-- dump date 20140619_055807 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 216389000001 SEQ_END SEQ_END NC_009455.1 1341892 1341892 DR NC_009455.1; contig end 1341892..1341892 Dehalococcoides mccartyi BAV1 YP_001213471.1 CDS DehaBAV1_0001 NC_009455.1 245 1579 D TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator, DnaA C-terminal domain; Chromosomal replication initiator, DnaA; SMART: AAA ATPase; chromosomal replication initiator protein DnaA 245..1579 Dehalococcoides mccartyi BAV1 5131182 YP_001213472.1 CDS obgE NC_009455.1 1910 3184 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1910..3184 Dehalococcoides mccartyi BAV1 5131201 YP_001213473.1 CDS DehaBAV1_0003 NC_009455.1 3172 3786 D TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate-nucleotide adenylyltransferase 3172..3786 Dehalococcoides mccartyi BAV1 5131739 YP_001213474.1 CDS DehaBAV1_0004 NC_009455.1 3868 5796 R TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B complement(3868..5796) Dehalococcoides mccartyi BAV1 5131176 YP_001213475.1 CDS DehaBAV1_0005 NC_009455.1 6001 8187 R TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA complement(6001..8187) Dehalococcoides mccartyi BAV1 5131613 YP_001213476.1 CDS hisS NC_009455.1 8315 9571 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 8315..9571 Dehalococcoides mccartyi BAV1 5131184 YP_001213477.1 CDS DehaBAV1_0007 NC_009455.1 9568 10731 D PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase 9568..10731 Dehalococcoides mccartyi BAV1 5131155 YP_001213478.1 CDS DehaBAV1_0008 NC_009455.1 10728 11330 R PFAM: protein of unknown function DUF205; membrane protein complement(10728..11330) Dehalococcoides mccartyi BAV1 5131726 YP_001213479.1 CDS DehaBAV1_0009 NC_009455.1 11384 12304 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(11384..12304) Dehalococcoides mccartyi BAV1 5131603 YP_001213480.1 CDS DehaBAV1_0010 NC_009455.1 12458 13630 R PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(12458..13630) Dehalococcoides mccartyi BAV1 5131175 YP_001213481.1 CDS DehaBAV1_0011 NC_009455.1 13630 13818 R PFAM: protein of unknown function DUF951; hypothetical protein complement(13630..13818) Dehalococcoides mccartyi BAV1 5131647 YP_001213482.1 CDS DehaBAV1_0012 NC_009455.1 13889 14701 R TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(13889..14701) Dehalococcoides mccartyi BAV1 5131616 YP_001213483.1 CDS DehaBAV1_0013 NC_009455.1 14849 15544 D hypothetical protein 14849..15544 Dehalococcoides mccartyi BAV1 5131634 YP_001213484.1 CDS DehaBAV1_0014 NC_009455.1 15583 16377 D hypothetical protein 15583..16377 Dehalococcoides mccartyi BAV1 5132247 YP_001213485.1 CDS DehaBAV1_0015 NC_009455.1 16423 17739 D TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 16423..17739 Dehalococcoides mccartyi BAV1 5132407 YP_001213486.1 CDS DehaBAV1_0016 NC_009455.1 17722 17937 R hypothetical protein complement(17722..17937) Dehalococcoides mccartyi BAV1 5132115 YP_001213487.1 CDS DehaBAV1_0017 NC_009455.1 17951 18214 R hypothetical protein complement(17951..18214) Dehalococcoides mccartyi BAV1 5132088 YP_001213488.1 CDS DehaBAV1_0018 NC_009455.1 18517 18978 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 18517..18978 Dehalococcoides mccartyi BAV1 5132411 YP_001213489.1 CDS DehaBAV1_0019 NC_009455.1 19030 19458 D PFAM: ferric-uptake regulator; ferric uptake regulator family protein 19030..19458 Dehalococcoides mccartyi BAV1 5131342 YP_001213490.1 CDS DehaBAV1_0020 NC_009455.1 19849 20601 R hypothetical protein complement(19849..20601) Dehalococcoides mccartyi BAV1 5132434 YP_001213491.1 CDS DehaBAV1_0021 NC_009455.1 20704 21090 D hypothetical protein 20704..21090 Dehalococcoides mccartyi BAV1 5132413 YP_001213492.1 CDS DehaBAV1_0022 NC_009455.1 21172 21312 R hypothetical protein complement(21172..21312) Dehalococcoides mccartyi BAV1 5132256 YP_001213493.1 CDS DehaBAV1_0023 NC_009455.1 21369 23759 R TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 complement(21369..23759) Dehalococcoides mccartyi BAV1 5132410 YP_001213494.1 CDS DehaBAV1_0024 NC_009455.1 23756 24256 R DNA uptake protein and related DNA-binding protein-like protein complement(23756..24256) Dehalococcoides mccartyi BAV1 5132409 YP_001213495.1 CDS DehaBAV1_0025 NC_009455.1 24434 25099 R PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein complement(24434..25099) Dehalococcoides mccartyi BAV1 5132395 YP_001213496.1 CDS DehaBAV1_0026 NC_009455.1 25104 25508 R PFAM: TrkA-N domain protein; TrkA domain-containing protein complement(25104..25508) Dehalococcoides mccartyi BAV1 5132428 YP_001213497.1 CDS DehaBAV1_0027 NC_009455.1 25512 25940 R PFAM: UspA domain protein; UspA domain-containing protein complement(25512..25940) Dehalococcoides mccartyi BAV1 5132222 YP_001213498.1 CDS DehaBAV1_0028 NC_009455.1 26017 27462 R PFAM: cation transporter; cation transporter complement(26017..27462) Dehalococcoides mccartyi BAV1 5132385 YP_001213499.1 CDS trkA NC_009455.1 27466 28830 R involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein complement(27466..28830) Dehalococcoides mccartyi BAV1 5131227 YP_001213500.1 CDS DehaBAV1_0030 NC_009455.1 29308 29937 D PFAM: protein of unknown function DUF47; hypothetical protein 29308..29937 Dehalococcoides mccartyi BAV1 5132426 YP_001213501.1 CDS DehaBAV1_0031 NC_009455.1 29930 30931 D PFAM: phosphate transporter; phosphate transporter 29930..30931 Dehalococcoides mccartyi BAV1 5132398 YP_001213502.1 CDS gmk NC_009455.1 30928 31545 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(30928..31545) Dehalococcoides mccartyi BAV1 5132357 YP_001213503.1 CDS DehaBAV1_0033 NC_009455.1 31526 31816 R PFAM: protein of unknown function DUF370; hypothetical protein complement(31526..31816) Dehalococcoides mccartyi BAV1 5131172 YP_001213504.1 CDS DehaBAV1_0034 NC_009455.1 32025 32873 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin-NADP(+) reductase subunit alpha 32025..32873 Dehalococcoides mccartyi BAV1 5131171 YP_001213505.1 CDS DehaBAV1_0035 NC_009455.1 32866 34263 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 32866..34263 Dehalococcoides mccartyi BAV1 5131169 YP_001213506.1 CDS DehaBAV1_0036 NC_009455.1 34260 34466 R hypothetical protein complement(34260..34466) Dehalococcoides mccartyi BAV1 5131166 YP_001213507.1 CDS DehaBAV1_0037 NC_009455.1 34582 35115 R hypothetical protein complement(34582..35115) Dehalococcoides mccartyi BAV1 5131165 YP_001213508.1 CDS DehaBAV1_0038 NC_009455.1 35186 35794 R PFAM: Methyltransferase type 11; methyltransferase type 11 complement(35186..35794) Dehalococcoides mccartyi BAV1 5131162 YP_001213509.1 CDS DehaBAV1_0039 NC_009455.1 35805 35999 R hypothetical protein complement(35805..35999) Dehalococcoides mccartyi BAV1 5131163 YP_001213510.1 CDS DehaBAV1_0040 NC_009455.1 36141 36512 D PFAM: protein of unknown function DUF1025; hypothetical protein 36141..36512 Dehalococcoides mccartyi BAV1 5131854 YP_001213511.1 CDS DehaBAV1_0041 NC_009455.1 36648 37094 D TIGRFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 36648..37094 Dehalococcoides mccartyi BAV1 5131875 YP_001213512.1 CDS DehaBAV1_0042 NC_009455.1 37091 38194 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(37091..38194) Dehalococcoides mccartyi BAV1 5131853 YP_001213513.1 CDS DehaBAV1_0043 NC_009455.1 38216 38458 R hypothetical protein complement(38216..38458) Dehalococcoides mccartyi BAV1 5131872 YP_001213514.1 CDS DehaBAV1_0044 NC_009455.1 38586 39614 D TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 38586..39614 Dehalococcoides mccartyi BAV1 5131871 YP_001213515.1 CDS DehaBAV1_0045 NC_009455.1 39616 40227 D hypothetical protein 39616..40227 Dehalococcoides mccartyi BAV1 5131848 YP_001213516.1 CDS DehaBAV1_0046 NC_009455.1 40262 41269 D PFAM: ROK family protein; glucokinase 40262..41269 Dehalococcoides mccartyi BAV1 5131879 YP_001213517.1 CDS alaS NC_009455.1 41385 44000 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 41385..44000 Dehalococcoides mccartyi BAV1 5131843 YP_001213518.1 CDS DehaBAV1_0048 NC_009455.1 44047 44448 D PFAM: Holliday junction resolvase YqgF; SMART: Resolvase, RNase H domain protein fold; Holliday junction resolvase YqgF 44047..44448 Dehalococcoides mccartyi BAV1 5131866 YP_001213519.1 CDS tgt NC_009455.1 44470 45648 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 44470..45648 Dehalococcoides mccartyi BAV1 5131803 YP_001213520.1 CDS DehaBAV1_0050 NC_009455.1 45743 46885 D PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 45743..46885 Dehalococcoides mccartyi BAV1 5131800 YP_001213521.1 CDS DehaBAV1_0051 NC_009455.1 50498 52972 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 50498..52972 Dehalococcoides mccartyi BAV1 5132170 YP_001213522.1 CDS DehaBAV1_0052 NC_009455.1 53418 54812 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 53418..54812 Dehalococcoides mccartyi BAV1 5131818 YP_001213523.1 CDS ispD NC_009455.1 54799 55482 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 54799..55482 Dehalococcoides mccartyi BAV1 5131809 YP_001213524.1 CDS ispF NC_009455.1 55488 55961 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 55488..55961 Dehalococcoides mccartyi BAV1 5131815 YP_001213525.1 CDS cysS NC_009455.1 55965 57338 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 55965..57338 Dehalococcoides mccartyi BAV1 5131829 YP_001213526.1 CDS DehaBAV1_0056 NC_009455.1 57557 58555 D PFAM: phage integrase family protein; phage integrase family protein 57557..58555 Dehalococcoides mccartyi BAV1 5132001 YP_001213527.1 CDS DehaBAV1_0057 NC_009455.1 58582 59448 R hypothetical protein complement(58582..59448) Dehalococcoides mccartyi BAV1 5131817 YP_001213528.1 CDS DehaBAV1_0058 NC_009455.1 59840 60553 R hypothetical protein complement(59840..60553) Dehalococcoides mccartyi BAV1 5131804 YP_001213529.1 CDS DehaBAV1_0059 NC_009455.1 60568 60753 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(60568..60753) Dehalococcoides mccartyi BAV1 5131813 YP_001213530.1 CDS DehaBAV1_0060 NC_009455.1 60861 61205 D hypothetical protein 60861..61205 Dehalococcoides mccartyi BAV1 5131827 YP_001213531.1 CDS DehaBAV1_0061 NC_009455.1 61286 66757 R PFAM: metallophosphoesterase; metallophosphoesterase complement(61286..66757) Dehalococcoides mccartyi BAV1 5131833 YP_001213532.1 CDS DehaBAV1_0062 NC_009455.1 67261 68091 R hypothetical protein complement(67261..68091) Dehalococcoides mccartyi BAV1 5131820 YP_001213533.1 CDS DehaBAV1_0063 NC_009455.1 68088 68522 R hypothetical protein complement(68088..68522) Dehalococcoides mccartyi BAV1 5131824 YP_001213534.1 CDS DehaBAV1_0064 NC_009455.1 68535 68987 R hypothetical protein complement(68535..68987) Dehalococcoides mccartyi BAV1 5131840 YP_001213535.1 CDS DehaBAV1_0065 NC_009455.1 68993 69451 R hypothetical protein complement(68993..69451) Dehalococcoides mccartyi BAV1 5131796 YP_001213536.1 CDS DehaBAV1_0066 NC_009455.1 69766 70215 R hypothetical protein complement(69766..70215) Dehalococcoides mccartyi BAV1 5131805 YP_001213537.1 CDS DehaBAV1_0067 NC_009455.1 70367 70630 D hypothetical protein 70367..70630 Dehalococcoides mccartyi BAV1 5131776 YP_001213538.1 CDS DehaBAV1_0068 NC_009455.1 70591 71598 D hypothetical protein 70591..71598 Dehalococcoides mccartyi BAV1 5131786 YP_001213539.1 CDS DehaBAV1_0069 NC_009455.1 71595 73340 D hypothetical protein 71595..73340 Dehalococcoides mccartyi BAV1 5131808 YP_001213540.1 CDS DehaBAV1_0070 NC_009455.1 73340 73684 D hypothetical protein 73340..73684 Dehalococcoides mccartyi BAV1 5131831 YP_001213541.1 CDS DehaBAV1_0071 NC_009455.1 74225 74767 R hypothetical protein complement(74225..74767) Dehalococcoides mccartyi BAV1 5131822 YP_001213542.1 CDS DehaBAV1_0072 NC_009455.1 75294 75611 R hypothetical protein complement(75294..75611) Dehalococcoides mccartyi BAV1 5131816 YP_001213543.1 CDS DehaBAV1_0073 NC_009455.1 75785 76420 R PFAM: Resolvase, N-terminal domain; resolvase domain-containing protein complement(75785..76420) Dehalococcoides mccartyi BAV1 5131868 YP_001213544.1 CDS DehaBAV1_0074 NC_009455.1 76799 79402 R hypothetical protein complement(76799..79402) Dehalococcoides mccartyi BAV1 5131865 YP_001213545.1 CDS DehaBAV1_0075 NC_009455.1 79846 80181 R hypothetical protein complement(79846..80181) Dehalococcoides mccartyi BAV1 5131857 YP_001213546.1 CDS DehaBAV1_0076 NC_009455.1 80178 80450 R hypothetical protein complement(80178..80450) Dehalococcoides mccartyi BAV1 5131849 YP_001213547.1 CDS DehaBAV1_0077 NC_009455.1 81298 81921 D PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; phage repressor like transcriptional regulator 81298..81921 Dehalococcoides mccartyi BAV1 5131845 YP_001213548.1 CDS DehaBAV1_0078 NC_009455.1 82056 83015 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; phage integrase family protein 82056..83015 Dehalococcoides mccartyi BAV1 5131832 YP_001213549.1 CDS DehaBAV1_0079 NC_009455.1 83602 84609 R TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(83602..84609) Dehalococcoides mccartyi BAV1 5131142 YP_001213550.1 CDS DehaBAV1_0080 NC_009455.1 84613 85461 R type II site-specific deoxyribonuclease complement(84613..85461) Dehalococcoides mccartyi BAV1 5131146 YP_001213551.1 CDS DehaBAV1_0082 NC_009455.1 85925 86209 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 85925..86209 Dehalococcoides mccartyi BAV1 5132050 YP_001213552.1 CDS DehaBAV1_0083 NC_009455.1 86347 87135 D PFAM: Integrase, catalytic region; integrase catalytic subunit 86347..87135 Dehalococcoides mccartyi BAV1 5131177 YP_001213553.1 CDS DehaBAV1_0084 NC_009455.1 87298 88449 R hypothetical protein complement(87298..88449) Dehalococcoides mccartyi BAV1 5131769 YP_001213554.1 CDS DehaBAV1_0085 NC_009455.1 89033 89578 R hypothetical protein complement(89033..89578) Dehalococcoides mccartyi BAV1 5131782 YP_001213555.1 CDS DehaBAV1_0086 NC_009455.1 89582 89908 R hypothetical protein complement(89582..89908) Dehalococcoides mccartyi BAV1 5131109 YP_001213556.1 CDS DehaBAV1_0087 NC_009455.1 89909 90487 R hypothetical protein complement(89909..90487) Dehalococcoides mccartyi BAV1 5131108 YP_001213557.1 CDS DehaBAV1_0088 NC_009455.1 91006 92598 R hypothetical protein complement(91006..92598) Dehalococcoides mccartyi BAV1 5131107 YP_001213558.1 CDS DehaBAV1_0089 NC_009455.1 92675 93010 R hypothetical protein complement(92675..93010) Dehalococcoides mccartyi BAV1 5131787 YP_001213559.1 CDS DehaBAV1_0090 NC_009455.1 93066 93458 R PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein/primosomal replication protein n complement(93066..93458) Dehalococcoides mccartyi BAV1 5131768 YP_001213560.1 CDS DehaBAV1_0091 NC_009455.1 93499 93825 R hypothetical protein complement(93499..93825) Dehalococcoides mccartyi BAV1 5131779 YP_001213561.1 CDS DehaBAV1_0092 NC_009455.1 93922 94554 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 93922..94554 Dehalococcoides mccartyi BAV1 5131181 YP_001213562.1 CDS DehaBAV1_0093 NC_009455.1 94704 95195 D hypothetical protein 94704..95195 Dehalococcoides mccartyi BAV1 5131111 YP_001213563.1 CDS DehaBAV1_0094 NC_009455.1 95226 96302 D hypothetical protein 95226..96302 Dehalococcoides mccartyi BAV1 5131123 YP_001213564.1 CDS DehaBAV1_0095 NC_009455.1 96364 97416 D hypothetical protein 96364..97416 Dehalococcoides mccartyi BAV1 5131611 YP_001213565.1 CDS DehaBAV1_0096 NC_009455.1 97959 98744 R hypothetical protein complement(97959..98744) Dehalococcoides mccartyi BAV1 5131652 YP_001213566.1 CDS DehaBAV1_0097 NC_009455.1 98940 99575 R PFAM: Resolvase, N-terminal domain; resolvase domain-containing protein complement(98940..99575) Dehalococcoides mccartyi BAV1 5131633 YP_001213567.1 CDS DehaBAV1_0098 NC_009455.1 99572 100531 R hypothetical protein complement(99572..100531) Dehalococcoides mccartyi BAV1 5132380 YP_001213568.1 CDS DehaBAV1_0099 NC_009455.1 100651 100776 D hypothetical protein 100651..100776 Dehalococcoides mccartyi BAV1 5131641 YP_001213569.1 CDS DehaBAV1_0100 NC_009455.1 100821 101420 R hypothetical protein complement(100821..101420) Dehalococcoides mccartyi BAV1 5131650 YP_001213570.1 CDS DehaBAV1_0101 NC_009455.1 101503 101718 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 101503..101718 Dehalococcoides mccartyi BAV1 5131697 YP_001213571.1 CDS DehaBAV1_0102 NC_009455.1 102397 103161 R PFAM: protein of unknown function DUF105; hypothetical protein complement(102397..103161) Dehalococcoides mccartyi BAV1 5131684 YP_001213572.1 CDS DehaBAV1_0103 NC_009455.1 103248 103544 R hypothetical protein complement(103248..103544) Dehalococcoides mccartyi BAV1 5131564 YP_001213573.1 CDS DehaBAV1_0104 NC_009455.1 103582 105129 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(103582..105129) Dehalococcoides mccartyi BAV1 5131704 YP_001213574.1 CDS DehaBAV1_0105 NC_009455.1 105240 106106 R TIGRFAM: putative ATP binding protein; PFAM: protein of unknown function DUF71, ATP-binding region; putative ATP binding protein complement(105240..106106) Dehalococcoides mccartyi BAV1 5131584 YP_001213575.1 CDS DehaBAV1_0106 NC_009455.1 106418 107101 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(106418..107101) Dehalococcoides mccartyi BAV1 5131710 YP_001213576.1 CDS DehaBAV1_0107 NC_009455.1 107082 108308 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(107082..108308) Dehalococcoides mccartyi BAV1 5131708 YP_001213577.1 CDS DehaBAV1_0108 NC_009455.1 108405 109889 R PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(108405..109889) Dehalococcoides mccartyi BAV1 5131487 YP_001213578.1 CDS DehaBAV1_0109 NC_009455.1 109912 110661 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(109912..110661) Dehalococcoides mccartyi BAV1 5131588 YP_001213579.1 CDS DehaBAV1_0110 NC_009455.1 110658 111404 R TIGRFAM: putative ATP binding protein; PFAM: protein of unknown function DUF71, ATP-binding region; putative ATP binding protein complement(110658..111404) Dehalococcoides mccartyi BAV1 5131466 YP_001213580.1 CDS DehaBAV1_0111 NC_009455.1 111488 111757 R hypothetical protein complement(111488..111757) Dehalococcoides mccartyi BAV1 5131560 YP_001213581.1 CDS DehaBAV1_0112 NC_009455.1 111779 113299 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(111779..113299) Dehalococcoides mccartyi BAV1 5132438 YP_001213582.1 CDS DehaBAV1_0113 NC_009455.1 113374 113997 R PFAM: protein of unknown function UPF0153; hypothetical protein complement(113374..113997) Dehalococcoides mccartyi BAV1 5131429 YP_001213583.1 CDS DehaBAV1_0114 NC_009455.1 114086 114973 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 114086..114973 Dehalococcoides mccartyi BAV1 5131439 YP_001213584.1 CDS DehaBAV1_0115 NC_009455.1 114986 115681 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(114986..115681) Dehalococcoides mccartyi BAV1 5131425 YP_001213585.1 CDS DehaBAV1_0116 NC_009455.1 115822 116100 R PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(115822..116100) Dehalococcoides mccartyi BAV1 5131415 YP_001213586.1 CDS DehaBAV1_0117 NC_009455.1 116258 116575 D hypothetical protein 116258..116575 Dehalococcoides mccartyi BAV1 5131409 YP_001213587.1 CDS DehaBAV1_0118 NC_009455.1 116611 116883 D hypothetical protein 116611..116883 Dehalococcoides mccartyi BAV1 5131393 YP_001213588.1 CDS DehaBAV1_0119 NC_009455.1 117096 118538 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(117096..118538) Dehalococcoides mccartyi BAV1 5131444 YP_001213589.1 CDS DehaBAV1_0120 NC_009455.1 118864 119136 R hypothetical protein complement(118864..119136) Dehalococcoides mccartyi BAV1 5131421 YP_001213590.1 CDS DehaBAV1_0121 NC_009455.1 119160 120704 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(119160..120704) Dehalococcoides mccartyi BAV1 5131472 YP_001213591.1 CDS DehaBAV1_0122 NC_009455.1 120715 120942 R hypothetical protein complement(120715..120942) Dehalococcoides mccartyi BAV1 5131502 YP_001213592.1 CDS DehaBAV1_0123 NC_009455.1 120969 122270 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 120969..122270 Dehalococcoides mccartyi BAV1 5131483 YP_001213593.1 CDS DehaBAV1_0124 NC_009455.1 122267 122944 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 122267..122944 Dehalococcoides mccartyi BAV1 5131486 YP_001213594.1 CDS DehaBAV1_0125 NC_009455.1 123332 123655 D PFAM: TM2 domain containing protein+B7201; TM2 domain-containing protein 123332..123655 Dehalococcoides mccartyi BAV1 5132427 YP_001213595.1 CDS DehaBAV1_0126 NC_009455.1 123743 124000 D hypothetical protein 123743..124000 Dehalococcoides mccartyi BAV1 5131459 YP_001213596.1 CDS DehaBAV1_0127 NC_009455.1 124013 124354 D hypothetical protein 124013..124354 Dehalococcoides mccartyi BAV1 5131490 YP_001213597.1 CDS DehaBAV1_0128 NC_009455.1 124563 125747 D PFAM: HI0933 family protein; hypothetical protein 124563..125747 Dehalococcoides mccartyi BAV1 5131492 YP_001213598.1 CDS DehaBAV1_0129 NC_009455.1 125873 126727 D hypothetical protein 125873..126727 Dehalococcoides mccartyi BAV1 5131495 YP_001213599.1 CDS DehaBAV1_0130 NC_009455.1 126795 128852 D PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; ABC transporter 126795..128852 Dehalococcoides mccartyi BAV1 5131500 YP_001213600.1 CDS DehaBAV1_0131 NC_009455.1 128849 129427 R PFAM: Hly-III family protein; Hly-III family protein complement(128849..129427) Dehalococcoides mccartyi BAV1 5131446 YP_001213601.1 CDS DehaBAV1_0132 NC_009455.1 129622 130902 D PFAM: proteinase inhibitor I4, serpin; proteinase inhibitor I4, serpin 129622..130902 Dehalococcoides mccartyi BAV1 5131460 YP_001213602.1 CDS DehaBAV1_0133 NC_009455.1 130984 133176 R TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: GCN5-related N-acetyltransferase; Radical SAM domain protein; L-lysine 2,3-aminomutase complement(130984..133176) Dehalococcoides mccartyi BAV1 5131440 YP_001213603.1 CDS DehaBAV1_0134 NC_009455.1 133630 134124 R hypothetical protein complement(133630..134124) Dehalococcoides mccartyi BAV1 5131733 YP_001213604.1 CDS DehaBAV1_0135 NC_009455.1 134276 134629 D PFAM: protein of unknown function DUF134; Sigma-70, region 4 type 2; hypothetical protein 134276..134629 Dehalococcoides mccartyi BAV1 5131731 YP_001213605.1 CDS DehaBAV1_0136 NC_009455.1 134626 135600 R PFAM: aldo/keto reductase; aldo/keto reductase complement(134626..135600) Dehalococcoides mccartyi BAV1 5131716 YP_001213606.1 CDS DehaBAV1_0137 NC_009455.1 135870 136667 R PFAM: LmbE family protein; LmbE family protein complement(135870..136667) Dehalococcoides mccartyi BAV1 5131737 YP_001213607.1 CDS DehaBAV1_0138 NC_009455.1 136845 138170 D PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 136845..138170 Dehalococcoides mccartyi BAV1 5131505 YP_001213608.1 CDS DehaBAV1_0139 NC_009455.1 138170 139456 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; coenzyme F420 hydrogenase/dehydrogenase subunit beta 138170..139456 Dehalococcoides mccartyi BAV1 5131501 YP_001213609.1 CDS DehaBAV1_0140 NC_009455.1 139431 140723 R hypothetical protein complement(139431..140723) Dehalococcoides mccartyi BAV1 5131728 YP_001213610.1 CDS DehaBAV1_0141 NC_009455.1 140704 141405 R PFAM: Methyltransferase type 11; Methyltransferase type 12; methyltransferase type 11 complement(140704..141405) Dehalococcoides mccartyi BAV1 5131723 YP_001213611.1 CDS DehaBAV1_0142 NC_009455.1 141402 142616 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(141402..142616) Dehalococcoides mccartyi BAV1 5131498 YP_001213612.1 CDS DehaBAV1_0143 NC_009455.1 142616 143470 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(142616..143470) Dehalococcoides mccartyi BAV1 5132443 YP_001213613.1 CDS DehaBAV1_0144 NC_009455.1 143472 145091 R hypothetical protein complement(143472..145091) Dehalococcoides mccartyi BAV1 5132275 YP_001213614.1 CDS DehaBAV1_0145 NC_009455.1 145088 146011 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(145088..146011) Dehalococcoides mccartyi BAV1 5132283 YP_001213615.1 CDS DehaBAV1_0146 NC_009455.1 146027 146677 R PFAM: sugar isomerase (SIS); sugar isomerase (SIS) complement(146027..146677) Dehalococcoides mccartyi BAV1 5132284 YP_001213616.1 CDS DehaBAV1_0147 NC_009455.1 146706 147683 R PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; GHMP kinase complement(146706..147683) Dehalococcoides mccartyi BAV1 5132302 YP_001213617.1 CDS DehaBAV1_0148 NC_009455.1 147680 148390 R PFAM: Nucleotidyl transferase; nucleotidyl transferase complement(147680..148390) Dehalococcoides mccartyi BAV1 5131408 YP_001213618.1 CDS DehaBAV1_0149 NC_009455.1 148393 149334 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(148393..149334) Dehalococcoides mccartyi BAV1 5131442 YP_001213619.1 CDS DehaBAV1_0150 NC_009455.1 149327 150322 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(149327..150322) Dehalococcoides mccartyi BAV1 5131729 YP_001213620.1 CDS DehaBAV1_0151 NC_009455.1 150315 151547 R TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: glycosyl transferase, family 2; Polynucleotide kinase 3 phosphatase, central region; histidinol-phosphate phosphatase family protein complement(150315..151547) Dehalococcoides mccartyi BAV1 5131746 YP_001213621.1 CDS DehaBAV1_0152 NC_009455.1 151751 152758 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 151751..152758 Dehalococcoides mccartyi BAV1 5131703 YP_001213622.1 CDS DehaBAV1_0153 NC_009455.1 152771 153682 R PFAM: Protein of unknown function DUF1616; hypothetical protein complement(152771..153682) Dehalococcoides mccartyi BAV1 5131736 YP_001213623.1 CDS DehaBAV1_0154 NC_009455.1 153774 154277 R PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(153774..154277) Dehalococcoides mccartyi BAV1 5131623 YP_001213624.1 CDS DehaBAV1_0155 NC_009455.1 154274 154549 R PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain; glutaredoxin complement(154274..154549) Dehalococcoides mccartyi BAV1 5132042 YP_001213625.1 CDS DehaBAV1_0156 NC_009455.1 154740 155126 R hypothetical protein complement(154740..155126) Dehalococcoides mccartyi BAV1 5131402 YP_001213626.1 CDS DehaBAV1_0157 NC_009455.1 155284 155814 R PFAM: protein of unknown function UPF0157; hypothetical protein complement(155284..155814) Dehalococcoides mccartyi BAV1 5131410 YP_001213627.1 CDS DehaBAV1_0158 NC_009455.1 155818 157125 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein complement(155818..157125) Dehalococcoides mccartyi BAV1 5131432 YP_001213628.1 CDS DehaBAV1_0159 NC_009455.1 157300 159741 D TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 157300..159741 Dehalococcoides mccartyi BAV1 5132037 YP_001213629.1 CDS DehaBAV1_0160 NC_009455.1 159743 160546 D TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 159743..160546 Dehalococcoides mccartyi BAV1 5132291 YP_001213630.1 CDS DehaBAV1_0161 NC_009455.1 160640 161128 D PFAM: Colicin V production protein; colicin V production protein 160640..161128 Dehalococcoides mccartyi BAV1 5132234 YP_001213631.1 CDS DehaBAV1_0162 NC_009455.1 161239 161493 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(161239..161493) Dehalococcoides mccartyi BAV1 5132397 YP_001213632.1 CDS coaD NC_009455.1 161582 162061 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(161582..162061) Dehalococcoides mccartyi BAV1 5132277 YP_001213633.1 CDS DehaBAV1_0164 NC_009455.1 162033 162611 R TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; putative methyltransferase complement(162033..162611) Dehalococcoides mccartyi BAV1 5132320 YP_001213634.1 CDS DehaBAV1_0165 NC_009455.1 162990 165971 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; formate dehydrogenase alpha subunit 162990..165971 Dehalococcoides mccartyi BAV1 5131575 YP_001213635.1 CDS DehaBAV1_0166 NC_009455.1 166059 167270 D PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD 166059..167270 Dehalococcoides mccartyi BAV1 5131481 YP_001213636.1 CDS DehaBAV1_0167 NC_009455.1 167271 168119 D hypothetical protein 167271..168119 Dehalococcoides mccartyi BAV1 5131537 YP_001213637.1 CDS DehaBAV1_0168 NC_009455.1 168301 169266 R PFAM: Integral membrane protein TerC; integral membrane protein TerC complement(168301..169266) Dehalococcoides mccartyi BAV1 5131567 YP_001213638.1 CDS DehaBAV1_0169 NC_009455.1 169433 171118 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase complement(169433..171118) Dehalococcoides mccartyi BAV1 5131494 YP_001213639.1 CDS DehaBAV1_0170 NC_009455.1 171591 172550 D PFAM: Integrase, catalytic region; integrase catalytic subunit 171591..172550 Dehalococcoides mccartyi BAV1 5131493 YP_001213640.1 CDS DehaBAV1_0171 NC_009455.1 172547 172819 D hypothetical protein 172547..172819 Dehalococcoides mccartyi BAV1 5131563 YP_001213641.1 CDS DehaBAV1_0172 NC_009455.1 173038 173325 R hypothetical protein complement(173038..173325) Dehalococcoides mccartyi BAV1 5132322 YP_001213642.1 CDS DehaBAV1_0173 NC_009455.1 173374 174741 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(173374..174741) Dehalococcoides mccartyi BAV1 5132211 YP_001213643.1 CDS DehaBAV1_0174 NC_009455.1 174984 175583 D hypothetical protein 174984..175583 Dehalococcoides mccartyi BAV1 5132308 YP_001213644.1 CDS DehaBAV1_0175 NC_009455.1 175567 177360 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; histidine kinase 175567..177360 Dehalococcoides mccartyi BAV1 5131079 YP_001213645.1 CDS DehaBAV1_0176 NC_009455.1 177341 178021 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 177341..178021 Dehalococcoides mccartyi BAV1 5132091 YP_001213646.1 CDS DehaBAV1_0177 NC_009455.1 178952 179650 R hypothetical protein complement(178952..179650) Dehalococcoides mccartyi BAV1 5132076 YP_001213647.1 CDS DehaBAV1_0178 NC_009455.1 179904 181679 R hypothetical protein complement(179904..181679) Dehalococcoides mccartyi BAV1 5132075 YP_001213648.1 CDS DehaBAV1_0179 NC_009455.1 181715 182533 R hypothetical protein complement(181715..182533) Dehalococcoides mccartyi BAV1 5132161 YP_001213649.1 CDS DehaBAV1_0180 NC_009455.1 182628 183593 R hypothetical protein complement(182628..183593) Dehalococcoides mccartyi BAV1 5132156 YP_001213650.1 CDS DehaBAV1_0181 NC_009455.1 183577 184734 R hypothetical protein complement(183577..184734) Dehalococcoides mccartyi BAV1 5132160 YP_001213651.1 CDS DehaBAV1_0182 NC_009455.1 184727 187846 R hypothetical protein complement(184727..187846) Dehalococcoides mccartyi BAV1 5132068 YP_001213652.1 CDS DehaBAV1_0183 NC_009455.1 187849 191217 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; helicase domain-containing protein complement(187849..191217) Dehalococcoides mccartyi BAV1 5132422 YP_001213653.1 CDS DehaBAV1_0185 NC_009455.1 191603 192088 R hypothetical protein complement(191603..192088) Dehalococcoides mccartyi BAV1 5132314 YP_001213654.1 CDS DehaBAV1_0186 NC_009455.1 192130 192447 R hypothetical protein complement(192130..192447) Dehalococcoides mccartyi BAV1 5132105 YP_001213655.1 CDS DehaBAV1_0187 NC_009455.1 192501 192983 R hypothetical protein complement(192501..192983) Dehalococcoides mccartyi BAV1 5132213 YP_001213656.1 CDS DehaBAV1_0188 NC_009455.1 193972 195231 R PFAM: DNA polymerase III, beta chain; DNA polymerase III beta subunit family protein complement(193972..195231) Dehalococcoides mccartyi BAV1 5132387 YP_001213657.1 CDS DehaBAV1_0189 NC_009455.1 195367 195978 R hypothetical protein complement(195367..195978) Dehalococcoides mccartyi BAV1 5132215 YP_001213658.1 CDS DehaBAV1_0190 NC_009455.1 196354 197508 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 196354..197508 Dehalococcoides mccartyi BAV1 5132221 YP_001213659.1 CDS DehaBAV1_0191 NC_009455.1 197565 199514 D hypothetical protein 197565..199514 Dehalococcoides mccartyi BAV1 5131738 YP_001213660.1 CDS DehaBAV1_0192 NC_009455.1 199571 201061 D hypothetical protein 199571..201061 Dehalococcoides mccartyi BAV1 5132242 YP_001213661.1 CDS DehaBAV1_0193 NC_009455.1 201126 201662 R hypothetical protein complement(201126..201662) Dehalococcoides mccartyi BAV1 5132208 YP_001213662.1 CDS DehaBAV1_0194 NC_009455.1 201666 203210 R PFAM: protein of unknown function DUF192; hypothetical protein complement(201666..203210) Dehalococcoides mccartyi BAV1 5132235 YP_001213663.1 CDS DehaBAV1_0195 NC_009455.1 203508 204203 R PFAM: phage integrase family protein; phage integrase family protein complement(203508..204203) Dehalococcoides mccartyi BAV1 5132241 YP_001213664.1 CDS DehaBAV1_0196 NC_009455.1 204203 204676 R hypothetical protein complement(204203..204676) Dehalococcoides mccartyi BAV1 5132205 YP_001213665.1 CDS DehaBAV1_0197 NC_009455.1 205657 205983 R hypothetical protein complement(205657..205983) Dehalococcoides mccartyi BAV1 5132132 YP_001213666.1 CDS DehaBAV1_0198 NC_009455.1 206168 207424 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(206168..207424) Dehalococcoides mccartyi BAV1 5132244 YP_001213667.1 CDS DehaBAV1_0199 NC_009455.1 207438 208577 R hypothetical protein complement(207438..208577) Dehalococcoides mccartyi BAV1 5132202 YP_001213668.1 CDS DehaBAV1_0200 NC_009455.1 208587 209246 R hypothetical protein complement(208587..209246) Dehalococcoides mccartyi BAV1 5132217 YP_001213669.1 CDS DehaBAV1_0201 NC_009455.1 209261 210178 R hypothetical protein complement(209261..210178) Dehalococcoides mccartyi BAV1 5132218 YP_001213670.1 CDS DehaBAV1_0202 NC_009455.1 210179 210436 R hypothetical protein complement(210179..210436) Dehalococcoides mccartyi BAV1 5132138 YP_001213671.1 CDS DehaBAV1_0203 NC_009455.1 210436 210903 R hypothetical protein complement(210436..210903) Dehalococcoides mccartyi BAV1 5132437 YP_001213672.1 CDS DehaBAV1_0204 NC_009455.1 210903 211568 R hypothetical protein complement(210903..211568) Dehalococcoides mccartyi BAV1 5132107 YP_001213673.1 CDS DehaBAV1_0205 NC_009455.1 211621 212151 R hypothetical protein complement(211621..212151) Dehalococcoides mccartyi BAV1 5132123 YP_001213674.1 CDS DehaBAV1_0206 NC_009455.1 212169 212756 R hypothetical protein complement(212169..212756) Dehalococcoides mccartyi BAV1 5132182 YP_001213675.1 CDS DehaBAV1_0207 NC_009455.1 213369 213581 R hypothetical protein complement(213369..213581) Dehalococcoides mccartyi BAV1 5132187 YP_001213676.1 CDS DehaBAV1_0208 NC_009455.1 213999 214247 R hypothetical protein complement(213999..214247) Dehalococcoides mccartyi BAV1 5132351 YP_001213677.1 CDS DehaBAV1_0209 NC_009455.1 214511 215332 R hypothetical protein complement(214511..215332) Dehalococcoides mccartyi BAV1 5132185 YP_001213678.1 CDS DehaBAV1_0210 NC_009455.1 215506 216429 R PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; ATPase complement(215506..216429) Dehalococcoides mccartyi BAV1 5132152 YP_001213679.1 CDS DehaBAV1_0212 NC_009455.1 217143 219338 R hypothetical protein complement(217143..219338) Dehalococcoides mccartyi BAV1 5132388 YP_001213680.1 CDS DehaBAV1_0213 NC_009455.1 219388 220368 R hypothetical protein complement(219388..220368) Dehalococcoides mccartyi BAV1 5132178 YP_001213681.1 CDS DehaBAV1_0214 NC_009455.1 220889 221284 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 220889..221284 Dehalococcoides mccartyi BAV1 5132162 YP_001213682.1 CDS DehaBAV1_0215 NC_009455.1 221289 222218 D hypothetical protein 221289..222218 Dehalococcoides mccartyi BAV1 5132143 YP_001213683.1 CDS DehaBAV1_0216 NC_009455.1 222243 223796 D PFAM: Resolvase, N-terminal domain; Recombinase; resolvase domain-containing protein 222243..223796 Dehalococcoides mccartyi BAV1 5132174 YP_001213684.1 CDS DehaBAV1_0217 NC_009455.1 223909 224403 R hypothetical protein complement(223909..224403) Dehalococcoides mccartyi BAV1 5132421 YP_001213685.1 CDS DehaBAV1_0218 NC_009455.1 224517 225551 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; L-threonine aldolase complement(224517..225551) Dehalococcoides mccartyi BAV1 5132167 YP_001213686.1 CDS DehaBAV1_0219 NC_009455.1 225636 226538 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 225636..226538 Dehalococcoides mccartyi BAV1 5132124 YP_001213687.1 CDS DehaBAV1_0220 NC_009455.1 226535 227257 D PFAM: protein of unknown function DUF45; hypothetical protein 226535..227257 Dehalococcoides mccartyi BAV1 5132134 YP_001213688.1 CDS DehaBAV1_0221 NC_009455.1 227481 227741 D hypothetical protein 227481..227741 Dehalococcoides mccartyi BAV1 5132104 YP_001213689.1 CDS DehaBAV1_0222 NC_009455.1 227748 228581 D PFAM: alpha/beta hydrolase fold; acylglycerol lipase 227748..228581 Dehalococcoides mccartyi BAV1 5132149 YP_001213690.1 CDS DehaBAV1_0223 NC_009455.1 228810 229313 R hypothetical protein complement(228810..229313) Dehalococcoides mccartyi BAV1 5132144 YP_001213691.1 CDS DehaBAV1_0224 NC_009455.1 229353 231074 R TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; hydrogenase, Fe-only complement(229353..231074) Dehalococcoides mccartyi BAV1 5132131 YP_001213692.1 CDS DehaBAV1_0225 NC_009455.1 231062 232315 R PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) complement(231062..232315) Dehalococcoides mccartyi BAV1 5132092 YP_001213693.1 CDS DehaBAV1_0226 NC_009455.1 232317 232784 R PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit complement(232317..232784) Dehalococcoides mccartyi BAV1 5132048 YP_001213694.1 CDS DehaBAV1_0227 NC_009455.1 233230 233643 R PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase complement(233230..233643) Dehalococcoides mccartyi BAV1 5131994 YP_001213695.1 CDS DehaBAV1_0228 NC_009455.1 233645 234310 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU complement(233645..234310) Dehalococcoides mccartyi BAV1 5131998 YP_001213696.1 CDS DehaBAV1_0229 NC_009455.1 234323 235078 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein complement(234323..235078) Dehalococcoides mccartyi BAV1 5132098 YP_001213697.1 CDS DehaBAV1_0230 NC_009455.1 235079 235930 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(235079..235930) Dehalococcoides mccartyi BAV1 5132000 YP_001213698.1 CDS DehaBAV1_0231 NC_009455.1 235923 236783 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(235923..236783) Dehalococcoides mccartyi BAV1 5132429 YP_001213699.1 CDS DehaBAV1_0232 NC_009455.1 236858 237712 R TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate binding protein complement(236858..237712) Dehalococcoides mccartyi BAV1 5131569 YP_001213700.1 CDS mgsA NC_009455.1 237752 238186 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(237752..238186) Dehalococcoides mccartyi BAV1 5131461 YP_001213701.1 CDS DehaBAV1_0234 NC_009455.1 238395 240140 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(238395..240140) Dehalococcoides mccartyi BAV1 5132250 YP_001213702.1 CDS DehaBAV1_0235 NC_009455.1 240143 240835 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(240143..240835) Dehalococcoides mccartyi BAV1 5132406 YP_001213703.1 CDS DehaBAV1_0236 NC_009455.1 240968 241387 D hypothetical protein 240968..241387 Dehalococcoides mccartyi BAV1 5132389 YP_001213704.1 CDS DehaBAV1_0237 NC_009455.1 241477 241689 D hypothetical protein 241477..241689 Dehalococcoides mccartyi BAV1 5132432 YP_001213705.1 CDS DehaBAV1_0238 NC_009455.1 241693 242652 R PFAM: ornithine cyclodeaminase/mu-crystallin; L-alanine dehydrogenase complement(241693..242652) Dehalococcoides mccartyi BAV1 5132445 YP_001213706.1 CDS DehaBAV1_0239 NC_009455.1 242759 243331 D PFAM: Rhomboid family protein; rhomboid family protein 242759..243331 Dehalococcoides mccartyi BAV1 5131999 YP_001213707.1 CDS DehaBAV1_0240 NC_009455.1 243476 243868 D PFAM: response regulator receiver; response regulator receiver protein 243476..243868 Dehalococcoides mccartyi BAV1 5132007 YP_001213708.1 CDS DehaBAV1_0241 NC_009455.1 243949 244320 D PFAM: response regulator receiver; response regulator receiver protein 243949..244320 Dehalococcoides mccartyi BAV1 5131965 YP_001213709.1 CDS DehaBAV1_0242 NC_009455.1 244313 244729 D PFAM: protein of unknown function UPF0047; hypothetical protein 244313..244729 Dehalococcoides mccartyi BAV1 5131972 YP_001213710.1 CDS DehaBAV1_0243 NC_009455.1 244769 246160 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 244769..246160 Dehalococcoides mccartyi BAV1 5132002 YP_001213711.1 CDS DehaBAV1_0245 NC_009455.1 249514 250638 R TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase, family 3; anthranilate phosphoribosyltransferase complement(249514..250638) Dehalococcoides mccartyi BAV1 5132110 YP_001213712.1 CDS DehaBAV1_0246 NC_009455.1 250653 251684 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(250653..251684) Dehalococcoides mccartyi BAV1 5131993 YP_001213713.1 CDS DehaBAV1_0247 NC_009455.1 252226 254028 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 252226..254028 Dehalococcoides mccartyi BAV1 5132012 YP_001213714.1 CDS DehaBAV1_0248 NC_009455.1 254159 254446 D hypothetical protein 254159..254446 Dehalococcoides mccartyi BAV1 5132015 YP_001213715.1 CDS DehaBAV1_0249 NC_009455.1 254443 255939 R catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate; pyruvate carboxylase subunit A complement(254443..255939) Dehalococcoides mccartyi BAV1 5132029 YP_001213716.1 CDS DehaBAV1_0250 NC_009455.1 255932 257680 R catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B complement(255932..257680) Dehalococcoides mccartyi BAV1 5131990 YP_001213717.1 CDS DehaBAV1_0251 NC_009455.1 257974 258516 D TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; DJ-1 family protein 257974..258516 Dehalococcoides mccartyi BAV1 5132030 YP_001213718.1 CDS DehaBAV1_0252 NC_009455.1 258696 259334 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 258696..259334 Dehalococcoides mccartyi BAV1 5132041 YP_001213719.1 CDS DehaBAV1_0253 NC_009455.1 259346 260212 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 259346..260212 Dehalococcoides mccartyi BAV1 5131977 YP_001213720.1 CDS DehaBAV1_0254 NC_009455.1 260209 261267 D PFAM: ABC-2 type transporter; ABC-2 type transporter 260209..261267 Dehalococcoides mccartyi BAV1 5132016 YP_001213721.1 CDS DehaBAV1_0255 NC_009455.1 261264 262337 D PFAM: ABC-2 type transporter; ABC-2 type transporter 261264..262337 Dehalococcoides mccartyi BAV1 5132418 YP_001213722.1 CDS DehaBAV1_0256 NC_009455.1 263015 263818 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; formate dehydrogenase subunit beta 263015..263818 Dehalococcoides mccartyi BAV1 5132340 YP_001213723.1 CDS DehaBAV1_0257 NC_009455.1 263871 264935 D TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 263871..264935 Dehalococcoides mccartyi BAV1 5132013 YP_001213724.1 CDS DehaBAV1_0258 NC_009455.1 264966 266546 D PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 264966..266546 Dehalococcoides mccartyi BAV1 5131996 YP_001213725.1 CDS DehaBAV1_0259 NC_009455.1 266549 267031 D TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 266549..267031 Dehalococcoides mccartyi BAV1 5131995 YP_001213726.1 CDS DehaBAV1_0260 NC_009455.1 267098 269017 R PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(267098..269017) Dehalococcoides mccartyi BAV1 5131515 YP_001213727.1 CDS DehaBAV1_0261 NC_009455.1 269080 270384 R PFAM: LemA family protein; LemA family protein complement(269080..270384) Dehalococcoides mccartyi BAV1 5132021 YP_001213728.1 CDS DehaBAV1_0262 NC_009455.1 270583 271422 D TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein 270583..271422 Dehalococcoides mccartyi BAV1 5132271 YP_001213729.1 CDS DehaBAV1_0263 NC_009455.1 271569 271934 D hypothetical protein 271569..271934 Dehalococcoides mccartyi BAV1 5131622 YP_001213730.1 CDS DehaBAV1_0264 NC_009455.1 272052 273038 R chromosome partitioning ATPase complement(272052..273038) Dehalococcoides mccartyi BAV1 5132191 YP_001213731.1 CDS DehaBAV1_0265 NC_009455.1 273519 274457 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 273519..274457 Dehalococcoides mccartyi BAV1 5132272 YP_001213732.1 CDS DehaBAV1_0266 NC_009455.1 274478 275659 D PFAM: Polysulphide reductase, NrfD; polysulphide reductase, NrfD 274478..275659 Dehalococcoides mccartyi BAV1 5131942 YP_001213733.1 CDS DehaBAV1_0267 NC_009455.1 275652 278864 D PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase Fe4S4 region 275652..278864 Dehalococcoides mccartyi BAV1 5131095 YP_001213734.1 CDS DehaBAV1_0268 NC_009455.1 278887 279576 D hypothetical protein 278887..279576 Dehalococcoides mccartyi BAV1 5131094 YP_001213735.1 CDS DehaBAV1_0269 NC_009455.1 279577 280722 D PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdenum cofactor guanylyltransferase 279577..280722 Dehalococcoides mccartyi BAV1 5131092 YP_001213736.1 CDS DehaBAV1_0270 NC_009455.1 280911 281219 D hypothetical protein 280911..281219 Dehalococcoides mccartyi BAV1 5131950 YP_001213737.1 CDS DehaBAV1_0272 NC_009455.1 282499 282777 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 282499..282777 Dehalococcoides mccartyi BAV1 5132296 YP_001213738.1 CDS DehaBAV1_0273 NC_009455.1 282918 283613 D PFAM: Integrase, catalytic region; integrase catalytic subunit 282918..283613 Dehalococcoides mccartyi BAV1 5131093 YP_001213739.1 CDS DehaBAV1_0274 NC_009455.1 284016 284702 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(284016..284702) Dehalococcoides mccartyi BAV1 5131012 YP_001213740.1 CDS DehaBAV1_0275 NC_009455.1 284702 287914 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase complement(284702..287914) Dehalococcoides mccartyi BAV1 5132260 YP_001213741.1 CDS DehaBAV1_0276 NC_009455.1 288132 289703 D TIGRFAM: reductive dehalogenase; reductive dehalogenase 288132..289703 Dehalococcoides mccartyi BAV1 5132094 YP_001213742.1 CDS DehaBAV1_0277 NC_009455.1 289727 289999 D hypothetical protein 289727..289999 Dehalococcoides mccartyi BAV1 5131041 YP_001213743.1 CDS DehaBAV1_0278 NC_009455.1 290133 290546 R hypothetical protein complement(290133..290546) Dehalococcoides mccartyi BAV1 5131075 YP_001213744.1 CDS DehaBAV1_0279 NC_009455.1 290722 292206 R PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(290722..292206) Dehalococcoides mccartyi BAV1 5131072 YP_001213745.1 CDS DehaBAV1_0280 NC_009455.1 292229 292978 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(292229..292978) Dehalococcoides mccartyi BAV1 5132412 YP_001213746.1 CDS DehaBAV1_0281 NC_009455.1 293045 294457 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(293045..294457) Dehalococcoides mccartyi BAV1 5132381 YP_001213747.1 CDS DehaBAV1_0282 NC_009455.1 294482 294757 R hypothetical protein complement(294482..294757) Dehalococcoides mccartyi BAV1 5131073 YP_001213748.1 CDS DehaBAV1_0283 NC_009455.1 294908 295174 R hypothetical protein complement(294908..295174) Dehalococcoides mccartyi BAV1 5132358 YP_001213749.1 CDS DehaBAV1_0284 NC_009455.1 295198 296688 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(295198..296688) Dehalococcoides mccartyi BAV1 5132431 YP_001213750.1 CDS DehaBAV1_0285 NC_009455.1 296763 297491 R TIGRFAM: putative ATP binding protein; PFAM: protein of unknown function DUF71, ATP-binding region; putative ATP binding protein complement(296763..297491) Dehalococcoides mccartyi BAV1 5132085 YP_001213751.1 CDS DehaBAV1_0286 NC_009455.1 297683 298363 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(297683..298363) Dehalococcoides mccartyi BAV1 5132090 YP_001213752.1 CDS DehaBAV1_0287 NC_009455.1 298344 298790 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase complement(298344..298790) Dehalococcoides mccartyi BAV1 5132087 YP_001213753.1 CDS DehaBAV1_0288 NC_009455.1 298979 299257 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 298979..299257 Dehalococcoides mccartyi BAV1 5132097 YP_001213754.1 CDS DehaBAV1_0289 NC_009455.1 299398 300093 D PFAM: Integrase, catalytic region; integrase catalytic subunit 299398..300093 Dehalococcoides mccartyi BAV1 5132362 YP_001213755.1 CDS DehaBAV1_0290 NC_009455.1 300086 301930 R TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein complement(300086..301930) Dehalococcoides mccartyi BAV1 5132396 YP_001213756.1 CDS DehaBAV1_0292 NC_009455.1 302909 303697 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(302909..303697) Dehalococcoides mccartyi BAV1 5132069 YP_001213757.1 CDS DehaBAV1_0293 NC_009455.1 303835 304119 R PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(303835..304119) Dehalococcoides mccartyi BAV1 5132216 YP_001213758.1 CDS DehaBAV1_0294 NC_009455.1 304200 304961 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase 304200..304961 Dehalococcoides mccartyi BAV1 5132363 YP_001213759.1 CDS DehaBAV1_0295 NC_009455.1 304962 305693 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 304962..305693 Dehalococcoides mccartyi BAV1 5132347 YP_001213760.1 CDS DehaBAV1_0296 NC_009455.1 305957 307495 D TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase 305957..307495 Dehalococcoides mccartyi BAV1 5132361 YP_001213761.1 CDS DehaBAV1_0297 NC_009455.1 307553 307783 D hypothetical protein 307553..307783 Dehalococcoides mccartyi BAV1 5132073 YP_001213762.1 CDS DehaBAV1_0298 NC_009455.1 308094 308381 D hypothetical protein 308094..308381 Dehalococcoides mccartyi BAV1 5132082 YP_001213763.1 CDS DehaBAV1_0299 NC_009455.1 308492 308707 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(308492..308707) Dehalococcoides mccartyi BAV1 5132064 YP_001213764.1 CDS DehaBAV1_0300 NC_009455.1 308790 309389 D hypothetical protein 308790..309389 Dehalococcoides mccartyi BAV1 5132078 YP_001213765.1 CDS DehaBAV1_0301 NC_009455.1 309434 309559 R hypothetical protein complement(309434..309559) Dehalococcoides mccartyi BAV1 5132298 YP_001213766.1 CDS DehaBAV1_0302 NC_009455.1 309679 310638 D hypothetical protein 309679..310638 Dehalococcoides mccartyi BAV1 5132316 YP_001213767.1 CDS DehaBAV1_0303 NC_009455.1 310635 312281 D PFAM: Resolvase, N-terminal domain; Recombinase; resolvase domain-containing protein 310635..312281 Dehalococcoides mccartyi BAV1 5132307 YP_001213768.1 CDS DehaBAV1_0304 NC_009455.1 312287 313114 R PFAM: Patatin; patatin complement(312287..313114) Dehalococcoides mccartyi BAV1 5132053 YP_001213769.1 CDS DehaBAV1_0305 NC_009455.1 313092 313727 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(313092..313727) Dehalococcoides mccartyi BAV1 5132341 YP_001213770.1 CDS DehaBAV1_0306 NC_009455.1 313732 315324 R PFAM: protein of unknown function DUF87; hypothetical protein complement(313732..315324) Dehalococcoides mccartyi BAV1 5132301 YP_001213771.1 CDS DehaBAV1_0307 NC_009455.1 315321 315920 R hypothetical protein complement(315321..315920) Dehalococcoides mccartyi BAV1 5132331 YP_001213772.1 CDS DehaBAV1_0308 NC_009455.1 315990 317195 R hypothetical protein complement(315990..317195) Dehalococcoides mccartyi BAV1 5132099 YP_001213773.1 CDS DehaBAV1_0309 NC_009455.1 317320 317943 D PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA 317320..317943 Dehalococcoides mccartyi BAV1 5132232 YP_001213774.1 CDS DehaBAV1_0310 NC_009455.1 317970 318995 D PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein 317970..318995 Dehalococcoides mccartyi BAV1 5131742 YP_001213775.1 CDS DehaBAV1_0311 NC_009455.1 318969 319904 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(318969..319904) Dehalococcoides mccartyi BAV1 5132074 YP_001213776.1 CDS secF NC_009455.1 319927 320832 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(319927..320832) Dehalococcoides mccartyi BAV1 5132328 YP_001213777.1 CDS secD NC_009455.1 320825 322174 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(320825..322174) Dehalococcoides mccartyi BAV1 5131470 YP_001213778.1 CDS DehaBAV1_0314 NC_009455.1 322188 323684 R PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; polynucleotide adenylyltransferase/metal dependent phosphohydrolase complement(322188..323684) Dehalococcoides mccartyi BAV1 5131463 YP_001213779.1 CDS DehaBAV1_0315 NC_009455.1 323844 324245 R PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(323844..324245) Dehalococcoides mccartyi BAV1 5131581 YP_001213780.1 CDS DehaBAV1_0316 NC_009455.1 324505 326952 R TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; primosomal protein N' complement(324505..326952) Dehalococcoides mccartyi BAV1 5131478 YP_001213781.1 CDS rplS NC_009455.1 326973 327368 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(326973..327368) Dehalococcoides mccartyi BAV1 5131464 YP_001213782.1 CDS trmD NC_009455.1 327492 328238 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(327492..328238) Dehalococcoides mccartyi BAV1 5131576 YP_001213783.1 CDS DehaBAV1_0319 NC_009455.1 328421 328849 D TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; MraZ protein 328421..328849 Dehalococcoides mccartyi BAV1 5132133 YP_001213784.1 CDS mraW NC_009455.1 328856 329905 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 328856..329905 Dehalococcoides mccartyi BAV1 5132289 YP_001213785.1 CDS DehaBAV1_0321 NC_009455.1 329976 331202 D PFAM: cell division protein FtsA; cell division protein FtsA 329976..331202 Dehalococcoides mccartyi BAV1 5132158 YP_001213786.1 CDS DehaBAV1_0322 NC_009455.1 331242 332372 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 331242..332372 Dehalococcoides mccartyi BAV1 5132173 YP_001213787.1 CDS nrdR NC_009455.1 332516 333043 D PFAM: ATP-cone domain protein; transcriptional regulator NrdR 332516..333043 Dehalococcoides mccartyi BAV1 5131509 YP_001213788.1 CDS DehaBAV1_0324 NC_009455.1 333045 335645 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 333045..335645 Dehalococcoides mccartyi BAV1 5131516 YP_001213789.1 CDS DehaBAV1_0325 NC_009455.1 335639 335758 D hypothetical protein 335639..335758 Dehalococcoides mccartyi BAV1 5131714 YP_001213790.1 CDS DehaBAV1_0326 NC_009455.1 335875 336459 D PFAM: protein of unknown function DUF88; hypothetical protein 335875..336459 Dehalococcoides mccartyi BAV1 5131735 YP_001213791.1 CDS DehaBAV1_0327 NC_009455.1 336428 338062 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 336428..338062 Dehalococcoides mccartyi BAV1 5131740 YP_001213792.1 CDS DehaBAV1_0328 NC_009455.1 338112 338561 R PFAM: GatB/Yqey domain protein; GatB/Yqey domain-containing protein complement(338112..338561) Dehalococcoides mccartyi BAV1 5131727 YP_001213793.1 CDS rpsU NC_009455.1 338563 338757 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(338563..338757) Dehalococcoides mccartyi BAV1 5131720 YP_001213794.1 CDS DehaBAV1_0330 NC_009455.1 338931 340652 R hypothetical protein complement(338931..340652) Dehalococcoides mccartyi BAV1 5132145 YP_001213795.1 CDS DehaBAV1_0331 NC_009455.1 340905 341219 D hypothetical protein 340905..341219 Dehalococcoides mccartyi BAV1 5132153 YP_001213796.1 CDS DehaBAV1_0332 NC_009455.1 341229 342593 D PFAM: phage portal protein, SPP1; phage portal protein, SPP1 341229..342593 Dehalococcoides mccartyi BAV1 5132151 YP_001213797.1 CDS DehaBAV1_0333 NC_009455.1 342617 343066 D hypothetical protein 342617..343066 Dehalococcoides mccartyi BAV1 5132148 YP_001213798.1 CDS DehaBAV1_0334 NC_009455.1 343069 343989 D hypothetical protein 343069..343989 Dehalococcoides mccartyi BAV1 5132403 YP_001213799.1 CDS DehaBAV1_0335 NC_009455.1 344057 344656 D hypothetical protein 344057..344656 Dehalococcoides mccartyi BAV1 5131582 YP_001213800.1 CDS DehaBAV1_0336 NC_009455.1 344703 344942 D hypothetical protein 344703..344942 Dehalococcoides mccartyi BAV1 5131543 YP_001213801.1 CDS DehaBAV1_0337 NC_009455.1 344943 346943 D hypothetical protein 344943..346943 Dehalococcoides mccartyi BAV1 5131680 YP_001213802.1 CDS DehaBAV1_0338 NC_009455.1 346953 347165 D hypothetical protein 346953..347165 Dehalococcoides mccartyi BAV1 5132299 YP_001213803.1 CDS DehaBAV1_0339 NC_009455.1 347280 348653 R hypothetical protein complement(347280..348653) Dehalococcoides mccartyi BAV1 5131496 YP_001213804.1 CDS DehaBAV1_0340 NC_009455.1 348643 349005 R hypothetical protein complement(348643..349005) Dehalococcoides mccartyi BAV1 5131566 YP_001213805.1 CDS DehaBAV1_0341 NC_009455.1 349113 349808 D PFAM: protein of unknown function DUF164; hypothetical protein 349113..349808 Dehalococcoides mccartyi BAV1 5131477 YP_001213806.1 CDS DehaBAV1_0343 NC_009455.1 350773 351390 R hypothetical protein complement(350773..351390) Dehalococcoides mccartyi BAV1 5131221 YP_001213807.1 CDS DehaBAV1_0344 NC_009455.1 351502 351675 R hypothetical protein complement(351502..351675) Dehalococcoides mccartyi BAV1 5131420 YP_001213808.1 CDS DehaBAV1_0345 NC_009455.1 351733 351963 D hypothetical protein 351733..351963 Dehalococcoides mccartyi BAV1 5131476 YP_001213809.1 CDS DehaBAV1_0346 NC_009455.1 352061 353194 D TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 352061..353194 Dehalococcoides mccartyi BAV1 5132136 YP_001213810.1 CDS pheS NC_009455.1 353310 354350 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 353310..354350 Dehalococcoides mccartyi BAV1 5132139 YP_001213811.1 CDS pheT NC_009455.1 354352 356781 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 354352..356781 Dehalococcoides mccartyi BAV1 5132226 YP_001213812.1 CDS DehaBAV1_0349 NC_009455.1 356871 357506 D PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 356871..357506 Dehalococcoides mccartyi BAV1 5132128 YP_001213813.1 CDS DehaBAV1_0350 NC_009455.1 357571 359280 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(357571..359280) Dehalococcoides mccartyi BAV1 5131469 YP_001213814.1 CDS ispG NC_009455.1 359374 360420 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(359374..360420) Dehalococcoides mccartyi BAV1 5131479 YP_001213815.1 CDS DehaBAV1_0352 NC_009455.1 360456 361493 R PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; peptidase M50 complement(360456..361493) Dehalococcoides mccartyi BAV1 5131497 YP_001213816.1 CDS DehaBAV1_0353 NC_009455.1 361494 362627 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(361494..362627) Dehalococcoides mccartyi BAV1 5131578 YP_001213817.1 CDS DehaBAV1_0354 NC_009455.1 362612 363415 R PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(362612..363415) Dehalococcoides mccartyi BAV1 5131484 YP_001213818.1 CDS DehaBAV1_0355 NC_009455.1 363419 364129 R TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(363419..364129) Dehalococcoides mccartyi BAV1 5131585 YP_001213819.1 CDS frr NC_009455.1 364194 364715 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(364194..364715) Dehalococcoides mccartyi BAV1 5131506 YP_001213820.1 CDS pyrH NC_009455.1 364753 365478 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(364753..365478) Dehalococcoides mccartyi BAV1 5132141 YP_001213821.1 CDS tsf NC_009455.1 365493 365996 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(365493..365996) Dehalococcoides mccartyi BAV1 5132147 YP_001213822.1 CDS rpsB NC_009455.1 366021 366758 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(366021..366758) Dehalococcoides mccartyi BAV1 5132121 YP_001213823.1 CDS DehaBAV1_0360 NC_009455.1 366944 367711 R TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I complement(366944..367711) Dehalococcoides mccartyi BAV1 5132125 YP_001213824.1 CDS DehaBAV1_0361 NC_009455.1 367718 370579 R TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II complement(367718..370579) Dehalococcoides mccartyi BAV1 5131715 YP_001213825.1 CDS DehaBAV1_0362 NC_009455.1 370583 371464 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(370583..371464) Dehalococcoides mccartyi BAV1 5131467 YP_001213826.1 CDS DehaBAV1_0363 NC_009455.1 371649 372047 D PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 371649..372047 Dehalococcoides mccartyi BAV1 5131473 YP_001213827.1 CDS DehaBAV1_0364 NC_009455.1 372228 372998 D hypothetical protein 372228..372998 Dehalococcoides mccartyi BAV1 5132103 YP_001213828.1 CDS DehaBAV1_0365 NC_009455.1 373077 374222 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase complement(373077..374222) Dehalococcoides mccartyi BAV1 5131732 YP_001213829.1 CDS DehaBAV1_0366 NC_009455.1 374484 375308 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 374484..375308 Dehalococcoides mccartyi BAV1 5131491 YP_001213830.1 CDS DehaBAV1_0367 NC_009455.1 375333 375548 D hypothetical protein 375333..375548 Dehalococcoides mccartyi BAV1 5132353 YP_001213831.1 CDS DehaBAV1_0368 NC_009455.1 375557 377218 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 375557..377218 Dehalococcoides mccartyi BAV1 5132119 YP_001213832.1 CDS DehaBAV1_0369 NC_009455.1 377240 378214 D PFAM: Polyprenyl synthetase; polyprenyl synthetase 377240..378214 Dehalococcoides mccartyi BAV1 5132135 YP_001213833.1 CDS DehaBAV1_0370 NC_009455.1 378429 380243 R TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(378429..380243) Dehalococcoides mccartyi BAV1 5132129 YP_001213834.1 CDS DehaBAV1_0371 NC_009455.1 380315 381145 R PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2; endonuclease IV complement(380315..381145) Dehalococcoides mccartyi BAV1 5132070 YP_001213835.1 CDS DehaBAV1_0372 NC_009455.1 381265 381609 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 381265..381609 Dehalococcoides mccartyi BAV1 5132055 YP_001213836.1 CDS ndk NC_009455.1 381610 382038 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(381610..382038) Dehalococcoides mccartyi BAV1 5132054 YP_001213837.1 CDS DehaBAV1_0374 NC_009455.1 382048 383418 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: peptidase M22, glycoprotease; Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(382048..383418) Dehalococcoides mccartyi BAV1 5132038 YP_001213838.1 CDS DehaBAV1_0375 NC_009455.1 383396 383887 R PFAM: protein of unknown function UPF0079; hypothetical protein complement(383396..383887) Dehalococcoides mccartyi BAV1 5132071 YP_001213839.1 CDS DehaBAV1_0376 NC_009455.1 383884 384894 R TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(383884..384894) Dehalococcoides mccartyi BAV1 5131096 YP_001213840.1 CDS DehaBAV1_0377 NC_009455.1 385186 385962 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; demethylmenaquinone methyltransferase 385186..385962 Dehalococcoides mccartyi BAV1 5131026 YP_001213841.1 CDS DehaBAV1_0378 NC_009455.1 385964 386731 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; methyltransferase type 11 385964..386731 Dehalococcoides mccartyi BAV1 5131020 YP_001213842.1 CDS DehaBAV1_0379 NC_009455.1 386733 387827 D PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 386733..387827 Dehalococcoides mccartyi BAV1 5131071 YP_001213843.1 CDS DehaBAV1_0380 NC_009455.1 387811 388731 D PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphtoate prenyltransferase 387811..388731 Dehalococcoides mccartyi BAV1 5131174 YP_001213844.1 CDS DehaBAV1_0381 NC_009455.1 388731 389333 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; methyltransferase type 11 388731..389333 Dehalococcoides mccartyi BAV1 5131152 YP_001213845.1 CDS DehaBAV1_0382 NC_009455.1 389414 390193 D PFAM: metallophosphoesterase; metallophosphoesterase 389414..390193 Dehalococcoides mccartyi BAV1 5131082 YP_001213846.1 CDS ksgA NC_009455.1 390213 391088 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 390213..391088 Dehalococcoides mccartyi BAV1 5131137 YP_001213847.1 CDS DehaBAV1_0384 NC_009455.1 391082 391936 D TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 391082..391936 Dehalococcoides mccartyi BAV1 5131024 YP_001213848.1 CDS DehaBAV1_0385 NC_009455.1 391992 392489 D PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; rubrerythrin 391992..392489 Dehalococcoides mccartyi BAV1 5131022 YP_001213849.1 CDS DehaBAV1_0386 NC_009455.1 392569 392820 R hypothetical protein complement(392569..392820) Dehalococcoides mccartyi BAV1 5131019 YP_001213850.1 CDS DehaBAV1_0387 NC_009455.1 392895 393704 R PFAM: Ion transport protein; Ion transport 2 domain protein; Ion transport protein complement(392895..393704) Dehalococcoides mccartyi BAV1 5131013 YP_001213851.1 CDS DehaBAV1_0388 NC_009455.1 393697 394947 R PFAM: Polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase complement(393697..394947) Dehalococcoides mccartyi BAV1 5131127 YP_001213852.1 CDS DehaBAV1_0389 NC_009455.1 395028 395945 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 395028..395945 Dehalococcoides mccartyi BAV1 5131102 YP_001213853.1 CDS DehaBAV1_0390 NC_009455.1 395942 396709 D PFAM: ABC-2 type transporter; ABC-2 type transporter 395942..396709 Dehalococcoides mccartyi BAV1 5131044 YP_001213854.1 CDS DehaBAV1_0391 NC_009455.1 396759 397310 D dephospho-CoA kinase-like protein 396759..397310 Dehalococcoides mccartyi BAV1 5131052 YP_001213855.1 CDS DehaBAV1_0392 NC_009455.1 397307 397780 D PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 397307..397780 Dehalococcoides mccartyi BAV1 5131029 YP_001213856.1 CDS DehaBAV1_0393 NC_009455.1 397868 398773 D PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 397868..398773 Dehalococcoides mccartyi BAV1 5131064 YP_001213857.1 CDS DehaBAV1_0394 NC_009455.1 398844 399356 R deoxyuridine 5'-triphosphate nucleotidohydrolase complement(398844..399356) Dehalococcoides mccartyi BAV1 5131040 YP_001213858.1 CDS DehaBAV1_0395 NC_009455.1 399507 399857 D hypothetical protein 399507..399857 Dehalococcoides mccartyi BAV1 5131037 YP_001213859.1 CDS DehaBAV1_0396 NC_009455.1 399945 400706 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(399945..400706) Dehalococcoides mccartyi BAV1 5131118 YP_001213860.1 CDS DehaBAV1_0397 NC_009455.1 400706 401527 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(400706..401527) Dehalococcoides mccartyi BAV1 5131031 YP_001213861.1 CDS DehaBAV1_0398 NC_009455.1 401580 402353 R PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; extracellular solute-binding protein complement(401580..402353) Dehalococcoides mccartyi BAV1 5131021 YP_001213862.1 CDS DehaBAV1_0399 NC_009455.1 402553 403392 R TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein complement(402553..403392) Dehalococcoides mccartyi BAV1 5131121 YP_001213863.1 CDS DehaBAV1_0400 NC_009455.1 404163 405113 D PFAM: Mg2+ transporter protein, CorA family protein; Mg2+ transporter protein, CorA family protein 404163..405113 Dehalococcoides mccartyi BAV1 5132026 YP_001213864.1 CDS DehaBAV1_0401 NC_009455.1 405135 405794 D TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; hypothetical protein 405135..405794 Dehalococcoides mccartyi BAV1 5131106 YP_001213865.1 CDS DehaBAV1_0402 NC_009455.1 405815 406591 D hypothetical protein 405815..406591 Dehalococcoides mccartyi BAV1 5131126 YP_001213866.1 CDS DehaBAV1_0403 NC_009455.1 406594 407097 D PFAM: protein of unknown function DUF82; hypothetical protein 406594..407097 Dehalococcoides mccartyi BAV1 5131179 YP_001213867.1 CDS DehaBAV1_0404 NC_009455.1 407134 408672 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; carbohydrate kinase 407134..408672 Dehalococcoides mccartyi BAV1 5131178 YP_001213868.1 CDS DehaBAV1_0405 NC_009455.1 408676 409467 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 408676..409467 Dehalococcoides mccartyi BAV1 5131158 YP_001213869.1 CDS DehaBAV1_0406 NC_009455.1 409570 410751 D TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 409570..410751 Dehalococcoides mccartyi BAV1 5131151 YP_001213870.1 CDS valS NC_009455.1 410839 413481 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 410839..413481 Dehalococcoides mccartyi BAV1 5131139 YP_001213871.1 CDS DehaBAV1_0408 NC_009455.1 413478 414551 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(413478..414551) Dehalococcoides mccartyi BAV1 5131135 YP_001213872.1 CDS DehaBAV1_0409 NC_009455.1 414532 415230 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(414532..415230) Dehalococcoides mccartyi BAV1 5131129 YP_001213873.1 CDS DehaBAV1_0410 NC_009455.1 415333 416016 R hypothetical protein complement(415333..416016) Dehalococcoides mccartyi BAV1 5131124 YP_001213874.1 CDS secA NC_009455.1 416041 418899 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(416041..418899) Dehalococcoides mccartyi BAV1 5131113 YP_001213875.1 CDS DehaBAV1_0412 NC_009455.1 418903 419877 R TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(418903..419877) Dehalococcoides mccartyi BAV1 5131105 YP_001213876.1 CDS glyA NC_009455.1 419893 421140 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(419893..421140) Dehalococcoides mccartyi BAV1 5131101 YP_001213877.1 CDS DehaBAV1_0414 NC_009455.1 421274 421894 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-related protein 421274..421894 Dehalococcoides mccartyi BAV1 5131098 YP_001213878.1 CDS DehaBAV1_0415 NC_009455.1 421901 423556 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 421901..423556 Dehalococcoides mccartyi BAV1 5131088 YP_001213879.1 CDS DehaBAV1_0416 NC_009455.1 423576 426026 D PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; cell division protein FtsK 423576..426026 Dehalococcoides mccartyi BAV1 5131074 YP_001213880.1 CDS DehaBAV1_0417 NC_009455.1 426065 426214 R hypothetical protein complement(426065..426214) Dehalococcoides mccartyi BAV1 5131069 YP_001213881.1 CDS DehaBAV1_0418 NC_009455.1 426211 428205 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(426211..428205) Dehalococcoides mccartyi BAV1 5131062 YP_001213882.1 CDS ruvA NC_009455.1 428251 428835 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(428251..428835) Dehalococcoides mccartyi BAV1 5131046 YP_001213883.1 CDS DehaBAV1_0420 NC_009455.1 428832 429335 R TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC complement(428832..429335) Dehalococcoides mccartyi BAV1 5131018 YP_001213884.1 CDS DehaBAV1_0421 NC_009455.1 429339 430094 R PFAM: protein of unknown function DUF28; hypothetical protein complement(429339..430094) Dehalococcoides mccartyi BAV1 5131145 YP_001213885.1 CDS DehaBAV1_0422 NC_009455.1 430211 430570 R TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-acyl-carrier-protein synthase complement(430211..430570) Dehalococcoides mccartyi BAV1 5131170 YP_001213886.1 CDS DehaBAV1_0423 NC_009455.1 430612 431076 R PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit complement(430612..431076) Dehalococcoides mccartyi BAV1 5131157 YP_001213887.1 CDS DehaBAV1_0424 NC_009455.1 431313 432863 D PFAM: carboxyl transferase; carboxyl transferase 431313..432863 Dehalococcoides mccartyi BAV1 5131792 YP_001213888.1 CDS DehaBAV1_0425 NC_009455.1 432844 434139 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 432844..434139 Dehalococcoides mccartyi BAV1 5131781 YP_001213889.1 CDS leuD NC_009455.1 434139 434642 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 434139..434642 Dehalococcoides mccartyi BAV1 5131757 YP_001213890.1 CDS DehaBAV1_0427 NC_009455.1 434657 435736 D PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase (NADP) 434657..435736 Dehalococcoides mccartyi BAV1 5131226 YP_001213891.1 CDS DehaBAV1_0428 NC_009455.1 435816 436739 D Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 435816..436739 Dehalococcoides mccartyi BAV1 5131156 YP_001213892.1 CDS DehaBAV1_0429 NC_009455.1 436762 437133 D hypothetical protein 436762..437133 Dehalococcoides mccartyi BAV1 5131185 YP_001213893.1 CDS DehaBAV1_0430 NC_009455.1 437134 437976 D Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 437134..437976 Dehalococcoides mccartyi BAV1 5131766 YP_001213894.1 CDS DehaBAV1_0431 NC_009455.1 437976 438545 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta 437976..438545 Dehalococcoides mccartyi BAV1 5131186 YP_001213895.1 CDS DehaBAV1_0432 NC_009455.1 438547 438888 D PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 438547..438888 Dehalococcoides mccartyi BAV1 5131209 YP_001213896.1 CDS DehaBAV1_0433 NC_009455.1 438885 439415 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(438885..439415) Dehalococcoides mccartyi BAV1 5131780 YP_001213897.1 CDS DehaBAV1_0434 NC_009455.1 439432 439908 R catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase complement(439432..439908) Dehalococcoides mccartyi BAV1 5131154 YP_001213898.1 CDS DehaBAV1_0435 NC_009455.1 439892 440746 R PFAM: ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase complement(439892..440746) Dehalococcoides mccartyi BAV1 5131830 YP_001213899.1 CDS DehaBAV1_0436 NC_009455.1 440818 441141 R hypothetical protein complement(440818..441141) Dehalococcoides mccartyi BAV1 5131763 YP_001213900.1 CDS DehaBAV1_0437 NC_009455.1 441231 442097 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(441231..442097) Dehalococcoides mccartyi BAV1 5131773 YP_001213901.1 CDS DehaBAV1_0438 NC_009455.1 442094 443170 R PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; prephenate dehydratase / chorismate mutase complement(442094..443170) Dehalococcoides mccartyi BAV1 5131793 YP_001213902.1 CDS DehaBAV1_0439 NC_009455.1 443167 444261 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(443167..444261) Dehalococcoides mccartyi BAV1 5131122 YP_001213903.1 CDS DehaBAV1_0440 NC_009455.1 444254 445516 R TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase complement(444254..445516) Dehalococcoides mccartyi BAV1 5131115 YP_001213904.1 CDS DehaBAV1_0441 NC_009455.1 445497 446027 R PFAM: shikimate kinase; shikimate kinase complement(445497..446027) Dehalococcoides mccartyi BAV1 5131150 YP_001213905.1 CDS aroE NC_009455.1 446011 446871 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(446011..446871) Dehalococcoides mccartyi BAV1 5131197 YP_001213906.1 CDS DehaBAV1_0443 NC_009455.1 446855 447523 R TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase complement(446855..447523) Dehalococcoides mccartyi BAV1 5131143 YP_001213907.1 CDS aroB NC_009455.1 447520 448599 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(447520..448599) Dehalococcoides mccartyi BAV1 5131196 YP_001213908.1 CDS DehaBAV1_0445 NC_009455.1 448619 449674 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase complement(448619..449674) Dehalococcoides mccartyi BAV1 5131193 YP_001213909.1 CDS DehaBAV1_0446 NC_009455.1 449929 450048 D hypothetical protein 449929..450048 Dehalococcoides mccartyi BAV1 5131089 YP_001213910.1 CDS rpsL NC_009455.1 450195 450629 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 450195..450629 Dehalococcoides mccartyi BAV1 5131130 YP_001213911.1 CDS DehaBAV1_0448 NC_009455.1 450643 451113 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 450643..451113 Dehalococcoides mccartyi BAV1 5131195 YP_001213912.1 CDS DehaBAV1_0449 NC_009455.1 451169 453250 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 451169..453250 Dehalococcoides mccartyi BAV1 5131043 YP_001213913.1 CDS rpsJ NC_009455.1 453275 453583 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 453275..453583 Dehalococcoides mccartyi BAV1 5132327 YP_001213914.1 CDS rplC NC_009455.1 453592 454209 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 453592..454209 Dehalococcoides mccartyi BAV1 5131225 YP_001213915.1 CDS rplD NC_009455.1 454212 454844 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 454212..454844 Dehalococcoides mccartyi BAV1 5131205 YP_001213916.1 CDS rplW NC_009455.1 454857 455141 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 454857..455141 Dehalococcoides mccartyi BAV1 5131202 YP_001213917.1 CDS rplB NC_009455.1 455167 455991 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 455167..455991 Dehalococcoides mccartyi BAV1 5131208 YP_001213918.1 CDS rpsS NC_009455.1 455998 456279 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 455998..456279 Dehalococcoides mccartyi BAV1 5131198 YP_001213919.1 CDS rplV NC_009455.1 456310 456639 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 456310..456639 Dehalococcoides mccartyi BAV1 5131148 YP_001213920.1 CDS rpsC NC_009455.1 456648 457484 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 456648..457484 Dehalococcoides mccartyi BAV1 5131032 YP_001213921.1 CDS rplP NC_009455.1 457486 457935 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 457486..457935 Dehalococcoides mccartyi BAV1 5131188 YP_001213922.1 CDS DehaBAV1_0459 NC_009455.1 457937 458134 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 457937..458134 Dehalococcoides mccartyi BAV1 5131963 YP_001213923.1 CDS rpsQ NC_009455.1 458142 458414 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 458142..458414 Dehalococcoides mccartyi BAV1 5131219 YP_001213924.1 CDS rplN NC_009455.1 458430 458798 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 458430..458798 Dehalococcoides mccartyi BAV1 5131228 YP_001213925.1 CDS rplX NC_009455.1 458809 459120 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 458809..459120 Dehalococcoides mccartyi BAV1 5131223 YP_001213926.1 CDS rplE NC_009455.1 459120 459659 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 459120..459659 Dehalococcoides mccartyi BAV1 5131214 YP_001213927.1 CDS rpsN NC_009455.1 459668 459853 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 459668..459853 Dehalococcoides mccartyi BAV1 5131199 YP_001213928.1 CDS rpsH NC_009455.1 459887 460282 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 459887..460282 Dehalococcoides mccartyi BAV1 5131194 YP_001213929.1 CDS rplF NC_009455.1 460298 460846 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 460298..460846 Dehalococcoides mccartyi BAV1 5131159 YP_001213930.1 CDS rplR NC_009455.1 460846 461211 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 460846..461211 Dehalococcoides mccartyi BAV1 5131138 YP_001213931.1 CDS rpsE NC_009455.1 461228 461746 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 461228..461746 Dehalococcoides mccartyi BAV1 5131192 YP_001213932.1 CDS rpmD NC_009455.1 461739 461921 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 461739..461921 Dehalococcoides mccartyi BAV1 5131091 YP_001213933.1 CDS rplO NC_009455.1 461921 462382 D late assembly protein; 50S ribosomal protein L15 461921..462382 Dehalococcoides mccartyi BAV1 5131200 YP_001213934.1 CDS secY NC_009455.1 462363 463679 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 462363..463679 Dehalococcoides mccartyi BAV1 5131190 YP_001213935.1 CDS DehaBAV1_0472 NC_009455.1 463689 464339 D PFAM: adenylate kinase; adenylate kinase 463689..464339 Dehalococcoides mccartyi BAV1 5131903 YP_001213936.1 CDS DehaBAV1_0473 NC_009455.1 464347 465102 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 464347..465102 Dehalococcoides mccartyi BAV1 5131892 YP_001213937.1 CDS infA NC_009455.1 465112 465333 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 465112..465333 Dehalococcoides mccartyi BAV1 5131908 YP_001213938.1 CDS rpmJ NC_009455.1 465362 465475 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 465362..465475 Dehalococcoides mccartyi BAV1 5131885 YP_001213939.1 CDS rpsM NC_009455.1 465485 465874 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 465485..465874 Dehalococcoides mccartyi BAV1 5131825 YP_001213940.1 CDS DehaBAV1_0477 NC_009455.1 465900 466292 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 465900..466292 Dehalococcoides mccartyi BAV1 5132346 YP_001213941.1 CDS rpsD NC_009455.1 466332 466925 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 466332..466925 Dehalococcoides mccartyi BAV1 5131764 YP_001213942.1 CDS DehaBAV1_0479 NC_009455.1 466946 467938 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 466946..467938 Dehalococcoides mccartyi BAV1 5131834 YP_001213943.1 CDS rplQ NC_009455.1 467969 468322 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 467969..468322 Dehalococcoides mccartyi BAV1 5131801 YP_001213944.1 CDS DehaBAV1_0481 NC_009455.1 468359 469099 D TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A 468359..469099 Dehalococcoides mccartyi BAV1 5131788 YP_001213945.1 CDS rplM NC_009455.1 469101 469532 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 469101..469532 Dehalococcoides mccartyi BAV1 5131821 YP_001213946.1 CDS rpsI NC_009455.1 469545 469943 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 469545..469943 Dehalococcoides mccartyi BAV1 5131238 YP_001213947.1 CDS DehaBAV1_0484 NC_009455.1 470019 470213 R hypothetical protein complement(470019..470213) Dehalococcoides mccartyi BAV1 5131263 YP_001213948.1 CDS DehaBAV1_0485 NC_009455.1 470610 471677 R catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate; bifunctional phosphoglucose/phosphomannose isomerase complement(470610..471677) Dehalococcoides mccartyi BAV1 5131250 YP_001213949.1 CDS DehaBAV1_0486 NC_009455.1 471702 472946 R PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphomannomutase complement(471702..472946) Dehalococcoides mccartyi BAV1 5131271 YP_001213950.1 CDS DehaBAV1_0487 NC_009455.1 473113 473316 R hypothetical protein complement(473113..473316) Dehalococcoides mccartyi BAV1 5131261 YP_001213951.1 CDS DehaBAV1_0488 NC_009455.1 473347 474567 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(473347..474567) Dehalococcoides mccartyi BAV1 5131253 YP_001213952.1 CDS DehaBAV1_0489 NC_009455.1 474577 475833 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(474577..475833) Dehalococcoides mccartyi BAV1 5131260 YP_001213953.1 CDS DehaBAV1_0490 NC_009455.1 475841 477403 R hypothetical protein complement(475841..477403) Dehalococcoides mccartyi BAV1 5131266 YP_001213954.1 CDS DehaBAV1_0491 NC_009455.1 477403 477603 R hypothetical protein complement(477403..477603) Dehalococcoides mccartyi BAV1 5131262 YP_001213955.1 CDS DehaBAV1_0492 NC_009455.1 477600 478631 R hypothetical protein complement(477600..478631) Dehalococcoides mccartyi BAV1 5131282 YP_001213956.1 CDS DehaBAV1_0493 NC_009455.1 478624 479508 R TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase, family 2; methylthioadenosine phosphorylase complement(478624..479508) Dehalococcoides mccartyi BAV1 5131243 YP_001213957.1 CDS DehaBAV1_0494 NC_009455.1 479583 480581 R TIGRFAM: putative translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor 2B subunit I complement(479583..480581) Dehalococcoides mccartyi BAV1 5131242 YP_001213958.1 CDS DehaBAV1_0495 NC_009455.1 480583 481680 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(480583..481680) Dehalococcoides mccartyi BAV1 5131275 YP_001213959.1 CDS DehaBAV1_0496 NC_009455.1 481677 482627 R TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; daunorubicin resistance ABC transporter ATPase subunit complement(481677..482627) Dehalococcoides mccartyi BAV1 5131899 YP_001213960.1 CDS DehaBAV1_0497 NC_009455.1 482721 483143 D hypothetical protein 482721..483143 Dehalococcoides mccartyi BAV1 5131870 YP_001213961.1 CDS DehaBAV1_0498 NC_009455.1 483140 483553 D PFAM: MaoC domain protein dehydratase; dehydratase 483140..483553 Dehalococcoides mccartyi BAV1 5131884 YP_001213962.1 CDS DehaBAV1_0499 NC_009455.1 483540 484100 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(483540..484100) Dehalococcoides mccartyi BAV1 5131910 YP_001213963.1 CDS DehaBAV1_0500 NC_009455.1 484104 485054 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; heat domain-containing protein complement(484104..485054) Dehalococcoides mccartyi BAV1 5131939 YP_001213964.1 CDS DehaBAV1_0501 NC_009455.1 485054 485884 R PFAM: protein of unknown function DUF75; hypothetical protein complement(485054..485884) Dehalococcoides mccartyi BAV1 5131897 YP_001213965.1 CDS DehaBAV1_0502 NC_009455.1 485898 487199 R PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase complement(485898..487199) Dehalococcoides mccartyi BAV1 5131927 YP_001213966.1 CDS DehaBAV1_0503 NC_009455.1 487201 488577 R PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase complement(487201..488577) Dehalococcoides mccartyi BAV1 5131856 YP_001213967.1 CDS DehaBAV1_0504 NC_009455.1 488715 490007 D PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucosamine mutase 488715..490007 Dehalococcoides mccartyi BAV1 5131895 YP_001213968.1 CDS DehaBAV1_0505 NC_009455.1 490009 491211 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase 490009..491211 Dehalococcoides mccartyi BAV1 5131914 YP_001213969.1 CDS DehaBAV1_0506 NC_009455.1 491229 492410 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase 491229..492410 Dehalococcoides mccartyi BAV1 5131913 YP_001213970.1 CDS DehaBAV1_0507 NC_009455.1 492411 494192 D TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); glutamine--fructose-6-phosphate transaminase 492411..494192 Dehalococcoides mccartyi BAV1 5131290 YP_001213971.1 CDS DehaBAV1_0508 NC_009455.1 494200 494652 R PFAM: PEBP family protein; PBP family phospholipid-binding protein complement(494200..494652) Dehalococcoides mccartyi BAV1 5131874 YP_001213972.1 CDS DehaBAV1_0509 NC_009455.1 494664 495368 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(494664..495368) Dehalococcoides mccartyi BAV1 5131916 YP_001213973.1 CDS DehaBAV1_0510 NC_009455.1 495507 496811 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 495507..496811 Dehalococcoides mccartyi BAV1 5131926 YP_001213974.1 CDS DehaBAV1_0511 NC_009455.1 496825 497856 D DNA polymerase III, delta prime subunit 496825..497856 Dehalococcoides mccartyi BAV1 5131924 YP_001213975.1 CDS DehaBAV1_0512 NC_009455.1 497849 498682 D PFAM: PSP1 domain protein; PSP1 domain-containing protein 497849..498682 Dehalococcoides mccartyi BAV1 5131925 YP_001213976.1 CDS DehaBAV1_0513 NC_009455.1 498671 499201 R PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(498671..499201) Dehalococcoides mccartyi BAV1 5131917 YP_001213977.1 CDS DehaBAV1_0514 NC_009455.1 499273 500682 R PFAM: IstB domain protein ATP-binding protein; Chromosomal replication initiator, DnaA; SMART: AAA ATPase; IstB ATP binding domain-containing protein complement(499273..500682) Dehalococcoides mccartyi BAV1 5131099 YP_001213978.1 CDS DehaBAV1_0515 NC_009455.1 500606 501316 R TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; primosome subunit DnaD complement(500606..501316) Dehalococcoides mccartyi BAV1 5131774 YP_001213979.1 CDS DehaBAV1_0516 NC_009455.1 501313 502689 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase; primary replicative DNA helicase complement(501313..502689) Dehalococcoides mccartyi BAV1 5131889 YP_001213980.1 CDS rplI NC_009455.1 502690 503145 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(502690..503145) Dehalococcoides mccartyi BAV1 5131877 YP_001213981.1 CDS DehaBAV1_0518 NC_009455.1 503215 504135 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; thioredoxin reductase complement(503215..504135) Dehalococcoides mccartyi BAV1 5131136 YP_001213982.1 CDS DehaBAV1_0519 NC_009455.1 504116 505159 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(504116..505159) Dehalococcoides mccartyi BAV1 5131826 YP_001213983.1 CDS DehaBAV1_0520 NC_009455.1 505199 506050 R TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; putative CoA-substrate-specific enzyme activase complement(505199..506050) Dehalococcoides mccartyi BAV1 5131248 YP_001213984.1 CDS DehaBAV1_0521 NC_009455.1 506076 507269 R TIGRFAM: amidohydrolase; PFAM: peptidase M20; amidohydrolase complement(506076..507269) Dehalococcoides mccartyi BAV1 5131160 YP_001213985.1 CDS DehaBAV1_0522 NC_009455.1 507483 510317 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 507483..510317 Dehalococcoides mccartyi BAV1 5131117 YP_001213986.1 CDS DehaBAV1_0523 NC_009455.1 510391 510942 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 510391..510942 Dehalococcoides mccartyi BAV1 5131847 YP_001213987.1 CDS DehaBAV1_0524 NC_009455.1 511051 511254 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 511051..511254 Dehalococcoides mccartyi BAV1 5131173 YP_001213988.1 CDS DehaBAV1_0525 NC_009455.1 511251 513830 R PFAM: SMC domain protein; SMC domain-containing protein complement(511251..513830) Dehalococcoides mccartyi BAV1 5131191 YP_001213989.1 CDS DehaBAV1_0526 NC_009455.1 514001 515563 R TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: Bacterio-opsin activator, HTH domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor complement(514001..515563) Dehalococcoides mccartyi BAV1 5131164 YP_001213990.1 CDS DehaBAV1_0527 NC_009455.1 515564 517330 R TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase complement(515564..517330) Dehalococcoides mccartyi BAV1 5131229 YP_001213991.1 CDS DehaBAV1_0528 NC_009455.1 517332 518369 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(517332..518369) Dehalococcoides mccartyi BAV1 5131203 YP_001213992.1 CDS DehaBAV1_0529 NC_009455.1 518366 520642 R TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; phosphoenolpyruvate synthase complement(518366..520642) Dehalococcoides mccartyi BAV1 5131212 YP_001213993.1 CDS DehaBAV1_0530 NC_009455.1 520940 521509 D PFAM: protein of unknown function DUF151; hypothetical protein 520940..521509 Dehalococcoides mccartyi BAV1 5131084 YP_001213994.1 CDS DehaBAV1_0531 NC_009455.1 521567 521800 D hypothetical protein 521567..521800 Dehalococcoides mccartyi BAV1 5131110 YP_001213995.1 CDS DehaBAV1_0532 NC_009455.1 521803 522747 D TIGRFAM: ATP synthase F0, A subunit; PFAM: H+-transporting two-sector ATPase, A subunit; ATP synthase F0 subunit A 521803..522747 Dehalococcoides mccartyi BAV1 5131168 YP_001213996.1 CDS DehaBAV1_0533 NC_009455.1 522788 523018 D TIGRFAM: ATP synthase F0, C subunit; PFAM: H+-transporting two-sector ATPase, C subunit; ATP synthase F0 subunit C 522788..523018 Dehalococcoides mccartyi BAV1 5131140 YP_001213997.1 CDS DehaBAV1_0534 NC_009455.1 523043 523552 D TIGRFAM: ATP synthase F0, B subunit; PFAM: H+-transporting two-sector ATPase, B/B' subunit; ATP synthase F0 subunit B 523043..523552 Dehalococcoides mccartyi BAV1 5132079 YP_001213998.1 CDS DehaBAV1_0535 NC_009455.1 523573 524115 D produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 523573..524115 Dehalococcoides mccartyi BAV1 5131411 YP_001213999.1 CDS DehaBAV1_0536 NC_009455.1 524138 525649 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 524138..525649 Dehalococcoides mccartyi BAV1 5132058 YP_001214000.1 CDS DehaBAV1_0537 NC_009455.1 525674 526531 D TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+-transporting two-sector ATPase, gamma subunit; ATP synthase F1 subunit gamma 525674..526531 Dehalococcoides mccartyi BAV1 5131480 YP_001214001.1 CDS DehaBAV1_0538 NC_009455.1 526547 527941 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 526547..527941 Dehalococcoides mccartyi BAV1 5131485 YP_001214002.1 CDS atpC NC_009455.1 527966 528388 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 527966..528388 Dehalococcoides mccartyi BAV1 5131568 YP_001214003.1 CDS DehaBAV1_0540 NC_009455.1 528463 528963 R TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM complement(528463..528963) Dehalococcoides mccartyi BAV1 5131574 YP_001214004.1 CDS DehaBAV1_0541 NC_009455.1 529051 529278 R RNA-binding protein complement(529051..529278) Dehalococcoides mccartyi BAV1 5132399 YP_001214005.1 CDS rpsP NC_009455.1 529294 529542 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(529294..529542) Dehalococcoides mccartyi BAV1 5131570 YP_001214006.1 CDS DehaBAV1_0543 NC_009455.1 529687 530358 D PFAM: Endonuclease V; endonuclease V 529687..530358 Dehalococcoides mccartyi BAV1 5131583 YP_001214007.1 CDS DehaBAV1_0544 NC_009455.1 530485 531555 D TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 530485..531555 Dehalococcoides mccartyi BAV1 5132122 YP_001214008.1 CDS DehaBAV1_0545 NC_009455.1 531555 532781 D hypothetical protein 531555..532781 Dehalococcoides mccartyi BAV1 5132118 YP_001214009.1 CDS DehaBAV1_0546 NC_009455.1 532765 533451 D PFAM: DNA repair protein RadC; DNA repair protein RadC 532765..533451 Dehalococcoides mccartyi BAV1 5132204 YP_001214010.1 CDS DehaBAV1_0547 NC_009455.1 533451 535046 D PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein 533451..535046 Dehalococcoides mccartyi BAV1 5132130 YP_001214011.1 CDS DehaBAV1_0548 NC_009455.1 535524 535883 R hypothetical protein complement(535524..535883) Dehalococcoides mccartyi BAV1 5132100 YP_001214012.1 CDS DehaBAV1_0549 NC_009455.1 536065 537207 R PFAM: aminotransferase, class I and II; aminotransferase complement(536065..537207) Dehalococcoides mccartyi BAV1 5131759 YP_001214013.1 CDS DehaBAV1_0550 NC_009455.1 537223 538464 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(537223..538464) Dehalococcoides mccartyi BAV1 5131725 YP_001214014.1 CDS lysS NC_009455.1 538496 539992 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(538496..539992) Dehalococcoides mccartyi BAV1 5131755 YP_001214015.1 CDS DehaBAV1_0552 NC_009455.1 540168 540401 D hypothetical protein 540168..540401 Dehalococcoides mccartyi BAV1 5131699 YP_001214016.1 CDS DehaBAV1_0553 NC_009455.1 540415 541176 R TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA repair protein RecO complement(540415..541176) Dehalococcoides mccartyi BAV1 5131730 YP_001214017.1 CDS DehaBAV1_0554 NC_009455.1 541177 541272 R hypothetical protein complement(541177..541272) Dehalococcoides mccartyi BAV1 5132315 YP_001214018.1 CDS DehaBAV1_0555 NC_009455.1 541275 541997 R DNA alkylation repair enzyme-like protein complement(541275..541997) Dehalococcoides mccartyi BAV1 5132367 YP_001214019.1 CDS DehaBAV1_0556 NC_009455.1 541999 543063 R TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; magnesium and cobalt transport protein CorA complement(541999..543063) Dehalococcoides mccartyi BAV1 5131718 YP_001214020.1 CDS recR NC_009455.1 543102 543716 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(543102..543716) Dehalococcoides mccartyi BAV1 5132278 YP_001214021.1 CDS DehaBAV1_0558 NC_009455.1 543738 544031 R PFAM: conserved hypothetical protein 103; hypothetical protein complement(543738..544031) Dehalococcoides mccartyi BAV1 5132311 YP_001214022.1 CDS DehaBAV1_0559 NC_009455.1 544047 545759 R TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(544047..545759) Dehalococcoides mccartyi BAV1 5132350 YP_001214023.1 CDS DehaBAV1_0560 NC_009455.1 545860 546111 R hypothetical protein complement(545860..546111) Dehalococcoides mccartyi BAV1 5132348 YP_001214024.1 CDS DehaBAV1_0561 NC_009455.1 546142 546564 R hypothetical protein complement(546142..546564) Dehalococcoides mccartyi BAV1 5132330 YP_001214025.1 CDS DehaBAV1_0562 NC_009455.1 546580 546864 R hypothetical protein complement(546580..546864) Dehalococcoides mccartyi BAV1 5132306 YP_001214026.1 CDS DehaBAV1_0563 NC_009455.1 546864 547238 R hypothetical protein complement(546864..547238) Dehalococcoides mccartyi BAV1 5131705 YP_001214027.1 CDS DehaBAV1_0564 NC_009455.1 547445 548623 R PFAM: Tubulin/FtsZ, GTPase; twin-arginine translocating C- subunit complement(547445..548623) Dehalococcoides mccartyi BAV1 5131587 YP_001214028.1 CDS DehaBAV1_0565 NC_009455.1 548711 549718 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(548711..549718) Dehalococcoides mccartyi BAV1 5131577 YP_001214029.1 CDS DehaBAV1_0566 NC_009455.1 549740 550759 R PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D complement(549740..550759) Dehalococcoides mccartyi BAV1 5131555 YP_001214030.1 CDS DehaBAV1_0567 NC_009455.1 550756 551574 R hypothetical protein complement(550756..551574) Dehalococcoides mccartyi BAV1 5131507 YP_001214031.1 CDS eno NC_009455.1 551590 552876 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(551590..552876) Dehalococcoides mccartyi BAV1 5131504 YP_001214032.1 CDS DehaBAV1_0569 NC_009455.1 552895 553383 R Rossmann fold nucleotide-binding protein-like protein complement(552895..553383) Dehalococcoides mccartyi BAV1 5131489 YP_001214033.1 CDS DehaBAV1_0570 NC_009455.1 553422 553991 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(553422..553991) Dehalococcoides mccartyi BAV1 5131083 YP_001214034.1 CDS DehaBAV1_0571 NC_009455.1 553991 556033 R TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like; NAD-dependent DNA ligase complement(553991..556033) Dehalococcoides mccartyi BAV1 5131949 YP_001214035.1 CDS DehaBAV1_0572 NC_009455.1 556169 557497 D PFAM: uncharacterised conserved protein UCP033563; hypothetical protein 556169..557497 Dehalococcoides mccartyi BAV1 5131907 YP_001214036.1 CDS DehaBAV1_0573 NC_009455.1 557568 558155 R with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT complement(557568..558155) Dehalococcoides mccartyi BAV1 5131376 YP_001214037.1 CDS DehaBAV1_0574 NC_009455.1 558230 559810 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(558230..559810) Dehalococcoides mccartyi BAV1 5131288 YP_001214038.1 CDS DehaBAV1_0575 NC_009455.1 559812 560900 R PFAM: aminotransferase, class V; phosphoserine aminotransferase / L-aspartate aminotransferase complement(559812..560900) Dehalococcoides mccartyi BAV1 5131313 YP_001214039.1 CDS DehaBAV1_0576 NC_009455.1 560960 562150 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(560960..562150) Dehalococcoides mccartyi BAV1 5132177 YP_001214040.1 CDS DehaBAV1_0577 NC_009455.1 562157 563074 R TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; riboflavin kinase/FMN adenylyltransferase complement(562157..563074) Dehalococcoides mccartyi BAV1 5131973 YP_001214041.1 CDS rpoB NC_009455.1 563580 567302 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 563580..567302 Dehalococcoides mccartyi BAV1 5131252 YP_001214042.1 CDS DehaBAV1_0579 NC_009455.1 567403 571176 D TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 567403..571176 Dehalococcoides mccartyi BAV1 5131307 YP_001214043.1 CDS ruvB NC_009455.1 571383 572432 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 571383..572432 Dehalococcoides mccartyi BAV1 5131255 YP_001214044.1 CDS DehaBAV1_0581 NC_009455.1 572422 572970 D PFAM: protein of unknown function DUF208; hypothetical protein 572422..572970 Dehalococcoides mccartyi BAV1 5131938 YP_001214045.1 CDS DehaBAV1_0582 NC_009455.1 573047 573688 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 573047..573688 Dehalococcoides mccartyi BAV1 5131893 YP_001214046.1 CDS DehaBAV1_0583 NC_009455.1 573705 573932 R hypothetical protein complement(573705..573932) Dehalococcoides mccartyi BAV1 5131894 YP_001214047.1 CDS DehaBAV1_0584 NC_009455.1 573997 574536 R hypothetical protein complement(573997..574536) Dehalococcoides mccartyi BAV1 5131838 YP_001214048.1 CDS DehaBAV1_0585 NC_009455.1 574565 575239 R PFAM: Methyltransferase type 11; Methyltransferase type 12; methyltransferase type 11 complement(574565..575239) Dehalococcoides mccartyi BAV1 5131811 YP_001214049.1 CDS DehaBAV1_0586 NC_009455.1 575283 576662 D TIGRFAM: histone acetyltransferase, ELP3 family; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; ELP3 family histone acetyltransferase 575283..576662 Dehalococcoides mccartyi BAV1 5132423 YP_001214050.1 CDS DehaBAV1_0587 NC_009455.1 576878 577816 D PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; F420-non-reducing hydrogenase subunit G 576878..577816 Dehalococcoides mccartyi BAV1 5131862 YP_001214051.1 CDS DehaBAV1_0588 NC_009455.1 577848 579287 D PFAM: nickel-dependent hydrogenase, large subunit; F420-non-reducing hydrogenase subunit A 577848..579287 Dehalococcoides mccartyi BAV1 5131835 YP_001214052.1 CDS DehaBAV1_0589 NC_009455.1 579290 579793 D TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 579290..579793 Dehalococcoides mccartyi BAV1 5131842 YP_001214053.1 CDS DehaBAV1_0590 NC_009455.1 579790 580095 R hypothetical protein complement(579790..580095) Dehalococcoides mccartyi BAV1 5131785 YP_001214054.1 CDS DehaBAV1_0591 NC_009455.1 580113 580652 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(580113..580652) Dehalococcoides mccartyi BAV1 5131819 YP_001214055.1 CDS DehaBAV1_0592 NC_009455.1 580654 581376 R PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region complement(580654..581376) Dehalococcoides mccartyi BAV1 5132433 YP_001214056.1 CDS DehaBAV1_0593 NC_009455.1 581439 582578 D exonuclease-like protein 581439..582578 Dehalococcoides mccartyi BAV1 5131765 YP_001214057.1 CDS DehaBAV1_0594 NC_009455.1 582599 583087 D hypothetical protein 582599..583087 Dehalococcoides mccartyi BAV1 5131760 YP_001214058.1 CDS DehaBAV1_0595 NC_009455.1 583285 584034 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 583285..584034 Dehalococcoides mccartyi BAV1 5132440 YP_001214059.1 CDS DehaBAV1_0596 NC_009455.1 584035 585834 D TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit, N terminal domain protein; ribonucleoside-diphosphate reductase 584035..585834 Dehalococcoides mccartyi BAV1 5131144 YP_001214060.1 CDS DehaBAV1_0597 NC_009455.1 585831 586835 R TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; HDOD; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase complement(585831..586835) Dehalococcoides mccartyi BAV1 5132352 YP_001214061.1 CDS DehaBAV1_0598 NC_009455.1 586865 589423 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(586865..589423) Dehalococcoides mccartyi BAV1 5131901 YP_001214062.1 CDS DehaBAV1_0599 NC_009455.1 589599 589940 R PFAM: protein of unknown function UPF0153; hypothetical protein complement(589599..589940) Dehalococcoides mccartyi BAV1 5131896 YP_001214063.1 CDS DehaBAV1_0600 NC_009455.1 590013 591278 D hypothetical protein 590013..591278 Dehalococcoides mccartyi BAV1 5131876 YP_001214064.1 CDS DehaBAV1_0601 NC_009455.1 591420 592739 D TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; L-lysine 2,3-aminomutase 591420..592739 Dehalococcoides mccartyi BAV1 5131887 YP_001214065.1 CDS DehaBAV1_0602 NC_009455.1 592711 593727 D PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 592711..593727 Dehalococcoides mccartyi BAV1 5131883 YP_001214066.1 CDS DehaBAV1_0603 NC_009455.1 593858 594289 D PFAM: ferric-uptake regulator; ferric uptake regulator family protein 593858..594289 Dehalococcoides mccartyi BAV1 5131864 YP_001214067.1 CDS DehaBAV1_0604 NC_009455.1 594286 595158 D PFAM: periplasmic solute binding protein; periplasmic solute binding protein 594286..595158 Dehalococcoides mccartyi BAV1 5131270 YP_001214068.1 CDS DehaBAV1_0605 NC_009455.1 595161 595925 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 595161..595925 Dehalococcoides mccartyi BAV1 5131855 YP_001214069.1 CDS DehaBAV1_0606 NC_009455.1 595922 596767 D PFAM: ABC-3 protein; ABC-3 protein 595922..596767 Dehalococcoides mccartyi BAV1 5131968 YP_001214070.1 CDS DehaBAV1_0607 NC_009455.1 596791 597141 R hypothetical protein complement(596791..597141) Dehalococcoides mccartyi BAV1 5131187 YP_001214071.1 CDS DehaBAV1_0608 NC_009455.1 597257 598387 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(597257..598387) Dehalococcoides mccartyi BAV1 5131167 YP_001214072.1 CDS DehaBAV1_0609 NC_009455.1 598420 599622 R PFAM: cell division protein FtsA; cell division protein FtsA complement(598420..599622) Dehalococcoides mccartyi BAV1 5131869 YP_001214073.1 CDS DehaBAV1_0610 NC_009455.1 599680 599889 R hypothetical protein complement(599680..599889) Dehalococcoides mccartyi BAV1 5131882 YP_001214074.1 CDS DehaBAV1_0611 NC_009455.1 600128 600817 D hypothetical protein 600128..600817 Dehalococcoides mccartyi BAV1 5131791 YP_001214075.1 CDS DehaBAV1_0612 NC_009455.1 600974 601837 D PFAM: UspA domain protein; UspA domain-containing protein 600974..601837 Dehalococcoides mccartyi BAV1 5131886 YP_001214076.1 CDS DehaBAV1_0613 NC_009455.1 601891 602520 D PFAM: cyclase family protein; cyclase family protein 601891..602520 Dehalococcoides mccartyi BAV1 5131784 YP_001214077.1 CDS DehaBAV1_0614 NC_009455.1 602521 603183 D PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 602521..603183 Dehalococcoides mccartyi BAV1 5131743 YP_001214078.1 CDS DehaBAV1_0615 NC_009455.1 603180 603638 R catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B complement(603180..603638) Dehalococcoides mccartyi BAV1 5131758 YP_001214079.1 CDS DehaBAV1_0616 NC_009455.1 603631 605631 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase complement(603631..605631) Dehalococcoides mccartyi BAV1 5131116 YP_001214080.1 CDS DehaBAV1_0617 NC_009455.1 605683 606192 R PFAM: nitroreductase; nitroreductase complement(605683..606192) Dehalococcoides mccartyi BAV1 5131180 YP_001214081.1 CDS DehaBAV1_0618 NC_009455.1 606318 607160 D PFAM: Methyltransferase type 11; Methyltransferase type 12; methyltransferase type 12 606318..607160 Dehalococcoides mccartyi BAV1 5131149 YP_001214082.1 CDS DehaBAV1_0619 NC_009455.1 607302 607931 D hypothetical protein 607302..607931 Dehalococcoides mccartyi BAV1 5131747 YP_001214083.1 CDS DehaBAV1_0620 NC_009455.1 608537 609550 D PFAM: periplasmic binding protein; periplasmic binding protein 608537..609550 Dehalococcoides mccartyi BAV1 5131762 YP_001214084.1 CDS DehaBAV1_0621 NC_009455.1 609606 610697 D PFAM: transport system permease protein; ABC-3 protein; transport system permease 609606..610697 Dehalococcoides mccartyi BAV1 5132401 YP_001214085.1 CDS DehaBAV1_0622 NC_009455.1 610709 611536 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 610709..611536 Dehalococcoides mccartyi BAV1 5132273 YP_001214086.1 CDS DehaBAV1_0623 NC_009455.1 611526 612296 D PFAM: protein of unknown function DUF105; hypothetical protein 611526..612296 Dehalococcoides mccartyi BAV1 5132391 YP_001214087.1 CDS DehaBAV1_0624 NC_009455.1 612299 613225 D TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; adenosylcobinamide-phosphate synthase 612299..613225 Dehalococcoides mccartyi BAV1 5131141 YP_001214088.1 CDS DehaBAV1_0625 NC_009455.1 613209 614315 D PFAM: aminotransferase, class I and II; L-threonine O-3-phosphate decarboxylase 613209..614315 Dehalococcoides mccartyi BAV1 5131161 YP_001214089.1 CDS DehaBAV1_0626 NC_009455.1 614688 615746 D PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 614688..615746 Dehalococcoides mccartyi BAV1 5131269 YP_001214090.1 CDS DehaBAV1_0627 NC_009455.1 615786 616550 D TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin-5'-phosphate synthase 615786..616550 Dehalococcoides mccartyi BAV1 5131436 YP_001214091.1 CDS DehaBAV1_0628 NC_009455.1 616569 617171 D PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 616569..617171 Dehalococcoides mccartyi BAV1 5131327 YP_001214092.1 CDS DehaBAV1_0629 NC_009455.1 617224 617790 D PFAM: cobalbumin biosynthesis enzyme; adenosylcobinamide kinase 617224..617790 Dehalococcoides mccartyi BAV1 5131045 YP_001214093.1 CDS DehaBAV1_0630 NC_009455.1 617866 618189 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(617866..618189) Dehalococcoides mccartyi BAV1 5131850 YP_001214094.1 CDS DehaBAV1_0631 NC_009455.1 618359 619504 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase complement(618359..619504) Dehalococcoides mccartyi BAV1 5131861 YP_001214095.1 CDS DehaBAV1_0632 NC_009455.1 619521 620195 R PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; two component LuxR family transcriptional regulator complement(619521..620195) Dehalococcoides mccartyi BAV1 5131852 YP_001214096.1 CDS DehaBAV1_0633 NC_009455.1 620265 620909 R hypothetical protein complement(620265..620909) Dehalococcoides mccartyi BAV1 5131839 YP_001214097.1 CDS DehaBAV1_0634 NC_009455.1 620941 622287 R part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit gamma complement(620941..622287) Dehalococcoides mccartyi BAV1 5131860 YP_001214098.1 CDS DehaBAV1_0635 NC_009455.1 622308 624509 R in acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta complement(622308..624509) Dehalococcoides mccartyi BAV1 5131859 YP_001214099.1 CDS DehaBAV1_0636 NC_009455.1 624569 625510 R part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit delta complement(624569..625510) Dehalococcoides mccartyi BAV1 5131778 YP_001214100.1 CDS DehaBAV1_0637 NC_009455.1 625546 626436 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(625546..626436) Dehalococcoides mccartyi BAV1 5131772 YP_001214101.1 CDS DehaBAV1_0638 NC_009455.1 626436 627218 R CO dehydrogenase maturation factor-like protein complement(626436..627218) Dehalococcoides mccartyi BAV1 5131783 YP_001214102.1 CDS DehaBAV1_0639 NC_009455.1 627215 629137 R PFAM: ferredoxin; ferredoxin complement(627215..629137) Dehalococcoides mccartyi BAV1 5131748 YP_001214103.1 CDS DehaBAV1_0640 NC_009455.1 629175 630992 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(629175..630992) Dehalococcoides mccartyi BAV1 5131863 YP_001214104.1 CDS DehaBAV1_0641 NC_009455.1 631099 631680 D hypothetical protein 631099..631680 Dehalococcoides mccartyi BAV1 5132332 YP_001214105.1 CDS DehaBAV1_0642 NC_009455.1 631799 631978 D hypothetical protein 631799..631978 Dehalococcoides mccartyi BAV1 5131841 YP_001214106.1 CDS aspS NC_009455.1 632055 633851 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 632055..633851 Dehalococcoides mccartyi BAV1 5131846 YP_001214107.1 CDS DehaBAV1_0644 NC_009455.1 633871 635214 D TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase, FKBP-type; trigger factor, C-terminal domain protein; trigger factor, N-terminal domain; trigger factor 633871..635214 Dehalococcoides mccartyi BAV1 5131844 YP_001214108.1 CDS clpP NC_009455.1 635211 635813 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 635211..635813 Dehalococcoides mccartyi BAV1 5132414 YP_001214109.1 CDS DehaBAV1_0646 NC_009455.1 635894 636880 R PFAM: PfkB domain protein; ribokinase-like domain-containing protein complement(635894..636880) Dehalococcoides mccartyi BAV1 5131880 YP_001214110.1 CDS DehaBAV1_0647 NC_009455.1 636882 637703 R folate-dependent phosphoribosylglycinamide formyltransferase PurN-like protein complement(636882..637703) Dehalococcoides mccartyi BAV1 5132382 YP_001214111.1 CDS DehaBAV1_0648 NC_009455.1 637706 638365 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein complement(637706..638365) Dehalococcoides mccartyi BAV1 5131061 YP_001214112.1 CDS DehaBAV1_0649 NC_009455.1 638368 638928 R TIGRFAM: translation elongation factor P; PFAM: Elongation factor P/YeiP protein; Elongation factor, KOW domain protein; translation elongation factor P (EF-P) complement(638368..638928) Dehalococcoides mccartyi BAV1 5131114 YP_001214113.1 CDS DehaBAV1_0650 NC_009455.1 638944 640035 R PFAM: creatinase; peptidase M24; peptidase M24 complement(638944..640035) Dehalococcoides mccartyi BAV1 5131087 YP_001214114.1 CDS DehaBAV1_0651 NC_009455.1 640032 640955 R TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; tyrosine recombinase XerC complement(640032..640955) Dehalococcoides mccartyi BAV1 5131070 YP_001214115.1 CDS DehaBAV1_0652 NC_009455.1 640956 643067 R TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DNA topoisomerase I complement(640956..643067) Dehalococcoides mccartyi BAV1 5131112 YP_001214116.1 CDS DehaBAV1_0653 NC_009455.1 643074 644195 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA complement(643074..644195) Dehalococcoides mccartyi BAV1 5131076 YP_001214117.1 CDS DehaBAV1_0654 NC_009455.1 644691 644885 D hypothetical protein 644691..644885 Dehalococcoides mccartyi BAV1 5132117 YP_001214118.1 CDS DehaBAV1_0655 NC_009455.1 644964 646238 D PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger 644964..646238 Dehalococcoides mccartyi BAV1 5131065 YP_001214119.1 CDS DehaBAV1_0656 NC_009455.1 646380 646952 D TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase subunit gamma 646380..646952 Dehalococcoides mccartyi BAV1 5132192 YP_001214120.1 CDS DehaBAV1_0657 NC_009455.1 646945 647241 D TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin oxidoreductase subunit delta 646945..647241 Dehalococcoides mccartyi BAV1 5131049 YP_001214121.1 CDS DehaBAV1_0658 NC_009455.1 647241 648413 D PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; pyruvate ferredoxin oxidoreductase subunit alpha 647241..648413 Dehalococcoides mccartyi BAV1 5132008 YP_001214122.1 CDS DehaBAV1_0659 NC_009455.1 648413 649354 D PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; pyruvate ferredoxin oxidoreductase subunit beta 648413..649354 Dehalococcoides mccartyi BAV1 5131320 YP_001214123.1 CDS DehaBAV1_0660 NC_009455.1 649330 649803 D PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit 649330..649803 Dehalococcoides mccartyi BAV1 5131975 YP_001214124.1 CDS DehaBAV1_0661 NC_009455.1 649803 651674 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) 649803..651674 Dehalococcoides mccartyi BAV1 5131514 YP_001214125.1 CDS DehaBAV1_0663 NC_009455.1 652634 653323 D PFAM: oxidoreductase, molybdopterin binding; oxidoreductase, molybdopterin binding 652634..653323 Dehalococcoides mccartyi BAV1 5132194 YP_001214126.1 CDS DehaBAV1_0664 NC_009455.1 653485 654954 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 653485..654954 Dehalococcoides mccartyi BAV1 5132416 YP_001214127.1 CDS DehaBAV1_0665 NC_009455.1 655214 655600 D TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 655214..655600 Dehalococcoides mccartyi BAV1 5132176 YP_001214128.1 CDS DehaBAV1_0666 NC_009455.1 655779 656576 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(655779..656576) Dehalococcoides mccartyi BAV1 5132240 YP_001214129.1 CDS DehaBAV1_0667 NC_009455.1 656721 657932 D PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein 656721..657932 Dehalococcoides mccartyi BAV1 5131322 YP_001214130.1 CDS DehaBAV1_0668 NC_009455.1 657936 658148 D hypothetical protein 657936..658148 Dehalococcoides mccartyi BAV1 5131344 YP_001214131.1 CDS DehaBAV1_0669 NC_009455.1 658776 659942 R catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis; LL-diaminopimelate aminotransferase complement(658776..659942) Dehalococcoides mccartyi BAV1 5131060 YP_001214132.1 CDS dapF NC_009455.1 659929 660783 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(659929..660783) Dehalococcoides mccartyi BAV1 5131183 YP_001214133.1 CDS DehaBAV1_0671 NC_009455.1 660770 661756 R TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(660770..661756) Dehalococcoides mccartyi BAV1 5132355 YP_001214134.1 CDS tpiA NC_009455.1 661818 662579 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(661818..662579) Dehalococcoides mccartyi BAV1 5132360 YP_001214135.1 CDS DehaBAV1_0673 NC_009455.1 662591 663796 R catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase complement(662591..663796) Dehalococcoides mccartyi BAV1 5132368 YP_001214136.1 CDS DehaBAV1_0674 NC_009455.1 663789 664982 R PFAM: phosphoglycerate kinase; phosphoglycerate kinase complement(663789..664982) Dehalococcoides mccartyi BAV1 5132384 YP_001214137.1 CDS DehaBAV1_0675 NC_009455.1 665082 666983 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(665082..666983) Dehalococcoides mccartyi BAV1 5131286 YP_001214138.1 CDS DehaBAV1_0676 NC_009455.1 667147 667698 D PFAM: putative small multi-drug export; putative small multi-drug export 667147..667698 Dehalococcoides mccartyi BAV1 5131042 YP_001214139.1 CDS DehaBAV1_0677 NC_009455.1 668208 669608 R TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; GAF domain protein; putative GAF sensor protein complement(668208..669608) Dehalococcoides mccartyi BAV1 5132200 YP_001214140.1 CDS rplT NC_009455.1 669721 670080 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(669721..670080) Dehalococcoides mccartyi BAV1 5131904 YP_001214141.1 CDS rpmI NC_009455.1 670099 670302 R PFAM: ribosomal protein L35; 50S ribosomal protein L35 complement(670099..670302) Dehalococcoides mccartyi BAV1 5132325 YP_001214142.1 CDS DehaBAV1_0680 NC_009455.1 670295 670768 R PFAM: initiation factor 3; translation initiation factor 3 complement(670295..670768) Dehalococcoides mccartyi BAV1 5132334 YP_001214143.1 CDS thrS NC_009455.1 670919 672667 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(670919..672667) Dehalococcoides mccartyi BAV1 5132305 YP_001214144.1 CDS DehaBAV1_0682 NC_009455.1 672793 675324 R hypothetical protein complement(672793..675324) Dehalococcoides mccartyi BAV1 5132338 YP_001214145.1 CDS DehaBAV1_0683 NC_009455.1 675466 676872 R hypothetical protein complement(675466..676872) Dehalococcoides mccartyi BAV1 5131987 YP_001214146.1 CDS DehaBAV1_0684 NC_009455.1 677558 677926 D hypothetical protein 677558..677926 Dehalococcoides mccartyi BAV1 5131722 YP_001214147.1 CDS DehaBAV1_0685 NC_009455.1 677937 678599 D PFAM: alanine racemase domain protein; alanine racemase domain-containing protein 677937..678599 Dehalococcoides mccartyi BAV1 5132006 YP_001214148.1 CDS DehaBAV1_0686 NC_009455.1 678596 679255 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase complement(678596..679255) Dehalococcoides mccartyi BAV1 5131797 YP_001214149.1 CDS def NC_009455.1 679279 679782 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(679279..679782) Dehalococcoides mccartyi BAV1 5132326 YP_001214150.1 CDS DehaBAV1_0688 NC_009455.1 680068 680871 R hypothetical protein complement(680068..680871) Dehalococcoides mccartyi BAV1 5132252 YP_001214151.1 CDS DehaBAV1_0689 NC_009455.1 680929 681330 R hypothetical protein complement(680929..681330) Dehalococcoides mccartyi BAV1 5132309 YP_001214152.1 CDS DehaBAV1_0690 NC_009455.1 681340 681999 R PFAM: dienelactone hydrolase; dienelactone hydrolase complement(681340..681999) Dehalococcoides mccartyi BAV1 5132228 YP_001214153.1 CDS DehaBAV1_0691 NC_009455.1 682212 682376 D hypothetical protein 682212..682376 Dehalococcoides mccartyi BAV1 5131709 YP_001214154.1 CDS hppA NC_009455.1 682448 684574 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(682448..684574) Dehalococcoides mccartyi BAV1 5131717 YP_001214155.1 CDS DehaBAV1_0693 NC_009455.1 684764 684994 D hypothetical protein 684764..684994 Dehalococcoides mccartyi BAV1 5132231 YP_001214156.1 CDS DehaBAV1_0694 NC_009455.1 685062 685391 R PFAM: protein of unknown function UPF0132; hypothetical protein complement(685062..685391) Dehalococcoides mccartyi BAV1 5131706 YP_001214157.1 CDS DehaBAV1_0695 NC_009455.1 685463 686602 R PFAM: CBS domain containing protein; peptidase M50; peptidase M50 complement(685463..686602) Dehalococcoides mccartyi BAV1 5131974 YP_001214158.1 CDS DehaBAV1_0696 NC_009455.1 686629 687429 R TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; transcription elongation factor GreA complement(686629..687429) Dehalococcoides mccartyi BAV1 5131417 YP_001214159.1 CDS DehaBAV1_0697 NC_009455.1 687460 688641 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(687460..688641) Dehalococcoides mccartyi BAV1 5131278 YP_001214160.1 CDS DehaBAV1_0698 NC_009455.1 688740 688976 D hypothetical protein 688740..688976 Dehalococcoides mccartyi BAV1 5131316 YP_001214161.1 CDS DehaBAV1_0699 NC_009455.1 688965 689705 R PFAM: Abortive infection protein; abortive infection protein complement(688965..689705) Dehalococcoides mccartyi BAV1 5131589 YP_001214162.1 CDS DehaBAV1_0700 NC_009455.1 689698 690810 R PFAM: peptidase M50; peptidase M50 complement(689698..690810) Dehalococcoides mccartyi BAV1 5131565 YP_001214163.1 CDS DehaBAV1_0701 NC_009455.1 690846 692141 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(690846..692141) Dehalococcoides mccartyi BAV1 5131525 YP_001214164.1 CDS gidB NC_009455.1 692306 693076 D glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 692306..693076 Dehalococcoides mccartyi BAV1 5131573 YP_001214165.1 CDS DehaBAV1_0703 NC_009455.1 693295 694824 D PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: AAA ATPase; single-stranded nucleic acid binding R3H domain-containing protein 693295..694824 Dehalococcoides mccartyi BAV1 5131535 YP_001214166.1 CDS DehaBAV1_0704 NC_009455.1 694827 695453 D PFAM: thymidylate kinase; thymidylate kinase 694827..695453 Dehalococcoides mccartyi BAV1 5131756 YP_001214167.1 CDS mnmA NC_009455.1 695434 696519 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 695434..696519 Dehalococcoides mccartyi BAV1 5131347 YP_001214168.1 CDS rnhB NC_009455.1 696521 697159 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 696521..697159 Dehalococcoides mccartyi BAV1 5131298 YP_001214169.1 CDS DehaBAV1_0707 NC_009455.1 697149 697514 D PFAM: protein of unknown function UPF0102; hypothetical protein 697149..697514 Dehalococcoides mccartyi BAV1 5131406 YP_001214170.1 CDS DehaBAV1_0708 NC_009455.1 697550 698608 D catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 697550..698608 Dehalococcoides mccartyi BAV1 5131462 YP_001214171.1 CDS DehaBAV1_0709 NC_009455.1 698601 699254 D PFAM: Translin; haloacid dehalogenase superfamily protein 698601..699254 Dehalococcoides mccartyi BAV1 5131488 YP_001214172.1 CDS hppA NC_009455.1 699259 701298 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 699259..701298 Dehalococcoides mccartyi BAV1 5131457 YP_001214173.1 CDS DehaBAV1_0711 NC_009455.1 701311 701964 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(701311..701964) Dehalococcoides mccartyi BAV1 5131474 YP_001214174.1 CDS DehaBAV1_0712 NC_009455.1 702035 702580 D hypothetical protein 702035..702580 Dehalococcoides mccartyi BAV1 5131293 YP_001214175.1 CDS DehaBAV1_0713 NC_009455.1 702587 703918 D Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 702587..703918 Dehalococcoides mccartyi BAV1 5131930 YP_001214176.1 CDS DehaBAV1_0714 NC_009455.1 703932 705179 D TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D 703932..705179 Dehalococcoides mccartyi BAV1 5131078 YP_001214177.1 CDS DehaBAV1_0715 NC_009455.1 705203 705952 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase B 705203..705952 Dehalococcoides mccartyi BAV1 5131719 YP_001214178.1 CDS DehaBAV1_0716 NC_009455.1 705945 706679 R PFAM: phosphoribosyltransferase; phosphoribosyltransferase complement(705945..706679) Dehalococcoides mccartyi BAV1 5131721 YP_001214179.1 CDS DehaBAV1_0717 NC_009455.1 706679 708394 R TIGRFAM: adenine deaminase; PFAM: amidohydrolase; adenine deaminase complement(706679..708394) Dehalococcoides mccartyi BAV1 5131724 YP_001214180.1 CDS DehaBAV1_0718 NC_009455.1 708378 708914 R TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(708378..708914) Dehalococcoides mccartyi BAV1 5131734 YP_001214181.1 CDS DehaBAV1_0719 NC_009455.1 709211 709876 D hypothetical protein 709211..709876 Dehalococcoides mccartyi BAV1 5131033 YP_001214182.1 CDS DehaBAV1_0720 NC_009455.1 709971 710888 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 709971..710888 Dehalococcoides mccartyi BAV1 5131948 YP_001214183.1 CDS DehaBAV1_0721 NC_009455.1 710885 711967 D PFAM: ABC-2 type transporter; ABC-2 type transporter 710885..711967 Dehalococcoides mccartyi BAV1 5132009 YP_001214184.1 CDS queA NC_009455.1 712050 713081 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(712050..713081) Dehalococcoides mccartyi BAV1 5131241 YP_001214185.1 CDS surE NC_009455.1 713244 714041 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 713244..714041 Dehalococcoides mccartyi BAV1 5131239 YP_001214186.1 CDS DehaBAV1_0724 NC_009455.1 714175 714729 D hypothetical protein 714175..714729 Dehalococcoides mccartyi BAV1 5132354 YP_001214187.1 CDS DehaBAV1_0725 NC_009455.1 714897 715754 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase, coenzyme F420-dependent 714897..715754 Dehalococcoides mccartyi BAV1 5131240 YP_001214188.1 CDS DehaBAV1_0726 NC_009455.1 715768 716151 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 715768..716151 Dehalococcoides mccartyi BAV1 5132045 YP_001214189.1 CDS panB NC_009455.1 716154 716993 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 716154..716993 Dehalococcoides mccartyi BAV1 5131353 YP_001214190.1 CDS panC NC_009455.1 716981 717814 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 716981..717814 Dehalococcoides mccartyi BAV1 5131465 YP_001214191.1 CDS DehaBAV1_0729 NC_009455.1 717811 719073 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(717811..719073) Dehalococcoides mccartyi BAV1 5131471 YP_001214192.1 CDS DehaBAV1_0730 NC_009455.1 719073 719372 R PFAM: transcriptional regulator PadR family protein; PadR family transcriptional regulator complement(719073..719372) Dehalococcoides mccartyi BAV1 5131482 YP_001214193.1 CDS DehaBAV1_0731 NC_009455.1 720035 721537 D phytoene dehydrogenase and related protein-like protein 720035..721537 Dehalococcoides mccartyi BAV1 5132274 YP_001214194.1 CDS DehaBAV1_0732 NC_009455.1 721534 722124 R hypothetical protein complement(721534..722124) Dehalococcoides mccartyi BAV1 5131475 YP_001214195.1 CDS DehaBAV1_0733 NC_009455.1 722341 723087 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 722341..723087 Dehalococcoides mccartyi BAV1 5131231 YP_001214196.1 CDS DehaBAV1_0734 NC_009455.1 723080 723805 D PFAM: ABC-2 type transporter; ABC-2 type transporter 723080..723805 Dehalococcoides mccartyi BAV1 5131233 YP_001214197.1 CDS DehaBAV1_0735 NC_009455.1 723905 724660 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 723905..724660 Dehalococcoides mccartyi BAV1 5131812 YP_001214198.1 CDS DehaBAV1_0736 NC_009455.1 724642 725877 D PFAM: SufBD protein; SufBD protein 724642..725877 Dehalococcoides mccartyi BAV1 5131256 YP_001214199.1 CDS DehaBAV1_0737 NC_009455.1 725946 726737 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(725946..726737) Dehalococcoides mccartyi BAV1 5132033 YP_001214200.1 CDS DehaBAV1_0738 NC_009455.1 727013 727666 R thymidylate synthase-like protein complement(727013..727666) Dehalococcoides mccartyi BAV1 5132310 YP_001214201.1 CDS DehaBAV1_0739 NC_009455.1 727678 728385 R hypothetical protein complement(727678..728385) Dehalococcoides mccartyi BAV1 5131416 YP_001214202.1 CDS DehaBAV1_0740 NC_009455.1 728394 728984 R hypothetical protein complement(728394..728984) Dehalococcoides mccartyi BAV1 5131308 YP_001214203.1 CDS DehaBAV1_0741 NC_009455.1 729087 729503 D PFAM: protein of unknown function DUF101; hypothetical protein 729087..729503 Dehalococcoides mccartyi BAV1 5132287 YP_001214204.1 CDS DehaBAV1_0742 NC_009455.1 729513 730973 D PFAM: protein of unknown function UPF0027; hypothetical protein 729513..730973 Dehalococcoides mccartyi BAV1 5132004 YP_001214205.1 CDS DehaBAV1_0743 NC_009455.1 731019 731588 D PFAM: nitroreductase; nitroreductase 731019..731588 Dehalococcoides mccartyi BAV1 5131702 YP_001214206.1 CDS DehaBAV1_0744 NC_009455.1 731593 733194 R TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; putative alpha-isopropylmalate/homocitrate synthase family transferase complement(731593..733194) Dehalococcoides mccartyi BAV1 5131701 YP_001214207.1 CDS DehaBAV1_0745 NC_009455.1 733201 734298 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(733201..734298) Dehalococcoides mccartyi BAV1 5131712 YP_001214208.1 CDS leuD NC_009455.1 734299 734799 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit complement(734299..734799) Dehalococcoides mccartyi BAV1 5131640 YP_001214209.1 CDS DehaBAV1_0747 NC_009455.1 734871 736121 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit complement(734871..736121) Dehalococcoides mccartyi BAV1 5132027 YP_001214210.1 CDS DehaBAV1_0748 NC_009455.1 736142 736543 R PFAM: MgtC/SapB transporter; MgtC/SapB transporter complement(736142..736543) Dehalococcoides mccartyi BAV1 5131325 YP_001214211.1 CDS DehaBAV1_0749 NC_009455.1 736559 738076 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(736559..738076) Dehalococcoides mccartyi BAV1 5131358 YP_001214212.1 CDS DehaBAV1_0750 NC_009455.1 738252 739250 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(738252..739250) Dehalococcoides mccartyi BAV1 5131947 YP_001214213.1 CDS ilvH NC_009455.1 739269 739805 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(739269..739805) Dehalococcoides mccartyi BAV1 5131806 YP_001214214.1 CDS DehaBAV1_0752 NC_009455.1 739781 741490 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; acetolactate synthase, large subunit complement(739781..741490) Dehalococcoides mccartyi BAV1 5131277 YP_001214215.1 CDS DehaBAV1_0753 NC_009455.1 741512 743179 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(741512..743179) Dehalococcoides mccartyi BAV1 5131426 YP_001214216.1 CDS DehaBAV1_0754 NC_009455.1 743280 743921 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; translation factor SUA5 complement(743280..743921) Dehalococcoides mccartyi BAV1 5131319 YP_001214217.1 CDS guaA NC_009455.1 744072 745754 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 744072..745754 Dehalococcoides mccartyi BAV1 5132065 YP_001214218.1 CDS DehaBAV1_0756 NC_009455.1 745761 746072 D hypothetical protein 745761..746072 Dehalococcoides mccartyi BAV1 5131881 YP_001214219.1 CDS DehaBAV1_0758 NC_009455.1 747360 747824 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 747360..747824 Dehalococcoides mccartyi BAV1 5132317 YP_001214220.1 CDS DehaBAV1_0759 NC_009455.1 747821 749176 D TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; adenylosuccinate lyase 747821..749176 Dehalococcoides mccartyi BAV1 5131878 YP_001214221.1 CDS DehaBAV1_0760 NC_009455.1 749177 750091 D TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 749177..750091 Dehalococcoides mccartyi BAV1 5131836 YP_001214222.1 CDS hisB NC_009455.1 750166 750756 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(750166..750756) Dehalococcoides mccartyi BAV1 5131512 YP_001214223.1 CDS DehaBAV1_0762 NC_009455.1 750758 751834 R TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class V; aminotransferase, class I and II; Allinase-like; aminotransferase complement(750758..751834) Dehalococcoides mccartyi BAV1 5131986 YP_001214224.1 CDS hisD NC_009455.1 751847 753157 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(751847..753157) Dehalococcoides mccartyi BAV1 5131536 YP_001214225.1 CDS DehaBAV1_0764 NC_009455.1 753164 754570 R PFAM: ATP phosphoribosyltransferase, catalytic region; ATP phosphoribosyltransferase, catalytic region complement(753164..754570) Dehalococcoides mccartyi BAV1 5131946 YP_001214226.1 CDS DehaBAV1_0765 NC_009455.1 754563 755801 R PFAM: tRNA synthetase, class II (G, H, P and S); histidine--tRNA ligase complement(754563..755801) Dehalococcoides mccartyi BAV1 5131954 YP_001214227.1 CDS DehaBAV1_0766 NC_009455.1 755942 756232 D membrane-bound serine protease (ClpP class)-like protein 755942..756232 Dehalococcoides mccartyi BAV1 5132077 YP_001214228.1 CDS DehaBAV1_0767 NC_009455.1 756233 757036 D PFAM: band 7 protein; hypothetical protein 756233..757036 Dehalococcoides mccartyi BAV1 5132062 YP_001214229.1 CDS DehaBAV1_0768 NC_009455.1 757106 757894 R TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; biotin--acetyl-CoA-carboxylase ligase complement(757106..757894) Dehalococcoides mccartyi BAV1 5131944 YP_001214230.1 CDS DehaBAV1_0769 NC_009455.1 757985 758539 D hypothetical protein 757985..758539 Dehalococcoides mccartyi BAV1 5131937 YP_001214231.1 CDS DehaBAV1_0770 NC_009455.1 758578 759474 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 758578..759474 Dehalococcoides mccartyi BAV1 5131976 YP_001214232.1 CDS DehaBAV1_0771 NC_009455.1 759467 760684 D ABC-type Na+ efflux pump permease component-like protein 759467..760684 Dehalococcoides mccartyi BAV1 5132372 YP_001214233.1 CDS DehaBAV1_0772 NC_009455.1 760930 761145 D hypothetical protein 760930..761145 Dehalococcoides mccartyi BAV1 5132294 YP_001214234.1 CDS DehaBAV1_0773 NC_009455.1 761192 761407 D hypothetical protein 761192..761407 Dehalococcoides mccartyi BAV1 5131920 YP_001214235.1 CDS DehaBAV1_0774 NC_009455.1 761724 762947 D PFAM: protein of unknown function DUF214; hypothetical protein 761724..762947 Dehalococcoides mccartyi BAV1 5131912 YP_001214236.1 CDS DehaBAV1_0775 NC_009455.1 762949 763659 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 762949..763659 Dehalococcoides mccartyi BAV1 5131360 YP_001214237.1 CDS DehaBAV1_0776 NC_009455.1 763672 764808 D TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase 763672..764808 Dehalococcoides mccartyi BAV1 5131283 YP_001214238.1 CDS DehaBAV1_0777 NC_009455.1 764872 766689 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 764872..766689 Dehalococcoides mccartyi BAV1 5131244 YP_001214239.1 CDS DehaBAV1_0778 NC_009455.1 766830 768776 D PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); ech hydrogenase subunit A 766830..768776 Dehalococcoides mccartyi BAV1 5131025 YP_001214240.1 CDS DehaBAV1_0779 NC_009455.1 768773 769621 D PFAM: respiratory-chain NADH dehydrogenase, subunit 1; ech hydrogenase subunit B 768773..769621 Dehalococcoides mccartyi BAV1 5131751 YP_001214241.1 CDS DehaBAV1_0780 NC_009455.1 769622 770089 D PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; ech hydrogenase subunit C 769622..770089 Dehalococcoides mccartyi BAV1 5132417 YP_001214242.1 CDS DehaBAV1_0781 NC_009455.1 770082 770567 D PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit 770082..770567 Dehalococcoides mccartyi BAV1 5131407 YP_001214243.1 CDS DehaBAV1_0782 NC_009455.1 770581 772503 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) 770581..772503 Dehalococcoides mccartyi BAV1 5131637 YP_001214244.1 CDS DehaBAV1_0783 NC_009455.1 772503 773096 D PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin 772503..773096 Dehalococcoides mccartyi BAV1 5131628 YP_001214245.1 CDS DehaBAV1_0784 NC_009455.1 773099 774484 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 773099..774484 Dehalococcoides mccartyi BAV1 5131625 YP_001214246.1 CDS DehaBAV1_0785 NC_009455.1 774485 775564 D PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; ech hydrogenase subunit E 774485..775564 Dehalococcoides mccartyi BAV1 5131608 YP_001214247.1 CDS DehaBAV1_0786 NC_009455.1 775574 775918 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ech hydrogenase subunit F 775574..775918 Dehalococcoides mccartyi BAV1 5132319 YP_001214248.1 CDS DehaBAV1_0787 NC_009455.1 776000 776929 R PFAM: tRNA synthetase, class II (G, H, P and S); tRNA synthetase, class II (D, K and N); tRNA synthetase complement(776000..776929) Dehalococcoides mccartyi BAV1 5131600 YP_001214249.1 CDS DehaBAV1_0788 NC_009455.1 776935 777501 R TIGRFAM: translation elongation factor P; PFAM: Elongation factor P/YeiP protein; Elongation factor, KOW domain protein; translation elongation factor P (EF-P) complement(776935..777501) Dehalococcoides mccartyi BAV1 5131597 YP_001214250.1 CDS DehaBAV1_0789 NC_009455.1 777691 778176 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 777691..778176 Dehalococcoides mccartyi BAV1 5132264 YP_001214251.1 CDS DehaBAV1_0790 NC_009455.1 778181 781105 D PFAM: MMPL domain protein; MMPL domain-containing protein 778181..781105 Dehalococcoides mccartyi BAV1 5132342 YP_001214252.1 CDS DehaBAV1_0791 NC_009455.1 781151 781795 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(781151..781795) Dehalococcoides mccartyi BAV1 5131590 YP_001214253.1 CDS DehaBAV1_0792 NC_009455.1 782301 782636 R PFAM: transcriptional regulator TrmB; Helix-turn-helix, type 11 domain protein; transcriptional regulator TrmB complement(782301..782636) Dehalococcoides mccartyi BAV1 5132214 YP_001214254.1 CDS DehaBAV1_0793 NC_009455.1 783000 784274 D PFAM: Arsenical pump membrane protein; Citrate transporter; arsenical pump membrane protein 783000..784274 Dehalococcoides mccartyi BAV1 5132219 YP_001214255.1 CDS DehaBAV1_0794 NC_009455.1 784276 785661 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 784276..785661 Dehalococcoides mccartyi BAV1 5132199 YP_001214256.1 CDS DehaBAV1_0795 NC_009455.1 785751 786920 D PFAM: peptidase M29, aminopeptidase II; peptidase M29, aminopeptidase II 785751..786920 Dehalococcoides mccartyi BAV1 5132180 YP_001214257.1 CDS DehaBAV1_0796 NC_009455.1 786957 787628 D PFAM: phosphoribosyltransferase; phosphoribosyltransferase 786957..787628 Dehalococcoides mccartyi BAV1 5132386 YP_001214258.1 CDS DehaBAV1_0797 NC_009455.1 787770 788291 D PFAM: Rubrerythrin; rubrerythrin 787770..788291 Dehalococcoides mccartyi BAV1 5131403 YP_001214259.1 CDS DehaBAV1_0798 NC_009455.1 788353 789048 D hypothetical protein 788353..789048 Dehalococcoides mccartyi BAV1 5131398 YP_001214260.1 CDS DehaBAV1_0799 NC_009455.1 789067 789873 R hypothetical protein complement(789067..789873) Dehalococcoides mccartyi BAV1 5131351 YP_001214261.1 CDS DehaBAV1_0800 NC_009455.1 789857 790765 R PFAM: protein of unknown function DUF75; hypothetical protein complement(789857..790765) Dehalococcoides mccartyi BAV1 5131350 YP_001214262.1 CDS DehaBAV1_0801 NC_009455.1 790976 791176 R hypothetical protein complement(790976..791176) Dehalococcoides mccartyi BAV1 5131323 YP_001214263.1 CDS DehaBAV1_0802 NC_009455.1 791203 791457 R hypothetical protein complement(791203..791457) Dehalococcoides mccartyi BAV1 5131349 YP_001214264.1 CDS DehaBAV1_0803 NC_009455.1 791615 792367 R PFAM: protein of unknown function DUF375; hypothetical protein complement(791615..792367) Dehalococcoides mccartyi BAV1 5131362 YP_001214265.1 CDS DehaBAV1_0804 NC_009455.1 792377 792787 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(792377..792787) Dehalococcoides mccartyi BAV1 5131311 YP_001214266.1 CDS DehaBAV1_0805 NC_009455.1 792796 794022 R PFAM: protein of unknown function DUF39; hypothetical protein complement(792796..794022) Dehalococcoides mccartyi BAV1 5131334 YP_001214267.1 CDS DehaBAV1_0806 NC_009455.1 794243 795325 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 794243..795325 Dehalococcoides mccartyi BAV1 5132155 YP_001214268.1 CDS DehaBAV1_0807 NC_009455.1 795608 795979 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 795608..795979 Dehalococcoides mccartyi BAV1 5132392 YP_001214269.1 CDS DehaBAV1_0808 NC_009455.1 795970 796572 D TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH-quinone oxidoreductase subunit B 795970..796572 Dehalococcoides mccartyi BAV1 5131412 YP_001214270.1 CDS DehaBAV1_0809 NC_009455.1 796577 797026 D PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH dehydrogenase (ubiquinone), 30 kDa subunit 796577..797026 Dehalococcoides mccartyi BAV1 5132086 YP_001214271.1 CDS DehaBAV1_0810 NC_009455.1 797016 798119 D TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase I subunit D 797016..798119 Dehalococcoides mccartyi BAV1 5132061 YP_001214272.1 CDS DehaBAV1_0811 NC_009455.1 798119 799180 D PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 798119..799180 Dehalococcoides mccartyi BAV1 5132093 YP_001214273.1 CDS DehaBAV1_0812 NC_009455.1 799164 799715 D TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH-quinone oxidoreductase subunit I 799164..799715 Dehalococcoides mccartyi BAV1 5131356 YP_001214274.1 CDS DehaBAV1_0813 NC_009455.1 799722 800204 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 799722..800204 Dehalococcoides mccartyi BAV1 5131285 YP_001214275.1 CDS DehaBAV1_0814 NC_009455.1 800206 800511 D PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L 800206..800511 Dehalococcoides mccartyi BAV1 5131340 YP_001214276.1 CDS DehaBAV1_0815 NC_009455.1 800528 802492 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain L 800528..802492 Dehalococcoides mccartyi BAV1 5132441 YP_001214277.1 CDS DehaBAV1_0816 NC_009455.1 802502 803995 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain M 802502..803995 Dehalococcoides mccartyi BAV1 5131333 YP_001214278.1 CDS DehaBAV1_0817 NC_009455.1 804002 805459 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain N 804002..805459 Dehalococcoides mccartyi BAV1 5131321 YP_001214279.1 CDS DehaBAV1_0818 NC_009455.1 805470 806264 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 805470..806264 Dehalococcoides mccartyi BAV1 5131300 YP_001214280.1 CDS DehaBAV1_0819 NC_009455.1 806244 806900 R TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III complement(806244..806900) Dehalococcoides mccartyi BAV1 5131331 YP_001214281.1 CDS DehaBAV1_0820 NC_009455.1 807025 808536 D TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; adenosylcobyric acid synthase 807025..808536 Dehalococcoides mccartyi BAV1 5131326 YP_001214282.1 CDS DehaBAV1_0821 NC_009455.1 808533 808943 D PFAM: thioesterase superfamily protein; thioesterase superfamily protein 808533..808943 Dehalococcoides mccartyi BAV1 5131306 YP_001214283.1 CDS DehaBAV1_0822 NC_009455.1 808951 809781 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(808951..809781) Dehalococcoides mccartyi BAV1 5131364 YP_001214284.1 CDS DehaBAV1_0823 NC_009455.1 809768 810034 R hypothetical protein complement(809768..810034) Dehalococcoides mccartyi BAV1 5132051 YP_001214285.1 CDS DehaBAV1_0824 NC_009455.1 810044 811333 R phenylacetate--CoA ligase complement(810044..811333) Dehalococcoides mccartyi BAV1 5131328 YP_001214286.1 CDS DehaBAV1_0825 NC_009455.1 811324 812115 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(811324..812115) Dehalococcoides mccartyi BAV1 5132080 YP_001214287.1 CDS DehaBAV1_0826 NC_009455.1 812136 813422 R branched-chain amino acid ABC transporter periplasmic component-like protein complement(812136..813422) Dehalococcoides mccartyi BAV1 5132102 YP_001214288.1 CDS DehaBAV1_0827 NC_009455.1 813511 814803 R ABC-type branched-chain amino acid transport systems periplasmic component-like protein complement(813511..814803) Dehalococcoides mccartyi BAV1 5132031 YP_001214289.1 CDS DehaBAV1_0828 NC_009455.1 814846 815898 R PFAM: inner-membrane translocator; inner-membrane translocator complement(814846..815898) Dehalococcoides mccartyi BAV1 5132083 YP_001214290.1 CDS DehaBAV1_0829 NC_009455.1 815901 816785 R PFAM: inner-membrane translocator; inner-membrane translocator complement(815901..816785) Dehalococcoides mccartyi BAV1 5131310 YP_001214291.1 CDS DehaBAV1_0830 NC_009455.1 816795 818687 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(816795..818687) Dehalococcoides mccartyi BAV1 5131352 YP_001214292.1 CDS DehaBAV1_0831 NC_009455.1 818933 820816 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein 818933..820816 Dehalococcoides mccartyi BAV1 5131318 YP_001214293.1 CDS DehaBAV1_0832 NC_009455.1 820821 821414 D Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.; indolepyruvate oxidoreductase subunit beta 820821..821414 Dehalococcoides mccartyi BAV1 5131303 YP_001214294.1 CDS DehaBAV1_0833 NC_009455.1 821411 821899 R PFAM: CBS domain containing protein; hypothetical protein complement(821411..821899) Dehalococcoides mccartyi BAV1 5131264 YP_001214295.1 CDS DehaBAV1_0834 NC_009455.1 821914 822114 R hypothetical protein complement(821914..822114) Dehalococcoides mccartyi BAV1 5131317 YP_001214296.1 CDS DehaBAV1_0835 NC_009455.1 822116 822499 R PFAM: nitrogen-fixing NifU domain protein; NifU domain-containing protein complement(822116..822499) Dehalococcoides mccartyi BAV1 5131370 YP_001214297.1 CDS DehaBAV1_0836 NC_009455.1 822668 822922 D hypothetical protein 822668..822922 Dehalococcoides mccartyi BAV1 5131292 YP_001214298.1 CDS DehaBAV1_0837 NC_009455.1 822932 825418 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase 822932..825418 Dehalococcoides mccartyi BAV1 5131302 YP_001214299.1 CDS DehaBAV1_0838 NC_009455.1 825516 826004 D PFAM: heat shock protein Hsp20; heat shock protein Hsp20 825516..826004 Dehalococcoides mccartyi BAV1 5131341 YP_001214300.1 CDS DehaBAV1_0839 NC_009455.1 826057 826884 D PFAM: Rubrerythrin; Ferritin, Dps family protein; rubrerythrin 826057..826884 Dehalococcoides mccartyi BAV1 5131363 YP_001214301.1 CDS DehaBAV1_0840 NC_009455.1 826914 827492 D PFAM: manganese and iron superoxide dismutase; manganese and iron superoxide dismutase 826914..827492 Dehalococcoides mccartyi BAV1 5132336 YP_001214302.1 CDS DehaBAV1_0841 NC_009455.1 827590 828360 R hypothetical protein complement(827590..828360) Dehalococcoides mccartyi BAV1 5132424 YP_001214303.1 CDS DehaBAV1_0842 NC_009455.1 828813 830987 D hypothetical protein 828813..830987 Dehalococcoides mccartyi BAV1 5132402 YP_001214304.1 CDS DehaBAV1_0843 NC_009455.1 831000 831857 R hypothetical protein complement(831000..831857) Dehalococcoides mccartyi BAV1 5131343 YP_001214305.1 CDS DehaBAV1_0845 NC_009455.1 832264 833280 D hypothetical protein 832264..833280 Dehalococcoides mccartyi BAV1 5132323 YP_001214306.1 CDS DehaBAV1_0846 NC_009455.1 833277 834383 D PFAM: phage integrase family protein; phage integrase family protein 833277..834383 Dehalococcoides mccartyi BAV1 5131374 YP_001214307.1 CDS DehaBAV1_0847 NC_009455.1 834960 836510 R TIGRFAM: reductive dehalogenase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; reductive dehalogenase complement(834960..836510) Dehalococcoides mccartyi BAV1 5131305 YP_001214308.1 CDS DehaBAV1_0848 NC_009455.1 837148 838239 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS/PAC sensor signal transduction histidine kinase 837148..838239 Dehalococcoides mccartyi BAV1 5131359 YP_001214309.1 CDS DehaBAV1_0849 NC_009455.1 838232 838861 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 838232..838861 Dehalococcoides mccartyi BAV1 5131346 YP_001214310.1 CDS DehaBAV1_0850 NC_009455.1 839311 839619 R PFAM: Smr protein/MutS2; Smr protein/MutS2 complement(839311..839619) Dehalococcoides mccartyi BAV1 5132259 YP_001214311.1 CDS DehaBAV1_0851 NC_009455.1 839769 840575 D PFAM: histidine biosynthesis protein; histidine biosynthesis protein 839769..840575 Dehalococcoides mccartyi BAV1 5131365 YP_001214312.1 CDS DehaBAV1_0852 NC_009455.1 840634 841686 D PFAM: Protein of unknown function DUF128; Ribonuclease R winged-helix domain protein; hypothetical protein 840634..841686 Dehalococcoides mccartyi BAV1 5131355 YP_001214313.1 CDS DehaBAV1_0853 NC_009455.1 841740 842990 R TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme complement(841740..842990) Dehalococcoides mccartyi BAV1 5131454 YP_001214314.1 CDS DehaBAV1_0854 NC_009455.1 843079 844347 D PFAM: beta-ketoacyl synthase; 3-oxoacyl-ACP synthase 843079..844347 Dehalococcoides mccartyi BAV1 5132189 YP_001214315.1 CDS DehaBAV1_0855 NC_009455.1 844331 846031 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ 844331..846031 Dehalococcoides mccartyi BAV1 5131447 YP_001214316.1 CDS DehaBAV1_0856 NC_009455.1 846047 846679 D PFAM: protein of unknown function DUF205; membrane protein 846047..846679 Dehalococcoides mccartyi BAV1 5132165 YP_001214317.1 CDS DehaBAV1_0857 NC_009455.1 846859 847641 R PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(846859..847641) Dehalococcoides mccartyi BAV1 5132333 YP_001214318.1 CDS DehaBAV1_0858 NC_009455.1 847712 850006 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase complement(847712..850006) Dehalococcoides mccartyi BAV1 5132175 YP_001214319.1 CDS DehaBAV1_0859 NC_009455.1 850018 850308 R PFAM: protein of unknown function DUF503; hypothetical protein complement(850018..850308) Dehalococcoides mccartyi BAV1 5132212 YP_001214320.1 CDS rpsO NC_009455.1 850493 850756 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 850493..850756 Dehalococcoides mccartyi BAV1 5132203 YP_001214321.1 CDS DehaBAV1_0861 NC_009455.1 850798 852960 D PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 850798..852960 Dehalococcoides mccartyi BAV1 5132168 YP_001214322.1 CDS DehaBAV1_0862 NC_009455.1 852977 853768 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 852977..853768 Dehalococcoides mccartyi BAV1 5131683 YP_001214323.1 CDS DehaBAV1_0863 NC_009455.1 853779 854795 D TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate semialdehyde dehydrogenase 853779..854795 Dehalococcoides mccartyi BAV1 5131671 YP_001214324.1 CDS DehaBAV1_0864 NC_009455.1 854798 855691 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 854798..855691 Dehalococcoides mccartyi BAV1 5131670 YP_001214325.1 CDS DehaBAV1_0865 NC_009455.1 855693 856358 D hypothetical protein 855693..856358 Dehalococcoides mccartyi BAV1 5131666 YP_001214326.1 CDS DehaBAV1_0866 NC_009455.1 856318 856947 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 856318..856947 Dehalococcoides mccartyi BAV1 5131657 YP_001214327.1 CDS DehaBAV1_0867 NC_009455.1 857067 858365 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(857067..858365) Dehalococcoides mccartyi BAV1 5131448 YP_001214328.1 CDS DehaBAV1_0868 NC_009455.1 858441 859025 R PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(858441..859025) Dehalococcoides mccartyi BAV1 5131561 YP_001214329.1 CDS DehaBAV1_0869 NC_009455.1 859070 860218 R PFAM: glycosyl transferase, group 1; phosphatidylinositol alpha-mannosyltransferase complement(859070..860218) Dehalococcoides mccartyi BAV1 5131103 YP_001214330.1 CDS DehaBAV1_0870 NC_009455.1 860263 861375 R PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; myo-inositol-1-phosphate synthase complement(860263..861375) Dehalococcoides mccartyi BAV1 5131534 YP_001214331.1 CDS DehaBAV1_0871 NC_009455.1 861519 861692 R hypothetical protein complement(861519..861692) Dehalococcoides mccartyi BAV1 5131399 YP_001214332.1 CDS truB NC_009455.1 861739 862641 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(861739..862641) Dehalococcoides mccartyi BAV1 5131770 YP_001214333.1 CDS DehaBAV1_0873 NC_009455.1 862644 863000 R PFAM: ribosome-binding factor A; ribosome-binding factor A complement(862644..863000) Dehalococcoides mccartyi BAV1 5131761 YP_001214334.1 CDS infB NC_009455.1 863000 864781 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(863000..864781) Dehalococcoides mccartyi BAV1 5131744 YP_001214335.1 CDS DehaBAV1_0875 NC_009455.1 864762 865076 R PFAM: protein of unknown function DUF448; hypothetical protein complement(864762..865076) Dehalococcoides mccartyi BAV1 5131979 YP_001214336.1 CDS nusA NC_009455.1 865051 866526 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(865051..866526) Dehalococcoides mccartyi BAV1 5131237 YP_001214337.1 CDS DehaBAV1_0877 NC_009455.1 866716 868236 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; SMART: AAA ATPase; Mg chelatase subunit ChlI 866716..868236 Dehalococcoides mccartyi BAV1 5131923 YP_001214338.1 CDS DehaBAV1_0878 NC_009455.1 868238 869113 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 868238..869113 Dehalococcoides mccartyi BAV1 5132181 YP_001214339.1 CDS DehaBAV1_0879 NC_009455.1 869158 869475 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(869158..869475) Dehalococcoides mccartyi BAV1 5131391 YP_001214340.1 CDS DehaBAV1_0880 NC_009455.1 869694 870338 D PFAM: protein of unknown function DUF502; hypothetical protein 869694..870338 Dehalococcoides mccartyi BAV1 5132420 YP_001214341.1 CDS rplL NC_009455.1 870419 870790 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(870419..870790) Dehalococcoides mccartyi BAV1 5132394 YP_001214342.1 CDS rplJ NC_009455.1 870824 871354 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(870824..871354) Dehalococcoides mccartyi BAV1 5131387 YP_001214343.1 CDS rplA NC_009455.1 871506 872219 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(871506..872219) Dehalococcoides mccartyi BAV1 5131377 YP_001214344.1 CDS rplK NC_009455.1 872223 872645 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(872223..872645) Dehalococcoides mccartyi BAV1 5131392 YP_001214345.1 CDS DehaBAV1_0885 NC_009455.1 872664 873197 R TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; transcription antitermination protein nusG complement(872664..873197) Dehalococcoides mccartyi BAV1 5131767 YP_001214346.1 CDS secE NC_009455.1 873244 873462 R forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(873244..873462) Dehalococcoides mccartyi BAV1 5131386 YP_001214347.1 CDS rpmG NC_009455.1 873486 873653 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 complement(873486..873653) Dehalococcoides mccartyi BAV1 5131753 YP_001214348.1 CDS DehaBAV1_0888 NC_009455.1 873655 874857 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(873655..874857) Dehalococcoides mccartyi BAV1 5131752 YP_001214349.1 CDS DehaBAV1_0889 NC_009455.1 875382 876095 R PFAM: LmbE family protein; LmbE family protein complement(875382..876095) Dehalococcoides mccartyi BAV1 5132254 YP_001214350.1 CDS DehaBAV1_0890 NC_009455.1 876108 877325 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(876108..877325) Dehalococcoides mccartyi BAV1 5131058 YP_001214351.1 CDS DehaBAV1_0891 NC_009455.1 877318 878307 R hypothetical protein complement(877318..878307) Dehalococcoides mccartyi BAV1 5131034 YP_001214352.1 CDS DehaBAV1_0892 NC_009455.1 878437 878775 D PFAM: regulatory protein, ArsR; ArsR family transcriptional regulator 878437..878775 Dehalococcoides mccartyi BAV1 5132255 YP_001214353.1 CDS DehaBAV1_0893 NC_009455.1 878775 879806 D PFAM: permease; permease 878775..879806 Dehalococcoides mccartyi BAV1 5132285 YP_001214354.1 CDS DehaBAV1_0894 NC_009455.1 879824 880066 D TIGRFAM: redox-active disulfide protein 2; redox-active disulfide protein 2 879824..880066 Dehalococcoides mccartyi BAV1 5132408 YP_001214355.1 CDS DehaBAV1_0895 NC_009455.1 880140 880952 R hypothetical protein complement(880140..880952) Dehalococcoides mccartyi BAV1 5131964 YP_001214356.1 CDS DehaBAV1_0896 NC_009455.1 881276 882463 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(881276..882463) Dehalococcoides mccartyi BAV1 5131799 YP_001214357.1 CDS DehaBAV1_0897 NC_009455.1 882952 883119 D hypothetical protein 882952..883119 Dehalococcoides mccartyi BAV1 5132044 YP_001214358.1 CDS DehaBAV1_0898 NC_009455.1 883376 883885 R hypothetical protein complement(883376..883885) Dehalococcoides mccartyi BAV1 5131807 YP_001214359.1 CDS DehaBAV1_0899 NC_009455.1 883925 884161 R hypothetical protein complement(883925..884161) Dehalococcoides mccartyi BAV1 5131418 YP_001214360.1 CDS DehaBAV1_0900 NC_009455.1 884411 884662 R hypothetical protein complement(884411..884662) Dehalococcoides mccartyi BAV1 5131299 YP_001214361.1 CDS DehaBAV1_0901 NC_009455.1 884864 885253 R ACT domain-containing protein complement(884864..885253) Dehalococcoides mccartyi BAV1 5131251 YP_001214362.1 CDS DehaBAV1_0902 NC_009455.1 885274 886593 R phenylacetate-CoA ligase complement(885274..886593) Dehalococcoides mccartyi BAV1 5131397 YP_001214363.1 CDS DehaBAV1_0903 NC_009455.1 886821 890609 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(886821..890609) Dehalococcoides mccartyi BAV1 5132329 YP_001214364.1 CDS DehaBAV1_0904 NC_009455.1 890880 891449 R hypothetical protein complement(890880..891449) Dehalococcoides mccartyi BAV1 5131394 YP_001214365.1 CDS DehaBAV1_0905 NC_009455.1 893905 894066 R hypothetical protein complement(893905..894066) Dehalococcoides mccartyi BAV1 5132258 YP_001214366.1 CDS DehaBAV1_0906 NC_009455.1 894253 894420 R hypothetical protein complement(894253..894420) Dehalococcoides mccartyi BAV1 5131380 YP_001214367.1 CDS DehaBAV1_0907 NC_009455.1 894502 895101 D hypothetical protein 894502..895101 Dehalococcoides mccartyi BAV1 5132371 YP_001214368.1 CDS DehaBAV1_0908 NC_009455.1 895614 896360 D PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 895614..896360 Dehalococcoides mccartyi BAV1 5132251 YP_001214369.1 CDS DehaBAV1_0909 NC_009455.1 896390 896530 D hypothetical protein 896390..896530 Dehalococcoides mccartyi BAV1 5131390 YP_001214370.1 CDS DehaBAV1_0910 NC_009455.1 896552 896827 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 896552..896827 Dehalococcoides mccartyi BAV1 5131401 YP_001214371.1 CDS DehaBAV1_0911 NC_009455.1 896854 897588 R hypothetical protein complement(896854..897588) Dehalococcoides mccartyi BAV1 5132312 YP_001214372.1 CDS DehaBAV1_0912 NC_009455.1 897585 897908 R hypothetical protein complement(897585..897908) Dehalococcoides mccartyi BAV1 5131437 YP_001214373.1 CDS DehaBAV1_0913 NC_009455.1 898119 899612 R PFAM: peptidase M17, leucyl aminopeptidase domain protein; leucyl aminopeptidase complement(898119..899612) Dehalococcoides mccartyi BAV1 5131059 YP_001214374.1 CDS DehaBAV1_0914 NC_009455.1 899612 900214 R kinase-like protein complement(899612..900214) Dehalococcoides mccartyi BAV1 5131011 YP_001214375.1 CDS DehaBAV1_0915 NC_009455.1 900263 901120 R TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein complement(900263..901120) Dehalococcoides mccartyi BAV1 5131132 YP_001214376.1 CDS DehaBAV1_0916 NC_009455.1 901203 902720 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(901203..902720) Dehalococcoides mccartyi BAV1 5131125 YP_001214377.1 CDS DehaBAV1_0917 NC_009455.1 903290 904654 D catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 903290..904654 Dehalococcoides mccartyi BAV1 5131571 YP_001214378.1 CDS DehaBAV1_0918 NC_009455.1 904778 905593 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap 904778..905593 Dehalococcoides mccartyi BAV1 5131890 YP_001214379.1 CDS DehaBAV1_0919 NC_009455.1 905602 906735 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; 2-alkenal reductase 905602..906735 Dehalococcoides mccartyi BAV1 5131627 YP_001214380.1 CDS ileS NC_009455.1 906748 909792 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase complement(906748..909792) Dehalococcoides mccartyi BAV1 5131624 YP_001214381.1 CDS DehaBAV1_0921 NC_009455.1 910095 910775 R PFAM: single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein complement(910095..910775) Dehalococcoides mccartyi BAV1 5131620 YP_001214382.1 CDS DehaBAV1_0923 NC_009455.1 911646 912761 R PFAM: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone complement(911646..912761) Dehalococcoides mccartyi BAV1 5132400 YP_001214383.1 CDS DehaBAV1_0925 NC_009455.1 912955 913335 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P protein component complement(912955..913335) Dehalococcoides mccartyi BAV1 5132270 YP_001214384.1 CDS rpmH NC_009455.1 913376 913516 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(913376..913516) Dehalococcoides mccartyi BAV1 5131646 YP_001214385.1 CDS DehaBAV1_0927 NC_009455.1 913552 913995 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(913552..913995) Dehalococcoides mccartyi BAV1 5131645 YP_001214386.1 CDS DehaBAV1_0928 NC_009455.1 914030 914437 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(914030..914437) Dehalococcoides mccartyi BAV1 5131648 YP_001214387.1 CDS rpsF NC_009455.1 914488 914817 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(914488..914817) Dehalococcoides mccartyi BAV1 5131649 YP_001214388.1 CDS DehaBAV1_0930 NC_009455.1 915341 915583 D hypothetical protein 915341..915583 Dehalococcoides mccartyi BAV1 5131967 YP_001214389.1 CDS DehaBAV1_0931 NC_009455.1 915656 916033 R PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(915656..916033) Dehalococcoides mccartyi BAV1 5131653 YP_001214390.1 CDS DehaBAV1_0932 NC_009455.1 916164 917489 D hypothetical protein 916164..917489 Dehalococcoides mccartyi BAV1 5131654 YP_001214391.1 CDS DehaBAV1_0933 NC_009455.1 917578 918717 R PFAM: Tubulin/FtsZ, GTPase; twin-arginine translocating C- subunit complement(917578..918717) Dehalococcoides mccartyi BAV1 5131655 YP_001214392.1 CDS DehaBAV1_0934 NC_009455.1 918901 920667 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 918901..920667 Dehalococcoides mccartyi BAV1 5131656 YP_001214393.1 CDS DehaBAV1_0935 NC_009455.1 920670 921533 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 920670..921533 Dehalococcoides mccartyi BAV1 5131659 YP_001214394.1 CDS DehaBAV1_0936 NC_009455.1 921640 922212 D hypothetical protein 921640..922212 Dehalococcoides mccartyi BAV1 5131658 YP_001214395.1 CDS DehaBAV1_0937 NC_009455.1 922326 923009 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 922326..923009 Dehalococcoides mccartyi BAV1 5131660 YP_001214396.1 CDS DehaBAV1_0938 NC_009455.1 923017 924438 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 923017..924438 Dehalococcoides mccartyi BAV1 5131661 YP_001214397.1 CDS DehaBAV1_0939 NC_009455.1 924463 925452 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(924463..925452) Dehalococcoides mccartyi BAV1 5131662 YP_001214398.1 CDS DehaBAV1_0940 NC_009455.1 925425 926432 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(925425..926432) Dehalococcoides mccartyi BAV1 5131663 YP_001214399.1 CDS DehaBAV1_0941 NC_009455.1 926434 927339 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(926434..927339) Dehalococcoides mccartyi BAV1 5131667 YP_001214400.1 CDS DehaBAV1_0942 NC_009455.1 927347 928264 R PFAM: binding-protein-dependent transport systems inner membrane component; nickel-transporting ATPase complement(927347..928264) Dehalococcoides mccartyi BAV1 5131665 YP_001214401.1 CDS DehaBAV1_0943 NC_009455.1 928341 930017 R PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(928341..930017) Dehalococcoides mccartyi BAV1 5131672 YP_001214402.1 CDS DehaBAV1_0944 NC_009455.1 930263 931669 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 930263..931669 Dehalococcoides mccartyi BAV1 5131669 YP_001214403.1 CDS DehaBAV1_0945 NC_009455.1 932038 932736 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(932038..932736) Dehalococcoides mccartyi BAV1 5131679 YP_001214404.1 CDS DehaBAV1_0946 NC_009455.1 932733 936422 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(932733..936422) Dehalococcoides mccartyi BAV1 5131674 YP_001214405.1 CDS DehaBAV1_0947 NC_009455.1 936556 937737 D PFAM: (Uracil-5)-methyltransferase; (uracil-5)-methyltransferase 936556..937737 Dehalococcoides mccartyi BAV1 5131676 YP_001214406.1 CDS DehaBAV1_0948 NC_009455.1 937773 938309 D hypothetical protein 937773..938309 Dehalococcoides mccartyi BAV1 5131677 YP_001214407.1 CDS DehaBAV1_0949 NC_009455.1 938336 939010 D TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 938336..939010 Dehalococcoides mccartyi BAV1 5131681 YP_001214408.1 CDS DehaBAV1_0950 NC_009455.1 939055 939480 R hypothetical protein complement(939055..939480) Dehalococcoides mccartyi BAV1 5131682 YP_001214409.1 CDS DehaBAV1_0951 NC_009455.1 939508 941208 R TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthase; NH(3)-dependent NAD(+) synthetase complement(939508..941208) Dehalococcoides mccartyi BAV1 5131686 YP_001214410.1 CDS DehaBAV1_0952 NC_009455.1 941293 942624 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; L-glutamine synthetase complement(941293..942624) Dehalococcoides mccartyi BAV1 5131688 YP_001214411.1 CDS DehaBAV1_0953 NC_009455.1 942751 943089 R PFAM: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(942751..943089) Dehalococcoides mccartyi BAV1 5131636 YP_001214412.1 CDS DehaBAV1_0954 NC_009455.1 943086 944312 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter complement(943086..944312) Dehalococcoides mccartyi BAV1 5131691 YP_001214413.1 CDS DehaBAV1_0955 NC_009455.1 944451 945122 R PFAM: transcriptional regulator domain protein; two component transcriptional regulator complement(944451..945122) Dehalococcoides mccartyi BAV1 5132297 YP_001214414.1 CDS DehaBAV1_0956 NC_009455.1 945144 945914 R PFAM: glutamate synthase, alpha subunit domain protein; glutamate synthase (NADPH) GltB3 subunit complement(945144..945914) Dehalococcoides mccartyi BAV1 5131692 YP_001214415.1 CDS DehaBAV1_0957 NC_009455.1 945915 947417 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase (NADPH) GltB2 subunit complement(945915..947417) Dehalococcoides mccartyi BAV1 5131693 YP_001214416.1 CDS DehaBAV1_0958 NC_009455.1 947419 948180 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(947419..948180) Dehalococcoides mccartyi BAV1 5131689 YP_001214417.1 CDS DehaBAV1_0959 NC_009455.1 948174 949304 R PFAM: glutamine amidotransferase, class-II; glutamate synthase (NADPH) GltB1 subunit complement(948174..949304) Dehalococcoides mccartyi BAV1 5131696 YP_001214418.1 CDS DehaBAV1_0960 NC_009455.1 949317 950624 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(949317..950624) Dehalococcoides mccartyi BAV1 5131694 YP_001214419.1 CDS hisH NC_009455.1 950621 951238 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(950621..951238) Dehalococcoides mccartyi BAV1 5131690 YP_001214420.1 CDS DehaBAV1_0962 NC_009455.1 951254 951685 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(951254..951685) Dehalococcoides mccartyi BAV1 5131632 YP_001214421.1 CDS DehaBAV1_0963 NC_009455.1 951817 952398 R PFAM: protein of unknown function DUF204; hypothetical protein complement(951817..952398) Dehalococcoides mccartyi BAV1 5131635 YP_001214422.1 CDS DehaBAV1_0964 NC_009455.1 952520 953482 D TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase 952520..953482 Dehalococcoides mccartyi BAV1 5131687 YP_001214423.1 CDS DehaBAV1_0965 NC_009455.1 953582 954076 R hypothetical protein complement(953582..954076) Dehalococcoides mccartyi BAV1 5131685 YP_001214424.1 CDS DehaBAV1_0966 NC_009455.1 954256 955077 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 954256..955077 Dehalococcoides mccartyi BAV1 5132337 YP_001214425.1 CDS DehaBAV1_0967 NC_009455.1 955128 956051 D TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; adenosylcobinamide-phosphate synthase 955128..956051 Dehalococcoides mccartyi BAV1 5132365 YP_001214426.1 CDS DehaBAV1_0968 NC_009455.1 956087 956635 D PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)yrinic acid a,c-diamide adenosyltransferase 956087..956635 Dehalococcoides mccartyi BAV1 5132390 YP_001214427.1 CDS DehaBAV1_0969 NC_009455.1 956635 957417 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 956635..957417 Dehalococcoides mccartyi BAV1 5132376 YP_001214428.1 CDS DehaBAV1_0970 NC_009455.1 957451 958890 D PFAM: glycosyl transferase, family 2; polysaccharide deacetylase; polysaccharide deacetylase 957451..958890 Dehalococcoides mccartyi BAV1 5132404 YP_001214429.1 CDS DehaBAV1_0971 NC_009455.1 958900 959562 D hypothetical protein 958900..959562 Dehalococcoides mccartyi BAV1 5132393 YP_001214430.1 CDS DehaBAV1_0972 NC_009455.1 959559 960422 R hypothetical protein complement(959559..960422) Dehalococcoides mccartyi BAV1 5132313 YP_001214431.1 CDS DehaBAV1_0973 NC_009455.1 960533 961264 D hypothetical protein 960533..961264 Dehalococcoides mccartyi BAV1 5132343 YP_001214432.1 CDS DehaBAV1_0974 NC_009455.1 961357 962100 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(961357..962100) Dehalococcoides mccartyi BAV1 5132172 YP_001214433.1 CDS DehaBAV1_0975 NC_009455.1 962311 963864 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(962311..963864) Dehalococcoides mccartyi BAV1 5132113 YP_001214434.1 CDS DehaBAV1_0976 NC_009455.1 963945 964229 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 963945..964229 Dehalococcoides mccartyi BAV1 5132201 YP_001214435.1 CDS DehaBAV1_0977 NC_009455.1 964367 965155 D PFAM: Integrase, catalytic region; integrase catalytic subunit 964367..965155 Dehalococcoides mccartyi BAV1 5132379 YP_001214436.1 CDS DehaBAV1_0978 NC_009455.1 965167 966294 R PFAM: CoA-binding domain protein; CoA-binding domain-containing protein complement(965167..966294) Dehalococcoides mccartyi BAV1 5132223 YP_001214437.1 CDS DehaBAV1_0979 NC_009455.1 966773 971665 D PFAM: Ig domain protein, group 1 domain protein; Ig domain-containing protein 966773..971665 Dehalococcoides mccartyi BAV1 5132375 YP_001214438.1 CDS DehaBAV1_0980 NC_009455.1 971782 972189 R PFAM: ferric-uptake regulator; ferric uptake regulator family protein complement(971782..972189) Dehalococcoides mccartyi BAV1 5131643 YP_001214439.1 CDS DehaBAV1_0981 NC_009455.1 972332 973159 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(972332..973159) Dehalococcoides mccartyi BAV1 5131711 YP_001214440.1 CDS DehaBAV1_0982 NC_009455.1 973279 973827 D PFAM: transcriptional regulator PadR family protein; PadR family transcriptional regulator 973279..973827 Dehalococcoides mccartyi BAV1 5132378 YP_001214441.1 CDS DehaBAV1_0983 NC_009455.1 974018 974497 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 974018..974497 Dehalococcoides mccartyi BAV1 5132154 YP_001214442.1 CDS DehaBAV1_0984 NC_009455.1 974541 976766 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter related 974541..976766 Dehalococcoides mccartyi BAV1 5131898 YP_001214443.1 CDS DehaBAV1_0985 NC_009455.1 976763 978673 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter, transmembrane region 976763..978673 Dehalococcoides mccartyi BAV1 5132142 YP_001214444.1 CDS DehaBAV1_0986 NC_009455.1 978770 979078 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 978770..979078 Dehalococcoides mccartyi BAV1 5132059 YP_001214445.1 CDS DehaBAV1_0987 NC_009455.1 979602 980105 R PFAM: regulatory protein, MarR; MarR family transcriptional regulator complement(979602..980105) Dehalococcoides mccartyi BAV1 5132043 YP_001214446.1 CDS DehaBAV1_0988 NC_009455.1 980352 981950 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 980352..981950 Dehalococcoides mccartyi BAV1 5131361 YP_001214447.1 CDS DehaBAV1_0989 NC_009455.1 981952 982248 D hypothetical protein 981952..982248 Dehalococcoides mccartyi BAV1 5131354 YP_001214448.1 CDS DehaBAV1_0990 NC_009455.1 982305 982607 D TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 982305..982607 Dehalococcoides mccartyi BAV1 5131958 YP_001214449.1 CDS DehaBAV1_0991 NC_009455.1 982610 983080 D hypothetical protein 982610..983080 Dehalococcoides mccartyi BAV1 5131030 YP_001214450.1 CDS DehaBAV1_0992 NC_009455.1 983101 983373 R hypothetical protein complement(983101..983373) Dehalococcoides mccartyi BAV1 5131451 YP_001214451.1 CDS DehaBAV1_0993 NC_009455.1 983394 984158 D PFAM: protein of unknown function DUF105; hypothetical protein 983394..984158 Dehalococcoides mccartyi BAV1 5131381 YP_001214452.1 CDS DehaBAV1_0994 NC_009455.1 984314 984946 R acetyltransferase complement(984314..984946) Dehalococcoides mccartyi BAV1 5131453 YP_001214453.1 CDS DehaBAV1_0995 NC_009455.1 985258 985905 R PFAM: BioY protein; BioY protein complement(985258..985905) Dehalococcoides mccartyi BAV1 5131962 YP_001214454.1 CDS DehaBAV1_0996 NC_009455.1 985958 986194 R hypothetical protein complement(985958..986194) Dehalococcoides mccartyi BAV1 5131131 YP_001214455.1 CDS DehaBAV1_0997 NC_009455.1 986338 986589 D hypothetical protein 986338..986589 Dehalococcoides mccartyi BAV1 5131027 YP_001214456.1 CDS ribH NC_009455.1 986586 987053 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(986586..987053) Dehalococcoides mccartyi BAV1 5131035 YP_001214457.1 CDS DehaBAV1_0999 NC_009455.1 987082 988293 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; GTP cyclohydrolase II complement(987082..988293) Dehalococcoides mccartyi BAV1 5131017 YP_001214458.1 CDS DehaBAV1_1000 NC_009455.1 988326 988943 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(988326..988943) Dehalococcoides mccartyi BAV1 5131981 YP_001214459.1 CDS DehaBAV1_1001 NC_009455.1 988946 990043 R TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase complement(988946..990043) Dehalococcoides mccartyi BAV1 5131909 YP_001214460.1 CDS DehaBAV1_1002 NC_009455.1 990189 990953 R PFAM: protein of unknown function DUF541; hypothetical protein complement(990189..990953) Dehalococcoides mccartyi BAV1 5131291 YP_001214461.1 CDS DehaBAV1_1003 NC_009455.1 991066 991635 D TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 991066..991635 Dehalococcoides mccartyi BAV1 5131104 YP_001214462.1 CDS pyrE NC_009455.1 991638 992201 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 991638..992201 Dehalococcoides mccartyi BAV1 5131384 YP_001214463.1 CDS DehaBAV1_1005 NC_009455.1 992230 992757 D secreted endonuclease distantly related to Holliday junction resolvase-like protein 992230..992757 Dehalococcoides mccartyi BAV1 5132442 YP_001214464.1 CDS DehaBAV1_1006 NC_009455.1 992754 994454 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein, C-terminal domain protein; DNA mismatch repair protein MutL complement(992754..994454) Dehalococcoides mccartyi BAV1 5131455 YP_001214465.1 CDS DehaBAV1_1007 NC_009455.1 994553 996769 R PFAM: UvrD/REP helicase; UvrD/REP helicase complement(994553..996769) Dehalococcoides mccartyi BAV1 5131988 YP_001214466.1 CDS DehaBAV1_1008 NC_009455.1 997037 997585 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 997037..997585 Dehalococcoides mccartyi BAV1 5131119 YP_001214467.1 CDS pyrB NC_009455.1 997588 998583 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 997588..998583 Dehalococcoides mccartyi BAV1 5131054 YP_001214468.1 CDS pyrC NC_009455.1 998586 999872 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 998586..999872 Dehalococcoides mccartyi BAV1 5131133 YP_001214469.1 CDS DehaBAV1_1011 NC_009455.1 999908 1001002 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 999908..1001002 Dehalococcoides mccartyi BAV1 5132089 YP_001214470.1 CDS DehaBAV1_1012 NC_009455.1 1001058 1004297 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; carbamoyl-phosphate synthase large subunit 1001058..1004297 Dehalococcoides mccartyi BAV1 5131959 YP_001214471.1 CDS DehaBAV1_1013 NC_009455.1 1004307 1005092 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 1004307..1005092 Dehalococcoides mccartyi BAV1 5132035 YP_001214472.1 CDS folE NC_009455.1 1005174 1005743 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(1005174..1005743) Dehalococcoides mccartyi BAV1 5131389 YP_001214473.1 CDS DehaBAV1_1015 NC_009455.1 1005777 1006823 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(1005777..1006823) Dehalococcoides mccartyi BAV1 5131028 YP_001214474.1 CDS DehaBAV1_1016 NC_009455.1 1006832 1008133 R PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; homoserine dehydrogenase complement(1006832..1008133) Dehalococcoides mccartyi BAV1 5131245 YP_001214475.1 CDS DehaBAV1_1017 NC_009455.1 1008151 1009419 R hypothetical protein complement(1008151..1009419) Dehalococcoides mccartyi BAV1 5132019 YP_001214476.1 CDS DehaBAV1_1018 NC_009455.1 1009723 1010808 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; nucleotidyl transferase 1009723..1010808 Dehalococcoides mccartyi BAV1 5131905 YP_001214477.1 CDS DehaBAV1_1019 NC_009455.1 1010833 1012791 D TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetyl-coenzyme A synthetase 1010833..1012791 Dehalococcoides mccartyi BAV1 5131224 YP_001214478.1 CDS prfA NC_009455.1 1012910 1013977 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1012910..1013977 Dehalococcoides mccartyi BAV1 5131435 YP_001214479.1 CDS DehaBAV1_1021 NC_009455.1 1013977 1014810 D TIGRFAM: modification methylase, HemK family; PFAM: putative RNA methylase; methyltransferase small; HemK family modification methylase 1013977..1014810 Dehalococcoides mccartyi BAV1 5131383 YP_001214480.1 CDS DehaBAV1_1022 NC_009455.1 1014895 1016946 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(1014895..1016946) Dehalococcoides mccartyi BAV1 5131953 YP_001214481.1 CDS DehaBAV1_1023 NC_009455.1 1017026 1017622 R PFAM: protein of unknown function DUF95, transmembrane; hypothetical protein complement(1017026..1017622) Dehalococcoides mccartyi BAV1 5131287 YP_001214482.1 CDS DehaBAV1_1024 NC_009455.1 1017700 1017966 R hypothetical protein complement(1017700..1017966) Dehalococcoides mccartyi BAV1 5131378 YP_001214483.1 CDS DehaBAV1_1025 NC_009455.1 1018000 1018908 R TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; tyrosine recombinase XerD subunit complement(1018000..1018908) Dehalococcoides mccartyi BAV1 5131312 YP_001214484.1 CDS uvrC NC_009455.1 1019074 1020897 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1019074..1020897 Dehalococcoides mccartyi BAV1 5131335 YP_001214485.1 CDS DehaBAV1_1027 NC_009455.1 1020975 1021466 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1020975..1021466 Dehalococcoides mccartyi BAV1 5131982 YP_001214486.1 CDS DehaBAV1_1028 NC_009455.1 1021478 1022293 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; cof family hydrolase complement(1021478..1022293) Dehalococcoides mccartyi BAV1 5131918 YP_001214487.1 CDS DehaBAV1_1029 NC_009455.1 1022455 1025031 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1022455..1025031 Dehalococcoides mccartyi BAV1 5131268 YP_001214488.1 CDS DehaBAV1_1030 NC_009455.1 1025028 1025246 R hypothetical protein complement(1025028..1025246) Dehalococcoides mccartyi BAV1 5131434 YP_001214489.1 CDS DehaBAV1_1031 NC_009455.1 1025486 1025854 D hypothetical protein 1025486..1025854 Dehalococcoides mccartyi BAV1 5131336 YP_001214490.1 CDS DehaBAV1_1032 NC_009455.1 1025915 1026676 R PFAM: fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(1025915..1026676) Dehalococcoides mccartyi BAV1 5131452 YP_001214491.1 CDS DehaBAV1_1033 NC_009455.1 1026840 1027385 D PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)yrinic acid a,c-diamide adenosyltransferase 1026840..1027385 Dehalococcoides mccartyi BAV1 5131055 YP_001214492.1 CDS DehaBAV1_1034 NC_009455.1 1027406 1028503 D PFAM: protein of unknown function DUF100; D-fructose 1,6-bisphosphatase 1027406..1028503 Dehalococcoides mccartyi BAV1 5131023 YP_001214493.1 CDS DehaBAV1_1035 NC_009455.1 1028507 1029106 D TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1028507..1029106 Dehalococcoides mccartyi BAV1 5131978 YP_001214494.1 CDS DehaBAV1_1036 NC_009455.1 1029280 1030416 D TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 1029280..1030416 Dehalococcoides mccartyi BAV1 5131257 YP_001214495.1 CDS DehaBAV1_1037 NC_009455.1 1030391 1031905 R PFAM: Resolvase, N-terminal domain; Recombinase; resolvase domain-containing protein complement(1030391..1031905) Dehalococcoides mccartyi BAV1 5131057 YP_001214496.1 CDS DehaBAV1_1038 NC_009455.1 1031928 1032515 R hypothetical protein complement(1031928..1032515) Dehalococcoides mccartyi BAV1 5131443 YP_001214497.1 CDS DehaBAV1_1039 NC_009455.1 1032621 1032878 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin complement(1032621..1032878) Dehalococcoides mccartyi BAV1 5131449 YP_001214498.1 CDS DehaBAV1_1040 NC_009455.1 1032881 1033132 R hypothetical protein complement(1032881..1033132) Dehalococcoides mccartyi BAV1 5131371 YP_001214499.1 CDS DehaBAV1_1041 NC_009455.1 1033205 1034365 R hypothetical protein complement(1033205..1034365) Dehalococcoides mccartyi BAV1 5131984 YP_001214500.1 CDS DehaBAV1_1042 NC_009455.1 1034805 1035632 R hypothetical protein complement(1034805..1035632) Dehalococcoides mccartyi BAV1 5131396 YP_001214501.1 CDS DehaBAV1_1043 NC_009455.1 1035825 1038026 D PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1035825..1038026 Dehalococcoides mccartyi BAV1 5132405 YP_001214502.1 CDS DehaBAV1_1044 NC_009455.1 1038026 1040707 D PFAM: type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 1038026..1040707 Dehalococcoides mccartyi BAV1 5131520 YP_001214503.1 CDS DehaBAV1_1045 NC_009455.1 1041208 1042422 D hypothetical protein 1041208..1042422 Dehalococcoides mccartyi BAV1 5131591 YP_001214504.1 CDS DehaBAV1_1046 NC_009455.1 1042456 1042695 R hypothetical protein complement(1042456..1042695) Dehalococcoides mccartyi BAV1 5132137 YP_001214505.1 CDS DehaBAV1_1047 NC_009455.1 1043609 1044559 R hypothetical protein complement(1043609..1044559) Dehalococcoides mccartyi BAV1 5131294 YP_001214506.1 CDS DehaBAV1_1048 NC_009455.1 1044575 1045537 D hypothetical protein 1044575..1045537 Dehalococcoides mccartyi BAV1 5131330 YP_001214507.1 CDS DehaBAV1_1049 NC_009455.1 1045671 1046033 D hypothetical protein 1045671..1046033 Dehalococcoides mccartyi BAV1 5131951 YP_001214508.1 CDS DehaBAV1_1050 NC_009455.1 1046008 1046976 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 1046008..1046976 Dehalococcoides mccartyi BAV1 5131499 YP_001214509.1 CDS DehaBAV1_1051 NC_009455.1 1047110 1047364 D PFAM: Smr protein/MutS2; Smr protein/MutS2 1047110..1047364 Dehalococcoides mccartyi BAV1 5132446 YP_001214510.1 CDS DehaBAV1_1052 NC_009455.1 1047530 1048384 D TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; formyltetrahydrofolate deformylase 1047530..1048384 Dehalococcoides mccartyi BAV1 5131086 YP_001214511.1 CDS DehaBAV1_1053 NC_009455.1 1048629 1049255 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; peptidylprolyl isomerase 1048629..1049255 Dehalococcoides mccartyi BAV1 5131911 YP_001214512.1 CDS DehaBAV1_1054 NC_009455.1 1049511 1050575 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 1049511..1050575 Dehalococcoides mccartyi BAV1 5131750 YP_001214513.1 CDS DehaBAV1_1055 NC_009455.1 1050595 1051131 R TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(1050595..1051131) Dehalococcoides mccartyi BAV1 5131388 YP_001214514.1 CDS DehaBAV1_1056 NC_009455.1 1051128 1051502 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; a fusion protein of this enzyme with MsrA and thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase B complement(1051128..1051502) Dehalococcoides mccartyi BAV1 5132439 YP_001214515.1 CDS DehaBAV1_1057 NC_009455.1 1051637 1052209 R PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(1051637..1052209) Dehalococcoides mccartyi BAV1 5131246 YP_001214516.1 CDS DehaBAV1_1058 NC_009455.1 1052428 1052763 R PFAM: TfoX, N-terminal domain protein; TfoX domain-containing protein complement(1052428..1052763) Dehalococcoides mccartyi BAV1 5131254 YP_001214517.1 CDS DehaBAV1_1059 NC_009455.1 1052785 1053252 R hypothetical protein complement(1052785..1053252) Dehalococcoides mccartyi BAV1 5131232 YP_001214518.1 CDS DehaBAV1_1060 NC_009455.1 1053546 1053836 D PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; ArsR family transcriptional regulator 1053546..1053836 Dehalococcoides mccartyi BAV1 5132383 YP_001214519.1 CDS DehaBAV1_1061 NC_009455.1 1053836 1054501 D PFAM: protein of unknown function DUF1648; hypothetical protein 1053836..1054501 Dehalococcoides mccartyi BAV1 5131754 YP_001214520.1 CDS DehaBAV1_1062 NC_009455.1 1054644 1054838 D hypothetical protein 1054644..1054838 Dehalococcoides mccartyi BAV1 5131749 YP_001214521.1 CDS DehaBAV1_1063 NC_009455.1 1054851 1055411 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(1054851..1055411) Dehalococcoides mccartyi BAV1 5131745 YP_001214522.1 CDS DehaBAV1_1064 NC_009455.1 1055423 1055761 D hypothetical protein 1055423..1055761 Dehalococcoides mccartyi BAV1 5132435 YP_001214523.1 CDS DehaBAV1_1065 NC_009455.1 1055918 1056118 D hypothetical protein 1055918..1056118 Dehalococcoides mccartyi BAV1 5131236 YP_001214524.1 CDS DehaBAV1_1066 NC_009455.1 1056343 1057419 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 1056343..1057419 Dehalococcoides mccartyi BAV1 5131795 YP_001214525.1 CDS argJ NC_009455.1 1057492 1058727 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1057492..1058727 Dehalococcoides mccartyi BAV1 5132237 YP_001214526.1 CDS DehaBAV1_1068 NC_009455.1 1058734 1059552 D TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; N-acetylglutamate kinase 1058734..1059552 Dehalococcoides mccartyi BAV1 5131960 YP_001214527.1 CDS DehaBAV1_1069 NC_009455.1 1059625 1060821 D catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1059625..1060821 Dehalococcoides mccartyi BAV1 5131274 YP_001214528.1 CDS DehaBAV1_1070 NC_009455.1 1060828 1061718 D hypothetical protein 1060828..1061718 Dehalococcoides mccartyi BAV1 5132072 YP_001214529.1 CDS DehaBAV1_1071 NC_009455.1 1061781 1063001 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1061781..1063001 Dehalococcoides mccartyi BAV1 5131828 YP_001214530.1 CDS DehaBAV1_1072 NC_009455.1 1063002 1064387 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1063002..1064387 Dehalococcoides mccartyi BAV1 5132025 YP_001214531.1 CDS rpmB NC_009455.1 1064397 1064585 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(1064397..1064585) Dehalococcoides mccartyi BAV1 5131284 YP_001214532.1 CDS DehaBAV1_1074 NC_009455.1 1064714 1066348 D PFAM: Dak phosphatase; Dak phosphatase 1064714..1066348 Dehalococcoides mccartyi BAV1 5131048 YP_001214533.1 CDS DehaBAV1_1075 NC_009455.1 1066358 1067197 D TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein 1066358..1067197 Dehalococcoides mccartyi BAV1 5131423 YP_001214534.1 CDS DehaBAV1_1076 NC_009455.1 1067214 1068056 D TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein 1067214..1068056 Dehalococcoides mccartyi BAV1 5131431 YP_001214535.1 CDS DehaBAV1_1077 NC_009455.1 1068081 1068926 D TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein 1068081..1068926 Dehalococcoides mccartyi BAV1 5131450 YP_001214536.1 CDS DehaBAV1_1078 NC_009455.1 1068956 1069888 D TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein 1068956..1069888 Dehalococcoides mccartyi BAV1 5131837 YP_001214537.1 CDS DehaBAV1_1079 NC_009455.1 1070015 1072471 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1070015..1072471 Dehalococcoides mccartyi BAV1 5131858 YP_001214538.1 CDS DehaBAV1_1080 NC_009455.1 1072479 1073165 D PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 1072479..1073165 Dehalococcoides mccartyi BAV1 5131969 YP_001214539.1 CDS argS NC_009455.1 1073282 1074952 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1073282..1074952 Dehalococcoides mccartyi BAV1 5131056 YP_001214540.1 CDS DehaBAV1_1082 NC_009455.1 1075045 1075275 R PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator complement(1075045..1075275) Dehalococcoides mccartyi BAV1 5131067 YP_001214541.1 CDS DehaBAV1_1083 NC_009455.1 1075436 1076275 D enoyl-(acyl carrier protein) reductase 1075436..1076275 Dehalococcoides mccartyi BAV1 5131016 YP_001214542.1 CDS DehaBAV1_1084 NC_009455.1 1076306 1076509 D hypothetical protein 1076306..1076509 Dehalococcoides mccartyi BAV1 5131935 YP_001214543.1 CDS DehaBAV1_1085 NC_009455.1 1076585 1077028 D metal-binding protein 1076585..1077028 Dehalococcoides mccartyi BAV1 5131405 YP_001214544.1 CDS rpmF NC_009455.1 1077033 1077251 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1077033..1077251 Dehalococcoides mccartyi BAV1 5131039 YP_001214545.1 CDS DehaBAV1_1087 NC_009455.1 1077277 1078209 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; ACP S-malonyltransferase 1077277..1078209 Dehalococcoides mccartyi BAV1 5131997 YP_001214546.1 CDS DehaBAV1_1088 NC_009455.1 1078209 1078961 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; 3-oxoacyl-ACP reductase 1078209..1078961 Dehalococcoides mccartyi BAV1 5131906 YP_001214547.1 CDS DehaBAV1_1089 NC_009455.1 1078973 1079404 D TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 1078973..1079404 Dehalococcoides mccartyi BAV1 5131276 YP_001214548.1 CDS acpP NC_009455.1 1079409 1079669 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1079409..1079669 Dehalococcoides mccartyi BAV1 5131873 YP_001214549.1 CDS DehaBAV1_1091 NC_009455.1 1079934 1081445 R PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(1079934..1081445) Dehalococcoides mccartyi BAV1 5131235 YP_001214550.1 CDS DehaBAV1_1092 NC_009455.1 1081517 1084963 R TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor complement(1081517..1084963) Dehalococcoides mccartyi BAV1 5131919 YP_001214551.1 CDS DehaBAV1_1093 NC_009455.1 1085113 1086234 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1085113..1086234 Dehalococcoides mccartyi BAV1 5131379 YP_001214552.1 CDS DehaBAV1_1094 NC_009455.1 1086247 1086513 D hypothetical protein 1086247..1086513 Dehalococcoides mccartyi BAV1 5131992 YP_001214553.1 CDS DehaBAV1_1095 NC_009455.1 1086510 1086836 D hypothetical protein 1086510..1086836 Dehalococcoides mccartyi BAV1 5131249 YP_001214554.1 CDS DehaBAV1_1096 NC_009455.1 1086876 1088060 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; 2-alkenal reductase complement(1086876..1088060) Dehalococcoides mccartyi BAV1 5132164 YP_001214555.1 CDS DehaBAV1_1097 NC_009455.1 1088150 1088992 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap complement(1088150..1088992) Dehalococcoides mccartyi BAV1 5131385 YP_001214556.1 CDS DehaBAV1_1098 NC_009455.1 1089183 1089953 R PFAM: regulatory protein, MerR; TipAS antibiotic-recognition domain protein; MerR family transcriptional regulator complement(1089183..1089953) Dehalococcoides mccartyi BAV1 5131424 YP_001214557.1 CDS proA NC_009455.1 1090057 1091331 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1090057..1091331 Dehalococcoides mccartyi BAV1 5131357 YP_001214558.1 CDS rph NC_009455.1 1091413 1092138 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(1091413..1092138) Dehalococcoides mccartyi BAV1 5131970 YP_001214559.1 CDS DehaBAV1_1101 NC_009455.1 1092219 1092629 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(1092219..1092629) Dehalococcoides mccartyi BAV1 5131332 YP_001214560.1 CDS DehaBAV1_1102 NC_009455.1 1092622 1093131 R PFAM: CinA domain protein; competence/damage-inducible protein cinA complement(1092622..1093131) Dehalococcoides mccartyi BAV1 5131430 YP_001214561.1 CDS DehaBAV1_1103 NC_009455.1 1093161 1093454 D PFAM: protein of unknown function DUF167; hypothetical protein 1093161..1093454 Dehalococcoides mccartyi BAV1 5131097 YP_001214562.1 CDS DehaBAV1_1104 NC_009455.1 1093402 1094586 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase complement(1093402..1094586) Dehalococcoides mccartyi BAV1 5131100 YP_001214563.1 CDS DehaBAV1_1105 NC_009455.1 1094586 1095314 R hypothetical protein complement(1094586..1095314) Dehalococcoides mccartyi BAV1 5131337 YP_001214564.1 CDS DehaBAV1_1106 NC_009455.1 1095463 1096005 R TIGRFAM: DNA binding domain, excisionase family; PFAM: response regulator receiver; Prophage CP4-57 regulatory; response regulator receiver protein complement(1095463..1096005) Dehalococcoides mccartyi BAV1 5131929 YP_001214565.1 CDS DehaBAV1_1107 NC_009455.1 1096381 1097490 D dienelactone hydrolase-like protein 1096381..1097490 Dehalococcoides mccartyi BAV1 5131053 YP_001214566.1 CDS DehaBAV1_1108 NC_009455.1 1097586 1097906 R hypothetical protein complement(1097586..1097906) Dehalococcoides mccartyi BAV1 5131915 YP_001214567.1 CDS DehaBAV1_1109 NC_009455.1 1098230 1100098 D TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; small GTP-binding protein 1098230..1100098 Dehalococcoides mccartyi BAV1 5131134 YP_001214568.1 CDS DehaBAV1_1110 NC_009455.1 1100316 1101722 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; general substrate transporter complement(1100316..1101722) Dehalococcoides mccartyi BAV1 5131066 YP_001214569.1 CDS DehaBAV1_1111 NC_009455.1 1101790 1102227 R PFAM: UspA domain protein; UspA domain-containing protein complement(1101790..1102227) Dehalococcoides mccartyi BAV1 5131348 YP_001214570.1 CDS DehaBAV1_1113 NC_009455.1 1103547 1103951 R PFAM: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(1103547..1103951) Dehalococcoides mccartyi BAV1 5131957 YP_001214571.1 CDS DehaBAV1_1114 NC_009455.1 1104182 1104745 D hypothetical protein 1104182..1104745 Dehalococcoides mccartyi BAV1 5131338 YP_001214572.1 CDS DehaBAV1_1115 NC_009455.1 1104812 1105159 R hypothetical protein complement(1104812..1105159) Dehalococcoides mccartyi BAV1 5132096 YP_001214573.1 CDS DehaBAV1_1116 NC_009455.1 1105355 1105810 D hypothetical protein 1105355..1105810 Dehalococcoides mccartyi BAV1 5131314 YP_001214574.1 CDS DehaBAV1_1117 NC_009455.1 1106002 1106190 D PFAM: protein of unknown function DUF1508; hypothetical protein 1106002..1106190 Dehalococcoides mccartyi BAV1 5132005 YP_001214575.1 CDS DehaBAV1_1118 NC_009455.1 1106285 1107112 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(1106285..1107112) Dehalococcoides mccartyi BAV1 5131375 YP_001214576.1 CDS DehaBAV1_1119 NC_009455.1 1107102 1108475 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; recombination factor protein RarA complement(1107102..1108475) Dehalococcoides mccartyi BAV1 5131395 YP_001214577.1 CDS DehaBAV1_1120 NC_009455.1 1108447 1108995 R hypothetical protein complement(1108447..1108995) Dehalococcoides mccartyi BAV1 5132003 YP_001214578.1 CDS DehaBAV1_1121 NC_009455.1 1109009 1109284 R hypothetical protein complement(1109009..1109284) Dehalococcoides mccartyi BAV1 5131956 YP_001214579.1 CDS DehaBAV1_1122 NC_009455.1 1109405 1110721 R PFAM: AMMECR1 domain protein; protein of unknown function DUF52; hypothetical protein complement(1109405..1110721) Dehalococcoides mccartyi BAV1 5131367 YP_001214580.1 CDS DehaBAV1_1123 NC_009455.1 1110721 1111758 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(1110721..1111758) Dehalococcoides mccartyi BAV1 5132017 YP_001214581.1 CDS DehaBAV1_1124 NC_009455.1 1111832 1112701 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(1111832..1112701) Dehalococcoides mccartyi BAV1 5131971 YP_001214582.1 CDS DehaBAV1_1125 NC_009455.1 1113099 1113323 D hypothetical protein 1113099..1113323 Dehalococcoides mccartyi BAV1 5131952 YP_001214583.1 CDS DehaBAV1_1126 NC_009455.1 1113415 1113906 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(1113415..1113906) Dehalococcoides mccartyi BAV1 5131247 YP_001214584.1 CDS DehaBAV1_1127 NC_009455.1 1114066 1114521 D hypothetical protein 1114066..1114521 Dehalococcoides mccartyi BAV1 5131989 YP_001214585.1 CDS DehaBAV1_1128 NC_009455.1 1114551 1115120 D hypothetical protein 1114551..1115120 Dehalococcoides mccartyi BAV1 5131315 YP_001214586.1 CDS DehaBAV1_1129 NC_009455.1 1115573 1116304 R SMART: AAA ATPase; ATPase AAA complement(1115573..1116304) Dehalococcoides mccartyi BAV1 5131428 YP_001214587.1 CDS DehaBAV1_1130 NC_009455.1 1116451 1116999 D PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1116451..1116999 Dehalococcoides mccartyi BAV1 5131382 YP_001214588.1 CDS DehaBAV1_1131 NC_009455.1 1116990 1117793 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1116990..1117793) Dehalococcoides mccartyi BAV1 5131456 YP_001214589.1 CDS DehaBAV1_1132 NC_009455.1 1117917 1118060 R hypothetical protein complement(1117917..1118060) Dehalococcoides mccartyi BAV1 5131980 YP_001214590.1 CDS DehaBAV1_1133 NC_009455.1 1118082 1118303 R hypothetical protein complement(1118082..1118303) Dehalococcoides mccartyi BAV1 5132366 YP_001214591.1 CDS DehaBAV1_1134 NC_009455.1 1118555 1119151 D TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 1118555..1119151 Dehalococcoides mccartyi BAV1 5131273 YP_001214592.1 CDS DehaBAV1_1135 NC_009455.1 1119126 1120034 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(1119126..1120034) Dehalococcoides mccartyi BAV1 5131961 YP_001214593.1 CDS rplU NC_009455.1 1120259 1120663 D PFAM: ribosomal protein L21; 50S ribosomal protein L21 1120259..1120663 Dehalococcoides mccartyi BAV1 5132039 YP_001214594.1 CDS rpmA NC_009455.1 1120653 1120907 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1120653..1120907 Dehalococcoides mccartyi BAV1 5132020 YP_001214595.1 CDS rpmE NC_009455.1 1120914 1121120 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1120914..1121120 Dehalococcoides mccartyi BAV1 5132249 YP_001214596.1 CDS DehaBAV1_1139 NC_009455.1 1121200 1122120 D PFAM: protein of unknown function DUF1385; hypothetical protein 1121200..1122120 Dehalococcoides mccartyi BAV1 5132430 YP_001214597.1 CDS DehaBAV1_1140 NC_009455.1 1122113 1122427 R PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(1122113..1122427) Dehalococcoides mccartyi BAV1 5131518 YP_001214598.1 CDS DehaBAV1_1141 NC_009455.1 1122558 1123016 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1122558..1123016 Dehalococcoides mccartyi BAV1 5131272 YP_001214599.1 CDS DehaBAV1_1142 NC_009455.1 1123023 1123799 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(1123023..1123799) Dehalococcoides mccartyi BAV1 5131301 YP_001214600.1 CDS DehaBAV1_1143 NC_009455.1 1123763 1124005 R hypothetical protein complement(1123763..1124005) Dehalococcoides mccartyi BAV1 5131304 YP_001214601.1 CDS DehaBAV1_1144 NC_009455.1 1124085 1124465 R PFAM: protein of unknown function DUF107; hypothetical protein complement(1124085..1124465) Dehalococcoides mccartyi BAV1 5131373 YP_001214602.1 CDS DehaBAV1_1145 NC_009455.1 1124574 1124861 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 1124574..1124861 Dehalococcoides mccartyi BAV1 5131295 YP_001214603.1 CDS gatA NC_009455.1 1124861 1126321 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1124861..1126321 Dehalococcoides mccartyi BAV1 5131642 YP_001214604.1 CDS DehaBAV1_1147 NC_009455.1 1126338 1126802 D hypothetical protein 1126338..1126802 Dehalococcoides mccartyi BAV1 5131014 YP_001214605.1 CDS DehaBAV1_1148 NC_009455.1 1126926 1127300 D hypothetical protein 1126926..1127300 Dehalococcoides mccartyi BAV1 5131047 YP_001214606.1 CDS DehaBAV1_1149 NC_009455.1 1127306 1127515 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1127306..1127515 Dehalococcoides mccartyi BAV1 5131051 YP_001214607.1 CDS DehaBAV1_1150 NC_009455.1 1127512 1128432 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1127512..1128432 Dehalococcoides mccartyi BAV1 5131789 YP_001214608.1 CDS DehaBAV1_1151 NC_009455.1 1128432 1129127 D PFAM: ABC-2 type transporter; ABC-2 type transporter 1128432..1129127 Dehalococcoides mccartyi BAV1 5131120 YP_001214609.1 CDS DehaBAV1_1152 NC_009455.1 1129265 1129747 D PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 1129265..1129747 Dehalococcoides mccartyi BAV1 5131279 YP_001214610.1 CDS DehaBAV1_1153 NC_009455.1 1129770 1130966 D PFAM: aminotransferase, class I and II; aminotransferase 1129770..1130966 Dehalococcoides mccartyi BAV1 5131372 YP_001214611.1 CDS DehaBAV1_1154 NC_009455.1 1131046 1132017 R TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase complement(1131046..1132017) Dehalococcoides mccartyi BAV1 5131329 YP_001214612.1 CDS DehaBAV1_1155 NC_009455.1 1132072 1132926 R TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase complement(1132072..1132926) Dehalococcoides mccartyi BAV1 5131700 YP_001214613.1 CDS DehaBAV1_1156 NC_009455.1 1133012 1134022 D catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase 1133012..1134022 Dehalococcoides mccartyi BAV1 5131522 YP_001214614.1 CDS DehaBAV1_1157 NC_009455.1 1134019 1134951 D PFAM: PfkB domain protein; 1-phosphofructokinase 1134019..1134951 Dehalococcoides mccartyi BAV1 5132193 YP_001214615.1 CDS DehaBAV1_1158 NC_009455.1 1134955 1135812 R hypothetical protein complement(1134955..1135812) Dehalococcoides mccartyi BAV1 5131216 YP_001214616.1 CDS DehaBAV1_1159 NC_009455.1 1135818 1136357 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(1135818..1136357) Dehalococcoides mccartyi BAV1 5132444 YP_001214617.1 CDS DehaBAV1_1160 NC_009455.1 1136407 1136568 R hypothetical protein complement(1136407..1136568) Dehalococcoides mccartyi BAV1 5131542 YP_001214618.1 CDS DehaBAV1_1161 NC_009455.1 1136724 1136948 D TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; MerR family transcriptional regulator 1136724..1136948 Dehalococcoides mccartyi BAV1 5131558 YP_001214619.1 CDS DehaBAV1_1162 NC_009455.1 1136964 1137641 D PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; two component LuxR family transcriptional regulator 1136964..1137641 Dehalococcoides mccartyi BAV1 5131259 YP_001214620.1 CDS DehaBAV1_1163 NC_009455.1 1137734 1140082 D PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type II secretion system protein E 1137734..1140082 Dehalococcoides mccartyi BAV1 5131339 YP_001214621.1 CDS DehaBAV1_1164 NC_009455.1 1140092 1141297 D PFAM: type II secretion system protein; type II secretion system protein 1140092..1141297 Dehalococcoides mccartyi BAV1 5131419 YP_001214622.1 CDS DehaBAV1_1165 NC_009455.1 1141310 1141765 D hypothetical protein 1141310..1141765 Dehalococcoides mccartyi BAV1 5132056 YP_001214623.1 CDS DehaBAV1_1166 NC_009455.1 1141762 1142316 D hypothetical protein 1141762..1142316 Dehalococcoides mccartyi BAV1 5132084 YP_001214624.1 CDS DehaBAV1_1167 NC_009455.1 1142347 1143474 D hypothetical protein 1142347..1143474 Dehalococcoides mccartyi BAV1 5131983 YP_001214625.1 CDS DehaBAV1_1168 NC_009455.1 1143589 1145196 D hypothetical protein 1143589..1145196 Dehalococcoides mccartyi BAV1 5131050 YP_001214626.1 CDS DehaBAV1_1169 NC_009455.1 1145206 1145781 D hypothetical protein 1145206..1145781 Dehalococcoides mccartyi BAV1 5131943 YP_001214627.1 CDS DehaBAV1_1170 NC_009455.1 1145787 1147244 D Tfp pilus assembly protein ATPase PilM-like protein 1145787..1147244 Dehalococcoides mccartyi BAV1 5131281 YP_001214628.1 CDS DehaBAV1_1171 NC_009455.1 1147261 1148376 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 1147261..1148376 Dehalococcoides mccartyi BAV1 5131775 YP_001214629.1 CDS DehaBAV1_1172 NC_009455.1 1148523 1148879 R hypothetical protein complement(1148523..1148879) Dehalococcoides mccartyi BAV1 5131438 YP_001214630.1 CDS DehaBAV1_1173 NC_009455.1 1149137 1149871 D PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; peptidase A24A domain-containing protein 1149137..1149871 Dehalococcoides mccartyi BAV1 5131296 YP_001214631.1 CDS DehaBAV1_1174 NC_009455.1 1149996 1152080 D catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; functions in mannosylglycerate biosynthesis; bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase 1149996..1152080 Dehalococcoides mccartyi BAV1 5131324 YP_001214632.1 CDS DehaBAV1_1175 NC_009455.1 1152266 1152766 D PFAM: RDD domain containing protein; RDD domain-containing protein 1152266..1152766 Dehalococcoides mccartyi BAV1 5131966 YP_001214633.1 CDS gltX NC_009455.1 1152827 1154290 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1152827..1154290 Dehalococcoides mccartyi BAV1 5131234 YP_001214634.1 CDS DehaBAV1_1177 NC_009455.1 1154496 1155065 D hypothetical protein 1154496..1155065 Dehalococcoides mccartyi BAV1 5131928 YP_001214635.1 CDS DehaBAV1_1178 NC_009455.1 1155165 1155422 D hypothetical protein 1155165..1155422 Dehalococcoides mccartyi BAV1 5132047 YP_001214636.1 CDS DehaBAV1_1179 NC_009455.1 1155424 1156428 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 1155424..1156428 Dehalococcoides mccartyi BAV1 5131289 YP_001214637.1 CDS DehaBAV1_1180 NC_009455.1 1156447 1156596 R hypothetical protein complement(1156447..1156596) Dehalococcoides mccartyi BAV1 5131991 YP_001214638.1 CDS DehaBAV1_1181 NC_009455.1 1156734 1157216 D PFAM: protein of unknown function UPF0054; hypothetical protein 1156734..1157216 Dehalococcoides mccartyi BAV1 5131297 YP_001214639.1 CDS DehaBAV1_1182 NC_009455.1 1157213 1157785 D PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1157213..1157785 Dehalococcoides mccartyi BAV1 5131280 YP_001214640.1 CDS DehaBAV1_1183 NC_009455.1 1157787 1158761 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(1157787..1158761) Dehalococcoides mccartyi BAV1 5131267 YP_001214641.1 CDS DehaBAV1_1184 NC_009455.1 1159057 1159428 D PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator 1159057..1159428 Dehalococcoides mccartyi BAV1 5131265 YP_001214642.1 CDS DehaBAV1_1185 NC_009455.1 1159455 1159937 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1159455..1159937 Dehalococcoides mccartyi BAV1 5131955 YP_001214643.1 CDS DehaBAV1_1186 NC_009455.1 1159924 1160826 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase D 1159924..1160826 Dehalococcoides mccartyi BAV1 5132011 YP_001214644.1 CDS DehaBAV1_1187 NC_009455.1 1160926 1161207 D hypothetical protein 1160926..1161207 Dehalococcoides mccartyi BAV1 5132022 YP_001214645.1 CDS DehaBAV1_1188 NC_009455.1 1161235 1161645 D hypothetical protein 1161235..1161645 Dehalococcoides mccartyi BAV1 5131814 YP_001214646.1 CDS DehaBAV1_1189 NC_009455.1 1161786 1162376 D hypothetical protein 1161786..1162376 Dehalococcoides mccartyi BAV1 5131695 YP_001214647.1 CDS DehaBAV1_1190 NC_009455.1 1162373 1164004 D PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter 1162373..1164004 Dehalococcoides mccartyi BAV1 5131698 YP_001214648.1 CDS DehaBAV1_1191 NC_009455.1 1164177 1166702 D TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; GAF sensor-containing diguanylate cyclase 1164177..1166702 Dehalococcoides mccartyi BAV1 5132281 YP_001214649.1 CDS DehaBAV1_1192 NC_009455.1 1166745 1167605 R TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(1166745..1167605) Dehalococcoides mccartyi BAV1 5131604 YP_001214650.1 CDS DehaBAV1_1193 NC_009455.1 1167607 1169154 R TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; L-aspartate oxidase complement(1167607..1169154) Dehalococcoides mccartyi BAV1 5131609 YP_001214651.1 CDS DehaBAV1_1194 NC_009455.1 1169176 1169454 R TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; protein translocase subunit yajC complement(1169176..1169454) Dehalococcoides mccartyi BAV1 5131511 YP_001214652.1 CDS DehaBAV1_1195 NC_009455.1 1169465 1170721 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(1169465..1170721) Dehalococcoides mccartyi BAV1 5131513 YP_001214653.1 CDS DehaBAV1_1196 NC_009455.1 1170818 1171162 R hypothetical protein complement(1170818..1171162) Dehalococcoides mccartyi BAV1 5131527 YP_001214654.1 CDS mscL NC_009455.1 1171418 1171882 D forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 1171418..1171882 Dehalococcoides mccartyi BAV1 5131517 YP_001214655.1 CDS DehaBAV1_1198 NC_009455.1 1172100 1172912 R TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycolase; DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase complement(1172100..1172912) Dehalococcoides mccartyi BAV1 5131945 YP_001214656.1 CDS DehaBAV1_1199 NC_009455.1 1172905 1173528 R PFAM: phosphoesterase, PA-phosphatase related; phosphoesterase, PA-phosphatase related complement(1172905..1173528) Dehalococcoides mccartyi BAV1 5131521 YP_001214657.1 CDS DehaBAV1_1200 NC_009455.1 1173537 1176248 R TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I complement(1173537..1176248) Dehalococcoides mccartyi BAV1 5131526 YP_001214658.1 CDS DehaBAV1_1201 NC_009455.1 1176411 1176857 R PFAM: Rhodanese domain protein; rhodanese domain-containing protein complement(1176411..1176857) Dehalococcoides mccartyi BAV1 5131530 YP_001214659.1 CDS DehaBAV1_1202 NC_009455.1 1176861 1177439 R hypothetical protein complement(1176861..1177439) Dehalococcoides mccartyi BAV1 5131626 YP_001214660.1 CDS DehaBAV1_1203 NC_009455.1 1177945 1178898 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1177945..1178898 Dehalococcoides mccartyi BAV1 5131545 YP_001214661.1 CDS engA NC_009455.1 1178919 1180247 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1178919..1180247 Dehalococcoides mccartyi BAV1 5131540 YP_001214662.1 CDS DehaBAV1_1205 NC_009455.1 1180241 1180891 D PFAM: protein of unknown function DUF205; membrane protein 1180241..1180891 Dehalococcoides mccartyi BAV1 5131546 YP_001214663.1 CDS gpsA NC_009455.1 1180940 1182019 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1180940..1182019 Dehalococcoides mccartyi BAV1 5131510 YP_001214664.1 CDS DehaBAV1_1207 NC_009455.1 1182023 1183102 R TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone protein DnaJ complement(1182023..1183102) Dehalococcoides mccartyi BAV1 5131562 YP_001214665.1 CDS dnaK NC_009455.1 1183254 1185164 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1183254..1185164) Dehalococcoides mccartyi BAV1 5132425 YP_001214666.1 CDS DehaBAV1_1209 NC_009455.1 1185200 1185763 R PFAM: GrpE protein; GrpE protein HSP-70 cofactor complement(1185200..1185763) Dehalococcoides mccartyi BAV1 5131550 YP_001214667.1 CDS DehaBAV1_1210 NC_009455.1 1185813 1186850 R TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA complement(1185813..1186850) Dehalococcoides mccartyi BAV1 5131539 YP_001214668.1 CDS DehaBAV1_1211 NC_009455.1 1187017 1187649 D Zn-dependent hydrolase of the beta-lactamase fold-like protein 1187017..1187649 Dehalococcoides mccartyi BAV1 5131533 YP_001214669.1 CDS DehaBAV1_1212 NC_009455.1 1187689 1189221 D hypothetical protein 1187689..1189221 Dehalococcoides mccartyi BAV1 5131523 YP_001214670.1 CDS DehaBAV1_1213 NC_009455.1 1189266 1189754 D exonuclease-like protein 1189266..1189754 Dehalococcoides mccartyi BAV1 5131547 YP_001214671.1 CDS DehaBAV1_1214 NC_009455.1 1190270 1193356 R hypothetical protein complement(1190270..1193356) Dehalococcoides mccartyi BAV1 5131532 YP_001214672.1 CDS rho NC_009455.1 1193631 1194905 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(1193631..1194905) Dehalococcoides mccartyi BAV1 5131933 YP_001214673.1 CDS DehaBAV1_1216 NC_009455.1 1194992 1195642 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase complement(1194992..1195642) Dehalococcoides mccartyi BAV1 5131508 YP_001214674.1 CDS pyrG NC_009455.1 1195681 1197315 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(1195681..1197315) Dehalococcoides mccartyi BAV1 5131559 YP_001214675.1 CDS DehaBAV1_1218 NC_009455.1 1197598 1198590 D PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein 1197598..1198590 Dehalococcoides mccartyi BAV1 5132067 YP_001214676.1 CDS DehaBAV1_1219 NC_009455.1 1198603 1198908 D PFAM: regulatory protein, MerR; MerR family transcriptional regulator 1198603..1198908 Dehalococcoides mccartyi BAV1 5131922 YP_001214677.1 CDS DehaBAV1_1220 NC_009455.1 1198913 1201351 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 1198913..1201351 Dehalococcoides mccartyi BAV1 5131036 YP_001214678.1 CDS DehaBAV1_1221 NC_009455.1 1201369 1202025 D hypothetical protein 1201369..1202025 Dehalococcoides mccartyi BAV1 5131940 YP_001214679.1 CDS DehaBAV1_1222 NC_009455.1 1202111 1203529 D TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase, class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 1202111..1203529 Dehalococcoides mccartyi BAV1 5131068 YP_001214680.1 CDS DehaBAV1_1223 NC_009455.1 1203603 1204667 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1203603..1204667 Dehalococcoides mccartyi BAV1 5131063 YP_001214681.1 CDS DehaBAV1_1224 NC_009455.1 1204664 1205284 D PFAM: Methyltransferase type 11; Methyltransferase type 12; methyltransferase type 11 1204664..1205284 Dehalococcoides mccartyi BAV1 5132276 YP_001214682.1 CDS purH NC_009455.1 1205313 1206854 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1205313..1206854 Dehalococcoides mccartyi BAV1 5131153 YP_001214683.1 CDS DehaBAV1_1226 NC_009455.1 1206872 1207873 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1206872..1207873 Dehalococcoides mccartyi BAV1 5132018 YP_001214684.1 CDS DehaBAV1_1227 NC_009455.1 1208058 1208306 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 1208058..1208306 Dehalococcoides mccartyi BAV1 5132010 YP_001214685.1 CDS arsM NC_009455.1 1208310 1209143 D in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase 1208310..1209143 Dehalococcoides mccartyi BAV1 5131404 YP_001214686.1 CDS DehaBAV1_1229 NC_009455.1 1209140 1210570 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase complement(1209140..1210570) Dehalococcoides mccartyi BAV1 5131921 YP_001214687.1 CDS DehaBAV1_1230 NC_009455.1 1210613 1211236 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(1210613..1211236) Dehalococcoides mccartyi BAV1 5131258 YP_001214688.1 CDS DehaBAV1_1231 NC_009455.1 1211239 1212417 R PFAM: peptidase M48, Ste24p; Ste24 endopeptidase complement(1211239..1212417) Dehalococcoides mccartyi BAV1 5132374 YP_001214689.1 CDS DehaBAV1_1232 NC_009455.1 1212417 1213061 R hypothetical protein complement(1212417..1213061) Dehalococcoides mccartyi BAV1 5131631 YP_001214690.1 CDS DehaBAV1_1233 NC_009455.1 1213042 1214316 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein complement(1213042..1214316) Dehalococcoides mccartyi BAV1 5131638 YP_001214691.1 CDS DehaBAV1_1234 NC_009455.1 1214435 1215415 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1214435..1215415 Dehalococcoides mccartyi BAV1 5132095 YP_001214692.1 CDS DehaBAV1_1235 NC_009455.1 1215908 1216204 D PFAM: chaperonin Cpn10; chaperonin Cpn10 1215908..1216204 Dehalococcoides mccartyi BAV1 5132101 YP_001214693.1 CDS groEL NC_009455.1 1216232 1217845 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1216232..1217845 Dehalococcoides mccartyi BAV1 5132024 YP_001214694.1 CDS DehaBAV1_1237 NC_009455.1 1217933 1219192 R PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein complement(1217933..1219192) Dehalococcoides mccartyi BAV1 5132127 YP_001214695.1 CDS DehaBAV1_1238 NC_009455.1 1219305 1219664 D TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; hydrogenase nickel incorporation protein HypA 1219305..1219664 Dehalococcoides mccartyi BAV1 5132195 YP_001214696.1 CDS DehaBAV1_1239 NC_009455.1 1219645 1220298 D TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; hydrogenase nickel incorporation protein HypB 1219645..1220298 Dehalococcoides mccartyi BAV1 5131592 YP_001214697.1 CDS DehaBAV1_1240 NC_009455.1 1220299 1222590 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; (NiFe) hydrogenase maturation protein HypF 1220299..1222590 Dehalococcoides mccartyi BAV1 5131593 YP_001214698.1 CDS DehaBAV1_1241 NC_009455.1 1222590 1222805 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 1222590..1222805 Dehalococcoides mccartyi BAV1 5131595 YP_001214699.1 CDS DehaBAV1_1242 NC_009455.1 1222809 1223903 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 1222809..1223903 Dehalococcoides mccartyi BAV1 5131596 YP_001214700.1 CDS DehaBAV1_1243 NC_009455.1 1223866 1224903 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; hydrogenase expression/formation protein HypE 1223866..1224903 Dehalococcoides mccartyi BAV1 5131594 YP_001214701.1 CDS DehaBAV1_1244 NC_009455.1 1225066 1225686 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1225066..1225686 Dehalococcoides mccartyi BAV1 5131598 YP_001214702.1 CDS DehaBAV1_1245 NC_009455.1 1225696 1226019 D hypothetical protein 1225696..1226019 Dehalococcoides mccartyi BAV1 5131599 YP_001214703.1 CDS DehaBAV1_1246 NC_009455.1 1226951 1227367 R hypothetical protein complement(1226951..1227367) Dehalococcoides mccartyi BAV1 5131936 YP_001214704.1 CDS DehaBAV1_1247 NC_009455.1 1227554 1227805 R hypothetical protein complement(1227554..1227805) Dehalococcoides mccartyi BAV1 5131934 YP_001214705.1 CDS DehaBAV1_1248 NC_009455.1 1227861 1228094 D hypothetical protein 1227861..1228094 Dehalococcoides mccartyi BAV1 5131605 YP_001214706.1 CDS DehaBAV1_1249 NC_009455.1 1228147 1228560 R TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(1228147..1228560) Dehalococcoides mccartyi BAV1 5131606 YP_001214707.1 CDS DehaBAV1_1250 NC_009455.1 1228730 1228870 R hypothetical protein complement(1228730..1228870) Dehalococcoides mccartyi BAV1 5131607 YP_001214708.1 CDS DehaBAV1_1251 NC_009455.1 1228961 1229572 R PFAM: multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein complement(1228961..1229572) Dehalococcoides mccartyi BAV1 5131612 YP_001214709.1 CDS DehaBAV1_1252 NC_009455.1 1229687 1230133 D PFAM: cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; cyclase/dehydrase 1229687..1230133 Dehalococcoides mccartyi BAV1 5131610 YP_001214710.1 CDS DehaBAV1_1253 NC_009455.1 1230138 1231115 R hypothetical protein complement(1230138..1231115) Dehalococcoides mccartyi BAV1 5131614 YP_001214711.1 CDS DehaBAV1_1254 NC_009455.1 1231304 1231705 D hypothetical protein 1231304..1231705 Dehalococcoides mccartyi BAV1 5131615 YP_001214712.1 CDS DehaBAV1_1255 NC_009455.1 1231880 1232536 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1231880..1232536 Dehalococcoides mccartyi BAV1 5131617 YP_001214713.1 CDS DehaBAV1_1256 NC_009455.1 1232550 1233401 D PFAM: amidohydrolase 2; amidohydrolase 2 1232550..1233401 Dehalococcoides mccartyi BAV1 5131618 YP_001214714.1 CDS DehaBAV1_1257 NC_009455.1 1233394 1233975 D TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; 2'-5' RNA ligase 1233394..1233975 Dehalococcoides mccartyi BAV1 5131619 YP_001214715.1 CDS DehaBAV1_1258 NC_009455.1 1234047 1234250 D hypothetical protein 1234047..1234250 Dehalococcoides mccartyi BAV1 5131541 YP_001214716.1 CDS DehaBAV1_1259 NC_009455.1 1234290 1234991 D amidophosphoribosyltransferase-like protein 1234290..1234991 Dehalococcoides mccartyi BAV1 5131524 YP_001214717.1 CDS DehaBAV1_1260 NC_009455.1 1235005 1235544 D TIGRFAM: ribosomal subunit interface protein; 30S ribosomal protein S30 1235005..1235544 Dehalococcoides mccartyi BAV1 5131551 YP_001214718.1 CDS DehaBAV1_1261 NC_009455.1 1235620 1236183 D TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 1235620..1236183 Dehalococcoides mccartyi BAV1 5131557 YP_001214719.1 CDS DehaBAV1_1262 NC_009455.1 1236161 1236544 R secreted protein-like protein complement(1236161..1236544) Dehalococcoides mccartyi BAV1 5131552 YP_001214720.1 CDS DehaBAV1_1263 NC_009455.1 1236567 1237385 R PFAM: DNA repair protein RadC; DNA repair protein RadC complement(1236567..1237385) Dehalococcoides mccartyi BAV1 5131531 YP_001214721.1 CDS DehaBAV1_1264 NC_009455.1 1237369 1237617 R hypothetical protein complement(1237369..1237617) Dehalococcoides mccartyi BAV1 5131572 YP_001214722.1 CDS DehaBAV1_1265 NC_009455.1 1237601 1241113 R TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III catalytic subunit, DnaE type complement(1237601..1241113) Dehalococcoides mccartyi BAV1 5131556 YP_001214723.1 CDS DehaBAV1_1266 NC_009455.1 1241260 1241970 D TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; hypothetical protein 1241260..1241970 Dehalococcoides mccartyi BAV1 5131519 YP_001214724.1 CDS DehaBAV1_1267 NC_009455.1 1242058 1242477 R hypothetical protein complement(1242058..1242477) Dehalococcoides mccartyi BAV1 5131544 YP_001214725.1 CDS DehaBAV1_1268 NC_009455.1 1242459 1242581 R hypothetical protein complement(1242459..1242581) Dehalococcoides mccartyi BAV1 5131529 YP_001214726.1 CDS DehaBAV1_1269 NC_009455.1 1242825 1243040 R TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein complement(1242825..1243040) Dehalococcoides mccartyi BAV1 5131554 YP_001214727.1 CDS DehaBAV1_1270 NC_009455.1 1243594 1243866 D hypothetical protein 1243594..1243866 Dehalococcoides mccartyi BAV1 5131891 YP_001214728.1 CDS DehaBAV1_1271 NC_009455.1 1244285 1245742 D TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; anthranilate synthase, component I 1244285..1245742 Dehalococcoides mccartyi BAV1 5131553 YP_001214729.1 CDS DehaBAV1_1272 NC_009455.1 1245726 1246316 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 1245726..1246316 Dehalococcoides mccartyi BAV1 5131548 YP_001214730.1 CDS trpD NC_009455.1 1246321 1247346 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1246321..1247346 Dehalococcoides mccartyi BAV1 5131579 YP_001214731.1 CDS trpC NC_009455.1 1247351 1248130 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 1247351..1248130 Dehalococcoides mccartyi BAV1 5131580 YP_001214732.1 CDS DehaBAV1_1275 NC_009455.1 1248172 1248786 D PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 1248172..1248786 Dehalococcoides mccartyi BAV1 5131586 YP_001214733.1 CDS DehaBAV1_1276 NC_009455.1 1248780 1249802 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 1248780..1249802 Dehalococcoides mccartyi BAV1 5131629 YP_001214734.1 CDS DehaBAV1_1277 NC_009455.1 1249790 1250989 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1249790..1250989 Dehalococcoides mccartyi BAV1 5131630 YP_001214735.1 CDS trpA NC_009455.1 1250986 1251753 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1250986..1251753 Dehalococcoides mccartyi BAV1 5131678 YP_001214736.1 CDS DehaBAV1_1279 NC_009455.1 1252036 1252623 D TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX; thymidylate synthase, flavin-dependent 1252036..1252623 Dehalococcoides mccartyi BAV1 5131675 YP_001214737.1 CDS DehaBAV1_1280 NC_009455.1 1252657 1253592 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1252657..1253592) Dehalococcoides mccartyi BAV1 5131673 YP_001214738.1 CDS DehaBAV1_1281 NC_009455.1 1253586 1254554 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; ABC transporter complement(1253586..1254554) Dehalococcoides mccartyi BAV1 5131668 YP_001214739.1 CDS DehaBAV1_1282 NC_009455.1 1254551 1255390 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1254551..1255390) Dehalococcoides mccartyi BAV1 5131664 YP_001214740.1 CDS DehaBAV1_1283 NC_009455.1 1255392 1256366 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1255392..1256366) Dehalococcoides mccartyi BAV1 5131639 YP_001214741.1 CDS DehaBAV1_1284 NC_009455.1 1256426 1258057 R PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(1256426..1258057) Dehalococcoides mccartyi BAV1 5132106 YP_001214742.1 CDS DehaBAV1_1285 NC_009455.1 1258062 1258883 R PFAM: Methyltransferase type 12; methyltransferase type 12 complement(1258062..1258883) Dehalococcoides mccartyi BAV1 5132111 YP_001214743.1 CDS DehaBAV1_1286 NC_009455.1 1259163 1259618 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1259163..1259618 Dehalococcoides mccartyi BAV1 5132183 YP_001214744.1 CDS DehaBAV1_1287 NC_009455.1 1259717 1259866 D hypothetical protein 1259717..1259866 Dehalococcoides mccartyi BAV1 5132239 YP_001214745.1 CDS DehaBAV1_1288 NC_009455.1 1259867 1260259 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1259867..1260259 Dehalococcoides mccartyi BAV1 5132171 YP_001214746.1 CDS DehaBAV1_1289 NC_009455.1 1260309 1261085 R PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein complement(1260309..1261085) Dehalococcoides mccartyi BAV1 5132198 YP_001214747.1 CDS DehaBAV1_1290 NC_009455.1 1261207 1261725 D hypothetical protein 1261207..1261725 Dehalococcoides mccartyi BAV1 5132227 YP_001214748.1 CDS DehaBAV1_1291 NC_009455.1 1261751 1262185 D PFAM: flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 1261751..1262185 Dehalococcoides mccartyi BAV1 5132292 YP_001214749.1 CDS DehaBAV1_1292 NC_009455.1 1262296 1263693 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(1262296..1263693) Dehalococcoides mccartyi BAV1 5132303 YP_001214750.1 CDS DehaBAV1_1293 NC_009455.1 1263745 1265475 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport B domain protein; nucleoside recognition domain protein; small GTP-binding protein complement(1263745..1265475) Dehalococcoides mccartyi BAV1 5132300 YP_001214751.1 CDS DehaBAV1_1294 NC_009455.1 1265472 1265717 R PFAM: FeoA family protein; FeoA family protein complement(1265472..1265717) Dehalococcoides mccartyi BAV1 5132267 YP_001214752.1 CDS DehaBAV1_1295 NC_009455.1 1265757 1266182 R PFAM: ferric-uptake regulator; ferric uptake regulator family protein complement(1265757..1266182) Dehalococcoides mccartyi BAV1 5132186 YP_001214753.1 CDS smpB NC_009455.1 1266227 1266775 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1266227..1266775 Dehalococcoides mccartyi BAV1 5132293 YP_001214754.1 CDS DehaBAV1_1297 NC_009455.1 1267062 1268729 R PFAM: Resolvase, N-terminal domain; Recombinase; resolvase domain-containing protein complement(1267062..1268729) Dehalococcoides mccartyi BAV1 5131900 YP_001214755.1 CDS DehaBAV1_1298 NC_009455.1 1268903 1269520 R PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; resolvase domain-containing protein complement(1268903..1269520) Dehalococcoides mccartyi BAV1 5132295 YP_001214756.1 CDS DehaBAV1_1299 NC_009455.1 1269520 1269882 R hypothetical protein complement(1269520..1269882) Dehalococcoides mccartyi BAV1 5132230 YP_001214757.1 CDS DehaBAV1_1300 NC_009455.1 1269949 1270227 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1269949..1270227 Dehalococcoides mccartyi BAV1 5132324 YP_001214758.1 CDS DehaBAV1_1301 NC_009455.1 1270368 1271063 D PFAM: Integrase, catalytic region; integrase catalytic subunit 1270368..1271063 Dehalococcoides mccartyi BAV1 5132373 YP_001214759.1 CDS DehaBAV1_1302 NC_009455.1 1271090 1271734 R hypothetical protein complement(1271090..1271734) Dehalococcoides mccartyi BAV1 5132248 YP_001214760.1 CDS DehaBAV1_1303 NC_009455.1 1272058 1272888 R PFAM: prephenate dehydratase; prephenate dehydratase complement(1272058..1272888) Dehalococcoides mccartyi BAV1 5132321 YP_001214761.1 CDS secG NC_009455.1 1274195 1274413 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(1274195..1274413) Dehalococcoides mccartyi BAV1 5132159 YP_001214762.1 CDS gatB NC_009455.1 1274416 1275906 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1274416..1275906) Dehalococcoides mccartyi BAV1 5132265 YP_001214763.1 CDS DehaBAV1_1308 NC_009455.1 1276198 1276899 D hypothetical protein 1276198..1276899 Dehalococcoides mccartyi BAV1 5131902 YP_001214764.1 CDS DehaBAV1_1309 NC_009455.1 1277076 1277264 R hypothetical protein complement(1277076..1277264) Dehalococcoides mccartyi BAV1 5132335 YP_001214765.1 CDS DehaBAV1_1310 NC_009455.1 1277261 1277518 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(1277261..1277518) Dehalococcoides mccartyi BAV1 5132377 YP_001214766.1 CDS DehaBAV1_1311 NC_009455.1 1277536 1278267 R PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(1277536..1278267) Dehalococcoides mccartyi BAV1 5132364 YP_001214767.1 CDS DehaBAV1_1312 NC_009455.1 1278340 1279380 R hypothetical protein complement(1278340..1279380) Dehalococcoides mccartyi BAV1 5132209 YP_001214768.1 CDS DehaBAV1_1313 NC_009455.1 1279594 1279893 R hypothetical protein complement(1279594..1279893) Dehalococcoides mccartyi BAV1 5132220 YP_001214769.1 CDS DehaBAV1_1314 NC_009455.1 1279893 1280285 R hypothetical protein complement(1279893..1280285) Dehalococcoides mccartyi BAV1 5132179 YP_001214770.1 CDS DehaBAV1_1315 NC_009455.1 1280347 1280484 D hypothetical protein 1280347..1280484 Dehalococcoides mccartyi BAV1 5132166 YP_001214771.1 CDS DehaBAV1_1316 NC_009455.1 1280526 1281041 R PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit complement(1280526..1281041) Dehalococcoides mccartyi BAV1 5132207 YP_001214772.1 CDS DehaBAV1_1317 NC_009455.1 1281052 1282632 R PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH-ubiquinone oxidoreductase, chain 49kDa complement(1281052..1282632) Dehalococcoides mccartyi BAV1 5132114 YP_001214773.1 CDS DehaBAV1_1318 NC_009455.1 1282636 1284117 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); hydrogenase membrane subunit complement(1282636..1284117) Dehalococcoides mccartyi BAV1 5132261 YP_001214774.1 CDS DehaBAV1_1319 NC_009455.1 1284117 1284797 R hydrogenase 4 membrane component (E)-like protein complement(1284117..1284797) Dehalococcoides mccartyi BAV1 5132263 YP_001214775.1 CDS DehaBAV1_1320 NC_009455.1 1284801 1285742 R formate hydrogenlyase subunit 4-like protein complement(1284801..1285742) Dehalococcoides mccartyi BAV1 5132245 YP_001214776.1 CDS DehaBAV1_1321 NC_009455.1 1285739 1287673 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); hydrogenase membrane subunit complement(1285739..1287673) Dehalococcoides mccartyi BAV1 5132233 YP_001214777.1 CDS mgsA NC_009455.1 1287951 1288382 D catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1287951..1288382 Dehalococcoides mccartyi BAV1 5132266 YP_001214778.1 CDS DehaBAV1_1323 NC_009455.1 1288570 1288812 D TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 1288570..1288812 Dehalococcoides mccartyi BAV1 5132286 YP_001214779.1 CDS DehaBAV1_1324 NC_009455.1 1288888 1290264 R PFAM: MscS Mechanosensitive ion channel; MscS mechanosensitive ion channel complement(1288888..1290264) Dehalococcoides mccartyi BAV1 5132282 YP_001214780.1 CDS DehaBAV1_1325 NC_009455.1 1290378 1291166 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(1290378..1291166) Dehalococcoides mccartyi BAV1 5132184 YP_001214781.1 CDS DehaBAV1_1326 NC_009455.1 1291304 1291588 R PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1291304..1291588) Dehalococcoides mccartyi BAV1 5132279 YP_001214782.1 CDS DehaBAV1_1327 NC_009455.1 1291647 1292222 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(1291647..1292222) Dehalococcoides mccartyi BAV1 5132243 YP_001214783.1 CDS DehaBAV1_1328 NC_009455.1 1292323 1293312 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(1292323..1293312) Dehalococcoides mccartyi BAV1 5131441 YP_001214784.1 CDS DehaBAV1_1329 NC_009455.1 1293316 1294302 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(1293316..1294302) Dehalococcoides mccartyi BAV1 5131445 YP_001214785.1 CDS DehaBAV1_1330 NC_009455.1 1294752 1295393 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; 3-Cys thioredoxin peroxidase 1294752..1295393 Dehalococcoides mccartyi BAV1 5131414 YP_001214786.1 CDS DehaBAV1_1331 NC_009455.1 1295403 1295624 D hypothetical protein 1295403..1295624 Dehalococcoides mccartyi BAV1 5131400 YP_001214787.1 CDS DehaBAV1_1332 NC_009455.1 1296008 1296217 D hypothetical protein 1296008..1296217 Dehalococcoides mccartyi BAV1 5131867 YP_001214788.1 CDS DehaBAV1_1333 NC_009455.1 1296417 1296800 D hypothetical protein 1296417..1296800 Dehalococcoides mccartyi BAV1 5131427 YP_001214789.1 CDS DehaBAV1_1334 NC_009455.1 1296842 1297408 D PFAM: LemA family protein; LemA family protein 1296842..1297408 Dehalococcoides mccartyi BAV1 5131422 YP_001214790.1 CDS DehaBAV1_1335 NC_009455.1 1297426 1298619 D PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 1297426..1298619 Dehalococcoides mccartyi BAV1 5131741 YP_001214791.1 CDS DehaBAV1_1336 NC_009455.1 1298700 1299392 R TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase complement(1298700..1299392) Dehalococcoides mccartyi BAV1 5132126 YP_001214792.1 CDS DehaBAV1_1337 NC_009455.1 1299420 1299764 R PFAM: CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(1299420..1299764) Dehalococcoides mccartyi BAV1 5131713 YP_001214793.1 CDS DehaBAV1_1338 NC_009455.1 1299770 1300678 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(1299770..1300678) Dehalococcoides mccartyi BAV1 5131707 YP_001214794.1 CDS DehaBAV1_1339 NC_009455.1 1300804 1301466 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; methyltransferase type 11 complement(1300804..1301466) Dehalococcoides mccartyi BAV1 5131538 YP_001214795.1 CDS DehaBAV1_1340 NC_009455.1 1301466 1302539 R PFAM: AIR synthase related protein domain protein; AIR synthase-like protein complement(1301466..1302539) Dehalococcoides mccartyi BAV1 5131458 YP_001214796.1 CDS DehaBAV1_1341 NC_009455.1 1302768 1303214 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator complement(1302768..1303214) Dehalococcoides mccartyi BAV1 5132197 YP_001214797.1 CDS DehaBAV1_1342 NC_009455.1 1303413 1304447 R PFAM: ApbE family lipoprotein; ApbE family lipoprotein complement(1303413..1304447) Dehalococcoides mccartyi BAV1 5132190 YP_001214798.1 CDS DehaBAV1_1343 NC_009455.1 1304530 1305723 R PFAM: FMN-binding domain protein; FMN-binding domain-containing protein complement(1304530..1305723) Dehalococcoides mccartyi BAV1 5132210 YP_001214799.1 CDS DehaBAV1_1344 NC_009455.1 1306001 1307152 R hypothetical protein complement(1306001..1307152) Dehalococcoides mccartyi BAV1 5132108 YP_001214800.1 CDS DehaBAV1_1345 NC_009455.1 1307321 1308109 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase TatC complement(1307321..1308109) Dehalococcoides mccartyi BAV1 5132052 YP_001214801.1 CDS DehaBAV1_1346 NC_009455.1 1308106 1308396 R PFAM: sec-independent translocation protein mttA/Hcf106; sec-independent translocation protein mttA/Hcf106 complement(1308106..1308396) Dehalococcoides mccartyi BAV1 5132116 YP_001214802.1 CDS DehaBAV1_1347 NC_009455.1 1308473 1308709 R PFAM: sec-independent translocation protein mttA/Hcf106; sec-independent translocation protein mttA/Hcf106 complement(1308473..1308709) Dehalococcoides mccartyi BAV1 5131218 YP_001214803.1 CDS DehaBAV1_1348 NC_009455.1 1308801 1308998 R PFAM: sec-independent translocation protein mttA/Hcf106; sec-independent translocation protein mttA/Hcf106 complement(1308801..1308998) Dehalococcoides mccartyi BAV1 5131211 YP_001214804.1 CDS DehaBAV1_1349 NC_009455.1 1309246 1310094 D TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 1309246..1310094 Dehalococcoides mccartyi BAV1 5131204 YP_001214805.1 CDS DehaBAV1_1350 NC_009455.1 1310085 1310612 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1310085..1310612 Dehalococcoides mccartyi BAV1 5131210 YP_001214806.1 CDS DehaBAV1_1351 NC_009455.1 1310612 1310983 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; putative 6-pyruvoyl tetrahydropterin synthase 1310612..1310983 Dehalococcoides mccartyi BAV1 5132081 YP_001214807.1 CDS DehaBAV1_1352 NC_009455.1 1311107 1312120 D TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 1311107..1312120 Dehalococcoides mccartyi BAV1 5132023 YP_001214808.1 CDS DehaBAV1_1353 NC_009455.1 1312208 1312852 D PFAM: regulatory protein RecX; regulatory protein RecX 1312208..1312852 Dehalococcoides mccartyi BAV1 5132157 YP_001214809.1 CDS DehaBAV1_1354 NC_009455.1 1312921 1314504 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1312921..1314504 Dehalococcoides mccartyi BAV1 5132253 YP_001214810.1 CDS DehaBAV1_1355 NC_009455.1 1314516 1315286 D PFAM: metallophosphoesterase; metallophosphoesterase 1314516..1315286 Dehalococcoides mccartyi BAV1 5132304 YP_001214811.1 CDS DehaBAV1_1356 NC_009455.1 1315289 1316152 D PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein 1315289..1316152 Dehalococcoides mccartyi BAV1 5131085 YP_001214812.1 CDS DehaBAV1_1357 NC_009455.1 1316149 1316847 D PFAM: protein of unknown function DUF205; membrane protein 1316149..1316847 Dehalococcoides mccartyi BAV1 5132262 YP_001214813.1 CDS DehaBAV1_1358 NC_009455.1 1316874 1317545 R PFAM: HhH-GPD family protein; HhH-GPD family protein complement(1316874..1317545) Dehalococcoides mccartyi BAV1 5132150 YP_001214814.1 CDS DehaBAV1_1359 NC_009455.1 1317527 1317970 R PFAM: protein of unknown function UPF0066; hypothetical protein complement(1317527..1317970) Dehalococcoides mccartyi BAV1 5131222 YP_001214815.1 CDS DehaBAV1_1360 NC_009455.1 1318024 1319271 R PFAM: pyruvate carboxyltransferase; 2-isopropylmalate synthase complement(1318024..1319271) Dehalococcoides mccartyi BAV1 5132359 YP_001214816.1 CDS DehaBAV1_1361 NC_009455.1 1319433 1319924 D PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 1319433..1319924 Dehalococcoides mccartyi BAV1 5131207 YP_001214817.1 CDS DehaBAV1_1362 NC_009455.1 1320071 1320343 D hypothetical protein 1320071..1320343 Dehalococcoides mccartyi BAV1 5131206 YP_001214818.1 CDS DehaBAV1_1363 NC_009455.1 1320340 1320654 D PFAM: protein of unknown function DUF74; hypothetical protein 1320340..1320654 Dehalococcoides mccartyi BAV1 5131217 YP_001214819.1 CDS DehaBAV1_1364 NC_009455.1 1320673 1320864 D hypothetical protein 1320673..1320864 Dehalococcoides mccartyi BAV1 5132109 YP_001214820.1 CDS DehaBAV1_1365 NC_009455.1 1320868 1321809 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1320868..1321809 Dehalococcoides mccartyi BAV1 5131220 YP_001214821.1 CDS DehaBAV1_1366 NC_009455.1 1321806 1322567 D hypothetical protein 1321806..1322567 Dehalococcoides mccartyi BAV1 5131215 YP_001214822.1 CDS DehaBAV1_1367 NC_009455.1 1322602 1323900 D TIGRFAM: cell wall/surface repeat protein; cell wall/surface repeat-containing protein 1322602..1323900 Dehalococcoides mccartyi BAV1 5132229 YP_001214823.1 CDS DehaBAV1_1368 NC_009455.1 1323995 1324438 D DNA-binding protein with PD1-like DNA-binding-like protein 1323995..1324438 Dehalococcoides mccartyi BAV1 5132036 YP_001214824.1 CDS DehaBAV1_1369 NC_009455.1 1324605 1324772 R PFAM: Desulfoferrodoxin Dfx domain protein; desulfoferrodoxin Dfx domain-containing protein complement(1324605..1324772) Dehalococcoides mccartyi BAV1 5132112 YP_001214825.1 CDS DehaBAV1_1370 NC_009455.1 1324804 1325013 R hypothetical protein complement(1324804..1325013) Dehalococcoides mccartyi BAV1 5132169 YP_001214826.1 CDS argC NC_009455.1 1325260 1326285 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(1325260..1326285) Dehalococcoides mccartyi BAV1 5131790 YP_001214827.1 CDS DehaBAV1_1372 NC_009455.1 1326341 1328044 R PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(1326341..1328044) Dehalococcoides mccartyi BAV1 5132288 YP_001214828.1 CDS DehaBAV1_1373 NC_009455.1 1328198 1328971 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 1328198..1328971 Dehalococcoides mccartyi BAV1 5131621 YP_001214829.1 CDS DehaBAV1_1374 NC_009455.1 1329026 1330858 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1329026..1330858 Dehalococcoides mccartyi BAV1 5132028 YP_001214830.1 CDS DehaBAV1_1375 NC_009455.1 1330933 1333362 R TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; DNA gyrase subunit A complement(1330933..1333362) Dehalococcoides mccartyi BAV1 5132060 YP_001214831.1 CDS DehaBAV1_1376 NC_009455.1 1333366 1334172 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(1333366..1334172) Dehalococcoides mccartyi BAV1 5131189 YP_001214832.1 CDS DehaBAV1_1377 NC_009455.1 1334385 1334603 D PFAM: nitrogen-fixing NifU domain protein; NifU domain-containing protein 1334385..1334603 Dehalococcoides mccartyi BAV1 5132419 YP_001214833.1 CDS DehaBAV1_1378 NC_009455.1 1334661 1335878 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(1334661..1335878) Dehalococcoides mccartyi BAV1 5132063 YP_001214834.1 CDS DehaBAV1_1379 NC_009455.1 1335993 1336196 R hypothetical protein complement(1335993..1336196) Dehalococcoides mccartyi BAV1 5132280 YP_001214835.1 CDS DehaBAV1_1380 NC_009455.1 1336220 1337401 R catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase complement(1336220..1337401) Dehalococcoides mccartyi BAV1 5132032 YP_001214836.1 CDS DehaBAV1_1381 NC_009455.1 1337563 1338348 R TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; MazG family protein complement(1337563..1338348) Dehalococcoides mccartyi BAV1 5131794 YP_001214837.1 CDS DehaBAV1_1382 NC_009455.1 1338468 1339166 R PFAM: peptidase, membrane zinc metallopeptidase, putative; peptidase, membrane zinc metallopeptidase, putative complement(1338468..1339166) Dehalococcoides mccartyi BAV1 5132057 YP_001214838.1 CDS rpsT NC_009455.1 1339305 1339571 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1339305..1339571 Dehalococcoides mccartyi BAV1 5132238 YP_001214839.1 CDS DehaBAV1_1384 NC_009455.1 1339672 1340316 D TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor, LexA 1339672..1340316 Dehalococcoides mccartyi BAV1 5132049 YP_001214840.1 CDS DehaBAV1_1385 NC_009455.1 1340328 1340909 D catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase 1340328..1340909 Dehalococcoides mccartyi BAV1 5132196 YP_001214841.1 CDS DehaBAV1_1386 NC_009455.1 1340906 1341853 R TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase complement(1340906..1341853) Dehalococcoides mccartyi BAV1 5132040 DehaBAV1_R0003 tRNA DehaBAV1_R0003 NC_009455.1 57444 57519 D tRNA-Ala 57444..57519 Dehalococcoides mccartyi BAV1 5131810 DehaBAV1_R0004 tRNA DehaBAV1_R0004 NC_009455.1 223784 223859 R tRNA-Val complement(223784..223859) Dehalococcoides mccartyi BAV1 5132120 DehaBAV1_R0005 tRNA DehaBAV1_R0005 NC_009455.1 312176 312251 R tRNA-Ala complement(312176..312251) Dehalococcoides mccartyi BAV1 5132344 DehaBAV1_R0007 tRNA DehaBAV1_R0007 NC_009455.1 372125 372199 D tRNA-Thr 372125..372199 Dehalococcoides mccartyi BAV1 5131468 DehaBAV1_R0008 tRNA DehaBAV1_R0008 NC_009455.1 403848 403922 R tRNA-Met complement(403848..403922) Dehalococcoides mccartyi BAV1 5131128 DehaBAV1_R0009 tRNA DehaBAV1_R0009 NC_009455.1 535171 535260 R tRNA-Ser complement(535171..535260) Dehalococcoides mccartyi BAV1 5131771 DehaBAV1_R0010 tRNA DehaBAV1_R0010 NC_009455.1 644324 644413 R tRNA-Ser complement(644324..644413) Dehalococcoides mccartyi BAV1 5131015 DehaBAV1_R0011 tRNA DehaBAV1_R0011 NC_009455.1 644450 644539 R tRNA-Ser complement(644450..644539) Dehalococcoides mccartyi BAV1 5132163 DehaBAV1_R0012 tRNA DehaBAV1_R0012 NC_009455.1 646274 646345 D tRNA-Arg 646274..646345 Dehalococcoides mccartyi BAV1 5131345 DehaBAV1_R0013 tRNA DehaBAV1_R0013 NC_009455.1 652466 652543 D tRNA-Pro 652466..652543 Dehalococcoides mccartyi BAV1 5132188 DehaBAV1_R0014 tRNA DehaBAV1_R0014 NC_009455.1 654991 655065 R tRNA-Gly complement(654991..655065) Dehalococcoides mccartyi BAV1 5131077 DehaBAV1_R0015 tRNA DehaBAV1_R0015 NC_009455.1 655617 655691 D tRNA-Met 655617..655691 Dehalococcoides mccartyi BAV1 5131081 DehaBAV1_R0016 tRNA DehaBAV1_R0016 NC_009455.1 667738 667814 D tRNA-Arg 667738..667814 Dehalococcoides mccartyi BAV1 5132415 DehaBAV1_R0017 tRNA DehaBAV1_R0017 NC_009455.1 677376 677460 R tRNA-Leu complement(677376..677460) Dehalococcoides mccartyi BAV1 5131823 DehaBAV1_R0018 tRNA DehaBAV1_R0018 NC_009455.1 679908 679984 D tRNA-Pro 679908..679984 Dehalococcoides mccartyi BAV1 5132318 DehaBAV1_R0019 tRNA DehaBAV1_R0019 NC_009455.1 719505 719580 D tRNA-Phe 719505..719580 Dehalococcoides mccartyi BAV1 5132370 DehaBAV1_R0020 tRNA DehaBAV1_R0020 NC_009455.1 719655 719741 D tRNA-Leu 719655..719741 Dehalococcoides mccartyi BAV1 5132269 DehaBAV1_R0021 tRNA DehaBAV1_R0021 NC_009455.1 719772 719845 D tRNA-Gln 719772..719845 Dehalococcoides mccartyi BAV1 5132246 DehaBAV1_R0022 tRNA DehaBAV1_R0022 NC_009455.1 719856 719930 D tRNA-Asn 719856..719930 Dehalococcoides mccartyi BAV1 5132225 DehaBAV1_R0023 tRNA DehaBAV1_R0023 NC_009455.1 726826 726898 R tRNA-Lys complement(726826..726898) Dehalococcoides mccartyi BAV1 5131230 DehaBAV1_R0024 tRNA DehaBAV1_R0024 NC_009455.1 760830 760904 D tRNA-Gly 760830..760904 Dehalococcoides mccartyi BAV1 5131985 DehaBAV1_R0025 tRNA DehaBAV1_R0025 NC_009455.1 782120 782195 R tRNA-Lys complement(782120..782195) Dehalococcoides mccartyi BAV1 5132206 DehaBAV1_R0026 tRNA DehaBAV1_R0026 NC_009455.1 839073 839148 R tRNA-Arg complement(839073..839148) Dehalococcoides mccartyi BAV1 5131369 DehaBAV1_R0027 tRNA DehaBAV1_R0027 NC_009455.1 839164 839239 R tRNA-His complement(839164..839239) Dehalococcoides mccartyi BAV1 5132290 DehaBAV1_R0028 tRNA DehaBAV1_R0028 NC_009455.1 874886 874961 R tRNA-Thr complement(874886..874961) Dehalococcoides mccartyi BAV1 5131366 DehaBAV1_R0029 tRNA DehaBAV1_R0029 NC_009455.1 875024 875107 R tRNA-Tyr complement(875024..875107) Dehalococcoides mccartyi BAV1 5132345 DehaBAV1_R0030 tRNA DehaBAV1_R0030 NC_009455.1 875147 875219 R tRNA-Thr complement(875147..875219) Dehalococcoides mccartyi BAV1 5132356 DehaBAV1_R0031 tRNA DehaBAV1_R0031 NC_009455.1 891868 891944 R tRNA-Ile complement(891868..891944) Dehalococcoides mccartyi BAV1 5131433 DehaBAV1_R0033 tRNA DehaBAV1_R0033 NC_009455.1 895133 895209 R tRNA-Glu complement(895133..895209) Dehalococcoides mccartyi BAV1 5131368 DehaBAV1_R0034 tRNA DehaBAV1_R0034 NC_009455.1 895222 895295 R tRNA-Gln complement(895222..895295) Dehalococcoides mccartyi BAV1 5132224 DehaBAV1_R0035 tRNA DehaBAV1_R0035 NC_009455.1 914980 915056 D tRNA-Asp 914980..915056 Dehalococcoides mccartyi BAV1 5131651 DehaBAV1_R0036 tRNA DehaBAV1_R0036 NC_009455.1 985134 985210 R tRNA-Val complement(985134..985210) Dehalococcoides mccartyi BAV1 5131038 DehaBAV1_R0037 tRNA DehaBAV1_R0037 NC_009455.1 1112963 1113037 D tRNA-Met 1112963..1113037 Dehalococcoides mccartyi BAV1 5131802 DehaBAV1_R0038 tRNA DehaBAV1_R0038 NC_009455.1 1171930 1172021 R tRNA-Ser complement(1171930..1172021) Dehalococcoides mccartyi BAV1 5131528 DehaBAV1_R0039 tRNA DehaBAV1_R0039 NC_009455.1 1226125 1226201 D tRNA-Trp 1226125..1226201 Dehalococcoides mccartyi BAV1 5131601 DehaBAV1_R0040 tRNA DehaBAV1_R0040 NC_009455.1 1226207 1226293 D tRNA-Leu 1226207..1226293 Dehalococcoides mccartyi BAV1 5131941 DehaBAV1_R0041 tRNA DehaBAV1_R0041 NC_009455.1 1226307 1226381 D tRNA-Gly 1226307..1226381 Dehalococcoides mccartyi BAV1 5131931 DehaBAV1_R0042 tRNA DehaBAV1_R0042 NC_009455.1 1226419 1226493 D tRNA-Cys 1226419..1226493 Dehalococcoides mccartyi BAV1 5131932 DehaBAV1_R0043 tRNA DehaBAV1_R0043 NC_009455.1 1227433 1227517 D tRNA-Leu 1227433..1227517 Dehalococcoides mccartyi BAV1 5131602 DehaBAV1_R0044 tRNA DehaBAV1_R0044 NC_009455.1 1243299 1243385 D tRNA-Leu 1243299..1243385 Dehalococcoides mccartyi BAV1 5131549 DehaBAV1_R0045 tRNA DehaBAV1_R0045 NC_009455.1 1243391 1243468 D tRNA-Arg 1243391..1243468 Dehalococcoides mccartyi BAV1 5131777 DehaBAV1_R0046 tRNA DehaBAV1_R0046 NC_009455.1 1243479 1243555 D tRNA-Val 1243479..1243555 Dehalococcoides mccartyi BAV1 5131888 DehaBAV1_R0048 tRNA DehaBAV1_R0048 NC_009455.1 1276021 1276093 D tRNA-Ala 1276021..1276093 Dehalococcoides mccartyi BAV1 5132257 DehaBAV1_R0049 tRNA DehaBAV1_R0049 NC_009455.1 1295758 1295834 D tRNA-Arg 1295758..1295834 Dehalococcoides mccartyi BAV1 5131413 DehaBAV1_R0050 tRNA DehaBAV1_R0050 NC_009455.1 1325135 1325210 R tRNA-Glu complement(1325135..1325210) Dehalococcoides mccartyi BAV1 5131213 DehaBAV1_R0051 tRNA DehaBAV1_R0051 NC_009455.1 1337474 1337551 D tRNA-Pro 1337474..1337551 Dehalococcoides mccartyi BAV1 5132034 DehaBAV1_R0001 rRNA DehaBAV1_R0001 NC_009455.1 47151 50104 D 23S ribosomal RNA 47151..50104 Dehalococcoides mccartyi BAV1 5131798 DehaBAV1_R0002 rRNA DehaBAV1_R0002 NC_009455.1 50199 50321 D 5S ribosomal RNA 50199..50321 Dehalococcoides mccartyi BAV1 5132014 DehaBAV1_R0032 rRNA DehaBAV1_R0032 NC_009455.1 892247 893755 R 16S ribosomal RNA complement(892247..893755) Dehalococcoides mccartyi BAV1 5132236