-- dump date 20240506_040621 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP042593.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP042593.1.REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: NoREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0xREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford NanoporeREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56 Pseudo Genes (ambiguous residues) :: 0 of 56REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56 Pseudo Genes (ambiguous residues) :: 0 of 56 Pseudo Genes (frameshifted) :: 22 of 56REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56 Pseudo Genes (ambiguous residues) :: 0 of 56 Pseudo Genes (frameshifted) :: 22 of 56 Pseudo Genes (incomplete) :: 43 of 56REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56 Pseudo Genes (ambiguous residues) :: 0 of 56 Pseudo Genes (frameshifted) :: 22 of 56 Pseudo Genes (incomplete) :: 43 of 56 Pseudo Genes (internal stop) :: 11 of 56REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56 Pseudo Genes (ambiguous residues) :: 0 of 56 Pseudo Genes (frameshifted) :: 22 of 56 Pseudo Genes (incomplete) :: 43 of 56 Pseudo Genes (internal stop) :: 11 of 56 Pseudo Genes (multiple problems) :: 18 of 56REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56 Pseudo Genes (ambiguous residues) :: 0 of 56 Pseudo Genes (frameshifted) :: 22 of 56 Pseudo Genes (incomplete) :: 43 of 56 Pseudo Genes (internal stop) :: 11 of 56 Pseudo Genes (multiple problems) :: 18 of 56 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP042593.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2.3 Genome Representation :: Full Expected Final Version :: No Genome Coverage :: 120.0x Sequencing Technology :: Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/17/2023 09:27:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,667 CDSs (total) :: 4,521 Genes (coding) :: 4,465 CDSs (with protein) :: 4,465 Genes (RNA) :: 146 rRNAs :: 11, 11, 11 (5S, 16S, 23S) complete rRNAs :: 11, 11, 11 (5S, 16S, 23S) tRNAs :: 107 ncRNAs :: 6 Pseudo Genes (total) :: 56 CDSs (without protein) :: 56 Pseudo Genes (ambiguous residues) :: 0 of 56 Pseudo Genes (frameshifted) :: 22 of 56 Pseudo Genes (incomplete) :: 43 of 56 Pseudo Genes (internal stop) :: 11 of 56 Pseudo Genes (multiple problems) :: 18 of 56 ##Genome-Annotation-Data-END## COMPLETENESS: full length.