-- dump date 20140619_055550 -- class Genbank::CDS -- table cds_note -- id note YP_005026267.1 PFAM: Aminotransferase class IV; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; manually curated YP_005026268.1 PFAM: SirA-like protein YP_005026269.1 PFAM: Peptidase family M48 YP_005026270.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_005026272.1 PFAM: Sulphur oxidation protein SoxZ YP_005026273.1 PFAM: 'Cold-shock' DNA-binding domain YP_005026274.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_005026275.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA YP_005026276.1 PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy YP_005026277.1 PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase YP_005026278.1 PFAM: EamA-like transporter family YP_005026279.1 PFAM: Thioredoxin YP_005026280.1 PFAM: UPF0126 domain YP_005026281.1 PFAM: CBS domain YP_005026282.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005026283.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II YP_005026284.1 PFAM: Sulfite exporter TauE/SafE YP_005026285.1 PFAM: Malate synthase; TIGRFAM: malate synthase A YP_005026286.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01458 YP_005026287.1 PFAM: Protein of unknown function (DUF2789) YP_005026289.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_005026290.1 PFAM: Cytochrome C' YP_005026292.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_005026293.1 PFAM: LrgA family YP_005026294.1 PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein YP_005026295.1 PFAM: MazG nucleotide pyrophosphohydrolase domain YP_005026296.1 PFAM: Uncharacterised protein family UPF0005 YP_005026297.1 PFAM: Small Multidrug Resistance protein YP_005026298.1 PFAM: Sir2 family YP_005026299.1 PFAM: Peptidase family M48 YP_005026300.1 PFAM: Flagellar hook-associated protein 2 C-terminus YP_005026301.1 PFAM: Ankyrin repeat YP_005026302.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_005026303.1 PFAM: CoA-transferase family III YP_005026304.1 PFAM: HIT domain YP_005026305.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_005026306.1 PFAM: FAD dependent oxidoreductase YP_005026308.1 PFAM: Protein of unknown function (DUF2892) YP_005026309.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_005026310.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_005026312.1 PFAM: Peptidase family M3 YP_005026313.1 PFAM: Predicted integral membrane protein (DUF2189) YP_005026314.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_005026315.1 PFAM: Protein of unknown function (DUF3422) YP_005026316.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype YP_005026317.1 PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase YP_005026318.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_005026320.1 PFAM: Bacterial sugar transferase YP_005026321.1 PFAM: Glycosyl transferases group 1 YP_005026322.1 PFAM: Glycosyl transferase family 2 YP_005026323.1 PFAM: Glycosyl transferases group 1 YP_005026324.1 PFAM: Glycosyl transferase family 11 YP_005026325.1 PFAM: Glycosyl transferase family 2 YP_005026326.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase YP_005026327.1 PFAM: Glycosyl transferases group 1 YP_005026328.1 manually curated YP_005026331.1 PFAM: Glycosyl transferase family 2 YP_005026332.1 PFAM: Cephalosporin hydroxylase; manually curated YP_005026333.1 PFAM: C-methyltransferase; Methyltransferase domain; manually curated YP_005026334.1 PFAM: NAD dependent epimerase/dehydratase family YP_005026335.1 PFAM: C-methyltransferase; Hypothetical methyltransferase YP_005026336.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_005026337.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase YP_005026338.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase YP_005026342.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_005026343.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_005026344.1 PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase YP_005026345.1 TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG YP_005026346.1 PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase YP_005026347.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase YP_005026348.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase YP_005026349.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_005026350.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase YP_005026351.1 PFAM: NAD dependent epimerase/dehydratase family; manually curated YP_005026352.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_005026353.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005026354.1 PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_005026355.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_005026356.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_005026357.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_005026358.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit YP_005026359.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_005026360.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005026361.1 PFAM: Protein of unknown function, DUF YP_005026362.1 PFAM: Uncharacterized protein family UPF0057 YP_005026363.1 PFAM: Putative phospholipid-binding domain YP_005026364.1 PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase YP_005026365.1 PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_005026366.1 PFAM: Transcription elongation factor, GreA/GreB, C-term YP_005026367.1 PFAM: Bacterial regulatory proteins, tetR family YP_005026368.1 PFAM: HPP family YP_005026369.1 PFAM: Aldehyde dehydrogenase family YP_005026370.1 PFAM: Protein of unknown function (DUF455) YP_005026371.1 PFAM: Peptidase family M48; PDZ domain (Also known as DHR or GLGF) YP_005026373.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_005026374.1 PFAM: Histidine kinase YP_005026375.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_005026376.1 PFAM: Protein kinase domain; Cyclic nucleotide-binding domain YP_005026378.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_005026380.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_005026381.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005026382.1 PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family YP_005026383.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_005026384.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_005026385.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_005026386.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_005026387.1 PFAM: Uncharacterised ACR, YkgG family COG1556 YP_005026388.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005026389.1 PFAM: Aldehyde dehydrogenase family YP_005026390.1 PFAM: Domain of unknown function (DUF3390); Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein YP_005026391.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_005026392.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_005026393.1 PFAM: Patatin-like phospholipase YP_005026394.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain YP_005026395.1 PFAM: Phosphoenolpyruvate carboxykinase YP_005026396.1 PFAM: Aminotransferase class I and II YP_005026398.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_005026399.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005026400.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005026402.1 PFAM: Phage integrase family YP_005026405.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_005026406.1 PFAM: Ethylbenzene dehydrogenase YP_005026407.1 PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; manually curated YP_005026408.1 PFAM: Chlorite dismutase YP_005026409.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: DMSO reductase family type II enzyme chaperone YP_005026411.1 TIGRFAM: DMSO reductase family type II enzyme, iron-sulfur subunit YP_005026412.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: DMSO reductase family type II enzyme, molybdopterin subunit; manually curated YP_005026413.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005026414.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005026415.1 PFAM: PAS fold; TIGRFAM: PAS domain S-box YP_005026416.1 PFAM: Cupin domain; manually curated YP_005026417.1 PFAM: Protein of unknown function (DUF1109) YP_005026418.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005026419.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_005026420.1 PFAM: Oxidoreductase molybdopterin binding domain YP_005026421.1 TIGRFAM: pentapeptide MXKDX repeat protein YP_005026423.1 PFAM: Polyprenyl synthetase YP_005026424.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_005026425.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_005026426.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA YP_005026427.1 PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase YP_005026428.1 PFAM: Gram-negative porin YP_005026429.1 PFAM: Indole-3-glycerol phosphate synthase YP_005026430.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_005026431.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_005026432.1 PFAM: Prophage CP4-57 regulatory protein (AlpA) YP_005026434.1 PFAM: C-5 cytosine-specific DNA methylase YP_005026437.1 PFAM: Ribosome modulation factor YP_005026444.1 PFAM: Helix-turn-helix; Peptidase S24-like YP_005026445.1 PFAM: Helix-turn-helix YP_005026447.1 PFAM: DNA methylase YP_005026448.1 PFAM: Protein of unknown function (DUF1376) YP_005026450.1 PFAM: Endodeoxyribonuclease RusA YP_005026454.1 PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain YP_005026455.1 PFAM: Phage portal protein; Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_005026456.1 PFAM: Caudovirus prohead protease YP_005026459.1 PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family YP_005026460.1 PFAM: Bacteriophage protein of unknown function (DUF646) YP_005026464.1 manually curated; non-canonical start codon YP_005026466.1 PFAM: Conserved hypothetical protein 2217 (DUF2460); TIGRFAM: TIGR02217 family protein YP_005026467.1 PFAM: Phage conserved hypothetical protein BR0599; Uncharacterized conserved protein (DUF2163); TIGRFAM: phage conserved hypothetical protein BR0599 YP_005026468.1 TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family YP_005026475.1 TIGRFAM: TIGR02594 family protein YP_005026479.1 PFAM: Phage integrase family YP_005026480.1 PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_005026481.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_005026482.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_005026483.1 PFAM: Protein of unknown function (DUF525) YP_005026484.1 PFAM: Methyltransferase domain YP_005026485.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005026487.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_005026488.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_005026489.1 PFAM: Peptidase family M23 YP_005026490.1 PFAM: Protein of unknown function (DUF721) YP_005026492.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_005026493.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_005026494.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_005026495.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_005026496.1 PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_005026497.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_005026498.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_005026499.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_005026500.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_005026501.1 PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_005026502.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_005026503.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_005026504.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_005026505.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL YP_005026506.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_005026507.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_005026508.1 PFAM: Protein of unknown function (DUF3025) YP_005026510.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type YP_005026511.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_005026512.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein YP_005026513.1 PFAM: HIRAN domain YP_005026514.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_005026516.1 PFAM: Glutathione peroxidase YP_005026517.1 PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein YP_005026518.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: sulfate ABC transporter, ATP-binding protein YP_005026519.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein YP_005026520.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT YP_005026521.1 TIGRFAM: sulfate/thiosulfate-binding protein YP_005026522.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005026523.1 PFAM: Cytochrome c; Di-haem cytochrome c peroxidase YP_005026524.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor kinase N-terminal YP_005026525.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005026526.1 PFAM: HlyD family secretion protein YP_005026527.1 PFAM: ABC transporter; ABC-2 type transporter YP_005026528.1 PFAM: ABC-2 type transporter YP_005026529.1 PFAM: Domain of unknown function (DUF1956); Bacterial regulatory proteins, tetR family YP_005026530.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005026531.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Universal stress protein family; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel His kinase sensor domain YP_005026534.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial YP_005026536.1 PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit YP_005026537.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit YP_005026538.1 PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA YP_005026539.1 PFAM: F subunit of K+-transporting ATPase (Potass_KdpF); TIGRFAM: K+-transporting ATPase, KdpF subunit YP_005026541.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_005026542.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_005026543.1 PFAM: Chaperonin 10 Kd subunit YP_005026544.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_005026545.1 PFAM: Protein of unknown function (DUF3423) YP_005026546.1 PFAM: OmpA family YP_005026548.1 PFAM: Protein of unknown function, DUF485 YP_005026549.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_005026550.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein YP_005026551.1 PFAM: EAL domain; HDOD domain YP_005026552.1 PFAM: PilZ domain YP_005026553.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_005026556.1 PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein YP_005026557.1 PFAM: Ion transport protein YP_005026558.1 PFAM: Acetyltransferase (GNAT) family YP_005026559.1 PFAM: Response regulator receiver domain; Tetratricopeptide repeat YP_005026560.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005026561.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases YP_005026562.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial YP_005026564.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005026565.1 PFAM: Sulfite exporter TauE/SafE YP_005026566.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005026567.1 PFAM: Major Facilitator Superfamily YP_005026568.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_005026569.1 PFAM: Thioesterase superfamily YP_005026570.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_005026571.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_005026572.1 PFAM: Bacterial transcriptional activator domain YP_005026573.1 PFAM: Sporulation related domain YP_005026574.1 PFAM: Protein of unknown function (DUF2802) YP_005026576.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_005026577.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_005026578.1 PFAM: AMP-binding enzyme YP_005026579.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005026580.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_005026581.1 PFAM: Thioesterase superfamily YP_005026582.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_005026583.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_005026584.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_005026585.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain YP_005026586.1 PFAM: Bacterial regulatory proteins, tetR family YP_005026587.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_005026588.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CHASE domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005026589.1 PFAM: Response regulator receiver domain YP_005026590.1 PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box YP_005026591.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_005026592.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_005026593.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_005026594.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_005026595.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_005026596.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_005026597.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_005026598.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_005026599.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_005026600.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_005026601.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_005026602.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_005026603.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_005026604.1 PFAM: Ribosomal protein S8 YP_005026605.1 PFAM: Ribosomal protein S14p/S29e YP_005026606.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_005026607.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_005026608.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_005026609.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_005026610.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_005026611.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_005026612.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_005026613.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_005026614.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_005026615.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_005026616.1 PFAM: Ribosomal protein L23 YP_005026617.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_005026618.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_005026619.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_005026620.1 PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_005026621.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_005026622.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_005026623.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_005026624.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_005026625.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_005026626.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_005026627.1 PFAM: Ribosomal protein L10 YP_005026628.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_005026629.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_005026630.1 PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG YP_005026631.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_005026632.1 PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_005026633.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_005026634.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_005026636.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated YP_005026637.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005026639.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase YP_005026641.1 PFAM: AhpC/TSA family YP_005026642.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_005026643.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_005026644.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_005026645.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_005026646.1 PFAM: Protein of unknown function (DUF3426); TIGRFAM: MJ0042 family finger-like domain YP_005026647.1 PFAM: Prokaryotic diacylglycerol kinase YP_005026648.1 PFAM: Glycosyl transferases group 1 YP_005026649.1 PFAM: pfkB family carbohydrate kinase YP_005026650.1 PFAM: Rickettsia 17 kDa surface antigen YP_005026652.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_005026653.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_005026654.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_005026655.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Polysaccharide biosynthesis protein YP_005026656.1 PFAM: NAD dependent epimerase/dehydratase family YP_005026657.1 PFAM: Glycosyl transferase family 2 YP_005026658.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I YP_005026659.1 PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_005026660.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_005026661.1 PFAM: Rhodanese-like domain YP_005026662.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_005026663.1 PFAM: AcrB/AcrD/AcrF family YP_005026664.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005026665.1 PFAM: Bacterial regulatory proteins, tetR family YP_005026666.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_005026667.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005026668.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005026669.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005026670.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005026671.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005026672.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_005026673.1 PFAM: Sodium Bile acid symporter family YP_005026675.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_005026676.1 PFAM: Eukaryotic-type carbonic anhydrase YP_005026677.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_005026678.1 PFAM: Domain of unknown function DUF20 YP_005026679.1 PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain YP_005026680.1 PFAM: Uncharacterised protein family (UPF0153) YP_005026681.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005026682.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_005026683.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005026684.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_005026685.1 PFAM: Receptor family ligand binding region YP_005026686.1 PFAM: EamA-like transporter family YP_005026688.1 PFAM: Peptidase family U32 YP_005026689.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_005026690.1 PFAM: Sel1 repeat YP_005026691.1 PFAM: Dienelactone hydrolase family YP_005026692.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_005026693.1 PFAM: NlpC/P60 family YP_005026694.1 PFAM: 2-nitropropane dioxygenase YP_005026695.1 PFAM: HDOD domain YP_005026696.1 PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE) YP_005026697.1 PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase YP_005026698.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_005026699.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_005026700.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_005026701.1 PFAM: RNB domain YP_005026702.1 PFAM: Uncharacterised protein family (UPF0227) YP_005026704.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_005026705.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_005026706.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_005026707.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_005026708.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_005026711.1 PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type YP_005026712.1 PFAM: Protein of unknown function (DUF2782) YP_005026713.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein YP_005026714.1 PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_005026715.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_005026716.1 PFAM: Glycosyl transferases group 1 YP_005026717.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_005026720.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_005026721.1 PFAM: Glycosyl transferases group 1 YP_005026722.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: lipid A export permease/ATP-binding protein MsbA YP_005026723.1 PFAM: Glycosyl transferases group 1 YP_005026724.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, putative YP_005026725.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase YP_005026726.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_005026727.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_005026728.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_005026729.1 PFAM: Universal stress protein family YP_005026730.1 PFAM: PilZ domain YP_005026731.1 PFAM: Radical SAM superfamily YP_005026732.1 TIGRFAM: tol-pal system protein YbgF YP_005026733.1 PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein YP_005026734.1 PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB YP_005026735.1 TIGRFAM: TolA protein YP_005026736.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein YP_005026737.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein YP_005026738.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase YP_005026739.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_005026740.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_005026741.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_005026742.1 PFAM: Hemerythrin HHE cation binding domain YP_005026743.1 PFAM: EamA-like transporter family YP_005026744.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_005026745.1 PFAM: Bacterial protein of unknown function (DUF853) YP_005026746.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_005026747.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_005026749.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_005026750.1 PFAM: Protein phosphatase 2C YP_005026751.1 PFAM: Protein kinase domain YP_005026752.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_005026753.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_005026754.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_005026755.1 PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_005026756.1 PFAM: FAD dependent oxidoreductase YP_005026757.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_005026758.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_005026759.1 PFAM: Bestrophin YP_005026760.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase YP_005026761.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005026762.1 PFAM: NapD protein YP_005026763.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: periplasmic nitrate reductase, large subunit; Tat (twin-arginine translocation) pathway signal sequence YP_005026764.1 TIGRFAM: MauM/NapG family ferredoxin-type protein YP_005026765.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family YP_005026766.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB) YP_005026768.1 PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM extracellular 2; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005026771.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_005026772.1 PFAM: Carboxyl transferase domain YP_005026773.1 PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase YP_005026774.1 PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain YP_005026775.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005026776.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_005026777.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_005026778.1 PFAM: Protein of unknown function, DUF485 YP_005026779.1 PFAM: Sulfite exporter TauE/SafE YP_005026780.1 PFAM: Protein of unknown function DUF55 YP_005026781.1 PFAM: Cell division protein ZapA YP_005026782.1 TIGRFAM: TIGR02449 family protein YP_005026783.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_005026784.1 PFAM: FecCD transport family YP_005026785.1 PFAM: ABC transporter YP_005026786.1 PFAM: Cob(I)alamin adenosyltransferase N terminal; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_005026787.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase YP_005026790.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: hemerythrin-like metal-binding domain YP_005026791.1 PFAM: Flavin reductase like domain YP_005026793.1 PFAM: Periplasmic binding protein YP_005026794.1 PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase YP_005026795.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD YP_005026796.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ YP_005026797.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase YP_005026798.1 PFAM: Flagellar basal body-associated protein FliL YP_005026799.1 PFAM: YeeE/YedE family (DUF395) YP_005026800.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC YP_005026801.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE YP_005026802.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN YP_005026803.1 PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX YP_005026804.1 PFAM: Protein of unknown function, DUF269; TIGRFAM: probable nitrogen fixation protein YP_005026805.1 PFAM: Protein of unknown function (DUF683) YP_005026807.1 TIGRFAM: ferredoxin III, nif-specific YP_005026808.1 PFAM: NifQ YP_005026809.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); Tetratricopeptide repeat YP_005026810.1 PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA YP_005026811.1 PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain YP_005026812.1 PFAM: TOBE domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; molybdenum-pterin binding domain YP_005026813.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_005026814.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein YP_005026815.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; molybdenum ABC transporter, ATP-binding protein YP_005026816.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_005026817.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: putative molybdenum utilization protein ModD YP_005026818.1 PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain YP_005026819.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005026822.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_005026823.1 PFAM: Rubrerythrin YP_005026825.1 PFAM: FAD binding domain YP_005026826.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_005026827.1 PFAM: Electron transfer flavoprotein domain YP_005026828.1 PFAM: Nitrogen fixation protein NifW YP_005026829.1 PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV YP_005026830.1 PFAM: Membrane transport protein YP_005026831.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_005026832.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_005026833.1 PFAM: STAS domain YP_005026834.1 PFAM: ABC 3 transport family YP_005026835.1 PFAM: ABC transporter YP_005026836.1 PFAM: Periplasmic solute binding protein family YP_005026839.1 PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain YP_005026840.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain YP_005026841.1 PFAM: Ferric uptake regulator family YP_005026842.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase YP_005026843.1 PFAM: Protein of unknown function (DUF342) YP_005026844.1 PFAM: Uncharacterized ACR, COG1678 YP_005026845.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_005026846.1 PFAM: Phosphoribosyl transferase domain YP_005026847.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_005026848.1 TIGRFAM: dihydroorotase, multifunctional complex type YP_005026850.1 PFAM: LytTr DNA-binding domain; PAS fold YP_005026851.1 PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: TIGR00251 family protein YP_005026852.1 PFAM: YGGT family YP_005026853.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_005026854.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_005026855.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_005026856.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_005026857.1 PFAM: Putative RNA methylase family UPF0020; THUMP domain YP_005026858.1 PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein YP_005026859.1 PFAM: NAD dependent epimerase/dehydratase family YP_005026860.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_005026861.1 PFAM: HDOD domain YP_005026862.1 PFAM: Phosphotransferase system, EIIC; EAL domain; TIGRFAM: PTS system, lactose/cellobiose family IIC component YP_005026864.1 PFAM: SCO1/SenC YP_005026866.1 PFAM: Predicted permease YP_005026867.1 PFAM: ABC transporter YP_005026869.1 PFAM: NosL YP_005026870.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_005026871.1 PFAM: FecR protein YP_005026872.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005026873.1 PFAM: NosL YP_005026874.1 PFAM: NosL YP_005026876.1 PFAM: Domain of unknown function DUF59 YP_005026877.1 PFAM: ABC transporter YP_005026878.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005026879.1 PFAM: Branched-chain amino acid transport system / permease component YP_005026880.1 PFAM: Branched-chain amino acid transport system / permease component YP_005026881.1 PFAM: Receptor family ligand binding region YP_005026882.1 PFAM: Cytochrome c YP_005026883.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); Protein of unknown function, DUF255 YP_005026884.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005026885.1 PFAM: EamA-like transporter family YP_005026886.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005026887.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005026888.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005026889.1 PFAM: ABC transporter YP_005026890.1 PFAM: Protein of unknown function (DUF465) YP_005026891.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form YP_005026892.1 PFAM: S4 domain YP_005026893.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_005026894.1 PFAM: Domain of unknown function (DUF3391); HD domain YP_005026895.1 PFAM: AMP-binding enzyme YP_005026896.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase YP_005026897.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_005026898.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_005026899.1 PFAM: Acetyltransferase (GNAT) family YP_005026900.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_005026901.1 PFAM: Protein of unknown function, DUF484 YP_005026902.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC YP_005026903.1 PFAM: VIT family YP_005026904.1 PFAM: S-adenosylmethionine-dependent methyltransferase YP_005026906.1 PFAM: Predicted membrane protein (DUF2238) YP_005026907.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Hpt domain YP_005026908.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005026909.1 PFAM: CheW-like domain YP_005026910.1 PFAM: Response regulator receiver domain YP_005026911.1 PFAM: Response regulator receiver domain YP_005026912.1 PFAM: Rubredoxin; manually curated YP_005026913.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_005026914.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_005026915.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_005026916.1 PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family YP_005026917.1 PFAM: Sodium:solute symporter family YP_005026919.1 PFAM: Predicted membrane protein (DUF2339) YP_005026921.1 PFAM: Arginase family; TIGRFAM: arginase YP_005026922.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase YP_005026923.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_005026924.1 PFAM: Sporulation related domain YP_005026925.1 PFAM: DSBA-like thioredoxin domain YP_005026926.1 PFAM: short chain dehydrogenase YP_005026929.1 PFAM: SCO1/SenC YP_005026930.1 PFAM: short chain dehydrogenase YP_005026931.1 PFAM: Periplasmic binding protein YP_005026932.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_005026933.1 PFAM: Transglycosylase SLT domain YP_005026934.1 PFAM: NAD dependent epimerase/dehydratase family YP_005026935.1 PFAM: Glutathione S-transferase, N-terminal domain YP_005026936.1 PFAM: HD domain; Poly A polymerase head domain YP_005026937.1 PFAM: Protein of unknown function (DUF2905) YP_005026938.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_005026939.1 PFAM: alpha/beta hydrolase fold YP_005026943.1 PFAM: Uncharacterized ACR, COG1565 YP_005026944.1 PFAM: short chain dehydrogenase YP_005026945.1 PFAM: PP-loop family YP_005026946.1 PFAM: Adenylate and Guanylate cyclase catalytic domain; FHA domain YP_005026947.1 PFAM: Protein kinase domain YP_005026950.1 PFAM: psiF repeat YP_005026951.1 PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase YP_005026952.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN YP_005026953.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_005026954.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_005026955.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005026956.1 PFAM: RecX family YP_005026957.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_005026958.1 PFAM: MASE1; PAS fold; TIGRFAM: PAS domain S-box YP_005026959.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_005026960.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_005026961.1 PFAM: Phosphatidylglycerophosphatase A YP_005026962.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_005026963.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_005026964.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_005026965.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005026966.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_005026967.1 PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II YP_005026968.1 PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region YP_005026969.1 PFAM: CutA1 divalent ion tolerance protein YP_005026970.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family YP_005026971.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain YP_005026973.1 PFAM: CheW-like domain YP_005026974.1 PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI YP_005026976.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_005026977.1 PFAM: VanZ like family YP_005026978.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form YP_005026979.1 PFAM: Autotransporter beta-domain; Putative Ig domain YP_005026980.1 PFAM: Phage Tail Collar Domain YP_005026981.1 PFAM: Phage Tail Collar Domain YP_005026982.1 PFAM: Phage Tail Collar Domain; manually curated YP_005026984.1 PFAM: Acetyltransferase (GNAT) family YP_005026986.1 PFAM: Cysteine-rich domain; FAD binding domain; Protein of unknown function (DUF3683); Domain of unknown function (DUF3400); FAD linked oxidases, C-terminal domain YP_005026988.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme YP_005026989.1 PFAM: Major Facilitator Superfamily YP_005026990.1 PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW YP_005026991.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_005026992.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_005026993.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_005026994.1 PFAM: PTS system fructose IIA component YP_005026995.1 PFAM: ApbE family YP_005026996.1 PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic YP_005026997.1 PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase, T. ferrooxidans family YP_005026998.1 PFAM: NMT1/THI5 like YP_005026999.1 PFAM: EAL domain; HAMP domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027001.1 PFAM: Eco57I restriction endonuclease YP_005027003.1 PFAM: ABC transporter YP_005027007.1 PFAM: Domain of unknown function (DUF3391); HD domain YP_005027008.1 PFAM: ABC transporter YP_005027009.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005027010.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005027011.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein YP_005027012.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_005027013.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_005027014.1 PFAM: Nitrogen regulatory protein P-II YP_005027015.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial YP_005027016.1 PFAM: Protein of unknown function (DUF526) YP_005027017.1 PFAM: Staphylococcal nuclease homologue; manually curated YP_005027020.1 PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase; manually curated YP_005027021.1 PFAM: Restriction endonuclease YP_005027022.1 PFAM: Resolvase, N terminal domain YP_005027023.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_005027024.1 PFAM: HAMP domain; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box YP_005027025.1 PFAM: HD domain; Response regulator receiver domain YP_005027026.1 PFAM: SmpA / OmlA family YP_005027027.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase YP_005027028.1 PFAM: short chain dehydrogenase; TIGRFAM: acetoacetyl-CoA reductase YP_005027029.1 PFAM: Ferric reductase like transmembrane component; FAD-binding domain YP_005027030.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form YP_005027031.1 PFAM: Acetyltransferase (GNAT) family; manually curated YP_005027032.1 PFAM: Protein of unknown function (DUF1343) YP_005027034.1 PFAM: Radical SAM superfamily YP_005027035.1 PFAM: Bacterial Transmembrane Pair family YP_005027036.1 PFAM: 2-phosphosulpholactate phosphatase YP_005027037.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005027038.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_005027041.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_005027042.1 PFAM: M61 glycyl aminopeptidase YP_005027043.1 PFAM: Protein of unknown function (DUF861) YP_005027045.1 PFAM: Domain of unknown function (DUF1840) YP_005027046.1 PFAM: Carbonic anhydrase YP_005027047.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases YP_005027048.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2059) YP_005027049.1 PFAM: ROK family YP_005027050.1 PFAM: MOSC domain YP_005027051.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027053.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_005027054.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_005027055.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_005027056.1 PFAM: TrkA-N domain; TrkA-C domain YP_005027057.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family YP_005027058.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005027060.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_005027061.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_005027062.1 PFAM: S1/P1 Nuclease YP_005027063.1 PFAM: Peptidase family M48 YP_005027064.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_005027065.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_005027066.1 PFAM: LysM domain YP_005027067.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_005027068.1 PFAM: Protein of unknown function (DUF494) YP_005027069.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_005027070.1 PFAM: Ferritin-like domain YP_005027071.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005027072.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase YP_005027074.1 PFAM: Redoxin YP_005027075.1 PFAM: Acyltransferase family YP_005027076.1 PFAM: Protein of unknown function DUF262; Protein of unknown function (DUF1524) YP_005027077.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_005027078.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_005027079.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; manually curated YP_005027080.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type YP_005027081.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_005027082.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_005027083.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_005027084.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain YP_005027086.1 PFAM: Receptor family ligand binding region YP_005027087.1 PFAM: Receptor family ligand binding region YP_005027088.1 PFAM: ABC transporter YP_005027089.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Branched-chain amino acid transport system / permease component YP_005027090.1 PFAM: Branched-chain amino acid transport system / permease component YP_005027091.1 PFAM: Receptor family ligand binding region YP_005027092.1 PFAM: Response regulator receiver domain YP_005027093.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_005027094.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_005027095.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005027096.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_005027098.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_005027099.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_005027100.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_005027101.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_005027102.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_005027103.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_005027104.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit YP_005027105.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_005027107.1 PFAM: Tim44-like domain YP_005027108.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_005027109.1 PFAM: Protein of unknown function (DUF971) YP_005027110.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_005027111.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); TIGRFAM: phosphate regulon sensor kinase PhoR YP_005027114.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_005027117.1 PFAM: Protein of unknown function (DUF1469) YP_005027118.1 PFAM: Bacterial protein of unknown function (DUF883) YP_005027119.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_005027120.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_005027122.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_005027123.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_005027124.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG YP_005027125.1 PFAM: Cytochrome c oxidase subunit III YP_005027127.1 PFAM: Bacterial regulatory protein, Fis family YP_005027128.1 PFAM: Cyclic nucleotide-binding domain YP_005027129.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain YP_005027130.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_005027131.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_005027133.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_005027134.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_005027135.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_005027136.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_005027137.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_005027138.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_005027139.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_005027140.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A YP_005027141.1 PFAM: EAL domain; GGDEF domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027142.1 PFAM: Nitrogen regulatory protein P-II YP_005027143.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_005027144.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_005027145.1 PFAM: Outer membrane efflux protein YP_005027146.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_005027147.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase YP_005027148.1 PFAM: Protein of unknown function (DUF493) YP_005027149.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_005027150.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase YP_005027153.1 PFAM: Domain of unknown function DUF87; Bacterial protein of unknown function (DUF853) YP_005027156.1 PFAM: Caspase domain YP_005027160.1 manually curated YP_005027163.1 PFAM: Bacterial TniB protein YP_005027164.1 PFAM: Integrase core domain YP_005027165.1 PFAM: TnsA endonuclease N terminal YP_005027166.1 PFAM: HD domain; Response regulator receiver domain YP_005027167.1 PFAM: Phosphoglycerate mutase family YP_005027168.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box YP_005027169.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_005027170.1 PFAM: Peptidase propeptide and YPEB domain YP_005027171.1 PFAM: Predicted permease YP_005027172.1 TIGRFAM: small redox-active disulfide protein 2 YP_005027173.1 PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II YP_005027174.1 PFAM: Cytochrome c YP_005027175.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG YP_005027176.1 PFAM: Metallo-beta-lactamase superfamily YP_005027177.1 PFAM: Sigma-54 interaction domain; PAS fold YP_005027178.1 PFAM: AhpC/TSA family YP_005027180.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep YP_005027182.1 PFAM: Cytochrome c YP_005027184.1 PFAM: HD domain; PAS fold YP_005027185.1 PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005027186.1 PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein YP_005027187.1 PFAM: ArsC family; TIGRFAM: nitrogenase-associated protein YP_005027189.1 PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB YP_005027190.1 PFAM: 4Fe-4S binding domain YP_005027191.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_005027192.1 PFAM: NifZ domain; NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT YP_005027193.1 manually curated YP_005027196.1 PFAM: MaoC like domain YP_005027197.1 PFAM: NAD dependent epimerase/dehydratase family YP_005027198.1 PFAM: Chemotaxis phosphatase, CheZ YP_005027199.1 PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase YP_005027200.1 PFAM: Dinitrogenase reductase ADP-ribosyltransferase (DRAT) YP_005027201.1 PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein YP_005027202.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain YP_005027203.1 PFAM: Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain YP_005027204.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_005027205.1 TIGRFAM: small redox-active disulfide protein 2 YP_005027206.1 PFAM: Predicted permease YP_005027207.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, SigZ family; RNA polymerase sigma factor, sigma-70 family YP_005027208.1 PFAM: Peptidase family U32 YP_005027209.1 PFAM: Peptidase family U32 YP_005027210.1 PFAM: SCP-2 sterol transfer family YP_005027211.1 PFAM: MgtC family YP_005027212.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027214.1 PFAM: Endonuclease V YP_005027215.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_005027216.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027217.1 PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I YP_005027218.1 PFAM: Metallo-beta-lactamase superfamily YP_005027219.1 PFAM: MerR, DNA binding; MerR family regulatory protein YP_005027220.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_005027221.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_005027222.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_005027223.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_005027224.1 PFAM: DSBA-like thioredoxin domain YP_005027225.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein YP_005027226.1 PFAM: Carboxyl transferase domain YP_005027227.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_005027228.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_005027229.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027230.1 PFAM: HMGL-like YP_005027231.1 PFAM: Protein of unknown function (DUF1289) YP_005027232.1 PFAM: Protein of unknown function (DUF1289) YP_005027233.1 PFAM: Metallo-beta-lactamase superfamily YP_005027235.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_005027236.1 PFAM: P-loop ATPase protein family YP_005027237.1 PFAM: Protein of unknown function (DUF1312) YP_005027238.1 PFAM: Heptaprenyl diphosphate synthase component I YP_005027239.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases YP_005027240.1 PFAM: ATP-dependent protease La (LON) domain YP_005027241.1 PFAM: Major Facilitator Superfamily; manually curated YP_005027242.1 PFAM: Transglycosylase SLT domain YP_005027243.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027244.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: A/G-specific adenine glycosylase YP_005027245.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_005027246.1 PFAM: Protein of unknown function DUF58 YP_005027248.1 PFAM: Prolyl oligopeptidase family YP_005027249.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2 YP_005027250.1 PFAM: Flavin reductase like domain YP_005027251.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005027252.1 PFAM: Major Facilitator Superfamily YP_005027253.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2242) YP_005027254.1 PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005027255.1 PFAM: Receptor family ligand binding region YP_005027256.1 PFAM: EAL domain; GGDEF domain; CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027257.1 PFAM: Receptor family ligand binding region YP_005027258.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_005027259.1 PFAM: Thiazole biosynthesis protein ThiG YP_005027261.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_005027264.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_005027265.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005027266.1 PFAM: Predicted permease YP_005027267.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE YP_005027268.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_005027269.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_005027270.1 PFAM: Peptidase M16 inactive domain YP_005027271.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_005027272.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_005027274.1 PFAM: Dynamin family YP_005027275.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_005027277.1 PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB YP_005027278.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_005027279.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_005027280.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_005027281.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_005027282.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_005027283.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase YP_005027284.1 PFAM: Phospholipase D Active site motif YP_005027285.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_005027286.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_005027290.1 PFAM: Rhodanese-like domain YP_005027291.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_005027293.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005027294.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I) YP_005027295.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_005027296.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_005027297.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme YP_005027298.1 PFAM: Sporulation related domain YP_005027299.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_005027300.1 PFAM: Protein of unknown function (DUF1342) YP_005027301.1 PFAM: Domain of unknown function (DUF329) YP_005027302.1 PFAM: NUDIX domain; Thiamine monophosphate synthase/TENI; TIGRFAM: mutator mutT protein; thiamine-phosphate pyrophosphorylase YP_005027303.1 PFAM: Protein of unknown function (DUF815) YP_005027304.1 PFAM: MltA specific insert domain; 3D domain YP_005027305.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_005027307.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Cu(I)-responsive transcriptional regulator; manually curated YP_005027308.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_005027309.1 PFAM: Heavy-metal-associated domain YP_005027310.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase YP_005027311.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator YP_005027312.1 PFAM: Cytochrome c YP_005027313.1 PFAM: Protein of unknown function, DUF; manually curated YP_005027314.1 PFAM: Copper binding periplasmic protein CusF; manually curated YP_005027315.1 PFAM: Outer membrane efflux protein YP_005027316.1 PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit YP_005027317.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_005027319.1 PFAM: E1-E2 ATPase; YHS domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_005027321.1 PFAM: Protein of unknown function (DUF2933); manually curated YP_005027322.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_005027323.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_005027324.1 PFAM: Copper resistance protein K YP_005027327.1 PFAM: Phage protein Gp37/Gp68 YP_005027328.1 PFAM: TnsA endonuclease N terminal YP_005027333.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027334.1 PFAM: Disulfide bond isomerase protein N-terminus YP_005027335.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_005027337.1 PFAM: Shikimate kinase YP_005027338.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_005027339.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_005027340.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit YP_005027342.1 PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_005027344.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_005027346.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005027347.1 PFAM: Thioesterase superfamily YP_005027348.1 PFAM: ArgK protein; Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain YP_005027349.1 PFAM: Nitroreductase family YP_005027350.1 PFAM: Cyclic nucleotide-binding domain YP_005027351.1 PFAM: AMP-binding enzyme YP_005027352.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005027353.1 PFAM: Branched-chain amino acid transport system / permease component YP_005027354.1 PFAM: Branched-chain amino acid transport system / permease component YP_005027355.1 PFAM: Receptor family ligand binding region YP_005027356.1 PFAM: ABC transporter YP_005027357.1 PFAM: AMP-binding enzyme YP_005027358.1 PFAM: CoA-transferase family III YP_005027359.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027360.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_005027361.1 PFAM: Membrane transport protein YP_005027362.1 PFAM: Glutathione peroxidase YP_005027363.1 PFAM: SCO1/SenC YP_005027364.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH YP_005027365.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_005027366.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027367.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_005027368.1 PFAM: Malonyl-CoA decarboxylase (MCD) YP_005027369.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_005027370.1 PFAM: Phage integrase family YP_005027371.1 PFAM: Outer membrane efflux protein YP_005027372.1 PFAM: HlyD family secretion protein YP_005027373.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_005027377.1 PFAM: Major Facilitator Superfamily YP_005027378.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; manually curated YP_005027379.1 PFAM: Chromate resistance exported protein YP_005027380.1 PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family YP_005027381.1 manually curated YP_005027382.1 PFAM: Chromate resistance exported protein YP_005027383.1 PFAM: Major Facilitator Superfamily YP_005027386.1 PFAM: Phage integrase family YP_005027387.1 PFAM: Phage integrase family YP_005027388.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_005027389.1 PFAM: High-affinity nickel-transport protein YP_005027390.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005027391.1 PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR YP_005027392.1 PFAM: Peptidase family M48 YP_005027393.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein YP_005027394.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005027395.1 PFAM: Nickel-dependent hydrogenase YP_005027396.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA) YP_005027397.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005027398.1 PFAM: Enoyl-CoA hydratase/isomerase family; Formyl transferase; Formyl transferase, C-terminal domain YP_005027399.1 PFAM: ZIP Zinc transporter YP_005027401.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE YP_005027402.1 PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD YP_005027403.1 PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF YP_005027404.1 PFAM: Transglutaminase-like superfamily YP_005027405.1 PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF YP_005027406.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB YP_005027407.1 PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA YP_005027408.1 PFAM: Nickel-dependent hydrogenase YP_005027409.1 PFAM: Cytochrome c; Di-haem cytochrome c peroxidase YP_005027410.1 PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA YP_005027411.1 PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB YP_005027412.1 PFAM: Cytochrome C assembly protein; TIGRFAM: heme exporter protein CcmC YP_005027413.1 PFAM: Heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD YP_005027414.1 PFAM: CcmE YP_005027415.1 PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF YP_005027416.1 PFAM: Redoxin YP_005027417.1 PFAM: Cytochrome C biogenesis protein YP_005027418.1 TIGRFAM: cytochrome c-type biogenesis protein CcmI YP_005027419.1 PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family YP_005027420.1 PFAM: Ethylbenzene dehydrogenase YP_005027421.1 TIGRFAM: ferredoxin-type protein NapF YP_005027422.1 PFAM: S4 domain YP_005027423.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family YP_005027424.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005027425.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_005027427.1 PFAM: Frataxin-like domain; TIGRFAM: iron donor protein CyaY YP_005027428.1 PFAM: DsrE/DsrF-like family YP_005027429.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_005027430.1 PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM YP_005027431.1 PFAM: Fimbrial assembly protein (PilN) YP_005027432.1 PFAM: Pilus assembly protein, PilO YP_005027433.1 PFAM: Pilus assembly protein, PilP YP_005027434.1 PFAM: Secretin and TonB N terminus short domain; Bacterial type II/III secretion system short domain; Localisation of periplasmic protein complexes; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ YP_005027435.1 manually curated YP_005027436.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_005027437.1 PFAM: PhoH-like protein YP_005027438.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_005027439.1 PFAM: CBS domain; Transporter associated domain YP_005027440.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_005027441.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_005027442.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_005027443.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain YP_005027444.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_005027445.1 PFAM: Protein of unknown function DUF45 YP_005027446.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase YP_005027447.1 PFAM: Response regulator receiver domain YP_005027449.1 PFAM: Hemolysin-type calcium-binding repeat (2 copies) YP_005027450.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_005027451.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_005027452.1 PFAM: Yqey-like protein YP_005027453.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_005027454.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_005027455.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase YP_005027456.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_005027457.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_005027458.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_005027459.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_005027460.1 PFAM: Chalcone-flavanone isomerase YP_005027461.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_005027463.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_005027464.1 PFAM: Rare lipoprotein B family YP_005027465.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_005027466.1 PFAM: FecR protein; Sporulation related domain YP_005027468.1 PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II YP_005027469.1 PFAM: HD domain YP_005027470.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005027471.1 PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_005027472.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005027473.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_005027474.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_005027475.1 PFAM: Putative modulator of DNA gyrase YP_005027476.1 PFAM: Protein of unknown function (DUF615) YP_005027477.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_005027479.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_005027480.1 PFAM: Phosphoglucose isomerase YP_005027481.1 PFAM: Dihydrofolate reductase YP_005027482.1 PFAM: FecR protein YP_005027484.1 PFAM: FecR protein YP_005027485.1 PFAM: Protein of unknown function (DUF560) YP_005027486.1 PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal domain YP_005027487.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase YP_005027488.1 PFAM: ParA/MinD ATPase like YP_005027489.1 PFAM: tRNA synthetases class I (M); Anticodon-binding domain; Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_005027491.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1 YP_005027492.1 PFAM: Acylphosphatase YP_005027494.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family YP_005027495.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor YP_005027496.1 PFAM: Cupin domain YP_005027498.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_005027499.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005027500.1 PFAM: Pirin YP_005027501.1 PFAM: NADPH-dependent FMN reductase YP_005027502.1 PFAM: Response regulator receiver domain YP_005027503.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005027504.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005027505.1 PFAM: Phosphoglycerate mutase family YP_005027506.1 PFAM: Serine hydroxymethyltransferase YP_005027507.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_005027508.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_005027509.1 PFAM: MoeZ/MoeB domain; ThiF family YP_005027511.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_005027512.1 PFAM: Peptidase family M23 YP_005027513.1 PFAM: Bacterial regulatory protein, arsR family YP_005027514.1 PFAM: Rhodanese-like domain YP_005027515.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family YP_005027516.1 PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB YP_005027517.1 PFAM: Bacterial SH3 domain YP_005027518.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_005027519.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_005027520.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein YP_005027521.1 PFAM: Bacterial type II secretion system protein F domain YP_005027522.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005027523.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005027524.1 PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005027526.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005027532.1 manually curated YP_005027533.1 PFAM: Secretin N-terminal domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: pilus (MSHA type) biogenesis protein MshL YP_005027534.1 PFAM: Uncharacterized conserved protein (DUF2075) YP_005027536.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase YP_005027537.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_005027538.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase YP_005027539.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC YP_005027540.1 PFAM: Ferric reductase like transmembrane component YP_005027541.1 PFAM: Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_005027543.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005027544.1 PFAM: Secreted repeat of unknown function YP_005027545.1 PFAM: Cytochrome c YP_005027546.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB YP_005027547.1 PFAM: Delta-aminolevulinic acid dehydratase YP_005027548.1 PFAM: Bacterial regulatory proteins, tetR family YP_005027549.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; pyrimidine 5'-nucleotidase YP_005027550.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_005027551.1 PFAM: Hsp20/alpha crystallin family YP_005027553.1 PFAM: NUDIX domain YP_005027554.1 PFAM: Barstar (barnase inhibitor) YP_005027555.1 PFAM: ribonuclease YP_005027556.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_005027557.1 PFAM: Protein of unknown function (DUF502) YP_005027558.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_005027559.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_005027560.1 PFAM: Bacterial type II secretion system protein F domain YP_005027561.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: type IV-A pilus assembly ATPase PilB; manually curated YP_005027562.1 PFAM: Cytochrome C assembly protein YP_005027563.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_005027564.1 PFAM: Transglycosylase SLT domain YP_005027565.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_005027566.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_005027567.1 PFAM: CBS domain YP_005027568.1 PFAM: CNP1-like family; manually curated YP_005027569.1 PFAM: Ubiquinone biosynthesis protein COQ7 YP_005027570.1 PFAM: OsmC-like protein YP_005027571.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_005027572.1 PFAM: Ribosomal protein S9/S16 YP_005027574.1 PFAM: Protein of unknown function, DUF583 YP_005027575.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_005027576.1 PFAM: Peptidase family M23 YP_005027577.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_005027578.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_005027579.1 PFAM: alpha/beta hydrolase fold YP_005027580.1 PFAM: Metallo-beta-lactamase superfamily YP_005027581.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_005027582.1 PFAM: ThiF family YP_005027583.1 PFAM: HD domain; Hpt domain YP_005027584.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_005027587.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_005027588.1 PFAM: MaoC like domain YP_005027589.1 PFAM: Flagellar hook-associated protein 2 C-terminus YP_005027590.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_005027594.1 PFAM: Peptidase family M23 YP_005027595.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_005027597.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005027598.1 PFAM: Domain of unknown function (DUF1987) YP_005027600.1 PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE) YP_005027602.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_005027603.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_005027606.1 PFAM: EamA-like transporter family YP_005027607.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005027608.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027609.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA YP_005027610.1 PFAM: Protein of unknown function (DUF540) YP_005027611.1 PFAM: Probable molybdopterin binding domain YP_005027612.1 PFAM: Phasin protein; TIGRFAM: phasin family protein YP_005027613.1 PFAM: Phasin protein; TIGRFAM: phasin family protein YP_005027614.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_005027615.1 PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA YP_005027616.1 PFAM: Protein of unknown function (DUF1239) YP_005027617.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA YP_005027618.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_005027619.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family YP_005027620.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005027622.1 PFAM: Adenylate and Guanylate cyclase catalytic domain YP_005027623.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005027628.1 PFAM: Bacterial type II secretion system protein F domain YP_005027629.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein YP_005027631.1 PFAM: Bacterial type II and III secretion system protein; TIGRFAM: pilus (MSHA type) biogenesis protein MshL YP_005027633.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005027634.1 PFAM: ABC transporter YP_005027635.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_005027636.1 PFAM: mce related protein YP_005027637.1 PFAM: VacJ like lipoprotein YP_005027638.1 PFAM: Toluene tolerance, Ttg2 YP_005027639.1 PFAM: STAS domain YP_005027640.1 PFAM: ABC transporter YP_005027641.1 PFAM: ABC-2 type transporter YP_005027642.1 PFAM: BolA-like protein YP_005027643.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005027644.1 PFAM: NifZ domain YP_005027645.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_005027646.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase YP_005027647.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_005027648.1 PFAM: Chromate transporter YP_005027649.1 PFAM: Chromate transporter YP_005027650.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_005027651.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_005027652.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_005027653.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_005027654.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_005027655.1 PFAM: Phosphoribosyl-AMP cyclohydrolase YP_005027656.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_005027657.1 PFAM: HIT domain YP_005027658.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_005027659.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB YP_005027660.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_005027661.1 PFAM: Glutamine amidotransferases class-II YP_005027662.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; periplasmic serine pepetdase DegS YP_005027663.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_005027664.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_005027665.1 PFAM: EAL domain; HAMP domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027666.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027668.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_005027669.1 stimulates methylation of MCP proteins YP_005027670.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_005027671.1 PFAM: CheW-like domain YP_005027672.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027673.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_005027674.1 PFAM: STAS domain YP_005027675.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027676.1 PFAM: Response regulator receiver domain YP_005027677.1 PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase YP_005027678.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005027679.1 PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase YP_005027680.1 PFAM: Protein of unknown function (DUF2889) YP_005027681.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_005027682.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_005027683.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family YP_005027684.1 PFAM: Ornithine cyclodeaminase/mu-crystallin family YP_005027685.1 PFAM: Protein kinase domain; CHASE2 domain YP_005027686.1 PFAM: Protein phosphatase 2C YP_005027687.1 PFAM: FHA domain YP_005027688.1 PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain YP_005027689.1 PFAM: cAMP phosphodiesterases class-II YP_005027690.1 PFAM: Rhodanese-like domain; Cyclic nucleotide-binding domain YP_005027691.1 PFAM: GAF domain; GSPII_E N-terminal domain; Type II/IV secretion system protein YP_005027692.1 PFAM: HD domain; GAF domain; manually curated YP_005027693.1 PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005027694.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA YP_005027695.1 PFAM: CYTH domain; CHAD domain YP_005027696.1 PFAM: Cyclic nucleotide-binding domain YP_005027697.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005027698.1 PFAM: ABC transporter YP_005027699.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold YP_005027700.1 PFAM: Aldehyde dehydrogenase family YP_005027701.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_005027702.1 PFAM: Predicted permease YP_005027703.1 PFAM: Predicted permease YP_005027704.1 PFAM: Protein of unknown function DUF88; TIGRFAM: TIGR00288 family protein YP_005027705.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_005027706.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_005027707.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_005027708.1 PFAM: Deoxynucleoside kinase YP_005027709.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027714.1 manually curated YP_005027716.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2136) YP_005027717.1 PFAM: Domain of unknown function (DUF955) YP_005027719.1 PFAM: NC domain YP_005027720.1 PFAM: Protein of unknown function DUF45 YP_005027722.1 TIGRFAM: DNA binding domain, excisionase family; manually curated YP_005027723.1 PFAM: Hsp20/alpha crystallin family YP_005027724.1 PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA) YP_005027725.1 PFAM: Phospholipase D Active site motif YP_005027726.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_005027727.1 PFAM: Hsp20/alpha crystallin family YP_005027728.1 PFAM: YfdX protein YP_005027729.1 PFAM: YfdX protein YP_005027732.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_005027733.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; manually curated YP_005027734.1 PFAM: Phosphate-starvation-inducible E YP_005027735.1 PFAM: Peptidase family M48 YP_005027736.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_005027737.1 PFAM: Phage lysozyme YP_005027738.1 PFAM: Integrase core domain YP_005027739.1 PFAM: IstB-like ATP binding protein YP_005027740.1 PFAM: Integrase core domain YP_005027742.1 PFAM: Citrate transporter; manually curated YP_005027744.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_005027745.1 PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase YP_005027746.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_005027747.1 PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda YP_005027748.1 PFAM: Domain of unknown function DUF20 YP_005027749.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_005027750.1 PFAM: Cytochrome c YP_005027752.1 PFAM: Protein kinase domain YP_005027753.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_005027754.1 PFAM: MarR family YP_005027755.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein YP_005027758.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHAD domain YP_005027759.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005027761.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027762.1 PFAM: Fatty acid desaturase YP_005027763.1 PFAM: Disulfide bond formation protein DsbB YP_005027764.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_005027765.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_005027766.1 PFAM: PilZ domain YP_005027767.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_005027768.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_005027769.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_005027770.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding YP_005027771.1 PFAM: Cytochrome c YP_005027772.1 PFAM: Mechanosensitive ion channel YP_005027773.1 PFAM: NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_005027774.1 PFAM: Protein of unknown function (DUF3108) YP_005027775.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_005027777.1 PFAM: SNARE associated Golgi protein YP_005027778.1 PFAM: Response regulator receiver domain YP_005027779.1 PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box YP_005027780.1 PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005027781.1 PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_005027782.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_005027783.1 PFAM: TfoX N-terminal domain YP_005027784.1 PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); PAS fold; TIGRFAM: PAS domain S-box YP_005027785.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_005027786.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005027787.1 PFAM: Phosphoglycerate kinase YP_005027788.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I YP_005027790.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_005027791.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_005027792.1 PFAM: Phosphoribulokinase / Uridine kinase family YP_005027793.1 PFAM: Fructose-1-6-bisphosphatase YP_005027794.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005027795.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005027796.1 PFAM: Inositol monophosphatase family YP_005027797.1 PFAM: AhpC/TSA family YP_005027798.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_005027799.1 PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase YP_005027800.1 PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase YP_005027801.1 PFAM: Bacterial Fe(2+) trafficking YP_005027803.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_005027804.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); Putative sugar-binding domain; TIGRFAM: ribose 5-phosphate isomerase YP_005027806.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase YP_005027807.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form YP_005027808.1 PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type YP_005027809.1 PFAM: Receptor family ligand binding region YP_005027810.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005027811.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005027812.1 PFAM: Cysteine-rich domain YP_005027813.1 PFAM: Domain of unknown function (DUF3390); Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein YP_005027814.1 PFAM: Uncharacterised ACR, YkgG family COG1556 YP_005027815.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_005027816.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain YP_005027817.1 PFAM: Organic solvent tolerance protein; OstA-like protein YP_005027818.1 PFAM: Phosphotransferase enzyme family YP_005027819.1 PFAM: Nucleotidyl transferase YP_005027821.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24 YP_005027822.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_005027823.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_005027824.1 PFAM: Bacterial regulatory protein, Fis family YP_005027825.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_005027826.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_005027827.1 PFAM: Coproporphyrinogen III oxidase YP_005027829.1 PFAM: HemY protein N-terminus YP_005027830.1 PFAM: HemX YP_005027831.1 PFAM: Uroporphyrinogen-III synthase HemD YP_005027832.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_005027833.1 PFAM: Phosphoenolpyruvate carboxylase YP_005027834.1 PFAM: GPR1/FUN34/yaaH family YP_005027835.1 PFAM: AMP-binding enzyme YP_005027836.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_005027837.1 PFAM: Rhodanese-like domain; SNARE associated Golgi protein YP_005027839.1 PFAM: Thiopurine S-methyltransferase (TPMT) YP_005027840.1 PFAM: Protein of unknown function (DUF3079) YP_005027842.1 PFAM: Cytochrome c YP_005027845.1 PFAM: Nitroreductase family YP_005027846.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005027847.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005027848.1 PFAM: Sulfatase; Domain of unknown function (DUF1705) YP_005027849.1 PFAM: PAP2 superfamily YP_005027850.1 PFAM: Prokaryotic diacylglycerol kinase YP_005027851.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_005027852.1 PFAM: short chain dehydrogenase YP_005027853.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_005027854.1 PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type YP_005027855.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I YP_005027856.1 PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II YP_005027857.1 PFAM: Cbb3-type cytochrome oxidase component FixQ YP_005027858.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III YP_005027859.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG YP_005027860.1 PFAM: FixH YP_005027861.1 PFAM: Protein of unknown function (DUF3149) YP_005027862.1 PFAM: Universal stress protein family YP_005027863.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_005027864.1 PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I YP_005027865.1 PFAM: 2-nitropropane dioxygenase YP_005027866.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027867.1 PFAM: Metallo-beta-lactamase superfamily YP_005027868.1 PFAM: Hemerythrin HHE cation binding domain YP_005027869.1 PFAM: SirA-like protein YP_005027871.1 PFAM: NnrS protein YP_005027872.1 PFAM: Invasion gene expression up-regulator, SirB YP_005027873.1 PFAM: Hemerythrin HHE cation binding domain YP_005027874.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_005027875.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_005027876.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_005027877.1 PFAM: Universal stress protein family YP_005027878.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_005027879.1 PFAM: Heavy-metal-associated domain YP_005027880.1 PFAM: FeoA domain YP_005027881.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_005027883.1 PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein YP_005027885.1 PFAM: Carbohydrate-selective porin, OprB family YP_005027886.1 PFAM: Fe2+ transport protein YP_005027887.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325) YP_005027888.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein YP_005027890.1 PFAM: Flavodoxin; Oxidoreductase NAD-binding domain YP_005027891.1 PFAM: Nickel uptake substrate-specific transmembrane region YP_005027892.1 PFAM: Predicted periplasmic protein (DUF2271) YP_005027893.1 PFAM: PepSY-associated TM helix YP_005027894.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_005027895.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_005027896.1 PFAM: FMN-dependent dehydrogenase YP_005027897.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_005027898.1 PFAM: Di-haem cytochrome c peroxidase YP_005027899.1 PFAM: TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain YP_005027900.1 PFAM: FecR protein YP_005027901.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005027902.1 PFAM: EAL domain YP_005027903.1 PFAM: Uncharacterized conserved protein (DUF2149) YP_005027904.1 PFAM: MotA/TolQ/ExbB proton channel family YP_005027905.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_005027907.1 PFAM: CobN/Magnesium Chelatase YP_005027908.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein YP_005027909.1 PFAM: Hemin uptake protein hemP YP_005027910.1 PFAM: Biopolymer transport protein ExbD/TolR YP_005027911.1 PFAM: MotA/TolQ/ExbB proton channel family YP_005027912.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_005027913.1 PFAM: Inorganic pyrophosphatase YP_005027914.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_005027915.1 PFAM: Nitrogen regulatory protein P-II YP_005027916.1 PFAM: Smr domain YP_005027917.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_005027918.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; manually curated YP_005027919.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_005027920.1 PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA YP_005027921.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_005027923.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_005027924.1 PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3 YP_005027925.1 PFAM: Small Multidrug Resistance protein YP_005027926.1 PFAM: Protein of unknown function, DUF599 YP_005027927.1 PFAM: HNH endonuclease YP_005027928.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_005027929.1 PFAM: NUDIX domain YP_005027930.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA YP_005027931.1 PFAM: OmpA family YP_005027932.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027933.1 PFAM: Response regulator receiver domain YP_005027934.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_005027935.1 PFAM: CheW-like domain YP_005027936.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box YP_005027937.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_005027938.1 stimulates methylation of MCP proteins YP_005027939.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_005027940.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_005027941.1 PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE) YP_005027942.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005027943.1 PFAM: CheW-like domain; Response regulator receiver domain YP_005027944.1 PFAM: CheW-like domain; Response regulator receiver domain YP_005027945.1 PFAM: Response regulator receiver domain YP_005027946.1 PFAM: Chemotaxis phosphatase, CheZ YP_005027947.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_005027948.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB YP_005027949.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_005027950.1 PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF YP_005027951.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005027952.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family YP_005027953.1 PFAM: MotA/TolQ/ExbB proton channel family YP_005027954.1 PFAM: OmpA family YP_005027955.1 PFAM: FlgN protein YP_005027956.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM YP_005027957.1 PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA YP_005027958.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_005027959.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC YP_005027960.1 PFAM: Flagellar hook capping protein YP_005027961.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins YP_005027962.1 PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_005027963.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria YP_005027964.1 PFAM: Flagellar L-ring protein YP_005027965.1 PFAM: Flagellar P-ring protein YP_005027966.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ YP_005027967.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK YP_005027968.1 PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3 YP_005027970.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_005027971.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ YP_005027972.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_005027973.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO YP_005027974.1 PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN YP_005027975.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM YP_005027976.1 PFAM: Flagellar basal body-associated protein FliL YP_005027977.1 PFAM: Flagellar hook-length control protein FliK YP_005027978.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ YP_005027979.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI YP_005027980.1 PFAM: Flagellar assembly protein FliH YP_005027981.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG YP_005027982.1 PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_005027983.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005027984.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005027985.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE YP_005027986.1 PFAM: Tetratricopeptide repeat YP_005027987.1 PFAM: Methyltransferase domain YP_005027988.1 PFAM: Methyltransferase domain YP_005027989.1 TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC YP_005027990.1 PFAM: Phosphopantetheine attachment site YP_005027993.1 PFAM: Methyltransferase domain YP_005027994.1 PFAM: WxcM-like, C-terminal YP_005027995.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_005027998.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, PrtD family YP_005027999.1 PFAM: ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family YP_005028001.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_005028002.1 PFAM: PilZ domain; YcgR protein YP_005028003.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein YP_005028004.1 PFAM: Flagellar hook-length control protein FliK YP_005028005.1 PFAM: Flagellar protein FliT YP_005028006.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS YP_005028007.1 PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif YP_005028008.1 PFAM: FlaG protein YP_005028009.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_005028010.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_005028011.1 PFAM: Tetratricopeptide repeat YP_005028012.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); Tetratricopeptide repeat YP_005028013.1 PFAM: Macrocin-O-methyltransferase (TylF); Glycosyl transferases group 1; Glycosyl transferase family 2 YP_005028014.1 PFAM: Vibrio cholerae RfbT protein; TIGRFAM: methyltransferase, FkbM family YP_005028015.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005028016.1 PFAM: Phage integrase family YP_005028017.1 PFAM: Protein of unknown function (DUF3296) YP_005028019.1 PFAM: Prophage CP4-57 regulatory protein (AlpA); manually curated YP_005028020.1 manually curated YP_005028021.1 PFAM: Domain of unknown function (DUF932); TIGRFAM: phage/plasmid-related protein TIGR03299 YP_005028022.1 PFAM: YqaJ-like viral recombinase domain; TIGRFAM: putative phage-type endonuclease; manually curated YP_005028023.1 PFAM: IstB-like ATP binding protein YP_005028024.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_005028025.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005028026.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III tau subunit V interacting with alpha; DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau YP_005028027.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_005028028.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_005028029.1 PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_005028030.1 PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD YP_005028031.1 PFAM: Cytochrome C1 family YP_005028032.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_005028033.1 PFAM: Stringent starvation protein B YP_005028034.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_005028035.1 PFAM: Glycosyl transferase family, helical bundle domain YP_005028036.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme YP_005028037.1 PFAM: Receptor family ligand binding region YP_005028038.1 PFAM: alpha/beta hydrolase fold YP_005028039.1 PFAM: Protein of unknown function (DUF1294) YP_005028040.1 PFAM: Penicillin binding protein transpeptidase domain YP_005028041.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028042.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_005028043.1 PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_005028044.1 PFAM: CbiX YP_005028045.1 PFAM: Response regulator receiver domain; ANTAR domain YP_005028046.1 PFAM: Hemerythrin HHE cation binding domain YP_005028047.1 PFAM: Yip1 domain YP_005028049.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein YP_005028050.1 PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D YP_005028052.1 PFAM: Glycosyl transferases group 1 YP_005028053.1 PFAM: HD domain YP_005028054.1 PFAM: Small Multidrug Resistance protein YP_005028055.1 PFAM: Spermine/spermidine synthase YP_005028061.1 PFAM: Protein of unknown function DUF47 YP_005028062.1 PFAM: Phosphate transporter family YP_005028063.1 PFAM: Phospholipase A1 YP_005028064.1 PFAM: Acetyltransferase (GNAT) family YP_005028065.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_005028066.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_005028067.1 PFAM: Bacterial regulatory protein, arsR family YP_005028068.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028069.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005028073.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme YP_005028074.1 PFAM: EamA-like transporter family YP_005028075.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028077.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028078.1 PFAM: Hpt domain YP_005028079.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005028080.1 PFAM: HD domain; Response regulator receiver domain YP_005028081.1 PFAM: FIST C domain; FIST N domain YP_005028082.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box YP_005028083.1 PFAM: Response regulator receiver domain YP_005028084.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028085.1 PFAM: Domain of unknown function (DUF3391); HD domain YP_005028087.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_005028088.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_005028089.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005028090.1 PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family YP_005028091.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_005028093.1 PFAM: Bacterial regulatory proteins, tetR family YP_005028094.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_005028095.1 PFAM: EamA-like transporter family YP_005028096.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1 YP_005028097.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028098.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain YP_005028099.1 PFAM: ABC transporter YP_005028100.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028101.1 PFAM: Response regulator receiver domain YP_005028102.1 PFAM: HD domain; Response regulator receiver domain YP_005028103.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005028104.1 PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG YP_005028106.1 PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005028107.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_005028108.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028109.1 PFAM: Protein of unknown function (DUF1304) YP_005028110.1 PFAM: E3 Ubiquitin ligase YP_005028111.1 PFAM: LemA family YP_005028112.1 PFAM: Major Facilitator Superfamily YP_005028114.1 PFAM: HDOD domain YP_005028115.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_005028117.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin YP_005028118.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit YP_005028119.1 PFAM: Radical SAM superfamily; B12 binding domain YP_005028120.1 PFAM: Aminotransferase class I and II YP_005028121.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box YP_005028122.1 PFAM: Protein of unknown function (DUF554) YP_005028123.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028124.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_005028126.1 PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins YP_005028127.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family YP_005028128.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028130.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_005028131.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_005028132.1 PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT YP_005028133.1 PFAM: YcaO-like family; OsmC-like protein; TIGRFAM: uncharacterized domain; TIGR03549 family protein YP_005028134.1 PFAM: CobN/Magnesium Chelatase YP_005028135.1 PFAM: Uncharacterized conserved protein (DUF2149) YP_005028136.1 PFAM: MotA/TolQ/ExbB proton channel family YP_005028137.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_005028138.1 PFAM: Ribonucleotide reductase, small chain YP_005028139.1 PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit YP_005028140.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_005028141.1 PFAM: ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_005028144.1 PFAM: Prokaryotic membrane lipoprotein lipid attachment site; Cytochrome D1 heme domain YP_005028148.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_005028149.1 PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase YP_005028150.1 PFAM: OmpA family YP_005028151.1 PFAM: Amidohydrolase family YP_005028152.1 PFAM: OmpA family YP_005028153.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_005028154.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_005028155.1 PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2 YP_005028156.1 PFAM: Prephenate dehydrogenase YP_005028157.1 PFAM: Cytidylate kinase; EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: cytidylate kinase; 3-phosphoshikimate 1-carboxyvinyltransferase YP_005028158.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_005028159.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit YP_005028160.1 PFAM: Protein of unknown function (DUF1049) YP_005028162.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_005028163.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_005028164.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_005028165.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_005028166.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_005028167.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I YP_005028168.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase YP_005028169.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B YP_005028170.1 PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005028171.1 PFAM: Rhodanese-like domain YP_005028172.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_005028173.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; manually curated YP_005028174.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_005028175.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_005028176.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_005028177.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_005028178.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit YP_005028179.1 PFAM: MerR family regulatory protein YP_005028180.1 PFAM: H-NS histone family YP_005028181.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_005028182.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_005028183.1 PFAM: Peptidase family M23; LysM domain YP_005028184.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family YP_005028185.1 TIGRFAM: lytic murein transglycosylase B YP_005028186.1 PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488) YP_005028187.1 PFAM: Protein of unknown function DUF58 YP_005028188.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_005028189.1 PFAM: Histone deacetylase domain YP_005028190.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_005028191.1 PFAM: NlpB/DapX lipoprotein YP_005028192.1 PFAM: Metallo-beta-lactamase superfamily YP_005028194.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_005028195.1 PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain YP_005028196.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit YP_005028197.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin) YP_005028198.1 PFAM: Bacterial protein of unknown function (DUF934) YP_005028199.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_005028200.1 PFAM: Sulfite exporter TauE/SafE YP_005028201.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028202.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_005028203.1 manually curated YP_005028204.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_005028205.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_005028206.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_005028207.1 PFAM: NADPH-dependent FMN reductase YP_005028208.1 PFAM: Transglutaminase-like superfamily YP_005028209.1 PFAM: PhoH-like protein YP_005028210.1 PFAM: AhpC/TSA family YP_005028211.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_005028212.1 PFAM: Endoribonuclease L-PSP YP_005028214.1 PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_005028215.1 PFAM: Uncharacterized protein family, UPF0114; TIGRFAM: TIGR00645 family protein YP_005028216.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_005028217.1 PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294 YP_005028218.1 PFAM: Exonuclease YP_005028219.1 PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily YP_005028220.1 TIGRFAM: putative solute:sodium symporter small subunit YP_005028221.1 PFAM: Tetratricopeptide repeat YP_005028222.1 PFAM: Staphylococcal nuclease homologue; manually curated YP_005028224.1 PFAM: Peptidase U49 YP_005028225.1 PFAM: IstB-like ATP binding protein YP_005028226.1 PFAM: Integrase core domain YP_005028229.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_005028230.1 PFAM: Mu transposase, C-terminal; Integrase core domain YP_005028231.1 manually curated YP_005028233.1 PFAM: Protein of unknown function (DUF1311) YP_005028235.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028236.1 PFAM: alpha/beta hydrolase fold YP_005028237.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005028238.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_005028239.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_005028240.1 PFAM: GIY-YIG catalytic domain YP_005028241.1 PFAM: alpha/beta hydrolase fold YP_005028242.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I YP_005028243.1 PFAM: Acyl-ACP thioesterase YP_005028244.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028245.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028246.1 PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005028247.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028248.1 PFAM: Protein of unknown function (DUF2917) YP_005028249.1 PFAM: Putative lysophospholipase YP_005028250.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_005028251.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_005028253.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_005028254.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_005028255.1 PFAM: CBS domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase YP_005028256.1 PFAM: Rhodanese-like domain YP_005028257.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325) YP_005028258.1 PFAM: Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028259.1 PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family YP_005028260.1 PFAM: ABC transporter YP_005028261.1 PFAM: ABC transporter; ABC transporter transmembrane region 2 YP_005028265.1 PFAM: HNH endonuclease YP_005028267.1 PFAM: Methyltransferase domain YP_005028268.1 manually curated YP_005028269.1 PFAM: ABC transporter YP_005028270.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005028271.1 PFAM: Branched-chain amino acid transport system / permease component YP_005028272.1 PFAM: Branched-chain amino acid transport system / permease component YP_005028273.1 PFAM: Receptor family ligand binding region YP_005028274.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_005028275.1 PFAM: RF-1 domain YP_005028276.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_005028277.1 PFAM: ARD/ARD' family YP_005028278.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_005028279.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005028280.1 PFAM: ABC transporter YP_005028281.1 PFAM: AMP-binding enzyme YP_005028282.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028283.1 PFAM: Flavodoxin-like fold YP_005028284.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_005028285.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2242) YP_005028286.1 PFAM: Phasin protein; TIGRFAM: phasin family protein YP_005028287.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_005028288.1 PFAM: Cytochrome c; Cytochrome D1 heme domain YP_005028289.1 PFAM: Cyclic nucleotide-binding domain YP_005028290.1 PFAM: Cytochrome c YP_005028291.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028292.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005028293.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_005028294.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_005028297.1 PFAM: NADPH-dependent FMN reductase YP_005028298.1 PFAM: Cytochrome c YP_005028299.1 PFAM: Cytochrome c YP_005028300.1 PFAM: Cytochrome c YP_005028301.1 PFAM: short chain dehydrogenase YP_005028302.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028304.1 PFAM: GumN protein YP_005028306.1 PFAM: Autotransporter beta-domain YP_005028307.1 PFAM: Methyltransferase domain YP_005028308.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028309.1 PFAM: Calcineurin-like phosphoesterase YP_005028311.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005028316.1 PFAM: IstB-like ATP binding protein YP_005028317.1 PFAM: Integrase core domain YP_005028320.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_005028321.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_005028322.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily YP_005028324.1 TIGRFAM: serine O-acetyltransferase YP_005028325.1 PFAM: Rhodanese-like domain YP_005028326.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005028327.1 PFAM: Iron-containing alcohol dehydrogenase YP_005028328.1 PFAM: Coenzyme A transferase YP_005028329.1 PFAM: Coenzyme A transferase YP_005028330.1 PFAM: SCO1/SenC YP_005028331.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005028332.1 PFAM: ABC transporter YP_005028333.1 PFAM: NMT1/THI5 like YP_005028334.1 PFAM: EAL domain YP_005028335.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028336.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005028337.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_005028338.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_005028339.1 PFAM: Domain of Unknown Function (DUF748) YP_005028340.1 PFAM: Bacterial DNA-binding protein YP_005028341.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_005028342.1 PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_005028343.1 PFAM: Helix-turn-helix YP_005028345.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein YP_005028346.1 PFAM: Phospholipase/Carboxylesterase YP_005028347.1 PFAM: Protein of unknown function (DUF3348) YP_005028349.1 PFAM: OmpA family YP_005028350.1 PFAM: Protein of unknown function (DUF2894) YP_005028352.1 PFAM: Uncharacterised protein family UPF0005 YP_005028353.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit YP_005028354.1 PFAM: Putative exonuclease, RdgC YP_005028355.1 PFAM: EAL domain; Cache domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028356.1 PFAM: Type III restriction enzyme, res subunit YP_005028358.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_005028359.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_005028360.1 PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal YP_005028361.1 PFAM: MoaE protein YP_005028363.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028364.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box YP_005028365.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005028366.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028367.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028368.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_005028370.1 PFAM: Uncharacterised protein family (UPF0153) YP_005028371.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028372.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005028373.1 PFAM: FecR protein YP_005028374.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_005028375.1 PFAM: Putative esterase YP_005028378.1 PFAM: Protein of unknown function (DUF3325) YP_005028379.1 PFAM: MarR family YP_005028380.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily YP_005028381.1 PFAM: HDOD domain YP_005028382.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_005028383.1 PFAM: Patatin-like phospholipase YP_005028384.1 PFAM: Methyltransferase domain YP_005028385.1 PFAM: Protein of unknown function (DUF1684) YP_005028386.1 PFAM: Flavin reductase like domain YP_005028388.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_005028389.1 PFAM: Major Facilitator Superfamily YP_005028390.1 PFAM: Aldose 1-epimerase YP_005028392.1 PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_005028393.1 PFAM: Protein of unknown function (DUF3567) YP_005028394.1 PFAM: AMP-binding enzyme YP_005028395.1 PFAM: Protein of unknown function (DUF3460) YP_005028396.1 PFAM: CoA binding domain; Acetyltransferase (GNAT) family; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain YP_005028397.1 PFAM: Tellurite resistance protein TehB YP_005028398.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase YP_005028399.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnD YP_005028400.1 PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC YP_005028401.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_005028402.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_005028403.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_005028404.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; ATP-dependent protease La YP_005028405.1 PFAM: Bacterial DNA-binding protein YP_005028406.1 PFAM: PPIC-type PPIASE domain YP_005028407.1 PFAM: short chain dehydrogenase YP_005028408.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_005028409.1 PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2 YP_005028410.1 PFAM: SpoU rRNA Methylase family YP_005028411.1 PFAM: NnrS protein YP_005028412.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_005028413.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase YP_005028414.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; manually curated YP_005028415.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_005028416.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein YP_005028417.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_005028418.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_005028419.1 PFAM: Protein of unknown function (DUF339) YP_005028420.1 PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_005028421.1 PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component YP_005028422.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) YP_005028423.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_005028425.1 PFAM: AFG1-like ATPase YP_005028426.1 PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein YP_005028427.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease YP_005028428.1 PFAM: Protein of unknown function (DUF454) YP_005028431.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_005028432.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005028433.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005028434.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_005028435.1 PFAM: Bacterial protein of unknown function (DUF894) YP_005028437.1 PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI YP_005028440.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005028441.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005028442.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_005028443.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase YP_005028444.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box YP_005028445.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_005028448.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_005028449.1 PFAM: Domain of unknown function (DUF1924) YP_005028450.1 PFAM: Dihaem cytochrome c YP_005028451.1 PFAM: Prokaryotic cytochrome b561 YP_005028452.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005028453.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor kinase N-terminal YP_005028454.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_005028455.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028456.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_005028457.1 PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter YP_005028458.1 PFAM: Serine hydroxymethyltransferase; manually curated YP_005028459.1 PFAM: Cyclic nucleotide-binding domain YP_005028460.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_005028461.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005028462.1 PFAM: Cupin domain YP_005028464.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_005028467.1 PFAM: Region found in RelA / SpoT proteins YP_005028469.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_005028470.1 PFAM: impB/mucB/samB family YP_005028472.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_005028473.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_005028477.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_005028479.1 PFAM: Helix-turn-helix YP_005028480.1 PFAM: Protein of unknown function (DUF2975) YP_005028481.1 PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein YP_005028482.1 PFAM: PGAP1-like protein YP_005028488.1 PFAM: Putative lysophospholipase YP_005028489.1 PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type YP_005028490.1 PFAM: Protein of unknown function (DUF330) YP_005028491.1 PFAM: mce related protein YP_005028492.1 PFAM: Paraquat-inducible protein A YP_005028493.1 PFAM: Paraquat-inducible protein A YP_005028494.1 PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YP_005028495.1 PFAM: Poly-beta-hydroxybutyrate polymerase N terminal; Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I YP_005028496.1 PFAM: Phasin protein; TIGRFAM: phasin family protein YP_005028497.1 PFAM: Bacterial regulatory proteins, tetR family YP_005028498.1 stimulates methylation of MCP proteins YP_005028499.1 PFAM: AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase YP_005028500.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family YP_005028501.1 PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase YP_005028503.1 PFAM: EAL domain; Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005028504.1 PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_005028505.1 PFAM: Cobalt uptake substrate-specific transmembrane region YP_005028506.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_005028507.1 PFAM: Electron transfer flavoprotein domain YP_005028508.1 PFAM: Bacterial regulatory proteins, tetR family YP_005028509.1 PFAM: ABC transporter YP_005028510.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_005028511.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein YP_005028512.1 PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase YP_005028513.1 PFAM: Isochorismatase family YP_005028514.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase YP_005028515.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_005028516.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_005028517.1 PFAM: Stress responsive A/B Barrel Domain YP_005028518.1 PFAM: Protein of unknown function (DUF1330) YP_005028519.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_005028520.1 PFAM: Septum formation initiator YP_005028521.1 PFAM: Acetyltransferase (GNAT) family; MarR family YP_005028522.1 PFAM: Protein of unknown function (DUF2863) YP_005028523.1 PFAM: Site-specific recombinase YP_005028524.1 PFAM: Protein of unknown function (DUF328) YP_005028525.1 PFAM: Domain of unknown function (DUF1857) YP_005028527.1 PFAM: SEC-C motif YP_005028529.1 TIGRFAM: putative toxin-antitoxin system toxin component, PIN family YP_005028530.1 PFAM: Calcineurin-like phosphoesterase YP_005028531.1 PFAM: FAD dependent oxidoreductase YP_005028532.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_005028533.1 PFAM: META domain; Uncharacterized lipoprotein NlpE involved in copper resistance YP_005028534.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_005028535.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_005028536.1 PFAM: Dihydrouridine synthase (Dus) YP_005028537.1 PFAM: Protein of unknown function, DUF583 YP_005028539.1 PFAM: Uncharacterised protein family (UPF0153) YP_005028540.1 PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG YP_005028541.1 PFAM: ABC-2 type transporter YP_005028542.1 PFAM: ABC transporter YP_005028543.1 PFAM: HlyD family secretion protein YP_005028544.1 PFAM: Bacterial regulatory proteins, tetR family YP_005028545.1 PFAM: S4 domain YP_005028547.1 PFAM: HDOD domain YP_005028548.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1 YP_005028550.1 PFAM: Metallo-beta-lactamase superfamily YP_005028551.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_005028552.1 PFAM: Carboxymuconolactone decarboxylase family YP_005028554.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005028555.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_005028556.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_005028557.1 PFAM: YceI-like domain YP_005028558.1 PFAM: YceI-like domain YP_005028559.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028561.1 PFAM: Response regulator receiver domain; Sigma-54 interaction domain YP_005028563.1 PFAM: Rickettsia 17 kDa surface antigen YP_005028565.1 PFAM: family YP_005028566.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028567.1 PFAM: Inositol monophosphatase family YP_005028568.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1 YP_005028569.1 TIGRFAM: serine O-acetyltransferase YP_005028570.1 PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein YP_005028571.1 PFAM: Aminotransferase class-V YP_005028572.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase IscS YP_005028573.1 PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU YP_005028574.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: iron-sulfur cluster assembly protein IscA; Iron-sulfur cluster assembly accessory protein YP_005028575.1 PFAM: DnaJ domain; HSCB C-terminal oligomerisation domain; TIGRFAM: Fe-S protein assembly co-chaperone HscB YP_005028576.1 PFAM: Hsp70 protein; TIGRFAM: Fe-S protein assembly chaperone HscA YP_005028577.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system YP_005028578.1 PFAM: Protein of unknown function (DUF528); TIGRFAM: FeS assembly protein IscX YP_005028580.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB YP_005028582.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_005028583.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005028585.1 PFAM: Patatin-like phospholipase YP_005028586.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_005028587.1 PFAM: Radical SAM superfamily YP_005028588.1 PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family YP_005028589.1 PFAM: Memo-like protein YP_005028590.1 PFAM: MgtC family YP_005028591.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_005028592.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005028593.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_005028594.1 PFAM: Domain of unknown function (DUF3391); HD domain; TIGRFAM: uncharacterized domain HDIG YP_005028595.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028597.1 PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG YP_005028598.1 PFAM: Cyclic nucleotide-binding domain YP_005028600.1 PFAM: PAP2 superfamily YP_005028601.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028602.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005028604.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_005028605.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_005028606.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_005028607.1 PFAM: LemA family YP_005028608.1 PFAM: Domain of unknown function (DUF477) YP_005028609.1 PFAM: Domain of unknown function (DUF477) YP_005028610.1 PFAM: Major Facilitator Superfamily YP_005028611.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005028612.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_005028613.1 PFAM: GGDEF domain; PAS fold; NMT1/THI5 like; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028614.1 PFAM: KaiC; TIGRFAM: DNA repair protein RadA YP_005028616.1 PFAM: Predicted permease YP_005028619.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_005028620.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028621.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ YP_005028622.1 PFAM: EAL domain YP_005028623.1 PFAM: Bacterial-like globin YP_005028624.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_005028626.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028628.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_005028629.1 PFAM: Cyclic nucleotide-binding domain YP_005028630.1 PFAM: Domain of unknown function DUF20 YP_005028632.1 PFAM: Aminotransferase class I and II YP_005028633.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_005028634.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_005028635.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_005028636.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_005028637.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA YP_005028638.1 PFAM: Rieske [2Fe-2S] domain YP_005028639.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_005028640.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_005028641.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_005028642.1 PFAM: Uncharacterized ACR, COG1399; manually curated YP_005028643.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_005028644.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX YP_005028645.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005028646.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_005028647.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_005028648.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_005028649.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_005028651.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase YP_005028652.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family YP_005028653.1 PFAM: Positive regulator of sigma(E), RseC/MucC YP_005028654.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_005028655.1 PFAM: Glutaredoxin-like domain (DUF836) YP_005028656.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_005028657.1 PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_005028659.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_005028660.1 PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_005028661.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_005028662.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase YP_005028663.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase YP_005028664.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_005028665.1 PFAM: ATP dependent DNA ligase domain YP_005028666.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_005028667.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2331); TIGRFAM: conserved hypothetical protein, PP_1857 family YP_005028668.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_005028669.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_005028670.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005028672.1 PFAM: Protein of unknown function (DUF1178) YP_005028674.1 PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies) YP_005028675.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial YP_005028676.1 PFAM: RNase H YP_005028677.1 PFAM: Methyltransferase domain YP_005028678.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase YP_005028679.1 PFAM: Response regulator receiver domain YP_005028680.1 PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005028681.1 PFAM: RmuC family YP_005028682.1 PFAM: Protein of unknown function (DUF3293) YP_005028683.1 PFAM: PHB de-polymerase C-terminus; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular YP_005028684.1 PFAM: Protein kinase domain YP_005028685.1 PFAM: Transposase YP_005028686.1 PFAM: Resolvase, N terminal domain YP_005028687.1 PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Hg(II)-responsive transcriptional regulator YP_005028688.1 PFAM: MerT mercuric transport protein YP_005028689.1 PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein; mercuric transport protein periplasmic component YP_005028690.1 PFAM: Membrane transport protein MerF YP_005028691.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase YP_005028692.1 TIGRFAM: mercuric resistence transcriptional repressor protein MerD YP_005028693.1 PFAM: MerE protein YP_005028694.1 PFAM: Resolvase, N terminal domain YP_005028695.1 PFAM: TniQ; manually curated YP_005028696.1 PFAM: Bacterial TniB protein YP_005028697.1 PFAM: Mu transposase, C-terminal; Integrase core domain YP_005028698.1 PFAM: Protein of unknown function (DUF1044); manually curated YP_005028699.1 PFAM: Helix-turn-helix YP_005028700.1 PFAM: Integrase core domain YP_005028702.1 PFAM: 4Fe-4S binding domain YP_005028703.1 PFAM: Polysulphide reductase, NrfD YP_005028704.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain YP_005028705.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005028706.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005028708.1 PFAM: MgtC family YP_005028709.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_005028711.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028712.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_005028713.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_005028716.1 PFAM: Helix-turn-helix YP_005028717.1 PFAM: Phage derived protein Gp49-like (DUF891) YP_005028718.1 PFAM: Resolvase, N terminal domain YP_005028719.1 PFAM: Transposase YP_005028720.1 PFAM: Protein kinase domain; HDOD domain YP_005028721.1 TIGRFAM: outer membrane assembly lipoprotein YfiO YP_005028722.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_005028723.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_005028724.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005028725.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005028726.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005028727.1 PFAM: ZIP Zinc transporter YP_005028729.1 PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I YP_005028730.1 PFAM: short chain dehydrogenase; TIGRFAM: acetoacetyl-CoA reductase YP_005028731.1 PFAM: PHB accumulation regulatory domain; PHB/PHA accumulation regulator DNA-binding domain; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR YP_005028732.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_005028733.1 PFAM: Patatin-like phospholipase YP_005028734.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_005028736.1 PFAM: Hsp33 protein YP_005028737.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family YP_005028738.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_005028739.1 PFAM: EAL domain; Cache domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028740.1 PFAM: FliW protein YP_005028741.1 manually curated YP_005028742.1 PFAM: Protein of unknown function (DUF2726); manually curated YP_005028743.1 PFAM: Helix-destabilising protein YP_005028745.1 PFAM: Phage X family; Phage replication protein CRI; TIGRFAM: phage/plasmid replication protein, gene II/X family YP_005028747.1 PFAM: Bacteriophage coat protein B YP_005028749.1 PFAM: Integrase core domain YP_005028750.1 PFAM: IstB-like ATP binding protein YP_005028751.1 PFAM: Protein of unknown function (DUF2523) YP_005028752.1 PFAM: Zonular occludens toxin (Zot) YP_005028753.1 PFAM: Bacterial type II and III secretion system protein YP_005028761.1 PFAM: Protein of unknown function DUF88 YP_005028764.1 PFAM: Type IV secretion-system coupling protein DNA-binding domain; TIGRFAM: conjugative coupling factor TraD, TOL family; conjugative coupling factor TraD, SXT/TOL subfamily YP_005028766.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_005028767.1 TIGRFAM: P-type conjugative transfer protein TrbJ YP_005028769.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family YP_005028771.1 PFAM: Type II/IV secretion system protein YP_005028773.1 PFAM: Protein of unknown function (DUF1528); Putative helicase; TIGRFAM: integrating conjugative element relaxase, PFL_4751 family; manually curated YP_005028774.1 PFAM: SprT-like family; manually curated YP_005028777.1 PFAM: VirB8 protein YP_005028778.1 PFAM: Conjugal transfer protein YP_005028779.1 PFAM: Bacterial conjugation TrbI-like protein YP_005028780.1 PFAM: Conjugal transfer protein YP_005028781.1 PFAM: Bacterial type II and III secretion system protein; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family YP_005028782.1 PFAM: Pilin accessory protein (PilO) YP_005028783.1 PFAM: Type II/IV secretion system protein YP_005028784.1 PFAM: Bacterial type II secretion system protein F domain YP_005028785.1 PFAM: PilS N terminal YP_005028786.1 PFAM: Type II/IV secretion system protein YP_005028787.1 PFAM: Bacterial shufflon protein, N-terminal constant region YP_005028788.1 PFAM: Methyltransferase domain YP_005028789.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_005028792.1 manually curated YP_005028794.1 PFAM: Protein of unknown function (DUF3577) YP_005028797.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005028798.1 PFAM: Transglycosylase SLT domain; manually curated YP_005028800.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_005028802.1 PFAM: Single-strand binding protein family YP_005028805.1 PFAM: Domain of unknown function (DUF1845); TIGRFAM: integrating conjugative element protein, PFL_4669 family YP_005028809.1 PFAM: Putative exonuclease, RdgC YP_005028810.1 PFAM: Helix-turn-helix YP_005028812.1 TIGRFAM: integrating conjugative element, PFGI_1 class, ParB family protein; manually curated YP_005028813.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005028814.1 PFAM: Plasmid replication region DNA-binding N-term; manually curated YP_005028815.1 PFAM: Phage integrase family YP_005028817.1 PFAM: Plasmid replication region DNA-binding N-term YP_005028819.1 PFAM: Copper resistance protein K YP_005028820.1 PFAM: HD domain; manually curated YP_005028821.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_005028825.1 PFAM: Cytochrome c; manually curated YP_005028826.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_005028827.1 PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit YP_005028828.1 PFAM: Outer membrane efflux protein YP_005028829.1 PFAM: Copper binding periplasmic protein CusF YP_005028830.1 PFAM: Protein of unknown function, DUF YP_005028831.1 PFAM: Cytochrome c YP_005028832.1 PFAM: Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_005028833.1 PFAM: Outer membrane efflux protein; manually curated YP_005028834.1 manually curated YP_005028835.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator YP_005028836.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase YP_005028837.1 PFAM: ATPase family associated with various cellular activities (AAA); manually curated YP_005028838.1 PFAM: Subtilase family YP_005028839.1 PFAM: Phage integrase family YP_005028840.1 PFAM: Transposase YP_005028841.1 PFAM: Bacterial extracellular solute-binding protein, family 7 YP_005028842.1 PFAM: Ankyrin repeat YP_005028843.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_005028844.1 PFAM: PilZ domain YP_005028845.1 TIGRFAM: DNA polymerase III, delta' subunit YP_005028846.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_005028847.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_005028848.1 PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ YP_005028849.1 PFAM: Protein of unknown function (DUF833) YP_005028850.1 PFAM: 'Cold-shock' DNA-binding domain YP_005028851.1 PFAM: L,D-transpeptidase catalytic domain YP_005028852.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_005028856.1 PFAM: NmrA-like family YP_005028857.1 PFAM: HxlR-like helix-turn-helix YP_005028858.1 PFAM: Acetyltransferase (GNAT) family YP_005028859.1 PFAM: Bacterial protein of unknown function (DUF839) YP_005028860.1 PFAM: Ankyrin repeat YP_005028861.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_005028862.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_005028864.1 PFAM: Uncharacterised protein family (UPF0125) YP_005028865.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_005028866.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_005028867.1 PFAM: UPF0126 domain YP_005028868.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase YP_005028869.1 PFAM: Domain of unknown function (DUF299) YP_005028870.1 PFAM: SpoU rRNA Methylase family YP_005028871.1 PFAM: Ribonuclease HII YP_005028872.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_005028873.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005028874.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_005028875.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005028876.1 PFAM: Outer membrane protein (OmpH-like) YP_005028877.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_005028878.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_005028879.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005028880.1 PFAM: Cytidylyltransferase family YP_005028881.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_005028882.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_005028883.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_005028884.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_005028885.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_005028886.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_005028887.1 PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase YP_005028888.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_005028889.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_005028890.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_005028891.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_005028892.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_005028893.1 PFAM: ZipA, C-terminal FtsZ-binding domain YP_005028894.1 PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type YP_005028895.1 PFAM: Uncharacterised protein family (UPF0149); SEC-C motif; TIGRFAM: yecA family protein YP_005028896.1 PFAM: Permease family YP_005028897.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_005028898.1 PFAM: EamA-like transporter family YP_005028899.1 PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase YP_005028900.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_005028901.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_005028902.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade YP_005028903.1 PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases YP_005028904.1 PFAM: SPFH domain / Band 7 family YP_005028905.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA YP_005028906.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_005028907.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_005028908.1 PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; manually curated YP_005028909.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_005028910.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_005028911.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication YP_005028912.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_005028913.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_005028914.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_005028915.1 PFAM: ScpA/B protein YP_005028916.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_005028917.1 PFAM: Peptidase family M50 YP_005028918.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_005028919.1 PFAM: PHP domain YP_005028920.1 PFAM: alpha/beta hydrolase fold YP_005028921.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_005028922.1 PFAM: BFD-like [2Fe-2S] binding domain YP_005028923.1 PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein YP_005028924.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_005028925.1 PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating) YP_005028926.1 PFAM: ACT domain YP_005028927.1 PFAM: Biotin-requiring enzyme YP_005028928.1 PFAM: Predicted integral membrane protein (DUF2189) YP_005028929.1 PFAM: PAS fold; TIGRFAM: PAS domain S-box YP_005028930.1 PFAM: Hsp70 protein YP_005028931.1 PFAM: Protein of unknown function, DUF583 YP_005028932.1 PFAM: Protein of unknown function (DUF1236) YP_005028933.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005028934.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_005028935.1 PFAM: Protein of unknown function (DUF817) YP_005028937.1 PFAM: Acyltransferase family YP_005028938.1 PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase YP_005028939.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase YP_005028940.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_005028941.1 PFAM: Domain of unknown function (DUF1854) YP_005028942.1 PFAM: Collagenase; Peptidase family U32 YP_005028943.1 PFAM: SlyX YP_005028944.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_005028945.1 PFAM: Spermine/spermidine synthase YP_005028946.1 PFAM: S-adenosylmethionine-dependent methyltransferase YP_005028947.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_005028948.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_005028950.1 PFAM: Protein of unknown function (DUF3617) YP_005028951.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF YP_005028953.1 PFAM: MgtC family YP_005028954.1 PFAM: Phosphotransferase enzyme family YP_005028955.1 PFAM: Glutaredoxin YP_005028956.1 PFAM: Domain of Unknown Function (DUF748) YP_005028957.1 PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain YP_005028958.1 PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C YP_005028959.1 PFAM: YaeQ protein YP_005028961.1 PFAM: Antibiotic biosynthesis monooxygenase YP_005028962.1 PFAM: Protein of unknown function, DUF479 YP_005028964.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase YP_005028966.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; CHASE domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005028967.1 PFAM: Response regulator receiver domain YP_005028968.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box YP_005028969.1 PFAM: HD domain; Response regulator receiver domain YP_005028970.1 PFAM: Response regulator receiver domain YP_005028972.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial YP_005028973.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial YP_005028974.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase YP_005028975.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_005028976.1 PFAM: Sir2 family YP_005028977.1 PFAM: Transglycosylase SLT domain; MLTD_N; LysM domain YP_005028978.1 PFAM: Major Facilitator Superfamily YP_005028979.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005028980.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005028981.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005028982.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family YP_005028983.1 PFAM: GGDEF domain YP_005028984.1 PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005028985.1 PFAM: EamA-like transporter family; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter YP_005028986.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005028987.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_005028988.1 PFAM: AMP-binding enzyme YP_005028989.1 PFAM: Protein of unknown function (DUF330) YP_005028990.1 PFAM: mce related protein YP_005028991.1 PFAM: ABC transporter YP_005028992.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_005028993.1 PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase YP_005028994.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_005028995.1 PFAM: NADPH-dependent FMN reductase YP_005028996.1 PFAM: ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_005028997.1 PFAM: EamA-like transporter family YP_005028998.1 PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator YP_005028999.1 PFAM: alpha/beta hydrolase fold YP_005029000.1 PFAM: alpha/beta hydrolase fold YP_005029001.1 PFAM: Ion channel; TrkA-N domain YP_005029002.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2062) YP_005029003.1 PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_005029010.1 PFAM: DNA methylase YP_005029013.1 PFAM: Helix-turn-helix YP_005029019.1 manually curated YP_005029020.1 PFAM: Radical SAM superfamily; TIGRFAM: His-Xaa-Ser repeat-associated downstream radical SAM protein YP_005029021.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; His-Xaa-Ser repeat-associated upstream radical SAM protein YP_005029022.1 TIGRFAM: radical SAM pair-associated protein YP_005029024.1 PFAM: IstB-like ATP binding protein YP_005029025.1 PFAM: Archaeal ATPase; manually curated YP_005029026.1 PFAM: Mu transposase, C-terminal; Integrase core domain; manually curated YP_005029028.1 PFAM: Uncharacterised protein family (UPF0153) YP_005029030.1 PFAM: Haemagluttinin repeat; Possible hemagglutinin (DUF638); haemagglutination activity domain; Possible hemagglutinin (DUF637); TIGRFAM: filamentous haemagglutinin family N-terminal domain; adhesin HecA family 20-residue repeat (two copies) YP_005029031.1 PFAM: PPIC-type PPIASE domain YP_005029032.1 PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type; manually curated YP_005029033.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029034.1 PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein YP_005029035.1 PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family YP_005029037.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_005029038.1 PFAM: EamA-like transporter family YP_005029039.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated YP_005029040.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_005029041.1 PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain YP_005029042.1 manually curated YP_005029043.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_005029044.1 PFAM: Rickettsia 17 kDa surface antigen YP_005029045.1 PFAM: Protein of unknown function (DUF752); FAD dependent oxidoreductase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain YP_005029046.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005029047.1 PFAM: Domain of unknown function (DUF897) YP_005029048.1 PFAM: FHA domain YP_005029049.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_005029050.1 PFAM: AhpC/TSA family YP_005029051.1 PFAM: Protein of unknown function (DUF541) YP_005029052.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_005029053.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005029054.1 PFAM: ABC transporter YP_005029055.1 PFAM: Predicted permease YP_005029056.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029057.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase YP_005029058.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase YP_005029059.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH YP_005029060.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC YP_005029061.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase YP_005029062.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; TMAO reductase sytem sensor TorS YP_005029063.1 PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A YP_005029064.1 PFAM: YCII-related domain YP_005029065.1 PFAM: BolA-like protein YP_005029066.1 PFAM: PPIC-type PPIASE domain YP_005029067.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029068.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_005029069.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form YP_005029070.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029071.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029072.1 PFAM: ABC transporter substrate binding protein YP_005029073.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_005029074.1 PFAM: Histone deacetylase domain YP_005029075.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region YP_005029076.1 PFAM: EamA-like transporter family YP_005029077.1 PFAM: Conserved region in glutamate synthase YP_005029078.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_005029080.1 PFAM: Methyltransferase domain YP_005029081.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_005029082.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_005029083.1 PFAM: Uncharacterized conserved protein (DUF2249) YP_005029084.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain YP_005029085.1 PFAM: Aminotransferase class I and II YP_005029086.1 PFAM: Aminotransferase class I and II YP_005029087.1 PFAM: Protein of unknown function (DUF498/DUF598) YP_005029088.1 PFAM: EamA-like transporter family YP_005029089.1 PFAM: Polysaccharide deacetylase YP_005029090.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase) YP_005029091.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_005029092.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: o-succinylbenzoate synthase YP_005029096.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; manually curated YP_005029097.1 PFAM: AMP-binding enzyme YP_005029098.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases YP_005029099.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase YP_005029100.1 PFAM: alpha/beta hydrolase fold YP_005029101.1 PFAM: DUF218 domain YP_005029102.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: propionate--CoA ligase; acetate--CoA ligase YP_005029103.1 PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029104.1 PFAM: NlpC/P60 family YP_005029105.1 PFAM: Bacterial extracellular solute-binding protein YP_005029107.1 PFAM: Outer membrane efflux protein YP_005029110.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_005029112.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit YP_005029114.1 PFAM: NAD(P) transhydrogenase beta subunit YP_005029115.1 manually curated YP_005029119.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005029120.1 PFAM: ABC transporter; TOBE domain YP_005029121.1 PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; manually curated YP_005029123.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_005029124.1 PFAM: Protein of unknown function DUF45 YP_005029125.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005029126.1 PFAM: FecR protein YP_005029127.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_005029129.1 PFAM: outer membrane porin, OprD family YP_005029130.1 PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029131.1 PFAM: Thioesterase superfamily YP_005029132.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM YP_005029133.1 PFAM: Cobalt transport protein component CbiN; TIGRFAM: cobalt transport protein YP_005029134.1 PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ YP_005029135.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit YP_005029136.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase YP_005029137.1 PFAM: CbiX YP_005029138.1 PFAM: Precorrin-8X methylmutase YP_005029139.1 PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD YP_005029140.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit YP_005029141.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase YP_005029142.1 PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G N-terminal YP_005029143.1 PFAM: Cobalamin synthesis G C-terminus YP_005029144.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase YP_005029145.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_005029146.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_005029147.1 PFAM: Uncharacterised protein family (UPF0153) YP_005029148.1 PFAM: Patatin-like phospholipase YP_005029149.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_005029150.1 PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus YP_005029151.1 PFAM: PepSY-associated TM helix YP_005029152.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor YP_005029153.1 PFAM: FecR protein YP_005029154.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005029155.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_005029156.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit YP_005029157.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_005029158.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit YP_005029159.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit YP_005029160.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit YP_005029161.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit YP_005029162.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_005029163.1 PFAM: FIST C domain YP_005029164.1 PFAM: Domain of unknown function (DUF1841) YP_005029165.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box YP_005029166.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_005029167.1 PFAM: GGDEF domain; PAS fold; NMT1/THI5 like; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029168.1 PFAM: VWA domain containing CoxE-like protein YP_005029170.1 PFAM: Phosphoglycerate mutase family YP_005029171.1 PFAM: Protein of unknown function (DUF1415) YP_005029172.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain YP_005029175.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005029176.1 PFAM: HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG YP_005029177.1 PFAM: HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG YP_005029178.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005029179.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_005029180.1 PFAM: CBS domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029181.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB YP_005029182.1 PFAM: Protein of unknown function (DUF3457); TIGRFAM: [NiFe] hydrogenase assembly chaperone, HybE family YP_005029183.1 PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF YP_005029184.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease YP_005029185.1 PFAM: Nickel-dependent hydrogenase YP_005029186.1 PFAM: Polysulphide reductase, NrfD YP_005029187.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_005029188.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA) YP_005029190.1 PFAM: OmpA family YP_005029193.1 PFAM: Protein of unknown function (DUF465) YP_005029194.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_005029195.1 PFAM: alpha/beta hydrolase fold YP_005029196.1 PFAM: Protein of unknown function (DUF3124) YP_005029197.1 PFAM: EamA-like transporter family YP_005029199.1 PFAM: Phosphate transporter family YP_005029200.1 PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein YP_005029202.1 TIGRFAM: hydrogenase maturation protease YP_005029203.1 PFAM: Nickel-dependent hydrogenase YP_005029204.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit YP_005029205.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YP_005029206.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit YP_005029207.1 PFAM: short chain dehydrogenase YP_005029208.1 PFAM: MaoC like domain; Phosphate acetyl/butaryl transferase YP_005029209.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_005029210.1 PFAM: Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_005029211.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029212.1 PFAM: NUDIX domain YP_005029213.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_005029214.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-ubiquinone oxidoreductase chain 4, amino terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_005029215.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_005029216.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_005029217.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_005029218.1 PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_005029219.1 PFAM: NADH dehydrogenase YP_005029220.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G YP_005029221.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit YP_005029222.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_005029223.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit YP_005029224.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C YP_005029225.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_005029226.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_005029227.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_005029228.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_005029229.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_005029230.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC YP_005029231.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate binding protein YP_005029232.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_005029233.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_005029234.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_005029235.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ YP_005029236.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family YP_005029238.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_005029239.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_005029240.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_005029241.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_005029242.1 PFAM: SmpA / OmlA family YP_005029243.1 PFAM: Ferric uptake regulator family YP_005029244.1 PFAM: Uncharacterized protein family UPF0016 YP_005029245.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005029246.1 PFAM: SprA-related family YP_005029247.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_005029248.1 PFAM: ATP-NAD kinase YP_005029249.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_005029250.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_005029251.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_005029253.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029254.1 PFAM: Protein kinase domain; Cyclic nucleotide-binding domain YP_005029255.1 PFAM: GrpE YP_005029256.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_005029257.1 PFAM: DnaJ central domain (4 repeats); DnaJ domain; DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ YP_005029258.1 PFAM: Receptor family ligand binding region YP_005029259.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_005029260.1 PFAM: Tetratricopeptide repeat YP_005029261.1 PFAM: L,D-transpeptidase catalytic domain YP_005029262.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_005029263.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_005029264.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase YP_005029266.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family YP_005029267.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_005029269.1 PFAM: HD domain YP_005029270.1 PFAM: Protein of unknown function (DUF2726) YP_005029271.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005029272.1 PFAM: Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_005029273.1 PFAM: 2OG-Fe(II) oxygenase superfamily; TIGRFAM: DNA alkylation damage repair protein AlkB YP_005029274.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_005029275.1 PFAM: Membrane transport protein YP_005029276.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005029277.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial YP_005029278.1 PFAM: EAL domain; HDOD domain YP_005029279.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029280.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_005029281.1 PFAM: Domain of unknown function DUF123 YP_005029282.1 PFAM: Metallo-beta-lactamase superfamily YP_005029283.1 PFAM: EAL domain; CBS domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029284.1 PFAM: Cytochrome c YP_005029285.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_005029288.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029289.1 PFAM: Cytochrome c oxidase subunit III YP_005029291.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_005029294.1 PFAM: von Willebrand factor type A domain YP_005029295.1 PFAM: Cyclic nucleotide-binding domain YP_005029297.1 PFAM: PAS fold; TIGRFAM: PAS domain S-box YP_005029298.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029299.1 PFAM: Response regulator receiver domain YP_005029300.1 PFAM: Cytochrome c; Cytochrome D1 heme domain YP_005029301.1 PFAM: Radical SAM superfamily; TIGRFAM: heme d1 biosynthesis radical SAM protein NirJ; radical SAM additional 4Fe4S-binding domain YP_005029302.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_005029303.1 PFAM: RNB domain; Ribonuclease B OB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_005029304.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_005029305.1 TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit YP_005029306.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2065) YP_005029307.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein YP_005029308.1 PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein YP_005029309.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain YP_005029310.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_005029311.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_005029312.1 PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL YP_005029313.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2133) YP_005029314.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; manually curated YP_005029315.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_005029317.1 TIGRFAM: type IV pilus biogenesis/stability protein PilW YP_005029318.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_005029319.1 PFAM: Nucleoside diphosphate kinase YP_005029321.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005029322.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_005029323.1 PFAM: Electron transfer flavoprotein domain YP_005029324.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005029325.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005029326.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005029327.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005029328.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005029329.1 PFAM: Sulfite exporter TauE/SafE YP_005029330.1 PFAM: Fatty acid cis/trans isomerase (CTI) YP_005029331.1 PFAM: Sodium:dicarboxylate symporter family YP_005029332.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005029333.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005029334.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029335.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_005029336.1 PFAM: Protein of unknown function (DUF1624) YP_005029337.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029338.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_005029339.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_005029340.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005029341.1 PFAM: FIST C domain; FIST N domain YP_005029342.1 PFAM: Protein of unknown function, DUF YP_005029343.1 PFAM: PilZ domain YP_005029344.1 PFAM: DSBA-like thioredoxin domain YP_005029345.1 PFAM: Metallo-beta-lactamase superfamily YP_005029346.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005029347.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_005029348.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_005029349.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005029350.1 PFAM: ABC transporter YP_005029351.1 PFAM: Predicted permease YP_005029352.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005029353.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005029354.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005029355.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_005029356.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_005029358.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase YP_005029359.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_005029360.1 PFAM: Colicin V production protein YP_005029361.1 PFAM: Sporulation related domain YP_005029362.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_005029363.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_005029364.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_005029365.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_005029366.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_005029367.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_005029368.1 PFAM: Cobalt transport protein YP_005029369.1 TIGRFAM: FimV C-terminal domain; FimV N-terminal domain YP_005029370.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase, gamma-proteobacterial YP_005029371.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_005029372.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_005029373.1 PFAM: Entericidin EcnA/B family YP_005029374.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_005029375.1 PFAM: Peptidase family M48 YP_005029376.1 PFAM: Nucleoside H+ symporter YP_005029377.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_005029378.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_005029379.1 PFAM: Protein of unknown function, DUF YP_005029380.1 PFAM: Ankyrin repeat YP_005029381.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_005029382.1 PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234) YP_005029384.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_005029385.1 PFAM: AMP-binding enzyme YP_005029386.1 PFAM: CBS domain YP_005029387.1 PFAM: UvrD/REP helicase; TIGRFAM: double-strand break repair helicase AddA, alphaproteobacterial type YP_005029389.1 PFAM: Domain of unknown function (DUF3470) YP_005029390.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_005029391.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho YP_005029392.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_005029394.1 PFAM: Cytochrome c YP_005029395.1 PFAM: Exonuclease YP_005029396.1 PFAM: Peptidase family M48 YP_005029397.1 PFAM: Pterin 4 alpha carbinolamine dehydratase YP_005029398.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_005029399.1 PFAM: Protein of unknown function (DUF890) YP_005029400.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type YP_005029401.1 PFAM: MarR family; AsnC family YP_005029402.1 PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region YP_005029403.1 PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF404); Domain of unknown function (DUF407) YP_005029404.1 PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily; Putative amidoligase enzyme (DUF2126) YP_005029405.1 PFAM: ProQ/FINO family YP_005029407.1 PFAM: Proteasome subunit YP_005029408.1 PFAM: Bacterial domain of unknown function (DUF403) YP_005029409.1 PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407) YP_005029410.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029411.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box YP_005029412.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_005029413.1 PFAM: CobD/Cbib protein YP_005029414.1 PFAM: NUDIX domain YP_005029416.1 PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family YP_005029417.1 PFAM: Glutamine amidotransferase class-I YP_005029418.1 PFAM: Protein of unknown function (DUF520) YP_005029419.1 PFAM: Protein of unknown function (DUF1255) YP_005029420.1 PFAM: Protein of unknown function (DUF2788) YP_005029421.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_005029422.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_005029423.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_005029424.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005029426.1 PFAM: Protein of unknown function (DUF3579) YP_005029427.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_005029428.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_005029429.1 PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family YP_005029430.1 PFAM: Aminotransferase class I and II YP_005029431.1 PFAM: Cupin domain YP_005029432.1 PFAM: short chain dehydrogenase YP_005029433.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase YP_005029434.1 PFAM: Phosphofructokinase YP_005029435.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_005029436.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_005029437.1 PFAM: Trm112p-like protein YP_005029438.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_005029439.1 PFAM: Biopolymer transport protein ExbD/TolR YP_005029440.1 PFAM: MotA/TolQ/ExbB proton channel family YP_005029441.1 PFAM: Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_005029442.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_005029444.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_005029445.1 PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein YP_005029446.1 PFAM: Carbonic anhydrase YP_005029448.1 PFAM: HNH endonuclease YP_005029450.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_005029451.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_005029452.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit YP_005029453.1 PFAM: Formate dehydrogenase N, transmembrane; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing YP_005029454.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type YP_005029455.1 PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE YP_005029456.1 PFAM: SEFIR domain YP_005029457.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005029458.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005029459.1 PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE) YP_005029460.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_005029461.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_005029462.1 PFAM: Chorismate lyase YP_005029463.1 PFAM: Uncharacterized ACR, COG1430 YP_005029465.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase YP_005029466.1 PFAM: Isocitrate dehydrogenase kinase/phosphatase (AceK) YP_005029467.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type YP_005029468.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type YP_005029469.1 PFAM: Nitroreductase family YP_005029470.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family YP_005029471.1 PFAM: Redoxin YP_005029472.1 PFAM: ABC-2 type transporter YP_005029473.1 PFAM: NosL YP_005029474.1 PFAM: ABC transporter YP_005029475.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family YP_005029476.1 PFAM: 4Fe-4S binding domain YP_005029477.1 PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies) YP_005029479.1 PFAM: Cytochrome c YP_005029480.1 PFAM: Cytochrome c YP_005029481.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain YP_005029483.1 PFAM: SCO1/SenC YP_005029484.1 PFAM: Protein of unknown function (DUF461) YP_005029486.1 PFAM: Biopolymer transport protein ExbD/TolR YP_005029487.1 PFAM: MotA/TolQ/ExbB proton channel family YP_005029488.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_005029489.1 PFAM: Cytochrome c YP_005029490.1 PFAM: Cytochrome c; Cytochrome D1 heme domain YP_005029491.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_005029492.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_005029493.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_005029494.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_005029495.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_005029496.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_005029497.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_005029498.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_005029499.1 PFAM: Cytochrome C' YP_005029500.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2322) YP_005029502.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase YP_005029503.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_005029504.1 PFAM: Response regulator receiver domain YP_005029505.1 PFAM: EAL domain; GGDEF domain; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029506.1 PFAM: Response regulator receiver domain YP_005029507.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_005029509.1 PFAM: NUDIX domain YP_005029510.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I YP_005029511.1 PFAM: Zinc-finger domain YP_005029512.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II YP_005029513.1 TIGRFAM: conserved hypothetical protein YP_005029515.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_005029516.1 PFAM: EAL domain; HDOD domain YP_005029517.1 PFAM: EAL domain; HDOD domain YP_005029518.1 PFAM: Acetyltransferase (GNAT) family; Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein YP_005029519.1 PFAM: NUDIX domain YP_005029522.1 PFAM: Di-haem cytochrome c peroxidase YP_005029523.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_005029525.1 PFAM: DNA methylase YP_005029526.1 PFAM: Type III restriction enzyme, res subunit YP_005029527.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_005029529.1 PFAM: Calcineurin-like phosphoesterase YP_005029533.1 manually curated YP_005029535.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_005029537.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_005029538.1 PFAM: Bacterial extracellular solute-binding protein YP_005029540.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_005029542.1 PFAM: Aldo/keto reductase family YP_005029544.1 PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_005029545.1 PFAM: Cyclic nucleotide-binding domain YP_005029547.1 PFAM: Aminotransferase class I and II YP_005029548.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325) YP_005029550.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_005029551.1 PFAM: Class II Aldolase and Adducin N-terminal domain YP_005029553.1 PFAM: Universal stress protein family YP_005029554.1 PFAM: Cyclic nucleotide-binding domain YP_005029555.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family YP_005029556.1 PFAM: Protein of unknown function (DUF1504) YP_005029557.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005029558.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; MASE1 YP_005029560.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_005029562.1 PFAM: Peptidase C26 YP_005029563.1 PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: carboxylate-amine ligase, YbdK family YP_005029564.1 PFAM: Sodium/hydrogen exchanger family YP_005029565.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_005029566.1 PFAM: Major Facilitator Superfamily YP_005029567.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005029568.1 PFAM: Protein of unknown function (DUF1780) YP_005029569.1 PFAM: Integrase core domain YP_005029572.1 PFAM: Putative modulator of DNA gyrase YP_005029573.1 PFAM: Carbon-nitrogen hydrolase YP_005029574.1 TIGRFAM: TIGR02099 family protein YP_005029575.1 PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase YP_005029577.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_005029578.1 PFAM: Methyltransferase small domain YP_005029581.1 PFAM: Protein phosphatase 2C YP_005029583.1 PFAM: HDOD domain YP_005029584.1 PFAM: Cysteine-rich domain YP_005029585.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_005029586.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_005029587.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005029589.1 PFAM: Sulfite exporter TauE/SafE YP_005029590.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005029591.1 PFAM: MOFRL family YP_005029592.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_005029593.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hydroxypyruvate isomerase YP_005029594.1 PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase YP_005029595.1 PFAM: Endoribonuclease L-PSP YP_005029596.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_005029597.1 PFAM: Isochorismatase family YP_005029598.1 PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005029599.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_005029600.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_005029601.1 PFAM: Protein of unknown function (DUF3240) YP_005029602.1 PFAM: Outer membrane efflux protein YP_005029603.1 PFAM: Acetyltransferase (GNAT) family YP_005029604.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2084) YP_005029606.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase YP_005029607.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029608.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase YP_005029609.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029610.1 PFAM: Protein of unknown function (DUF2892) YP_005029611.1 PFAM: AcrB/AcrD/AcrF family; manually curated YP_005029612.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005029613.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005029614.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_005029616.1 PFAM: UbiA prenyltransferase family YP_005029617.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005029618.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005029619.1 PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005029620.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain YP_005029621.1 PFAM: Major Facilitator Superfamily YP_005029622.1 PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain YP_005029623.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_005029624.1 PFAM: Phosphatidylethanolamine-binding protein YP_005029625.1 PFAM: HAMP domain YP_005029627.1 PFAM: K+ potassium transporter; TIGRFAM: potassium uptake protein YP_005029628.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC YP_005029629.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD YP_005029630.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE YP_005029632.1 PFAM: NMT1/THI5 like YP_005029633.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005029634.1 PFAM: ABC transporter YP_005029635.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005029636.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase YP_005029637.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005029638.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain YP_005029639.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005029640.1 PFAM: Response regulator receiver domain; manually curated YP_005029641.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029642.1 PFAM: Response regulator receiver domain YP_005029643.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_005029644.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_005029645.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_005029646.1 PFAM: CheW-like domain YP_005029647.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005029649.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_005029650.1 PFAM: Major Facilitator Superfamily YP_005029651.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase YP_005029652.1 PFAM: Sodium:dicarboxylate symporter family YP_005029653.1 PFAM: GlpM protein; manually curated YP_005029654.1 PFAM: Sulfite exporter TauE/SafE YP_005029655.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005029656.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005029657.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_005029658.1 PFAM: Type II transport protein GspH; manually curated YP_005029662.1 PFAM: Neisseria PilC protein YP_005029663.1 PFAM: Gram-negative bacterial tonB protein YP_005029664.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_005029665.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_005029666.1 PFAM: Oxidoreductase molybdopterin binding domain YP_005029667.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_005029668.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_005029669.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_005029670.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes YP_005029671.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_005029672.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_005029673.1 PFAM: Domain of unknown function (DUF1992) YP_005029674.1 PFAM: Rhodanese-like domain YP_005029675.1 PFAM: Protein of unknown function (DUF3478) YP_005029676.1 PFAM: EamA-like transporter family YP_005029677.1 PFAM: Rieske [2Fe-2S] domain YP_005029678.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_005029679.1 PFAM: Polyprenyl synthetase YP_005029680.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_005029681.1 PFAM: Uncharacterized ACR, COG1469 YP_005029682.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_005029683.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_005029684.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_005029685.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_005029687.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_005029688.1 PFAM: Predicted membrane protein (DUF2069) YP_005029689.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_005029690.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_005029691.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005029692.1 PFAM: Outer membrane efflux protein YP_005029693.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005029694.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor kinase N-terminal YP_005029695.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_005029696.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein YP_005029697.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_005029698.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_005029699.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_005029700.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; manually curated; non-canonical start codon YP_005029701.1 PFAM: Protein of unknown function (DUF3619) YP_005029702.1 PFAM: Protein of unknown function (DUF3106) YP_005029703.1 PFAM: RDD family YP_005029704.1 PFAM: Predicted permease YjgP/YjgQ family YP_005029705.1 PFAM: Predicted permease YjgP/YjgQ family YP_005029706.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_005029707.1 PFAM: DNA polymerase III chi subunit, HolC YP_005029709.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; IMG reference gene:2508709541_SP