307656.1 73748417 3622730 452917..453096 1 NC_007356.1 hypothetical protein 453096 3622730 cbdb_A556 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307656.1 452917 D 255470 CDS YP_307657.1 73748418 3623407 complement(453110..453871) 1 NC_007356.1 recombination protein RecO 453871 recO 3623407 recO Dehalococcoides mccartyi CBDB1 recombination protein RecO YP_307657.1 453110 R 255470 CDS YP_307658.1 73748419 3622731 complement(453872..453967) 1 NC_007356.1 hypothetical protein 453967 3622731 cbdb_A558 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307658.1 453872 R 255470 CDS YP_307659.1 73748420 3622732 complement(453970..454692) 1 NC_007356.1 hypothetical protein 454692 3622732 cbdb_A559 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307659.1 453970 R 255470 CDS YP_307660.1 73748421 3623163 complement(454694..455758) 1 NC_007356.1 magnesium and cobalt transport protein CorA 455758 corA 3623163 corA Dehalococcoides mccartyi CBDB1 magnesium and cobalt transport protein CorA YP_307660.1 454694 R 255470 CDS YP_307661.1 73748422 3623408 complement(455797..456411) 1 NC_007356.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 456411 recR 3623408 recR Dehalococcoides mccartyi CBDB1 recombination protein RecR YP_307661.1 455797 R 255470 CDS YP_307662.1 73748423 3622734 complement(456433..456732) 1 NC_007356.1 hypothetical protein 456732 3622734 cbdb_A562 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307662.1 456433 R 255470 CDS YP_307663.1 73748424 3623184 complement(456742..458454) 1 NC_007356.1 DNA polymerase III subunits gamma and tau 458454 dnaX 3623184 dnaX Dehalococcoides mccartyi CBDB1 DNA polymerase III subunits gamma and tau YP_307663.1 456742 R 255470 CDS YP_307664.1 73748425 3622735 complement(458555..458815) 1 NC_007356.1 hypothetical protein 458815 3622735 cbdb_A564 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307664.1 458555 R 255470 CDS YP_307665.1 73748426 3622736 complement(458846..459268) 1 NC_007356.1 hypothetical protein 459268 3622736 cbdb_A565 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307665.1 458846 R 255470 CDS YP_307666.1 73748427 3622737 complement(459284..459568) 1 NC_007356.1 hypothetical protein 459568 3622737 cbdb_A566 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307666.1 459284 R 255470 CDS YP_307667.1 73748428 3622738 complement(459568..459942) 1 NC_007356.1 hypothetical protein 459942 3622738 cbdb_A567 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307667.1 459568 R 255470 CDS YP_307668.1 73748429 3622739 complement(460149..461327) 1 NC_007356.1 GTPase domain-containing protein 461327 3622739 cbdb_A568 Dehalococcoides mccartyi CBDB1 GTPase domain-containing protein YP_307668.1 460149 R 255470 CDS YP_307669.1 73748430 3622848 complement(461415..462422) 1 NC_007356.1 glyceraldehyde-3-phosphate dehydrogenase 462422 gap 3622848 gap Dehalococcoides mccartyi CBDB1 glyceraldehyde-3-phosphate dehydrogenase YP_307669.1 461415 R 255470 CDS YP_307670.1 73748431 3622740 complement(462444..463463) 1 NC_007356.1 hypothetical protein 463463 3622740 cbdb_A570 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307670.1 462444 R 255470 CDS YP_307671.1 73748432 3622741 complement(463460..464278) 1 NC_007356.1 hypothetical protein 464278 3622741 cbdb_A571 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307671.1 463460 R 255470 CDS YP_307672.1 73748433 3623282 complement(464294..465580) 1 NC_007356.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 465580 eno 3623282 eno Dehalococcoides mccartyi CBDB1 phosphopyruvate hydratase YP_307672.1 464294 R 255470 CDS YP_307673.1 73748434 3622742 complement(465599..466078) 1 NC_007356.1 hypothetical protein 466078 3622742 cbdb_A574 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307673.1 465599 R 255470 CDS YP_307674.1 73748435 3623738 complement(466126..466695) 1 NC_007356.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 466695 pth 3623738 pth Dehalococcoides mccartyi CBDB1 peptidyl-tRNA hydrolase YP_307674.1 466126 R 255470 CDS YP_307675.1 73748436 3624007 complement(466695..468728) 1 NC_007356.1 NAD-dependent DNA ligase 468728 ligA 3624007 ligA Dehalococcoides mccartyi CBDB1 NAD-dependent DNA ligase YP_307675.1 466695 R 255470 CDS YP_307676.1 73748437 3622743 468873..470201 1 NC_007356.1 hypothetical protein 470201 3622743 cbdb_A578 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307676.1 468873 D 255470 CDS YP_307677.1 73748438 3622744 complement(470272..470859) 1 NC_007356.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 470859 3622744 cbdb_A579 Dehalococcoides mccartyi CBDB1 glutamine amidotransferase subunit PdxT YP_307677.1 470272 R 255470 CDS YP_307678.1 73748439 3623787 complement(470934..472514) 1 NC_007356.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 472514 serA 3623787 serA Dehalococcoides mccartyi CBDB1 D-3-phosphoglycerate dehydrogenase YP_307678.1 470934 R 255470 CDS YP_307679.1 73748440 3622746 complement(472516..473604) 1 NC_007356.1 soluble hydrogenase, tritium exchange subunit 473604 3622746 cbdb_A581 Dehalococcoides mccartyi CBDB1 soluble hydrogenase, tritium exchange subunit YP_307679.1 472516 R 255470 CDS YP_307680.1 73748441 3623822 complement(473664..474854) 1 NC_007356.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 474854 tyrS 3623822 tyrS Dehalococcoides mccartyi CBDB1 tyrosyl-tRNA synthetase YP_307680.1 473664 R 255470 CDS YP_307681.1 73748442 3623377 complement(474861..475778) 1 NC_007356.1 riboflavin biosynthesis protein RibF 475778 ribF 3623377 ribF Dehalococcoides mccartyi CBDB1 riboflavin biosynthesis protein RibF YP_307681.1 474861 R 255470 CDS YP_307682.1 73748443 3623793 476185..480006 1 NC_007356.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 480006 rpoB 3623793 rpoB Dehalococcoides mccartyi CBDB1 DNA-directed RNA polymerase subunit beta YP_307682.1 476185 D 255470 CDS YP_307683.1 73748444 3623794 479993..483880 1 NC_007356.1 DNA-directed RNA polymerase subunit beta' 483880 rpoC 3623794 rpoC Dehalococcoides mccartyi CBDB1 DNA-directed RNA polymerase subunit beta' YP_307683.1 479993 D 255470 CDS YP_307684.1 73748445 3623778 484087..485136 1 NC_007356.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 485136 ruvB 3623778 ruvB Dehalococcoides mccartyi CBDB1 Holliday junction DNA helicase RuvB YP_307684.1 484087 D 255470 CDS YP_307685.1 73748446 3622747 485126..485674 1 NC_007356.1 hypothetical protein 485674 3622747 cbdb_A589 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307685.1 485126 D 255470 CDS YP_307686.1 73748447 3623379 485751..486392 1 NC_007356.1 ribosomal-protein-alanine acetyltransferase 486392 rimI 3623379 rimI Dehalococcoides mccartyi CBDB1 ribosomal-protein-alanine acetyltransferase YP_307686.1 485751 D 255470 CDS YP_307687.1 73748448 3622749 complement(486409..486636) 1 NC_007356.1 hypothetical protein 486636 3622749 cbdb_A592 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307687.1 486409 R 255470 CDS YP_307688.1 73748449 3622656 complement(486701..487240) 1 NC_007356.1 hypothetical protein 487240 3622656 cbdb_A593 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307688.1 486701 R 255470 CDS YP_307689.1 73748450 3622657 complement(487269..487943) 1 NC_007356.1 hypothetical protein 487943 3622657 cbdb_A594 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307689.1 487269 R 255470 CDS YP_307690.1 73748451 3622658 487987..489366 1 NC_007356.1 ELP3 family histone acetyltransferase 489366 3622658 cbdb_A595 Dehalococcoides mccartyi CBDB1 ELP3 family histone acetyltransferase YP_307690.1 487987 D 255470 CDS YP_307691.1 73748452 3622762 489582..490520 1 NC_007356.1 hydrogenase 3 subunit VhuG 490520 3622762 cbdb_A596 Dehalococcoides mccartyi CBDB1 hydrogenase 3 subunit VhuG YP_307691.1 489582 D 255470 CDS YP_307692.1 73748453 3622776 490552..491991 1 NC_007356.1 hydrogenase 3 subunit VhuA 491991 3622776 cbdb_A597 Dehalococcoides mccartyi CBDB1 hydrogenase 3 subunit VhuA YP_307692.1 490552 D 255470 CDS YP_307693.1 73748454 3622777 491994..492497 1 NC_007356.1 hydrogenase maturation protease 492497 3622777 cbdb_A598 Dehalococcoides mccartyi CBDB1 hydrogenase maturation protease YP_307693.1 491994 D 255470 CDS YP_307694.1 73748455 3622778 complement(492494..492799) 1 NC_007356.1 hypothetical protein 492799 3622778 cbdb_A599 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307694.1 492494 R 255470 CDS YP_307695.1 73748456 3622779 complement(492817..493356) 1 NC_007356.1 thiol-disulfide oxidoreductase 493356 3622779 cbdb_A600 Dehalococcoides mccartyi CBDB1 thiol-disulfide oxidoreductase YP_307695.1 492817 R 255470 CDS YP_307696.1 73748457 3622774 complement(493358..494080) 1 NC_007356.1 cytochrome c-type biogenesis protein CcdA 494080 ccdA 3622774 ccdA Dehalococcoides mccartyi CBDB1 cytochrome c-type biogenesis protein CcdA YP_307696.1 493358 R 255470 CDS YP_307697.1 73748458 3622780 494143..495282 1 NC_007356.1 hypothetical protein 495282 3622780 cbdb_A602 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307697.1 494143 D 255470 CDS YP_307698.1 73748459 3622781 495303..495791 1 NC_007356.1 hypothetical protein 495791 3622781 cbdb_A604 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307698.1 495303 D 255470 CDS YP_307699.1 73748460 3623426 495989..496738 1 NC_007356.1 radical SAM domain-containing protein 496738 rdhI 3623426 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_307699.1 495989 D 255470 CDS YP_307700.1 73748461 3623684 496739..498538 1 NC_007356.1 ribonucleotide reductase 498538 nrd 3623684 nrd Dehalococcoides mccartyi CBDB1 ribonucleotide reductase YP_307700.1 496739 D 255470 CDS YP_307701.1 73748462 3622782 complement(498581..499540) 1 NC_007356.1 response regulator 499540 3622782 cbdb_A610 Dehalococcoides mccartyi CBDB1 response regulator YP_307701.1 498581 R 255470 CDS YP_307702.1 73748463 3622783 complement(499570..502128) 1 NC_007356.1 sensor histidine kinase 502128 3622783 cbdb_A612 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307702.1 499570 R 255470 CDS YP_307703.1 73748464 3622784 complement(502304..502636) 1 NC_007356.1 hypothetical protein 502636 3622784 cbdb_A613 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307703.1 502304 R 255470 CDS YP_307704.1 73748465 3622785 502718..503983 1 NC_007356.1 hypothetical protein 503983 3622785 cbdb_A614 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307704.1 502718 D 255470 CDS YP_307705.1 73748466 3623996 504126..505445 1 NC_007356.1 lysine 2,3-aminomutase 505445 kamA 3623996 kamA Dehalococcoides mccartyi CBDB1 lysine 2,3-aminomutase YP_307705.1 504126 D 255470 CDS YP_307706.1 73748467 3623173 505417..506433 1 NC_007356.1 D-alanine--D-alanine ligase 506433 ddl 3623173 ddl Dehalococcoides mccartyi CBDB1 D-alanine--D-alanine ligase YP_307706.1 505417 D 255470 CDS YP_307707.1 73748468 3622786 506564..506995 1 NC_007356.1 FUR family transcriptional regulator 506995 3622786 cbdb_A617 Dehalococcoides mccartyi CBDB1 FUR family transcriptional regulator YP_307707.1 506564 D 255470 CDS YP_307708.1 73748469 3622787 506992..507864 1 NC_007356.1 cation ABC transporter periplasmc-binding protein 507864 3622787 cbdb_A618 Dehalococcoides mccartyi CBDB1 cation ABC transporter periplasmc-binding protein YP_307708.1 506992 D 255470 CDS YP_307709.1 73748470 3622788 507867..508631 1 NC_007356.1 cation ABC transporter ATP-binding protein 508631 3622788 cbdb_A619 Dehalococcoides mccartyi CBDB1 cation ABC transporter ATP-binding protein YP_307709.1 507867 D 255470 CDS YP_307710.1 73748471 3622790 508628..509473 1 NC_007356.1 cation ABC transporter permease 509473 3622790 cbdb_A620 Dehalococcoides mccartyi CBDB1 cation ABC transporter permease YP_307710.1 508628 D 255470 CDS YP_307711.1 73748472 3622791 complement(509497..509847) 1 NC_007356.1 hypothetical protein 509847 3622791 cbdb_A621 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307711.1 509497 R 255470 CDS YP_307712.1 73748473 3622845 complement(509963..511093) 1 NC_007356.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 511093 ftsZ 3622845 ftsZ Dehalococcoides mccartyi CBDB1 cell division protein FtsZ YP_307712.1 509963 R 255470 CDS YP_307713.1 73748474 3622841 complement(511126..512328) 1 NC_007356.1 cell division protein FtsA 512328 ftsA 3622841 ftsA Dehalococcoides mccartyi CBDB1 cell division protein FtsA YP_307713.1 511126 R 255470 CDS YP_307714.1 73748475 3622792 512836..513525 1 NC_007356.1 hypothetical protein 513525 3622792 cbdb_A624 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307714.1 512836 D 255470 CDS YP_307715.1 73748476 3622793 513682..514545 1 NC_007356.1 universal stress protein 514545 3622793 cbdb_A625 Dehalococcoides mccartyi CBDB1 universal stress protein YP_307715.1 513682 D 255470 CDS YP_307716.1 73748477 3622794 514599..515228 1 NC_007356.1 cyclase 515228 3622794 cbdb_A626 Dehalococcoides mccartyi CBDB1 cyclase YP_307716.1 514599 D 255470 CDS YP_307717.1 73748478 3622795 515229..515891 1 NC_007356.1 ribulose-phosphate 3-epimerase 515891 3622795 cbdb_A627 Dehalococcoides mccartyi CBDB1 ribulose-phosphate 3-epimerase YP_307717.1 515229 D 255470 CDS YP_307718.1 73748479 3623386 complement(515888..516346) 1 NC_007356.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 516346 rpiB 3623386 rpiB Dehalococcoides mccartyi CBDB1 ribose-5-phosphate isomerase B YP_307718.1 515888 R 255470 CDS YP_307719.1 73748480 3624025 complement(516339..518339) 1 NC_007356.1 transketolase 518339 tkt 3624025 tkt Dehalococcoides mccartyi CBDB1 transketolase YP_307719.1 516339 R 255470 CDS YP_307720.1 73748481 3622797 complement(518391..518900) 1 NC_007356.1 nitroreductase 518900 3622797 cbdb_A630 Dehalococcoides mccartyi CBDB1 nitroreductase YP_307720.1 518391 R 255470 CDS YP_307721.1 73748482 3622798 519026..519868 1 NC_007356.1 hypothetical protein 519868 3622798 cbdb_A631 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307721.1 519026 D 255470 CDS YP_307722.1 73748483 3622799 520049..520639 1 NC_007356.1 hypothetical protein 520639 3622799 cbdb_A632 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307722.1 520049 D 255470 CDS YP_307723.1 73748484 3623290 521245..522258 1 NC_007356.1 cobalamin/Fe3+-siderophores ABC transporter periplasmic protein 522258 fecB 3623290 fecB Dehalococcoides mccartyi CBDB1 cobalamin/Fe3+-siderophores ABC transporter periplasmic protein YP_307723.1 521245 D 255470 CDS YP_307724.1 73748485 3623291 522314..523405 1 NC_007356.1 cobalamin/Fe3+-siderophores ABC transporter permease 523405 fecD 3623291 fecD Dehalococcoides mccartyi CBDB1 cobalamin/Fe3+-siderophores ABC transporter permease YP_307724.1 522314 D 255470 CDS YP_307725.1 73748486 3623294 523417..524244 1 NC_007356.1 cobalamin/Fe3+-siderophores ABC transporter ATPase 524244 fepC 3623294 fepC Dehalococcoides mccartyi CBDB1 cobalamin/Fe3+-siderophores ABC transporter ATPase YP_307725.1 523417 D 255470 CDS YP_307726.1 73748487 3623121 524234..525004 1 NC_007356.1 hypothetical protein 525004 rdhF 3623121 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307726.1 524234 D 255470 CDS YP_307727.1 73748488 3622773 525007..525933 1 NC_007356.1 cobalamin biosynthesis protein 525933 cbiB 3622773 cbiB Dehalococcoides mccartyi CBDB1 cobalamin biosynthesis protein YP_307727.1 525007 D 255470 CDS YP_307728.1 73748489 3623154 525917..527023 1 NC_007356.1 threonine-phosphate decarboxylase 527023 cobD 3623154 cobD Dehalococcoides mccartyi CBDB1 threonine-phosphate decarboxylase YP_307728.1 525917 D 255470 CDS YP_307729.1 73748490 3623157 527396..528454 1 NC_007356.1 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 528454 cobT 3623157 cobT Dehalococcoides mccartyi CBDB1 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_307729.1 527396 D 255470 CDS YP_307730.1 73748491 3623156 528494..529258 1 NC_007356.1 cobalamin 5'-phosphate synthase 529258 cobS 3623156 cobS Dehalococcoides mccartyi CBDB1 cobalamin 5'-phosphate synthase YP_307730.1 528494 D 255470 CDS YP_307731.1 73748492 3623151 529277..529879 1 NC_007356.1 alpha-ribazole-5'-phosphate phosphatase 529879 cobC 3623151 cobC Dehalococcoides mccartyi CBDB1 alpha-ribazole-5'-phosphate phosphatase YP_307731.1 529277 D 255470 CDS YP_307732.1 73748493 3623158 529933..530499 1 NC_007356.1 cobinamide kinase 530499 cobU 3623158 cobU Dehalococcoides mccartyi CBDB1 cobinamide kinase YP_307732.1 529933 D 255470 CDS YP_307733.1 73748494 3623817 complement(530575..530898) 1 NC_007356.1 thioredoxin 530898 trx 3623817 trx Dehalococcoides mccartyi CBDB1 thioredoxin YP_307733.1 530575 R 255470 CDS YP_307734.1 73748495 3622800 complement(531068..532213) 1 NC_007356.1 sensor histidine kinase 532213 3622800 cbdb_A646 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_307734.1 531068 R 255470 CDS YP_307735.1 73748496 3622801 complement(532230..532904) 1 NC_007356.1 LuxR family transcriptional regulator 532904 3622801 cbdb_A647 Dehalococcoides mccartyi CBDB1 LuxR family transcriptional regulator YP_307735.1 532230 R 255470 CDS YP_307736.1 73748497 3622802 complement(532974..533618) 1 NC_007356.1 hypothetical protein 533618 3622802 cbdb_A649 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307736.1 532974 R 255470 CDS YP_307737.1 73748498 3623259 complement(533650..534996) 1 NC_007356.1 part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit gamma 534996 acsC 3623259 acsC Dehalococcoides mccartyi CBDB1 acetyl-CoA decarbonylase/synthase complex subunit gamma YP_307737.1 533650 R 255470 CDS YP_307738.1 73748499 3623159 complement(535017..537218) 1 NC_007356.1 in acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta 537218 codH 3623159 codH Dehalococcoides mccartyi CBDB1 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta YP_307738.1 535017 R 255470 CDS YP_307739.1 73748500 3623260 complement(537278..538219) 1 NC_007356.1 part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit delta 538219 acsD 3623260 acsD Dehalococcoides mccartyi CBDB1 acetyl-CoA decarbonylase/synthase complex subunit delta YP_307739.1 537278 R 255470 CDS YP_307740.1 73748501 3622835 complement(538255..539145) 1 NC_007356.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 539145 folD 3622835 folD Dehalococcoides mccartyi CBDB1 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_307740.1 538255 R 255470 CDS YP_307741.1 73748502 3623261 complement(539145..539927) 1 NC_007356.1 carbon monoxide dehydrogenase nickel-insertion accessory protein 539927 acsF 3623261 acsF Dehalococcoides mccartyi CBDB1 carbon monoxide dehydrogenase nickel-insertion accessory protein YP_307741.1 539145 R 255470 CDS YP_307742.1 73748503 3622803 complement(539924..541846) 1 NC_007356.1 iron-sulfur cluster binding protein 541846 3622803 cbdb_A659 Dehalococcoides mccartyi CBDB1 iron-sulfur cluster binding protein YP_307742.1 539924 R 255470 CDS YP_307743.1 73748504 3623295 complement(541884..543677) 1 NC_007356.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 543677 fhs 3623295 fhs Dehalococcoides mccartyi CBDB1 formate--tetrahydrofolate ligase YP_307743.1 541884 R 255470 CDS YP_307744.1 73748505 3622804 543808..544389 1 NC_007356.1 hypothetical protein 544389 3622804 cbdb_A661 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307744.1 543808 D 255470 CDS YP_307745.1 73748506 3622805 544508..544687 1 NC_007356.1 hypothetical protein 544687 3622805 cbdb_A662 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307745.1 544508 D 255470 CDS YP_307746.1 73748507 3622653 544764..546560 1 NC_007356.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 546560 aspS 3622653 aspS Dehalococcoides mccartyi CBDB1 aspartyl-tRNA synthetase YP_307746.1 544764 D 255470 CDS YP_307747.1 73748508 3624024 546580..547923 1 NC_007356.1 trigger factor 547923 tig 3624024 tig Dehalococcoides mccartyi CBDB1 trigger factor YP_307747.1 546580 D 255470 CDS YP_307748.1 73748509 3623654 547920..548522 1 NC_007356.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 548522 clpP 3623654 clpP Dehalococcoides mccartyi CBDB1 ATP-dependent Clp protease proteolytic subunit YP_307748.1 547920 D 255470 CDS YP_307749.1 73748510 3622806 complement(548603..549589) 1 NC_007356.1 carbohydrate kinase 549589 3622806 cbdb_A667 Dehalococcoides mccartyi CBDB1 carbohydrate kinase YP_307749.1 548603 R 255470 CDS YP_307750.1 73748511 3622807 complement(549591..550412) 1 NC_007356.1 phosphoribosylglycinamide transformylase 550412 3622807 cbdb_A668 Dehalococcoides mccartyi CBDB1 phosphoribosylglycinamide transformylase YP_307750.1 549591 R 255470 CDS YP_307751.1 73748512 3622808 complement(550415..551074) 1 NC_007356.1 phosphotransferase domain-containing protein 551074 3622808 cbdb_A669 Dehalococcoides mccartyi CBDB1 phosphotransferase domain-containing protein YP_307751.1 550415 R 255470 CDS YP_307752.1 73748513 3623279 complement(551077..551637) 1 NC_007356.1 translation elongation factor P 551637 efp 3623279 efp Dehalococcoides mccartyi CBDB1 translation elongation factor P YP_307752.1 551077 R 255470 CDS YP_307753.1 73748514 3622810 complement(551653..552744) 1 NC_007356.1 M24 family metallopeptidase 552744 3622810 cbdb_A671 Dehalococcoides mccartyi CBDB1 M24 family metallopeptidase YP_307753.1 551653 R 255470 CDS YP_307754.1 73748515 3623828 complement(552741..553664) 1 NC_007356.1 tyrosine recombinase XerC 553664 xerC 3623828 xerC Dehalococcoides mccartyi CBDB1 tyrosine recombinase XerC YP_307754.1 552741 R 255470 CDS YP_307755.1 73748516 3624027 complement(553665..555776) 1 NC_007356.1 DNA topoisomerase I 555776 topA 3624027 topA Dehalococcoides mccartyi CBDB1 DNA topoisomerase I YP_307755.1 553665 R 255470 CDS YP_307756.1 73748517 3622811 complement(555783..556934) 1 NC_007356.1 DNA processing protein DprA 556934 3622811 cbdb_A675 Dehalococcoides mccartyi CBDB1 DNA processing protein DprA YP_307756.1 555783 R 255470 CDS YP_307757.1 73748518 3622812 557369..557545 1 NC_007356.1 hypothetical protein 557545 3622812 cbdb_A676 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307757.1 557369 D 255470 CDS YP_307758.1 73748519 3623598 557675..558958 1 NC_007356.1 antiporter GerN 558958 gerN 3623598 gerN Dehalococcoides mccartyi CBDB1 antiporter GerN YP_307758.1 557675 D 255470 CDS YP_307759.1 73748520 3623723 559100..559672 1 NC_007356.1 pyruvic-ferredoxin oxidoreductase subunit gamma 559672 porG 3623723 porG Dehalococcoides mccartyi CBDB1 pyruvic-ferredoxin oxidoreductase subunit gamma YP_307759.1 559100 D 255470 CDS YP_307760.1 73748521 3623722 559701..559961 1 NC_007356.1 pyruvic-ferredoxin oxidoreductase subunit delta 559961 porD 3623722 porD Dehalococcoides mccartyi CBDB1 pyruvic-ferredoxin oxidoreductase subunit delta YP_307760.1 559701 D 255470 CDS YP_307761.1 73748522 3623720 559961..561133 1 NC_007356.1 pyruvic-ferredoxin oxidoreductase subunit alpha 561133 porA 3623720 porA Dehalococcoides mccartyi CBDB1 pyruvic-ferredoxin oxidoreductase subunit alpha YP_307761.1 559961 D 255470 CDS YP_307762.1 73748523 3623721 561133..562074 1 NC_007356.1 pyruvic-ferredoxin oxidoreductase subunit beta 562074 porB 3623721 porB Dehalococcoides mccartyi CBDB1 pyruvic-ferredoxin oxidoreductase subunit beta YP_307762.1 561133 D 255470 CDS YP_307763.1 73748524 3622760 562050..562523 1 NC_007356.1 [Fe] hydrogenase subunit HymA 562523 hymA 3622760 hymA Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase subunit HymA YP_307763.1 562050 D 255470 CDS YP_307764.1 73748525 3623072 562523..564394 1 NC_007356.1 [Fe] hydrogenase subunit HymB 564394 hymB 3623072 hymB Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase subunit HymB YP_307764.1 562523 D 255470 CDS YP_307765.1 73748526 3623074 564407..565129 1 NC_007356.1 [Fe] hydrogenase subunit HymC 565129 hymC 3623074 hymC Dehalococcoides mccartyi CBDB1 [Fe] hydrogenase subunit HymC YP_307765.1 564407 D 255470 CDS YP_307766.1 73748527 3622958 565317..566042 1 NC_007356.1 hypothetical protein 566042 3622958 cbdb_B17 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307766.1 565317 D 255470 CDS YP_307767.1 73748528 3622813 566204..567673 1 NC_007356.1 mercuric reductase 567673 3622813 cbdb_A687 Dehalococcoides mccartyi CBDB1 mercuric reductase YP_307767.1 566204 D 255470 CDS YP_307768.1 73748529 3622814 567933..568319 1 NC_007356.1 hypothetical protein 568319 3622814 cbdb_A688 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307768.1 567933 D 255470 CDS YP_307769.1 73748530 3622815 complement(568499..569293) 1 NC_007356.1 oxidoreductase, short chaindehydrogenase 569293 3622815 cbdb_A689 Dehalococcoides mccartyi CBDB1 oxidoreductase, short chaindehydrogenase YP_307769.1 568499 R 255470 CDS YP_307770.1 73748531 3622817 569504..570652 1 NC_007356.1 GTP-binding protein 570652 3622817 cbdb_A691 Dehalococcoides mccartyi CBDB1 GTP-binding protein YP_307770.1 569504 D 255470 CDS YP_307771.1 73748532 3622818 570656..570868 1 NC_007356.1 hypothetical protein 570868 3622818 cbdb_A692 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307771.1 570656 D 255470 CDS YP_307772.1 73748533 3622819 complement(571250..571411) 1 NC_007356.1 hypothetical protein 571411 3622819 cbdb_A693 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307772.1 571250 R 255470 CDS YP_307773.1 73748534 3622820 complement(571443..571868) 1 NC_007356.1 hypothetical protein 571868 3622820 cbdb_A694 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307773.1 571443 R 255470 CDS YP_307774.1 73748535 3622821 complement(571869..572207) 1 NC_007356.1 hypothetical protein 572207 3622821 cbdb_A695 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307774.1 571869 R 255470 CDS YP_307775.1 73748536 3622822 complement(572204..572413) 1 NC_007356.1 hypothetical protein 572413 3622822 cbdb_A696 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307775.1 572204 R 255470 CDS YP_307776.1 73748537 3622823 complement(572493..573185) 1 NC_007356.1 hypothetical protein 573185 3622823 cbdb_A697 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307776.1 572493 R 255470 CDS YP_307777.1 73748538 3622824 complement(573178..573381) 1 NC_007356.1 hypothetical protein 573381 3622824 cbdb_A698 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307777.1 573178 R 255470 CDS YP_307778.1 73748539 3622825 complement(573381..574511) 1 NC_007356.1 hypothetical protein 574511 3622825 cbdb_A699 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307778.1 573381 R 255470 CDS YP_307779.1 73748540 3622826 complement(574514..574921) 1 NC_007356.1 hypothetical protein 574921 3622826 cbdb_A700 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307779.1 574514 R 255470 CDS YP_307780.1 73748541 3622827 complement(574980..575546) 1 NC_007356.1 hypothetical protein 575546 3622827 cbdb_A701 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307780.1 574980 R 255470 CDS YP_307781.1 73748542 3622828 complement(575548..575826) 1 NC_007356.1 hypothetical protein 575826 3622828 cbdb_A703 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307781.1 575548 R 255470 CDS YP_307782.1 73748543 3622829 complement(575987..576526) 1 NC_007356.1 hypothetical protein 576526 3622829 cbdb_A704 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307782.1 575987 R 255470 CDS YP_307783.1 73748544 3622830 complement(576552..576995) 1 NC_007356.1 hypothetical protein 576995 3622830 cbdb_A705 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307783.1 576552 R 255470 CDS YP_307784.1 73748545 3622831 complement(576992..577267) 1 NC_007356.1 hypothetical protein 577267 3622831 cbdb_A706 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307784.1 576992 R 255470 CDS YP_307785.1 73748546 3622832 complement(577272..577403) 1 NC_007356.1 hypothetical protein 577403 3622832 cbdb_A707 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307785.1 577272 R 255470 CDS YP_307786.1 73748547 3623535 577555..577671 1 NC_007356.1 hypothetical protein 577671 3623535 cbdb_A708 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307786.1 577555 D 255470 CDS YP_307787.1 73748548 3623536 complement(577697..578212) 1 NC_007356.1 hypothetical protein 578212 3623536 cbdb_A709 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307787.1 577697 R 255470 CDS YP_307788.1 73748549 3623537 complement(578315..578521) 1 NC_007356.1 hypothetical protein 578521 3623537 cbdb_A711 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307788.1 578315 R 255470 CDS YP_307789.1 73748550 3623538 complement(578499..579170) 1 NC_007356.1 hypothetical protein 579170 3623538 cbdb_A712 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307789.1 578499 R 255470 CDS YP_307790.1 73748551 3623547 complement(579163..579282) 1 NC_007356.1 hypothetical protein 579282 3623547 cbdb_A713 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307790.1 579163 R 255470 CDS YP_307791.1 73748552 3622750 complement(579674..580840) 1 NC_007356.1 catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis; LL-diaminopimelate aminotransferase 580840 3622750 cbdb_A714 Dehalococcoides mccartyi CBDB1 LL-diaminopimelate aminotransferase YP_307791.1 579674 R 255470 CDS YP_307792.1 73748553 3623172 complement(580827..581681) 1 NC_007356.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 581681 dapF 3623172 dapF Dehalococcoides mccartyi CBDB1 diaminopimelate epimerase YP_307792.1 580827 R 255470 CDS YP_307793.1 73748554 3623753 complement(581668..582654) 1 NC_007356.1 tRNA delta(2)-isopentenylpyrophosphatetransferase 582654 miaA 3623753 miaA Dehalococcoides mccartyi CBDB1 tRNA delta(2)-isopentenylpyrophosphatetransferase YP_307793.1 581668 R 255470 CDS YP_307794.1 73748555 3624028 complement(582715..583476) 1 NC_007356.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 583476 tpiA 3624028 tpiA Dehalococcoides mccartyi CBDB1 triosephosphate isomerase YP_307794.1 582715 R 255470 CDS YP_307795.1 73748556 3623224 complement(583488..584693) 1 NC_007356.1 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 584693 3623224 cbdb_A718 Dehalococcoides mccartyi CBDB1 cofactor-independent phosphoglycerate mutase YP_307795.1 583488 R 255470 CDS YP_307796.1 73748557 3623964 complement(584686..585879) 1 NC_007356.1 phosphoglycerate kinase 585879 pgk 3623964 pgk Dehalococcoides mccartyi CBDB1 phosphoglycerate kinase YP_307796.1 584686 R 255470 CDS YP_307797.1 73748558 3623188 complement(585979..587922) 1 NC_007356.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 587922 dxs 3623188 dxs Dehalococcoides mccartyi CBDB1 1-deoxy-D-xylulose-5-phosphate synthase YP_307797.1 585979 R 255470 CDS YP_307798.1 73748559 3623225 588068..588595 1 NC_007356.1 small multi-drug export protein 588595 3623225 cbdb_A721 Dehalococcoides mccartyi CBDB1 small multi-drug export protein YP_307798.1 588068 D 255470 CDS YP_307799.1 73748560 3622959 588811..588999 1 NC_007356.1 hypothetical protein 588999 3622959 cbdb_B18 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307799.1 588811 D 255470 CDS YP_307800.1 73748561 3622751 complement(589105..590553) 1 NC_007356.1 hypoxanthine phosphoribosyl transferase 590553 hpt 3622751 hpt Dehalococcoides mccartyi CBDB1 hypoxanthine phosphoribosyl transferase YP_307800.1 589105 R 255470 CDS YP_307801.1 73748562 3623365 complement(590618..590977) 1 NC_007356.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 590977 rplT 3623365 rplT Dehalococcoides mccartyi CBDB1 50S ribosomal protein L20 YP_307801.1 590618 R 255470 CDS YP_307802.1 73748563 3623790 complement(590996..591199) 1 NC_007356.1 50S ribosomal protein L35 591199 rpmI 3623790 rpmI Dehalococcoides mccartyi CBDB1 50S ribosomal protein L35 YP_307802.1 590996 R 255470 CDS YP_307803.1 73748564 3623987 complement(591192..591665) 1 NC_007356.1 translation initiation factor IF-3 591665 infC 3623987 infC Dehalococcoides mccartyi CBDB1 translation initiation factor IF-3 YP_307803.1 591192 R 255470 CDS YP_307804.1 73748565 3623355 complement(591816..593564) 1 NC_007356.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 593564 thrS 3623355 thrS Dehalococcoides mccartyi CBDB1 threonyl-tRNA synthetase YP_307804.1 591816 R 255470 CDS YP_307805.1 73748566 3623226 complement(593691..596222) 1 NC_007356.1 hypothetical protein 596222 3623226 cbdb_A727 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307805.1 593691 R 255470 CDS YP_307806.1 73748567 3623227 complement(596364..597770) 1 NC_007356.1 hypothetical protein 597770 3623227 cbdb_A728 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307806.1 596364 R 255470 CDS YP_307807.1 73748568 3623228 598456..598824 1 NC_007356.1 hypothetical protein 598824 3623228 cbdb_A729 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307807.1 598456 D 255470 CDS YP_307808.1 73748569 3623229 598835..599497 1 NC_007356.1 hypothetical protein 599497 3623229 cbdb_A730 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307808.1 598835 D 255470 CDS YP_307809.1 73748570 3623230 complement(599494..600153) 1 NC_007356.1 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 600153 3623230 cbdb_A732 Dehalococcoides mccartyi CBDB1 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_307809.1 599494 R 255470 CDS YP_307810.1 73748571 3623174 complement(600177..600680) 1 NC_007356.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 600680 def 3623174 def Dehalococcoides mccartyi CBDB1 peptide deformylase YP_307810.1 600177 R 255470 CDS YP_307811.1 73748572 3623231 complement(600966..601769) 1 NC_007356.1 hypothetical protein 601769 3623231 cbdb_A734 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307811.1 600966 R 255470 CDS YP_307812.1 73748573 3623232 complement(601827..602228) 1 NC_007356.1 hypothetical protein 602228 3623232 cbdb_A735 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307812.1 601827 R 255470 CDS YP_307813.1 73748574 3623233 complement(602238..602897) 1 NC_007356.1 hypothetical protein 602897 3623233 cbdb_A736 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307813.1 602238 R 255470 CDS YP_307814.1 73748575 3623234 603110..603274 1 NC_007356.1 hypothetical protein 603274 3623234 cbdb_A737 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307814.1 603110 D 255470 CDS YP_307815.1 73748576 3623235 complement(603346..605472) 1 NC_007356.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 605472 hppA 3623235 hppA Dehalococcoides mccartyi CBDB1 membrane-bound proton-translocating pyrophosphatase YP_307815.1 603346 R 255470 CDS YP_307816.1 73748577 3623236 605662..605892 1 NC_007356.1 ATPase subunit C family protein 605892 3623236 cbdb_A739 Dehalococcoides mccartyi CBDB1 ATPase subunit C family protein YP_307816.1 605662 D 255470 CDS YP_307817.1 73748578 3623237 complement(605960..606289) 1 NC_007356.1 hypothetical protein 606289 3623237 cbdb_A740 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307817.1 605960 R 255470 CDS YP_307818.1 73748579 3623238 complement(606361..607500) 1 NC_007356.1 M50 family metallopeptidase 607500 3623238 cbdb_A741 Dehalococcoides mccartyi CBDB1 M50 family metallopeptidase YP_307818.1 606361 R 255470 CDS YP_307819.1 73748580 3623611 complement(607527..608039) 1 NC_007356.1 transcription elongation factor GreA 608039 greA 3623611 greA Dehalococcoides mccartyi CBDB1 transcription elongation factor GreA YP_307819.1 607527 R 255470 CDS YP_307820.1 73748581 3623239 complement(608358..609497) 1 NC_007356.1 hypothetical protein 609497 3623239 cbdb_A744 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307820.1 608358 R 255470 CDS YP_307821.1 73748582 3623240 609638..609874 1 NC_007356.1 hypothetical protein 609874 3623240 cbdb_A745 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307821.1 609638 D 255470 CDS YP_307822.1 73748583 3623241 complement(609863..610603) 1 NC_007356.1 hypothetical protein 610603 3623241 cbdb_A747 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307822.1 609863 R 255470 CDS YP_307823.1 73748584 3623242 complement(610596..611708) 1 NC_007356.1 M50 family metallopeptidase 611708 3623242 cbdb_A748 Dehalococcoides mccartyi CBDB1 M50 family metallopeptidase YP_307823.1 610596 R 255470 CDS YP_307824.1 73748585 3622865 complement(611744..613039) 1 NC_007356.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 613039 thiC 3622865 thiC Dehalococcoides mccartyi CBDB1 thiamine biosynthesis protein ThiC YP_307824.1 611744 R 255470 CDS YP_307825.1 73748586 3623599 613267..613974 1 NC_007356.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 613974 gidB 3623599 gidB Dehalococcoides mccartyi CBDB1 16S rRNA methyltransferase GidB YP_307825.1 613267 D 255470 CDS YP_307826.1 73748587 3623243 614193..615722 1 NC_007356.1 single-stranded nucleic acid binding R3H domain-containing protein 615722 3623243 cbdb_A751 Dehalococcoides mccartyi CBDB1 single-stranded nucleic acid binding R3H domain-containing protein YP_307826.1 614193 D 255470 CDS YP_307827.1 73748588 3624026 615725..616351 1 NC_007356.1 thymidylate kinase 616351 tmk 3624026 tmk Dehalococcoides mccartyi CBDB1 thymidylate kinase YP_307827.1 615725 D 255470 CDS YP_307828.1 73748589 3624031 616344..617417 1 NC_007356.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 617417 mnmA 3624031 mnmA Dehalococcoides mccartyi CBDB1 tRNA-specific 2-thiouridylase MnmA YP_307828.1 616344 D 255470 CDS YP_307829.1 73748590 3623383 617419..618057 1 NC_007356.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 618057 rnhB 3623383 rnhB Dehalococcoides mccartyi CBDB1 ribonuclease HII YP_307829.1 617419 D 255470 CDS YP_307830.1 73748591 3623244 618047..618412 1 NC_007356.1 hypothetical protein 618412 3623244 cbdb_A757 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307830.1 618047 D 255470 CDS YP_307831.1 73748592 3623335 618448..619506 1 NC_007356.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 619506 thiE 3623335 thiE Dehalococcoides mccartyi CBDB1 thiamine-phosphate pyrophosphorylase YP_307831.1 618448 D 255470 CDS YP_307832.1 73748593 3623245 619520..620152 1 NC_007356.1 haloacid dehalogenase 620152 3623245 cbdb_A759 Dehalococcoides mccartyi CBDB1 haloacid dehalogenase YP_307832.1 619520 D 255470 CDS YP_307833.1 73748594 3623588 620157..622196 1 NC_007356.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 622196 hppA 3623588 hppA Dehalococcoides mccartyi CBDB1 membrane-bound proton-translocating pyrophosphatase YP_307833.1 620157 D 255470 CDS YP_307834.1 73748595 3623246 complement(622208..622825) 1 NC_007356.1 metallo-beta-lactamase 622825 3623246 cbdb_A762 Dehalococcoides mccartyi CBDB1 metallo-beta-lactamase YP_307834.1 622208 R 255470 CDS YP_307835.1 73748596 3623247 622896..623477 1 NC_007356.1 hypothetical protein 623477 3623247 cbdb_A763 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307835.1 622896 D 255470 CDS YP_307836.1 73748597 3623608 623514..624815 1 NC_007356.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 624815 glyS 3623608 glyS Dehalococcoides mccartyi CBDB1 glycyl-tRNA synthetase YP_307836.1 623514 D 255470 CDS YP_307837.1 73748598 3623780 624829..626076 1 NC_007356.1 nuclease SbcD 626076 sbcD 3623780 sbcD Dehalococcoides mccartyi CBDB1 nuclease SbcD YP_307837.1 624829 D 255470 CDS YP_307838.1 73748599 3623248 626100..626849 1 NC_007356.1 RsuA family pseudouridine synthase 626849 3623248 cbdb_A767 Dehalococcoides mccartyi CBDB1 RsuA family pseudouridine synthase YP_307838.1 626100 D 255470 CDS YP_307839.1 73748600 3623249 complement(626842..627576) 1 NC_007356.1 phosphoribosyltransferase 627576 3623249 cbdb_A768 Dehalococcoides mccartyi CBDB1 phosphoribosyltransferase YP_307839.1 626842 R 255470 CDS YP_307840.1 73748601 3623262 complement(627576..629291) 1 NC_007356.1 adenine deaminase 629291 adeC 3623262 adeC Dehalococcoides mccartyi CBDB1 adenine deaminase YP_307840.1 627576 R 255470 CDS YP_307841.1 73748602 3622752 complement(629275..629820) 1 NC_007356.1 hypoxanthine phosphoribosyltransferase 629820 hpt 3622752 hpt Dehalococcoides mccartyi CBDB1 hypoxanthine phosphoribosyltransferase YP_307841.1 629275 R 255470 CDS YP_307842.1 73748603 3623250 630043..630774 1 NC_007356.1 ABC transporter associated protein with signal peptide periplasmic substrate binding subunit 630774 3623250 cbdb_A772 Dehalococcoides mccartyi CBDB1 ABC transporter associated protein with signal peptide periplasmic substrate binding subunit YP_307842.1 630043 D 255470 CDS YP_307843.1 73748604 3623251 630869..631786 1 NC_007356.1 ABC transporter ATP-binding protein 631786 3623251 cbdb_A773 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307843.1 630869 D 255470 CDS YP_307844.1 73748605 3623252 631783..632865 1 NC_007356.1 ABC transporter permease 632865 3623252 cbdb_A774 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307844.1 631783 D 255470 CDS YP_307845.1 73748606 3623210 complement(632948..633979) 1 NC_007356.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 633979 queA 3623210 queA Dehalococcoides mccartyi CBDB1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_307845.1 632948 R 255470 CDS YP_307846.1 73748607 3622858 634142..634939 1 NC_007356.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 634939 surE 3622858 surE Dehalococcoides mccartyi CBDB1 stationary phase survival protein SurE YP_307846.1 634142 D 255470 CDS YP_307847.1 73748608 3622960 complement(635051..635221) 1 NC_007356.1 hypothetical protein 635221 3622960 cbdb_B19 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307847.1 635051 R 255470 CDS YP_307848.1 73748609 3623253 635295..635627 1 NC_007356.1 hypothetical protein 635627 3623253 cbdb_A778 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307848.1 635295 D 255470 CDS YP_307849.1 73748610 3623254 635796..636653 1 NC_007356.1 hypothetical protein 636653 3623254 cbdb_A779 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307849.1 635796 D 255470 CDS YP_307850.1 73748611 3623297 636676..637050 1 NC_007356.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 637050 panD 3623297 panD Dehalococcoides mccartyi CBDB1 aspartate alpha-decarboxylase YP_307850.1 636676 D 255470 CDS YP_307851.1 73748612 3623699 637053..637892 1 NC_007356.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 637892 panB 3623699 panB Dehalococcoides mccartyi CBDB1 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_307851.1 637053 D 255470 CDS YP_307852.1 73748613 3623296 637907..638713 1 NC_007356.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 638713 panC 3623296 panC Dehalococcoides mccartyi CBDB1 pantoate--beta-alanine ligase YP_307852.1 637907 D 255470 CDS YP_307853.1 73748614 3623255 complement(638710..639972) 1 NC_007356.1 major facilitator family transporter 639972 3623255 cbdb_A783 Dehalococcoides mccartyi CBDB1 major facilitator family transporter YP_307853.1 638710 R 255470 CDS YP_307854.1 73748615 3623256 complement(639972..640271) 1 NC_007356.1 hypothetical protein 640271 3623256 cbdb_A784 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307854.1 639972 R 255470 CDS YP_307855.1 73748616 3623132 640934..642436 1 NC_007356.1 phytoene dehydrogenase 642436 3623132 cbdb_A785 Dehalococcoides mccartyi CBDB1 phytoene dehydrogenase YP_307855.1 640934 D 255470 CDS YP_307856.1 73748617 3624136 complement(642433..643023) 1 NC_007356.1 PAP2 family protein 643023 3624136 cbdb_A787 Dehalococcoides mccartyi CBDB1 PAP2 family protein YP_307856.1 642433 R 255470 CDS YP_307857.1 73748618 3624137 643241..643987 1 NC_007356.1 ABC transporter ATP-binding protein 643987 3624137 cbdb_A789 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307857.1 643241 D 255470 CDS YP_307858.1 73748619 3624138 643980..644705 1 NC_007356.1 ABC transporter permease 644705 3624138 cbdb_A791 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307858.1 643980 D 255470 CDS YP_307859.1 73748620 3622857 644805..645560 1 NC_007356.1 iron-regulated ABC transporter ATP-binding protein, SufC 645560 sufC 3622857 sufC Dehalococcoides mccartyi CBDB1 iron-regulated ABC transporter ATP-binding protein, SufC YP_307859.1 644805 D 255470 CDS YP_307860.1 73748621 3622856 645542..646777 1 NC_007356.1 iron-regulated ABC transporter subunit SufB-related 646777 sufB 3622856 sufB Dehalococcoides mccartyi CBDB1 iron-regulated ABC transporter subunit SufB-related YP_307860.1 645542 D 255470 CDS YP_307861.1 73748622 3624139 complement(646846..647637) 1 NC_007356.1 ABC transporter ATP-binding protein 647637 3624139 cbdb_A795 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307861.1 646846 R 255470 CDS YP_307862.1 73748623 3623356 complement(647913..648566) 1 NC_007356.1 thymidylate synthase 648566 thyA 3623356 thyA Dehalococcoides mccartyi CBDB1 thymidylate synthase YP_307862.1 647913 R 255470 CDS YP_307863.1 73748624 3624140 complement(648578..649285) 1 NC_007356.1 hypothetical protein 649285 3624140 cbdb_A797 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307863.1 648578 R 255470 CDS YP_307864.1 73748625 3624141 complement(649294..649884) 1 NC_007356.1 hypothetical protein 649884 3624141 cbdb_A799 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307864.1 649294 R 255470 CDS YP_307865.1 73748626 3624142 649987..650403 1 NC_007356.1 hypothetical protein 650403 3624142 cbdb_A800 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307865.1 649987 D 255470 CDS YP_307866.1 73748627 3624143 650413..651873 1 NC_007356.1 hypothetical protein 651873 3624143 cbdb_A801 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307866.1 650413 D 255470 CDS YP_307867.1 73748628 3624144 651874..652488 1 NC_007356.1 nitroreductase 652488 3624144 cbdb_A802 Dehalococcoides mccartyi CBDB1 nitroreductase YP_307867.1 651874 D 255470 CDS YP_307868.1 73748629 3624145 complement(652493..654094) 1 NC_007356.1 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate/homocitrate synthase transferase 654094 3624145 cbdb_A803 Dehalococcoides mccartyi CBDB1 alpha-isopropylmalate/homocitrate synthase transferase YP_307868.1 652493 R 255470 CDS YP_307869.1 73748630 3624001 complement(654101..655198) 1 NC_007356.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 655198 leuB 3624001 leuB Dehalococcoides mccartyi CBDB1 3-isopropylmalate dehydrogenase YP_307869.1 654101 R 255470 CDS YP_307870.1 73748631 3624003 complement(655199..655699) 1 NC_007356.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 655699 leuD 3624003 leuD Dehalococcoides mccartyi CBDB1 3-isopropylmalate dehydratase small subunit YP_307870.1 655199 R 255470 CDS YP_307871.1 73748632 3624002 complement(655771..657021) 1 NC_007356.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 657021 leuC 3624002 leuC Dehalococcoides mccartyi CBDB1 3-isopropylmalate dehydratase large subunit YP_307871.1 655771 R 255470 CDS YP_307872.1 73748633 3624146 complement(657042..657443) 1 NC_007356.1 membrane protein, MgtC 657443 3624146 cbdb_A807 Dehalococcoides mccartyi CBDB1 membrane protein, MgtC YP_307872.1 657042 R 255470 CDS YP_307873.1 73748634 3624000 complement(657459..658976) 1 NC_007356.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 658976 leuA 3624000 leuA Dehalococcoides mccartyi CBDB1 2-isopropylmalate synthase YP_307873.1 657459 R 255470 CDS YP_307874.1 73748635 3623545 complement(659152..660150) 1 NC_007356.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 660150 ilvC 3623545 ilvC Dehalococcoides mccartyi CBDB1 ketol-acid reductoisomerase YP_307874.1 659152 R 255470 CDS YP_307875.1 73748636 3623984 complement(660169..660705) 1 NC_007356.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 660705 ilvH 3623984 ilvH Dehalococcoides mccartyi CBDB1 acetolactate synthase 3 regulatory subunit YP_307875.1 660169 R 255470 CDS YP_307876.1 73748637 3623544 complement(660681..662390) 1 NC_007356.1 acetolactate synthase, large subunit 662390 ilvB 3623544 ilvB Dehalococcoides mccartyi CBDB1 acetolactate synthase, large subunit YP_307876.1 660681 R 255470 CDS YP_307877.1 73748638 3623546 complement(662412..664079) 1 NC_007356.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 664079 ilvD 3623546 ilvD Dehalococcoides mccartyi CBDB1 dihydroxy-acid dehydratase YP_307877.1 662412 R 255470 CDS YP_307878.1 73748639 3624147 complement(664180..664821) 1 NC_007356.1 translation factor Sua5 664821 3624147 cbdb_A816 Dehalococcoides mccartyi CBDB1 translation factor Sua5 YP_307878.1 664180 R 255470 CDS YP_307879.1 73748640 3622765 665053..666654 1 NC_007356.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 666654 guaA 3622765 guaA Dehalococcoides mccartyi CBDB1 GMP synthase YP_307879.1 665053 D 255470 CDS YP_307880.1 73748641 3624148 666661..666972 1 NC_007356.1 hypothetical protein 666972 3624148 cbdb_A818 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307880.1 666661 D 255470 CDS YP_307881.1 73748642 3623664 666992..668269 1 NC_007356.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 668269 purD 3623664 purD Dehalococcoides mccartyi CBDB1 phosphoribosylamine--glycine ligase YP_307881.1 666992 D 255470 CDS YP_307882.1 73748643 3623665 668260..668724 1 NC_007356.1 phosphoribosylaminoimidazole carboxylase,catalytic subunit 668724 purE 3623665 purE Dehalococcoides mccartyi CBDB1 phosphoribosylaminoimidazole carboxylase,catalytic subunit YP_307882.1 668260 D 255470 CDS YP_307883.1 73748644 3623662 668721..670076 1 NC_007356.1 adenylosuccinate lyase 670076 purB 3623662 purB Dehalococcoides mccartyi CBDB1 adenylosuccinate lyase YP_307883.1 668721 D 255470 CDS YP_307884.1 73748645 3623663 670077..670991 1 NC_007356.1 phosphoribosylaminoimidazole-succinocarboxamide synthase 670991 purC 3623663 purC Dehalococcoides mccartyi CBDB1 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_307884.1 670077 D 255470 CDS YP_307885.1 73748646 3623075 complement(671064..671654) 1 NC_007356.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 671654 hisB 3623075 hisB Dehalococcoides mccartyi CBDB1 imidazoleglycerol-phosphate dehydratase YP_307885.1 671064 R 255470 CDS YP_307886.1 73748647 3623520 complement(671656..672732) 1 NC_007356.1 histidinol-phosphate aminotransferase 672732 hisC 3623520 hisC Dehalococcoides mccartyi CBDB1 histidinol-phosphate aminotransferase YP_307886.1 671656 R 255470 CDS YP_307887.1 73748648 3623070 complement(672745..674055) 1 NC_007356.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 674055 hisD 3623070 hisD Dehalococcoides mccartyi CBDB1 histidinol dehydrogenase YP_307887.1 672745 R 255470 CDS YP_307888.1 73748649 3624149 complement(674062..675468) 1 NC_007356.1 ATP phosphoribosyltransferase 675468 3624149 cbdb_A828 Dehalococcoides mccartyi CBDB1 ATP phosphoribosyltransferase YP_307888.1 674062 R 255470 CDS YP_307889.1 73748650 3623901 complement(675461..676699) 1 NC_007356.1 histidyl-tRNA synthetase 676699 hisS 3623901 hisS Dehalococcoides mccartyi CBDB1 histidyl-tRNA synthetase YP_307889.1 675461 R 255470 CDS YP_307890.1 73748651 3624150 676840..677130 1 NC_007356.1 hypothetical protein 677130 3624150 cbdb_A830 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307890.1 676840 D 255470 CDS YP_307891.1 73748652 3624151 677131..677934 1 NC_007356.1 SPFH domain-containing protein 677934 3624151 cbdb_A831 Dehalococcoides mccartyi CBDB1 SPFH domain-containing protein YP_307891.1 677131 D 255470 CDS YP_307892.1 73748653 3622768 complement(678004..678804) 1 NC_007356.1 biotin--acetyl-CoA-carboxylase ligase 678804 birA 3622768 birA Dehalococcoides mccartyi CBDB1 biotin--acetyl-CoA-carboxylase ligase YP_307892.1 678004 R 255470 CDS YP_307893.1 73748654 3624152 678883..679437 1 NC_007356.1 hypothetical protein 679437 3624152 cbdb_A833 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307893.1 678883 D 255470 CDS YP_307894.1 73748655 3623906 679476..680372 1 NC_007356.1 ABC transporter ATP-binding protein 680372 3623906 cbdb_A834 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307894.1 679476 D 255470 CDS YP_307895.1 73748656 3623647 680332..681582 1 NC_007356.1 ABC transporter permease 681582 3623647 cbdb_A835 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307895.1 680332 D 255470 CDS YP_307896.1 73748657 3623648 682091..682306 1 NC_007356.1 hypothetical protein 682306 3623648 cbdb_A837 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307896.1 682091 D 255470 CDS YP_307897.1 73748658 3623649 682623..683846 1 NC_007356.1 ABC transporter permease 683846 3623649 cbdb_A838 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_307897.1 682623 D 255470 CDS YP_307898.1 73748659 3623650 683848..684558 1 NC_007356.1 ABC transporter ATP-binding protein 684558 3623650 cbdb_A839 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_307898.1 683848 D 255470 CDS YP_307899.1 73748660 3623651 684571..685707 1 NC_007356.1 oxygen-independent coproporphyrinogen III oxidase 685707 3623651 cbdb_A840 Dehalococcoides mccartyi CBDB1 oxygen-independent coproporphyrinogen III oxidase YP_307899.1 684571 D 255470 CDS YP_307900.1 73748661 3623998 685771..687588 1 NC_007356.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 687588 lepA 3623998 lepA Dehalococcoides mccartyi CBDB1 GTP-binding protein LepA YP_307900.1 685771 D 255470 CDS YP_307901.1 73748662 3623276 687728..689674 1 NC_007356.1 hydrogenase subunit EchA 689674 echA 3623276 echA Dehalococcoides mccartyi CBDB1 hydrogenase subunit EchA YP_307901.1 687728 D 255470 CDS YP_307902.1 73748663 3623277 689671..690519 1 NC_007356.1 hydrogenase subunit EchB 690519 echB 3623277 echB Dehalococcoides mccartyi CBDB1 hydrogenase subunit EchB YP_307902.1 689671 D 255470 CDS YP_307903.1 73748664 3623278 690520..690987 1 NC_007356.1 hydrogenase 4 subunit EchC 690987 echC 3623278 echC Dehalococcoides mccartyi CBDB1 hydrogenase 4 subunit EchC YP_307903.1 690520 D 255470 CDS YP_307904.1 73748665 3623302 690980..691465 1 NC_007356.1 hydrogenase subunit HymA 691465 3623302 cbdb_A845 Dehalococcoides mccartyi CBDB1 hydrogenase subunit HymA YP_307904.1 690980 D 255470 CDS YP_307905.1 73748666 3623303 691479..693401 1 NC_007356.1 hydrogenase subunit HymB 693401 3623303 cbdb_A846 Dehalococcoides mccartyi CBDB1 hydrogenase subunit HymB YP_307905.1 691479 D 255470 CDS YP_307906.1 73748667 3623304 693401..693994 1 NC_007356.1 hydrogenase subunit HymC 693994 3623304 cbdb_A848 Dehalococcoides mccartyi CBDB1 hydrogenase subunit HymC YP_307906.1 693401 D 255470 CDS YP_307907.1 73748668 3623305 693997..695382 1 NC_007356.1 hydrogenase subunit 695382 3623305 cbdb_A849 Dehalococcoides mccartyi CBDB1 hydrogenase subunit YP_307907.1 693997 D 255470 CDS YP_307908.1 73748669 3623306 695383..696462 1 NC_007356.1 hydrogenase 4 subunit EchE 696462 3623306 cbdb_A850 Dehalococcoides mccartyi CBDB1 hydrogenase 4 subunit EchE YP_307908.1 695383 D 255470 CDS YP_307909.1 73748670 3623307 696472..696816 1 NC_007356.1 hydrogenase subunit EchF 696816 3623307 cbdb_A851 Dehalococcoides mccartyi CBDB1 hydrogenase subunit EchF YP_307909.1 696472 D 255470 CDS YP_307910.1 73748671 3623308 complement(696898..697827) 1 NC_007356.1 lysyl-tRNA synthetase 697827 3623308 cbdb_A853 Dehalococcoides mccartyi CBDB1 lysyl-tRNA synthetase YP_307910.1 696898 R 255470 CDS YP_307911.1 73748672 3623280 complement(697833..698399) 1 NC_007356.1 translation elongation factor P 698399 efp 3623280 efp Dehalococcoides mccartyi CBDB1 translation elongation factor P YP_307911.1 697833 R 255470 CDS YP_307912.1 73748673 3623402 698589..699074 1 NC_007356.1 MarR family transcriptional regulator 699074 rdhR 3623402 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_307912.1 698589 D 255470 CDS YP_307913.1 73748674 3622887 699079..702003 1 NC_007356.1 MmpL domain-containing protein 702003 3622887 cbdb_A856 Dehalococcoides mccartyi CBDB1 MmpL domain-containing protein YP_307913.1 699079 D 255470 CDS YP_307914.1 73748675 3622888 complement(702049..702693) 1 NC_007356.1 DNA-binding protein 702693 3622888 cbdb_A857 Dehalococcoides mccartyi CBDB1 DNA-binding protein YP_307914.1 702049 R 255470 CDS YP_307915.1 73748676 3622889 complement(703199..703534) 1 NC_007356.1 hypothetical protein 703534 3622889 cbdb_A858 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307915.1 703199 R 255470 CDS YP_307916.1 73748677 3622649 703898..705172 1 NC_007356.1 arsenical pump membrane protein 705172 arsB 3622649 arsB Dehalococcoides mccartyi CBDB1 arsenical pump membrane protein YP_307916.1 703898 D 255470 CDS YP_307917.1 73748678 3622891 705174..706559 1 NC_007356.1 hypothetical protein 706559 3622891 cbdb_A860 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307917.1 705174 D 255470 CDS YP_307918.1 73748679 3622892 706709..707818 1 NC_007356.1 aminopeptidase 707818 3622892 cbdb_A861 Dehalococcoides mccartyi CBDB1 aminopeptidase YP_307918.1 706709 D 255470 CDS YP_307919.1 73748680 3622893 707855..708526 1 NC_007356.1 phosphoribosyltransferase 708526 3622893 cbdb_A862 Dehalococcoides mccartyi CBDB1 phosphoribosyltransferase YP_307919.1 707855 D 255470 CDS YP_307920.1 73748681 3622894 708734..709189 1 NC_007356.1 hypothetical protein 709189 3622894 cbdb_A863 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307920.1 708734 D 255470 CDS YP_307921.1 73748682 3622895 709251..709946 1 NC_007356.1 hypothetical protein 709946 3622895 cbdb_A864 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307921.1 709251 D 255470 CDS YP_307922.1 73748683 3622896 complement(709965..710771) 1 NC_007356.1 hypothetical protein 710771 3622896 cbdb_A865 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307922.1 709965 R 255470 CDS YP_307923.1 73748684 3622897 complement(710755..711663) 1 NC_007356.1 hypothetical protein 711663 3622897 cbdb_A867 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307923.1 710755 R 255470 CDS YP_307924.1 73748685 3622898 complement(711880..712080) 1 NC_007356.1 hypothetical protein 712080 3622898 cbdb_A868 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307924.1 711880 R 255470 CDS YP_307925.1 73748686 3622899 complement(712107..712361) 1 NC_007356.1 hypothetical protein 712361 3622899 cbdb_A869 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307925.1 712107 R 255470 CDS YP_307926.1 73748687 3622900 complement(712519..713271) 1 NC_007356.1 hypothetical protein 713271 3622900 cbdb_A870 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307926.1 712519 R 255470 CDS YP_307927.1 73748688 3622901 complement(713281..713691) 1 NC_007356.1 (Fe-S)-binding protein 713691 3622901 cbdb_A871 Dehalococcoides mccartyi CBDB1 (Fe-S)-binding protein YP_307927.1 713281 R 255470 CDS YP_307928.1 73748689 3622902 complement(713700..714926) 1 NC_007356.1 hypothetical protein 714926 3622902 cbdb_A872 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307928.1 713700 R 255470 CDS YP_307929.1 73748690 3623973 715147..716229 1 NC_007356.1 twitching mobility protein 716229 pilT 3623973 pilT Dehalococcoides mccartyi CBDB1 twitching mobility protein YP_307929.1 715147 D 255470 CDS YP_307930.1 73748691 3622903 716512..716883 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit A 716883 3622903 cbdb_A874 Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit A YP_307930.1 716512 D 255470 CDS YP_307931.1 73748692 3623687 716874..717476 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit B 717476 nuoB 3623687 nuoB Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit B YP_307931.1 716874 D 255470 CDS YP_307932.1 73748693 3623688 717481..717930 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit C 717930 nuoC 3623688 nuoC Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit C YP_307932.1 717481 D 255470 CDS YP_307933.1 73748694 3623689 717920..719023 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit D 719023 nuoD 3623689 nuoD Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit D YP_307933.1 717920 D 255470 CDS YP_307934.1 73748695 3623690 719023..720084 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit H 720084 nuoH 3623690 nuoH Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit H YP_307934.1 719023 D 255470 CDS YP_307935.1 73748696 3622904 720110..720619 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit I 720619 3622904 cbdb_A880 Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit I YP_307935.1 720110 D 255470 CDS YP_307936.1 73748697 3622905 720626..721108 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit J 721108 3622905 cbdb_A881 Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit J YP_307936.1 720626 D 255470 CDS YP_307937.1 73748698 3622906 721110..721415 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit K 721415 3622906 cbdb_A882 Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit K YP_307937.1 721110 D 255470 CDS YP_307938.1 73748699 3622907 721432..723396 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit L 723396 3622907 cbdb_A883 Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit L YP_307938.1 721432 D 255470 CDS YP_307939.1 73748700 3623691 723406..724899 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit M 724899 nuoM 3623691 nuoM Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit M YP_307939.1 723406 D 255470 CDS YP_307940.1 73748701 3623692 724918..726363 1 NC_007356.1 proton-translocating NADH-quinone oxidoreductase subunit N 726363 nuoN 3623692 nuoN Dehalococcoides mccartyi CBDB1 proton-translocating NADH-quinone oxidoreductase subunit N YP_307940.1 724918 D 255470 CDS YP_307941.1 73748702 3622908 726380..727168 1 NC_007356.1 TatD family hydrolase 727168 3622908 cbdb_A887 Dehalococcoides mccartyi CBDB1 TatD family hydrolase YP_307941.1 726380 D 255470 CDS YP_307942.1 73748703 3623686 complement(727148..727804) 1 NC_007356.1 endonuclease III 727804 nth 3623686 nth Dehalococcoides mccartyi CBDB1 endonuclease III YP_307942.1 727148 R 255470 CDS YP_307943.1 73748704 3623155 727929..729440 1 NC_007356.1 cobyric acid synthase CobQ 729440 cobQ 3623155 cobQ Dehalococcoides mccartyi CBDB1 cobyric acid synthase CobQ YP_307943.1 727929 D 255470 CDS YP_307944.1 73748705 3622909 729437..729847 1 NC_007356.1 thioesterase 729847 3622909 cbdb_A891 Dehalococcoides mccartyi CBDB1 thioesterase YP_307944.1 729437 D 255470 CDS YP_307945.1 73748706 3622910 complement(729855..730685) 1 NC_007356.1 branched chain amino acid ABC transporter ATP-binding protein 730685 3622910 cbdb_A892 Dehalococcoides mccartyi CBDB1 branched chain amino acid ABC transporter ATP-binding protein YP_307945.1 729855 R 255470 CDS YP_307946.1 73748707 3622911 complement(730672..730938) 1 NC_007356.1 hypothetical protein 730938 3622911 cbdb_A893 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307946.1 730672 R 255470 CDS YP_307947.1 73748708 3622912 complement(730948..732237) 1 NC_007356.1 acyl-CoA synthetase 732237 3622912 cbdb_A894 Dehalococcoides mccartyi CBDB1 acyl-CoA synthetase YP_307947.1 730948 R 255470 CDS YP_307948.1 73748709 3622913 complement(732228..733019) 1 NC_007356.1 branched chain amino acid ABC transporter ATP-binding protein 733019 3622913 cbdb_A895 Dehalococcoides mccartyi CBDB1 branched chain amino acid ABC transporter ATP-binding protein YP_307948.1 732228 R 255470 CDS YP_307949.1 73748710 3623093 complement(733040..734326) 1 NC_007356.1 branched chain amino acid ABC transporter substrate-binding protein 734326 3623093 cbdb_A896 Dehalococcoides mccartyi CBDB1 branched chain amino acid ABC transporter substrate-binding protein YP_307949.1 733040 R 255470 CDS YP_307950.1 73748711 3623094 complement(734415..735707) 1 NC_007356.1 branched chain amino acid ABC transporter substrate-binding protein 735707 3623094 cbdb_A897 Dehalococcoides mccartyi CBDB1 branched chain amino acid ABC transporter substrate-binding protein YP_307950.1 734415 R 255470 CDS YP_307951.1 73748712 3623095 complement(735750..736802) 1 NC_007356.1 branched-chain amino acid ABC transporter permease 736802 3623095 cbdb_A898 Dehalococcoides mccartyi CBDB1 branched-chain amino acid ABC transporter permease YP_307951.1 735750 R 255470 CDS YP_307952.1 73748713 3623096 complement(736805..737689) 1 NC_007356.1 branched-chain amino acid ABC transporter permease 737689 3623096 cbdb_A899 Dehalococcoides mccartyi CBDB1 branched-chain amino acid ABC transporter permease YP_307952.1 736805 R 255470 CDS YP_307953.1 73748714 3623098 complement(737699..739591) 1 NC_007356.1 acyl-CoA synthetase 739591 3623098 cbdb_A901 Dehalococcoides mccartyi CBDB1 acyl-CoA synthetase YP_307953.1 737699 R 255470 CDS YP_307954.1 73748715 3623988 739922..741718 1 NC_007356.1 indolepyruvate ferredoxin oxidoreductase subunit alpha 741718 iorA 3623988 iorA Dehalococcoides mccartyi CBDB1 indolepyruvate ferredoxin oxidoreductase subunit alpha YP_307954.1 739922 D 255470 CDS YP_307955.1 73748716 3623989 741723..742316 1 NC_007356.1 Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.; indolepyruvate oxidoreductase subunit beta 742316 iorB 3623989 iorB Dehalococcoides mccartyi CBDB1 indolepyruvate oxidoreductase subunit beta YP_307955.1 741723 D 255470 CDS YP_307956.1 73748717 3623099 complement(742313..742801) 1 NC_007356.1 hypothetical protein 742801 3623099 cbdb_A904 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307956.1 742313 R 255470 CDS YP_307957.1 73748718 3623100 complement(742816..743016) 1 NC_007356.1 hypothetical protein 743016 3623100 cbdb_A905 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307957.1 742816 R 255470 CDS YP_307958.1 73748719 3623101 complement(743018..743401) 1 NC_007356.1 NifU domain-containing protein 743401 3623101 cbdb_A906 Dehalococcoides mccartyi CBDB1 NifU domain-containing protein YP_307958.1 743018 R 255470 CDS YP_307959.1 73748720 3623102 743570..743824 1 NC_007356.1 hypothetical protein 743824 3623102 cbdb_A907 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307959.1 743570 D 255470 CDS YP_307960.1 73748721 3623103 743834..746320 1 NC_007356.1 copper-translocating P-type ATPase 746320 3623103 cbdb_A908 Dehalococcoides mccartyi CBDB1 copper-translocating P-type ATPase YP_307960.1 743834 D 255470 CDS YP_307961.1 73748722 3623104 746418..746906 1 NC_007356.1 heat shock protein 20 746906 3623104 cbdb_A909 Dehalococcoides mccartyi CBDB1 heat shock protein 20 YP_307961.1 746418 D 255470 CDS YP_307962.1 73748723 3623105 746959..747786 1 NC_007356.1 bacterioferritin domain-containing protein 747786 3623105 cbdb_A911 Dehalococcoides mccartyi CBDB1 bacterioferritin domain-containing protein YP_307962.1 746959 D 255470 CDS YP_307963.1 73748724 3622853 747816..748394 1 NC_007356.1 superoxide dismutase 748394 sodA 3622853 sodA Dehalococcoides mccartyi CBDB1 superoxide dismutase YP_307963.1 747816 D 255470 CDS YP_307964.1 73748725 3623106 complement(748492..749262) 1 NC_007356.1 hypothetical protein 749262 3623106 cbdb_A914 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307964.1 748492 R 255470 CDS YP_307965.1 73748726 3623107 complement(749695..749997) 1 NC_007356.1 Smr domain-containing protein 749997 3623107 cbdb_A915 Dehalococcoides mccartyi CBDB1 Smr domain-containing protein YP_307965.1 749695 R 255470 CDS YP_307966.1 73748727 3623897 750153..750959 1 NC_007356.1 Imidazole glycerol phosphate synthase cyclase subunit 750959 hisF 3623897 hisF Dehalococcoides mccartyi CBDB1 Imidazole glycerol phosphate synthase cyclase subunit YP_307966.1 750153 D 255470 CDS YP_307967.1 73748728 3623108 751018..752070 1 NC_007356.1 hypothetical protein 752070 3623108 cbdb_A918 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307967.1 751018 D 255470 CDS YP_307968.1 73748729 3623109 complement(752124..753374) 1 NC_007356.1 MiaB family tRNA modification protein 753374 3623109 cbdb_A919 Dehalococcoides mccartyi CBDB1 MiaB family tRNA modification protein YP_307968.1 752124 R 255470 CDS YP_307969.1 73748730 3623284 753463..754731 1 NC_007356.1 3-oxoacyl-ACP synthase 754731 fabF 3623284 fabF Dehalococcoides mccartyi CBDB1 3-oxoacyl-ACP synthase YP_307969.1 753463 D 255470 CDS YP_307970.1 73748731 3623405 754715..756415 1 NC_007356.1 single-stranded-DNA-specific exonuclease RecJ 756415 recJ 3623405 recJ Dehalococcoides mccartyi CBDB1 single-stranded-DNA-specific exonuclease RecJ YP_307970.1 754715 D 255470 CDS YP_307971.1 73748732 3623111 756431..757063 1 NC_007356.1 hypothetical protein 757063 3623111 cbdb_A924 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307971.1 756431 D 255470 CDS YP_307972.1 73748733 3624006 complement(757243..758025) 1 NC_007356.1 prolipoprotein diacylglyceryl transferase 758025 lgt 3624006 lgt Dehalococcoides mccartyi CBDB1 prolipoprotein diacylglyceryl transferase YP_307972.1 757243 R 255470 CDS YP_307973.1 73748734 3623112 complement(758096..760390) 1 NC_007356.1 ATP-dependent RNA helicase, DEAD 760390 3623112 cbdb_A928 Dehalococcoides mccartyi CBDB1 ATP-dependent RNA helicase, DEAD YP_307973.1 758096 R 255470 CDS YP_307974.1 73748735 3622914 complement(760402..760692) 1 NC_007356.1 hypothetical protein 760692 3622914 cbdb_A929 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307974.1 760402 R 255470 CDS YP_307975.1 73748736 3623770 760877..761140 1 NC_007356.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 761140 rpsO 3623770 rpsO Dehalococcoides mccartyi CBDB1 30S ribosomal protein S15 YP_307975.1 760877 D 255470 CDS YP_307976.1 73748737 3623977 761182..763344 1 NC_007356.1 polynucleotide phosphorylase 763344 pnp 3623977 pnp Dehalococcoides mccartyi CBDB1 polynucleotide phosphorylase YP_307976.1 761182 D 255470 CDS YP_307977.1 73748738 3623171 763361..764152 1 NC_007356.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 764152 dapB 3623171 dapB Dehalococcoides mccartyi CBDB1 dihydrodipicolinate reductase YP_307977.1 763361 D 255470 CDS YP_307978.1 73748739 3622651 764163..765179 1 NC_007356.1 aspartate-semialdehyde dehydrogenase 765179 asd 3622651 asd Dehalococcoides mccartyi CBDB1 aspartate-semialdehyde dehydrogenase YP_307978.1 764163 D 255470 CDS YP_307979.1 73748740 3623170 765182..766075 1 NC_007356.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 766075 dapA 3623170 dapA Dehalococcoides mccartyi CBDB1 dihydrodipicolinate synthase YP_307979.1 765182 D 255470 CDS YP_307980.1 73748741 3622915 766077..766742 1 NC_007356.1 puromycin N-acetyltransferase,-like protein 766742 3622915 cbdb_A936 Dehalococcoides mccartyi CBDB1 puromycin N-acetyltransferase,-like protein YP_307980.1 766077 D 255470 CDS YP_307981.1 73748742 3622916 766702..767331 1 NC_007356.1 acetyltransferase 767331 3622916 cbdb_A937 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_307981.1 766702 D 255470 CDS YP_307982.1 73748743 3623661 complement(767451..768722) 1 NC_007356.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 768722 purA 3623661 purA Dehalococcoides mccartyi CBDB1 adenylosuccinate synthetase YP_307982.1 767451 R 255470 CDS YP_307983.1 73748744 3622917 complement(768828..769409) 1 NC_007356.1 CDP-alcohol phosphatidyltransferase 769409 3622917 cbdb_A940 Dehalococcoides mccartyi CBDB1 CDP-alcohol phosphatidyltransferase YP_307983.1 768828 R 255470 CDS YP_307984.1 73748745 3622918 complement(769454..770602) 1 NC_007356.1 glycoside hydrolase family protein 770602 3622918 cbdb_A942 Dehalococcoides mccartyi CBDB1 glycoside hydrolase family protein YP_307984.1 769454 R 255470 CDS YP_307985.1 73748746 3622919 complement(770647..771759) 1 NC_007356.1 myo-inositol-1-phosphate synthase 771759 3622919 cbdb_A943 Dehalococcoides mccartyi CBDB1 myo-inositol-1-phosphate synthase YP_307985.1 770647 R 255470 CDS YP_307986.1 73748747 3622920 complement(771903..772076) 1 NC_007356.1 hypothetical protein 772076 3622920 cbdb_A944 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307986.1 771903 R 255470 CDS YP_307987.1 73748748 3623816 complement(772123..773025) 1 NC_007356.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 773025 truB 3623816 truB Dehalococcoides mccartyi CBDB1 tRNA pseudouridine synthase B YP_307987.1 772123 R 255470 CDS YP_307988.1 73748749 3623212 complement(773028..773384) 1 NC_007356.1 ribosome-binding factor A 773384 rbfA 3623212 rbfA Dehalococcoides mccartyi CBDB1 ribosome-binding factor A YP_307988.1 773028 R 255470 CDS YP_307989.1 73748750 3623986 complement(773384..775165) 1 NC_007356.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 775165 infB 3623986 infB Dehalococcoides mccartyi CBDB1 translation initiation factor IF-2 YP_307989.1 773384 R 255470 CDS YP_307990.1 73748751 3622921 complement(775146..775460) 1 NC_007356.1 hypothetical protein 775460 3622921 cbdb_A948 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307990.1 775146 R 255470 CDS YP_307991.1 73748752 3623693 complement(775435..776910) 1 NC_007356.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 776910 nusA 3623693 nusA Dehalococcoides mccartyi CBDB1 transcription elongation factor NusA YP_307991.1 775435 R 255470 CDS YP_307992.1 73748753 3622922 777100..778620 1 NC_007356.1 Mg chelatase,-like protein 778620 3622922 cbdb_A950 Dehalococcoides mccartyi CBDB1 Mg chelatase,-like protein YP_307992.1 777100 D 255470 CDS YP_307993.1 73748754 3622923 778622..779497 1 NC_007356.1 acetyltransferase 779497 3622923 cbdb_A951 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_307993.1 778622 D 255470 CDS YP_307994.1 73748755 3622924 complement(779542..779859) 1 NC_007356.1 acetyltransferase 779859 3622924 cbdb_A952 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_307994.1 779542 R 255470 CDS YP_307995.1 73748756 3622925 780078..780722 1 NC_007356.1 hypothetical protein 780722 3622925 cbdb_A953 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_307995.1 780078 D 255470 CDS YP_307996.1 73748757 3623396 complement(780803..781174) 1 NC_007356.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 781174 rplL 3623396 rplL Dehalococcoides mccartyi CBDB1 50S ribosomal protein L7/L12 YP_307996.1 780803 R 255470 CDS YP_307997.1 73748758 3623394 complement(781208..781738) 1 NC_007356.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 781738 rplJ 3623394 rplJ Dehalococcoides mccartyi CBDB1 50S ribosomal protein L10 YP_307997.1 781208 R 255470 CDS YP_307998.1 73748759 3623387 complement(781890..782603) 1 NC_007356.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 782603 rplA 3623387 rplA Dehalococcoides mccartyi CBDB1 50S ribosomal protein L1 YP_307998.1 781890 R 255470 CDS YP_307999.1 73748760 3623395 complement(782607..783029) 1 NC_007356.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 783029 rplK 3623395 rplK Dehalococcoides mccartyi CBDB1 50S ribosomal protein L11 YP_307999.1 782607 R 255470 CDS YP_308000.1 73748761 3623695 complement(783048..783581) 1 NC_007356.1 transcription antitermination protein NusG 783581 nusG 3623695 nusG Dehalococcoides mccartyi CBDB1 transcription antitermination protein NusG YP_308000.1 783048 R 255470 CDS YP_308001.1 73748762 3623783 complement(783628..783846) 1 NC_007356.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 783846 secE 3623783 secE Dehalococcoides mccartyi CBDB1 preprotein translocase subunit SecE YP_308001.1 783628 R 255470 CDS YP_308002.1 73748763 3623376 complement(783870..784037) 1 NC_007356.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 784037 rpmG 3623376 rpmG Dehalococcoides mccartyi CBDB1 50S ribosomal protein L33 YP_308002.1 783870 R 255470 CDS YP_308003.1 73748764 3623820 complement(784039..785241) 1 NC_007356.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 785241 tuf 3623820 tuf Dehalococcoides mccartyi CBDB1 elongation factor Tu YP_308003.1 784039 R 255470 CDS YP_308004.1 73748765 3622926 complement(785767..786480) 1 NC_007356.1 hypothetical protein 786480 3622926 cbdb_A962 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308004.1 785767 R 255470 CDS YP_308005.1 73748766 3622927 complement(786493..787710) 1 NC_007356.1 glycoside hydrolase family protein 787710 3622927 cbdb_A963 Dehalococcoides mccartyi CBDB1 glycoside hydrolase family protein YP_308005.1 786493 R 255470 CDS YP_308006.1 73748767 3622928 complement(787703..788692) 1 NC_007356.1 hypothetical protein 788692 3622928 cbdb_A964 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308006.1 787703 R 255470 CDS YP_308007.1 73748768 3622962 complement(788694..788810) 1 NC_007356.1 hypothetical protein 788810 3622962 cbdb_B21 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308007.1 788694 R 255470 CDS YP_308008.1 73748769 3622929 788822..789160 1 NC_007356.1 ArsR family transcriptional regulator 789160 3622929 cbdb_A966 Dehalococcoides mccartyi CBDB1 ArsR family transcriptional regulator YP_308008.1 788822 D 255470 CDS YP_308009.1 73748770 3622930 789160..790191 1 NC_007356.1 permease 790191 3622930 cbdb_A968 Dehalococcoides mccartyi CBDB1 permease YP_308009.1 789160 D 255470 CDS YP_308010.1 73748771 3622931 790209..790451 1 NC_007356.1 redox-active disulfide protein 2 790451 3622931 cbdb_A969 Dehalococcoides mccartyi CBDB1 redox-active disulfide protein 2 YP_308010.1 790209 D 255470 CDS YP_308011.1 73748772 3622932 complement(790525..791337) 1 NC_007356.1 hypothetical protein 791337 3622932 cbdb_A971 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308011.1 790525 R 255470 CDS YP_308012.1 73748773 3622933 complement(791661..792932) 1 NC_007356.1 major facilitator family transporter 792932 3622933 cbdb_A973 Dehalococcoides mccartyi CBDB1 major facilitator family transporter YP_308012.1 791661 R 255470 CDS YP_308013.1 73748774 3622934 complement(793080..793220) 1 NC_007356.1 hypothetical protein 793220 3622934 cbdb_A974 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308013.1 793080 R 255470 CDS YP_308014.1 73748775 3622935 793286..793525 1 NC_007356.1 hypothetical protein 793525 3622935 cbdb_A975 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308014.1 793286 D 255470 CDS YP_308015.1 73748776 3622936 complement(793509..794129) 1 NC_007356.1 hypothetical protein 794129 3622936 cbdb_A976 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308015.1 793509 R 255470 CDS YP_308016.1 73748777 3622937 794234..794476 1 NC_007356.1 hypothetical protein 794476 3622937 cbdb_A979 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308016.1 794234 D 255470 CDS YP_308017.1 73748778 3622939 complement(794660..795169) 1 NC_007356.1 hypothetical protein 795169 3622939 cbdb_A981 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308017.1 794660 R 255470 CDS YP_308018.1 73748779 3622940 complement(795210..795446) 1 NC_007356.1 hypothetical protein 795446 3622940 cbdb_A982 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308018.1 795210 R 255470 CDS YP_308019.1 73748780 3622941 complement(795696..795947) 1 NC_007356.1 hypothetical protein 795947 3622941 cbdb_A983 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308019.1 795696 R 255470 CDS YP_308020.1 73748781 3622942 complement(796149..796538) 1 NC_007356.1 ACT domain-containing protein 796538 3622942 cbdb_A985 Dehalococcoides mccartyi CBDB1 ACT domain-containing protein YP_308020.1 796149 R 255470 CDS YP_308021.1 73748782 3622943 complement(796559..797878) 1 NC_007356.1 acyl-CoA synthetase 797878 3622943 cbdb_A988 Dehalococcoides mccartyi CBDB1 acyl-CoA synthetase YP_308021.1 796559 R 255470 CDS YP_308022.1 73748783 3622944 complement(798106..801894) 1 NC_007356.1 sensor histidine kinase/response regulator 801894 3622944 cbdb_A989 Dehalococcoides mccartyi CBDB1 sensor histidine kinase/response regulator YP_308022.1 798106 R 255470 CDS YP_308023.1 73748784 3622946 complement(802165..802734) 1 NC_007356.1 hypothetical protein 802734 3622946 cbdb_A990 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308023.1 802165 R 255470 CDS YP_308024.1 73748785 3622947 complement(802779..802880) 1 NC_007356.1 hypothetical protein 802880 3622947 cbdb_A991 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308024.1 802779 R 255470 CDS YP_308025.1 73748786 3622948 complement(805189..805350) 1 NC_007356.1 hypothetical protein 805350 3622948 cbdb_A992 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308025.1 805189 R 255470 CDS YP_308026.1 73748787 3622949 complement(805537..805704) 1 NC_007356.1 hypothetical protein 805704 3622949 cbdb_A993 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308026.1 805537 R 255470 CDS YP_308027.1 73748788 3623382 806931..807644 1 NC_007356.1 ribonuclease III 807644 rnc 3623382 rnc Dehalococcoides mccartyi CBDB1 ribonuclease III YP_308027.1 806931 D 255470 CDS YP_308028.1 73748789 3622950 807674..807814 1 NC_007356.1 hypothetical protein 807814 3622950 cbdb_A995 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308028.1 807674 D 255470 CDS YP_308029.1 73748790 3622951 807836..808111 1 NC_007356.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 808111 3622951 cbdb_A998 Dehalococcoides mccartyi CBDB1 acylphosphatase YP_308029.1 807836 D 255470 CDS YP_308030.1 73748791 3622952 complement(808138..808872) 1 NC_007356.1 hypothetical protein 808872 3622952 cbdb_A999 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308030.1 808138 R 255470 CDS YP_308031.1 73748792 3623437 complement(808869..809123) 1 NC_007356.1 hypothetical protein 809123 3623437 cbdb_A1000 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308031.1 808869 R 255470 CDS YP_308032.1 73748793 3623963 complement(809403..810896) 1 NC_007356.1 cytosol aminopeptidase 810896 pepA 3623963 pepA Dehalococcoides mccartyi CBDB1 cytosol aminopeptidase YP_308032.1 809403 R 255470 CDS YP_308033.1 73748794 3623438 complement(810896..811498) 1 NC_007356.1 hypothetical protein 811498 3623438 cbdb_A1002 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308033.1 810896 R 255470 CDS YP_308034.1 73748795 3623439 complement(811547..812404) 1 NC_007356.1 degV family protein 812404 3623439 cbdb_A1004 Dehalococcoides mccartyi CBDB1 degV family protein YP_308034.1 811547 R 255470 CDS YP_308035.1 73748796 3623440 complement(812487..814004) 1 NC_007356.1 acyl-CoA synthetase 814004 3623440 cbdb_A1006 Dehalococcoides mccartyi CBDB1 acyl-CoA synthetase YP_308035.1 812487 R 255470 CDS YP_308036.1 73748797 3623441 814574..815938 1 NC_007356.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 815938 3623441 cbdb_A1008 Dehalococcoides mccartyi CBDB1 tryptophan synthase subunit beta YP_308036.1 814574 D 255470 CDS YP_308037.1 73748798 3623627 816061..816876 1 NC_007356.1 serine protease DegP 816876 3623627 cbdb_A1009 Dehalococcoides mccartyi CBDB1 serine protease DegP YP_308037.1 816061 D 255470 CDS YP_308038.1 73748799 3623629 816885..818018 1 NC_007356.1 serine protease DegP 818018 3623629 cbdb_A1011 Dehalococcoides mccartyi CBDB1 serine protease DegP YP_308038.1 816885 D 255470 CDS YP_308039.1 73748800 3623543 complement(818031..821075) 1 NC_007356.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 821075 ileS 3623543 ileS Dehalococcoides mccartyi CBDB1 isoleucyl-tRNA synthetase YP_308039.1 818031 R 255470 CDS YP_308040.1 73748801 3623630 complement(821378..821959) 1 NC_007356.1 SpoIIIJ-associated protein Jag 821959 3623630 cbdb_A1014 Dehalococcoides mccartyi CBDB1 SpoIIIJ-associated protein Jag YP_308040.1 821378 R 255470 CDS YP_308041.1 73748802 3623631 complement(821970..822917) 1 NC_007356.1 inner membrane protein, 60 kDa 822917 3623631 cbdb_A1015 Dehalococcoides mccartyi CBDB1 inner membrane protein, 60 kDa YP_308041.1 821970 R 255470 CDS YP_308042.1 73748803 3623632 complement(822929..824044) 1 NC_007356.1 hypothetical protein 824044 3623632 cbdb_A1016 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308042.1 822929 R 255470 CDS YP_308043.1 73748804 3623384 complement(824238..824600) 1 NC_007356.1 ribonuclease P protein component 824600 rnpA 3623384 rnpA Dehalococcoides mccartyi CBDB1 ribonuclease P protein component YP_308043.1 824238 R 255470 CDS YP_308044.1 73748805 3623789 complement(824659..824799) 1 NC_007356.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 824799 rpmH 3623789 rpmH Dehalococcoides mccartyi CBDB1 50S ribosomal protein L34 YP_308044.1 824659 R 255470 CDS YP_308045.1 73748806 3623773 complement(824835..825278) 1 NC_007356.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 825278 rpsR 3623773 rpsR Dehalococcoides mccartyi CBDB1 30S ribosomal protein S18 YP_308045.1 824835 R 255470 CDS YP_308046.1 73748807 3622855 complement(825313..825720) 1 NC_007356.1 single-strand binding protein 825720 ssb 3622855 ssb Dehalococcoides mccartyi CBDB1 single-strand binding protein YP_308046.1 825313 R 255470 CDS YP_308047.1 73748808 3623800 complement(825771..826100) 1 NC_007356.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 826100 rpsF 3623800 rpsF Dehalococcoides mccartyi CBDB1 30S ribosomal protein S6 YP_308047.1 825771 R 255470 CDS YP_308048.1 73748809 3623634 826622..826864 1 NC_007356.1 hypothetical protein 826864 3623634 cbdb_A1021 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308048.1 826622 D 255470 CDS YP_308049.1 73748810 3623635 complement(826937..827314) 1 NC_007356.1 translation initiation inhibitor 827314 3623635 cbdb_A1023 Dehalococcoides mccartyi CBDB1 translation initiation inhibitor YP_308049.1 826937 R 255470 CDS YP_308050.1 73748811 3623636 827445..828770 1 NC_007356.1 hypothetical protein 828770 3623636 cbdb_A1024 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308050.1 827445 D 255470 CDS YP_308051.1 73748812 3623637 complement(828859..829998) 1 NC_007356.1 cell division protein 829998 3623637 cbdb_A1025 Dehalococcoides mccartyi CBDB1 cell division protein YP_308051.1 828859 R 255470 CDS YP_308052.1 73748813 3623406 830182..831948 1 NC_007356.1 DNA repair protein RecN 831948 recN 3623406 recN Dehalococcoides mccartyi CBDB1 DNA repair protein RecN YP_308052.1 830182 D 255470 CDS YP_308053.1 73748814 3623638 831951..832814 1 NC_007356.1 transporter 832814 3623638 cbdb_A1028 Dehalococcoides mccartyi CBDB1 transporter YP_308053.1 831951 D 255470 CDS YP_308054.1 73748815 3623640 832921..833445 1 NC_007356.1 hypothetical protein 833445 3623640 cbdb_A1030 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308054.1 832921 D 255470 CDS YP_308055.1 73748816 3623641 833548..834231 1 NC_007356.1 DNA-binding response regulator 834231 3623641 cbdb_A1032 Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308055.1 833548 D 255470 CDS YP_308056.1 73748817 3623642 834239..835660 1 NC_007356.1 sensor histidine kinase 835660 3623642 cbdb_A1033 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308056.1 834239 D 255470 CDS YP_308057.1 73748818 3623643 complement(835685..836662) 1 NC_007356.1 peptide ABC transporter ATP-binding protein 836662 3623643 cbdb_A1034 Dehalococcoides mccartyi CBDB1 peptide ABC transporter ATP-binding protein YP_308057.1 835685 R 255470 CDS YP_308058.1 73748819 3623644 complement(836647..837654) 1 NC_007356.1 peptide ABC transporter ATP-binding protein 837654 3623644 cbdb_A1036 Dehalococcoides mccartyi CBDB1 peptide ABC transporter ATP-binding protein YP_308058.1 836647 R 255470 CDS YP_308059.1 73748820 3623645 complement(837656..838561) 1 NC_007356.1 peptide ABC transporter permease 838561 3623645 cbdb_A1037 Dehalococcoides mccartyi CBDB1 peptide ABC transporter permease YP_308059.1 837656 R 255470 CDS YP_308060.1 73748821 3623646 complement(838569..839486) 1 NC_007356.1 peptide ABC transporter permease 839486 3623646 cbdb_A1038 Dehalococcoides mccartyi CBDB1 peptide ABC transporter permease YP_308060.1 838569 R 255470 CDS YP_308061.1 73748822 3623559 complement(839563..841239) 1 NC_007356.1 dipeptide/oligopeptide/nickel ABC transporter periplasmic protein 841239 3623559 cbdb_A1039 Dehalococcoides mccartyi CBDB1 dipeptide/oligopeptide/nickel ABC transporter periplasmic protein YP_308061.1 839563 R 255470 CDS YP_308062.1 73748823 3623561 841485..842891 1 NC_007356.1 metallo-beta-lactamase 842891 3623561 cbdb_A1040 Dehalococcoides mccartyi CBDB1 metallo-beta-lactamase YP_308062.1 841485 D 255470 CDS YP_308063.1 73748824 3623562 complement(843260..843958) 1 NC_007356.1 LuxR family transcriptional regulator 843958 3623562 cbdb_A1041 Dehalococcoides mccartyi CBDB1 LuxR family transcriptional regulator YP_308063.1 843260 R 255470 CDS YP_308064.1 73748825 3623563 complement(843955..847644) 1 NC_007356.1 sensor histidine kinase 847644 3623563 cbdb_A1042 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308064.1 843955 R 255470 CDS YP_308065.1 73748826 3623564 847778..848959 1 NC_007356.1 RNA methyltransferase 848959 3623564 cbdb_A1043 Dehalococcoides mccartyi CBDB1 RNA methyltransferase YP_308065.1 847778 D 255470 CDS YP_308066.1 73748827 3623565 848995..849384 1 NC_007356.1 hypothetical protein 849384 3623565 cbdb_A1044 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308066.1 848995 D 255470 CDS YP_308067.1 73748828 3623566 849381..849530 1 NC_007356.1 hypothetical protein 849530 3623566 cbdb_A1045 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308067.1 849381 D 255470 CDS YP_308068.1 73748829 3623743 849559..850233 1 NC_007356.1 maf-like protein 850233 maF 3623743 maF Dehalococcoides mccartyi CBDB1 maf-like protein YP_308068.1 849559 D 255470 CDS YP_308069.1 73748830 3623567 complement(850278..850703) 1 NC_007356.1 hypothetical protein 850703 3623567 cbdb_A1048 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308069.1 850278 R 255470 CDS YP_308070.1 73748831 3623768 complement(850731..852431) 1 NC_007356.1 glutamine-dependent NAD(+) synthetase 852431 nadE 3623768 nadE Dehalococcoides mccartyi CBDB1 glutamine-dependent NAD(+) synthetase YP_308070.1 850731 R 255470 CDS YP_308071.1 73748832 3623601 complement(852516..853847) 1 NC_007356.1 glutamine synthetase, type I 853847 glnA 3623601 glnA Dehalococcoides mccartyi CBDB1 glutamine synthetase, type I YP_308071.1 852516 R 255470 CDS YP_308072.1 73748833 3623603 complement(853974..854312) 1 NC_007356.1 P2-like signal transmitter protein GlnB 854312 glnB 3623603 glnB Dehalococcoides mccartyi CBDB1 P2-like signal transmitter protein GlnB YP_308072.1 853974 R 255470 CDS YP_308073.1 73748834 3623266 complement(854309..855535) 1 NC_007356.1 ammonium transporter 855535 amt 3623266 amt Dehalococcoides mccartyi CBDB1 ammonium transporter YP_308073.1 854309 R 255470 CDS YP_308074.1 73748835 3623569 complement(855674..856345) 1 NC_007356.1 response regulator 856345 3623569 cbdb_A1053 Dehalococcoides mccartyi CBDB1 response regulator YP_308074.1 855674 R 255470 CDS YP_308075.1 73748836 3623570 complement(856367..857137) 1 NC_007356.1 hypothetical protein 857137 3623570 cbdb_A1054 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308075.1 856367 R 255470 CDS YP_308076.1 73748837 3623571 complement(857138..858640) 1 NC_007356.1 glutamate synthase subunit alpha 858640 3623571 cbdb_A1055 Dehalococcoides mccartyi CBDB1 glutamate synthase subunit alpha YP_308076.1 857138 R 255470 CDS YP_308077.1 73748838 3623071 complement(858642..859403) 1 NC_007356.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 859403 hisF 3623071 hisF Dehalococcoides mccartyi CBDB1 imidazole glycerol phosphate synthase subunit HisF YP_308077.1 858642 R 255470 CDS YP_308078.1 73748839 3623572 complement(859397..860527) 1 NC_007356.1 glutamine amidotransferase 860527 3623572 cbdb_A1058 Dehalococcoides mccartyi CBDB1 glutamine amidotransferase YP_308078.1 859397 R 255470 CDS YP_308079.1 73748840 3623573 complement(860540..861847) 1 NC_007356.1 pyridine nucleotide-disulfide oxidoreductase 861847 3623573 cbdb_A1059 Dehalococcoides mccartyi CBDB1 pyridine nucleotide-disulfide oxidoreductase YP_308079.1 860540 R 255470 CDS YP_308080.1 73748841 3623898 complement(861844..862461) 1 NC_007356.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 862461 hisH 3623898 hisH Dehalococcoides mccartyi CBDB1 imidazole glycerol phosphate synthase subunit HisH YP_308080.1 861844 R 255470 CDS YP_308081.1 73748842 3623575 complement(862477..862908) 1 NC_007356.1 (Fe-S)-binding protein 862908 3623575 cbdb_A1061 Dehalococcoides mccartyi CBDB1 (Fe-S)-binding protein YP_308081.1 862477 R 255470 CDS YP_308082.1 73748843 3623576 complement(863040..863621) 1 NC_007356.1 hypothetical protein 863621 3623576 cbdb_A1062 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308082.1 863040 R 255470 CDS YP_308083.1 73748844 3623168 863743..864705 1 NC_007356.1 O-acetylserine(thiol)-lyase-A-like protein 864705 cysK 3623168 cysK Dehalococcoides mccartyi CBDB1 O-acetylserine(thiol)-lyase-A-like protein YP_308083.1 863743 D 255470 CDS YP_308084.1 73748845 3623577 complement(864805..865311) 1 NC_007356.1 hypothetical protein 865311 3623577 cbdb_A1064 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308084.1 864805 R 255470 CDS YP_308085.1 73748846 3623420 865479..866300 1 NC_007356.1 radical SAM domain-containing protein 866300 rdhI 3623420 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_308085.1 865479 D 255470 CDS YP_308086.1 73748847 3623152 866351..867274 1 NC_007356.1 cobalamin biosynthesis protein 867274 cobD 3623152 cobD Dehalococcoides mccartyi CBDB1 cobalamin biosynthesis protein YP_308086.1 866351 D 255470 CDS YP_308087.1 73748848 3623658 867310..867858 1 NC_007356.1 cob(I)alamin adenosyltransferase 867858 cobA 3623658 cobA Dehalococcoides mccartyi CBDB1 cob(I)alamin adenosyltransferase YP_308087.1 867310 D 255470 CDS YP_308088.1 73748849 3623579 867858..868640 1 NC_007356.1 carbon-nitrogen hydrolase 868640 3623579 cbdb_A1070 Dehalococcoides mccartyi CBDB1 carbon-nitrogen hydrolase YP_308088.1 867858 D 255470 CDS YP_308089.1 73748850 3623580 868674..870113 1 NC_007356.1 glycosyl transferase family protein 870113 3623580 cbdb_A1071 Dehalococcoides mccartyi CBDB1 glycosyl transferase family protein YP_308089.1 868674 D 255470 CDS YP_308090.1 73748851 3623581 870123..870785 1 NC_007356.1 hypothetical protein 870785 3623581 cbdb_A1072 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308090.1 870123 D 255470 CDS YP_308091.1 73748852 3623582 complement(870782..871603) 1 NC_007356.1 hypothetical protein 871603 3623582 cbdb_A1073 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308091.1 870782 R 255470 CDS YP_308092.1 73748853 3623583 871756..872487 1 NC_007356.1 hypothetical protein 872487 3623583 cbdb_A1074 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308092.1 871756 D 255470 CDS YP_308093.1 73748854 3623584 complement(872580..873323) 1 NC_007356.1 LuxR family transcriptional regulator 873323 3623584 cbdb_A1075 Dehalococcoides mccartyi CBDB1 LuxR family transcriptional regulator YP_308093.1 872580 R 255470 CDS YP_308094.1 73748855 3623585 complement(873532..876207) 1 NC_007356.1 acetyl-CoA synthetase 876207 3623585 cbdb_A1077 Dehalococcoides mccartyi CBDB1 acetyl-CoA synthetase YP_308094.1 873532 R 255470 CDS YP_308095.1 73748856 3622963 complement(876257..876340) 1 NC_007356.1 hypothetical protein 876340 3622963 cbdb_B23 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308095.1 876257 R 255470 CDS YP_308096.1 73748857 3623586 876339..876509 1 NC_007356.1 hypothetical protein 876509 3623586 cbdb_A1078 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308096.1 876339 D 255470 CDS YP_308097.1 73748858 3623340 876686..877126 1 NC_007356.1 hypothetical protein 877126 3623340 cbdb_A1080 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308097.1 876686 D 255470 CDS YP_308098.1 73748859 3623341 complement(877302..877709) 1 NC_007356.1 FUR family transcriptional regulator 877709 3623341 cbdb_A1081 Dehalococcoides mccartyi CBDB1 FUR family transcriptional regulator YP_308098.1 877302 R 255470 CDS YP_308099.1 73748860 3623342 complement(877850..878635) 1 NC_007356.1 hypothetical protein 878635 3623342 cbdb_A1082 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308099.1 877850 R 255470 CDS YP_308100.1 73748861 3622866 878796..879344 1 NC_007356.1 PadR-like family transcriptional regulator 879344 3622866 cbdb_A1083 Dehalococcoides mccartyi CBDB1 PadR-like family transcriptional regulator YP_308100.1 878796 D 255470 CDS YP_308101.1 73748862 3622867 879535..880014 1 NC_007356.1 MarR family transcriptional regulator 880014 3622867 cbdb_A1085 Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308101.1 879535 D 255470 CDS YP_308102.1 73748863 3622868 880058..882283 1 NC_007356.1 ABC transporter ATP-binding protein/permease 882283 3622868 cbdb_A1086 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein/permease YP_308102.1 880058 D 255470 CDS YP_308103.1 73748864 3622869 882280..884190 1 NC_007356.1 ABC transporter ATP-binding protein/permease 884190 3622869 cbdb_A1087 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein/permease YP_308103.1 882280 D 255470 CDS YP_308104.1 73748865 3622870 884287..884595 1 NC_007356.1 (Fe-S)-binding protein 884595 3622870 cbdb_A1088 Dehalococcoides mccartyi CBDB1 (Fe-S)-binding protein YP_308104.1 884287 D 255470 CDS YP_308105.1 73748866 3622871 884626..884742 1 NC_007356.1 hypothetical protein 884742 3622871 cbdb_A1089 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308105.1 884626 D 255470 CDS YP_308106.1 73748867 3623428 complement(885119..885580) 1 NC_007356.1 MarR family transcriptional regulator 885580 rdhR 3623428 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308106.1 885119 R 255470 CDS YP_308107.1 73748868 3623213 885869..887467 1 NC_007356.1 reductive dehalogenase 887467 rdhA 3623213 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308107.1 885869 D 255470 CDS YP_308108.1 73748869 3623484 887469..887765 1 NC_007356.1 reductive dehalogenase anchoring protein 887765 rdhB 3623484 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308108.1 887469 D 255470 CDS YP_308109.1 73748870 3622873 887822..888124 1 NC_007356.1 hypothetical protein 888124 3622873 cbdb_A1095 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308109.1 887822 D 255470 CDS YP_308110.1 73748871 3622964 888127..888597 1 NC_007356.1 hypothetical protein 888597 3622964 cbdb_B24 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308110.1 888127 D 255470 CDS YP_308111.1 73748872 3622965 888688..888927 1 NC_007356.1 hypothetical protein 888927 3622965 cbdb_B25 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308111.1 888688 D 255470 CDS YP_308112.1 73748873 3623116 888911..889675 1 NC_007356.1 hypothetical protein 889675 rdhF 3623116 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308112.1 888911 D 255470 CDS YP_308113.1 73748874 3622874 complement(889834..890481) 1 NC_007356.1 BioY family protein 890481 3622874 cbdb_A1098 Dehalococcoides mccartyi CBDB1 BioY family protein YP_308113.1 889834 R 255470 CDS YP_308114.1 73748875 3622875 complement(890534..890770) 1 NC_007356.1 hypothetical protein 890770 3622875 cbdb_A1099 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308114.1 890534 R 255470 CDS YP_308115.1 73748876 3622876 890914..891165 1 NC_007356.1 hypothetical protein 891165 3622876 cbdb_A1100 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308115.1 890914 D 255470 CDS YP_308116.1 73748877 3623378 complement(891162..891629) 1 NC_007356.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 891629 ribH 3623378 ribH Dehalococcoides mccartyi CBDB1 6,7-dimethyl-8-ribityllumazine synthase YP_308116.1 891162 R 255470 CDS YP_308117.1 73748878 3623413 complement(891658..892869) 1 NC_007356.1 3,4-dihydroxy-2-butanone 4-phosphate synthase 892869 ribA 3623413 ribA Dehalococcoides mccartyi CBDB1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_308117.1 891658 R 255470 CDS YP_308118.1 73748879 3623415 complement(892902..893519) 1 NC_007356.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 893519 ribE 3623415 ribE Dehalococcoides mccartyi CBDB1 riboflavin synthase subunit alpha YP_308118.1 892902 R 255470 CDS YP_308119.1 73748880 3623414 complement(893522..894619) 1 NC_007356.1 riboflavin biosynthesis protein RibD 894619 ribD 3623414 ribD Dehalococcoides mccartyi CBDB1 riboflavin biosynthesis protein RibD YP_308119.1 893522 R 255470 CDS YP_308120.1 73748881 3622877 complement(894765..895529) 1 NC_007356.1 hypothetical protein 895529 3622877 cbdb_A1106 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308120.1 894765 R 255470 CDS YP_308121.1 73748882 3623999 895633..896211 1 NC_007356.1 signal peptidase I 896211 lepB 3623999 lepB Dehalococcoides mccartyi CBDB1 signal peptidase I YP_308121.1 895633 D 255470 CDS YP_308122.1 73748883 3623675 896214..896777 1 NC_007356.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 896777 pyrE 3623675 pyrE Dehalococcoides mccartyi CBDB1 orotate phosphoribosyltransferase YP_308122.1 896214 D 255470 CDS YP_308123.1 73748884 3622878 896806..897333 1 NC_007356.1 hypothetical protein 897333 3622878 cbdb_A1109 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308123.1 896806 D 255470 CDS YP_308124.1 73748885 3623761 complement(897330..899030) 1 NC_007356.1 DNA mismatch repair protein, MutL 899030 mutL 3623761 mutL Dehalococcoides mccartyi CBDB1 DNA mismatch repair protein, MutL YP_308124.1 897330 R 255470 CDS YP_308125.1 73748886 3623298 complement(899129..901345) 1 NC_007356.1 ATP-dependent DNA helicase PcrA 901345 pcrA 3623298 pcrA Dehalococcoides mccartyi CBDB1 ATP-dependent DNA helicase PcrA YP_308125.1 899129 R 255470 CDS YP_308126.1 73748887 3623209 901613..902161 1 NC_007356.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 902161 pyrR 3623209 pyrR Dehalococcoides mccartyi CBDB1 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_308126.1 901613 D 255470 CDS YP_308127.1 73748888 3623672 902164..903159 1 NC_007356.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 903159 pyrB 3623672 pyrB Dehalococcoides mccartyi CBDB1 aspartate carbamoyltransferase YP_308127.1 902164 D 255470 CDS YP_308128.1 73748889 3623673 903162..904448 1 NC_007356.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 904448 pyrC 3623673 pyrC Dehalococcoides mccartyi CBDB1 dihydroorotase YP_308128.1 903162 D 255470 CDS YP_308129.1 73748890 3622769 904484..905578 1 NC_007356.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 905578 carA 3622769 carA Dehalococcoides mccartyi CBDB1 carbamoyl phosphate synthase small subunit YP_308129.1 904484 D 255470 CDS YP_308130.1 73748891 3622770 905604..908873 1 NC_007356.1 carbamoyl-phosphate synthase large subunit 908873 carB 3622770 carB Dehalococcoides mccartyi CBDB1 carbamoyl-phosphate synthase large subunit YP_308130.1 905604 D 255470 CDS YP_308131.1 73748892 3623679 908883..909668 1 NC_007356.1 dihydroorotate dehydrogenase, electron transfersubunit 909668 pyrK 3623679 pyrK Dehalococcoides mccartyi CBDB1 dihydroorotate dehydrogenase, electron transfersubunit YP_308131.1 908883 D 255470 CDS YP_308132.1 73748893 3622836 complement(909750..910319) 1 NC_007356.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 910319 folE 3622836 folE Dehalococcoides mccartyi CBDB1 GTP cyclohydrolase I YP_308132.1 909750 R 255470 CDS YP_308133.1 73748894 3623354 complement(910354..911400) 1 NC_007356.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 911400 thrC 3623354 thrC Dehalococcoides mccartyi CBDB1 threonine synthase YP_308133.1 910354 R 255470 CDS YP_308134.1 73748895 3623750 complement(911409..912710) 1 NC_007356.1 homoserine dehydrogenase 912710 metM 3623750 metM Dehalococcoides mccartyi CBDB1 homoserine dehydrogenase YP_308134.1 911409 R 255470 CDS YP_308135.1 73748896 3622880 complement(912728..913996) 1 NC_007356.1 protein export protein 913996 3622880 cbdb_A1124 Dehalococcoides mccartyi CBDB1 protein export protein YP_308135.1 912728 R 255470 CDS YP_308136.1 73748897 3622881 914300..915385 1 NC_007356.1 nucleotidyl transferase 915385 3622881 cbdb_A1125 Dehalococcoides mccartyi CBDB1 nucleotidyl transferase YP_308136.1 914300 D 255470 CDS YP_308137.1 73748898 3623258 915410..917368 1 NC_007356.1 acetyl-CoA synthetase 917368 acs 3623258 acs Dehalococcoides mccartyi CBDB1 acetyl-CoA synthetase YP_308137.1 915410 D 255470 CDS YP_308138.1 73748899 3623728 917487..918554 1 NC_007356.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 918554 prfA 3623728 prfA Dehalococcoides mccartyi CBDB1 peptide chain release factor 1 YP_308138.1 917487 D 255470 CDS YP_308139.1 73748900 3622882 918554..919387 1 NC_007356.1 SAM-dependent methyltransferase HemK family protein 919387 3622882 cbdb_A1128 Dehalococcoides mccartyi CBDB1 SAM-dependent methyltransferase HemK family protein YP_308139.1 918554 D 255470 CDS YP_308140.1 73748901 3622846 complement(919473..921533) 1 NC_007356.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 921533 fusA 3622846 fusA Dehalococcoides mccartyi CBDB1 elongation factor G YP_308140.1 919473 R 255470 CDS YP_308141.1 73748902 3622884 complement(921604..922161) 1 NC_007356.1 hypothetical protein 922161 3622884 cbdb_A1131 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308141.1 921604 R 255470 CDS YP_308142.1 73748903 3622885 complement(922278..922544) 1 NC_007356.1 hypothetical protein 922544 3622885 cbdb_A1132 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308142.1 922278 R 255470 CDS YP_308143.1 73748904 3623979 complement(922578..923486) 1 NC_007356.1 tyrosine recombinase XerD 923486 xerD 3623979 xerD Dehalococcoides mccartyi CBDB1 tyrosine recombinase XerD YP_308143.1 922578 R 255470 CDS YP_308144.1 73748905 3623826 923652..925475 1 NC_007356.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 925475 uvrC 3623826 uvrC Dehalococcoides mccartyi CBDB1 excinuclease ABC subunit C YP_308144.1 923652 D 255470 CDS YP_308145.1 73748906 3622886 925553..926044 1 NC_007356.1 acetyltransferase 926044 3622886 cbdb_A1135 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_308145.1 925553 D 255470 CDS YP_308146.1 73748907 3623343 complement(926056..926871) 1 NC_007356.1 HAD family hydrolase 926871 3623343 cbdb_A1136 Dehalococcoides mccartyi CBDB1 HAD family hydrolase YP_308146.1 926056 R 255470 CDS YP_308147.1 73748908 3623763 927033..929609 1 NC_007356.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 929609 mutS 3623763 mutS Dehalococcoides mccartyi CBDB1 DNA mismatch repair protein MutS YP_308147.1 927033 D 255470 CDS YP_308148.1 73748909 3623299 complement(929606..929824) 1 NC_007356.1 hypothetical protein 929824 3623299 cbdb_A1138 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308148.1 929606 R 255470 CDS YP_308149.1 73748910 3623301 930071..930433 1 NC_007356.1 hypothetical protein 930433 3623301 cbdb_A1139 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308149.1 930071 D 255470 CDS YP_308150.1 73748911 3624108 complement(930493..931254) 1 NC_007356.1 fumarylacetoacetate hydrolase 931254 3624108 cbdb_A1140 Dehalococcoides mccartyi CBDB1 fumarylacetoacetate hydrolase YP_308150.1 930493 R 255470 CDS YP_308151.1 73748912 3623659 931418..931963 1 NC_007356.1 cob(I)alamin adenosyltransferase 931963 cobA 3623659 cobA Dehalococcoides mccartyi CBDB1 cob(I)alamin adenosyltransferase YP_308151.1 931418 D 255470 CDS YP_308152.1 73748913 3623617 931984..933081 1 NC_007356.1 hypothetical protein 933081 3623617 cbdb_A1142 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308152.1 931984 D 255470 CDS YP_308153.1 73748914 3623618 933085..933684 1 NC_007356.1 non-canonical purine NTP pyrophosphatase, RdgB 933684 3623618 cbdb_A1143 Dehalococcoides mccartyi CBDB1 non-canonical purine NTP pyrophosphatase, RdgB YP_308153.1 933085 D 255470 CDS YP_308154.1 73748915 3623183 933858..934994 1 NC_007356.1 DNA polymerase III subunit beta 934994 dnaN 3623183 dnaN Dehalococcoides mccartyi CBDB1 DNA polymerase III subunit beta YP_308154.1 933858 D 255470 CDS YP_308155.1 73748916 3623619 complement(934969..935151) 1 NC_007356.1 hypothetical protein 935151 3623619 cbdb_A1146 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308155.1 934969 R 255470 CDS YP_308156.1 73748917 3623620 935852..936268 1 NC_007356.1 hypothetical protein 936268 3623620 cbdb_A1147 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308156.1 935852 D 255470 CDS YP_308157.1 73748918 3623621 complement(936543..936671) 1 NC_007356.1 hypothetical protein 936671 3623621 cbdb_A1148 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308157.1 936543 R 255470 CDS YP_308158.1 73748919 3623622 complement(937074..937934) 1 NC_007356.1 hypothetical protein 937934 3623622 cbdb_A1149 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308158.1 937074 R 255470 CDS YP_308159.1 73748920 3623623 938041..939003 1 NC_007356.1 hypothetical protein 939003 3623623 cbdb_A1150 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308159.1 938041 D 255470 CDS YP_308160.1 73748921 3623624 939137..939499 1 NC_007356.1 hypothetical protein 939499 3623624 cbdb_A1151 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308160.1 939137 D 255470 CDS YP_308161.1 73748922 3623625 939474..940442 1 NC_007356.1 hydrolase 940442 3623625 cbdb_A1152 Dehalococcoides mccartyi CBDB1 hydrolase YP_308161.1 939474 D 255470 CDS YP_308162.1 73748923 3623626 940450..940569 1 NC_007356.1 hypothetical protein 940569 3623626 cbdb_A1154 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308162.1 940450 D 255470 CDS YP_308163.1 73748924 3623344 940576..940830 1 NC_007356.1 hypothetical protein 940830 3623344 cbdb_A1156 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308163.1 940576 D 255470 CDS YP_308164.1 73748925 3623671 940996..941850 1 NC_007356.1 formyltetrahydrofolate deformylase 941850 purU 3623671 purU Dehalococcoides mccartyi CBDB1 formyltetrahydrofolate deformylase YP_308164.1 940996 D 255470 CDS YP_308165.1 73748926 3623725 942096..942722 1 NC_007356.1 peptidyl-prolyl isomerase 942722 ppiB 3623725 ppiB Dehalococcoides mccartyi CBDB1 peptidyl-prolyl isomerase YP_308165.1 942096 D 255470 CDS YP_308166.1 73748927 3623346 942978..944042 1 NC_007356.1 arsenical-resistance protein 944042 3623346 cbdb_A1160 Dehalococcoides mccartyi CBDB1 arsenical-resistance protein YP_308166.1 942978 D 255470 CDS YP_308167.1 73748928 3623758 complement(944074..944598) 1 NC_007356.1 peptide methionine sulfoxide reductase 944598 msrA 3623758 msrA Dehalococcoides mccartyi CBDB1 peptide methionine sulfoxide reductase YP_308167.1 944074 R 255470 CDS YP_308168.1 73748929 3623759 complement(944595..944969) 1 NC_007356.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; a fusion protein of this enzyme with MsrA and thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase B 944969 msrB 3623759 msrB Dehalococcoides mccartyi CBDB1 methionine sulfoxide reductase B YP_308168.1 944595 R 255470 CDS YP_308169.1 73748930 3623347 complement(945104..945676) 1 NC_007356.1 iron-sulfur flavoprotein 945676 3623347 cbdb_A1164 Dehalococcoides mccartyi CBDB1 iron-sulfur flavoprotein YP_308169.1 945104 R 255470 CDS YP_308170.1 73748931 3623348 complement(945895..946230) 1 NC_007356.1 TfoX domain-containing protein 946230 3623348 cbdb_A1165 Dehalococcoides mccartyi CBDB1 TfoX domain-containing protein YP_308170.1 945895 R 255470 CDS YP_308171.1 73748932 3623349 complement(946252..946719) 1 NC_007356.1 hypothetical protein 946719 3623349 cbdb_A1167 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308171.1 946252 R 255470 CDS YP_308172.1 73748933 3623350 947004..947303 1 NC_007356.1 ArsR family transcriptional regulator 947303 3623350 cbdb_A1168 Dehalococcoides mccartyi CBDB1 ArsR family transcriptional regulator YP_308172.1 947004 D 255470 CDS YP_308173.1 73748934 3623593 947303..947968 1 NC_007356.1 hypothetical protein 947968 3623593 cbdb_A1169 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308173.1 947303 D 255470 CDS YP_308174.1 73748935 3624109 948111..948305 1 NC_007356.1 hypothetical protein 948305 3624109 cbdb_A1171 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308174.1 948111 D 255470 CDS YP_308175.1 73748936 3624110 complement(948318..948878) 1 NC_007356.1 NADPH-dependent FMN reductase 948878 3624110 cbdb_A1172 Dehalococcoides mccartyi CBDB1 NADPH-dependent FMN reductase YP_308175.1 948318 R 255470 CDS YP_308176.1 73748937 3624111 948980..949228 1 NC_007356.1 hypothetical protein 949228 3624111 cbdb_A1174 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308176.1 948980 D 255470 CDS YP_308177.1 73748938 3624112 949385..949585 1 NC_007356.1 hypothetical protein 949585 3624112 cbdb_A1176 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308177.1 949385 D 255470 CDS YP_308178.1 73748939 3623971 949810..950886 1 NC_007356.1 twitching mobility protein 950886 pilT 3623971 pilT Dehalococcoides mccartyi CBDB1 twitching mobility protein YP_308178.1 949810 D 255470 CDS YP_308179.1 73748940 3623274 950977..952194 1 NC_007356.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 952194 argJ 3623274 argJ Dehalococcoides mccartyi CBDB1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_308179.1 950977 D 255470 CDS YP_308180.1 73748941 3623268 952201..953019 1 NC_007356.1 acetylglutamate kinase 953019 argB 3623268 argB Dehalococcoides mccartyi CBDB1 acetylglutamate kinase YP_308180.1 952201 D 255470 CDS YP_308181.1 73748942 3623270 953092..954288 1 NC_007356.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 954288 argD 3623270 argD Dehalococcoides mccartyi CBDB1 acetylornithine aminotransferase YP_308181.1 953092 D 255470 CDS YP_308182.1 73748943 3624114 954295..955185 1 NC_007356.1 hypothetical protein 955185 3624114 cbdb_A1182 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308182.1 954295 D 255470 CDS YP_308183.1 73748944 3623272 955248..956468 1 NC_007356.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 956468 argG 3623272 argG Dehalococcoides mccartyi CBDB1 argininosuccinate synthase YP_308183.1 955248 D 255470 CDS YP_308184.1 73748945 3623273 956469..957854 1 NC_007356.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 957854 argH 3623273 argH Dehalococcoides mccartyi CBDB1 argininosuccinate lyase YP_308184.1 956469 D 255470 CDS YP_308185.1 73748946 3623371 complement(957864..958052) 1 NC_007356.1 required for 70S ribosome assembly; 50S ribosomal protein L28 958052 rpmB 3623371 rpmB Dehalococcoides mccartyi CBDB1 50S ribosomal protein L28 YP_308185.1 957864 R 255470 CDS YP_308186.1 73748947 3624115 958181..959815 1 NC_007356.1 DAK2 domain-containing protein 959815 3624115 cbdb_A1187 Dehalococcoides mccartyi CBDB1 DAK2 domain-containing protein YP_308186.1 958181 D 255470 CDS YP_308187.1 73748948 3624116 959825..960664 1 NC_007356.1 degV family protein 960664 3624116 cbdb_A1190 Dehalococcoides mccartyi CBDB1 degV family protein YP_308187.1 959825 D 255470 CDS YP_308188.1 73748949 3624117 960681..961523 1 NC_007356.1 degV family protein 961523 3624117 cbdb_A1191 Dehalococcoides mccartyi CBDB1 degV family protein YP_308188.1 960681 D 255470 CDS YP_308189.1 73748950 3624118 961560..962393 1 NC_007356.1 degV family protein 962393 3624118 cbdb_A1192 Dehalococcoides mccartyi CBDB1 degV family protein YP_308189.1 961560 D 255470 CDS YP_308190.1 73748951 3624119 962423..963355 1 NC_007356.1 degV family protein 963355 3624119 cbdb_A1193 Dehalococcoides mccartyi CBDB1 degV family protein YP_308190.1 962423 D 255470 CDS YP_308191.1 73748952 3623404 963716..965938 1 NC_007356.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 965938 recG 3623404 recG Dehalococcoides mccartyi CBDB1 ATP-dependent DNA helicase RecG YP_308191.1 963716 D 255470 CDS YP_308192.1 73748953 3624120 965953..967227 1 NC_007356.1 deoxyguanosinetriphosphate triphosphohydrolase 967227 3624120 cbdb_A1195 Dehalococcoides mccartyi CBDB1 deoxyguanosinetriphosphate triphosphohydrolase YP_308192.1 965953 D 255470 CDS YP_308193.1 73748954 3623275 967305..968975 1 NC_007356.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 968975 argS 3623275 argS Dehalococcoides mccartyi CBDB1 arginyl-tRNA synthetase YP_308193.1 967305 D 255470 CDS YP_308194.1 73748955 3624121 complement(969068..969298) 1 NC_007356.1 hypothetical protein 969298 3624121 cbdb_A1198 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308194.1 969068 R 255470 CDS YP_308195.1 73748956 3623286 969459..970298 1 NC_007356.1 enoyl-ACP reductase 970298 fabI 3623286 fabI Dehalococcoides mccartyi CBDB1 enoyl-ACP reductase YP_308195.1 969459 D 255470 CDS YP_308196.1 73748957 3624123 970329..970532 1 NC_007356.1 hypothetical protein 970532 3624123 cbdb_A1201 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308196.1 970329 D 255470 CDS YP_308197.1 73748958 3624124 970608..971051 1 NC_007356.1 hypothetical protein 971051 3624124 cbdb_A1202 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308197.1 970608 D 255470 CDS YP_308198.1 73748959 3623375 971056..971274 1 NC_007356.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 971274 rpmF 3623375 rpmF Dehalococcoides mccartyi CBDB1 50S ribosomal protein L32 YP_308198.1 971056 D 255470 CDS YP_308199.1 73748960 3623283 971300..972232 1 NC_007356.1 malonyl CoA-ACP transacylase 972232 fabD 3623283 fabD Dehalococcoides mccartyi CBDB1 malonyl CoA-ACP transacylase YP_308199.1 971300 D 255470 CDS YP_308200.1 73748961 3623285 972241..972984 1 NC_007356.1 3-oxoacyl-ACP reductase 972984 fabG 3623285 fabG Dehalococcoides mccartyi CBDB1 3-oxoacyl-ACP reductase YP_308200.1 972241 D 255470 CDS YP_308201.1 73748962 3623694 972996..973427 1 NC_007356.1 N utilization substance protein B 973427 nusB 3623694 nusB Dehalococcoides mccartyi CBDB1 N utilization substance protein B YP_308201.1 972996 D 255470 CDS YP_308202.1 73748963 3623092 973432..973692 1 NC_007356.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 973692 acpP 3623092 acpP Dehalococcoides mccartyi CBDB1 acyl carrier protein YP_308202.1 973432 D 255470 CDS YP_308203.1 73748964 3624126 complement(973958..975469) 1 NC_007356.1 radical SAM domain-containing protein 975469 3624126 cbdb_A1210 Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_308203.1 973958 R 255470 CDS YP_308204.1 73748965 3623751 complement(975541..978987) 1 NC_007356.1 transcription-repair coupling factor 978987 mfd 3623751 mfd Dehalococcoides mccartyi CBDB1 transcription-repair coupling factor YP_308204.1 975541 R 255470 CDS YP_308205.1 73748966 3623732 979137..980258 1 NC_007356.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 980258 proB 3623732 proB Dehalococcoides mccartyi CBDB1 gamma-glutamyl kinase YP_308205.1 979137 D 255470 CDS YP_308206.1 73748967 3624127 980271..980537 1 NC_007356.1 hypothetical protein 980537 3624127 cbdb_A1213 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308206.1 980271 D 255470 CDS YP_308207.1 73748968 3624128 980534..980860 1 NC_007356.1 hypothetical protein 980860 3624128 cbdb_A1215 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308207.1 980534 D 255470 CDS YP_308208.1 73748969 3624129 complement(980900..982084) 1 NC_007356.1 serine protease DegP 982084 3624129 cbdb_A1217 Dehalococcoides mccartyi CBDB1 serine protease DegP YP_308208.1 980900 R 255470 CDS YP_308209.1 73748970 3624131 complement(982174..983016) 1 NC_007356.1 serine protease DegP 983016 3624131 cbdb_A1220 Dehalococcoides mccartyi CBDB1 serine protease DegP YP_308209.1 982174 R 255470 CDS YP_308210.1 73748971 3624132 complement(983208..983960) 1 NC_007356.1 MerR family transcriptional regulator 983960 3624132 cbdb_A1223 Dehalococcoides mccartyi CBDB1 MerR family transcriptional regulator YP_308210.1 983208 R 255470 CDS YP_308211.1 73748972 3623731 984082..985356 1 NC_007356.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 985356 proA 3623731 proA Dehalococcoides mccartyi CBDB1 gamma-glutamyl phosphate reductase YP_308211.1 984082 D 255470 CDS YP_308212.1 73748973 3623385 complement(985438..986163) 1 NC_007356.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 986163 rph 3623385 rph Dehalococcoides mccartyi CBDB1 ribonuclease PH YP_308212.1 985438 R 255470 CDS YP_308213.1 73748974 3624133 complement(986244..986654) 1 NC_007356.1 NUDIX domain-containing protein 986654 3624133 cbdb_A1227 Dehalococcoides mccartyi CBDB1 NUDIX domain-containing protein YP_308213.1 986244 R 255470 CDS YP_308214.1 73748975 3624134 complement(986647..987156) 1 NC_007356.1 competence-damage inducible protein CinA 987156 3624134 cbdb_A1229 Dehalococcoides mccartyi CBDB1 competence-damage inducible protein CinA YP_308214.1 986647 R 255470 CDS YP_308215.1 73748976 3623352 987186..987479 1 NC_007356.1 hypothetical protein 987479 3623352 cbdb_A1230 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308215.1 987186 D 255470 CDS YP_308216.1 73748977 3624010 complement(987427..988611) 1 NC_007356.1 sensor histidine kinase 988611 3624010 cbdb_A1232 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308216.1 987427 R 255470 CDS YP_308217.1 73748978 3624011 complement(988611..989339) 1 NC_007356.1 hypothetical protein 989339 3624011 cbdb_A1233 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308217.1 988611 R 255470 CDS YP_308218.1 73748979 3624012 complement(989488..990030) 1 NC_007356.1 DNA-binding response regulator 990030 3624012 cbdb_A1234 Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308218.1 989488 R 255470 CDS YP_308219.1 73748980 3624013 990406..991515 1 NC_007356.1 hypothetical protein 991515 3624013 cbdb_A1235 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308219.1 990406 D 255470 CDS YP_308220.1 73748981 3622966 complement(991611..991931) 1 NC_007356.1 hypothetical protein 991931 3622966 cbdb_B26 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308220.1 991611 R 255470 CDS YP_308221.1 73748982 3623821 992294..994123 1 NC_007356.1 GTP-binding protein TypA 994123 typA 3623821 typA Dehalococcoides mccartyi CBDB1 GTP-binding protein TypA YP_308221.1 992294 D 255470 CDS YP_308222.1 73748983 3624014 complement(994341..995747) 1 NC_007356.1 major facilitator family transporter 995747 3624014 cbdb_A1238 Dehalococcoides mccartyi CBDB1 major facilitator family transporter YP_308222.1 994341 R 255470 CDS YP_308223.1 73748984 3624015 complement(995815..996141) 1 NC_007356.1 universal stress protein 996141 3624015 cbdb_A1239 Dehalococcoides mccartyi CBDB1 universal stress protein YP_308223.1 995815 R 255470 CDS YP_308224.1 73748985 3624017 complement(996763..997410) 1 NC_007356.1 hypothetical protein 997410 3624017 cbdb_A1240 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308224.1 996763 R 255470 CDS YP_308225.1 73748986 3624018 complement(997571..997975) 1 NC_007356.1 fasciclin domain-containing protein 997975 3624018 cbdb_A1241 Dehalococcoides mccartyi CBDB1 fasciclin domain-containing protein YP_308225.1 997571 R 255470 CDS YP_308226.1 73748987 3624019 998206..998769 1 NC_007356.1 hypothetical protein 998769 3624019 cbdb_A1244 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308226.1 998206 D 255470 CDS YP_308227.1 73748988 3624020 complement(998835..999182) 1 NC_007356.1 hypothetical protein 999182 3624020 cbdb_A1245 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308227.1 998835 R 255470 CDS YP_308228.1 73748989 3624021 999378..999566 1 NC_007356.1 hypothetical protein 999566 3624021 cbdb_A1246 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308228.1 999378 D 255470 CDS YP_308229.1 73748990 3624022 999888..1000076 1 NC_007356.1 hypothetical protein 1000076 3624022 cbdb_A1247 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308229.1 999888 D 255470 CDS YP_308230.1 73748991 3624023 complement(1000170..1000997) 1 NC_007356.1 hydrolase 1000997 3624023 cbdb_A1248 Dehalococcoides mccartyi CBDB1 hydrolase YP_308230.1 1000170 R 255470 CDS YP_308231.1 73748992 3624043 complement(1000987..1002360) 1 NC_007356.1 recombination factor protein RarA 1002360 3624043 cbdb_A1249 Dehalococcoides mccartyi CBDB1 recombination factor protein RarA YP_308231.1 1000987 R 255470 CDS YP_308232.1 73748993 3624044 complement(1002332..1002880) 1 NC_007356.1 hypothetical protein 1002880 3624044 cbdb_A1251 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308232.1 1002332 R 255470 CDS YP_308233.1 73748994 3624045 complement(1002894..1003169) 1 NC_007356.1 hypothetical protein 1003169 3624045 cbdb_A1252 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308233.1 1002894 R 255470 CDS YP_308234.1 73748995 3624046 complement(1003290..1004447) 1 NC_007356.1 hypothetical protein 1004447 3624046 cbdb_A1253 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308234.1 1003290 R 255470 CDS YP_308235.1 73748996 3624047 complement(1004606..1005643) 1 NC_007356.1 radical SAM domain-containing protein 1005643 3624047 cbdb_A1254 Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_308235.1 1004606 R 255470 CDS YP_308236.1 73748997 3624048 complement(1005717..1006625) 1 NC_007356.1 hypothetical protein 1006625 3624048 cbdb_A1255 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308236.1 1005717 R 255470 CDS YP_308237.1 73748998 3622967 1006985..1007209 1 NC_007356.1 hypothetical protein 1007209 3622967 cbdb_B27 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308237.1 1006985 D 255470 CDS YP_308238.1 73748999 3624049 complement(1007301..1007792) 1 NC_007356.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1007792 3624049 cbdb_A1256 Dehalococcoides mccartyi CBDB1 nucleotide-binding protein YP_308238.1 1007301 R 255470 CDS YP_308239.1 73749000 3624050 1007952..1008407 1 NC_007356.1 hypothetical protein 1008407 3624050 cbdb_A1257 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308239.1 1007952 D 255470 CDS YP_308240.1 73749001 3624051 1008437..1009006 1 NC_007356.1 hypothetical protein 1009006 3624051 cbdb_A1259 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308240.1 1008437 D 255470 CDS YP_308241.1 73749002 3624053 complement(1009459..1010190) 1 NC_007356.1 hypothetical protein 1010190 3624053 cbdb_A1260 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308241.1 1009459 R 255470 CDS YP_308242.1 73749003 3624054 1010337..1010885 1 NC_007356.1 iron-sulfur flavoprotein 1010885 3624054 cbdb_A1263 Dehalococcoides mccartyi CBDB1 iron-sulfur flavoprotein YP_308242.1 1010337 D 255470 CDS YP_308243.1 73749004 3624055 complement(1010876..1011679) 1 NC_007356.1 acetyltransferase 1011679 3624055 cbdb_A1264 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_308243.1 1010876 R 255470 CDS YP_308244.1 73749005 3624056 complement(1011803..1011946) 1 NC_007356.1 hypothetical protein 1011946 3624056 cbdb_A1265 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308244.1 1011803 R 255470 CDS YP_308245.1 73749006 3624057 complement(1011968..1012189) 1 NC_007356.1 hypothetical protein 1012189 3624057 cbdb_A1266 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308245.1 1011968 R 255470 CDS YP_308246.1 73749007 3623657 1012441..1013037 1 NC_007356.1 dephospho-CoA kinase 1013037 coaE 3623657 coaE Dehalococcoides mccartyi CBDB1 dephospho-CoA kinase YP_308246.1 1012441 D 255470 CDS YP_308247.1 73749008 3624058 complement(1013012..1013920) 1 NC_007356.1 hypothetical protein 1013920 3624058 cbdb_A1269 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308247.1 1013012 R 255470 CDS YP_308248.1 73749009 3623366 1014151..1014549 1 NC_007356.1 50S ribosomal protein L21 1014549 rplU 3623366 rplU Dehalococcoides mccartyi CBDB1 50S ribosomal protein L21 YP_308248.1 1014151 D 255470 CDS YP_308249.1 73749010 3623370 1014539..1014793 1 NC_007356.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1014793 rpmA 3623370 rpmA Dehalococcoides mccartyi CBDB1 50S ribosomal protein L27 YP_308249.1 1014539 D 255470 CDS YP_308250.1 73749011 3623374 1014800..1015006 1 NC_007356.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1015006 rpmE 3623374 rpmE Dehalococcoides mccartyi CBDB1 50S ribosomal protein L31 YP_308250.1 1014800 D 255470 CDS YP_308251.1 73749012 3623309 1015086..1016009 1 NC_007356.1 hypothetical protein 1016009 3623309 cbdb_A1275 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308251.1 1015086 D 255470 CDS YP_308252.1 73749013 3623899 complement(1016002..1016316) 1 NC_007356.1 phosphoribosyl-AMP cyclohydrolase 1016316 hisI 3623899 hisI Dehalococcoides mccartyi CBDB1 phosphoribosyl-AMP cyclohydrolase YP_308252.1 1016002 R 255470 CDS YP_308253.1 73749014 3623612 1016447..1016905 1 NC_007356.1 acetyltransferase 1016905 3623612 cbdb_A1277 Dehalococcoides mccartyi CBDB1 acetyltransferase YP_308253.1 1016447 D 255470 CDS YP_308254.1 73749015 3623616 complement(1016912..1017646) 1 NC_007356.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1017646 hisA 3623616 hisA Dehalococcoides mccartyi CBDB1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_308254.1 1016912 R 255470 CDS YP_308255.1 73749016 3623329 complement(1017652..1017894) 1 NC_007356.1 hypothetical protein 1017894 3623329 cbdb_A1279 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308255.1 1017652 R 255470 CDS YP_308256.1 73749017 3623330 complement(1017974..1018354) 1 NC_007356.1 hypothetical protein 1018354 3623330 cbdb_A1281 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308256.1 1017974 R 255470 CDS YP_308257.1 73749018 3622851 1018463..1018750 1 NC_007356.1 glutamyl-tRNA(Gln) amidotransferase subunit C 1018750 gatC 3622851 gatC Dehalococcoides mccartyi CBDB1 glutamyl-tRNA(Gln) amidotransferase subunit C YP_308257.1 1018463 D 255470 CDS YP_308258.1 73749019 3622849 1018750..1020210 1 NC_007356.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1020210 gatA 3622849 gatA Dehalococcoides mccartyi CBDB1 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_308258.1 1018750 D 255470 CDS YP_308259.1 73749020 3623331 1020227..1020691 1 NC_007356.1 hypothetical protein 1020691 3623331 cbdb_A1285 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308259.1 1020227 D 255470 CDS YP_308260.1 73749021 3623332 1020815..1021189 1 NC_007356.1 hypothetical protein 1021189 3623332 cbdb_A1287 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308260.1 1020815 D 255470 CDS YP_308261.1 73749022 3623905 1021195..1021404 1 NC_007356.1 DNA-binding protein 1021404 3623905 cbdb_A1288 Dehalococcoides mccartyi CBDB1 DNA-binding protein YP_308261.1 1021195 D 255470 CDS YP_308262.1 73749023 3622978 1021401..1022321 1 NC_007356.1 ABC transporter ATP-binding protein 1022321 3622978 cbdb_A1289 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_308262.1 1021401 D 255470 CDS YP_308263.1 73749024 3622979 1022321..1023016 1 NC_007356.1 ABC transporter permease 1023016 3622979 cbdb_A1290 Dehalococcoides mccartyi CBDB1 ABC transporter permease YP_308263.1 1022321 D 255470 CDS YP_308264.1 73749025 3622980 1023154..1023636 1 NC_007356.1 AsnC family transcriptional regulator 1023636 3622980 cbdb_A1291 Dehalococcoides mccartyi CBDB1 AsnC family transcriptional regulator YP_308264.1 1023154 D 255470 CDS YP_308265.1 73749026 3622652 1023659..1024855 1 NC_007356.1 aspartate aminotransferase 1024855 aspC 3622652 aspC Dehalococcoides mccartyi CBDB1 aspartate aminotransferase YP_308265.1 1023659 D 255470 CDS YP_308266.1 73749027 3623814 complement(1024935..1025906) 1 NC_007356.1 tryptophanyl-tRNA synthetase 1025906 trpS 3623814 trpS Dehalococcoides mccartyi CBDB1 tryptophanyl-tRNA synthetase YP_308266.1 1024935 R 255470 CDS YP_308267.1 73749028 3623994 complement(1025961..1026815) 1 NC_007356.1 hydroxymethylbutenyl pyrophosphate reductase 1026815 ispH 3623994 ispH Dehalococcoides mccartyi CBDB1 hydroxymethylbutenyl pyrophosphate reductase YP_308267.1 1025961 R 255470 CDS YP_308268.1 73749029 3622981 1026901..1027911 1 NC_007356.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase 1027911 3622981 cbdb_A1295 Dehalococcoides mccartyi CBDB1 tagatose 1,6-diphosphate aldolase YP_308268.1 1026901 D 255470 CDS YP_308269.1 73749030 3622982 1027908..1028840 1 NC_007356.1 carbohydrate kinase 1028840 3622982 cbdb_A1296 Dehalococcoides mccartyi CBDB1 carbohydrate kinase YP_308269.1 1027908 D 255470 CDS YP_308270.1 73749031 3622983 complement(1028844..1029701) 1 NC_007356.1 hypothetical protein 1029701 3622983 cbdb_A1297 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308270.1 1028844 R 255470 CDS YP_308271.1 73749032 3622984 complement(1029707..1030246) 1 NC_007356.1 ECF subfamily RNA polymerase sigma factor 1030246 3622984 cbdb_A1298 Dehalococcoides mccartyi CBDB1 ECF subfamily RNA polymerase sigma factor YP_308271.1 1029707 R 255470 CDS YP_308272.1 73749033 3622985 complement(1030296..1030457) 1 NC_007356.1 hypothetical protein 1030457 3622985 cbdb_A1299 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308272.1 1030296 R 255470 CDS YP_308273.1 73749034 3622987 1030613..1030837 1 NC_007356.1 excisionase 1030837 3622987 cbdb_A1300 Dehalococcoides mccartyi CBDB1 excisionase YP_308273.1 1030613 D 255470 CDS YP_308274.1 73749035 3622988 1030853..1031530 1 NC_007356.1 LuxR family transcriptional regulator 1031530 3622988 cbdb_A1301 Dehalococcoides mccartyi CBDB1 LuxR family transcriptional regulator YP_308274.1 1030853 D 255470 CDS YP_308275.1 73749036 3622764 1031635..1033971 1 NC_007356.1 type II secretion system protein GspE 1033971 gspE 3622764 gspE Dehalococcoides mccartyi CBDB1 type II secretion system protein GspE YP_308275.1 1031635 D 255470 CDS YP_308276.1 73749037 3623970 1033981..1035186 1 NC_007356.1 pilin biogenesis protein 1035186 pilC 3623970 pilC Dehalococcoides mccartyi CBDB1 pilin biogenesis protein YP_308276.1 1033981 D 255470 CDS YP_308277.1 73749038 3622989 1035199..1035654 1 NC_007356.1 type II secretion system protein, GspI 1035654 3622989 cbdb_A1304 Dehalococcoides mccartyi CBDB1 type II secretion system protein, GspI YP_308277.1 1035199 D 255470 CDS YP_308278.1 73749039 3622990 1035651..1036205 1 NC_007356.1 type II secretion system protein 1036205 3622990 cbdb_A1305 Dehalococcoides mccartyi CBDB1 type II secretion system protein YP_308278.1 1035651 D 255470 CDS YP_308279.1 73749040 3622991 1036236..1037363 1 NC_007356.1 hypothetical protein 1037363 3622991 cbdb_A1306 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308279.1 1036236 D 255470 CDS YP_308280.1 73749041 3622992 1037478..1039085 1 NC_007356.1 hypothetical protein 1039085 3622992 cbdb_A1307 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308280.1 1037478 D 255470 CDS YP_308281.1 73749042 3623013 1039095..1039670 1 NC_007356.1 hypothetical protein 1039670 3623013 cbdb_A1308 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308281.1 1039095 D 255470 CDS YP_308282.1 73749043 3623014 1039676..1041160 1 NC_007356.1 type IV pilus assembly family protein 1041160 3623014 cbdb_A1309 Dehalococcoides mccartyi CBDB1 type IV pilus assembly family protein YP_308282.1 1039676 D 255470 CDS YP_308283.1 73749044 3623972 1041172..1042287 1 NC_007356.1 twitching mobility protein 1042287 pilT 3623972 pilT Dehalococcoides mccartyi CBDB1 twitching mobility protein YP_308283.1 1041172 D 255470 CDS YP_308284.1 73749045 3623016 complement(1042426..1042785) 1 NC_007356.1 general secretion family protein 1042785 3623016 cbdb_A1311 Dehalococcoides mccartyi CBDB1 general secretion family protein YP_308284.1 1042426 R 255470 CDS YP_308285.1 73749046 3623017 1043010..1043777 1 NC_007356.1 type IV prepilin leader peptidase 1043777 3623017 cbdb_A1313 Dehalococcoides mccartyi CBDB1 type IV prepilin leader peptidase YP_308285.1 1043010 D 255470 CDS YP_308286.1 73749047 3623018 1043902..1045986 1 NC_007356.1 catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; functions in mannosylglycerate biosynthesis; bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase 1045986 3623018 cbdb_A1314 Dehalococcoides mccartyi CBDB1 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase YP_308286.1 1043902 D 255470 CDS YP_308287.1 73749048 3623019 1046172..1046672 1 NC_007356.1 hypothetical protein 1046672 3623019 cbdb_A1315 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308287.1 1046172 D 255470 CDS YP_308288.1 73749049 3623605 1046733..1048196 1 NC_007356.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1048196 gltX 3623605 gltX Dehalococcoides mccartyi CBDB1 glutamyl-tRNA synthetase YP_308288.1 1046733 D 255470 CDS YP_308289.1 73749050 3623020 1048371..1048970 1 NC_007356.1 hypothetical protein 1048970 3623020 cbdb_A1317 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308289.1 1048371 D 255470 CDS YP_308290.1 73749051 3623021 1049070..1049327 1 NC_007356.1 hypothetical protein 1049327 3623021 cbdb_A1318 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308290.1 1049070 D 255470 CDS YP_308291.1 73749052 3623022 1049329..1050333 1 NC_007356.1 radical SAM domain-containing protein 1050333 3623022 cbdb_A1319 Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_308291.1 1049329 D 255470 CDS YP_308292.1 73749053 3623023 complement(1050352..1050501) 1 NC_007356.1 hypothetical protein 1050501 3623023 cbdb_A1320 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308292.1 1050352 R 255470 CDS YP_308293.1 73749054 3623024 1050621..1051121 1 NC_007356.1 hypothetical protein 1051121 3623024 cbdb_A1322 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308293.1 1050621 D 255470 CDS YP_308294.1 73749055 3623025 1051118..1051690 1 NC_007356.1 NADPH-dependent FMN reductase 1051690 3623025 cbdb_A1323 Dehalococcoides mccartyi CBDB1 NADPH-dependent FMN reductase YP_308294.1 1051118 D 255470 CDS YP_308295.1 73749056 3623674 complement(1051692..1052624) 1 NC_007356.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1052624 pyrD 3623674 pyrD Dehalococcoides mccartyi CBDB1 dihydroorotate dehydrogenase 1B YP_308295.1 1051692 R 255470 CDS YP_308296.1 73749057 3623026 1052962..1053333 1 NC_007356.1 dnaK suppressor protein 1053333 3623026 cbdb_A1326 Dehalococcoides mccartyi CBDB1 dnaK suppressor protein YP_308296.1 1052962 D 255470 CDS YP_308297.1 73749058 3624008 1053360..1053842 1 NC_007356.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1053842 lspA 3624008 lspA Dehalococcoides mccartyi CBDB1 lipoprotein signal peptidase YP_308297.1 1053360 D 255470 CDS YP_308298.1 73749059 3623027 1053829..1054731 1 NC_007356.1 ribosomal large subunit pseudouridine synthase D 1054731 3623027 cbdb_A1328 Dehalococcoides mccartyi CBDB1 ribosomal large subunit pseudouridine synthase D YP_308298.1 1053829 D 255470 CDS YP_308299.1 73749060 3623029 1054831..1055112 1 NC_007356.1 hypothetical protein 1055112 3623029 cbdb_A1330 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308299.1 1054831 D 255470 CDS YP_308300.1 73749061 3623030 1055140..1055550 1 NC_007356.1 hypothetical protein 1055550 3623030 cbdb_A1331 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308300.1 1055140 D 255470 CDS YP_308301.1 73749062 3623031 1055691..1056281 1 NC_007356.1 hypothetical protein 1056281 3623031 cbdb_A1332 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308301.1 1055691 D 255470 CDS YP_308302.1 73749063 3623032 1056278..1057909 1 NC_007356.1 auxin-responsive GH3 protein 1057909 3623032 cbdb_A1333 Dehalococcoides mccartyi CBDB1 auxin-responsive GH3 protein YP_308302.1 1056278 D 255470 CDS YP_308303.1 73749064 3622968 complement(1058042..1058221) 1 NC_007356.1 hypothetical protein 1058221 3622968 cbdb_B28 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308303.1 1058042 R 255470 CDS YP_308304.1 73749065 3623033 1058229..1060607 1 NC_007356.1 diguanylate cyclase 1060607 3623033 cbdb_A1335 Dehalococcoides mccartyi CBDB1 diguanylate cyclase YP_308304.1 1058229 D 255470 CDS YP_308305.1 73749066 3623766 complement(1060650..1061510) 1 NC_007356.1 nicotinate-nucleotide pyrophosphorylase 1061510 nadC 3623766 nadC Dehalococcoides mccartyi CBDB1 nicotinate-nucleotide pyrophosphorylase YP_308305.1 1060650 R 255470 CDS YP_308306.1 73749067 3623764 complement(1061512..1063059) 1 NC_007356.1 L-aspartate oxidase 1063059 nabD 3623764 nabD Dehalococcoides mccartyi CBDB1 L-aspartate oxidase YP_308306.1 1061512 R 255470 CDS YP_308307.1 73749068 3623980 complement(1063081..1063359) 1 NC_007356.1 preprotein translocase subunit YajC 1063359 yajC 3623980 yajC Dehalococcoides mccartyi CBDB1 preprotein translocase subunit YajC YP_308307.1 1063081 R 255470 CDS YP_308308.1 73749069 3623754 complement(1063370..1064626) 1 NC_007356.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1064626 miaB 3623754 miaB Dehalococcoides mccartyi CBDB1 (dimethylallyl)adenosine tRNA methylthiotransferase YP_308308.1 1063370 R 255470 CDS YP_308309.1 73749070 3623035 complement(1064723..1065073) 1 NC_007356.1 hypothetical protein 1065073 3623035 cbdb_A1341 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308309.1 1064723 R 255470 CDS YP_308310.1 73749071 3623757 1065323..1065787 1 NC_007356.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 1065787 mscL 3623757 mscL Dehalococcoides mccartyi CBDB1 large-conductance mechanosensitive channel YP_308310.1 1065323 D 255470 CDS YP_308311.1 73749072 3623762 complement(1066005..1066817) 1 NC_007356.1 formamidopyrimidine-DNA glycosylase 1066817 mutM 3623762 mutM Dehalococcoides mccartyi CBDB1 formamidopyrimidine-DNA glycosylase YP_308311.1 1066005 R 255470 CDS YP_308312.1 73749073 3623036 complement(1066810..1067433) 1 NC_007356.1 PAP2 family protein 1067433 3623036 cbdb_A1346 Dehalococcoides mccartyi CBDB1 PAP2 family protein YP_308312.1 1066810 R 255470 CDS YP_308313.1 73749074 3623978 complement(1067442..1070153) 1 NC_007356.1 DNA-directed DNA polymerase I 1070153 polA 3623978 polA Dehalococcoides mccartyi CBDB1 DNA-directed DNA polymerase I YP_308313.1 1067442 R 255470 CDS YP_308314.1 73749075 3623037 complement(1070316..1070762) 1 NC_007356.1 rhodanese-like domain-containing protein 1070762 3623037 cbdb_A1349 Dehalococcoides mccartyi CBDB1 rhodanese-like domain-containing protein YP_308314.1 1070316 R 255470 CDS YP_308315.1 73749076 3623038 complement(1070766..1071344) 1 NC_007356.1 hypothetical protein 1071344 3623038 cbdb_A1350 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308315.1 1070766 R 255470 CDS YP_308316.1 73749077 3623039 complement(1071397..1071600) 1 NC_007356.1 hypothetical protein 1071600 3623039 cbdb_A1351 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308316.1 1071397 R 255470 CDS YP_308317.1 73749078 3623040 1071688..1071807 1 NC_007356.1 hypothetical protein 1071807 3623040 cbdb_A1352 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308317.1 1071688 D 255470 CDS YP_308318.1 73749079 3623271 1071868..1072803 1 NC_007356.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1072803 argF 3623271 argF Dehalococcoides mccartyi CBDB1 ornithine carbamoyltransferase YP_308318.1 1071868 D 255470 CDS YP_308319.1 73749080 3623281 1072824..1074152 1 NC_007356.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1074152 engA 3623281 engA Dehalococcoides mccartyi CBDB1 GTP-binding protein EngA YP_308319.1 1072824 D 255470 CDS YP_308320.1 73749081 3623041 1074146..1074796 1 NC_007356.1 hypothetical protein 1074796 3623041 cbdb_A1355 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308320.1 1074146 D 255470 CDS YP_308321.1 73749082 3623610 1074845..1075924 1 NC_007356.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1075924 gpsA 3623610 gpsA Dehalococcoides mccartyi CBDB1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_308321.1 1074845 D 255470 CDS YP_308322.1 73749083 3623181 complement(1075928..1077007) 1 NC_007356.1 co-chaperone protein DnaJ 1077007 dnaJ 3623181 dnaJ Dehalococcoides mccartyi CBDB1 co-chaperone protein DnaJ YP_308322.1 1075928 R 255470 CDS YP_308323.1 73749084 3623182 complement(1077159..1079069) 1 NC_007356.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1079069 dnaK 3623182 dnaK Dehalococcoides mccartyi CBDB1 molecular chaperone DnaK YP_308323.1 1077159 R 255470 CDS YP_308324.1 73749085 3622763 complement(1079104..1079667) 1 NC_007356.1 co-chaperone protein GrpE 1079667 grpE 3622763 grpE Dehalococcoides mccartyi CBDB1 co-chaperone protein GrpE YP_308324.1 1079104 R 255470 CDS YP_308325.1 73749086 3623043 complement(1079717..1080754) 1 NC_007356.1 heat-inducible transcription repressor HrcA 1080754 3623043 cbdb_A1361 Dehalococcoides mccartyi CBDB1 heat-inducible transcription repressor HrcA YP_308325.1 1079717 R 255470 CDS YP_308326.1 73749087 3623044 1080920..1081552 1 NC_007356.1 hypothetical protein 1081552 3623044 cbdb_A1363 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308326.1 1080920 D 255470 CDS YP_308327.1 73749088 3623045 1081592..1083124 1 NC_007356.1 hypothetical protein 1083124 3623045 cbdb_A1365 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308327.1 1081592 D 255470 CDS YP_308328.1 73749089 3623046 1083169..1083666 1 NC_007356.1 hypothetical protein 1083666 3623046 cbdb_A1366 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308328.1 1083169 D 255470 CDS YP_308329.1 73749090 3622969 complement(1083707..1083844) 1 NC_007356.1 hypothetical protein 1083844 3622969 cbdb_B29 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308329.1 1083707 R 255470 CDS YP_308330.1 73749091 3623047 complement(1084174..1087221) 1 NC_007356.1 hypothetical protein 1087221 3623047 cbdb_A1368 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308330.1 1084174 R 255470 CDS YP_308331.1 73749092 3623412 complement(1087496..1088770) 1 NC_007356.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1088770 rho 3623412 rho Dehalococcoides mccartyi CBDB1 transcription termination factor Rho YP_308331.1 1087496 R 255470 CDS YP_308332.1 73749093 3622859 complement(1088857..1089507) 1 NC_007356.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 1089507 tal 3622859 tal Dehalococcoides mccartyi CBDB1 translaldolase YP_308332.1 1088857 R 255470 CDS YP_308333.1 73749094 3623677 complement(1089546..1091180) 1 NC_007356.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1091180 pyrG 3623677 pyrG Dehalococcoides mccartyi CBDB1 CTP synthetase YP_308333.1 1089546 R 255470 CDS YP_308334.1 73749095 3623049 1091464..1092456 1 NC_007356.1 DnaJ family protein 1092456 3623049 cbdb_A1372 Dehalococcoides mccartyi CBDB1 DnaJ family protein YP_308334.1 1091464 D 255470 CDS YP_308335.1 73749096 3623050 1092469..1092774 1 NC_007356.1 MerR family transcriptional regulator 1092774 3623050 cbdb_A1373 Dehalococcoides mccartyi CBDB1 MerR family transcriptional regulator YP_308335.1 1092469 D 255470 CDS YP_308336.1 73749097 3623652 1092779..1095217 1 NC_007356.1 ATP-dependent Clp protease, ATP-binding subunit ClpC 1095217 clpA 3623652 clpA Dehalococcoides mccartyi CBDB1 ATP-dependent Clp protease, ATP-binding subunit ClpC YP_308336.1 1092779 D 255470 CDS YP_308337.1 73749098 3623051 1095340..1095891 1 NC_007356.1 hypothetical protein 1095891 3623051 cbdb_A1375 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308337.1 1095340 D 255470 CDS YP_308338.1 73749099 3623666 1095977..1097395 1 NC_007356.1 amidophosphoribosyltransferase 1097395 purF 3623666 purF Dehalococcoides mccartyi CBDB1 amidophosphoribosyltransferase YP_308338.1 1095977 D 255470 CDS YP_308339.1 73749100 3623669 1097511..1098533 1 NC_007356.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1098533 purM 3623669 purM Dehalococcoides mccartyi CBDB1 phosphoribosylaminoimidazole synthetase YP_308339.1 1097511 D 255470 CDS YP_308340.1 73749101 3623740 1098530..1099150 1 NC_007356.1 SAM-dependent methyltransferase 1099150 3623740 cbdb_A1379 Dehalococcoides mccartyi CBDB1 SAM-dependent methyltransferase YP_308340.1 1098530 D 255470 CDS YP_308341.1 73749102 3623667 1099179..1100720 1 NC_007356.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1100720 purH 3623667 purH Dehalococcoides mccartyi CBDB1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_308341.1 1099179 D 255470 CDS YP_308342.1 73749103 3623976 1100738..1101739 1 NC_007356.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1101739 pncB 3623976 pncB Dehalococcoides mccartyi CBDB1 nicotinate phosphoribosyltransferase YP_308342.1 1100738 D 255470 CDS YP_308343.1 73749104 3623133 1101923..1102171 1 NC_007356.1 hypothetical protein 1102171 3623133 cbdb_A1383 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308343.1 1101923 D 255470 CDS YP_308344.1 73749105 3623134 1102175..1103011 1 NC_007356.1 in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase 1103011 arsM 3623134 arsM Dehalococcoides mccartyi CBDB1 arsenite S-adenosylmethyltransferase YP_308344.1 1102175 D 255470 CDS YP_308345.1 73749106 3623135 complement(1103008..1104423) 1 NC_007356.1 PP-loop family protein 1104423 3623135 cbdb_A1385 Dehalococcoides mccartyi CBDB1 PP-loop family protein YP_308345.1 1103008 R 255470 CDS YP_308346.1 73749107 3623136 complement(1104481..1105104) 1 NC_007356.1 phosphoglycerate mutase 1105104 3623136 cbdb_A1386 Dehalococcoides mccartyi CBDB1 phosphoglycerate mutase YP_308346.1 1104481 R 255470 CDS YP_308347.1 73749108 3623137 complement(1105107..1106285) 1 NC_007356.1 M48 family peptidase 1106285 3623137 cbdb_A1387 Dehalococcoides mccartyi CBDB1 M48 family peptidase YP_308347.1 1105107 R 255470 CDS YP_308348.1 73749109 3623138 complement(1106285..1106929) 1 NC_007356.1 hypothetical protein 1106929 3623138 cbdb_A1388 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308348.1 1106285 R 255470 CDS YP_308349.1 73749110 3623139 complement(1106910..1108184) 1 NC_007356.1 hemolysin-like protein 1108184 3623139 cbdb_A1389 Dehalococcoides mccartyi CBDB1 hemolysin-like protein YP_308349.1 1106910 R 255470 CDS YP_308350.1 73749111 3623597 1108302..1109282 1 NC_007356.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1109282 gcp 3623597 gcp Dehalococcoides mccartyi CBDB1 DNA-binding/iron metalloprotein/AP endonuclease YP_308350.1 1108302 D 255470 CDS YP_308351.1 73749112 3623551 1109775..1110071 1 NC_007356.1 molecular chaperone GroES 1110071 groES 3623551 groES Dehalococcoides mccartyi CBDB1 molecular chaperone GroES YP_308351.1 1109775 D 255470 CDS YP_308352.1 73749113 3623550 1110099..1111712 1 NC_007356.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 1111712 groEL 3623550 groEL Dehalococcoides mccartyi CBDB1 molecular chaperone GroEL YP_308352.1 1110099 D 255470 CDS YP_308353.1 73749114 3623140 complement(1111800..1113059) 1 NC_007356.1 M16 family peptidase 1113059 3623140 cbdb_A1394 Dehalococcoides mccartyi CBDB1 M16 family peptidase YP_308353.1 1111800 R 255470 CDS YP_308354.1 73749115 3623334 1113172..1113531 1 NC_007356.1 hydrogenase nickel incorporation protein HypA 1113531 hypA 3623334 hypA Dehalococcoides mccartyi CBDB1 hydrogenase nickel incorporation protein HypA YP_308354.1 1113172 D 255470 CDS YP_308355.1 73749116 3624135 1113512..1114165 1 NC_007356.1 hydrogenase nickel incorporation protein HypB 1114165 hypB 3624135 hypB Dehalococcoides mccartyi CBDB1 hydrogenase nickel incorporation protein HypB YP_308355.1 1113512 D 255470 CDS YP_308356.1 73749117 3623542 1114166..1116457 1 NC_007356.1 [NiFe] hydrogenase maturation protein HypF 1116457 hypF 3623542 hypF Dehalococcoides mccartyi CBDB1 [NiFe] hydrogenase maturation protein HypF YP_308356.1 1114166 D 255470 CDS YP_308357.1 73749118 3623539 1116457..1116672 1 NC_007356.1 hydrogenase assembly chaperone HypC 1116672 hypC 3623539 hypC Dehalococcoides mccartyi CBDB1 hydrogenase assembly chaperone HypC YP_308357.1 1116457 D 255470 CDS YP_308358.1 73749119 3623540 1116676..1117770 1 NC_007356.1 hydrogenase expression/formation protein HypD 1117770 hypD 3623540 hypD Dehalococcoides mccartyi CBDB1 hydrogenase expression/formation protein HypD YP_308358.1 1116676 D 255470 CDS YP_308359.1 73749120 3623541 1117763..1118770 1 NC_007356.1 hydrogenase expression/formation protein HypE 1118770 hypE 3623541 hypE Dehalococcoides mccartyi CBDB1 hydrogenase expression/formation protein HypE YP_308359.1 1117763 D 255470 CDS YP_308360.1 73749121 3623141 1118933..1119553 1 NC_007356.1 TetR family transcriptional regulator 1119553 3623141 cbdb_A1404 Dehalococcoides mccartyi CBDB1 TetR family transcriptional regulator YP_308360.1 1118933 D 255470 CDS YP_308361.1 73749122 3623142 1119563..1119886 1 NC_007356.1 hypothetical protein 1119886 3623142 cbdb_A1405 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308361.1 1119563 D 255470 CDS YP_308362.1 73749123 3623143 1120703..1120837 1 NC_007356.1 hypothetical protein 1120837 3623143 cbdb_A1406 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308362.1 1120703 D 255470 CDS YP_308363.1 73749124 3623144 complement(1121452..1121742) 1 NC_007356.1 hypothetical protein 1121742 3623144 cbdb_A1409 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308363.1 1121452 R 255470 CDS YP_308364.1 73749125 3623145 1121726..1121959 1 NC_007356.1 hypothetical protein 1121959 3623145 cbdb_A1410 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308364.1 1121726 D 255470 CDS YP_308365.1 73749126 3623146 complement(1122011..1122424) 1 NC_007356.1 excisionase 1122424 3623146 cbdb_A1412 Dehalococcoides mccartyi CBDB1 excisionase YP_308365.1 1122011 R 255470 CDS YP_308366.1 73749127 3623147 1122428..1122760 1 NC_007356.1 hypothetical protein 1122760 3623147 cbdb_A1413 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308366.1 1122428 D 255470 CDS YP_308367.1 73749128 3623148 complement(1122824..1123435) 1 NC_007356.1 multiple antibiotic resistance protein MarC 1123435 3623148 cbdb_A1414 Dehalococcoides mccartyi CBDB1 multiple antibiotic resistance protein MarC YP_308367.1 1122824 R 255470 CDS YP_308368.1 73749129 3623149 1123550..1123996 1 NC_007356.1 hypothetical protein 1123996 3623149 cbdb_A1416 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308368.1 1123550 D 255470 CDS YP_308369.1 73749130 3622993 complement(1124001..1124978) 1 NC_007356.1 hypothetical protein 1124978 3622993 cbdb_A1417 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308369.1 1124001 R 255470 CDS YP_308370.1 73749131 3622994 1125167..1125568 1 NC_007356.1 hypothetical protein 1125568 3622994 cbdb_A1418 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308370.1 1125167 D 255470 CDS YP_308371.1 73749132 3623165 1125743..1126399 1 NC_007356.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1126399 ctc 3623165 ctc Dehalococcoides mccartyi CBDB1 50S ribosomal protein L25 YP_308371.1 1125743 D 255470 CDS YP_308372.1 73749133 3622996 1126413..1127264 1 NC_007356.1 hypothetical protein 1127264 3622996 cbdb_A1420 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308372.1 1126413 D 255470 CDS YP_308373.1 73749134 3622997 1127257..1127838 1 NC_007356.1 2'-5' RNA ligase 1127838 3622997 cbdb_A1421 Dehalococcoides mccartyi CBDB1 2'-5' RNA ligase YP_308373.1 1127257 D 255470 CDS YP_308374.1 73749135 3622998 1127910..1128113 1 NC_007356.1 hypothetical protein 1128113 3622998 cbdb_A1422 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308374.1 1127910 D 255470 CDS YP_308375.1 73749136 3622999 1128152..1128853 1 NC_007356.1 comF family protein 1128853 3622999 cbdb_A1424 Dehalococcoides mccartyi CBDB1 comF family protein YP_308375.1 1128152 D 255470 CDS YP_308376.1 73749137 3623000 1128867..1129406 1 NC_007356.1 ribosomal subunit interface protein 1129406 3623000 cbdb_A1426 Dehalococcoides mccartyi CBDB1 ribosomal subunit interface protein YP_308376.1 1128867 D 255470 CDS YP_308377.1 73749138 3623698 1129482..1130045 1 NC_007356.1 methylated-DNA--protein-cysteine methyltransferase 1130045 ogt 3623698 ogt Dehalococcoides mccartyi CBDB1 methylated-DNA--protein-cysteine methyltransferase YP_308377.1 1129482 D 255470 CDS YP_308378.1 73749139 3623002 complement(1130023..1130406) 1 NC_007356.1 hypothetical protein 1130406 3623002 cbdb_A1430 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308378.1 1130023 R 255470 CDS YP_308379.1 73749140 3623003 complement(1130429..1131247) 1 NC_007356.1 RadC family DNA repair protein 1131247 3623003 cbdb_A1432 Dehalococcoides mccartyi CBDB1 RadC family DNA repair protein YP_308379.1 1130429 R 255470 CDS YP_308380.1 73749141 3623004 complement(1131231..1131479) 1 NC_007356.1 hypothetical protein 1131479 3623004 cbdb_A1433 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308380.1 1131231 R 255470 CDS YP_308381.1 73749142 3623179 complement(1131463..1134975) 1 NC_007356.1 DNA polymerase III subunit alpha 1134975 dnaE 3623179 dnaE Dehalococcoides mccartyi CBDB1 DNA polymerase III subunit alpha YP_308381.1 1131463 R 255470 CDS YP_308382.1 73749143 3623005 1135122..1135832 1 NC_007356.1 hypothetical protein 1135832 3623005 cbdb_A1437 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308382.1 1135122 D 255470 CDS YP_308383.1 73749144 3623006 complement(1135923..1136339) 1 NC_007356.1 hypothetical protein 1136339 3623006 cbdb_A1438 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308383.1 1135923 R 255470 CDS YP_308384.1 73749145 3623007 complement(1136321..1136443) 1 NC_007356.1 hypothetical protein 1136443 3623007 cbdb_A1439 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308384.1 1136321 R 255470 CDS YP_308385.1 73749146 3623008 complement(1136688..1136903) 1 NC_007356.1 hypothetical protein 1136903 3623008 cbdb_A1440 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308385.1 1136688 R 255470 CDS YP_308386.1 73749147 3622970 1137514..1137738 1 NC_007356.1 hypothetical protein 1137738 3622970 cbdb_B30 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308386.1 1137514 D 255470 CDS YP_308387.1 73749148 3623811 1138150..1139607 1 NC_007356.1 anthranilate synthase component I 1139607 trpE 3623811 trpE Dehalococcoides mccartyi CBDB1 anthranilate synthase component I YP_308387.1 1138150 D 255470 CDS YP_308388.1 73749149 3623813 1139591..1140181 1 NC_007356.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 1140181 trpG 3623813 trpG Dehalococcoides mccartyi CBDB1 anthranilate synthase component II YP_308388.1 1139591 D 255470 CDS YP_308389.1 73749150 3623809 1140186..1141211 1 NC_007356.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1141211 trpD 3623809 trpD Dehalococcoides mccartyi CBDB1 anthranilate phosphoribosyltransferase YP_308389.1 1140186 D 255470 CDS YP_308390.1 73749151 3623558 1141216..1141995 1 NC_007356.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 1141995 trpC 3623558 trpC Dehalococcoides mccartyi CBDB1 indole-3-glycerol phosphate synthase YP_308390.1 1141216 D 255470 CDS YP_308391.1 73749152 3623812 1141992..1142651 1 NC_007356.1 N-(5'-phosphoribosyl)anthranilate isomerase 1142651 trpF 3623812 trpF Dehalococcoides mccartyi CBDB1 N-(5'-phosphoribosyl)anthranilate isomerase YP_308391.1 1141992 D 255470 CDS YP_308392.1 73749153 3623981 1142645..1143667 1 NC_007356.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 1143667 aroA 3623981 aroA Dehalococcoides mccartyi CBDB1 3-deoxy-7-phosphoheptulonate synthase YP_308392.1 1142645 D 255470 CDS YP_308393.1 73749154 3623557 1143655..1144854 1 NC_007356.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1144854 trpB 3623557 trpB Dehalococcoides mccartyi CBDB1 tryptophan synthase subunit beta YP_308393.1 1143655 D 255470 CDS YP_308394.1 73749155 3623556 1144851..1145618 1 NC_007356.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1145618 trpA 3623556 trpA Dehalococcoides mccartyi CBDB1 tryptophan synthase subunit alpha YP_308394.1 1144851 D 255470 CDS YP_308395.1 73749156 3623485 complement(1145731..1146015) 1 NC_007356.1 reductive dehalogenase anchoring protein 1146015 rdhB 3623485 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308395.1 1145731 R 255470 CDS YP_308396.1 73749157 3623214 complement(1146028..1147515) 1 NC_007356.1 reductive dehalogenase 1147515 rdhA 3623214 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308396.1 1146028 R 255470 CDS YP_308397.1 73749158 3623486 complement(1147950..1148222) 1 NC_007356.1 reductive dehalogenase anchoring protein 1148222 rdhB 3623486 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308397.1 1147950 R 255470 CDS YP_308398.1 73749159 3623215 complement(1148252..1149745) 1 NC_007356.1 reductive dehalogenase 1149745 rdhA 3623215 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308398.1 1148252 R 255470 CDS YP_308399.1 73749160 3623429 1149998..1150588 1 NC_007356.1 MarR family transcriptional regulator 1150588 rdhR 3623429 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308399.1 1149998 D 255470 CDS YP_308400.1 73749161 3623357 1150734..1151321 1 NC_007356.1 thymidylate synthase 1151321 thyX 3623357 thyX Dehalococcoides mccartyi CBDB1 thymidylate synthase YP_308400.1 1150734 D 255470 CDS YP_308401.1 73749162 3623010 complement(1151355..1152290) 1 NC_007356.1 peptide ABC transporter ATP-binding protein 1152290 3623010 cbdb_A1458 Dehalococcoides mccartyi CBDB1 peptide ABC transporter ATP-binding protein YP_308401.1 1151355 R 255470 CDS YP_308402.1 73749163 3623011 complement(1152284..1153252) 1 NC_007356.1 peptide ABC transporter ATP-binding protein 1153252 3623011 cbdb_A1459 Dehalococcoides mccartyi CBDB1 peptide ABC transporter ATP-binding protein YP_308402.1 1152284 R 255470 CDS YP_308403.1 73749164 3623012 complement(1153249..1154088) 1 NC_007356.1 peptide ABC transporter permease 1154088 3623012 cbdb_A1461 Dehalococcoides mccartyi CBDB1 peptide ABC transporter permease YP_308403.1 1153249 R 255470 CDS YP_308404.1 73749165 3623888 complement(1154090..1155064) 1 NC_007356.1 peptide ABC transporter permease 1155064 3623888 cbdb_A1462 Dehalococcoides mccartyi CBDB1 peptide ABC transporter permease YP_308404.1 1154090 R 255470 CDS YP_308405.1 73749166 3623889 complement(1155124..1156755) 1 NC_007356.1 peptide ABC transporter substrate-binding protein 1156755 3623889 cbdb_A1463 Dehalococcoides mccartyi CBDB1 peptide ABC transporter substrate-binding protein YP_308405.1 1155124 R 255470 CDS YP_308406.1 73749167 3623890 complement(1156760..1157581) 1 NC_007356.1 hypothetical protein 1157581 3623890 cbdb_A1465 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308406.1 1156760 R 255470 CDS YP_308407.1 73749168 3623891 1157870..1158316 1 NC_007356.1 MarR family transcriptional regulator 1158316 3623891 cbdb_A1466 Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308407.1 1157870 D 255470 CDS YP_308408.1 73749169 3623892 1158460..1158564 1 NC_007356.1 hypothetical protein 1158564 3623892 cbdb_A1467 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308408.1 1158460 D 255470 CDS YP_308409.1 73749170 3623315 1158565..1158957 1 NC_007356.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1158957 3623315 cbdb_A1469 Dehalococcoides mccartyi CBDB1 camphor resistance protein CrcB YP_308409.1 1158565 D 255470 CDS YP_308410.1 73749171 3623316 complement(1159007..1159783) 1 NC_007356.1 hypothetical protein 1159783 3623316 cbdb_A1470 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308410.1 1159007 R 255470 CDS YP_308411.1 73749172 3623317 1159905..1160423 1 NC_007356.1 hypothetical protein 1160423 3623317 cbdb_A1471 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308411.1 1159905 D 255470 CDS YP_308412.1 73749173 3623318 1160449..1160883 1 NC_007356.1 flavodoxin 1160883 3623318 cbdb_A1472 Dehalococcoides mccartyi CBDB1 flavodoxin YP_308412.1 1160449 D 255470 CDS YP_308413.1 73749174 3623319 complement(1160994..1162391) 1 NC_007356.1 major facilitator family transporter 1162391 3623319 cbdb_A1474 Dehalococcoides mccartyi CBDB1 major facilitator family transporter YP_308413.1 1160994 R 255470 CDS YP_308414.1 73749175 3623293 complement(1162443..1164173) 1 NC_007356.1 ferrous iron transport protein B 1164173 feoB 3623293 feoB Dehalococcoides mccartyi CBDB1 ferrous iron transport protein B YP_308414.1 1162443 R 255470 CDS YP_308415.1 73749176 3623292 complement(1164170..1164415) 1 NC_007356.1 iron(II) transport protein A 1164415 feoA 3623292 feoA Dehalococcoides mccartyi CBDB1 iron(II) transport protein A YP_308415.1 1164170 R 255470 CDS YP_308416.1 73749177 3623320 complement(1164455..1164880) 1 NC_007356.1 FUR family transcriptional regulator 1164880 3623320 cbdb_A1478 Dehalococcoides mccartyi CBDB1 FUR family transcriptional regulator YP_308416.1 1164455 R 255470 CDS YP_308417.1 73749178 3622852 1164955..1165473 1 NC_007356.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1165473 smpB 3622852 smpB Dehalococcoides mccartyi CBDB1 SsrA-binding protein YP_308417.1 1164955 D 255470 CDS YP_308418.1 73749179 3623322 complement(1165760..1167427) 1 NC_007356.1 site-specific recombinase 1167427 3623322 cbdb_A1480 Dehalococcoides mccartyi CBDB1 site-specific recombinase YP_308418.1 1165760 R 255470 CDS YP_308419.1 73749180 3623323 complement(1167601..1168218) 1 NC_007356.1 DNA invertase/resolvase 1168218 3623323 cbdb_A1481 Dehalococcoides mccartyi CBDB1 DNA invertase/resolvase YP_308419.1 1167601 R 255470 CDS YP_308420.1 73749181 3623324 complement(1168218..1168667) 1 NC_007356.1 hypothetical protein 1168667 3623324 cbdb_A1482 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308420.1 1168218 R 255470 CDS YP_308421.1 73749182 3623325 complement(1168911..1169546) 1 NC_007356.1 hypothetical protein 1169546 3623325 cbdb_A1483 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308421.1 1168911 R 255470 CDS YP_308422.1 73749183 3623326 complement(1170232..1172439) 1 NC_007356.1 hypothetical protein 1172439 3623326 cbdb_A1485 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308422.1 1170232 R 255470 CDS YP_308423.1 73749184 3623327 complement(1172517..1173272) 1 NC_007356.1 hypothetical protein 1173272 3623327 cbdb_A1486 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308423.1 1172517 R 255470 CDS YP_308424.1 73749185 3622971 1173656..1173934 1 NC_007356.1 IS3 family transposase 1173934 3622971 cbdb_B31 Dehalococcoides mccartyi CBDB1 IS3 family transposase YP_308424.1 1173656 D 255470 CDS YP_308425.1 73749186 3623328 1173967..1174770 1 NC_007356.1 transposase orfB 1174770 3623328 cbdb_A1487 Dehalococcoides mccartyi CBDB1 transposase orfB YP_308425.1 1173967 D 255470 CDS YP_308426.1 73749187 3623848 1174814..1175929 1 NC_007356.1 methyltransferase 1175929 3623848 cbdb_A1488 Dehalococcoides mccartyi CBDB1 methyltransferase YP_308426.1 1174814 D 255470 CDS YP_308427.1 73749188 3623849 1175929..1176696 1 NC_007356.1 hypothetical protein 1176696 3623849 cbdb_A1489 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308427.1 1175929 D 255470 CDS YP_308428.1 73749189 3623700 complement(1176883..1177155) 1 NC_007356.1 reductive dehalogenase anchoring protein 1177155 rdhB 3623700 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308428.1 1176883 R 255470 CDS YP_308429.1 73749190 3623216 complement(1177174..1178622) 1 NC_007356.1 reductive dehalogenase 1178622 rdhA 3623216 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308429.1 1177174 R 255470 CDS YP_308430.1 73749191 3623838 1179150..1180466 1 NC_007356.1 sensor histidine kinase 1180466 rdhC 3623838 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308430.1 1179150 D 255470 CDS YP_308431.1 73749192 3623873 1180453..1181136 1 NC_007356.1 DNA-binding response regulator 1181136 rdhD 3623873 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308431.1 1180453 D 255470 CDS YP_308432.1 73749193 3623850 complement(1181628..1182164) 1 NC_007356.1 hypothetical protein 1182164 3623850 cbdb_A1494 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308432.1 1181628 R 255470 CDS YP_308433.1 73749194 3623130 complement(1182154..1182774) 1 NC_007356.1 hypothetical protein 1182774 rdhG 3623130 rdhG Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308433.1 1182154 R 255470 CDS YP_308434.1 73749195 3623833 complement(1182844..1183119) 1 NC_007356.1 reductive dehalogenase anchoring protein 1183119 rdhB 3623833 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308434.1 1182844 R 255470 CDS YP_308435.1 73749196 3623217 complement(1183152..1184669) 1 NC_007356.1 reductive dehalogenase 1184669 rdhA 3623217 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308435.1 1183152 R 255470 CDS YP_308436.1 73749197 3623839 1184972..1186270 1 NC_007356.1 sensor histidine kinase 1186270 rdhC 3623839 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308436.1 1184972 D 255470 CDS YP_308437.1 73749198 3623874 1186279..1186950 1 NC_007356.1 DNA-binding response regulator 1186950 rdhD 3623874 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308437.1 1186279 D 255470 CDS YP_308438.1 73749199 3623117 complement(1187286..1188050) 1 NC_007356.1 hypothetical protein 1188050 rdhF 3623117 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308438.1 1187286 R 255470 CDS YP_308439.1 73749200 3623853 complement(1188377..1188688) 1 NC_007356.1 hypothetical protein 1188688 3623853 cbdb_A1501 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308439.1 1188377 R 255470 CDS YP_308440.1 73749201 3623532 complement(1188744..1189172) 1 NC_007356.1 hypothetical protein 1189172 3623532 cbdb_B34 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308440.1 1188744 R 255470 CDS YP_308441.1 73749202 3623701 complement(1189227..1189520) 1 NC_007356.1 reductive dehalogenase anchoring protein 1189520 rdhB 3623701 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308441.1 1189227 R 255470 CDS YP_308442.1 73749203 3623218 complement(1189522..1191102) 1 NC_007356.1 reductive dehalogenase 1191102 rdhA 3623218 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308442.1 1189522 R 255470 CDS YP_308443.1 73749204 3623854 complement(1191222..1191335) 1 NC_007356.1 hypothetical protein 1191335 3623854 cbdb_A1504 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308443.1 1191222 R 255470 CDS YP_308444.1 73749205 3623855 complement(1191934..1192389) 1 NC_007356.1 hypothetical protein 1192389 3623855 cbdb_A1505 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308444.1 1191934 R 255470 CDS YP_308445.1 73749206 3623124 complement(1192394..1192969) 1 NC_007356.1 hypothetical protein 1192969 rdhG 3623124 rdhG Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308445.1 1192394 R 255470 CDS YP_308446.1 73749207 3623702 complement(1193044..1193313) 1 NC_007356.1 reductive dehalogenase anchoring protein 1193313 rdhB 3623702 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308446.1 1193044 R 255470 CDS YP_308447.1 73749208 3623219 complement(1193343..1194734) 1 NC_007356.1 reductive dehalogenase 1194734 rdhA 3623219 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308447.1 1193343 R 255470 CDS YP_308448.1 73749209 3623430 1195021..1195560 1 NC_007356.1 MarR family transcriptional regulator 1195560 rdhR 3623430 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308448.1 1195021 D 255470 CDS YP_308449.1 73749210 3623533 complement(1196186..1196395) 1 NC_007356.1 hypothetical protein 1196395 3623533 cbdb_B35 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308449.1 1196186 R 255470 CDS YP_308450.1 73749211 3623875 1196848..1197519 1 NC_007356.1 DNA-binding response regulator 1197519 rdhD 3623875 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308450.1 1196848 D 255470 CDS YP_308451.1 73749212 3623857 1197506..1198918 1 NC_007356.1 sensor histidine kinase 1198918 3623857 cbdb_A1512 Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308451.1 1197506 D 255470 CDS YP_308452.1 73749213 3623858 1199927..1200145 1 NC_007356.1 hypothetical protein 1200145 3623858 cbdb_A1513 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308452.1 1199927 D 255470 CDS YP_308453.1 73749214 3623859 complement(1200212..1200379) 1 NC_007356.1 hypothetical protein 1200379 3623859 cbdb_A1514 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308453.1 1200212 R 255470 CDS YP_308454.1 73749215 3623860 complement(1200421..1200657) 1 NC_007356.1 hypothetical protein 1200657 3623860 cbdb_A1516 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308454.1 1200421 R 255470 CDS YP_308455.1 73749216 3623861 complement(1201240..1201389) 1 NC_007356.1 hypothetical protein 1201389 3623861 cbdb_A1517 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308455.1 1201240 R 255470 CDS YP_308456.1 73749217 3622771 complement(1203162..1204091) 1 NC_007356.1 CRISPR-associated Cas1 family protein 1204091 cas1 3622771 cas1 Dehalococcoides mccartyi CBDB1 CRISPR-associated Cas1 family protein YP_308456.1 1203162 R 255470 CDS YP_308457.1 73749218 3623862 complement(1204091..1204720) 1 NC_007356.1 CRISPR-associated protein 1204720 3623862 cbdb_A1519 Dehalococcoides mccartyi CBDB1 CRISPR-associated protein YP_308457.1 1204091 R 255470 CDS YP_308458.1 73749219 3623534 complement(1204745..1205362) 1 NC_007356.1 hypothetical protein 1205362 3623534 cbdb_B36 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308458.1 1204745 R 255470 CDS YP_308459.1 73749220 3623863 complement(1205359..1206642) 1 NC_007356.1 hypothetical protein 1206642 3623863 cbdb_A1520 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308459.1 1205359 R 255470 CDS YP_308460.1 73749221 3623076 complement(1206635..1207168) 1 NC_007356.1 hypothetical protein 1207168 3623076 cbdb_B37 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308460.1 1206635 R 255470 CDS YP_308461.1 73749222 3623864 complement(1207158..1208789) 1 NC_007356.1 hypothetical protein 1208789 3623864 cbdb_A1521 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308461.1 1207158 R 255470 CDS YP_308462.1 73749223 3622772 complement(1208782..1211475) 1 NC_007356.1 CRISPR-associated helicase Cas3 family protein 1211475 cas3 3622772 cas3 Dehalococcoides mccartyi CBDB1 CRISPR-associated helicase Cas3 family protein YP_308462.1 1208782 R 255470 CDS YP_308463.1 73749224 3623865 complement(1211697..1212497) 1 NC_007356.1 hypothetical protein 1212497 3623865 cbdb_A1523 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308463.1 1211697 R 255470 CDS YP_308464.1 73749225 3623866 complement(1212940..1213278) 1 NC_007356.1 hypothetical protein 1213278 3623866 cbdb_A1524 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308464.1 1212940 R 255470 CDS YP_308465.1 73749226 3623077 complement(1213400..1213894) 1 NC_007356.1 hypothetical protein 1213894 3623077 cbdb_B38 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308465.1 1213400 R 255470 CDS YP_308466.1 73749227 3623867 complement(1214057..1215535) 1 NC_007356.1 hypothetical protein 1215535 3623867 cbdb_A1527 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308466.1 1214057 R 255470 CDS YP_308467.1 73749228 3623507 complement(1215673..1216779) 1 NC_007356.1 hypothetical protein 1216779 3623507 cbdb_A1529 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308467.1 1215673 R 255470 CDS YP_308468.1 73749229 3623509 complement(1216776..1218071) 1 NC_007356.1 ATPase AAA 1218071 3623509 cbdb_A1530 Dehalococcoides mccartyi CBDB1 ATPase AAA YP_308468.1 1216776 R 255470 CDS YP_308469.1 73749230 3623510 1218246..1218716 1 NC_007356.1 hypothetical protein 1218716 3623510 cbdb_A1531 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308469.1 1218246 D 255470 CDS YP_308470.1 73749231 3623511 1218773..1219822 1 NC_007356.1 transcriptional regulator 1219822 3623511 cbdb_A1532 Dehalococcoides mccartyi CBDB1 transcriptional regulator YP_308470.1 1218773 D 255470 CDS YP_308471.1 73749232 3623512 1220195..1220806 1 NC_007356.1 hypothetical protein 1220806 3623512 cbdb_A1533 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308471.1 1220195 D 255470 CDS YP_308472.1 73749233 3623078 1220781..1221218 1 NC_007356.1 hypothetical protein 1221218 3623078 cbdb_B39 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308472.1 1220781 D 255470 CDS YP_308473.1 73749234 3623431 1221553..1222041 1 NC_007356.1 MarR family transcriptional regulator 1222041 rdhR 3623431 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308473.1 1221553 D 255470 CDS YP_308474.1 73749235 3623220 1222599..1224086 1 NC_007356.1 reductive dehalogenase 1224086 rdhA 3623220 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308474.1 1222599 D 255470 CDS YP_308475.1 73749236 3623703 1224114..1224383 1 NC_007356.1 reductive dehalogenase anchoring protein 1224383 rdhB 3623703 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308475.1 1224114 D 255470 CDS YP_308476.1 73749237 3623125 1224519..1225085 1 NC_007356.1 hypothetical protein 1225085 rdhG 3623125 rdhG Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308476.1 1224519 D 255470 CDS YP_308477.1 73749238 3623131 1225085..1225819 1 NC_007356.1 hypothetical protein 1225819 rdhH 3623131 rdhH Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308477.1 1225085 D 255470 CDS YP_308478.1 73749239 3623835 complement(1226129..1226410) 1 NC_007356.1 reductive dehalogenase anchoring protein 1226410 rdhB 3623835 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308478.1 1226129 R 255470 CDS YP_308479.1 73749240 3623221 complement(1226459..1227841) 1 NC_007356.1 reductive dehalogenase 1227841 rdhA 3623221 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308479.1 1226459 R 255470 CDS YP_308480.1 73749241 3623514 complement(1227975..1228127) 1 NC_007356.1 reductive dehalogenase- N-terminal fragment 1228127 3623514 cbdb_A1540 Dehalococcoides mccartyi CBDB1 reductive dehalogenase- N-terminal fragment YP_308480.1 1227975 R 255470 CDS YP_308481.1 73749242 3623704 complement(1228683..1228955) 1 NC_007356.1 reductive dehalogenase anchoring protein 1228955 rdhB 3623704 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308481.1 1228683 R 255470 CDS YP_308482.1 73749243 3623222 complement(1228967..1230430) 1 NC_007356.1 reductive dehalogenase 1230430 rdhA 3623222 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308482.1 1228967 R 255470 CDS YP_308483.1 73749244 3623840 1230682..1232295 1 NC_007356.1 sensor histidine kinase 1232295 rdhC 3623840 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308483.1 1230682 D 255470 CDS YP_308484.1 73749245 3623876 1232301..1232987 1 NC_007356.1 DNA-binding response regulator 1232987 rdhD 3623876 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308484.1 1232301 D 255470 CDS YP_308485.1 73749246 3623705 complement(1233375..1233662) 1 NC_007356.1 reductive dehalogenase anchoring protein 1233662 rdhB 3623705 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308485.1 1233375 R 255470 CDS YP_308486.1 73749247 3623223 complement(1233683..1235200) 1 NC_007356.1 reductive dehalogenase 1235200 rdhA 3623223 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308486.1 1233683 R 255470 CDS YP_308487.1 73749248 3623841 1235417..1236586 1 NC_007356.1 sensor histidine kinase 1236586 rdhC 3623841 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308487.1 1235417 D 255470 CDS YP_308488.1 73749249 3623877 1236600..1237316 1 NC_007356.1 LuxR family transcriptional regulator 1237316 rdhD 3623877 rdhD Dehalococcoides mccartyi CBDB1 LuxR family transcriptional regulator YP_308488.1 1236600 D 255470 CDS YP_308489.1 73749250 3623706 complement(1237596..1237865) 1 NC_007356.1 reductive dehalogenase anchoring protein 1237865 rdhB 3623706 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308489.1 1237596 R 255470 CDS YP_308490.1 73749251 3623444 complement(1237886..1239412) 1 NC_007356.1 reductive dehalogenase 1239412 rdhA 3623444 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308490.1 1237886 R 255470 CDS YP_308491.1 73749252 3623878 complement(1239510..1240151) 1 NC_007356.1 DNA-binding response regulator 1240151 rdhD 3623878 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308491.1 1239510 R 255470 CDS YP_308492.1 73749253 3623879 complement(1240329..1241021) 1 NC_007356.1 DNA-binding response regulator 1241021 rdhD 3623879 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308492.1 1240329 R 255470 CDS YP_308493.1 73749254 3623432 1241686..1242198 1 NC_007356.1 MarR family transcriptional regulator 1242198 rdhR 3623432 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308493.1 1241686 D 255470 CDS YP_308494.1 73749255 3623118 complement(1242331..1243011) 1 NC_007356.1 hypothetical protein 1243011 rdhF 3623118 rdhF Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308494.1 1242331 R 255470 CDS YP_308495.1 73749256 3623421 complement(1243354..1244211) 1 NC_007356.1 radical SAM domain-containing protein 1244211 rdhI 3623421 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_308495.1 1243354 R 255470 CDS YP_308496.1 73749257 3623422 complement(1244208..1244966) 1 NC_007356.1 radical SAM domain-containing protein 1244966 rdhI 3623422 rdhI Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_308496.1 1244208 R 255470 CDS YP_308497.1 73749258 3623126 complement(1244996..1245568) 1 NC_007356.1 hypothetical protein 1245568 rdhG 3623126 rdhG Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308497.1 1244996 R 255470 CDS YP_308498.1 73749259 3623707 complement(1245686..1245958) 1 NC_007356.1 reductive dehalogenase anchoring protein 1245958 rdhB 3623707 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308498.1 1245686 R 255470 CDS YP_308499.1 73749260 3623445 complement(1245976..1247517) 1 NC_007356.1 reductive dehalogenase 1247517 rdhA 3623445 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308499.1 1245976 R 255470 CDS YP_308500.1 73749261 3623516 complement(1247670..1247789) 1 NC_007356.1 hypothetical protein 1247789 3623516 cbdb_A1561 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308500.1 1247670 R 255470 CDS YP_308501.1 73749262 3623708 complement(1248269..1248556) 1 NC_007356.1 reductive dehalogenase anchoring protein 1248556 rdhB 3623708 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308501.1 1248269 R 255470 CDS YP_308502.1 73749263 3623446 complement(1248605..1250002) 1 NC_007356.1 reductive dehalogenase 1250002 rdhA 3623446 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308502.1 1248605 R 255470 CDS YP_308503.1 73749264 3623880 complement(1250136..1250828) 1 NC_007356.1 DNA-binding response regulator 1250828 rdhD 3623880 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308503.1 1250136 R 255470 CDS YP_308504.1 73749265 3623842 complement(1250829..1252574) 1 NC_007356.1 sensor histidine kinase 1252574 rdhC 3623842 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308504.1 1250829 R 255470 CDS YP_308505.1 73749266 3623517 complement(1252550..1253173) 1 NC_007356.1 hypothetical protein 1253173 3623517 cbdb_A1566 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308505.1 1252550 R 255470 CDS YP_308506.1 73749267 3623881 complement(1253762..1254736) 1 NC_007356.1 regulatory protein 1254736 rdhD 3623881 rdhD Dehalococcoides mccartyi CBDB1 regulatory protein YP_308506.1 1253762 R 255470 CDS YP_308507.1 73749268 3623079 1255274..1255504 1 NC_007356.1 hypothetical protein 1255504 3623079 cbdb_B41 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308507.1 1255274 D 255470 CDS YP_308508.1 73749269 3623602 1255494..1256999 1 NC_007356.1 glutamine synthetase 1256999 glnA 3623602 glnA Dehalococcoides mccartyi CBDB1 glutamine synthetase YP_308508.1 1255494 D 255470 CDS YP_308509.1 73749270 3623709 complement(1257362..1257631) 1 NC_007356.1 reductive dehalogenase anchoring protein 1257631 rdhB 3623709 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308509.1 1257362 R 255470 CDS YP_308510.1 73749271 3623447 complement(1257652..1259175) 1 NC_007356.1 reductive dehalogenase 1259175 rdhA 3623447 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308510.1 1257652 R 255470 CDS YP_308511.1 73749272 3623433 1259380..1259886 1 NC_007356.1 MarR family transcriptional regulator 1259886 rdhR 3623433 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308511.1 1259380 D 255470 CDS YP_308512.1 73749273 3623080 complement(1259895..1260284) 1 NC_007356.1 IS1477 transposase, orfB (fragment) 1260284 3623080 cbdb_B42 Dehalococcoides mccartyi CBDB1 IS1477 transposase, orfB (fragment) YP_308512.1 1259895 R 255470 CDS YP_308513.1 73749274 3623519 1260902..1262863 1 NC_007356.1 hypothetical protein 1262863 3623519 cbdb_A1572 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308513.1 1260902 D 255470 CDS YP_308514.1 73749275 3623710 complement(1263219..1263506) 1 NC_007356.1 reductive dehalogenase anchoring protein 1263506 rdhB 3623710 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308514.1 1263219 R 255470 CDS YP_308515.1 73749276 3623448 complement(1263534..1265051) 1 NC_007356.1 reductive dehalogenase 1265051 rdhA 3623448 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308515.1 1263534 R 255470 CDS YP_308516.1 73749277 3623434 1265283..1265759 1 NC_007356.1 MarR family transcriptional regulator 1265759 rdhR 3623434 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308516.1 1265283 D 255470 CDS YP_308517.1 73749278 3623711 complement(1266163..1266450) 1 NC_007356.1 reductive dehalogenase anchoring protein 1266450 rdhB 3623711 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308517.1 1266163 R 255470 CDS YP_308518.1 73749279 3623468 complement(1266472..1267989) 1 NC_007356.1 reductive dehalogenase 1267989 rdhA 3623468 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308518.1 1266472 R 255470 CDS YP_308519.1 73749280 3623416 complement(1268179..1268916) 1 NC_007356.1 hypothetical protein 1268916 rdhH 3623416 rdhH Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308519.1 1268179 R 255470 CDS YP_308520.1 73749281 3623127 complement(1268916..1269482) 1 NC_007356.1 hypothetical protein 1269482 rdhG 3623127 rdhG Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308520.1 1268916 R 255470 CDS YP_308521.1 73749282 3623712 complement(1269618..1269887) 1 NC_007356.1 reductive dehalogenase anchoring protein 1269887 rdhB 3623712 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308521.1 1269618 R 255470 CDS YP_308522.1 73749283 3623469 complement(1269916..1271391) 1 NC_007356.1 reductive dehalogenase 1271391 rdhA 3623469 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308522.1 1269916 R 255470 CDS YP_308523.1 73749284 3623435 complement(1271952..1272473) 1 NC_007356.1 MarR family transcriptional regulator 1272473 rdhR 3623435 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308523.1 1271952 R 255470 CDS YP_308524.1 73749285 3623068 complement(1272538..1272696) 1 NC_007356.1 hypothetical protein 1272696 3623068 cbdb_A1584 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308524.1 1272538 R 255470 CDS YP_308525.1 73749286 3623893 complement(1272854..1273303) 1 NC_007356.1 hypothetical protein 1273303 3623893 cbdb_A1585 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308525.1 1272854 R 255470 CDS YP_308526.1 73749287 3623128 complement(1273308..1273883) 1 NC_007356.1 hypothetical protein 1273883 rdhG 3623128 rdhG Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308526.1 1273308 R 255470 CDS YP_308527.1 73749288 3623713 complement(1273958..1274227) 1 NC_007356.1 reductive dehalogenase anchoring protein 1274227 rdhB 3623713 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308527.1 1273958 R 255470 CDS YP_308528.1 73749289 3623470 complement(1274257..1275744) 1 NC_007356.1 reductive dehalogenase 1275744 rdhA 3623470 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308528.1 1274257 R 255470 CDS YP_308529.1 73749290 3623882 complement(1276045..1276722) 1 NC_007356.1 DNA-binding response regulator 1276722 rdhD 3623882 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308529.1 1276045 R 255470 CDS YP_308530.1 73749291 3623843 complement(1276697..1278301) 1 NC_007356.1 sensor histidine kinase 1278301 rdhC 3623843 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308530.1 1276697 R 255470 CDS YP_308531.1 73749292 3623895 1278634..1281912 1 NC_007356.1 sensor histidine kinase/response regulator 1281912 3623895 cbdb_A1591 Dehalococcoides mccartyi CBDB1 sensor histidine kinase/response regulator YP_308531.1 1278634 D 255470 CDS YP_308532.1 73749293 3623896 complement(1282026..1282424) 1 NC_007356.1 nitrogenase iron-molybdenum cofactor maturation domain-containing protein 1282424 3623896 cbdb_A1593 Dehalococcoides mccartyi CBDB1 nitrogenase iron-molybdenum cofactor maturation domain-containing protein YP_308532.1 1282026 R 255470 CDS YP_308533.1 73749294 3623714 complement(1282704..1282973) 1 NC_007356.1 reductive dehalogenase anchoring protein 1282973 rdhB 3623714 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308533.1 1282704 R 255470 CDS YP_308534.1 73749295 3623471 complement(1283001..1284485) 1 NC_007356.1 reductive dehalogenase 1284485 rdhA 3623471 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308534.1 1283001 R 255470 CDS YP_308535.1 73749296 3623397 1285082..1285597 1 NC_007356.1 MarR family transcriptional regulator 1285597 rdhR 3623397 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308535.1 1285082 D 255470 CDS YP_308536.1 73749297 3623715 complement(1285663..1285935) 1 NC_007356.1 reductive dehalogenase anchoring protein 1285935 rdhB 3623715 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308536.1 1285663 R 255470 CDS YP_308537.1 73749298 3623472 complement(1285951..1287450) 1 NC_007356.1 reductive dehalogenase 1287450 rdhA 3623472 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308537.1 1285951 R 255470 CDS YP_308538.1 73749299 3623487 1287890..1288525 1 NC_007356.1 hypothetical protein 1288525 3623487 cbdb_A1599 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308538.1 1287890 D 255470 CDS YP_308539.1 73749300 3623871 1289094..1293398 1 NC_007356.1 sensor histidine kinase/response regulator 1293398 rdhCD 3623871 rdhCD Dehalococcoides mccartyi CBDB1 sensor histidine kinase/response regulator YP_308539.1 1289094 D 255470 CDS YP_308540.1 73749301 3623883 1293398..1294453 1 NC_007356.1 response regulator 1294453 rdhD 3623883 rdhD Dehalococcoides mccartyi CBDB1 response regulator YP_308540.1 1293398 D 255470 CDS YP_308541.1 73749302 3623488 complement(1294567..1294968) 1 NC_007356.1 hypothetical protein 1294968 3623488 cbdb_A1604 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308541.1 1294567 R 255470 CDS YP_308542.1 73749303 3623489 complement(1294987..1295529) 1 NC_007356.1 hypothetical protein 1295529 3623489 cbdb_A1605 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308542.1 1294987 R 255470 CDS YP_308543.1 73749304 3623490 complement(1295676..1296131) 1 NC_007356.1 hypothetical protein 1296131 3623490 cbdb_A1606 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308543.1 1295676 R 255470 CDS YP_308544.1 73749305 3623491 complement(1296147..1296743) 1 NC_007356.1 hypothetical protein 1296743 3623491 cbdb_A1607 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308544.1 1296147 R 255470 CDS YP_308545.1 73749306 3623492 1297148..1299706 1 NC_007356.1 sensor histidine kinase/response regulator 1299706 3623492 cbdb_A1608 Dehalococcoides mccartyi CBDB1 sensor histidine kinase/response regulator YP_308545.1 1297148 D 255470 CDS YP_308546.1 73749307 3623493 1299780..1300460 1 NC_007356.1 hypothetical protein 1300460 3623493 cbdb_A1609 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308546.1 1299780 D 255470 CDS YP_308547.1 73749308 3623494 complement(1300611..1301048) 1 NC_007356.1 hypothetical protein 1301048 3623494 cbdb_A1610 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308547.1 1300611 R 255470 CDS YP_308548.1 73749309 3623495 complement(1301068..1301499) 1 NC_007356.1 MerR family transcriptional regulator 1301499 3623495 cbdb_A1611 Dehalococcoides mccartyi CBDB1 MerR family transcriptional regulator YP_308548.1 1301068 R 255470 CDS YP_308549.1 73749310 3623496 1301618..1303570 1 NC_007356.1 ABC-transporter ATPase/permease 1303570 3623496 cbdb_A1612 Dehalococcoides mccartyi CBDB1 ABC-transporter ATPase/permease YP_308549.1 1301618 D 255470 CDS YP_308550.1 73749311 3623497 1303725..1305476 1 NC_007356.1 hypothetical protein 1305476 3623497 cbdb_A1613 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308550.1 1303725 D 255470 CDS YP_308551.1 73749312 3623498 complement(1305652..1308666) 1 NC_007356.1 integral membrane efflux protein 1308666 3623498 cbdb_A1614 Dehalococcoides mccartyi CBDB1 integral membrane efflux protein YP_308551.1 1305652 R 255470 CDS YP_308552.1 73749313 3623398 complement(1308689..1309138) 1 NC_007356.1 MarR family transcriptional regulator 1309138 rdhR 3623398 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308552.1 1308689 R 255470 CDS YP_308553.1 73749314 3623716 complement(1309393..1309665) 1 NC_007356.1 reductive dehalogenase anchoring protein 1309665 rdhB 3623716 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308553.1 1309393 R 255470 CDS YP_308554.1 73749315 3623473 complement(1309684..1311111) 1 NC_007356.1 reductive dehalogenase 1311111 rdhA 3623473 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308554.1 1309684 R 255470 CDS YP_308555.1 73749316 3623399 1311430..1311954 1 NC_007356.1 MarR family transcriptional regulator 1311954 rdhR 3623399 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308555.1 1311430 D 255470 CDS YP_308556.1 73749317 3623500 complement(1311996..1314128) 1 NC_007356.1 radical SAM protein 1314128 3623500 cbdb_A1620 Dehalococcoides mccartyi CBDB1 radical SAM protein YP_308556.1 1311996 R 255470 CDS YP_308557.1 73749318 3623501 complement(1314289..1315950) 1 NC_007356.1 major facilitator family transporter 1315950 3623501 cbdb_A1621 Dehalococcoides mccartyi CBDB1 major facilitator family transporter YP_308557.1 1314289 R 255470 CDS YP_308558.1 73749319 3623400 complement(1315966..1316400) 1 NC_007356.1 MarR family transcriptional regulator 1316400 rdhR 3623400 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308558.1 1315966 R 255470 CDS YP_308559.1 73749320 3623717 complement(1316606..1316890) 1 NC_007356.1 reductive dehalogenase anchoring protein 1316890 rdhB 3623717 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308559.1 1316606 R 255470 CDS YP_308560.1 73749321 3623474 complement(1316903..1318390) 1 NC_007356.1 reductive dehalogenase 1318390 rdhA 3623474 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308560.1 1316903 R 255470 CDS YP_308561.1 73749322 3623401 1318637..1319125 1 NC_007356.1 MarR family transcriptional regulator 1319125 rdhR 3623401 rdhR Dehalococcoides mccartyi CBDB1 MarR family transcriptional regulator YP_308561.1 1318637 D 255470 CDS YP_308562.1 73749323 3623718 complement(1319200..1319472) 1 NC_007356.1 reductive dehalogenase anchoring protein 1319472 rdhB 3623718 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308562.1 1319200 R 255470 CDS YP_308563.1 73749324 3623475 complement(1319491..1320969) 1 NC_007356.1 reductive dehalogenase 1320969 rdhA 3623475 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308563.1 1319491 R 255470 CDS YP_308564.1 73749325 3623844 1321244..1322422 1 NC_007356.1 sensor histidine kinase 1322422 rdhC 3623844 rdhC Dehalococcoides mccartyi CBDB1 sensor histidine kinase YP_308564.1 1321244 D 255470 CDS YP_308565.1 73749326 3623884 1322419..1323096 1 NC_007356.1 DNA-binding response regulator 1323096 rdhD 3623884 rdhD Dehalococcoides mccartyi CBDB1 DNA-binding response regulator YP_308565.1 1322419 D 255470 CDS YP_308566.1 73749327 3623502 complement(1323170..1323526) 1 NC_007356.1 hypothetical protein 1323526 3623502 cbdb_A1633 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308566.1 1323170 R 255470 CDS YP_308567.1 73749328 3623503 complement(1323683..1324516) 1 NC_007356.1 hypothetical protein 1324516 3623503 cbdb_A1635 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308567.1 1323683 R 255470 CDS YP_308568.1 73749329 3623719 complement(1324794..1325066) 1 NC_007356.1 reductive dehalogenase anchoring protein 1325066 rdhB 3623719 rdhB Dehalococcoides mccartyi CBDB1 reductive dehalogenase anchoring protein YP_308568.1 1324794 R 255470 CDS YP_308569.1 73749330 3623476 complement(1325086..1326588) 1 NC_007356.1 reductive dehalogenase 1326588 rdhA 3623476 rdhA Dehalococcoides mccartyi CBDB1 reductive dehalogenase YP_308569.1 1325086 R 255470 CDS YP_308570.1 73749331 3623965 complement(1326986..1327816) 1 NC_007356.1 prephenate dehydratase 1327816 pheA 3623965 pheA Dehalococcoides mccartyi CBDB1 prephenate dehydratase YP_308570.1 1326986 R 255470 CDS YP_308571.1 73749332 3623505 complement(1328263..1329111) 1 NC_007356.1 hypothetical protein 1329111 3623505 cbdb_A1640 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308571.1 1328263 R 255470 CDS YP_308572.1 73749333 3623785 complement(1329124..1329342) 1 NC_007356.1 preprotein translocase subunit SecG 1329342 secG 3623785 secG Dehalococcoides mccartyi CBDB1 preprotein translocase subunit SecG YP_308572.1 1329124 R 255470 CDS YP_308573.1 73749334 3622850 complement(1329345..1330823) 1 NC_007356.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1330823 gatB 3622850 gatB Dehalococcoides mccartyi CBDB1 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_308573.1 1329345 R 255470 CDS YP_308574.1 73749335 3623506 1331127..1331831 1 NC_007356.1 hypothetical protein 1331831 3623506 cbdb_A1644 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308574.1 1331127 D 255470 CDS YP_308575.1 73749336 3623449 complement(1332008..1332172) 1 NC_007356.1 hypothetical protein 1332172 3623449 cbdb_A1646 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308575.1 1332008 R 255470 CDS YP_308576.1 73749337 3623081 complement(1332193..1332450) 1 NC_007356.1 (Fe-S)-binding protein 1332450 3623081 cbdb_B43 Dehalococcoides mccartyi CBDB1 (Fe-S)-binding protein YP_308576.1 1332193 R 255470 CDS YP_308577.1 73749338 3623450 complement(1332468..1333145) 1 NC_007356.1 MerR family transcriptional regulator 1333145 3623450 cbdb_A1647 Dehalococcoides mccartyi CBDB1 MerR family transcriptional regulator YP_308577.1 1332468 R 255470 CDS YP_308578.1 73749339 3623451 complement(1333272..1334309) 1 NC_007356.1 hypothetical protein 1334309 3623451 cbdb_A1648 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308578.1 1333272 R 255470 CDS YP_308579.1 73749340 3623452 complement(1334526..1334825) 1 NC_007356.1 hypothetical protein 1334825 3623452 cbdb_A1649 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308579.1 1334526 R 255470 CDS YP_308580.1 73749341 3623453 complement(1334825..1335217) 1 NC_007356.1 hypothetical protein 1335217 3623453 cbdb_A1650 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308580.1 1334825 R 255470 CDS YP_308581.1 73749342 3623454 1335279..1335416 1 NC_007356.1 hypothetical protein 1335416 3623454 cbdb_A1651 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308581.1 1335279 D 255470 CDS YP_308582.1 73749343 3622758 complement(1335458..1335973) 1 NC_007356.1 hydrogenase 4 subunit HycG 1335973 hycG 3622758 hycG Dehalococcoides mccartyi CBDB1 hydrogenase 4 subunit HycG YP_308582.1 1335458 R 255470 CDS YP_308583.1 73749344 3622757 complement(1335984..1337564) 1 NC_007356.1 hydrogenase 4 subunit HycE 1337564 hycE 3622757 hycE Dehalococcoides mccartyi CBDB1 hydrogenase 4 subunit HycE YP_308583.1 1335984 R 255470 CDS YP_308584.1 73749345 3623455 complement(1337568..1338962) 1 NC_007356.1 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase membrane subunit 1338962 3623455 cbdb_A1655 Dehalococcoides mccartyi CBDB1 hydrogenase membrane subunit YP_308584.1 1337568 R 255470 CDS YP_308585.1 73749346 3623456 complement(1339049..1339729) 1 NC_007356.1 hydrogenase subunit 1339729 3623456 cbdb_A1656 Dehalococcoides mccartyi CBDB1 hydrogenase subunit YP_308585.1 1339049 R 255470 CDS YP_308586.1 73749347 3622756 complement(1339733..1340674) 1 NC_007356.1 hydrogenase, HycD subunit 1340674 hycD 3622756 hycD Dehalococcoides mccartyi CBDB1 hydrogenase, HycD subunit YP_308586.1 1339733 R 255470 CDS YP_308587.1 73749348 3622755 complement(1340671..1342605) 1 NC_007356.1 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase membrane subunit 1342605 hycC 3622755 hycC Dehalococcoides mccartyi CBDB1 hydrogenase membrane subunit YP_308587.1 1340671 R 255470 CDS YP_308588.1 73749349 3623457 1342883..1343314 1 NC_007356.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1343314 mgsA 3623457 mgsA Dehalococcoides mccartyi CBDB1 methylglyoxal synthase YP_308588.1 1342883 D 255470 CDS YP_308589.1 73749350 3623458 1343502..1343711 1 NC_007356.1 hypothetical protein 1343711 3623458 cbdb_A1662 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308589.1 1343502 D 255470 CDS YP_308590.1 73749351 3623459 complement(1343819..1345195) 1 NC_007356.1 mechanosensitive ion channel MscS 1345195 3623459 cbdb_A1663 Dehalococcoides mccartyi CBDB1 mechanosensitive ion channel MscS YP_308590.1 1343819 R 255470 CDS YP_308591.1 73749352 3623460 complement(1345258..1345641) 1 NC_007356.1 TetR family transcriptional regulator 1345641 3623460 cbdb_A1664 Dehalococcoides mccartyi CBDB1 TetR family transcriptional regulator YP_308591.1 1345258 R 255470 CDS YP_308592.1 73749353 3623461 complement(1345710..1345847) 1 NC_007356.1 hypothetical protein 1345847 3623461 cbdb_A1665 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308592.1 1345710 R 255470 CDS YP_308593.1 73749354 3623462 complement(1345945..1346934) 1 NC_007356.1 dihydroflavonol 4-reductase 1346934 3623462 cbdb_A1667 Dehalococcoides mccartyi CBDB1 dihydroflavonol 4-reductase YP_308593.1 1345945 R 255470 CDS YP_308594.1 73749355 3623463 complement(1346938..1347924) 1 NC_007356.1 hypothetical protein 1347924 3623463 cbdb_A1668 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308594.1 1346938 R 255470 CDS YP_308595.1 73749356 3623464 1348375..1349016 1 NC_007356.1 antioxidant, AhpC 1349016 3623464 cbdb_A1669 Dehalococcoides mccartyi CBDB1 antioxidant, AhpC YP_308595.1 1348375 D 255470 CDS YP_308596.1 73749357 3623465 1349026..1349247 1 NC_007356.1 hypothetical protein 1349247 3623465 cbdb_A1670 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308596.1 1349026 D 255470 CDS YP_308597.1 73749358 3623466 1349582..1349839 1 NC_007356.1 hypothetical protein 1349839 3623466 cbdb_A1671 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308597.1 1349582 D 255470 CDS YP_308598.1 73749359 3623467 1350039..1350422 1 NC_007356.1 hypothetical protein 1350422 3623467 cbdb_A1673 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308598.1 1350039 D 255470 CDS YP_308599.1 73749360 3623189 1350464..1351030 1 NC_007356.1 hypothetical protein 1351030 3623189 cbdb_A1675 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308599.1 1350464 D 255470 CDS YP_308600.1 73749361 3623190 1351048..1352241 1 NC_007356.1 peptidase 1352241 3623190 cbdb_A1677 Dehalococcoides mccartyi CBDB1 peptidase YP_308600.1 1351048 D 255470 CDS YP_308601.1 73749362 3623167 complement(1352322..1353014) 1 NC_007356.1 serine O-acetyltransferase 1353014 cysE 3623167 cysE Dehalococcoides mccartyi CBDB1 serine O-acetyltransferase YP_308601.1 1352322 R 255470 CDS YP_308602.1 73749363 3623166 complement(1353042..1353386) 1 NC_007356.1 divalent cation tolerance protein CutA 1353386 cutA 3623166 cutA Dehalococcoides mccartyi CBDB1 divalent cation tolerance protein CutA YP_308602.1 1353042 R 255470 CDS YP_308603.1 73749364 3623765 complement(1353392..1354300) 1 NC_007356.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1354300 nadA 3623765 nadA Dehalococcoides mccartyi CBDB1 quinolinate synthetase YP_308603.1 1353392 R 255470 CDS YP_308604.1 73749365 3623191 complement(1354426..1355091) 1 NC_007356.1 SAM-dependent methyltransferase 1355091 3623191 cbdb_A1683 Dehalococcoides mccartyi CBDB1 SAM-dependent methyltransferase YP_308604.1 1354426 R 255470 CDS YP_308605.1 73749366 3623192 complement(1355088..1356161) 1 NC_007356.1 AIR synthase domain-containing protein 1356161 3623192 cbdb_A1684 Dehalococcoides mccartyi CBDB1 AIR synthase domain-containing protein YP_308605.1 1355088 R 255470 CDS YP_308606.1 73749367 3623082 complement(1356154..1356267) 1 NC_007356.1 hypothetical protein 1356267 3623082 cbdb_B44 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308606.1 1356154 R 255470 CDS YP_308607.1 73749368 3623193 complement(1356390..1356836) 1 NC_007356.1 transcriptional regulator 1356836 3623193 cbdb_A1685 Dehalococcoides mccartyi CBDB1 transcriptional regulator YP_308607.1 1356390 R 255470 CDS YP_308608.1 73749369 3623194 complement(1357007..1358068) 1 NC_007356.1 hypothetical protein 1358068 3623194 cbdb_A1686 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308608.1 1357007 R 255470 CDS YP_308609.1 73749370 3623195 complement(1358152..1359345) 1 NC_007356.1 membrane bound regulatory protein CprC 1359345 3623195 cbdb_A1688 Dehalococcoides mccartyi CBDB1 membrane bound regulatory protein CprC YP_308609.1 1358152 R 255470 CDS YP_308610.1 73749371 3623196 complement(1359537..1359659) 1 NC_007356.1 hypothetical protein 1359659 3623196 cbdb_A1689 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308610.1 1359537 R 255470 CDS YP_308611.1 73749372 3623197 complement(1359623..1360822) 1 NC_007356.1 membrane bound regulatory protein CprC 1360822 3623197 cbdb_A1690 Dehalococcoides mccartyi CBDB1 membrane bound regulatory protein CprC YP_308611.1 1359623 R 255470 CDS YP_308612.1 73749373 3622863 complement(1360943..1361731) 1 NC_007356.1 Sec-independent protein translocase TatC 1361731 tatC 3622863 tatC Dehalococcoides mccartyi CBDB1 Sec-independent protein translocase TatC YP_308612.1 1360943 R 255470 CDS YP_308613.1 73749374 3622862 complement(1361728..1362018) 1 NC_007356.1 twin-arginine translocation protein TatB 1362018 tatB 3622862 tatB Dehalococcoides mccartyi CBDB1 twin-arginine translocation protein TatB YP_308613.1 1361728 R 255470 CDS YP_308614.1 73749375 3622860 complement(1362095..1362331) 1 NC_007356.1 twin-arginine translocation protein TatA 1362331 tatA/E 3622860 tatA/E Dehalococcoides mccartyi CBDB1 twin-arginine translocation protein TatA YP_308614.1 1362095 R 255470 CDS YP_308615.1 73749376 3622861 complement(1362423..1362620) 1 NC_007356.1 twin-arginine translocation protein TatA 1362620 tatA/E 3622861 tatA/E Dehalococcoides mccartyi CBDB1 twin-arginine translocation protein TatA YP_308615.1 1362423 R 255470 CDS YP_308616.1 73749377 3622838 1362868..1363716 1 NC_007356.1 dihydropteroate synthase 1363716 folP 3622838 folP Dehalococcoides mccartyi CBDB1 dihydropteroate synthase YP_308616.1 1362868 D 255470 CDS YP_308617.1 73749378 3622837 1363707..1364237 1 NC_007356.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1364237 folK 3622837 folK Dehalococcoides mccartyi CBDB1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_308617.1 1363707 D 255470 CDS YP_308618.1 73749379 3623739 1364237..1364608 1 NC_007356.1 6-pyruvoyl tetrahydrobiopterin synthase 1364608 ptpS 3623739 ptpS Dehalococcoides mccartyi CBDB1 6-pyruvoyl tetrahydrobiopterin synthase YP_308618.1 1364237 D 255470 CDS YP_308619.1 73749380 3623403 1364732..1365745 1 NC_007356.1 recA protein 1365745 recA 3623403 recA Dehalococcoides mccartyi CBDB1 recA protein YP_308619.1 1364732 D 255470 CDS YP_308620.1 73749381 3623409 1365833..1366477 1 NC_007356.1 regulatory protein RecX 1366477 recX 3623409 recX Dehalococcoides mccartyi CBDB1 regulatory protein RecX YP_308620.1 1365833 D 255470 CDS YP_308621.1 73749382 3623199 1366546..1368129 1 NC_007356.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1368129 3623199 cbdb_A1702 Dehalococcoides mccartyi CBDB1 phosphodiesterase YP_308621.1 1366546 D 255470 CDS YP_308622.1 73749383 3623200 1368141..1368911 1 NC_007356.1 hypothetical protein 1368911 3623200 cbdb_A1703 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308622.1 1368141 D 255470 CDS YP_308623.1 73749384 3623201 1368914..1369777 1 NC_007356.1 phosphotransferase domain-containing protein 1369777 3623201 cbdb_A1704 Dehalococcoides mccartyi CBDB1 phosphotransferase domain-containing protein YP_308623.1 1368914 D 255470 CDS YP_308624.1 73749385 3623202 1369774..1370472 1 NC_007356.1 hypothetical protein 1370472 3623202 cbdb_A1705 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308624.1 1369774 D 255470 CDS YP_308625.1 73749386 3623203 complement(1370499..1371170) 1 NC_007356.1 HhH-GPD family DNA repair protein 1371170 3623203 cbdb_A1706 Dehalococcoides mccartyi CBDB1 HhH-GPD family DNA repair protein YP_308625.1 1370499 R 255470 CDS YP_308626.1 73749387 3623204 complement(1371152..1371595) 1 NC_007356.1 hypothetical protein 1371595 3623204 cbdb_A1707 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308626.1 1371152 R 255470 CDS YP_308627.1 73749388 3623205 complement(1371649..1372896) 1 NC_007356.1 homocitrate synthase 1372896 3623205 cbdb_A1708 Dehalococcoides mccartyi CBDB1 homocitrate synthase YP_308627.1 1371649 R 255470 CDS YP_308628.1 73749389 3623206 1373058..1373549 1 NC_007356.1 HIT domain-containing protein 1373549 3623206 cbdb_A1709 Dehalococcoides mccartyi CBDB1 HIT domain-containing protein YP_308628.1 1373058 D 255470 CDS YP_308629.1 73749390 3623207 1373696..1373968 1 NC_007356.1 AbrB family transcriptional regulator 1373968 3623207 cbdb_A1710 Dehalococcoides mccartyi CBDB1 AbrB family transcriptional regulator YP_308629.1 1373696 D 255470 CDS YP_308630.1 73749391 3623208 1373965..1374279 1 NC_007356.1 hypothetical protein 1374279 3623208 cbdb_A1711 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308630.1 1373965 D 255470 CDS YP_308631.1 73749392 3623052 1374298..1374489 1 NC_007356.1 hypothetical protein 1374489 3623052 cbdb_A1713 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308631.1 1374298 D 255470 CDS YP_308632.1 73749393 3623053 1374493..1375434 1 NC_007356.1 ABC transporter ATP-binding protein 1375434 3623053 cbdb_A1715 Dehalococcoides mccartyi CBDB1 ABC transporter ATP-binding protein YP_308632.1 1374493 D 255470 CDS YP_308633.1 73749394 3623054 1375431..1376192 1 NC_007356.1 ABC-transporter, permease component 1376192 3623054 cbdb_A1716 Dehalococcoides mccartyi CBDB1 ABC-transporter, permease component YP_308633.1 1375431 D 255470 CDS YP_308634.1 73749395 3623055 1376227..1377525 1 NC_007356.1 hypothetical protein 1377525 3623055 cbdb_A1717 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308634.1 1376227 D 255470 CDS YP_308635.1 73749396 3623056 1377620..1378063 1 NC_007356.1 hypothetical protein 1378063 3623056 cbdb_A1718 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308635.1 1377620 D 255470 CDS YP_308636.1 73749397 3623057 complement(1378230..1378397) 1 NC_007356.1 desulforedoxin 1378397 3623057 cbdb_A1720 Dehalococcoides mccartyi CBDB1 desulforedoxin YP_308636.1 1378230 R 255470 CDS YP_308637.1 73749398 3623058 complement(1378429..1378638) 1 NC_007356.1 hypothetical protein 1378638 3623058 cbdb_A1721 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308637.1 1378429 R 255470 CDS YP_308638.1 73749399 3623269 complement(1378885..1379910) 1 NC_007356.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1379910 argC 3623269 argC Dehalococcoides mccartyi CBDB1 N-acetyl-gamma-glutamyl-phosphate reductase YP_308638.1 1378885 R 255470 CDS YP_308639.1 73749400 3623059 complement(1379966..1381669) 1 NC_007356.1 sodium exchanger 1381669 3623059 cbdb_A1724 Dehalococcoides mccartyi CBDB1 sodium exchanger YP_308639.1 1379966 R 255470 CDS YP_308640.1 73749401 3623060 1381824..1382597 1 NC_007356.1 metallo-beta-lactamase 1382597 3623060 cbdb_A1725 Dehalococcoides mccartyi CBDB1 metallo-beta-lactamase YP_308640.1 1381824 D 255470 CDS YP_308641.1 73749402 3623061 1382652..1384484 1 NC_007356.1 radical SAM domain-containing protein 1384484 3623061 cbdb_A1727 Dehalococcoides mccartyi CBDB1 radical SAM domain-containing protein YP_308641.1 1382652 D 255470 CDS YP_308642.1 73749403 3623613 complement(1384559..1386988) 1 NC_007356.1 DNA gyrase subunit A 1386988 gyrA 3623613 gyrA Dehalococcoides mccartyi CBDB1 DNA gyrase subunit A YP_308642.1 1384559 R 255470 CDS YP_308643.1 73749404 3623062 complement(1386992..1387798) 1 NC_007356.1 hypothetical protein 1387798 3623062 cbdb_A1729 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308643.1 1386992 R 255470 CDS YP_308644.1 73749405 3623063 1388011..1388229 1 NC_007356.1 nifU protein,-like protein 1388229 3623063 cbdb_A1730 Dehalococcoides mccartyi CBDB1 nifU protein,-like protein YP_308644.1 1388011 D 255470 CDS YP_308645.1 73749406 3623749 complement(1388287..1389504) 1 NC_007356.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1389504 metL 3623749 metL Dehalococcoides mccartyi CBDB1 aspartate kinase YP_308645.1 1388287 R 255470 CDS YP_308646.1 73749407 3623064 complement(1389619..1389822) 1 NC_007356.1 hypothetical protein 1389822 3623064 cbdb_A1733 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308646.1 1389619 R 255470 CDS YP_308647.1 73749408 3623065 complement(1389846..1391027) 1 NC_007356.1 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 1391027 3623065 cbdb_A1734 Dehalococcoides mccartyi CBDB1 cofactor-independent phosphoglycerate mutase YP_308647.1 1389846 R 255470 CDS YP_308648.1 73749409 3623066 complement(1391189..1391974) 1 NC_007356.1 nucleotide pyrophosphohydrolase 1391974 3623066 cbdb_A1735 Dehalococcoides mccartyi CBDB1 nucleotide pyrophosphohydrolase YP_308648.1 1391189 R 255470 CDS YP_308649.1 73749410 3623069 complement(1392094..1392792) 1 NC_007356.1 hypothetical protein 1392792 3623069 cbdb_A1737 Dehalococcoides mccartyi CBDB1 hypothetical protein YP_308649.1 1392094 R 255470 CDS YP_308650.1 73749411 3623775 1392931..1393197 1 NC_007356.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1393197 rpsT 3623775 rpsT Dehalococcoides mccartyi CBDB1 30S ribosomal protein S20 YP_308650.1 1392931 D 255470 CDS YP_308651.1 73749412 3624005 1393298..1393942 1 NC_007356.1 LexA repressor 1393942 lexA 3624005 lexA Dehalococcoides mccartyi CBDB1 LexA repressor YP_308651.1 1393298 D 255470 CDS YP_308652.1 73749413 3624061 1393954..1394535 1 NC_007356.1 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase 1394535 3624061 cbdb_A1741 Dehalococcoides mccartyi CBDB1 L-fuculose phosphate aldolase YP_308652.1 1393954 D 255470 CDS YP_308653.1 73749414 3622833 complement(1394532..1395470) 1 NC_007356.1 methionyl-tRNA formyltransferase 1395470 fmt 3622833 fmt Dehalococcoides mccartyi CBDB1 methionyl-tRNA formyltransferase YP_308653.1 1394532 R 255470 CDS